BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15039
(622 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 197/328 (60%), Gaps = 17/328 (5%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
Y++ +++G+ F +L +V L+++K T + + V++ NL+ ++E + L E+ + HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 71 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG 130
NI+ Y ++F+ +L +V+ M +GS KDLI HF G+ EL I +ILQ VL L+YIH
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 131 KGFIHRAVKASHILISHNGKACLSGLR---YMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 187
G++HR+VKASHILIS +GK LSGLR M ++ VH FP + L WLSPEV
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 206
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVD 247
L+QNL GYD +SDIYSVGI+ CELANG VPF + P T ML+EKL G P LLD +T +
Sbjct: 207 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 266
Query: 248 T-GQDDGEENACSYISEQQTQVLTS------------RKFSDSFHSIVELCLSRDVDKRP 294
A S +S+ T R FS FH VE CL R+ D RP
Sbjct: 267 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 326
Query: 295 LACNLLQHAFFKQTK-KCSVMLPELLRP 321
A LL H+FFKQ K + S LPELLRP
Sbjct: 327 SASTLLNHSFFKQIKRRASEALPELLRP 354
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 157/236 (66%), Gaps = 3/236 (1%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
Y++ +++G+ F +L +V L+++K T + + V++ NL+ ++E + L E+ + HP
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86
Query: 421 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG 480
NI+ Y ++F+ +L +V+ M +GS KDLI HF G+ EL I +ILQ VL L+YIH
Sbjct: 87 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 146
Query: 481 KGFIHRAVKASHILISHNGKACLSGLR---YMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 537
G++HR+VKASHILIS +GK LSGLR M ++ VH FP + L WLSPEV
Sbjct: 147 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 206
Query: 538 LEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTT 593
L+QNL GYD +SDIYSVGI+ CELANG VPF + P T ML+EKL G P LLD +T
Sbjct: 207 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 197/328 (60%), Gaps = 17/328 (5%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
Y++ +++G+ F +L +V L+++K T + + V++ NL+ ++E + L E+ + HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 71 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG 130
NI+ Y ++F+ +L +V+ M +GS KDLI HF G+ EL I +ILQ VL L+YIH
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 131 KGFIHRAVKASHILISHNGKACLSGLR---YMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 187
G++HR+VKASHILIS +GK LSGLR M ++ VH FP + L WLSPEV
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 190
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVD 247
L+QNL GYD +SDIYSVGI+ CELANG VPF + P T ML+EKL G P LLD +T +
Sbjct: 191 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 250
Query: 248 T-GQDDGEENACSYISEQQTQVLTS------------RKFSDSFHSIVELCLSRDVDKRP 294
A S +S+ T R FS FH VE CL R+ D RP
Sbjct: 251 ELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 310
Query: 295 LACNLLQHAFFKQTK-KCSVMLPELLRP 321
A LL H+FFKQ K + S LPELLRP
Sbjct: 311 SASTLLNHSFFKQIKRRASEALPELLRP 338
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/236 (47%), Positives = 157/236 (66%), Gaps = 3/236 (1%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
Y++ +++G+ F +L +V L+++K T + + V++ NL+ ++E + L E+ + HP
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 70
Query: 421 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG 480
NI+ Y ++F+ +L +V+ M +GS KDLI HF G+ EL I +ILQ VL L+YIH
Sbjct: 71 NIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH 130
Query: 481 KGFIHRAVKASHILISHNGKACLSGLR---YMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 537
G++HR+VKASHILIS +GK LSGLR M ++ VH FP + L WLSPEV
Sbjct: 131 MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEV 190
Query: 538 LEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTT 593
L+QNL GYD +SDIYSVGI+ CELANG VPF + P T ML+EKL G P LLD +T
Sbjct: 191 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 246
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 140/281 (49%), Gaps = 38/281 (13%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K+ NL++ + L EI M HPNI+ Y +SF+ +L LV L+ GS
Sbjct: 43 VAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 99 DLI------NAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
D+I H + L E I IL++VL GLEY+H G IHR VKA +IL+ +G
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ 161
Query: 153 LSGLRYMCPFSP----TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISC 208
++ + T+ KV T W++PEV+EQ + GYD ++DI+S GI+
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFVGTPC---WMAPEVMEQ-VRGYDFKADIWSFGITA 217
Query: 209 CELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQV 268
ELA G P+ + P +L+ L P L +TG D E
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDPPSL--------ETGVQDKE-------------- 255
Query: 269 LTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTK 309
+K+ SF ++ LCL +D +KRP A LL+H FF++ K
Sbjct: 256 -MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 23/226 (10%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K+ NL++ + L EI M HPNI+ Y +SF+ +L LV L+ GS
Sbjct: 43 VAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 449 DLI------NAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
D+I H + L E I IL++VL GLEY+H G IHR VKA +IL+ +G
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ 161
Query: 503 LSGLRYMCPFSP----TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISC 558
++ + T+ KV T W++PEV+EQ + GYD ++DI+S GI+
Sbjct: 162 IADFGVSAFLATGGDITRNKVRKTFVGTPC---WMAPEVMEQ-VRGYDFKADIWSFGITA 217
Query: 559 CELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGE 604
ELA G P+ + P +L+ L P L +TG D E
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDPPSL--------ETGVQDKE 255
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 141/284 (49%), Gaps = 38/284 (13%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFG 95
+ +A+K+ NL++ + L EI M HPNI+ Y +SF+ +L LV L+ G
Sbjct: 35 KEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 96 SCKDLI------NAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG 149
S D+I H + L E I IL++VL GLEY+H G IHR VKA +IL+ +G
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG 153
Query: 150 KACLSGLRYMCPFSP----TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 205
++ + T+ KV T W++PEV+EQ + GYD ++DI+S G
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPC---WMAPEVMEQ-VRGYDFKADIWSFG 209
Query: 206 ISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQ 265
I+ ELA G P+ + P +L+ L P L +TG D E
Sbjct: 210 ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL--------ETGVQDKE----------- 250
Query: 266 TQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTK 309
+K+ SF ++ LCL +D +KRP A LL+H FF++ K
Sbjct: 251 ----MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 23/229 (10%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFG 445
+ +A+K+ NL++ + L EI M HPNI+ Y +SF+ +L LV L+ G
Sbjct: 35 KEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 446 SCKDLI------NAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG 499
S D+I H + L E I IL++VL GLEY+H G IHR VKA +IL+ +G
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG 153
Query: 500 KACLSGLRYMCPFSP----TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 555
++ + T+ KV T W++PEV+EQ + GYD ++DI+S G
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPC---WMAPEVMEQ-VRGYDFKADIWSFG 209
Query: 556 ISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGE 604
I+ ELA G P+ + P +L+ L P L +TG D E
Sbjct: 210 ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL--------ETGVQDKE 250
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 53/309 (17%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
+ + LG+ + SVY + HK T Q++A+K+ ++ DL+ + EI M+ P
Sbjct: 31 FDVLEKLGE--GSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSP 84
Query: 71 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG 130
+++ Y S+ TDL +V G GS D+I N L E I ILQ L GLEY+H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHF 143
Query: 131 KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
IHR +KA +IL++ G A L+ G+ K+ + P W++PEV+
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF------WMAPEVI 197
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDT 248
++ GY+ +DI+S+GI+ E+A G P+A+ + P
Sbjct: 198 QEI--GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP------------ 243
Query: 249 GQDDGEENACSYISEQQTQVLTSRK---FSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T RK +SD+F V+ CL + ++R A LLQH F
Sbjct: 244 ---------------------TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
Query: 306 KQTKKCSVM 314
+ K S++
Sbjct: 283 RSAKGVSIL 291
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 17/212 (8%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
+ + LG+ + SVY + HK T Q++A+K+ ++ DL+ + EI M+ P
Sbjct: 31 FDVLEKLGE--GSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSP 84
Query: 421 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG 480
+++ Y S+ TDL +V G GS D+I N L E I ILQ L GLEY+H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHF 143
Query: 481 KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
IHR +KA +IL++ G A L+ G+ K+ + P W++PEV+
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPF------WMAPEVI 197
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
++ GY+ +DI+S+GI+ E+A G P+A+
Sbjct: 198 QEI--GYNCVADIWSLGITAIEMAEGKPPYAD 227
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
+VY + T Q +A+++ NL + ++L + +EI+ MR ++PNI+ Y+ S+L +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L +V + GS D++ + E I + ++ L LE++H IHR +K+ +IL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ +G L+ + +P + K T Y W++PEV+ + Y + DI+S+
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPY---WMAPEVVTRK--AYGPKVDIWSL 202
Query: 205 GISCCELANGTVPFA-ETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 263
GI E+ G P+ E P + + G TP L +
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQN----------------------- 238
Query: 264 QQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S F + CL DV+KR A LLQH F K K S + P
Sbjct: 239 -------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 350 SVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH 409
S+ ++ + Y +GQ + +VY + T Q +A+++ NL + ++L + +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGAS--GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IIN 66
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI+ MR ++PNI+ Y+ S+L +L +V + GS D++ + E I + +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCR 123
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
+ L LE++H IHR +K+ +IL+ +G L+ + +P + K T Y
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPY- 181
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
W++PEV+ + Y + DI+S+GI E+ G P+
Sbjct: 182 --WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
+VY + T Q +A+++ NL + ++L + +EI+ MR ++PNI+ Y+ S+L +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L +V + GS D++ + E I + ++ L LE++H IHR +K+ +IL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ +G L+ + +P + K T Y W++PEV+ + Y + DI+S+
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPY---WMAPEVVTRK--AYGPKVDIWSL 202
Query: 205 GISCCELANGTVPFA-ETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 263
GI E+ G P+ E P + + G TP L +
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQN----------------------- 238
Query: 264 QQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S F + CL DV+KR A LLQH F K K S + P
Sbjct: 239 -------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 350 SVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH 409
S+ ++ + Y +GQ + +VY + T Q +A+++ NL + ++L + +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGAS--GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IIN 66
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI+ MR ++PNI+ Y+ S+L +L +V + GS D++ + E I + +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCR 123
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
+ L LE++H IHR +K+ +IL+ +G L+ + +P + K T Y
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPY- 181
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
W++PEV+ + Y + DI+S+GI E+ G P+
Sbjct: 182 --WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
+VY + T Q +A+++ NL + ++L + +EI+ MR ++PNI+ Y+ S+L +
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDE 91
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L +V + GS D++ + E I + ++ L LE++H IHR +K+ +IL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ +G L+ + +P + K T Y W++PEV+ + Y + DI+S+
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPY---WMAPEVVTRK--AYGPKVDIWSL 202
Query: 205 GISCCELANGTVPFA-ETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 263
GI E+ G P+ E P + + G TP L +
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQN----------------------- 238
Query: 264 QQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S F + CL DV+KR A LLQH F K K S + P
Sbjct: 239 -------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 350 SVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH 409
S+ ++ + Y +GQ + +VY + T Q +A+++ NL + ++L + +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGAS--GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IIN 66
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI+ MR ++PNI+ Y+ S+L +L +V + GS D++ + E I + +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCR 123
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
+ L LE++H IHR +K+ +IL+ +G L+ + +P + K T Y
Sbjct: 124 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPY- 181
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
W++PEV+ + Y + DI+S+GI E+ G P+
Sbjct: 182 --WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
+VY + T Q +A+++ NL + ++L + +EI+ MR ++PNI+ Y+ S+L +
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDE 92
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L +V + GS D++ + E I + ++ L LE++H IHR +K+ +IL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNIL 149
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ +G L+ + +P + K T Y W++PEV+ + Y + DI+S+
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPY---WMAPEVVTRK--AYGPKVDIWSL 203
Query: 205 GISCCELANGTVPFA-ETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 263
GI E+ G P+ E P + + G TP L +
Sbjct: 204 GIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQN----------------------- 239
Query: 264 QQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S F + CL DV+KR A L+QH F K K S + P
Sbjct: 240 -------PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
+VY + T Q +A+++ NL + ++L + +EI+ MR ++PNI+ Y+ S+L +
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDE 92
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
L +V + GS D++ + E I + ++ L LE++H IHR +K+ +IL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNIL 149
Query: 495 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
+ +G L+ + +P + K T Y W++PEV+ + Y + DI+S+
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPY---WMAPEVVTRK--AYGPKVDIWSL 203
Query: 555 GISCCELANGTVPF 568
GI E+ G P+
Sbjct: 204 GIMAIEMIEGEPPY 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
+VY + T Q +A+++ NL + ++L + +EI+ MR ++PNI+ Y+ S+L +
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLVGDE 92
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L +V + GS D++ + E I + ++ L LE++H IHR +K+ +IL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNIL 149
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ +G L+ + +P + K T Y W++PEV+ + Y + DI+S+
Sbjct: 150 LGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPY---WMAPEVVTRK--AYGPKVDIWSL 203
Query: 205 GISCCELANGTVPFA-ETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 263
GI E+ G P+ E P + + G TP L +
Sbjct: 204 GIMAIEMIEGEPPYLNENPLRALYLIATNG-TPELQN----------------------- 239
Query: 264 QQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S F + CL DV+KR A L+QH F K K S + P
Sbjct: 240 -------PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTP 285
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 350 SVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH 409
S+ ++ + Y +GQ + +VY + T Q +A+++ NL + ++L + +
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGAS--GTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IIN 67
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI+ MR ++PNI+ Y+ S+L +L +V + GS D++ + E I + +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCR 124
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
+ L LE++H IHR +K+ +IL+ +G L+ + +P + K T Y
Sbjct: 125 ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPY- 182
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
W++PEV+ + Y + DI+S+GI E+ G P+
Sbjct: 183 --WMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 142/299 (47%), Gaps = 44/299 (14%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
+ VY T +++A+K +L+ DE ++ + EI + P I Y S+L
Sbjct: 30 GSFGEVYKGIDNHTKEVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYITRYFGSYLK 88
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
+T L ++ +G GS DL+ L E I IL+++L GL+Y+H + IHR +KA+
Sbjct: 89 STKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAA 145
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
++L+S G L+ + T+ K + F T + W++PEV++Q+ YD ++DI
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLTDTQIKRNXF-VGTPF---WMAPEVIKQS--AYDFKADI 199
Query: 202 YSVGISCCELANGTVPFAET-PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
+S+GI+ ELA G P ++ P ++ + + +P L+ GQ
Sbjct: 200 WSLGITAIELAKGEPPNSDLHPMRVLFL--IPKNSPPTLE--------GQH--------- 240
Query: 261 ISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
S F VE CL++D RP A LL+H F + K + L EL+
Sbjct: 241 --------------SKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELI 285
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
+ VY T +++A+K +L+ DE ++ + EI + P I Y S+L
Sbjct: 30 GSFGEVYKGIDNHTKEVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYITRYFGSYLK 88
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
+T L ++ +G GS DL+ L E I IL+++L GL+Y+H + IHR +KA+
Sbjct: 89 STKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAA 145
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
++L+S G L+ + T+ K + F T + W++PEV++Q+ YD ++DI
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLTDTQIKRNXF-VGTPF---WMAPEVIKQS--AYDFKADI 199
Query: 552 YSVGISCCELANGTVP 567
+S+GI+ ELA G P
Sbjct: 200 WSLGITAIELAKGEPP 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 46/287 (16%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T Q++A+K +L+ DE ++ + EI + + Y S+L + L ++ +G
Sbjct: 47 TQQVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGG 105
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
GS DL+ A E I +L+++L GL+Y+H + IHR +KA+++L+S G L+
Sbjct: 106 GSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLA 162
Query: 155 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 214
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 163 DFGVAGQLTDTQIKRNTF-VGTPF---WMAPEVIQQS--AYDSKADIWSLGITAIELAKG 216
Query: 215 TVPFAET--PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSR 272
P ++ L LI K N + + +
Sbjct: 217 EPPNSDMHPMRVLFLIPK------------------------NNPPTLVGD--------- 243
Query: 273 KFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
F+ SF ++ CL++D RP A LL+H F + K + L EL+
Sbjct: 244 -FTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELI 289
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 10/183 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T Q++A+K +L+ DE ++ + EI + + Y S+L + L ++ +G
Sbjct: 47 TQQVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGG 105
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
GS DL+ A E I +L+++L GL+Y+H + IHR +KA+++L+S G L+
Sbjct: 106 GSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLA 162
Query: 505 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 163 DFGVAGQLTDTQIKRNTF-VGTPF---WMAPEVIQQS--AYDSKADIWSLGITAIELAKG 216
Query: 565 TVP 567
P
Sbjct: 217 EPP 219
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 44/286 (15%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 51 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 109
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 110 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 166
Query: 155 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 214
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 167 DFGVAGQLTDTQIKRNTF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 220
Query: 215 TVPFAET-PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRK 273
P +E P ++ + + P L+
Sbjct: 221 EPPHSELHPMKVLFL--IPKNNPPTLEGN------------------------------- 247
Query: 274 FSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
+S VE CL+++ RP A LL+H F + K + L EL+
Sbjct: 248 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 293
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 10/186 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 51 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 109
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 110 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 166
Query: 505 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 167 DFGVAGQLTDTQIKRNTF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 220
Query: 565 TVPFAE 570
P +E
Sbjct: 221 EPPHSE 226
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 44/286 (15%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 31 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 89
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 90 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
Query: 155 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 214
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 147 DFGVAGQLTDTQIKRNXF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 200
Query: 215 TVPFAET-PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRK 273
P +E P ++ + + P L+
Sbjct: 201 EPPHSELHPMKVLFL--IPKNNPPTLEGN------------------------------- 227
Query: 274 FSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
+S VE CL+++ RP A LL+H F + K + L EL+
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 273
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 10/186 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 31 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 89
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 90 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
Query: 505 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 147 DFGVAGQLTDTQIKRNXF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 200
Query: 565 TVPFAE 570
P +E
Sbjct: 201 EPPHSE 206
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 44/286 (15%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 46 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 104
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 105 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 161
Query: 155 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 214
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 162 DFGVAGQLTDTQIKRNXF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 215
Query: 215 TVPFAET-PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRK 273
P +E P ++ + + P L+
Sbjct: 216 EPPHSELHPMKVLFL--IPKNNPPTLEGN------------------------------- 242
Query: 274 FSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
+S VE CL+++ RP A LL+H F + K + L EL+
Sbjct: 243 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 288
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 10/186 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 46 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 104
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 105 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 161
Query: 505 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 162 DFGVAGQLTDTQIKRNXF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 215
Query: 565 TVPFAE 570
P +E
Sbjct: 216 EPPHSE 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 44/286 (15%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 31 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 89
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 90 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
Query: 155 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 214
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 147 DFGVAGQLTDTQIKRNTF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 200
Query: 215 TVPFAET-PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRK 273
P +E P ++ + + P L+
Sbjct: 201 EPPHSELHPMKVLFL--IPKNNPPTLEGN------------------------------- 227
Query: 274 FSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
+S VE CL+++ RP A LL+H F + K + L EL+
Sbjct: 228 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELI 273
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 10/186 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T +++A+K +L+ DE ++ + EI + P + Y S+L T L ++ +G
Sbjct: 31 TQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 89
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
GS DL+ L E I IL+++L GL+Y+H + IHR +KA+++L+S +G+ L+
Sbjct: 90 GSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA 146
Query: 505 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+ T+ K + F T + W++PEV++Q+ YD ++DI+S+GI+ ELA G
Sbjct: 147 DFGVAGQLTDTQIKRNTF-VGTPF---WMAPEVIKQS--AYDSKADIWSLGITAIELARG 200
Query: 565 TVPFAE 570
P +E
Sbjct: 201 EPPHSE 206
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 142/323 (43%), Gaps = 43/323 (13%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLD-RMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL 80
+ +VY ++ ++++A+KK + + ++E + + E+ ++ LRHPN I Y +L
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 81 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
LV GS DL+ H L E+ I + L GL Y+H IHR VKA
Sbjct: 125 REHTAWLVMEYC-LGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 182
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG-YDERS 199
+IL+S G L +P V T Y W++PEV+ +G YD +
Sbjct: 183 GNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPY---WMAPEVILAMDEGQYDGKV 234
Query: 200 DIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACS 259
D++S+GI+C ELA P L + +A
Sbjct: 235 DVWSLGITCIELAE--------------------RKPPLFNMNAM-----------SALY 263
Query: 260 YISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
+I++ ++ L S +S+ F + V+ CL + RP + LL+H F + + +V++ +
Sbjct: 264 HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQ 323
Query: 320 RPALSLNESNVCEINNELECMFN 342
R ++ E + + + +F
Sbjct: 324 RTKDAVRELDNLQYRKMKKILFQ 346
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLD-RMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL 430
+ +VY ++ ++++A+KK + + ++E + + E+ ++ LRHPN I Y +L
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 431 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
LV GS DL+ H L E+ I + L GL Y+H IHR VKA
Sbjct: 125 REHTAWLVMEYC-LGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 182
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG-YDERS 549
+IL+S G L +P V T Y W++PEV+ +G YD +
Sbjct: 183 GNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPY---WMAPEVILAMDEGQYDGKV 234
Query: 550 DIYSVGISCCELANGTVPF 568
D++S+GI+C ELA P
Sbjct: 235 DVWSLGITCIELAERKPPL 253
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 142/323 (43%), Gaps = 43/323 (13%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLD-RMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL 80
+ +VY ++ ++++A+KK + + ++E + + E+ ++ LRHPN I Y +L
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 81 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
LV GS DL+ H L E+ I + L GL Y+H IHR VKA
Sbjct: 86 REHTAWLVMEYC-LGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 143
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG-YDERS 199
+IL+S G L +P V T Y W++PEV+ +G YD +
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPY---WMAPEVILAMDEGQYDGKV 195
Query: 200 DIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACS 259
D++S+GI+C ELA P L + +A
Sbjct: 196 DVWSLGITCIELAE--------------------RKPPLFNMNAM-----------SALY 224
Query: 260 YISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
+I++ ++ L S +S+ F + V+ CL + RP + LL+H F + + +V++ +
Sbjct: 225 HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQ 284
Query: 320 RPALSLNESNVCEINNELECMFN 342
R ++ E + + + +F
Sbjct: 285 RTKDAVRELDNLQYRKMKKILFQ 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLD-RMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL 430
+ +VY ++ ++++A+KK + + ++E + + E+ ++ LRHPN I Y +L
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 431 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
LV GS DL+ H L E+ I + L GL Y+H IHR VKA
Sbjct: 86 REHTAWLVMEYC-LGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 143
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG-YDERS 549
+IL+S G L +P V T Y W++PEV+ +G YD +
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPY---WMAPEVILAMDEGQYDGKV 195
Query: 550 DIYSVGISCCELANGTVPF 568
D++S+GI+C ELA P
Sbjct: 196 DVWSLGITCIELAERKPPL 214
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 127/292 (43%), Gaps = 48/292 (16%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDAT 83
VY +H T QL A+K ++ +E++K EI + ++ H NI Y +F+
Sbjct: 38 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSHHRNIATYYGAFIKKN 94
Query: 84 ------DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRA 137
L LV G GS DLI L E I +I +++L GL ++H IHR
Sbjct: 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRD 154
Query: 138 VKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL--EQNLDG- 194
+K ++L++ N + L T + + F T Y W++PEV+ ++N D
Sbjct: 155 IKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPY---WMAPEVIACDENPDAT 210
Query: 195 YDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGE 254
YD +SD++S+GI+ E+A G P C + +
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAPPL----------------------CDMHPM-------- 240
Query: 255 ENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFK 306
A I L S+K+S F S +E CL ++ +RP L++H F +
Sbjct: 241 -RALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDAT 433
VY +H T QL A+K ++ +E++K EI + ++ H NI Y +F+
Sbjct: 38 GQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK---QEINMLKKYSHHRNIATYYGAFIKKN 94
Query: 434 ------DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRA 487
L LV G GS DLI L E I +I +++L GL ++H IHR
Sbjct: 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRD 154
Query: 488 VKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL--EQNLDG- 544
+K ++L++ N + L T + + F T Y W++PEV+ ++N D
Sbjct: 155 IKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF-IGTPY---WMAPEVIACDENPDAT 210
Query: 545 YDERSDIYSVGISCCELANGTVPF 568
YD +SD++S+GI+ E+A G P
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 140/309 (45%), Gaps = 56/309 (18%)
Query: 29 LSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLV 88
L++ K + + +AVK +L + +L L +E+V MR +H N++ S+L +L ++
Sbjct: 63 LAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVL 120
Query: 89 SPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN 148
+ G+ D+++ L E I + + VL L Y+H +G IHR +K+ IL++ +
Sbjct: 121 MEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD 177
Query: 149 GKACLSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 205
G+ LS + S P +K + T Y W++PEV+ ++L Y DI+S+G
Sbjct: 178 GRVKLSDFGFCAQISKDVPKRKXL----VGTPY---WMAPEVISRSL--YATEVDIWSLG 228
Query: 206 ISCCELANGTVP-FAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQ 264
I E+ +G P F+++P M ++L + P L
Sbjct: 229 IMVIEMVDGEPPYFSDSPVQAM--KRLRDSPPPKLK------------------------ 262
Query: 265 QTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELLRPALS 324
S K S +E L RD +R A LL H F QT LPE L P +
Sbjct: 263 -----NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG-----LPECLVPLIQ 312
Query: 325 L--NESNVC 331
L +++ C
Sbjct: 313 LYRKQTSTC 321
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 18/202 (8%)
Query: 379 LSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLV 438
L++ K + + +AVK +L + +L L +E+V MR +H N++ S+L +L ++
Sbjct: 63 LAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVL 120
Query: 439 SPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN 498
+ G+ D+++ L E I + + VL L Y+H +G IHR +K+ IL++ +
Sbjct: 121 MEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD 177
Query: 499 GKACLSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 555
G+ LS + S P +K + T Y W++PEV+ ++L Y DI+S+G
Sbjct: 178 GRVKLSDFGFCAQISKDVPKRKXL----VGTPY---WMAPEVISRSL--YATEVDIWSLG 228
Query: 556 ISCCELANGTVP-FAETPTTLM 576
I E+ +G P F+++P M
Sbjct: 229 IMVIEMVDGEPPYFSDSPVQAM 250
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 42/309 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
V+ + + T +IAVK+ +E+ + L V ++ P I+ +F+ TD
Sbjct: 39 GQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD 98
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHI 143
+ + LMG +C + + +PE ++ + ++ L Y+ K G IHR VK S+I
Sbjct: 99 VFIAMELMG--TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 156
Query: 144 LISHNGKACLSGLRYMCPFSPTKKKVH-LFPPSTAYNLNWLSPEVLEQ---NLDGYDERS 199
L+ G+ L C F + + V +A +++PE ++ YD R+
Sbjct: 157 LLDERGQIKL------CDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA 210
Query: 200 DIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACS 259
D++S+GIS ELA G P+ T ++ K+ P LL
Sbjct: 211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM---------------- 254
Query: 260 YISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELL 319
FS F S V+ CL++D KRP LL+H+F K+ + V +
Sbjct: 255 -------------GFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWF 301
Query: 320 RPALSLNES 328
+ ++ ES
Sbjct: 302 KDVMAKTES 310
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 13/220 (5%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
V+ + + T +IAVK+ +E+ + L V ++ P I+ +F+ TD
Sbjct: 39 GQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD 98
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHI 493
+ + LMG +C + + +PE ++ + ++ L Y+ K G IHR VK S+I
Sbjct: 99 VFIAMELMG--TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 156
Query: 494 LISHNGKACLSGLRYMCPFSPTKKKVH-LFPPSTAYNLNWLSPEVLEQ---NLDGYDERS 549
L+ G+ L C F + + V +A +++PE ++ YD R+
Sbjct: 157 LLDERGQIKL------CDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA 210
Query: 550 DIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 589
D++S+GIS ELA G P+ T ++ K+ P LL
Sbjct: 211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 49/303 (16%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYI 76
+G+ + + KH T + +AVKK +L + +L L +E+V MR H N++
Sbjct: 53 IGEGSTGIVCIATEKH--TGKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMY 108
Query: 77 SSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHR 136
SS+L +L +V + G+ D++ + + E I + VL L Y+H +G IHR
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 137 AVKASHILISHNGKACLSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLD 193
+K+ IL++ +G+ LS + S P +K + T Y W++PEV+ +
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL----VGTPY---WMAPEVISRL-- 216
Query: 194 GYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDG 253
Y DI+S+GI E+ +G P+ P L + ++ + P
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFNEP-PLQAMRRIRDSLP----------------- 258
Query: 254 EENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSV 313
+V K S ++L L R+ +R A LL H F K S
Sbjct: 259 ------------PRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSC 306
Query: 314 MLP 316
++P
Sbjct: 307 IVP 309
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYI 426
+G+ + + KH T + +AVKK +L + +L L +E+V MR H N++
Sbjct: 53 IGEGSTGIVCIATEKH--TGKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMY 108
Query: 427 SSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHR 486
SS+L +L +V + G+ D++ + + E I + VL L Y+H +G IHR
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 487 AVKASHILISHNGKACLSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLD 543
+K+ IL++ +G+ LS + S P +K + T Y W++PEV+ +
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL----VGTPY---WMAPEVISRL-- 216
Query: 544 GYDERSDIYSVGISCCELANGTVP-FAETPTTLM 576
Y DI+S+GI E+ +G P F E P M
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM 250
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 92
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 53 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 110
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 111 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 167
Query: 153 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 168 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 218
Query: 210 ELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVL 269
E+ +G P+ P + P L +
Sbjct: 219 EMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL---------------------------- 250
Query: 270 TSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S S ++ L RD +R A LL+H F + + ++P
Sbjct: 251 --HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 442
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 53 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 110
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 111 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 167
Query: 503 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 168 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 218
Query: 560 ELANGTVP-FAETPTTLM 576
E+ +G P F E P M
Sbjct: 219 EMVDGEPPYFNEPPLKAM 236
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 92
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 96 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 154 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 210
Query: 153 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 211 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 261
Query: 210 ELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVL 269
E+ +G P+ P + P L +
Sbjct: 262 EMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL---------------------------- 293
Query: 270 TSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S S ++ L RD +R A LL+H F + + ++P
Sbjct: 294 --HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 338
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 442
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 96 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 154 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 210
Query: 503 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 211 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 261
Query: 560 ELANGTVP-FAETPTTLM 576
E+ +G P F E P M
Sbjct: 262 EMVDGEPPYFNEPPLKAM 279
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 92
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 51 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 108
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 109 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 165
Query: 153 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 166 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 216
Query: 210 ELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVL 269
E+ +G P+ P + P L +
Sbjct: 217 EMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL---------------------------- 248
Query: 270 TSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
K S S ++ L RD +R A LL+H F + + ++P
Sbjct: 249 --HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 442
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 51 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 108
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 109 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 165
Query: 503 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 166 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 216
Query: 560 ELANGTVP-FAETPTTLM 576
E+ +G P F E P M
Sbjct: 217 EMVDGEPPYFNEPPLKAM 234
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 48/291 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 92
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 173 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 231 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 287
Query: 153 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 288 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 338
Query: 210 ELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVL 269
E+ +G P+ P + P L +
Sbjct: 339 EMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL---------------------------- 370
Query: 270 TSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELLR 320
K S S ++ L RD +R A LL+H F + + ++P L+R
Sbjct: 371 --HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP-LMR 418
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 442
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 173 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 231 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 287
Query: 503 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 288 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 338
Query: 560 ELANGTVP-FAETPTTLM 576
E+ +G P F E P M
Sbjct: 339 EMVDGEPPYFNEPPLKAM 356
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 49/288 (17%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 92
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 42 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 99
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 100 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 156
Query: 153 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 157 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 207
Query: 210 ELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVL 269
E+ +G P+ P A I + L
Sbjct: 208 EMVDGEPPYFNEPPL-------------------------------KAMKMIRDNLPPRL 236
Query: 270 TS-RKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
+ K S S ++ L RD +R A LL+H F + + ++P
Sbjct: 237 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 442
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 42 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 99
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
G+ D++ H E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 100 EGGALTDIVT-HTRMN--EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 156
Query: 503 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 157 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 207
Query: 560 ELANGTVP-FAETPTTLM 576
E+ +G P F E P M
Sbjct: 208 EMVDGEPPYFNEPPLKAM 225
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 49/288 (17%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 92
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 46 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 103
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
G+ D++ + + E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 104 EGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 160
Query: 153 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 161 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 211
Query: 210 ELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVL 269
E+ +G P+ P A I + L
Sbjct: 212 EMVDGEPPYFNEPPL-------------------------------KAMKMIRDNLPPRL 240
Query: 270 TS-RKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
+ K S S ++ L RD +R A LL+H F + + ++P
Sbjct: 241 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 18/198 (9%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLM 442
+ + +L+AVKK +L + +L L +E+V MR +H N++ +S+L +L +V +
Sbjct: 46 RSSGKLVAVKKMDLRKQQRREL--LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 103
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
G+ D++ + + E I + VL L +H +G IHR +K+ IL++H+G+
Sbjct: 104 EGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVK 160
Query: 503 LSGLRYMCPFS---PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
LS + S P +K + T Y W++PE++ + Y DI+S+GI
Sbjct: 161 LSDFGFCAQVSKEVPRRKXLV----GTPY---WMAPELISRL--PYGPEVDIWSLGIMVI 211
Query: 560 ELANGTVP-FAETPTTLM 576
E+ +G P F E P M
Sbjct: 212 EMVDGEPPYFNEPPLKAM 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 42/269 (15%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN-FGLPELV 113
+ LH EI +HL+H NI+ Y+ SF + + + + GS L+ + + E
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 123
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP 173
I + +L GL+Y+H +HR +K ++LI+ SG+ + F +K+ + P
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN-----TYSGVLKISDFGTSKRLAGINP 178
Query: 174 PSTAYN--LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE--TPTTLMLIE 229
+ + L +++PE++++ GY + +DI+S+G + E+A G PF E P M
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 238
Query: 230 KLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRD 289
+ P + + + +E + +L C D
Sbjct: 239 GMFKVHPEIPESMS------------------AEAKAFILK--------------CFEPD 266
Query: 290 VDKRPLACNLLQHAFFKQTKKCSVMLPEL 318
DKR A +LL F K + K P+L
Sbjct: 267 PDKRACANDLLVDEFLKVSSKKKKTQPKL 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN-FGLPELV 463
+ LH EI +HL+H NI+ Y+ SF + + + + GS L+ + + E
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 123
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP 523
I + +L GL+Y+H +HR +K ++LI+ SG+ + F +K+ + P
Sbjct: 124 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN-----TYSGVLKISDFGTSKRLAGINP 178
Query: 524 PSTAYN--LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+ + L +++PE++++ GY + +DI+S+G + E+A G PF E
Sbjct: 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 10 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 65
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + C +P+ ++ L + L++L PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSC-HAPSSRRTTL-----SGTLDYLPPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 10 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 65
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + C +P+ ++ L + L++L PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSC-HAPSSRRTTL-----SGTLDYLPPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN-FGLPELV 113
+ LH EI +HL+H NI+ Y+ SF + + + + GS L+ + + E
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 109
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP 173
I + +L GL+Y+H +HR +K ++LI+ SG+ + F +K+ + P
Sbjct: 110 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN-----TYSGVLKISDFGTSKRLAGINP 164
Query: 174 PSTAYN--LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
+ + L +++PE++++ GY + +DI+S+G + E+A G PF E
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 213
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN-FGLPELV 463
+ LH EI +HL+H NI+ Y+ SF + + + + GS L+ + + E
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 109
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP 523
I + +L GL+Y+H +HR +K ++LI+ SG+ + F +K+ + P
Sbjct: 110 IGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN-----TYSGVLKISDFGTSKRLAGINP 164
Query: 524 PSTAYN--LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+ + L +++PE++++ GY + +DI+S+G + E+A G PF E
Sbjct: 165 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 213
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 45/307 (14%)
Query: 3 TLDNVPSNYKICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI 61
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 30 TRDLNPEDF--WEIIGELGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEI 85
Query: 62 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
+ HPNI+ + +F +L ++ G+ D + L E I + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQT 144
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
L+ L Y+H IHR +KA +IL + +G L+ + T ++ F T Y
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF-IGTPY--- 200
Query: 182 WLSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPH 237
W++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPP 258
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC 297
L ++S +F ++ CL ++VD R
Sbjct: 259 TL-----------------------------AQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 298 NLLQHAF 304
LLQH F
Sbjct: 290 QLLQHPF 296
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 16/242 (6%)
Query: 353 TLDNVPSNYKICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI 411
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 30 TRDLNPEDF--WEIIGELGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEI 85
Query: 412 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
+ HPNI+ + +F +L ++ G+ D + L E I + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQT 144
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
L+ L Y+H IHR +KA +IL + +G L+ + T ++ F T Y
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF-IGTPY--- 200
Query: 532 WLSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPH 587
W++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPP 258
Query: 588 LL 589
L
Sbjct: 259 TL 260
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 44/306 (14%)
Query: 3 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIV 62
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 5 TRDLNPEDF--WEIIGE-LGDFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEID 59
Query: 63 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 122
+ HPNI+ + +F +L ++ G+ D + L E I + + L
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTL 118
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNW 182
+ L Y+H IHR +KA +IL + +G L+ + T + T Y W
Sbjct: 119 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY---W 175
Query: 183 LSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPHL 238
++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPPT 233
Query: 239 LDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACN 298
L ++S +F ++ CL ++VD R
Sbjct: 234 L-----------------------------AQPSRWSSNFKDFLKKCLEKNVDARWTTSQ 264
Query: 299 LLQHAF 304
LLQH F
Sbjct: 265 LLQHPF 270
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 15/241 (6%)
Query: 353 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIV 412
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 5 TRDLNPEDF--WEIIGE-LGDFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEID 59
Query: 413 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 472
+ HPNI+ + +F +L ++ G+ D + L E I + + L
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTL 118
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNW 532
+ L Y+H IHR +KA +IL + +G L+ + T + T Y W
Sbjct: 119 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY---W 175
Query: 533 LSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPHL 588
++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 176 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPPT 233
Query: 589 L 589
L
Sbjct: 234 L 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 3 TLDNVPSNYKICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI 61
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 30 TRDLNPEDF--WEIIGELGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEI 85
Query: 62 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
+ HPNI+ + +F +L ++ G+ D + L E I + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQT 144
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
L+ L Y+H IHR +KA +IL + +G L+ + ++ F T Y
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF-IGTPY--- 200
Query: 182 WLSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPH 237
W++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPP 258
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC 297
L ++S +F ++ CL ++VD R
Sbjct: 259 TL-----------------------------AQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 298 NLLQHAF 304
LLQH F
Sbjct: 290 QLLQHPF 296
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 16/242 (6%)
Query: 353 TLDNVPSNYKICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI 411
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 30 TRDLNPEDF--WEIIGELGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEI 85
Query: 412 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
+ HPNI+ + +F +L ++ G+ D + L E I + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQT 144
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
L+ L Y+H IHR +KA +IL + +G L+ + ++ F T Y
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF-IGTPY--- 200
Query: 532 WLSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPH 587
W++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPP 258
Query: 588 LL 589
L
Sbjct: 259 TL 260
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 12 KICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
++ I+G+ + VY +K+K T L A K ++ ++E+L+ EI + HP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAK--VIETKSEEELEDYIVEIEILATCDHP 76
Query: 71 NIICYISSFLDATDLHLVSPLMGF--GSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
I+ + ++ L + ++ F G D I + GL E I + + +L L ++
Sbjct: 77 YIVKLLGAYYHDGKLWI---MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 133
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K IHR +KA ++L++ G L+ T +K F T Y W++PEV+
Sbjct: 134 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPY---WMAPEVV 189
Query: 189 --EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPHLLDCTTY 244
E D YD ++DI+S+GI+ E+A P E P ++L K+A + P L
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL--KIAKSDPPTL----- 242
Query: 245 YVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAF 304
LT K+S F +++ L ++ + RP A LL+H F
Sbjct: 243 ------------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 362 KICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
++ I+G+ + VY +K+K T L A K ++ ++E+L+ EI + HP
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAK--VIETKSEEELEDYIVEIEILATCDHP 76
Query: 421 NIICYISSFLDATDLHLVSPLMGF--GSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
I+ + ++ L + ++ F G D I + GL E I + + +L L ++
Sbjct: 77 YIVKLLGAYYHDGKLWI---MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 133
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
H K IHR +KA ++L++ G L+ T +K F T Y W++PEV+
Sbjct: 134 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPY---WMAPEVV 189
Query: 539 --EQNLDG-YDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYY 595
E D YD ++DI+S+GI+ E+A P E +L++ P LL + +
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS 249
Query: 596 VD 597
V+
Sbjct: 250 VE 251
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 12 KICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
++ I+G+ + VY +K+K T L A K ++ ++E+L+ EI + HP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAK--VIETKSEEELEDYIVEIEILATCDHP 68
Query: 71 NIICYISSFLDATDLHLVSPLMGF--GSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
I+ + ++ L + ++ F G D I + GL E I + + +L L ++
Sbjct: 69 YIVKLLGAYYHDGKLWI---MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 125
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K IHR +KA ++L++ G L+ T +K F T Y W++PEV+
Sbjct: 126 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPY---WMAPEVV 181
Query: 189 --EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPHLLDCTTY 244
E D YD ++DI+S+GI+ E+A P E P ++L K+A + P L
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL--KIAKSDPPTL----- 234
Query: 245 YVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAF 304
LT K+S F +++ L ++ + RP A LL+H F
Sbjct: 235 ------------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 270
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 15/242 (6%)
Query: 362 KICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
++ I+G+ + VY +K+K T L A K ++ ++E+L+ EI + HP
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAK--VIETKSEEELEDYIVEIEILATCDHP 68
Query: 421 NIICYISSFLDATDLHLVSPLMGF--GSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
I+ + ++ L + ++ F G D I + GL E I + + +L L ++
Sbjct: 69 YIVKLLGAYYHDGKLWI---MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 125
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
H K IHR +KA ++L++ G L+ T +K F T Y W++PEV+
Sbjct: 126 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF-IGTPY---WMAPEVV 181
Query: 539 --EQNLDG-YDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYY 595
E D YD ++DI+S+GI+ E+A P E +L++ P LL + +
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS 241
Query: 596 VD 597
V+
Sbjct: 242 VE 243
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 42/293 (14%)
Query: 6 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCM 64
N +N++I +G+ S VY + + +A+KK + + D ++ EI +
Sbjct: 29 NTLANFRIEKKIGR--GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDV 121
+ L HPN+I Y +SF++ +L++V L G +I HF +PE + +
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK-HFKKQKRLIPERTVWKYFVQL 145
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
+ LE++H + +HR +K +++ I+ G L L FS H + Y
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY--- 202
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDC 241
+SPE + +N GY+ +SDI+S+G E+A PF L +
Sbjct: 203 -MSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL------------- 246
Query: 242 TTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRP 294
C I + L S +S+ +V +C++ D +KRP
Sbjct: 247 ----------------CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 13/217 (5%)
Query: 356 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCM 414
N +N++I +G+ S VY + + +A+KK + + D ++ EI +
Sbjct: 29 NTLANFRIEKKIGR--GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDV 471
+ L HPN+I Y +SF++ +L++V L G +I HF +PE + +
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIK-HFKKQKRLIPERTVWKYFVQL 145
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
+ LE++H + +HR +K +++ I+ G L L FS H + Y
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY--- 202
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+SPE + +N GY+ +SDI+S+G E+A PF
Sbjct: 203 -MSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 45/307 (14%)
Query: 3 TLDNVPSNYKICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI 61
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 30 TRDLNPEDF--WEIIGELGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEI 85
Query: 62 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
+ HPNI+ + +F +L ++ G+ D + L E I + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQT 144
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
L+ L Y+H IHR +KA +IL + +G L+ + ++ F T Y
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF-IGTPY--- 200
Query: 182 WLSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPH 237
W++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPP 258
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC 297
L ++S +F ++ CL ++VD R
Sbjct: 259 TL-----------------------------AQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 298 NLLQHAF 304
LLQH F
Sbjct: 290 QLLQHPF 296
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 16/242 (6%)
Query: 353 TLDNVPSNYKICSILGQCFNN-LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEI 411
T D P ++ I+G+ + VY +++K T+ L A K +D ++E+L+ EI
Sbjct: 30 TRDLNPEDF--WEIIGELGDGAFGKVYKAQNKETSVLAAAKV--IDTKSEEELEDYMVEI 85
Query: 412 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
+ HPNI+ + +F +L ++ G+ D + L E I + +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQT 144
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
L+ L Y+H IHR +KA +IL + +G L+ + ++ F T Y
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF-IGTPY--- 200
Query: 532 WLSPEVL--EQNLDG-YDERSDIYSVGISCCELANGTVPFAE-TPTTLMLIEKLAGATPH 587
W++PEV+ E + D YD ++D++S+GI+ E+A P E P ++L K+A + P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKSEPP 258
Query: 588 LL 589
L
Sbjct: 259 TL 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTEL-----CGTLDYLPPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTEL-----CGTLDYLPPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 35 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 90
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 148
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 202
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 203 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 232
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 35 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 90
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 148
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 202
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 203 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
++ I LG+ +VYL++ + + ++A+K K L++ E L E+ H
Sbjct: 13 DFDIGRPLGK--GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH--QLRREVEIQSH 68
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYITELANALS 126
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ NG+ ++ + +P+ ++ L L++L PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 180
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 181 MIEGRM--HDEKVDLWSLGVLCYEFLVGMPPF 210
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
++ I LG+ +VYL++ + + ++A+K K L++ E L E+ H
Sbjct: 13 DFDIGRPLGK--GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH--QLRREVEIQSH 68
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYITELANALS 126
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ NG+ ++ + +P+ ++ L L++L PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 180
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 181 MIEGRM--HDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 65
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 8 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 63
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 121
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 175
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 415
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 8 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 63
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 121
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPP 175
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 65
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 8 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 63
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 121
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTXL-----CGTLDYLPP 175
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 415
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 8 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 63
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 121
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTXL-----CGTLDYLPP 175
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 11 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 66
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 124
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----CGTLDYLPPE 178
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 208
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 11 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 66
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 124
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----CGTLDYLPPE 178
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 90
HK TN AVK + D+ + EI + +R+ +HPNII + D ++LV+
Sbjct: 48 HKATNMEYAVK------VIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTE 101
Query: 91 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 149
LM G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 102 LMRGGELLDKILRQKFFS--EREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 150 K-ACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 206
CL +C F K + + + Y N+++PEVL++ GYDE DI+S+GI
Sbjct: 160 NPECLR----ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGI 213
Query: 207 SCCELANGTVPFAETPT 223
+ G PFA P+
Sbjct: 214 LLYTMLAGYTPFANGPS 230
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 440
HK TN AVK + D+ + EI + +R+ +HPNII + D ++LV+
Sbjct: 48 HKATNMEYAVK------VIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTE 101
Query: 441 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 499
LM G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 102 LMRGGELLDKILRQKFFS--EREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 500 K-ACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 556
CL +C F K + + + Y N+++PEVL++ GYDE DI+S+GI
Sbjct: 160 NPECLR----ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGI 213
Query: 557 SCCELANGTVPFAETPT 573
+ G PFA P+
Sbjct: 214 LLYTMLAGYTPFANGPS 230
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 10 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 65
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 10 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 65
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----CGTLDYLPPE 179
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTTL-----CGTLDYLPPE 179
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDYLPPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDYLPPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 26 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 81
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 139
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 193
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 194 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 223
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 26 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 81
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 139
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 193
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 194 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDYLPPE 179
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDYLPPE 179
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 179
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 179
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 8 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 63
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 121
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 175
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 205
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 8 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 63
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 121
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 175
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPPE 181
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTDL-----CGTLDYLPPE 181
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 11 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 66
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 124
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPPE 178
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 208
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 11 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 66
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 124
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPPE 178
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 13 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 68
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 126
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 180
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 181 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 210
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 13 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 68
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 126
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 180
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 181 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 181
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 181
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 65
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 8 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 63
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 121
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPP 175
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 415
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 8 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 63
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 121
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPP 175
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 176 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 90
HK TN AVK + D+ + EI + +R+ +HPNII + D ++LV+
Sbjct: 48 HKATNMEYAVK------VIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTE 101
Query: 91 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 149
LM G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 102 LMRGGELLDKILRQKFFS--EREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 150 KA-CLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 206
CL +C F K + + + Y N+++PEVL++ GYDE DI+S+GI
Sbjct: 160 NPECLR----ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGI 213
Query: 207 SCCELANGTVPFAETPT 223
+ G PFA P+
Sbjct: 214 LLYTMLAGYTPFANGPS 230
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 440
HK TN AVK + D+ + EI + +R+ +HPNII + D ++LV+
Sbjct: 48 HKATNMEYAVK------VIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTE 101
Query: 441 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 499
LM G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 102 LMRGGELLDKILRQKFFS--EREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 500 KA-CLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 556
CL +C F K + + + Y N+++PEVL++ GYDE DI+S+GI
Sbjct: 160 NPECLR----ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGI 213
Query: 557 SCCELANGTVPFAETPT 573
+ G PFA P+
Sbjct: 214 LLYTMLAGYTPFANGPS 230
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 65
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 11 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 66
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 124
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 178
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 415
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 11 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 66
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 124
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 178
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 35 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 90
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 148
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----CGTLDYLPPE 202
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 203 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 232
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 35 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 90
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 148
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----CGTLDYLPPE 202
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 203 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 65
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 11 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 66
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 124
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPP 178
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 415
+++I LG+ +VYL++ K + ++A+K K L++ E L E+
Sbjct: 11 EDFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 66
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 124
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----CGTLDYLPP 178
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 179 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYITELANALS 127
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----XGTLDYLPPE 181
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYITELANALS 127
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXXL-----XGTLDYLPPE 181
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
++ I LG+ +VYL++ + + ++A+K K L++ E L E+ H
Sbjct: 13 DFDIGRPLGK--GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH--QLRREVEIQSH 68
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYITELANALS 126
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ NG+ ++ + +P+ ++ L L++L PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV-HAPSSRRDTL-----CGTLDYLPPE 180
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 181 MIEGRM--HDEKVDLWSLGVLCYEFLVGMPPF 210
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
++ I LG+ +VYL++ + + ++A+K K L++ E L E+ H
Sbjct: 13 DFDIGRPLGK--GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEH--QLRREVEIQSH 68
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYITELANALS 126
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ NG+ ++ + +P+ ++ L L++L PE
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSV-HAPSSRRDTL-----CGTLDYLPPE 180
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 181 MIEGRM--HDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y I +LG+ + V K ++T Q AVK N ++D ++ E+ ++ L H
Sbjct: 23 RYNIVCMLGK--GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ D++ ++V L G D I F E I++ V +G+ Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMH 138
Query: 130 GKGFIHRAVKASHILISHNGKAC-----LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+HR +K +IL+ K C GL C TK K + TAY +++
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI---GTAY---YIA 191
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PEVL YDE+ D++S G+ L +GT PF
Sbjct: 192 PEVLRGT---YDEKCDVWSAGVILYILLSGTPPF 222
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y I +LG+ + V K ++T Q AVK N ++D ++ E+ ++ L H
Sbjct: 23 RYNIVCMLGK--GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ D++ ++V L G D I F E I++ V +G+ Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMH 138
Query: 480 GKGFIHRAVKASHILISHNGKAC-----LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+HR +K +IL+ K C GL C TK K + TAY +++
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI---GTAY---YIA 191
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PEVL YDE+ D++S G+ L +GT PF
Sbjct: 192 PEVLRGT---YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----CGTLDYLPPE 179
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 12 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 67
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 125
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDL-----CGTLDYLPPE 179
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 65
+++I LG+ +VYL++ K ++A+K K L++ E L E+
Sbjct: 5 EDFEIGRPLGK--GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 60
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 118
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 172
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 173 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 203
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMR 415
+++I LG+ +VYL++ K ++A+K K L++ E L E+
Sbjct: 5 EDFEIGRPLGK--GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEH--QLRREVEIQS 60
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
HLRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANAL 118
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L P
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPP 172
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E++E + +DE+ D++S+G+ C E G PF
Sbjct: 173 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYITELANALS 127
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 181
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYITELANALS 127
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 181
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 10 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 65
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDTL-----CGTLDYLPPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 207
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 10 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 65
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 123
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDTL-----CGTLDYLPPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y I +LG+ + V K ++T Q AVK N ++D ++ E+ ++ L H
Sbjct: 23 RYNIVCMLGK--GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ D++ ++V L G D I F E I++ V +G+ Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMH 138
Query: 130 GKGFIHRAVKASHILISHNGKAC-----LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+HR +K +IL+ K C GL C TK K + TAY +++
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI---GTAY---YIA 191
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PEVL YDE+ D++S G+ L +GT PF
Sbjct: 192 PEVLRGT---YDEKCDVWSAGVILYILLSGTPPF 222
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y I +LG+ + V K ++T Q AVK N ++D ++ E+ ++ L H
Sbjct: 23 RYNIVCMLGK--GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ D++ ++V L G D I F E I++ V +G+ Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMH 138
Query: 480 GKGFIHRAVKASHILISHNGKAC-----LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+HR +K +IL+ K C GL C TK K + TAY +++
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI---GTAY---YIA 191
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PEVL YDE+ D++S G+ L +GT PF
Sbjct: 192 PEVLRGT---YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F D+T ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDYLPPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 9 DFEIGRPLGK--GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 64
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F D+T ++L+ G+ + F E + ++ N L
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 122
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAAL-----CGTLDYLPPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++E + +DE+ D++S+G+ C E G PF
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y I +LG+ + V K ++T Q AVK N ++D ++ E+ ++ L H
Sbjct: 23 RYNIVCMLGK--GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ D++ ++V L G D I F E I++ V +G+ Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMH 138
Query: 130 GKGFIHRAVKASHILISHNGKAC-----LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+HR +K +IL+ K C GL C TK K + TAY +++
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI---GTAY---YIA 191
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PEVL YDE+ D++S G+ L +GT PF
Sbjct: 192 PEVLRGT---YDEKCDVWSAGVILYILLSGTPPF 222
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y I +LG+ + V K ++T Q AVK N ++D ++ E+ ++ L H
Sbjct: 23 RYNIVCMLGK--GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ D++ ++V L G D I F E I++ V +G+ Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS--EHDAARIIKQVFSGITYMH 138
Query: 480 GKGFIHRAVKASHILISHNGKAC-----LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+HR +K +IL+ K C GL C TK K + TAY +++
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI---GTAY---YIA 191
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PEVL YDE+ D++S G+ L +GT PF
Sbjct: 192 PEVLRGT---YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 181
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+E +DE+ D++S+G+ C E G PF
Sbjct: 182 XIEGRX--HDEKVDLWSLGVLCYEFLVGKPPF 211
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
+++I LG+ +VYL++ K + ++A+K K L++ E L E+ H
Sbjct: 14 DFEIGRPLGK--GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH--QLRREVEIQSH 69
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
LRHPNI+ F DAT ++L+ G+ + F E + ++ N L
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYITELANALS 127
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y H K IHR +K ++L+ G+ ++ + +P+ ++ L L++L PE
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTL-----CGTLDYLPPE 181
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+E +DE+ D++S+G+ C E G PF
Sbjct: 182 XIEGRX--HDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
F + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 AGFVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
F + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 AGFVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
F + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 AGFVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
F + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 AGFVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 125
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 126 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 175
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
F + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 176 AGFVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 231 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 279
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 280 LLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 125
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 126 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 175
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
F + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 176 AGFVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 231 ILRLVG-TP 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 41/281 (14%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
HK + Q++AVK+ E + L V MR P I+ + + D + L
Sbjct: 43 HKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL 102
Query: 92 MG--FGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISHN 148
M F + + + +PE ++ I + L ++ IHR +K S+IL+ +
Sbjct: 103 MSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRS 162
Query: 149 GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN-WLSPEVLE--QNLDGYDERSDIYSVG 205
G L C F + + V + +++PE ++ + GYD RSD++S+G
Sbjct: 163 GNIKL------CDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216
Query: 206 ISCCELANGTVPFAETPTTL-MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQ 264
I+ ELA G P+ + + L + + G P L + EE
Sbjct: 217 ITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL------------SNSEE--------- 255
Query: 265 QTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
R+FS SF + V LCL++D KRP LL+H F
Sbjct: 256 -------REFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
HK + Q++AVK+ E + L V MR P I+ + + D + L
Sbjct: 43 HKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL 102
Query: 442 MG--FGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISHN 498
M F + + + +PE ++ I + L ++ IHR +K S+IL+ +
Sbjct: 103 MSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRS 162
Query: 499 GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN-WLSPEVLE--QNLDGYDERSDIYSVG 555
G L C F + + V + +++PE ++ + GYD RSD++S+G
Sbjct: 163 GNIKL------CDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216
Query: 556 ISCCELANGTVPFAETPTTL-MLIEKLAGATPHL 588
I+ ELA G P+ + + L + + G P L
Sbjct: 217 ITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL 250
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 90
HK TN AVK + D+ + EI + +R+ +HPNII + D +++V+
Sbjct: 43 HKATNMEFAVK------IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
Query: 91 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 149
LM G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 97 LMKGGELLDKILRQKFFS--EREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 150 KACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGIS 207
+R +C F K + + + Y N+++PEVLE+ GYD DI+S+G+
Sbjct: 155 NP--ESIR-ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQ--GYDAACDIWSLGVL 209
Query: 208 CCELANGTVPFAETP 222
+ G PFA P
Sbjct: 210 LYTMLTGYTPFANGP 224
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 440
HK TN AVK + D+ + EI + +R+ +HPNII + D +++V+
Sbjct: 43 HKATNMEFAVK------IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
Query: 441 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 499
LM G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 97 LMKGGELLDKILRQKFFS--EREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 500 KACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGIS 557
+R +C F K + + + Y N+++PEVLE+ GYD DI+S+G+
Sbjct: 155 NP--ESIR-ICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQ--GYDAACDIWSLGVL 209
Query: 558 CCELANGTVPFAETP 572
+ G PFA P
Sbjct: 210 LYTMLTGYTPFANGP 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 143/329 (43%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + + + G F +
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILG------FGLAR--- 173
Query: 170 HLFPPSTAY-NLNWL-SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
H T Y W +PE++ N Y++ DI+SVG EL G F T L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 233 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 281
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 282 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + + + G F +
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILG------FGLAR--- 173
Query: 520 HLFPPSTAY-NLNWL-SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
H T Y W +PE++ N Y++ DI+SVG EL G F T L
Sbjct: 174 HTDDEMTGYVATRWYRAPEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 233 KLILRLVG-TP 242
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 25/254 (9%)
Query: 321 PALSLNESNVCEINNELECMFNINDTFNSSVETLDNVPSNYKICSILGQCFNNLSSVYLS 380
PAL N++ I+N L DT N + L +Y++ ++G+ V L
Sbjct: 44 PALRKNKN----IDNFLS---RYKDTINK-IRDLRMKAEDYEVVKVIGR--GAFGEVQLV 93
Query: 381 KHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHL 437
+HK T ++ A+K KF + + +D E M P ++ +F D L++
Sbjct: 94 RHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQLFYAFQDDRYLYM 151
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V M G DL+N N+ +PE +V+ L+ IH GFIHR VK ++L+
Sbjct: 152 VMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 498 NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSPEVLE-QNLDGYDERS-DIYSV 554
+G L+ + K + TA +++SPEVL+ Q DGY R D +SV
Sbjct: 209 SGHLKLADFGTCMKMN----KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 555 GISCCELANGTVPF 568
G+ E+ G PF
Sbjct: 265 GVFLYEMLVGDTPF 278
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+Y++ ++G+ V L +HK T ++ A+K KF + + +D E M
Sbjct: 75 DYEVVKVIGR--GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAF 130
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
P ++ +F D L++V M G DL+N N+ +PE +V+ L+
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSP 185
IH GFIHR VK ++L+ +G L+ + K + TA +++SP
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----KEGMVRCDTAVGTPDYISP 243
Query: 186 EVLE-QNLDGYDERS-DIYSVGISCCELANGTVPF 218
EVL+ Q DGY R D +SVG+ E+ G PF
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 51 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 106
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 164
Query: 127 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAY---YI 219
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 220 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 251
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 51 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 106
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 164
Query: 477 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAY---YI 219
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 220 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 27 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 82
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 140
Query: 127 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAY---YI 195
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 196 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 227
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 27 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 82
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 140
Query: 477 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAY---YI 195
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 196 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 50 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 105
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 163
Query: 127 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAY---YI 218
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 219 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 250
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 50 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 105
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 163
Query: 477 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAY---YI 218
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 219 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 139/329 (42%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K +GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY 182
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 233 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 281
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 282 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K +GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY 182
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 233 KLILRLVG-TP 242
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 144/327 (44%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + + + Y+ T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF-YLA--RHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF-------HS 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + + + Y+ T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF-YLA--RHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY 188
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 189 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 239 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 287
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 288 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY 188
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 189 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 239 KLILRLVG-TP 248
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY 184
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 185 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 283
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY 184
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 185 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 235 KLILRLVG-TP 244
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 25/254 (9%)
Query: 321 PALSLNESNVCEINNELECMFNINDTFNSSVETLDNVPSNYKICSILGQCFNNLSSVYLS 380
PAL N++ I+N L DT N + L +Y++ ++G+ V L
Sbjct: 39 PALRKNKN----IDNFLS---RYKDTINK-IRDLRMKAEDYEVVKVIGR--GAFGEVQLV 88
Query: 381 KHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHL 437
+HK T ++ A+K KF + + +D E M P ++ +F D L++
Sbjct: 89 RHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V M G DL+N N+ +PE +V+ L+ IH GFIHR VK ++L+
Sbjct: 147 VMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 203
Query: 498 NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSPEVLE-QNLDGYDERS-DIYSV 554
+G L+ + K + TA +++SPEVL+ Q DGY R D +SV
Sbjct: 204 SGHLKLADFGTCMKMN----KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259
Query: 555 GISCCELANGTVPF 568
G+ E+ G PF
Sbjct: 260 GVFLYEMLVGDTPF 273
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+Y++ ++G+ V L +HK T ++ A+K KF + + +D E M
Sbjct: 70 DYEVVKVIGR--GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAF 125
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
P ++ +F D L++V M G DL+N N+ +PE +V+ L+
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALD 182
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSP 185
IH GFIHR VK ++L+ +G L+ + K + TA +++SP
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----KEGMVRCDTAVGTPDYISP 238
Query: 186 EVLE-QNLDGYDERS-DIYSVGISCCELANGTVPF 218
EVL+ Q DGY R D +SVG+ E+ G PF
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 149
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 150 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 199
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 200 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 255 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 303
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 304 LLEKMLVLDSDKRITAAQALAHAYFAQ 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 149
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 150 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 199
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 200 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 255 ILRLVG-TP 262
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 33 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 88
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 146
Query: 127 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAY---YI 201
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 202 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 233
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 33 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 88
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HPNI+ F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 146
Query: 477 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
Y+H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAY---YI 201
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 202 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 233
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 125
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 126 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 175
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 176 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 231 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 279
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 280 LLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 125
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 126 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 175
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 176 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 231 ILRLVG-TP 238
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 25/254 (9%)
Query: 321 PALSLNESNVCEINNELECMFNINDTFNSSVETLDNVPSNYKICSILGQCFNNLSSVYLS 380
PAL N++ I+N L DT N + L +Y++ ++G+ V L
Sbjct: 44 PALRKNKN----IDNFLS---RYKDTINK-IRDLRMKAEDYEVVKVIGR--GAFGEVQLV 93
Query: 381 KHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHL 437
+HK T ++ A+K KF + + +D E M P ++ +F D L++
Sbjct: 94 RHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQLFYAFQDDRYLYM 151
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V M G DL+N N+ +PE +V+ L+ IH GFIHR VK ++L+
Sbjct: 152 VMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK 208
Query: 498 NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSPEVLE-QNLDGYDERS-DIYSV 554
+G L+ + K + TA +++SPEVL+ Q DGY R D +SV
Sbjct: 209 SGHLKLADFGTCMKMN----KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
Query: 555 GISCCELANGTVPF 568
G+ E+ G PF
Sbjct: 265 GVFLYEMLVGDTPF 278
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+Y++ ++G+ V L +HK T ++ A+K KF + + +D E M
Sbjct: 75 DYEVVKVIGR--GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAF 130
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
P ++ +F D L++V M G DL+N N+ +PE +V+ L+
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSP 185
IH GFIHR VK ++L+ +G L+ + K + TA +++SP
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----KEGMVRCDTAVGTPDYISP 243
Query: 186 EVLE-QNLDGYDERS-DIYSVGISCCELANGTVPF 218
EVL+ Q DGY R D +SVG+ E+ G PF
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 90
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 148
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 149 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 198
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 199 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 254 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 302
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 303 LLEKMLVLDSDKRITAAQALAHAYFAQ 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 90
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 148
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 149 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 198
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 199 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 254 ILRLVG-TP 261
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 187
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 188 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF------- 278
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 238 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 286
Query: 279 HSIVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 287 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 187
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 188 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 238 KLILRLVG-TP 247
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY 182
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 233 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 281
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 282 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY 182
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 233 KLILRLVG-TP 242
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 82
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 140
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 141 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 193
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 194 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 244 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 292
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 293 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 82
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 140
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 141 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 193
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 194 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 244 KLILRLVG-TP 253
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY 182
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 233 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 281
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 282 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY 182
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 233 KLILRLVG-TP 242
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 185
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 186 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 241 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 289
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 290 LLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 185
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 186 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 241 ILRLVG-TP 248
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 187
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 188 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF------- 278
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 238 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 286
Query: 279 HSIVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 287 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY 187
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 188 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 238 KLILRLVG-TP 247
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 94
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 152
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 153 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 202
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 203 XGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 258 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 306
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 307 LLEKMLVLDSDKRITAAQALAHAYFAQ 333
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 94
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 152
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 153 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 202
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 203 XGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 258 ILRLVG-TP 265
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADEM 186
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 242 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 290
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 291 LLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADEM 186
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 242 ILRLVG-TP 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADEM 186
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 242 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 290
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 291 LLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADEM 186
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 242 ILRLVG-TP 249
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ + N L L Y T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAV--NEDCELKILDYGLA-RHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF-------HS 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ + N L L Y T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAV--NEDCELKILDYGLA-RHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 184
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 185 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 240 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 288
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 289 LLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 184
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 185 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 240 ILRLVG-TP 247
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 94
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 152
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 153 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 202
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 203 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 258 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 306
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 307 LLEKMLVLDSDKRITAAQALAHAYFAQ 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 94
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 95 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 152
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 153 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 202
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 203 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 258 ILRLVG-TP 265
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 83
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 141
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 142 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 191
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 192 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 247 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 295
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 296 LLEKMLVLDSDKRITAAQALAHAYFAQ 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 83
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 141
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 142 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 191
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 192 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 247 ILRLVG-TP 254
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 83
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 141
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 142 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 191
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 192 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 247 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 295
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 296 LLEKMLVLDSDKRITAAQALAHAYFAQ 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 83
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 141
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 142 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 191
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 192 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 247 ILRLVG-TP 254
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 141/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C L + H F
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-- 125
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 126 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 175
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 176 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 231 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 279
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 280 LLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 35/250 (14%)
Query: 351 VETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH 409
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K +
Sbjct: 10 AKTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 410 EIVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFG 458
E+ ++H++H N+I + F A D++LV+ LMG C L + H F
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF- 125
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKK 518
++ +L GL+YIH IHR +K S++ ++ + C + T +
Sbjct: 126 --------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDE 174
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLM 576
+ + + Y +PE++ N Y++ DI+SVG EL G F T L
Sbjct: 175 MTGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229
Query: 577 LIEKLAGATP 586
LI +L G TP
Sbjct: 230 LILRLVG-TP 238
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFG-----SCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 181
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 182 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 237 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 285
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 286 LLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFG-----SCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 181
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 182 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 237 ILRLVG-TP 244
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADEM 186
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 242 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 290
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 291 LLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADEM 186
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 242 ILRLVG-TP 249
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 125
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 126 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 175
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 176 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 231 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 279
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 280 LLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 67
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 68 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 125
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 126 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 175
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 176 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 231 ILRLVG-TP 238
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 186
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 242 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 290
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 291 LLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 78
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 79 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 136
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 137 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 186
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 187 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 242 ILRLVG-TP 249
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF-------HS 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 82
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 140
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 141 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 190
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 191 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 246 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 294
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 295 LLEKMLVLDSDKRITAAQALAHAYFAQ 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 82
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 83 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 140
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 141 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 190
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 191 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 246 ILRLVG-TP 253
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 167
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGX 182
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 225
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 226 MLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS----- 280
LI +L G TP + + E+A +YI Q + F++ F
Sbjct: 233 KLILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLA 281
Query: 281 --IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 282 VDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKK 517
++ +L GL+YIH IHR +K S++ ++ + K GL T
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGX 182
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTL 575
+ + LNW+ Y++ DI+SVG EL G F T L
Sbjct: 183 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 576 MLIEKLAGATP 586
LI +L G TP
Sbjct: 233 KLILRLVG-TP 242
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 69
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 70 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 127
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 128 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 177
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 178 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 233 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 281
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 282 LLEKMLVLDSDKRITAAQALAHAYFAQ 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 69
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 70 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 127
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 128 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 177
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 178 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 233 ILRLVG-TP 240
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 68
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 126
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 127 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 176
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 177 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 232 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 280
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 281 LLEKMLVLDSDKRITAAQALAHAYFAQ 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 68
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 126
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 127 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 176
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 177 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 232 ILRLVG-TP 239
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 27 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 82
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HPNI F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 140
Query: 127 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
Y H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI--GTAY---YI 195
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 196 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 227
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 416
YK +LG+ + V L K K+T Q AVK K + + TD++ SL E+ ++
Sbjct: 27 RYKGQRVLGK--GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--SLLREVQLLKQ 82
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HPNI F D +LV + G D I + F E+ I++ VL+G+
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF--SEVDAARIIRQVLSGIT 140
Query: 477 YIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
Y H +HR +K ++L+ K + F +KK TAY ++
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI--GTAY---YI 195
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+PEVL YDE+ D++S G+ L +G PF
Sbjct: 196 APEVLHGT---YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 184
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 185 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 240 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 288
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 289 LLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 76
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 77 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 134
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 135 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 184
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 185 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 240 ILRLVG-TP 247
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 181
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 182 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 237 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 285
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 286 LLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 181
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 182 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 237 ILRLVG-TP 244
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 70
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 71 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 128
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 129 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 178
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 179 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 234 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 282
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 283 LLEKMLVLDSDKRITAAQALAHAYFAQ 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 70
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 71 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 128
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 129 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 178
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 179 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 234 ILRLVG-TP 241
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 181
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 182 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 237 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 285
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 286 LLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 73
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 74 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 131
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 132 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 181
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 182 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 237 ILRLVG-TP 244
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 68
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 126
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 127 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 176
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 177 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 232 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 280
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 281 LLEKMLVLDSDKRITAAQALAHAYFAQ 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 68
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 69 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 126
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 127 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 176
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 177 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 232 ILRLVG-TP 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 149
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 150 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 199
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 200 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 255 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 303
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 304 LLEKMLVLDSDKRITAAQALAHAYFAQ 330
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 149
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 150 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 199
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 200 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 255 ILRLVG-TP 262
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSKPFQSIIHAKRTYRE 83
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 141
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 142 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 191
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 192 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 247 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 295
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 296 LLEKMLVLDSDKRITAAQALAHAYFAQ 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSKPFQSIIHAKRTYRE 83
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 141
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 142 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 191
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 192 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 247 ILRLVG-TP 254
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 90
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 148
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 149 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 198
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 199 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 254 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 302
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 303 LLEKMLVLDSDKRITAAQALAHAYFAQ 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 90
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 91 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 148
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 149 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 198
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 199 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 254 ILRLVG-TP 261
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 185
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 186 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 241 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 289
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 290 LLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 185
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 186 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 241 ILRLVG-TP 248
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ + +G + ++ + + +K T +AVKK + + K + E
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 81
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 82 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 139
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 140 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 189
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 190 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF-------HS 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 245 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 293
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 294 LLEKMLVLDSDKRITAAQALAHAYFAQ 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ + +G + ++ + + +K T +AVKK + + K + E
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 81
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 82 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 139
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 140 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 189
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 190 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 245 ILRLVG-TP 252
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 185
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 186 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 241 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 289
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 290 LLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 77
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 135
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 136 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 185
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 186 TGYVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 241 ILRLVG-TP 248
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 68
++ I LG+ +VYL++ K ++A+K ++ E ++ L EI HLR
Sbjct: 15 DFDIVRPLGK--GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ + F D ++L+ G + H F E ++++ + L Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD--EQRSATFMEELADALHYC 130
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H + IHR +K ++L+ + G+ ++ + +P+ ++ + L++L PE++
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRXM-----CGTLDYLPPEMI 184
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF 218
E +DE+ D++ G+ C E G PF
Sbjct: 185 EGKT--HDEKVDLWCAGVLCYEFLVGMPPF 212
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 418
++ I LG+ +VYL++ K ++A+K ++ E ++ L EI HLR
Sbjct: 15 DFDIVRPLGK--GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ + F D ++L+ G + H F E ++++ + L Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD--EQRSATFMEELADALHYC 130
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
H + IHR +K ++L+ + G+ ++ + +P+ ++ + L++L PE++
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRXM-----CGTLDYLPPEMI 184
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
E +DE+ D++ G+ C E G PF
Sbjct: 185 EGKT--HDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 136/327 (41%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ S Y K + IAVKK + + K + E
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLK---IAVKKLSRPFQSIIHAKRTYRE 100
Query: 61 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMGFG-----SCKDLINAHFNFGL 109
+ ++H++H N+I + F AT D++LV+ LMG C+ L + H F
Sbjct: 101 LRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 158
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 159 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 208
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y+ DI+SVG EL G F T L
Sbjct: 209 TGYVATRWYR----APEIM-LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQ 263
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G P + A +YI+ + R F+D F
Sbjct: 264 IMRLTGTPPASVISRM---------PSHEARNYIN--SLPQMPKRNFADVFIGANPLAVD 312
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L H +F Q
Sbjct: 313 LLEKMLVLDTDKRITASEALAHPYFSQ 339
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 34/249 (13%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ S Y K + IAVKK + + K + E
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLK---IAVKKLSRPFQSIIHAKRTYRE 100
Query: 411 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMGFG-----SCKDLINAHFNFGL 459
+ ++H++H N+I + F AT D++LV+ LMG C+ L + H F
Sbjct: 101 LRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 158
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 159 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 208
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y+ DI+SVG EL G F T L
Sbjct: 209 TGYVATRWYR----APEIM-LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQ 263
Query: 578 IEKLAGATP 586
I +L G P
Sbjct: 264 IMRLTGTPP 272
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 141/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 149
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 150 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 199
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 200 XGXVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 255 ILRLVG-TPG--------AELLKKISSESARNYI--QSLAQMPKMNFANVFIGANPLAVD 303
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 304 LLEKMLVLDSDKRITAAQALAHAYFAQ 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGHRVAVKKLSRPFQSIIHAKRTYRE 91
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 92 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 149
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 150 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 199
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 200 XGXVATRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 255 ILRLVG-TP 262
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 142/327 (43%), Gaps = 52/327 (15%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 228 IEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS------- 280
I +L G TP + + E+A +YI Q + F++ F
Sbjct: 235 ILRLVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVD 283
Query: 281 IVELCLSRDVDKRPLACNLLQHAFFKQ 307
++E L D DKR A L HA+F Q
Sbjct: 284 LLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 35/249 (14%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++H++H N+I + F A D++LV+ LMG C+ L + H F
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-- 129
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
++ +L GL+YIH IHR +K S++ ++ + C + T ++
Sbjct: 130 -------LIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEM 179
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ + Y +PE++ N Y++ DI+SVG EL G F T L L
Sbjct: 180 TGYVATRWYR----APEIM-LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 578 IEKLAGATP 586
I +L G TP
Sbjct: 235 ILRLVG-TP 242
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 68
++ I LG+ +VYL++ K ++A+K ++ E ++ L EI HLR
Sbjct: 15 DFDIGRPLGK--GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ + F D ++L+ G + H F E ++++ + L Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD--EQRSATFMEELADALHYC 130
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H + IHR +K ++L+ + G+ ++ + +P+ ++ + L++L PE++
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRXM-----CGTLDYLPPEMI 184
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF 218
E +DE+ D++ G+ C E G PF
Sbjct: 185 EGKT--HDEKVDLWCAGVLCYEFLVGMPPF 212
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 418
++ I LG+ +VYL++ K ++A+K ++ E ++ L EI HLR
Sbjct: 15 DFDIGRPLGK--GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ + F D ++L+ G + H F E ++++ + L Y
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD--EQRSATFMEELADALHYC 130
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
H + IHR +K ++L+ + G+ ++ + +P+ ++ + L++L PE++
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRXM-----CGTLDYLPPEMI 184
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
E +DE+ D++ G+ C E G PF
Sbjct: 185 EGKT--HDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 68
++ I LG+ +VYL++ K ++A+K ++ E ++ L EI HLR
Sbjct: 16 DFDIGRPLGK--GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ + F D ++L+ G + H F E ++++ + L Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD--EQRSATFMEELADALHYC 131
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H + IHR +K ++L+ + G+ ++ + +P+ ++ + L++L PE++
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRXM-----CGTLDYLPPEMI 185
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF 218
E +DE+ D++ G+ C E G PF
Sbjct: 186 EGKT--HDEKVDLWCAGVLCYEFLVGMPPF 213
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 418
++ I LG+ +VYL++ K ++A+K ++ E ++ L EI HLR
Sbjct: 16 DFDIGRPLGK--GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ + F D ++L+ G + H F E ++++ + L Y
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD--EQRSATFMEELADALHYC 131
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
H + IHR +K ++L+ + G+ ++ + +P+ ++ + L++L PE++
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRXM-----CGTLDYLPPEMI 185
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
E +DE+ D++ G+ C E G PF
Sbjct: 186 EGKT--HDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 14/224 (6%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
NS D P NY++ +G+ N + V L++H +T + +AVK + ++ L+
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGK--GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ 59
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ M+ L HPNI+ L+LV G D + AH + E
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEAR 117
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F S
Sbjct: 118 AKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDTFCGS 176
Query: 526 TAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 177 PPY----AAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 214
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AVK + ++ L+ L E+ M+ L
Sbjct: 15 GNYRLQKTIGK--GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYC 130
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT-VGNKLDTFCGSPPY----AAPELF 185
Query: 189 E-QNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + DG + D++S+G+ L +G++PF
Sbjct: 186 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 8 PSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 66
PS+ +LG+ CF V H+ T +++ +K+ L R +E ++ E+ MR
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKV---THRETGEVMVMKE--LIRFDEETQRTFLKEVKVMRC 63
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HPN++ +I L+ ++ + G+ + +I + + P +D+ +G+
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMA 122
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLS----------------GLRYMCPFSPTKKKVH 170
Y+H IHR + + + L+ N ++ GLR + P +KK +
Sbjct: 123 YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK--KPDRKKRY 180
Query: 171 LFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ N W++PE++ N YDE+ D++S GI CE+
Sbjct: 181 ----TVVGNPYWMAPEMI--NGRSYDEKVDVFSFGIVLCEI 215
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 31/221 (14%)
Query: 358 PSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 416
PS+ +LG+ CF V H+ T +++ +K+ L R +E ++ E+ MR
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKV---THRETGEVMVMKE--LIRFDEETQRTFLKEVKVMRC 63
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HPN++ +I L+ ++ + G+ + +I + + P +D+ +G+
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMA 122
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLS----------------GLRYMCPFSPTKKKVH 520
Y+H IHR + + + L+ N ++ GLR + P +KK +
Sbjct: 123 YLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK--KPDRKKRY 180
Query: 521 LFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ N W++PE++ N YDE+ D++S GI CE+
Sbjct: 181 ----TVVGNPYWMAPEMI--NGRSYDEKVDVFSFGIVLCEI 215
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 42/322 (13%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ ++H++H N+I + F A D++LV+ LMG DL N + L + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKSQKLTDDHV 127
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 174
++ +L GL+YIH IHR +K S++ ++ + + + +C T ++ +
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG-LC--RHTDDEMTGYVA 184
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLMLIEKLA 232
+ Y +PE++ N Y++ DI+SVG EL G F T L LI +L
Sbjct: 185 TRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 233 GATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHS-------IVELC 285
G TP + + E+A +YI Q + F++ F ++E
Sbjct: 240 G-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVDLLEKM 288
Query: 286 LSRDVDKRPLACNLLQHAFFKQ 307
L D DKR A L HA+F Q
Sbjct: 289 LVLDSDKRITAAQALAHAYFAQ 310
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 25/244 (10%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ ++H++H N+I + F A D++LV+ LMG DL N + L + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKSQKLTDDHV 127
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 524
++ +L GL+YIH IHR +K S++ ++ + + + +C T ++ +
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG-LC--RHTDDEMTGYVA 184
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLMLIEKLA 582
+ Y +PE++ N Y++ DI+SVG EL G F T L LI +L
Sbjct: 185 TRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 583 GATP 586
G TP
Sbjct: 240 G-TP 242
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 90
HK TN AVK + D+ + EI + +R+ +HPNII + D +++V+
Sbjct: 43 HKATNXEFAVK------IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
Query: 91 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 149
L G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 97 LXKGGELLDKILRQKFFS--EREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 150 KACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGIS 207
+R +C F K + + + Y N+++PEVLE+ GYD DI+S+G+
Sbjct: 155 NP--ESIR-ICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQ--GYDAACDIWSLGVL 209
Query: 208 CCELANGTVPFAETP 222
G PFA P
Sbjct: 210 LYTXLTGYTPFANGP 224
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEI-VCMRHLRHPNIICYISSFLDATDLHLVSP 440
HK TN AVK + D+ + EI + +R+ +HPNII + D +++V+
Sbjct: 43 HKATNXEFAVK------IIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
Query: 441 LMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNG 499
L G D I F E +L + +EY+H +G +HR +K S+IL + +G
Sbjct: 97 LXKGGELLDKILRQKFFS--EREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 500 KACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGIS 557
+R +C F K + + + Y N+++PEVLE+ GYD DI+S+G+
Sbjct: 155 NP--ESIR-ICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQ--GYDAACDIWSLGVL 209
Query: 558 CCELANGTVPFAETP 572
G PFA P
Sbjct: 210 LYTXLTGYTPFANGP 224
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y++ +G N L + K +N+L+AVK DE++K EI+ R LRH
Sbjct: 20 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 128
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 187
H HR +K + L+ + L +C F +K V H P ST +++PEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLK----ICAFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 188 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y++ +G N L + K +N+L+AVK DE++K EI+ R LRH
Sbjct: 20 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 478
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 537
H HR +K + L+ + L +C F +K V H P ST +++PEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLK----ICAFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 538 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 20/227 (8%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
+S + D P NY++ +G+ N + V L++H +T + +AVK + ++ L+
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ 58
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ M+ L HPNI+ L+LV G D + AH + E
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEAR 116
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF--- 522
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDAFCGA 175
Query: 523 PPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
PP A PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 176 PPYAA-------PELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AVK + ++ L+ L E+ M+ L
Sbjct: 14 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYC 129
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF---PPSTAYNLNWLSP 185
H K +HR +KA ++L+ + ++ + F+ K+ F PP A P
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDAFCGAPPYAA-------P 181
Query: 186 EVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 218
E+ + + DG + D++S+G+ L +G++PF
Sbjct: 182 ELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
+S + D P NY++ +G+ N + V L++H +T + +AVK + ++ L+
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ 58
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ M+ L HPNI+ L+LV G D + AH + E
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEAR 116
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F S
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGS 175
Query: 526 TAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 176 PPY----AAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AVK + ++ L+ L E+ M+ L
Sbjct: 14 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYC 129
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPY----AAPELF 184
Query: 189 E-QNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + DG + D++S+G+ L +G++PF
Sbjct: 185 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y++ +G N L + K +N+L+AVK DE++K EI+ R LRH
Sbjct: 19 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 73
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 128
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 74 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 130
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 187
H HR +K + L+ + L +C F +K V H P ST +++PEV
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 186
Query: 188 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
L++ DG + +D++S G++ + G PF +
Sbjct: 187 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 218
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y++ +G N L + K +N+L+AVK DE++K EI+ R LRH
Sbjct: 19 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 73
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 478
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 74 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 130
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 537
H HR +K + L+ + L +C F +K V H P ST +++PEV
Sbjct: 131 HAMQVCHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 186
Query: 538 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
L++ DG + +D++S G++ + G PF +
Sbjct: 187 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
+S + D P NY++ +G+ N + V L++H +T + +AVK + ++ L+
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ 58
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ M+ L HPNI+ L+LV G D + AH + E
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEAR 116
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F S
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGS 175
Query: 526 TAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 176 PPY----AAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AVK + ++ L+ L E+ M+ L
Sbjct: 14 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYC 129
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPY----AAPELF 184
Query: 189 E-QNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + DG + D++S+G+ L +G++PF
Sbjct: 185 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
N L + K+T +L+AVK DE+++ EI+ R LRHPNI+ + L
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REIINHRSLRHPNIVRFKEVILT 87
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
T L ++ M + S +L N G E Q +L+G+ Y H HR +K
Sbjct: 88 PTHLAII---MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKL 144
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV-LEQNLDGYDER 198
+ L+ + L +C F +K V H P ST +++PEV L Q DG +
Sbjct: 145 ENTLLDGSPAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDG--KI 198
Query: 199 SDIYSVGISCCELANGTVPFAE 220
+D++S G++ + G PF +
Sbjct: 199 ADVWSCGVTLYVMLVGAYPFED 220
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N L + K+T +L+AVK DE+++ EI+ R LRHPNI+ + L
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ---REIINHRSLRHPNIVRFKEVILT 87
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
T L ++ M + S +L N G E Q +L+G+ Y H HR +K
Sbjct: 88 PTHLAII---MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKL 144
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV-LEQNLDGYDER 548
+ L+ + L +C F +K V H P ST +++PEV L Q DG +
Sbjct: 145 ENTLLDGSPAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDG--KI 198
Query: 549 SDIYSVGISCCELANGTVPFAE 570
+D++S G++ + G PF +
Sbjct: 199 ADVWSCGVTLYVMLVGAYPFED 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 51/285 (17%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 90
+H + Q++AVK+ + E + L + MR + P + + + D+ +
Sbjct: 71 RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130
Query: 91 LMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISH 147
LM S + G +PE ++ I ++ LE++H K IHR VK S++LI+
Sbjct: 131 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 189
Query: 148 NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN-----WLSPEVL--EQNLDGYDERSD 200
G+ MC F + V S A ++ +++PE + E N GY +SD
Sbjct: 190 LGQV------KMCDFGISGYLVD----SVAKTIDAGCKPYMAPERINPELNQKGYSVKSD 239
Query: 201 IYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
I+S+GI+ ELA P+ T ++++
Sbjct: 240 IWSLGITMIELAILRFPYDSWGTPFQQLKQVV---------------------------- 271
Query: 261 ISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
E+ + L + KFS F CL ++ +RP L+QH FF
Sbjct: 272 --EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 21/211 (9%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 440
+H + Q++AVK+ + E + L + MR + P + + + D+ +
Sbjct: 71 RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130
Query: 441 LMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISH 497
LM S + G +PE ++ I ++ LE++H K IHR VK S++LI+
Sbjct: 131 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 189
Query: 498 NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN-----WLSPEVL--EQNLDGYDERSD 550
G+ MC F + V S A ++ +++PE + E N GY +SD
Sbjct: 190 LGQV------KMCDFGISGYLVD----SVAKTIDAGCKPYMAPERINPELNQKGYSVKSD 239
Query: 551 IYSVGISCCELANGTVPFAETPTTLMLIEKL 581
I+S+GI+ ELA P+ T ++++
Sbjct: 240 IWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 15/240 (6%)
Query: 334 NNELECMFNINDTFNSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK- 392
N ++ N + + L +Y + ++G+ V L +HK + ++ A+K
Sbjct: 50 NKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGR--GAFGEVQLVRHKASQKVYAMKL 107
Query: 393 --KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDL 450
KF + + +D E M P ++ +F D L++V M G DL
Sbjct: 108 LSKFEMIKRSDSAF--FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGG---DL 162
Query: 451 INAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMC 510
+N N+ +PE +V+ L+ IH G IHR VK ++L+ +G L+ C
Sbjct: 163 VNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG-TC 221
Query: 511 PFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERS-DIYSVGISCCELANGTVPF 568
VH + +++SPEVL+ Q DGY R D +SVG+ E+ G PF
Sbjct: 222 MKMDETGMVHC--DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVK---KFNLDRMTDEDLKSLHHEIVCMRH 66
+Y + ++G+ V L +HK + ++ A+K KF + + +D E M
Sbjct: 76 DYDVVKVIGR--GAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF--FWEERDIMAF 131
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
P ++ +F D L++V M G DL+N N+ +PE +V+ L+
Sbjct: 132 ANSPWVVQLFCAFQDDKYLYMVMEYMPGG---DLVNLMSNYDVPEKWAKFYTAEVVLALD 188
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
IH G IHR VK ++L+ +G L+ C VH + +++SPE
Sbjct: 189 AIHSMGLIHRDVKPDNMLLDKHGHLKLADFG-TCMKMDETGMVHC--DTAVGTPDYISPE 245
Query: 187 VLE-QNLDGYDERS-DIYSVGISCCELANGTVPF 218
VL+ Q DGY R D +SVG+ E+ G PF
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK E + E+ M+ LRHPNI+ ++ + +L +V+ + GS
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 99 DLI-NAHFNFGLPELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILI--SHNGKACL 153
L+ + L E + DV G+ Y+H + +HR +K+ ++L+ + K C
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182
Query: 154 SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 213
GL S K L S A W++PEVL + +E+SD+YS G+ ELA
Sbjct: 183 FGL------SRLKASTFLSSKSAAGTPEWMAPEVLRD--EPSNEKSDVYSFGVILWELAT 234
Query: 214 GTVPFA 219
P+
Sbjct: 235 LQQPWG 240
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK E + E+ M+ LRHPNI+ ++ + +L +V+ + GS
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 449 DLI-NAHFNFGLPELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILI--SHNGKACL 503
L+ + L E + DV G+ Y+H + +HR +K+ ++L+ + K C
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182
Query: 504 SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 563
GL S K L S A W++PEVL + +E+SD+YS G+ ELA
Sbjct: 183 FGL------SRLKASTFLSSKSAAGTPEWMAPEVLRD--EPSNEKSDVYSFGVILWELAT 234
Query: 564 GTVPFA 569
P+
Sbjct: 235 LQQPWG 240
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ ++H++H N+I + F A D++LV+ LMG DL N L + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKXQKLTDDHV 127
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKKKVHLF 172
++ +L GL+YIH IHR +K S++ ++ + K GL T +
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRW 187
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLMLIEK 230
+ LNW+ Y++ DI+SVG EL G F T L LI +
Sbjct: 188 YRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 231 LAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF-------HSIVE 283
L G TP + + E+A +YI Q + F++ F ++E
Sbjct: 238 LVG-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVDLLE 286
Query: 284 LCLSRDVDKRPLACNLLQHAFFKQ 307
L D DKR A L HA+F Q
Sbjct: 287 KMLVLDSDKRITAAQALAHAYFAQ 310
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 29/246 (11%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ ++H++H N+I + F A D++LV+ LMG DL N L + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKXQKLTDDHV 127
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKKKVHLF 522
++ +L GL+YIH IHR +K S++ ++ + K GL T +
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRW 187
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLMLIEK 580
+ LNW+ Y++ DI+SVG EL G F T L LI +
Sbjct: 188 YRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Query: 581 LAGATP 586
L G TP
Sbjct: 238 LVG-TP 242
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
+S + D P NY++ +G+ N + V L++H +T + +AV+ + ++ L+
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGK--GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ 58
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ M+ L HPNI+ L+LV G D + AH + E
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEAR 116
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F S
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGS 175
Query: 526 TAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 176 PPY----AAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AV+ + ++ L+ L E+ M+ L
Sbjct: 14 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYC 129
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPY----AAPELF 184
Query: 189 E-QNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + DG + D++S+G+ L +G++PF
Sbjct: 185 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
NS D P NY++ +G+ N + V L++H +T + +A+K + ++ L+
Sbjct: 2 NSIASCADEQPHIGNYRLLKTIGK--GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ 59
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ M+ L HPNI+ L+L+ G D + AH + E
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEAR 117
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF--- 522
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F
Sbjct: 118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDAFCGA 176
Query: 523 PPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
PP A PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 177 PPYAA-------PELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 214
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +A+K + ++ L+ L E+ M+ L
Sbjct: 15 GNYRLLKTIGK--GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+L+ G D + AH + E + +++ ++Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYC 130
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF---PPSTAYNLNWLSP 185
H K +HR +KA ++L+ + ++ + F+ K+ F PP A P
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDAFCGAPPYAA-------P 182
Query: 186 EVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 218
E+ + + DG + D++S+G+ L +G++PF
Sbjct: 183 ELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + KD ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 232
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 306 KQTKK 310
+ K
Sbjct: 291 QDVTK 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + KD ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AVK + ++ L+ L E+ M+ L
Sbjct: 7 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GWMKEKEARAKFRQIVSAVQYC 122
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYA----APELF 177
Query: 189 E-QNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + DG + D++S+G+ L +G++PF
Sbjct: 178 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 206
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
NY++ +G+ N + V L++H +T + +AVK + ++ L+ L E+ M+ L
Sbjct: 7 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GWMKEKEARAKFRQIVSAVQYC 122
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYA----APELF 177
Query: 539 E-QNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + DG + D++S+G+ L +G++PF
Sbjct: 178 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 206
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y++ +G N L + K +N+L+AVK DE++K EI+ R LRH
Sbjct: 20 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 128
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 187
H HR +K + L+ + L +C F +K V H P T +++PEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLK----ICAFGYSKSSVLHSQPKDTVGTPAYIAPEV 187
Query: 188 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y++ +G N L + K +N+L+AVK DE++K EI+ R LRH
Sbjct: 20 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 478
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 537
H HR +K + L+ + L +C F +K V H P T +++PEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLK----ICAFGYSKSSVLHSQPKDTVGTPAYIAPEV 187
Query: 538 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 139/330 (42%), Gaps = 58/330 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP + +G + ++ S Y ++ + Q +AVKK + + + + E
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLR---QKVAVKKLSRPFQSLIHARRTYRE 77
Query: 61 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++HL+H N+I + F AT +++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-- 135
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL--SGLRYMCPFSPTKK 167
++ +L GL+YIH G IHR +K S++ ++ + + + GL T
Sbjct: 136 -------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY 188
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTV--PFAETPTTL 225
+ + LNW+ Y++ DI+SVG EL G P ++ L
Sbjct: 189 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQL 238
Query: 226 MLIEKLAGA-TPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVEL 284
I ++ G +P +L + E+A +YI Q + + S F L
Sbjct: 239 KRIMEVVGTPSPEVLAKIS----------SEHARTYI--QSLPPMPQKDLSSIFRGANPL 286
Query: 285 C---LSR----DVDKRPLACNLLQHAFFKQ 307
L R D D+R A L HA+F Q
Sbjct: 287 AIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP + +G + ++ S Y ++ + Q +AVKK + + + + E
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLR---QKVAVKKLSRPFQSLIHARRTYRE 77
Query: 411 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++HL+H N+I + F AT +++LV+ LMG C+ L + H F
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-- 135
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL--SGLRYMCPFSPTKK 517
++ +L GL+YIH G IHR +K S++ ++ + + + GL T
Sbjct: 136 -------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY 188
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + LNW+ Y++ DI+SVG EL G F
Sbjct: 189 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 14/224 (6%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
+S + D P NY++ +G+ N + V L++H +T + +AV+ + ++ L+
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGK--GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ 58
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ M+ L HPNI+ L+LV G D + AH + E
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEAR 116
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F S
Sbjct: 117 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDEFCGS 175
Query: 526 TAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 176 PPY----AAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AV+ + ++ L+ L E+ M+ L
Sbjct: 14 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH + E + +++ ++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYC 129
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-FGNKLDEFCGSPPY----AAPELF 184
Query: 189 E-QNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + DG + D++S+G+ L +G++PF
Sbjct: 185 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +A+K + ++ L+ L E+ M+ L
Sbjct: 12 GNYRLLKTIGK--GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN 69
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+L+ G D + AH + E + +++ ++Y
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYC 127
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDTFCGSPPYA----APELF 182
Query: 189 E-QNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + DG + D++S+G+ L +G++PF
Sbjct: 183 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 211
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
NY++ +G+ N + V L++H +T + +A+K + ++ L+ L E+ M+ L
Sbjct: 12 GNYRLLKTIGK--GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN 69
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ L+L+ G D + AH + E + +++ ++Y
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYC 127
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
H K +HR +KA ++L+ + ++ + F+ K+ F S Y +PE+
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-VGGKLDTFCGSPPYA----APELF 182
Query: 539 E-QNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + DG + D++S+G+ L +G++PF
Sbjct: 183 QGKKYDGPE--VDVWSLGVILYTLVSGSLPF 211
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + KD ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 231
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 306 KQTKK 310
+ K
Sbjct: 290 QDVTK 294
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + KD ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 142/322 (44%), Gaps = 42/322 (13%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 61 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ ++H++H N+I + F A D++LV+ LMG DL N L + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKXQKLTDDHV 127
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 174
++ +L GL+YIH IHR +K S++ ++ + C + T ++ +
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEMTGYVA 184
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLMLIEKLA 232
+ Y +PE++ N Y++ DI+SVG EL G F T L LI +L
Sbjct: 185 TRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 233 GATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSF-------HSIVELC 285
G TP + + E+A +YI Q + F++ F ++E
Sbjct: 240 G-TPG--------AELLKKISSESARNYI--QSLTQMPKMNFANVFIGANPLAVDLLEKM 288
Query: 286 LSRDVDKRPLACNLLQHAFFKQ 307
L D DKR A L HA+F Q
Sbjct: 289 LVLDSDKRITAAQALAHAYFAQ 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 25/244 (10%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP Y+ S +G + ++ + + +K T +AVKK + + K + E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTK---TGLRVAVKKLSRPFQSIIHAKRTYRE 71
Query: 411 IVCMRHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ ++H++H N+I + F A D++LV+ LMG DL N L + +
Sbjct: 72 LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG----ADLNNIVKXQKLTDDHV 127
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 524
++ +L GL+YIH IHR +K S++ ++ + C + T ++ +
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDEMTGYVA 184
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLMLIEKLA 582
+ Y +PE++ N Y++ DI+SVG EL G F T L LI +L
Sbjct: 185 TRWYR----APEIM-LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
Query: 583 GATP 586
G TP
Sbjct: 240 G-TP 242
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 51/285 (17%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 90
+H + Q++AVK+ + E + L + MR + P + + + D+ +
Sbjct: 27 RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86
Query: 91 LMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISH 147
LM S + G +PE ++ I ++ LE++H K IHR VK S++LI+
Sbjct: 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 145
Query: 148 NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN-----WLSPEVL--EQNLDGYDERSD 200
G+ MC F + V A +++ +++PE + E N GY +SD
Sbjct: 146 LGQV------KMCDFGISGYLVD----DVAKDIDAGCKPYMAPERINPELNQKGYSVKSD 195
Query: 201 IYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
I+S+GI+ ELA P+ T +++
Sbjct: 196 IWSLGITMIELAILRFPYDSWGTPFQQLKQ------------------------------ 225
Query: 261 ISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
+ E+ + L + KFS F CL ++ +RP L+QH FF
Sbjct: 226 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 21/212 (9%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 440
+H + Q++AVK+ + E + L + MR + P + + + D+ +
Sbjct: 27 RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86
Query: 441 LMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISH 497
LM S + G +PE ++ I ++ LE++H K IHR VK S++LI+
Sbjct: 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 145
Query: 498 NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN-----WLSPEVL--EQNLDGYDERSD 550
G+ MC F + V A +++ +++PE + E N GY +SD
Sbjct: 146 LGQV------KMCDFGISGYLVD----DVAKDIDAGCKPYMAPERINPELNQKGYSVKSD 195
Query: 551 IYSVGISCCELANGTVPFAETPTTLMLIEKLA 582
I+S+GI+ ELA P+ T ++++
Sbjct: 196 IWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 6 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 128
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 120
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 177 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 222
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 6 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 478
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 120
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 177 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 222
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 7 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 128
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 121
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 178 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 7 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 478
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 121
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 178 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 30 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 128
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 144
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 200
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 201 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 246
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 30 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 478
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 144
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 200
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 201 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 246
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 48/325 (14%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP + +G + ++ S Y ++ + Q +AVKK + + + + E
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLR---QKVAVKKLSRPFQSLIHARRTYRE 77
Query: 61 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ ++HL+H N+I + F AT +++LV+ LMG DL N + L + +
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG----ADLNNIVKSQALSDEHV 133
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL--SGLRYMCPFSPTKKKVHLF 172
++ +L GL+YIH G IHR +K S++ ++ + + + GL T +
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW 193
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTV--PFAETPTTLMLIEK 230
+ LNW+ Y++ DI+SVG EL G P ++ L I +
Sbjct: 194 YRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
Query: 231 LAGA-TPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELC---L 286
+ G +P +L + E+A +YI Q + + S F L L
Sbjct: 244 VVGTPSPEVLAKIS----------SEHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLL 291
Query: 287 SR----DVDKRPLACNLLQHAFFKQ 307
R D D+R A L HA+F Q
Sbjct: 292 GRMLVLDSDQRVSAAEALAHAYFSQ 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP + +G + ++ S Y ++ + Q +AVKK + + + + E
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLR---QKVAVKKLSRPFQSLIHARRTYRE 77
Query: 411 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ ++HL+H N+I + F AT +++LV+ LMG DL N + L + +
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG----ADLNNIVKSQALSDEHV 133
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL--SGLRYMCPFSPTKKKVHLF 522
++ +L GL+YIH G IHR +K S++ ++ + + + GL T +
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW 193
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ LNW+ Y++ DI+SVG EL G F
Sbjct: 194 YRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 7 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 128
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 121
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 178 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
NY + LG+ S V HK T A K N +++ D + L E R L+H
Sbjct: 7 NYDVKEELGK--GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYI 478
PNI+ S + + +LV L+ G +D++ F E H +Q +L + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYC 121
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLR--YMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
H G +HR +K ++L++ K L + + H F + Y LSPE
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY----LSPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
VL++ D Y + DI++ G+ L G PF + + + AGA
Sbjct: 178 VLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK E + E+ M+ LRHPNI+ ++ + +L +V+ + GS
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 99 DLI-NAHFNFGLPELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILI--SHNGKACL 153
L+ + L E + DV G+ Y+H + +HR +K+ ++L+ + K C
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCD 182
Query: 154 SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 213
GL S K L A W++PEVL + +E+SD+YS G+ ELA
Sbjct: 183 FGL------SRLKASXFLXSKXAAGTPEWMAPEVLRD--EPSNEKSDVYSFGVILWELAT 234
Query: 214 GTVPFA 219
P+
Sbjct: 235 LQQPWG 240
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK E + E+ M+ LRHPNI+ ++ + +L +V+ + GS
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 449 DLI-NAHFNFGLPELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILI--SHNGKACL 503
L+ + L E + DV G+ Y+H + +HR +K+ ++L+ + K C
Sbjct: 123 RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCD 182
Query: 504 SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 563
GL S K L A W++PEVL + +E+SD+YS G+ ELA
Sbjct: 183 FGL------SRLKASXFLXSKXAAGTPEWMAPEVLRD--EPSNEKSDVYSFGVILWELAT 234
Query: 564 GTVPFA 569
P+
Sbjct: 235 LQQPWG 240
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + KD ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + KD ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 33/288 (11%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVS 89
++K T +++A+KKF L+ D+ +K + EI ++ LRH N++ + +LV
Sbjct: 45 RNKDTGRIVAIKKF-LESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103
Query: 90 PLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG 149
+ DL F GL V+ L ++NG+ + H IHR +K +IL+S
Sbjct: 104 EFVDHTILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ-- 159
Query: 150 KACLSGLRYMCPFSPTKKKVHLFPPSTAYN----LNWL-SPEVLEQNLDGYDERSDIYSV 204
SG+ +C F + L P Y+ W +PE+L ++ Y + D++++
Sbjct: 160 ----SGVVKLCDFGFART---LAAPGEVYDDEVATRWYRAPELLVGDVK-YGKAVDVWAI 211
Query: 205 GISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEEN---ACSYI 261
G E+ G F I++L H++ C + Q+ +N A +
Sbjct: 212 GCLVTEMFMGEPLFPGDSD----IDQLY----HIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 262 SEQQTQVLTSRKFSDSFHSIVEL---CLSRDVDKRPLACNLLQHAFFK 306
E + + R++ +++L CL D DKRP LL H FF+
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVS 439
++K T +++A+KKF L+ D+ +K + EI ++ LRH N++ + +LV
Sbjct: 45 RNKDTGRIVAIKKF-LESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103
Query: 440 PLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG 499
+ DL F GL V+ L ++NG+ + H IHR +K +IL+S
Sbjct: 104 EFVDHTILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ-- 159
Query: 500 KACLSGLRYMCPFSPTKKKVHLFPPSTAYN----LNWL-SPEVLEQNLDGYDERSDIYSV 554
SG+ +C F + L P Y+ W +PE+L ++ Y + D++++
Sbjct: 160 ----SGVVKLCDFGFART---LAAPGEVYDDEVATRWYRAPELLVGDVK-YGKAVDVWAI 211
Query: 555 GISCCELANGTVPF 568
G E+ G F
Sbjct: 212 GCLVTEMFMGEPLF 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 20/227 (8%)
Query: 348 NSSVETLDNVP--SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK 405
+S + D P NY++ +G+ N + V L++H +T + +AVK + ++ L+
Sbjct: 1 GNSATSADEQPHIGNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ 58
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC 465
L E+ + L HPNI+ L+LV G D + AH E
Sbjct: 59 KLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK 118
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF--- 522
+ +++ ++Y H K +HR +KA ++L+ + ++ + F+ K+ F
Sbjct: 119 --FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDAFCGA 175
Query: 523 PPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
PP A PE+ + + DG + D++S+G+ L +G++PF
Sbjct: 176 PPYAA-------PELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
NY++ +G+ N + V L++H +T + +AVK + ++ L+ L E+ + L
Sbjct: 14 GNYRLLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLN 71
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ L+LV G D + AH E + +++ ++Y
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK--FRQIVSAVQYC 129
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF---PPSTAYNLNWLSP 185
H K +HR +KA ++L+ + ++ + F+ K+ F PP A P
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFT-FGNKLDAFCGAPPYAA-------P 181
Query: 186 EVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 218
E+ + + DG + D++S+G+ L +G++PF
Sbjct: 182 ELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPF 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 32 HKVTNQLIAVK--KFNLDRMTDEDLKSLH----HEIVCMRHLR-HPNIICYISSFLDATD 84
H+ T AVK + +R++ E L+ + E +R + HP+II I S+ ++
Sbjct: 115 HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
+ LV LM G D + L E I++ +L + ++H +HR +K +IL
Sbjct: 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENIL 232
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLD----GYDERSD 200
+ N + LS + C P +K L +L+PE+L+ ++D GY + D
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLREL-----CGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 201 IYSVGISCCELANGTVPFAETPTTLML 227
+++ G+ L G+ PF LML
Sbjct: 288 LWACGVILFTLLAGSPPFWHRRQILML 314
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 382 HKVTNQLIAVK--KFNLDRMTDEDLKSLH----HEIVCMRHLR-HPNIICYISSFLDATD 434
H+ T AVK + +R++ E L+ + E +R + HP+II I S+ ++
Sbjct: 115 HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
+ LV LM G D + L E I++ +L + ++H +HR +K +IL
Sbjct: 175 MFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENIL 232
Query: 495 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLD----GYDERSD 550
+ N + LS + C P +K L +L+PE+L+ ++D GY + D
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLREL-----CGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 551 IYSVGISCCELANGTVPFAETPTTLML 577
+++ G+ L G+ PF LML
Sbjct: 288 LWACGVILFTLLAGSPPFWHRRQILML 314
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 138/330 (41%), Gaps = 58/330 (17%)
Query: 2 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+T+ VP + +G + ++ S Y ++ + Q +AVKK + + + + E
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLR---QKVAVKKLSRPFQSLIHARRTYRE 69
Query: 61 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMG-----FGSCKDLINAHFNFGL 109
+ ++HL+H N+I + F AT +++LV+ LMG C+ L + H F
Sbjct: 70 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-- 127
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL--SGLRYMCPFSPTKK 167
++ +L GL+YIH G IHR +K S++ ++ + + + GL T
Sbjct: 128 -------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY 180
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTV--PFAETPTTL 225
+ + LNW+ Y++ DI+SVG EL G P ++ L
Sbjct: 181 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQL 230
Query: 226 MLIEKLAGA-TPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVEL 284
I ++ G +P +L + E+A +YI Q + + S F L
Sbjct: 231 KRIMEVVGTPSPEVLAKIS----------SEHARTYI--QSLPPMPQKDLSSIFRGANPL 278
Query: 285 C-------LSRDVDKRPLACNLLQHAFFKQ 307
L D D+R A L HA+F Q
Sbjct: 279 AIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 36/231 (15%)
Query: 352 ETLDNVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 410
+T+ VP + +G + ++ S Y ++ + Q +AVKK + + + + E
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLR---QKVAVKKLSRPFQSLIHARRTYRE 69
Query: 411 IVCMRHLRHPNIICYISSFLDAT------DLHLVSPLMG-----FGSCKDLINAHFNFGL 459
+ ++HL+H N+I + F AT +++LV+ LMG C+ L + H F
Sbjct: 70 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-- 127
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL--SGLRYMCPFSPTKK 517
++ +L GL+YIH G IHR +K S++ ++ + + + GL T
Sbjct: 128 -------LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY 180
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + LNW+ Y++ DI+SVG EL G F
Sbjct: 181 VATRWYRAPEIMLNWMH----------YNQTVDIWSVGCIMAELLQGKALF 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 39/307 (12%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 36 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 94
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 140
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 95 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 152
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 200
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 153 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 204
Query: 201 IYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
I+S+G+S E+A G P ++ + E LLD Y
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSMAIFE--------LLD-------------------Y 237
Query: 261 ISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELLR 320
I + L S FS F V CL ++ +R L+ HAF K++ V L
Sbjct: 238 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLC 297
Query: 321 PALSLNE 327
+ LN+
Sbjct: 298 STIGLNQ 304
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 36 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 94
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 95 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 152
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 153 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 204
Query: 551 IYSVGISCCELANGTVPFAETPTTLMLIEKL 581
I+S+G+S E+A G P ++ + E L
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 68
+++I LG+ +VYL++ K ++ ++A+K ++ E ++ L EI HL
Sbjct: 24 DFEIGRPLGK--GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ + F D ++L+ G + F E I++++ + L Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD--EQRTATIMEELADALMYC 139
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
HGK IHR +K ++L+ G+ ++ + ++K + L++L PE++
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK------TMCGTLDYLPPEMI 193
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF 218
E + ++E+ D++ +G+ C EL G PF
Sbjct: 194 EGRM--HNEKVDLWCIGVLCYELLVGNPPF 221
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLR 418
+++I LG+ +VYL++ K ++ ++A+K ++ E ++ L EI HL
Sbjct: 24 DFEIGRPLGK--GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ + F D ++L+ G + F E I++++ + L Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFD--EQRTATIMEELADALMYC 139
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
HGK IHR +K ++L+ G+ ++ + ++K + L++L PE++
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK------TMCGTLDYLPPEMI 193
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
E + ++E+ D++ +G+ C EL G PF
Sbjct: 194 EGRM--HNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 232
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 306 KQTKK 310
+ K
Sbjct: 291 QDVTK 295
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 11 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 182
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 183 -LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 236
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 306 KQTKK 310
+ K
Sbjct: 295 QDVTK 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 11 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 182
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 183 -LGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y++ +G N L + K N+L+AVK DE++K EI+ R LRH
Sbjct: 20 RYELVKDIGA--GNFGVARLMRDKQANELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 128
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYA 131
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 187
H HR +K + L+ + L + F +K V H P S +++PEV
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLK----IADFGYSKASVLHSQPKSAVGTPAYIAPEV 187
Query: 188 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y++ +G N L + K N+L+AVK DE++K EI+ R LRH
Sbjct: 20 RYELVKDIGA--GNFGVARLMRDKQANELVAVKYIERGEKIDENVK---REIINHRSLRH 74
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 478
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYA 131
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 537
H HR +K + L+ + L + F +K V H P S +++PEV
Sbjct: 132 HAMQVAHRDLKLENTLLDGSPAPRLK----IADFGYSKASVLHSQPKSAVGTPAYIAPEV 187
Query: 538 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 230
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 306 KQTKK 310
+ K
Sbjct: 289 QDVTK 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 32/284 (11%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLV 88
T +A+KK ++ K + E+ ++H+RH N+I + F D TD +LV
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 89 SPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN 148
P MG K + H G E I ++ +L GL YIH G IHR +K ++ ++ +
Sbjct: 109 MPFMGTDLGK--LMKHEKLG--EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED 164
Query: 149 --GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 206
K GL V + + LNW+ Y + DI+SVG
Sbjct: 165 CELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMR----------YTQTVDIWSVGC 214
Query: 207 SCCELANGTVPFAETP--TTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQ 264
E+ G F + L I K+ G P +V Q D +N + E
Sbjct: 215 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP------AEFVQRLQSDEAKNYMKGLPEL 268
Query: 265 QTQVLTS--RKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFK 306
+ + S S +++E L D ++R A L H +F+
Sbjct: 269 EKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 24/212 (11%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLV 438
T +A+KK ++ K + E+ ++H+RH N+I + F D TD +LV
Sbjct: 49 TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 439 SPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN 498
P MG K + H G E I ++ +L GL YIH G IHR +K ++ ++ +
Sbjct: 109 MPFMGTDLGK--LMKHEKLG--EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED 164
Query: 499 --GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 556
K GL V + + LNW+ Y + DI+SVG
Sbjct: 165 CELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMR----------YTQTVDIWSVGC 214
Query: 557 SCCELANGTVPFAETP--TTLMLIEKLAGATP 586
E+ G F + L I K+ G P
Sbjct: 215 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 246
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 45/292 (15%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT------DLH 86
K + + +A+KK + ++ K + E++ ++H++H N+I + F A+ D +
Sbjct: 64 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 146
LV P M + ++ F+ E I +++ +L GL+YIH G +HR +K ++ ++
Sbjct: 124 LVMPFMQ-TDLQKIMGMEFS----EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 178
Query: 147 HN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ K GL T V + + L+W+ Y++ DI+SV
Sbjct: 179 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH----------YNQTVDIWSV 228
Query: 205 GISCCELANGTVPF--AETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYIS 262
G E+ G F + L I K+ G T +V Q ++ A SYI
Sbjct: 229 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP------GTEFV---QKLNDKAAKSYI- 278
Query: 263 EQQTQVLTSRK-FSDSF-------HSIVELCLSRDVDKRPLACNLLQHAFFK 306
Q+ T RK F+ F ++E L DVDKR A L H FF+
Sbjct: 279 --QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT------DLH 436
K + + +A+KK + ++ K + E++ ++H++H N+I + F A+ D +
Sbjct: 64 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 123
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 496
LV P M + ++ F+ E I +++ +L GL+YIH G +HR +K ++ ++
Sbjct: 124 LVMPFMQ-TDLQKIMGMEFS----EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 178
Query: 497 HN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
+ K GL T V + + L+W+ Y++ DI+SV
Sbjct: 179 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH----------YNQTVDIWSV 228
Query: 555 GISCCELANGTVPF 568
G E+ G F
Sbjct: 229 GCIMAEMLTGKTLF 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 97
+AVK N+ T + L++ +E+ +R RH NI+ ++ + A L +V+ G
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTAPQLAIVTQWCEGSSLY 107
Query: 98 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
L + F + +L+ I + G++Y+H K IHR +K+++I + H G
Sbjct: 108 HHLHASETKFEMKKLI--DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDF 164
Query: 158 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 216
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G +
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 217 PFAETPTTLMLIE 229
P++ +IE
Sbjct: 224 PYSNINNRDQIIE 236
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 447
+AVK N+ T + L++ +E+ +R RH NI+ ++ + A L +V+ G
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTAPQLAIVTQWCEGSSLY 107
Query: 448 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
L + F + +L+ I + G++Y+H K IHR +K+++I + H G
Sbjct: 108 HHLHASETKFEMKKLI--DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDF 164
Query: 508 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 566
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G +
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 567 PFAETPTTLMLIE 579
P++ +IE
Sbjct: 224 PYSNINNRDQIIE 236
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 11 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 182
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 183 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 236
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 237 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 306 KQTKK 310
+ K
Sbjct: 295 QDVTK 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 11 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 182
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 183 -LGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 20/306 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L
Sbjct: 7 ENFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ + L+LV + K ++A G+P +I L +L GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEV 187
H +HR +K ++LI+ G L+ F P + H L + +PE+
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEI 178
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTY 244
L Y DI+S+G E+ F +E + L TP D +
Sbjct: 179 L-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVW 232
Query: 245 YVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAF 304
T D + + + + ++V+ + S++ L D +KR A L H F
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
Query: 305 FKQTKK 310
F+ K
Sbjct: 291 FQDVTK 296
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L
Sbjct: 7 ENFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ + L+LV + K ++A G+P +I L +L GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEV 537
H +HR +K ++LI+ G L+ F P + H L + +PE+
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEI 178
Query: 538 LEQNLDGYDERSDIYSVGISCCELAN 563
L Y DI+S+G E+
Sbjct: 179 L-LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 129/314 (41%), Gaps = 73/314 (23%)
Query: 61 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 302
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
GLE++H + ++R +K ++IL+ +G +S L C FS KKK H ++
Sbjct: 303 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPH----ASVGT 352
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 239
+++PEVL++ + YD +D +S+G +L G PF + T H +
Sbjct: 353 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----------DKHEI 401
Query: 240 DCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC-- 297
D T + D FS S++E L RDV++R L C
Sbjct: 402 DRMTLTMAVELPDS--------------------FSPELRSLLEGLLQRDVNRR-LGCLG 440
Query: 298 ----NLLQHAFFKQTKKCSVML----PELLRPALSLNESNVCEINNELECMFNINDT--- 346
+ + FF+ V L P L+ P +N ++ +I + F+ DT
Sbjct: 441 RGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS-----FDEEDTKGI 495
Query: 347 --FNSSVETLDNVP 358
+S E N P
Sbjct: 496 KLLDSDQELYRNFP 509
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 411 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 302
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
GLE++H + ++R +K ++IL+ +G +S L C FS KKK H ++
Sbjct: 303 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPH----ASVGT 352
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT 573
+++PEVL++ + YD +D +S+G +L G PF + T
Sbjct: 353 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 73/314 (23%)
Query: 61 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 303
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
GLE++H + ++R +K ++IL+ +G +S L C FS K P ++
Sbjct: 304 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGT 353
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 239
+++PEVL++ + YD +D +S+G +L G PF + T H +
Sbjct: 354 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----------DKHEI 402
Query: 240 DCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC-- 297
D T + D FS S++E L RDV++R L C
Sbjct: 403 DRMTLTMAVELPDS--------------------FSPELRSLLEGLLQRDVNRR-LGCLG 441
Query: 298 ----NLLQHAFFKQTKKCSVML----PELLRPALSLNESNVCEINNELECMFNINDT--- 346
+ + FF+ V L P L+ P +N ++ +I + F+ DT
Sbjct: 442 RGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS-----FDEEDTKGI 496
Query: 347 --FNSSVETLDNVP 358
+S E N P
Sbjct: 497 KLLDSDQELYRNFP 510
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 411 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 303
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
GLE++H + ++R +K ++IL+ +G +S L C FS K P ++
Sbjct: 304 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGT 353
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT 573
+++PEVL++ + YD +D +S+G +L G PF + T
Sbjct: 354 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 127/314 (40%), Gaps = 73/314 (23%)
Query: 61 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 303
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
GLE++H + ++R +K ++IL+ +G +S L C FS K P ++
Sbjct: 304 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGT 353
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 239
+++PEVL++ + YD +D +S+G +L G PF + T H +
Sbjct: 354 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----------DKHEI 402
Query: 240 DCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC-- 297
D T + D FS S++E L RDV++R L C
Sbjct: 403 DRMTLTMAVELPDS--------------------FSPELRSLLEGLLQRDVNRR-LGCLG 441
Query: 298 ----NLLQHAFFKQTKKCSVML----PELLRPALSLNESNVCEINNELECMFNINDT--- 346
+ + FF+ V L P L+ P +N ++ +I + F+ DT
Sbjct: 442 RGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS-----FDEEDTKGI 496
Query: 347 --FNSSVETLDNVP 358
+S E N P
Sbjct: 497 KLLDSDQELYRNFP 510
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 411 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 303
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
GLE++H + ++R +K ++IL+ +G +S L C FS K P ++
Sbjct: 304 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------PHASVGT 353
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT 573
+++PEVL++ + YD +D +S+G +L G PF + T
Sbjct: 354 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 228
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 306 KQTKK 310
+ K
Sbjct: 287 QDVTK 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 129/314 (41%), Gaps = 73/314 (23%)
Query: 61 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 303
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
GLE++H + ++R +K ++IL+ +G +S L C FS KKK H ++
Sbjct: 304 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPH----ASVGT 353
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 239
+++PEVL++ + YD +D +S+G +L G PF + T H +
Sbjct: 354 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKTK----------DKHEI 402
Query: 240 DCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC-- 297
D T + D FS S++E L RDV++R L C
Sbjct: 403 DRMTLTMAVELPDS--------------------FSPELRSLLEGLLQRDVNRR-LGCLG 441
Query: 298 ----NLLQHAFFKQTKKCSVML----PELLRPALSLNESNVCEINNELECMFNINDT--- 346
+ + FF+ V L P L+ P +N ++ +I + F+ DT
Sbjct: 442 RGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGS-----FDEEDTKGI 496
Query: 347 --FNSSVETLDNVP 358
+S E N P
Sbjct: 497 KLLDSDQELYRNFP 510
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 411 IVCMRHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
IVCM + H P+ + +I ++ DLH G S D+ F E+++
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-----RFYAAEIIL----- 303
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
GLE++H + ++R +K ++IL+ +G +S L C FS KKK H ++
Sbjct: 304 ----GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPH----ASVGT 353
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT 573
+++PEVL++ + YD +D +S+G +L G PF + T
Sbjct: 354 HGYMAPEVLQKGV-AYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 45/292 (15%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT------DLH 86
K + + +A+KK + ++ K + E++ ++H++H N+I + F A+ D +
Sbjct: 46 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 146
LV P M + ++ F+ E I +++ +L GL+YIH G +HR +K ++ ++
Sbjct: 106 LVMPFMQ-TDLQKIMGLKFS----EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160
Query: 147 HN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ K GL T V + + L+W+ Y++ DI+SV
Sbjct: 161 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH----------YNQTVDIWSV 210
Query: 205 GISCCELANGTVPF--AETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYIS 262
G E+ G F + L I K+ G T +V Q ++ A SYI
Sbjct: 211 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP------GTEFV---QKLNDKAAKSYI- 260
Query: 263 EQQTQVLTSRK-FSDSF-------HSIVELCLSRDVDKRPLACNLLQHAFFK 306
Q+ T RK F+ F ++E L DVDKR A L H FF+
Sbjct: 261 --QSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT------DLH 436
K + + +A+KK + ++ K + E++ ++H++H N+I + F A+ D +
Sbjct: 46 KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 496
LV P M + ++ F+ E I +++ +L GL+YIH G +HR +K ++ ++
Sbjct: 106 LVMPFMQ-TDLQKIMGLKFS----EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160
Query: 497 HN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
+ K GL T V + + L+W+ Y++ DI+SV
Sbjct: 161 EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH----------YNQTVDIWSV 210
Query: 555 GISCCELANGTVPF 568
G E+ G F
Sbjct: 211 GCIMAEMLTGKTLF 224
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 228
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 306 KQTKK 310
+ K
Sbjct: 287 QDVTK 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 20/306 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L
Sbjct: 4 ENFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ + L+LV + K ++A G+P +I L +L GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEV 187
H +HR +K ++LI+ G L+ F P + H L + +PE+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEI 175
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTY 244
L Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 L-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVW 229
Query: 245 YVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAF 304
T D + + + + ++V+ + S++ L D +KR A L H F
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 305 FKQTKK 310
F+ K
Sbjct: 288 FQDVTK 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L
Sbjct: 4 ENFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ + L+LV + K ++A G+P +I L +L GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEV 537
H +HR +K ++LI+ G L+ F P + H L + +PE+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEI 175
Query: 538 LEQNLDGYDERSDIYSVGISCCELAN 563
L Y DI+S+G E+
Sbjct: 176 L-LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 176
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 230
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 306 KQTKK 310
+ K
Sbjct: 289 QDVTK 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 176
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 20/306 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L
Sbjct: 2 ENFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ + L+LV + K ++A G+P +I L +L GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEV 187
H +HR +K ++LI+ G L+ F P + H L + +PE+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEI 173
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTY 244
L Y DI+S+G E+ F +E + L TP D +
Sbjct: 174 L-LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVW 227
Query: 245 YVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAF 304
T D + + + + ++V+ + S++ L D +KR A L H F
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 305 FKQTKK 310
F+ K
Sbjct: 286 FQDVTK 291
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L
Sbjct: 2 ENFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ + L+LV + K ++A G+P +I L +L GL +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEV 537
H +HR +K ++LI+ G L+ F P + H L + +PE+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEI 173
Query: 538 LEQNLDGYDERSDIYSVGISCCELAN 563
L Y DI+S+G E+
Sbjct: 174 L-LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 230
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 306 KQTKK 310
+ K
Sbjct: 289 QDVTK 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 232
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 306 KQTKK 310
+ K
Sbjct: 291 QDVTK 295
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 231
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 306 KQTKK 310
+ K
Sbjct: 290 QDVTK 294
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 8 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 179
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 180 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 233
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 234 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 306 KQTKK 310
+ K
Sbjct: 292 QDVTK 296
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 8 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 179
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 180 -LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 232
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 306 KQTKK 310
+ K
Sbjct: 291 QDVTK 295
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 231
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 306 KQTKK 310
+ K
Sbjct: 290 QDVTK 294
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 231
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 306 KQTKK 310
+ K
Sbjct: 290 QDVTK 294
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 6 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 177
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 178 -LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 174
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 228
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 306 KQTKK 310
+ K
Sbjct: 287 QDVTK 291
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 174
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 230
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 306 KQTKK 310
+ K
Sbjct: 289 QDVTK 293
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 5 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 176
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 177 -LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y++ +G N L + K +N+L+AVK ++K EI+ R LRH
Sbjct: 20 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIAANVK---REIINHRSLRH 74
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 128
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 187
H HR +K + L+ + L +C F +K V H P ST +++PEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 188 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y++ +G N L + K +N+L+AVK ++K EI+ R LRH
Sbjct: 20 RYELVKDIGS--GNFGVARLMRDKQSNELVAVKYIERGEKIAANVK---REIINHRSLRH 74
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYI 478
PNI+ + L T L +V M + S +L N G E Q +++G+ Y
Sbjct: 75 PNIVRFKEVILTPTHLAIV---MEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYC 131
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV-HLFPPSTAYNLNWLSPEV 537
H HR +K + L+ + L +C F +K V H P ST +++PEV
Sbjct: 132 HAMQVCHRDLKLENTLLDGSPAPRLK----ICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 538 -LEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
L++ DG + +D++S G++ + G PF +
Sbjct: 188 LLKKEYDG--KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + AH + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 99 PYGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 212
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 213 LFTYIEKSKSPPAEFM 228
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + AH + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 99 PYGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 212
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 213 LFTYIEKSKSPPAEFM 228
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 232
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 306 KQTKK 310
+ K
Sbjct: 291 QDVTK 295
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 97
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ G
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 95
Query: 98 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
L + F + +L+ I + G++Y+H K IHR +K+++I + H G
Sbjct: 96 HHLHASETKFEMKKLI--DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDF 152
Query: 158 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 216
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G +
Sbjct: 153 GLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
Query: 217 PFAETPTTLMLIEKLAGAT 235
P++ +IE + +
Sbjct: 212 PYSNINNRDQIIEMVGRGS 230
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 447
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ G
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 95
Query: 448 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
L + F + +L+ I + G++Y+H K IHR +K+++I + H G
Sbjct: 96 HHLHASETKFEMKKLI--DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDF 152
Query: 508 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 566
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G +
Sbjct: 153 GLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
Query: 567 PFAETPTTLMLIEKLAGAT 585
P++ +IE + +
Sbjct: 212 PYSNINNRDQIIEMVGRGS 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 139/339 (41%), Gaps = 28/339 (8%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
ME D+ +++ S LG N V+ HK + ++A K +L+ + + E
Sbjct: 1 MELKDD---DFEKISELGA--GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRE 54
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+ + P I+ + +F ++ + M GS ++ +PE ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 112
Query: 121 VLNGLEYIHGK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
V+ GL Y+ K +HR VK S+IL++ G+ L C F + + + S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGT 166
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT---LMLIEKLAGATP 236
+++SPE L+ Y +SDI+S+G+S E+A G P LM ++ G
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 224
Query: 237 HLLD--------CTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSR 288
++Y +D+ YI + L S FS F V CL +
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 284
Query: 289 DVDKRPLACNLLQHAFFKQTKKCSVMLPELLRPALSLNE 327
+ +R L+ HAF K++ V L + LN+
Sbjct: 285 NPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 134 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 185
Query: 551 IYSVGISCCELANGTVPF 568
I+S+G+S E+A G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 139/339 (41%), Gaps = 28/339 (8%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
ME D+ +++ S LG N V+ HK + ++A K +L+ + + E
Sbjct: 1 MELKDD---DFEKISELGA--GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRE 54
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+ + P I+ + +F ++ + M GS ++ +PE ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 112
Query: 121 VLNGLEYIHGK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
V+ GL Y+ K +HR VK S+IL++ G+ L C F + + + S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGT 166
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT---LMLIEKLAGATP 236
+++SPE L+ Y +SDI+S+G+S E+A G P LM ++ G
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 224
Query: 237 HLLD--------CTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSR 288
++Y +D+ YI + L S FS F V CL +
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 284
Query: 289 DVDKRPLACNLLQHAFFKQTKKCSVMLPELLRPALSLNE 327
+ +R L+ HAF K++ V L + LN+
Sbjct: 285 NPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 134 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 185
Query: 551 IYSVGISCCELANGTVPF 568
I+S+G+S E+A G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 97
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ G
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 107
Query: 98 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
L + F + +L+ I + G++Y+H K IHR +K+++I + H G
Sbjct: 108 HHLHASETKFEMKKLI--DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDF 164
Query: 158 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 216
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G +
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 217 PFAETPTTLMLIE 229
P++ +IE
Sbjct: 224 PYSNINNRDQIIE 236
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 447
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ G
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 107
Query: 448 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
L + F + +L+ I + G++Y+H K IHR +K+++I + H G
Sbjct: 108 HHLHASETKFEMKKLI--DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNTVKIGDF 164
Query: 508 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 566
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G +
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 567 PFAETPTTLMLIE 579
P++ +IE
Sbjct: 224 PYSNINNRDQIIE 236
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 125/301 (41%), Gaps = 20/301 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 K 306
+
Sbjct: 288 Q 288
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 10/210 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y DI+S+G E+ F
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 38/328 (11%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
ME D+ +++ S LG N V+ HK + ++A K +L+ + + E
Sbjct: 1 MELKDD---DFEKISELGA--GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRE 54
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+ + P I+ + +F ++ + M GS ++ +PE ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 112
Query: 121 VLNGLEYIHGK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
V+ GL Y+ K +HR VK S+IL++ G+ L C F + + + S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGT 166
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 239
+++SPE L+ Y +SDI+S+G+S E+A G P P + A LL
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPI--PPPDAKEDSRPPMAIFELL 222
Query: 240 DCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNL 299
D YI + L S FS F V CL ++ +R L
Sbjct: 223 D-------------------YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
Query: 300 LQHAFFKQTKKCSVMLPELLRPALSLNE 327
+ HAF K++ V L + LN+
Sbjct: 264 MVHAFIKRSDAEEVDFAGWLCSTIGLNQ 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 134 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 185
Query: 551 IYSVGISCCELANGTVPF 568
I+S+G+S E+A G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 28/338 (8%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
ME D+ +++ S LG N V+ HK + ++A K +L+ + + E
Sbjct: 1 MELKDD---DFEKISELGA--GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRE 54
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+ + P I+ + +F ++ + M GS ++ +PE ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 112
Query: 121 VLNGLEYIHGK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
V+ GL Y+ K +HR VK S+IL++ G+ L C F + + + S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGT 166
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT---LMLIEKLAGATP 236
+++SPE L+ Y +SDI+S+G+S E+A G P LM ++ G
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 224
Query: 237 HLLD--------CTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSR 288
++Y +D+ YI + L S FS F V CL +
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 284
Query: 289 DVDKRPLACNLLQHAFFKQTKKCSVMLPELLRPALSLN 326
+ +R L+ HAF K++ V L + LN
Sbjct: 285 NPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLN 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 134 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 185
Query: 551 IYSVGISCCELANGTVPF 568
I+S+G+S E+A G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 28/338 (8%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
ME D+ +++ S LG N V+ HK + ++A K +L+ + + E
Sbjct: 1 MELKDD---DFEKISELGA--GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRE 54
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+ + P I+ + +F ++ + M GS ++ +PE ++ +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 112
Query: 121 VLNGLEYIHGK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
V+ GL Y+ K +HR VK S+IL++ G+ L C F + + + S
Sbjct: 113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGT 166
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT---LMLIEKLAGATP 236
+++SPE L+ Y +SDI+S+G+S E+A G P LM ++ G
Sbjct: 167 RSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 224
Query: 237 HLLD--------CTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSR 288
++Y +D+ YI + L S FS F V CL +
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 284
Query: 289 DVDKRPLACNLLQHAFFKQTKKCSVMLPELLRPALSLN 326
+ +R L+ HAF K++ V L + LN
Sbjct: 285 NPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLN 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 134 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 185
Query: 551 IYSVGISCCELANGTVPF 568
I+S+G+S E+A G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 232
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 306 KQTKK 310
+ K
Sbjct: 291 QDVTK 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 7 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-----EVVTLWYRAPEIL 178
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 41 VKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDL 100
+K+ N+ RM+ ++ + E+ + +++HPNI+ Y SF + L++V G
Sbjct: 54 IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113
Query: 101 INAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMC 160
INA E I + L+++H + +HR +K+ +I ++ +G L
Sbjct: 114 INAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR 173
Query: 161 PFSPTKKKVHLFPP--STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ T V L T Y +LSPE+ E Y+ +SDI+++G EL F
Sbjct: 174 VLNST---VELARACIGTPY---YLSPEICENK--PYNNKSDIWALGCVLYELCTLKHAF 225
Query: 219 AETPTTLMLIEKLAGATP 236
++++ ++G+ P
Sbjct: 226 EAGSMKNLVLKIISGSFP 243
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 391 VKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDL 450
+K+ N+ RM+ ++ + E+ + +++HPNI+ Y SF + L++V G
Sbjct: 54 IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113
Query: 451 INAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMC 510
INA E I + L+++H + +HR +K+ +I ++ +G L
Sbjct: 114 INAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR 173
Query: 511 PFSPTKKKVHLFPP--STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ T V L T Y +LSPE+ E Y+ +SDI+++G EL F
Sbjct: 174 VLNST---VELARACIGTPY---YLSPEICENK--PYNNKSDIWALGCVLYELCTLKHAF 225
Query: 569 AETPTTLMLIEKLAGATP 586
++++ ++G+ P
Sbjct: 226 EAGSMKNLVLKIISGSFP 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 37 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 95 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 153
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 208
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 209 LFTYIEKSKSPPAEFM 224
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 37 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 95 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 153
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 208
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 209 LFTYIEKSKSPPAEFM 224
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 36 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 94 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 152
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 207
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 208 LFTYIEKSKSPPAEFM 223
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 36 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 94 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 152
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 207
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 208 LFTYIEKSKSPPAEFM 223
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+ K LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 229
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 306 KQTKK 310
+ K
Sbjct: 288 QDVTK 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+ K LD T+ + EI ++ L H
Sbjct: 4 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 175
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 176 -LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+ K LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 228
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 306 KQTKK 310
+ K
Sbjct: 287 QDVTK 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+ K LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 45 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 103 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 161
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 216
Query: 211 LANGTVPFAETPTTLMLI 228
L P M +
Sbjct: 217 LFTYIEKSKSPPAEFMRM 234
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 45 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 103 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 161
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 216
Query: 561 LANGTVPFAETPTTLMLI 578
L P M +
Sbjct: 217 LFTYIEKSKSPPAEFMRM 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 20/305 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 188
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHLLDCTTYY 245
Y DI+S+G E+ F +E + L TP D +
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTP---DEVVWP 228
Query: 246 VDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
T D + + + + ++V+ + S++ L D +KR A L H FF
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPP--LDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 306 KQTKK 310
+ K
Sbjct: 287 QDVTK 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
N++ +G+ VY +++K+T +++A+KK LD T+ + EI ++ L H
Sbjct: 3 NFQKVEKIGE--GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ + L+LV + K ++A G+P +I L +L GL + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVL 538
+HR +K ++LI+ G L+ F P + H L + +PE+L
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-----EVVTLWYRAPEIL 174
Query: 539 EQNLDGYDERSDIYSVGISCCELAN 563
Y DI+S+G E+
Sbjct: 175 -LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 99 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 212
Query: 211 LANGTVPFAETPTTLMLI 228
L P M +
Sbjct: 213 LFTYIEKSKSPPAEFMRM 230
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 99 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 212
Query: 561 LANGTVPFAETPTTLMLI 578
L P M +
Sbjct: 213 LFTYIEKSKSPPAEFMRM 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 96 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 209
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 210 LFTYIEKSKSPPAEFM 225
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 96 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 209
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 210 LFTYIEKSKSPPAEFM 225
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + A L +V+ S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTAPQLAIVTQWCEGSSLY 91
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 92 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 146
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + ++ W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 147 DFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 215 TVPFA 219
+P++
Sbjct: 206 QLPYS 210
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + A L +V+ S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTAPQLAIVTQWCEGSSLY 91
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 92 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 146
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + ++ W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 147 DFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 565 TVPFA 569
+P++
Sbjct: 206 QLPYS 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 42 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 100 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 158
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 213
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 214 LFTYIEKSKSPPAEFM 229
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 42 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 100 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 158
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 213
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 214 LFTYIEKSKSPPAEFM 229
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 96 PYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 209
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 210 LFTYIEKSKSPPAEFM 225
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 96 PYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 209
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 210 LFTYIEKSKSPPAEFM 225
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 69 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 127 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 185
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 240
Query: 211 L 211
L
Sbjct: 241 L 241
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 69 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 127 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 185
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 240
Query: 561 L 561
L
Sbjct: 241 L 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 44 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 102 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 160
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 215
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 216 LFTYIEKSKSPPAEFM 231
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 44 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 102 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 160
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 215
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 216 LFTYIEKSKSPPAEFM 231
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 43 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 101 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 159
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 214
Query: 211 LANGTVPFAETPTTLMLI 228
L P M +
Sbjct: 215 LFTYIEKSKSPPAEFMRM 232
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 43 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 101 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 159
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 214
Query: 561 LANGTVPFAETPTTLMLI 578
L P M +
Sbjct: 215 LFTYIEKSKSPPAEFMRM 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 56 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 114 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 227
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 228 LFTYIEKSKSPPAEFM 243
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 56 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 114 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 227
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 228 LFTYIEKSKSPPAEFM 243
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 25/330 (7%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+++ S LG N V+ HK + ++A K +L+ + + E+ +
Sbjct: 69 DFEKISELGA--GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNS 125
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
P I+ + +F ++ + M GS ++ +PE ++ + V+ GL Y+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 183
Query: 130 GK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
K +HR VK S+IL++ G+ L C F + + + S +++SPE L
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERL 237
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT---LMLIEKLAGATPHLLD----- 240
+ Y +SDI+S+G+S E+A G P LM ++ G
Sbjct: 238 QGT--HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 295
Query: 241 ---CTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC 297
++Y +D+ YI + L S FS F V CL ++ +R
Sbjct: 296 GRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLK 355
Query: 298 NLLQHAFFKQTKKCSVMLPELLRPALSLNE 327
L+ HAF K++ V L + LN+
Sbjct: 356 QLMVHAFIKRSDAEEVDFAGWLCSTIGLNQ 385
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+++ S LG N V+ HK + ++A K +L+ + + E+ +
Sbjct: 69 DFEKISELGA--GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNS 125
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
P I+ + +F ++ + M GS ++ +PE ++ + V+ GL Y+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLR 183
Query: 480 GK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
K +HR VK S+IL++ G+ L C F + + + S +++SPE L
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERL 237
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ Y +SDI+S+G+S E+A G P
Sbjct: 238 QGT--HYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 27 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH 86
V L + KVT+ A+K ++ L E+ ++ L HPNI+ F D + +
Sbjct: 53 VLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY 112
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 146
LV G D I F E+ I++ VL+G+ Y+H +HR +K ++L+
Sbjct: 113 LVMECYKGGELFDEIIHRMKFN--EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLE 170
Query: 147 HNGKACLSGL---RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
K L + F KK TAY +++PEVL + YDE+ D++S
Sbjct: 171 SKEKDALIKIVDFGLSAVFENQKKMKERL--GTAY---YIAPEVLRKK---YDEKCDVWS 222
Query: 204 VGISCCELANGTVPFA 219
+G+ L G PF
Sbjct: 223 IGVILFILLAGYPPFG 238
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 377 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH 436
V L + KVT+ A+K ++ L E+ ++ L HPNI+ F D + +
Sbjct: 53 VLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYY 112
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 496
LV G D I F E+ I++ VL+G+ Y+H +HR +K ++L+
Sbjct: 113 LVMECYKGGELFDEIIHRMKFN--EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLE 170
Query: 497 HNGKACLSGL---RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
K L + F KK TAY +++PEVL + YDE+ D++S
Sbjct: 171 SKEKDALIKIVDFGLSAVFENQKKMKERL--GTAY---YIAPEVLRKK---YDEKCDVWS 222
Query: 554 VGISCCELANGTVPFA 569
+G+ L G PF
Sbjct: 223 IGVILFILLAGYPPFG 238
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 56 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 114 PYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 227
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 228 LFTYIEKSKSPPAEFM 243
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 56 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 114 PYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 227
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 228 LFTYIEKSKSPPAEFM 243
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 97
+AVK + T E ++ +E+ +R RH NI+ ++ ++ +L +V+ G
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKDNLAIVTQWCEGSSLY 119
Query: 98 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
K L F + +L+ I + G++Y+H K IHR +K+++I + H G G
Sbjct: 120 KHLHVQETKFQMFQLI--DIARQTAQGMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDF 176
Query: 158 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 216
+ T L W++PEV+ Q+ + + +SD+YS GI EL G +
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVL-WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 217 PFA 219
P++
Sbjct: 236 PYS 238
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL-MGFGSC 447
+AVK + T E ++ +E+ +R RH NI+ ++ ++ +L +V+ G
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMTKDNLAIVTQWCEGSSLY 119
Query: 448 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
K L F + +L+ I + G++Y+H K IHR +K+++I + H G G
Sbjct: 120 KHLHVQETKFQMFQLI--DIARQTAQGMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDF 176
Query: 508 YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTV 566
+ T L W++PEV+ Q+ + + +SD+YS GI EL G +
Sbjct: 177 GLATVKSRWSGSQQVEQPTGSVL-WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 567 PFA 569
P++
Sbjct: 236 PYS 238
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 39 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 97 PYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVK 155
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 210
Query: 211 LANGTVPFAETPTTLMLI 228
L P M +
Sbjct: 211 LFTYIEKSKSPPAEFMRM 228
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 39 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 97 PYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVK 155
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 210
Query: 561 LANGTVPFAETPTTLMLI 578
L P M +
Sbjct: 211 LFTYIEKSKSPPAEFMRM 228
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 38/301 (12%)
Query: 4 LDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--LDRMTDEDLKSLHH 59
L NV +N+ + S+ G + K V N +AVKK +D T+E +
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPEL---VICH 116
EI M +H N++ + D DL LV M GS D ++ G P L + C
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCK 137
Query: 117 ILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFP 173
I Q NG+ ++H IHR +K+++IL+ A +S GL R F+ T +
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIV- 196
Query: 174 PSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAG 233
+TAY ++PE L + +SDIYS G+ E+ G +P + L+ +
Sbjct: 197 GTTAY----MAPEALRGEI---TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 248
Query: 234 ATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKR 293
Y+D +D + + ++ +S+ CL +KR
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSV-----------------EAMYSVASQCLHEKKNKR 291
Query: 294 P 294
P
Sbjct: 292 P 292
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 354 LDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--LDRMTDEDLKSLHH 409
L NV +N+ + S+ G + K V N +AVKK +D T+E +
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPEL---VICH 466
EI M +H N++ + D DL LV M GS D ++ G P L + C
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCK 137
Query: 467 ILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFP 523
I Q NG+ ++H IHR +K+++IL+ A +S GL R F+ T +
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIV- 196
Query: 524 PSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+TAY ++PE L + +SDIYS G+ E+ G
Sbjct: 197 GTTAY----MAPEALRGEI---TPKSDIYSFGVVLLEIITG 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS ++ + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 99 PYGSLREYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 212
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 213 LFTYIEKSKSPPAEFM 228
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 41 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS ++ + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 99 PYGSLREYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 212
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 213 LFTYIEKSKSPPAEFM 228
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN---LDRMTDEDLKSLHHEIVCMRHL 67
+ + ILGQ ++V+ +HK T L A+K FN R D ++ E ++ L
Sbjct: 11 WLLSDILGQ--GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR----EFEVLKKL 64
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGF---GSCKDLINAHFN-FGLPELVICHILQDVLN 123
H NI+ + + T H V +M F GS ++ N +GLPE +L+DV+
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVL-IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 124 GLEYIHGKGFIHRAVKASHIL--ISHNGKAC--LSGLRYMCPFSPTKKKVHLFPPSTAYN 179
G+ ++ G +HR +K +I+ I +G++ L+ ++ V L+
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE---- 179
Query: 180 LNWLSPEVLEQNL------DGYDERSDIYSVGISCCELANGTVPF 218
+L P++ E+ + Y D++S+G++ A G++PF
Sbjct: 180 -EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN---LDRMTDEDLKSLHHEIVCMRHL 417
+ + ILGQ ++V+ +HK T L A+K FN R D ++ E ++ L
Sbjct: 11 WLLSDILGQ--GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR----EFEVLKKL 64
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGF---GSCKDLINAHFN-FGLPELVICHILQDVLN 473
H NI+ + + T H V +M F GS ++ N +GLPE +L+DV+
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVL-IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 474 GLEYIHGKGFIHRAVKASHIL--ISHNGKAC--LSGLRYMCPFSPTKKKVHLFPPSTAYN 529
G+ ++ G +HR +K +I+ I +G++ L+ ++ V L+
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE---- 179
Query: 530 LNWLSPEVLEQNL------DGYDERSDIYSVGISCCELANGTVPF 568
+L P++ E+ + Y D++S+G++ A G++PF
Sbjct: 180 -EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 18/237 (7%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKK-FNLDRMTDEDLKSLHHEIVCMR 65
+ YKI LG +S+VYL++ + N +A+K F R +E LK E+
Sbjct: 9 INERYKIVDKLGG--GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 66 HLRHPNIICYISSFLDATD--LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
L H NI+ I +D D +LV + + + I +H + + + +L+
Sbjct: 67 QLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI--NFTNQILD 122
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLN 181
G+++ H +HR +K +ILI N + S T + H+ +
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG-----TVQ 177
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHL 238
+ SPE + + DE +DIYS+GI E+ G PF + I+ + + P++
Sbjct: 178 YFSPE--QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNV 232
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 18/237 (7%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKK-FNLDRMTDEDLKSLHHEIVCMR 415
+ YKI LG +S+VYL++ + N +A+K F R +E LK E+
Sbjct: 9 INERYKIVDKLGG--GGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 416 HLRHPNIICYISSFLDATD--LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
L H NI+ I +D D +LV + + + I +H + + + +L+
Sbjct: 67 QLSHQNIVSMID--VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI--NFTNQILD 122
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK--KKVHLFPPSTAYNLN 531
G+++ H +HR +K +ILI N + S T + H+ +
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG-----TVQ 177
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHL 588
+ SPE + + DE +DIYS+GI E+ G PF + I+ + + P++
Sbjct: 178 YFSPE--QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNV 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 38/301 (12%)
Query: 4 LDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--LDRMTDEDLKSLHH 59
L NV +N+ + S+ G + K V N +AVKK +D T+E +
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPEL---VICH 116
EI M +H N++ + D DL LV M GS D ++ G P L + C
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCK 137
Query: 117 ILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFP 173
I Q NG+ ++H IHR +K+++IL+ A +S GL R F+ T +
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIV- 196
Query: 174 PSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAG 233
+TAY ++PE L + +SDIYS G+ E+ G +P + L+ +
Sbjct: 197 GTTAY----MAPEALRGEI---TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 248
Query: 234 ATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKR 293
Y+D +D + + ++ +S+ CL +KR
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSV-----------------EAMYSVASQCLHEKKNKR 291
Query: 294 P 294
P
Sbjct: 292 P 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 20/221 (9%)
Query: 354 LDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--LDRMTDEDLKSLHH 409
L NV +N+ + S+ G + K V N +AVKK +D T+E +
Sbjct: 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPEL---VICH 466
EI M +H N++ + D DL LV M GS D ++ G P L + C
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCK 137
Query: 467 ILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFP 523
I Q NG+ ++H IHR +K+++IL+ A +S GL R F+ T +
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIV- 196
Query: 524 PSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+TAY ++PE L + +SDIYS G+ E+ G
Sbjct: 197 GTTAY----MAPEALRGEI---TPKSDIYSFGVVLLEIITG 230
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIK 190
Query: 199 SDIYSVGISCCELAN-GTVPF 218
SD+++ G+ E+A G P+
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY 211
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIK 190
Query: 549 SDIYSVGISCCELAN-GTVPF 568
SD+++ G+ E+A G P+
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY 211
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 24/245 (9%)
Query: 341 FNINDTFNSSVETLDNVPSNYKICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRM 399
I+D +E + + + +LG+ F ++ L + + +AVK D +
Sbjct: 5 LGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII 64
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDL------HLVSPLMGFGSCKDLINA 453
D++ E CM+ HP++ + L + ++ P M G + A
Sbjct: 65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA 124
Query: 454 HF----NFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYM 509
F LP + + D+ G+EY+ + FIHR + A + +++ + C++
Sbjct: 125 SRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD---- 180
Query: 510 CPFSPTKK----KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANG 564
F ++K + ++ + WL+ E L NL Y SD+++ G++ E + G
Sbjct: 181 --FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNL--YTVHSDVWAFGVTMWEIMTRG 236
Query: 565 TVPFA 569
P+A
Sbjct: 237 QTPYA 241
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 27/237 (11%)
Query: 2 ETLDNV---PSNYKICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSL 57
E L++V + + +LG+ F ++ L + + +AVK D + D++
Sbjct: 13 EKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEF 72
Query: 58 HHEIVCMRHLRHPNIICYISSFLDATDL------HLVSPLMGFGSCKDLINAHF----NF 107
E CM+ HP++ + L + ++ P M G + A F
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF 132
Query: 108 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK 167
LP + + D+ G+EY+ + FIHR + A + +++ + C++ F ++K
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD------FGLSRK 186
Query: 168 ----KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPFA 219
+ ++ + WL+ E L NL Y SD+++ G++ E + G P+A
Sbjct: 187 IYSGDYYRQGCASKLPVKWLALESLADNL--YTVHSDVWAFGVTMWEIMTRGQTPYA 241
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN---LDRMTDEDLKSLHHEIVCMRHL 67
+ + ILGQ ++V+ +HK T L A+K FN R D ++ E ++ L
Sbjct: 11 WLLSDILGQ--GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR----EFEVLKKL 64
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGF---GSCKDLINAHFN-FGLPELVICHILQDVLN 123
H NI+ + + T H V +M F GS ++ N +GLPE +L+DV+
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVL-IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 124 GLEYIHGKGFIHRAVKASHIL--ISHNGKAC--LSGLRYMCPFSPTKKKVHLFPPSTAYN 179
G+ ++ G +HR +K +I+ I +G++ L+ ++ V L+
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTE---- 179
Query: 180 LNWLSPEVLEQNL------DGYDERSDIYSVGISCCELANGTVPF 218
+L P++ E+ + Y D++S+G++ A G++PF
Sbjct: 180 -EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN---LDRMTDEDLKSLHHEIVCMRHL 417
+ + ILGQ ++V+ +HK T L A+K FN R D ++ E ++ L
Sbjct: 11 WLLSDILGQ--GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR----EFEVLKKL 64
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGF---GSCKDLINAHFN-FGLPELVICHILQDVLN 473
H NI+ + + T H V +M F GS ++ N +GLPE +L+DV+
Sbjct: 65 NHKNIVKLFAIEEETTTRHKVL-IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123
Query: 474 GLEYIHGKGFIHRAVKASHIL--ISHNGKAC--LSGLRYMCPFSPTKKKVHLFPPSTAYN 529
G+ ++ G +HR +K +I+ I +G++ L+ ++ V L+
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTE---- 179
Query: 530 LNWLSPEVLEQNL------DGYDERSDIYSVGISCCELANGTVPF 568
+L P++ E+ + Y D++S+G++ A G++PF
Sbjct: 180 -EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 96
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 97 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 151
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 152 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 215 TVPFA 219
+P++
Sbjct: 211 QLPYS 215
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 96
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 97 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 151
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 152 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 565 TVPFA 569
+P++
Sbjct: 211 QLPYS 215
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 91
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 92 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 146
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + ++ W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 147 DFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 215 TVPFA 219
+P++
Sbjct: 206 QLPYS 210
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 91
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 92 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 146
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + ++ W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 147 DFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 565 TVPFA 569
+P++
Sbjct: 206 QLPYS 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 118
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 119 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 173
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 174 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 215 TVPFA 219
+P++
Sbjct: 233 QLPYS 237
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 118
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 119 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 173
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 174 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 565 TVPFA 569
+P++
Sbjct: 233 QLPYS 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 37/313 (11%)
Query: 27 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDL 85
V+ +++ T Q++A+KKF L+ D +K + EI ++ L+HPN++ + F L
Sbjct: 19 VFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRL 77
Query: 86 HLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 145
HLV +L + G+PE ++ I L + + H IHR VK +ILI
Sbjct: 78 HLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135
Query: 146 SHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYN----LNWL-SPEVLEQNLDGYDER 198
+ + K C G + L PS Y+ W SPE+L + Y
Sbjct: 136 TKHSVIKLCDFGFARL-----------LTGPSDYYDDEVATRWYRSPELLVGDTQ-YGPP 183
Query: 199 SDIYSVGISCCELANGT--VPFAETPTTLMLIEKLAG----ATPHLLDCTTYYVDTGQDD 252
D++++G EL +G P L LI K G + Y+ D
Sbjct: 184 VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPD 243
Query: 253 GEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCS 312
E + + L S +++ CL D +R LL H +F+ ++
Sbjct: 244 PE--------DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE 295
Query: 313 VMLPELLRPALSL 325
+ E +PA +L
Sbjct: 296 DLAKEHDKPAENL 308
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 377 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDL 435
V+ +++ T Q++A+KKF L+ D +K + EI ++ L+HPN++ + F L
Sbjct: 19 VFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRL 77
Query: 436 HLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 495
HLV +L + G+PE ++ I L + + H IHR VK +ILI
Sbjct: 78 HLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135
Query: 496 SHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYN----LNWL-SPEVLEQNLDGYDER 548
+ + K C G + L PS Y+ W SPE+L + Y
Sbjct: 136 TKHSVIKLCDFGFARL-----------LTGPSDYYDDEVATRWYRSPELLVGDTQ-YGPP 183
Query: 549 SDIYSVGISCCELANGT--VPFAETPTTLMLIEKLAG 583
D++++G EL +G P L LI K G
Sbjct: 184 VDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 93
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 94 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 148
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + ++ W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 149 DFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 215 TVPFA 219
+P++
Sbjct: 208 QLPYS 212
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 93
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 94 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 148
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + ++ W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 149 DFGLATVKSRWSGSHQFEQLSG-SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 565 TVPFA 569
+P++
Sbjct: 208 QLPYS 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 96 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 209
Query: 211 LANGTVPFAETPTTLM 226
L P M
Sbjct: 210 LFTYIEKSKSPPAEFM 225
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVKK L T+E L+ EI ++ L+H NI+ Y A +L L+ +
Sbjct: 38 TGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
+GS +D + H + + + + G+EY+ K +IHR + +IL+ + +
Sbjct: 96 PYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL + P KV S + W +PE L ++ + SD++S G+ E
Sbjct: 155 IGDFGLTKVLPQDKEFFKVKEPGESPIF---WYAPESLTES--KFSVASDVWSFGVVLYE 209
Query: 561 LANGTVPFAETPTTLM 576
L P M
Sbjct: 210 LFTYIEKSKSPPAEFM 225
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 119
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 120 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 174
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 175 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 215 TVPFA 219
+P++
Sbjct: 234 QLPYS 238
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 119
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 120 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 174
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 175 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 565 TVPFA 569
+P++
Sbjct: 234 QLPYS 238
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 96
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 97 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 151
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 152 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 215 TVPFA 219
+P++
Sbjct: 211 QLPYS 215
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 96
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 97 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 151
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 152 DFGLATVKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 565 TVPFA 569
+P++
Sbjct: 211 QLPYS 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 43/307 (14%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 78
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 140
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 79 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 136
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 200
S+IL++ G+ L C F + + + +++SPE L+ Y +SD
Sbjct: 137 SNILVNSRGEIKL------CDFGVSGQLIDEMANEFVGTRSYMSPERLQGT--HYSVQSD 188
Query: 201 IYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
I+S+G+S E+A G P P + LLD Y
Sbjct: 189 IWSMGLSLVEMAVGRYP--RPPMAIF----------ELLD-------------------Y 217
Query: 261 ISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKKCSVMLPELLR 320
I + L S FS F V CL ++ +R L+ HAF K++ V L
Sbjct: 218 IVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLC 277
Query: 321 PALSLNE 327
+ LN+
Sbjct: 278 STIGLNQ 284
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 78
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 79 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 136
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + +++SPE L+ Y +SD
Sbjct: 137 SNILVNSRGEIKL------CDFGVSGQLIDEMANEFVGTRSYMSPERLQGT--HYSVQSD 188
Query: 551 IYSVGISCCELANGTVP 567
I+S+G+S E+A G P
Sbjct: 189 IWSMGLSLVEMAVGRYP 205
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 84
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 85 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + P + + W +PE L N + +SD+
Sbjct: 145 VGENHLVKVADFGLSRLMT------GDTYTAPAGAKFPIKWTAPESLAYN--KFSIKSDV 196
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 197 WAFGVLLWEIATYGMSPY 214
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 84
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 85 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + P + + W +PE L N + +SD+
Sbjct: 145 VGENHLVKVADFGLSRLMT------GDTYTAPAGAKFPIKWTAPESLAYN--KFSIKSDV 196
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 197 WAFGVLLWEIATYGMSPY 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 51 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 109
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 227 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 286
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 287 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 347 KL-------PVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 401 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 459
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 227 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 286
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 287 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 347 KL-------PVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 51 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 109
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 40 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 99
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 100 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 160 KL-------PVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 401 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 459
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 40 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 99
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 100 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 160 KL-------PVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 51 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 109
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 55 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 114
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 115 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 175 KL-------PVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 401 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 459
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 55 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 114
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 115 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 175 KL-------PVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 51 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 109
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 46 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 105
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 106 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 165
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 166 KL-------PVKWTAPEALREA--AFSTKSDVWSFGILLWEIYSFGRVPYPRIP 210
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 401 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGL 459
D ++ E M LRH N++ + ++ L++V+ M GS D + + L
Sbjct: 46 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 105
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
+ DV +EY+ G F+HR + A ++L+S + A +S S T+
Sbjct: 106 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 165
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
L + W +PE L + + +SD++S GI E+ + G VP+ P
Sbjct: 166 KL-------PVKWTAPEALREA--AFSTKSDVWSFGILLWEIYSFGRVPYPRIP 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIK 197
Query: 199 SDIYSVGISCCELAN-GTVPF 218
SD+++ G+ E+A G P+
Sbjct: 198 SDVWAFGVLLWEIATYGMSPY 218
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 146 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIK 197
Query: 549 SDIYSVGISCCELAN-GTVPF 568
SD+++ G+ E+A G P+
Sbjct: 198 SDVWAFGVLLWEIATYGMSPY 218
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + P + + W +PE L N + +SD+
Sbjct: 146 VGENHLVKVADFGLSRLMT------GDTYTAPAGAKFPIKWTAPESLAYN--KFSIKSDV 197
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + P + + W +PE L N + +SD+
Sbjct: 146 VGENHLVKVADFGLSRLMT------GDTYTAPAGAKFPIKWTAPESLAYN--KFSIKSDV 197
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 126/318 (39%), Gaps = 23/318 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 44 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 102
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 140
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 103 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 160
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 200
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 161 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 212
Query: 201 IYSVGISCCELANGTVPFAETPTT---LMLIEKLAGATPHLLDCTTYYVDT----GQDDG 253
I+S+G+S E+A G P LM ++ G G D
Sbjct: 213 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSR 272
Query: 254 EENAC----SYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTK 309
A YI + L S FS F V CL ++ +R L+ HAF K++
Sbjct: 273 PPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332
Query: 310 KCSVMLPELLRPALSLNE 327
V L + LN+
Sbjct: 333 AEEVDFAGWLCSTIGLNQ 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ HK + ++A K +L+ + + E+ + P I+ + +F
Sbjct: 44 GNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 102
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKA 490
++ + M GS ++ +PE ++ + V+ GL Y+ K +HR VK
Sbjct: 103 DGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 160
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
S+IL++ G+ L C F + + + S +++SPE L+ Y +SD
Sbjct: 161 SNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMSPERLQGT--HYSVQSD 212
Query: 551 IYSVGISCCELANGTVPF 568
I+S+G+S E+A G P
Sbjct: 213 IWSMGLSLVEMAVGRYPI 230
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIK 192
Query: 199 SDIYSVGISCCELAN-GTVPF 218
SD+++ G+ E+A G P+
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY 213
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 141 NCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIK 192
Query: 549 SDIYSVGISCCELAN-GTVPF 568
SD+++ G+ E+A G P+
Sbjct: 193 SDVWAFGVLLWEIATYGMSPY 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 176 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 234
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 235 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 292
Query: 152 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 195
CL S +R +C +PT +L+PEVL GY
Sbjct: 293 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 335
Query: 196 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+ D +S+G+ +G PF+E T + L +++
Sbjct: 336 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 374
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 176 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 234
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 235 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 292
Query: 502 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 545
CL S +R +C +PT +L+PEVL GY
Sbjct: 293 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 335
Query: 546 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
+ D +S+G+ +G PF+E T + L +++
Sbjct: 336 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 374
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 111
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 112 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 166
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 167 DFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 215 TVPFA 219
+P++
Sbjct: 226 QLPYS 230
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 111
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 112 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 166
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 167 DFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 565 TVPFA 569
+P++
Sbjct: 226 QLPYS 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 91
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 92 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 146
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 147 DFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 215 TVPFA 219
+P++
Sbjct: 206 QLPYS 210
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 91
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 92 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 146
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 147 DFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 565 TVPFA 569
+P++
Sbjct: 206 QLPYS 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
VY+ K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++V+ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 159
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 160 NCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYNT--FSIK 211
Query: 199 SDIYSVGISCCELAN-GTVPF 218
SD+++ G+ E+A G P+
Sbjct: 212 SDVWAFGVLLWEIATYGMSPY 232
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
VY+ K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++V+ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 159
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 160 NCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYNT--FSIK 211
Query: 549 SDIYSVGISCCELAN-GTVPF 568
SD+++ G+ E+A G P+
Sbjct: 212 SDVWAFGVLLWEIATYGMSPY 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE-DLKSLHHEIVCMRHLRH 69
++I +G+ + V + + T ++ A+K N + + +++++ E+ M+ L H
Sbjct: 17 FEILRAIGK--GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLI--NAHFNFGLPELVICHILQDVLNGLEY 127
P ++ SF D D+ +V L+ G + + N HF +L IC ++ L+Y
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVM----ALDY 130
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 187
+ + IHR +K +IL+ +G ++ + P + ++ + Y ++PE+
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFN-IAAMLPRETQITTMAGTKPY----MAPEM 185
Query: 188 L-EQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ GY D +S+G++ EL G P+
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE-DLKSLHHEIVCMRHLRH 419
++I +G+ + V + + T ++ A+K N + + +++++ E+ M+ L H
Sbjct: 17 FEILRAIGK--GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLI--NAHFNFGLPELVICHILQDVLNGLEY 477
P ++ SF D D+ +V L+ G + + N HF +L IC ++ L+Y
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVM----ALDY 130
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 537
+ + IHR +K +IL+ +G ++ + P + ++ + Y ++PE+
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFN-IAAMLPRETQITTMAGTKPY----MAPEM 185
Query: 538 L-EQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ GY D +S+G++ EL G P+
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 119
Query: 99 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 155
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 120 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 174
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 214
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 175 DFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 215 TVPFA 219
+P++
Sbjct: 234 QLPYS 238
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK N+ T + L++ +E+ +R RH NI+ ++ + L +V+ S
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-GYSTKPQLAIVTQWCEGSSLY 119
Query: 449 ---DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSG 505
+I F + + I + G++Y+H K IHR +K+++I + H G
Sbjct: 120 HHLHIIETKFEM----IKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIG 174
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANG 564
+ H F + L W++PEV+ Q+ + Y +SD+Y+ GI EL G
Sbjct: 175 DFGLATEKSRWSGSHQFEQLSGSIL-WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 565 TVPFA 569
+P++
Sbjct: 234 QLPYS 238
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 162 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 220
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 221 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 278
Query: 152 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 195
CL S +R +C +PT +L+PEVL GY
Sbjct: 279 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 321
Query: 196 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+ D +S+G+ +G PF+E T + L +++
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 162 KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 220
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 221 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 278
Query: 502 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 545
CL S +R +C +PT +L+PEVL GY
Sbjct: 279 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 321
Query: 546 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
+ D +S+G+ +G PF+E T + L +++
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 56/296 (18%)
Query: 24 LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 83
V+L + + + +K N DR + ++ + EI ++ L HPNII F D
Sbjct: 35 FGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH 93
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++++V G + I + G L E + +++ ++N L Y H + +H+ +K
Sbjct: 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPE 153
Query: 142 HILISHNGKACLSGLRYMCPFSPTK----KKVHLFPP-----STAYNLNWLSPEVLEQNL 192
+IL P SP K LF + A +++PEV ++++
Sbjct: 154 NILFQDT-----------SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDV 202
Query: 193 DGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDD 252
+ DI+S G+ L G +PF T T+L +++ A T ++
Sbjct: 203 TF---KCDIWSAGVVMYFLLTGCLPF--TGTSLEEVQQKA---------------TYKEP 242
Query: 253 GEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQT 308
C ++ Q +L L++D ++RP A +L H +FKQ
Sbjct: 243 NYAVECRPLTPQAVDLLKQ-------------MLTKDPERRPSAAQVLHHEWFKQA 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 28/220 (12%)
Query: 374 LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 433
V+L + + + +K N DR + ++ + EI ++ L HPNII F D
Sbjct: 35 FGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH 93
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++++V G + I + G L E + +++ ++N L Y H + +H+ +K
Sbjct: 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPE 153
Query: 492 HILISHNGKACLSGLRYMCPFSPTK----KKVHLFPP-----STAYNLNWLSPEVLEQNL 542
+IL P SP K LF + A +++PEV ++++
Sbjct: 154 NILFQDT-----------SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDV 202
Query: 543 DGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLA 582
+ DI+S G+ L G +PF T T+L +++ A
Sbjct: 203 TF---KCDIWSAGVVMYFLLTGCLPF--TGTSLEEVQQKA 237
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 119/300 (39%), Gaps = 36/300 (12%)
Query: 4 LDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--LDRMTDEDLKSLHH 59
L NV +N+ + S+ G + K V N +AVKK +D T+E +
Sbjct: 14 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 73
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPEL---VICH 116
EI M +H N++ + D DL LV M GS D ++ G P L + C
Sbjct: 74 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCK 131
Query: 117 ILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPP 174
I Q NG+ ++H IHR +K+++IL+ A +S GL
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVG 191
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+TAY ++PE L + +SDIYS G+ E+ G +P + L+ +
Sbjct: 192 TTAY----MAPEALRGEI---TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEE 243
Query: 235 TPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRP 294
Y+D +D + + ++ +S+ CL +KRP
Sbjct: 244 IEDEEKTIEDYIDKKMNDADSTSV-----------------EAMYSVASQCLHEKKNKRP 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 343 INDT-FNS-SVETLDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--L 396
++DT F+S S L NV +N+ + S+ G + K V N +AVKK +
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 60
Query: 397 DRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN 456
D T+E + EI M +H N++ + D DL LV M GS D ++
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD- 119
Query: 457 FGLPEL---VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCP 511
G P L + C I Q NG+ ++H IHR +K+++IL+ A +S GL
Sbjct: 120 -GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 512 FSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+TAY ++PE L + +SDIYS G+ E+ G
Sbjct: 179 KFAQXVMXXRIVGTTAY----MAPEALRGEI---TPKSDIYSFGVVLLEIITG 224
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP------IKWTAPESLAYN--KFSIK 190
Query: 199 SDIYSVGISCCELAN-GTVPF 218
SD+++ G+ E+A G P+
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY 211
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP------IKWTAPESLAYN--KFSIK 190
Query: 549 SDIYSVGISCCELAN-GTVPF 568
SD+++ G+ E+A G P+
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 20/232 (8%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHL 67
+Y + LG V + +H++T +AVK N ++ D+ + EI ++
Sbjct: 11 GHYVLGDTLG--VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
RHP+II TD +V + G D I H + E+ + Q +L+ ++Y
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDY 126
Query: 128 IHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
H +HR +K ++L+ N K GL M F ++ + N+ +P
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-------FLRTSCGSPNYAAP 179
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE--TPTTLMLIEKLAGAT 235
EV+ L E DI+S G+ L GT+PF + PT L +K+ G
Sbjct: 180 EVISGRLYAGPE-VDIWSCGVILYALLCGTLPFDDEHVPT---LFKKIRGGV 227
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 20/232 (8%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHL 417
+Y + LG V + +H++T +AVK N ++ D+ + EI ++
Sbjct: 11 GHYVLGDTLG--VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
RHP+II TD +V + G D I H + E+ + Q +L+ ++Y
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDY 126
Query: 478 IHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
H +HR +K ++L+ N K GL M F ++ + N+ +P
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-------FLRTSCGSPNYAAP 179
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE--TPTTLMLIEKLAGAT 585
EV+ L E DI+S G+ L GT+PF + PT L +K+ G
Sbjct: 180 EVISGRLYAGPE-VDIWSCGVILYALLCGTLPFDDEHVPT---LFKKIRGGV 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 96
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 97 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 156
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 157 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 208
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 209 WAFGVLLWEIATYGMSPY 226
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 96
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 97 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 156
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 157 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 208
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 209 WAFGVLLWEIATYGMSPY 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 197
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 197
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 87
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 88 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 147
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 148 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 199
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 200 WAFGVLLWEIATYGMSPY 217
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 87
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 88 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 147
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 148 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 199
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 200 WAFGVLLWEIATYGMSPY 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 95
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 96 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 152 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 195
CL S +R +C +PT +L+PEVL GY
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 196
Query: 196 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+ D +S+G+ +G PF+E T + L +++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 95
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 96 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 502 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 545
CL S +R +C +PT +L+PEVL GY
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 196
Query: 546 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
+ D +S+G+ +G PF+E T + L +++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 95
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 96 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 152 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 195
CL S +R +C +PT +L+PEVL GY
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 196
Query: 196 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+ D +S+G+ +G PF+E T + L +++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 95
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 96 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 502 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 545
CL S +R +C +PT +L+PEVL GY
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 196
Query: 546 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
+ D +S+G+ +G PF+E T + L +++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 36 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 94
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 95 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 152
Query: 152 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 195
CL S +R +C +PT +L+PEVL GY
Sbjct: 153 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 195
Query: 196 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+ D +S+G+ +G PF+E T + L +++
Sbjct: 196 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 234
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 36 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 94
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 95 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 152
Query: 502 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 545
CL S +R +C +PT +L+PEVL GY
Sbjct: 153 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 195
Query: 546 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
+ D +S+G+ +G PF+E T + L +++
Sbjct: 196 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 95
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 96 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 152 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 195
CL S +R +C +PT +L+PEVL GY
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 196
Query: 196 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+ D +S+G+ +G PF+E T + L +++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 37 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 95
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 96 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 153
Query: 502 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 545
CL S +R +C +PT +L+PEVL GY
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 196
Query: 546 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
+ D +S+G+ +G PF+E T + L +++
Sbjct: 197 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 27 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH 86
VY K + +AVK D M +++ E M+ ++HPN++ + +
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 146
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L+
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352
Query: 147 HNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
N K GL R M + T FP + W +PE L N + +SD+++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDVWA 404
Query: 204 VGISCCELAN-GTVPF 218
G+ E+A G P+
Sbjct: 405 FGVLLWEIATYGMSPY 420
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 377 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH 436
VY K + +AVK D M +++ E M+ ++HPN++ + +
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 496
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L+
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352
Query: 497 HNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
N K GL R M + T FP + W +PE L N + +SD+++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDVWA 404
Query: 554 VGISCCELAN-GTVPF 568
G+ E+A G P+
Sbjct: 405 FGVLLWEIATYGMSPY 420
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 197
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 85
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 197
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 198 WAFGVLLWEIATYGMSPY 215
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 13 ICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPN 71
+ ILG+ F ++ L + T+ +AVK LD + +++ E CM+ HPN
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 72 IICYISSFLDATDLHL-----VSPLMGFGSCKD-LINAHFNFG---LPELVICHILQDVL 122
+I + ++ + + + P M +G L+ + G +P + + D+
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK----------KVHLF 172
G+EY+ + F+HR + A + ++ + C++ F +KK ++
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD------FGLSKKIYSGDYYRQGRIAKM 211
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELA-NGTVPF 218
P + W++ E L + Y +SD+++ G++ E+A G P+
Sbjct: 212 P------VKWIAIESLADRV--YTSKSDVWAFGVTMWEIATRGMTPY 250
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 363 ICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPN 421
+ ILG+ F ++ L + T+ +AVK LD + +++ E CM+ HPN
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 422 IICYISSFLDATDLHL-----VSPLMGFGSCKD-LINAHFNFG---LPELVICHILQDVL 472
+I + ++ + + + P M +G L+ + G +P + + D+
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK----------KVHLF 522
G+EY+ + F+HR + A + ++ + C++ F +KK ++
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD------FGLSKKIYSGDYYRQGRIAKM 211
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELA-NGTVPF 568
P + W++ E L + Y +SD+++ G++ E+A G P+
Sbjct: 212 P------VKWIAIESLADRV--YTSKSDVWAFGVTMWEIATRGMTPY 250
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 43 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 101
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 102 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 159
Query: 152 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 195
CL S +R +C +PT +L+PEVL GY
Sbjct: 160 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 202
Query: 196 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKL 231
+ D +S+G+ +G PF+E T + L +++
Sbjct: 203 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLK-SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
KV ++I+ +KF + + D ++ EI ++ L HP II I +F DA D ++V L
Sbjct: 43 KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII-KIKNFFDAEDYYIVLEL 101
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
M G D + N L E +L ++Y+H G IHR +K ++L+S +
Sbjct: 102 MEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 159
Query: 502 CL---------------SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL-EQNLDGY 545
CL S +R +C +PT +L+PEVL GY
Sbjct: 160 CLIKITDFGHSKILGETSLMRTLCG-TPT----------------YLAPEVLVSVGTAGY 202
Query: 546 DERSDIYSVGISCCELANGTVPFAETPTTLMLIEKL 581
+ D +S+G+ +G PF+E T + L +++
Sbjct: 203 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMT---DEDLKSLHHEIVCMR 65
Y+ LG+ ++VY ++ K TNQ++A+KK L + D ++ EI ++
Sbjct: 10 KRYEKLDFLGE--GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
L HPNII + +F +++ LV M + +I + P + ++L L GL
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLM-TLQGL 125
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPF-SPTKKKVHLFPPSTAYNLNWLS 184
EY+H +HR +K +++L+ NG L+ F SP + H + +
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH-----QVVTRWYRA 180
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+L Y D+++VG EL VPF
Sbjct: 181 PELLF-GARMYGVGVDMWAVGCILAELLL-RVPF 212
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMT---DEDLKSLHHEIVCMR 415
Y+ LG+ ++VY ++ K TNQ++A+KK L + D ++ EI ++
Sbjct: 10 KRYEKLDFLGE--GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
L HPNII + +F +++ LV M + +I + P + ++L L GL
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLM-TLQGL 125
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPF-SPTKKKVHLFPPSTAYNLNWLS 534
EY+H +HR +K +++L+ NG L+ F SP + H + +
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH-----QVVTRWYRA 180
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L Y D+++VG EL VPF
Sbjct: 181 PELLF-GARMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 109/241 (45%), Gaps = 27/241 (11%)
Query: 12 KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPN 71
+I ++G+ VY H + +A++ +++R ++ LK+ E++ R RH N
Sbjct: 36 EIGELIGK--GRFGQVY---HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90
Query: 72 IICYISSFLDATDLHLVSPLMGFGSCKDLI-NAHFNFGLPELVICHILQDVLNGLEYIHG 130
++ ++ + + L +++ L + ++ +A + + I Q+++ G+ Y+H
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNK--TRQIAQEIVKGMGYLHA 148
Query: 131 KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKV-----------HLFPPSTA 177
KG +H+ +K+ ++ NGK ++ GL + ++ HL P
Sbjct: 149 KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI-- 205
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPH 237
+ LSP+ E L + + SD++++G EL PF P ++ + G P+
Sbjct: 206 --IRQLSPDTEEDKLP-FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN 262
Query: 238 L 238
L
Sbjct: 263 L 263
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 109/241 (45%), Gaps = 27/241 (11%)
Query: 362 KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPN 421
+I ++G+ VY H + +A++ +++R ++ LK+ E++ R RH N
Sbjct: 36 EIGELIGK--GRFGQVY---HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90
Query: 422 IICYISSFLDATDLHLVSPLMGFGSCKDLI-NAHFNFGLPELVICHILQDVLNGLEYIHG 480
++ ++ + + L +++ L + ++ +A + + I Q+++ G+ Y+H
Sbjct: 91 VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNK--TRQIAQEIVKGMGYLHA 148
Query: 481 KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKV-----------HLFPPSTA 527
KG +H+ +K+ ++ NGK ++ GL + ++ HL P
Sbjct: 149 KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI-- 205
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPH 587
+ LSP+ E L + + SD++++G EL PF P ++ + G P+
Sbjct: 206 --IRQLSPDTEEDKLP-FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN 262
Query: 588 L 588
L
Sbjct: 263 L 263
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIK 190
Query: 199 SDIYSVGISCCELAN-GTVPF 218
SD+++ G+ E+A G P+
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY 211
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ L+ N K GL R M + T FP + W +PE L N + +
Sbjct: 139 NCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIK 190
Query: 549 SDIYSVGISCCELAN-GTVPF 568
SD+++ G+ E+A G P+
Sbjct: 191 SDVWAFGVLLWEIATYGMSPY 211
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 6 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMR 65
N+ + +LG S V+L K ++T +L A+K + SL +EI ++
Sbjct: 6 NIRKTFIFMEVLGS--GAFSEVFLVKQRLTGKLFALKCIKKSPAFRDS--SLENEIAVLK 61
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
++H NI+ + T +LV L+ G D I + + + ++Q VL+ +
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL--VIQQVLSAV 119
Query: 126 EYIHGKGFIHRAVKASHILI---SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNW 182
+Y+H G +HR +K ++L N K ++ F +K + + + +
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITD------FGLSKMEQNGIMSTACGTPGY 173
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKL 231
++PEVL Q Y + D +S+G+ L G PF E T L EK+
Sbjct: 174 VAPEVLAQK--PYSKAVDCWSIGVITYILLCGYPPFYEE-TESKLFEKI 219
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 356 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMR 415
N+ + +LG S V+L K ++T +L A+K + SL +EI ++
Sbjct: 6 NIRKTFIFMEVLGS--GAFSEVFLVKQRLTGKLFALKCIKKSPAFRDS--SLENEIAVLK 61
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
++H NI+ + T +LV L+ G D I + + + ++Q VL+ +
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL--VIQQVLSAV 119
Query: 476 EYIHGKGFIHRAVKASHILI---SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNW 532
+Y+H G +HR +K ++L N K ++ F +K + + + +
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITD------FGLSKMEQNGIMSTACGTPGY 173
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKL 581
++PEVL Q Y + D +S+G+ L G PF E T L EK+
Sbjct: 174 VAPEVLAQK--PYSKAVDCWSIGVITYILLCGYPPFYEE-TESKLFEKI 219
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 20/232 (8%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHL 67
+Y + LG V + +H++T +AVK N ++ D+ + EI ++
Sbjct: 11 GHYVLGDTLG--VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
RHP+II TD +V + G D I H + E+ + Q +L+ ++Y
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDY 126
Query: 128 IHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
H +HR +K ++L+ N K GL M F + + N+ +P
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-------FLRDSCGSPNYAAP 179
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE--TPTTLMLIEKLAGAT 235
EV+ L E DI+S G+ L GT+PF + PT L +K+ G
Sbjct: 180 EVISGRLYAGPE-VDIWSCGVILYALLCGTLPFDDEHVPT---LFKKIRGGV 227
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 20/232 (8%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHL 417
+Y + LG V + +H++T +AVK N ++ D+ + EI ++
Sbjct: 11 GHYVLGDTLG--VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
RHP+II TD +V + G D I H + E+ + Q +L+ ++Y
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDY 126
Query: 478 IHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
H +HR +K ++L+ N K GL M F + + N+ +P
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-------FLRDSCGSPNYAAP 179
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE--TPTTLMLIEKLAGAT 585
EV+ L E DI+S G+ L GT+PF + PT L +K+ G
Sbjct: 180 EVISGRLYAGPE-VDIWSCGVILYALLCGTLPFDDEHVPT---LFKKIRGGV 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 91
HK +NQ AVK + RM K + +C H PNI+ F D LV L
Sbjct: 32 HKKSNQAFAVKIIS-KRMEANTQKEITALKLCEGH---PNIVKLHEVFHDQLHTFLVMEL 87
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG-- 149
+ G + I +F E +I++ +++ + ++H G +HR +K ++L +
Sbjct: 88 LNGGELFERIKKKKHFS--ETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDN 145
Query: 150 ---KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 206
K G + P P + + + + L++ +PE+L QN GYDE D++S+G+
Sbjct: 146 LEIKIIDFGFARLKP--PDNQPL----KTPCFTLHYAAPELLNQN--GYDESCDLWSLGV 197
Query: 207 SCCELANGTVPFAETPTTL 225
+ +G VPF +L
Sbjct: 198 ILYTMLSGQVPFQSHDRSL 216
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPL 441
HK +NQ AVK + RM K + +C H PNI+ F D LV L
Sbjct: 32 HKKSNQAFAVKIIS-KRMEANTQKEITALKLCEGH---PNIVKLHEVFHDQLHTFLVMEL 87
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG-- 499
+ G + I +F E +I++ +++ + ++H G +HR +K ++L +
Sbjct: 88 LNGGELFERIKKKKHFS--ETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDN 145
Query: 500 ---KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGI 556
K G + P P + + + + L++ +PE+L QN GYDE D++S+G+
Sbjct: 146 LEIKIIDFGFARLKP--PDNQPL----KTPCFTLHYAAPELLNQN--GYDESCDLWSLGV 197
Query: 557 SCCELANGTVPFAETPTTL 575
+ +G VPF +L
Sbjct: 198 ILYTMLSGQVPFQSHDRSL 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 109/281 (38%), Gaps = 43/281 (15%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 90
+H + Q+ AVK+ + E + L + R + P + + + D+ +
Sbjct: 54 RHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE 113
Query: 91 LMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISH 147
L S + G +PE ++ I ++ LE++H K IHR VK S++LI+
Sbjct: 114 LXD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 172
Query: 148 NG--KACLSGLR-YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
G K C G+ Y+ P +N PE+ N GY +SDI+S+
Sbjct: 173 LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERIN---PEL---NQKGYSVKSDIWSL 226
Query: 205 GISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQ 264
GI+ ELA P+ T +++ + E+
Sbjct: 227 GITXIELAILRFPYDSWGTPFQQLKQ------------------------------VVEE 256
Query: 265 QTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFF 305
+ L + KFS F CL ++ +RP L QH FF
Sbjct: 257 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 440
+H + Q+ AVK+ + E + L + R + P + + + D+ +
Sbjct: 54 RHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXE 113
Query: 441 LMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISH 497
L S + G +PE ++ I ++ LE++H K IHR VK S++LI+
Sbjct: 114 LXD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 172
Query: 498 NG--KACLSGLR-YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
G K C G+ Y+ P +N PE+ N GY +SDI+S+
Sbjct: 173 LGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERIN---PEL---NQKGYSVKSDIWSL 226
Query: 555 GISCCELANGTVPFAETPTTLMLIEKL 581
GI+ ELA P+ T ++++
Sbjct: 227 GITXIELAILRFPYDSWGTPFQQLKQV 253
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 287
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 288 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL 347
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 348 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 399
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 400 WAFGVLLWEIATYGMSPY 417
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 287
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
++++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 288 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL 347
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 348 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 399
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 400 WAFGVLLWEIATYGMSPY 417
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 99/235 (42%), Gaps = 17/235 (7%)
Query: 16 ILGQCFN--NLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHLRHPNI 72
ILG V + KH++T +AVK N ++ D+ + EI ++ RHP+I
Sbjct: 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 73 ICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKG 132
I +D+ +V + G D I N L E + Q +L+G++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 133 FIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR +K ++L+ N K GL M F + + N+ +PEV+
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-------FLRXSCGSPNYAAPEVISG 189
Query: 191 NLDGYDERSDIYSVGISCCELANGTVPFAE--TPTTLMLIEKLAGATPHLLDCTT 243
L E DI+S G+ L GT+PF + PT I TP L+ +
Sbjct: 190 RLYAGPE-VDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSV 243
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 99/235 (42%), Gaps = 17/235 (7%)
Query: 366 ILGQCFN--NLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHLRHPNI 422
ILG V + KH++T +AVK N ++ D+ + EI ++ RHP+I
Sbjct: 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 423 ICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKG 482
I +D+ +V + G D I N L E + Q +L+G++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 483 FIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR +K ++L+ N K GL M F + + N+ +PEV+
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-------FLRXSCGSPNYAAPEVISG 189
Query: 541 NLDGYDERSDIYSVGISCCELANGTVPFAE--TPTTLMLIEKLAGATPHLLDCTT 593
L E DI+S G+ L GT+PF + PT I TP L+ +
Sbjct: 190 RLYAGPE-VDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSV 243
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 84
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 85 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 145 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 196
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 197 WAFGVLLWEIATYGMSPY 214
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 84
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 85 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 145 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 196
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 197 WAFGVLLWEIATYGMSPY 214
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 195
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 196 WAFGVLLWEIATYGMSPY 213
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 37 QLIAVKKFNLDRMTDEDL------KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 90
++I +F+ R +D++ + +++EI ++ L HPNII F D +LV+
Sbjct: 67 KVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTE 126
Query: 91 LMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH-- 147
G + +IN H E +I++ +L+G+ Y+H +HR +K +IL+ +
Sbjct: 127 FYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN 183
Query: 148 ---NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
N K GL FS K TAY +++PEVL++ Y+E+ D++S
Sbjct: 184 SLLNIKIVDFGLSSF--FSKDYKLRDRL--GTAY---YIAPEVLKKK---YNEKCDVWSC 233
Query: 205 GISCCELANGTVPFA 219
G+ L G PF
Sbjct: 234 GVIMYILLCGYPPFG 248
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 387 QLIAVKKFNLDRMTDEDL------KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 440
++I +F+ R +D++ + +++EI ++ L HPNII F D +LV+
Sbjct: 67 KVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTE 126
Query: 441 LMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH-- 497
G + +IN H E +I++ +L+G+ Y+H +HR +K +IL+ +
Sbjct: 127 FYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN 183
Query: 498 ---NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
N K GL FS K TAY +++PEVL++ Y+E+ D++S
Sbjct: 184 SLLNIKIVDFGLSSF--FSKDYKLRDRL--GTAY---YIAPEVLKKK---YNEKCDVWSC 233
Query: 555 GISCCELANGTVPFA 569
G+ L G PF
Sbjct: 234 GVIMYILLCGYPPFG 248
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 145 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 202 YSVGISCCELAN-GTVPF 218
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
VY K + +AVK D M +++ E M+ ++HPN++ +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 88
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L
Sbjct: 89 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 495 ISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
+ N K GL R M + T FP + W +PE L N + +SD+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDV 200
Query: 552 YSVGISCCELAN-GTVPF 568
++ G+ E+A G P+
Sbjct: 201 WAFGVLLWEIATYGMSPY 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 27 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH 86
VY K + +AVK D M E+ E M+ ++HPN++ + +
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTREPPFY 331
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 146
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L+
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 391
Query: 147 HNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
N K GL R M + T FP + W +PE L N + +SD+++
Sbjct: 392 ENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDVWA 443
Query: 204 VGISCCELAN-GTVPF 218
G+ E+A G P+
Sbjct: 444 FGVLLWEIATYGMSPY 459
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 377 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH 436
VY K + +AVK D M E+ E M+ ++HPN++ + +
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTREPPFY 331
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 496
+++ M +G+ D + + +V+ ++ + + +EY+ K FIHR + A + L+
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 391
Query: 497 HNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
N K GL R M + T FP + W +PE L N + +SD+++
Sbjct: 392 ENHLVKVADFGLSRLMTGDTYTAHAGAKFP------IKWTAPESLAYN--KFSIKSDVWA 443
Query: 554 VGISCCELAN-GTVPF 568
G+ E+A G P+
Sbjct: 444 FGVLLWEIATYGMSPY 459
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 33/336 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+++ S LG N V +H+ + ++A K +L+ + + E+ +
Sbjct: 17 DFERISELGA--GNGGVVTKVQHRPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNS 73
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
P I+ + +F ++ + M GS ++ +PE ++ + VL GL Y+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLR 131
Query: 130 GK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
K +HR VK S+IL++ G+ L C F + + + S ++++PE L
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMAPERL 185
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAG--------ATPHLLD 240
+ Y +SDI+S+G+S ELA G P P +E + G PH +
Sbjct: 186 QGT--HYSVQSDIWSMGLSLVELAVGRYPIP--PPDAKELEAIFGRPVVDGEEGEPHSIS 241
Query: 241 CTTYYVDT-----GQDDGEENAC----SYISEQQTQVLTSRKFSDSFHSIVELCLSRDVD 291
G D A YI + L + F+ F V CL ++
Sbjct: 242 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPA 301
Query: 292 KRPLACNLLQHAFFKQTKKCSVMLPELLRPALSLNE 327
+R L H F K+++ V L L LN+
Sbjct: 302 ERADLKMLTNHTFIKRSEVEEVDFAGWLCKTLRLNQ 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+++ S LG N V +H+ + ++A K +L+ + + E+ +
Sbjct: 17 DFERISELGA--GNGGVVTKVQHRPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNS 73
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
P I+ + +F ++ + M GS ++ +PE ++ + VL GL Y+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLR 131
Query: 480 GK-GFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
K +HR VK S+IL++ G+ L C F + + + S ++++PE L
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKL------CDFGVSGQLIDSMANSFVGTRSYMAPERL 185
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ Y +SDI+S+G+S ELA G P
Sbjct: 186 QGT--HYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 123/311 (39%), Gaps = 50/311 (16%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNL---DRMTDEDLKSLHH----EI 61
NY+ ILG+ + S V HK T + AVK ++ + E+++ L E+
Sbjct: 17 ENYEPKEILGRGVS--SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 62 VCMRHLR-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+R + HPNII ++ T LV LM G D + L E I++
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 132
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
+L + +H +HR +K +IL+ + L+ + C P +K S
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-----RSVCGTP 187
Query: 181 NWLSPEVLE----QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATP 236
++L+PE++E N GY + D++S G+ L G+ PF LML ++G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG--- 244
Query: 237 HLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLA 296
Y + + D +SD+ +V L KR A
Sbjct: 245 ------NYQFGSPEWD--------------------DYSDTVKDLVSRFLVVQPQKRYTA 278
Query: 297 CNLLQHAFFKQ 307
L H FF+Q
Sbjct: 279 EEALAHPFFQQ 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 29/259 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNL---DRMTDEDLKSLHH----EI 411
NY+ ILG+ + S V HK T + AVK ++ + E+++ L E+
Sbjct: 17 ENYEPKEILGRGVS--SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 412 VCMRHLR-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 470
+R + HPNII ++ T LV LM G D + L E I++
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 132
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
+L + +H +HR +K +IL+ + L+ + C P +K S
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-----RSVCGTP 187
Query: 531 NWLSPEVLE----QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAG--- 583
++L+PE++E N GY + D++S G+ L G+ PF LML ++G
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
Query: 584 -ATPHLLDCTTYYVDTGQD 601
+P D Y DT +D
Sbjct: 248 FGSPEWDD----YSDTVKD 262
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 83
V L K K+T A+K +T + +L E+ ++ L HPNI+ F D
Sbjct: 18 GEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR 77
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 143
+ +LV + G D I F E+ I++ VL+G Y+H +HR +K ++
Sbjct: 78 NYYLVMEVYRGGELFDEIILRQKF--SEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENL 135
Query: 144 LISHNGKACL-----SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
L+ + L GL K+ TAY +++PEVL + YDE+
Sbjct: 136 LLESKSRDALIKIVDFGLSAHFEVGGKMKE----RLGTAY---YIAPEVLRKK---YDEK 185
Query: 199 SDIYSVGISCCELANGTVPFA 219
D++S G+ L G PF
Sbjct: 186 CDVWSCGVILYILLCGYPPFG 206
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 433
V L K K+T A+K +T + +L E+ ++ L HPNI+ F D
Sbjct: 18 GEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR 77
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 493
+ +LV + G D I F E+ I++ VL+G Y+H +HR +K ++
Sbjct: 78 NYYLVMEVYRGGELFDEIILRQKF--SEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENL 135
Query: 494 LISHNGKACL-----SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
L+ + L GL K+ TAY +++PEVL + YDE+
Sbjct: 136 LLESKSRDALIKIVDFGLSAHFEVGGKMKE----RLGTAY---YIAPEVLRKK---YDEK 185
Query: 549 SDIYSVGISCCELANGTVPFA 569
D++S G+ L G PF
Sbjct: 186 CDVWSCGVILYILLCGYPPFG 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 52/312 (16%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNL---DRMTDEDLKSLHH----EI 61
NY+ ILG+ + S V HK T + AVK ++ + E+++ L E+
Sbjct: 4 ENYEPKEILGRGVS--SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 61
Query: 62 VCMRHLR-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+R + HPNII ++ T LV LM G D + L E I++
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 119
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHL-FPPSTAYN 179
+L + +H +HR +K +IL+ + L+ + C P +K + PS
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS---- 175
Query: 180 LNWLSPEVLE----QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGAT 235
+L+PE++E N GY + D++S G+ L G+ PF LML ++G
Sbjct: 176 --YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG-- 231
Query: 236 PHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPL 295
Y + + D +SD+ +V L KR
Sbjct: 232 -------NYQFGSPEWD--------------------DYSDTVKDLVSRFLVVQPQKRYT 264
Query: 296 ACNLLQHAFFKQ 307
A L H FF+Q
Sbjct: 265 AEEALAHPFFQQ 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNL---DRMTDEDLKSLHH----EI 411
NY+ ILG+ + S V HK T + AVK ++ + E+++ L E+
Sbjct: 4 ENYEPKEILGRGVS--SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 61
Query: 412 VCMRHLR-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 470
+R + HPNII ++ T LV LM G D + L E I++
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 119
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHL-FPPSTAYN 529
+L + +H +HR +K +IL+ + L+ + C P +K + PS
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS---- 175
Query: 530 LNWLSPEVLE----QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAG-- 583
+L+PE++E N GY + D++S G+ L G+ PF LML ++G
Sbjct: 176 --YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 233
Query: 584 --ATPHLLDCTTYYVDTGQD 601
+P D Y DT +D
Sbjct: 234 QFGSPEWDD----YSDTVKD 249
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 66
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 6 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 121
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 184
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 177
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+L + + SD++++G +L G PF
Sbjct: 178 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 209
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 416
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 6 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 121
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 534
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 177
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L + + SD++++G +L G PF
Sbjct: 178 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 30/236 (12%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT----DLH 86
K ++ N+ +AVK F + D+ +E+ + ++H NI+ +I + T DL
Sbjct: 42 KAQLLNEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH----------GKGFIHR 136
L++ GS D + A+ EL CHI + + GL Y+H HR
Sbjct: 99 LITAFHEKGSLSDFLKANV-VSWNEL--CHIAETMARGLAYLHEDIPGLKDGHKPAISHR 155
Query: 137 AVKASHILISHNGKACLSGLRYMCPFSPTKKK--VHLFPPSTAYNLNWLSPEVLEQNLDG 194
+K+ ++L+ +N AC++ F K H + Y ++PEVLE ++
Sbjct: 156 DIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY----MAPEVLEGAINF 211
Query: 195 YDE---RSDIYSVGISCCELANG-TVPFAETPTTLMLIEKLAGATPHLLDCTTYYV 246
+ R D+Y++G+ ELA+ T ++ E+ G P L D V
Sbjct: 212 QRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVV 267
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 30/236 (12%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT----DLH 436
K ++ N+ +AVK F + D+ +E+ + ++H NI+ +I + T DL
Sbjct: 42 KAQLLNEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH----------GKGFIHR 486
L++ GS D + A+ EL CHI + + GL Y+H HR
Sbjct: 99 LITAFHEKGSLSDFLKANV-VSWNEL--CHIAETMARGLAYLHEDIPGLKDGHKPAISHR 155
Query: 487 AVKASHILISHNGKACLSGLRYMCPFSPTKKK--VHLFPPSTAYNLNWLSPEVLEQNLDG 544
+K+ ++L+ +N AC++ F K H + Y ++PEVLE ++
Sbjct: 156 DIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY----MAPEVLEGAINF 211
Query: 545 YDE---RSDIYSVGISCCELANG-TVPFAETPTTLMLIEKLAGATPHLLDCTTYYV 596
+ R D+Y++G+ ELA+ T ++ E+ G P L D V
Sbjct: 212 QRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVV 267
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 66
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 7 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 122
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 184
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 178
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+L + + SD++++G +L G PF
Sbjct: 179 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 210
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 416
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 7 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 122
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 534
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 178
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L + + SD++++G +L G PF
Sbjct: 179 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 66
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 9 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 124
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 184
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 180
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+L + + SD++++G +L G PF
Sbjct: 181 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 212
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 416
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 9 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 124
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 534
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 180
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L + + SD++++G +L G PF
Sbjct: 181 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 83
V L K K+T A+K +T + +L E+ ++ L HPNI+ F D
Sbjct: 35 GEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR 94
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 143
+ +LV + G D I F E+ I++ VL+G Y+H +HR +K ++
Sbjct: 95 NYYLVMEVYRGGELFDEIILRQKFS--EVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENL 152
Query: 144 LISHNGKACL-----SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
L+ + L GL K K L TAY +++PEVL + YDE+
Sbjct: 153 LLESKSRDALIKIVDFGLSAHFEVG-GKMKERL---GTAY---YIAPEVLRKK---YDEK 202
Query: 199 SDIYSVGISCCELANGTVPFA 219
D++S G+ L G PF
Sbjct: 203 CDVWSCGVILYILLCGYPPFG 223
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 433
V L K K+T A+K +T + +L E+ ++ L HPNI+ F D
Sbjct: 35 GEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR 94
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 493
+ +LV + G D I F E+ I++ VL+G Y+H +HR +K ++
Sbjct: 95 NYYLVMEVYRGGELFDEIILRQKFS--EVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENL 152
Query: 494 LISHNGKACL-----SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
L+ + L GL K K L TAY +++PEVL + YDE+
Sbjct: 153 LLESKSRDALIKIVDFGLSAHFEVG-GKMKERL---GTAY---YIAPEVLRKK---YDEK 202
Query: 549 SDIYSVGISCCELANGTVPFA 569
D++S G+ L G PF
Sbjct: 203 CDVWSCGVILYILLCGYPPFG 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 19 QCFNN--LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL--KSLHHEIVCMRHLRHPNIIC 74
QC V+ +K+KV + A+K+ R+ + +L + + E+ + L HP I+
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 75 YISSFLDATDLHLVSP------------LMGFGSCKDLINAHFNFGLPELVIC-HILQDV 121
Y +++L+ + P L + KD +N E +C HI +
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
+E++H KG +HR +K S+I + + + + +++ + P AY +
Sbjct: 128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 182 --------WLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
++SPE + N Y + DI+S+G+ EL
Sbjct: 188 TGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 369 QCFNN--LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL--KSLHHEIVCMRHLRHPNIIC 424
QC V+ +K+KV + A+K+ R+ + +L + + E+ + L HP I+
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 425 YISSFLDATDLHLVSP------------LMGFGSCKDLINAHFNFGLPELVIC-HILQDV 471
Y +++L+ + P L + KD +N E +C HI +
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
+E++H KG +HR +K S+I + + + + +++ + P AY +
Sbjct: 128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 532 --------WLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
++SPE + N Y + DI+S+G+ EL
Sbjct: 188 TGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 122/295 (41%), Gaps = 53/295 (17%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
VG+ E+ G V F T +IE+L +P + V T EN Y
Sbjct: 211 VGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV----ENRPKY 266
Query: 261 ISEQQTQVLTSRKF-SDSFHSIVELCLSRDV---------DKRPLACNLLQHAFF 305
++ F +DS H+ ++ +RD+ KR LQH +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLL 589
VG+ E+ G V F T +IE+L +P +
Sbjct: 211 VGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 66
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 8 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 123
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 184
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 179
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+L + + SD++++G +L G PF
Sbjct: 180 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 211
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRH 416
P ++K ILG+ + S+V L++ T++ A+K + E+ + + E M
Sbjct: 8 PEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L HP + +F D L+ G I +F E ++++ LE
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALE 123
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLS 534
Y+HGKG IHR +K +IL++ + ++ SP K + + F + Y +S
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VS 179
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L + + SD++++G +L G PF
Sbjct: 180 PELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 52/312 (16%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNL---DRMTDEDLKSLHH----EI 61
NY+ ILG+ + S V HK T + AVK ++ + E+++ L E+
Sbjct: 17 ENYEPKEILGRGVS--SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 62 VCMRHLR-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+R + HPNII ++ T LV LM G D + L E I++
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 132
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHL-FPPSTAYN 179
+L + +H +HR +K +IL+ + L+ + C P +K + PS
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS---- 188
Query: 180 LNWLSPEVLE----QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGAT 235
+L+PE++E N GY + D++S G+ L G+ PF LML ++G
Sbjct: 189 --YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG-- 244
Query: 236 PHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPL 295
Y + + D +SD+ +V L KR
Sbjct: 245 -------NYQFGSPEWD--------------------DYSDTVKDLVSRFLVVQPQKRYT 277
Query: 296 ACNLLQHAFFKQ 307
A L H FF+Q
Sbjct: 278 AEEALAHPFFQQ 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 31/260 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNL---DRMTDEDLKSLHH----EI 411
NY+ ILG+ + S V HK T + AVK ++ + E+++ L E+
Sbjct: 17 ENYEPKEILGRGVS--SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 412 VCMRHLR-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 470
+R + HPNII ++ T LV LM G D + L E I++
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 132
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHL-FPPSTAYN 529
+L + +H +HR +K +IL+ + L+ + C P +K + PS
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS---- 188
Query: 530 LNWLSPEVLE----QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAG-- 583
+L+PE++E N GY + D++S G+ L G+ PF LML ++G
Sbjct: 189 --YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY 246
Query: 584 --ATPHLLDCTTYYVDTGQD 601
+P D Y DT +D
Sbjct: 247 QFGSPEWDD----YSDTVKD 262
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 122/295 (41%), Gaps = 53/295 (17%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
VG+ E+ G V F T +IE+L +P + V T EN Y
Sbjct: 211 VGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV----ENRPKY 266
Query: 261 ISEQQTQVLTSRKF-SDSFHSIVELCLSRDV---------DKRPLACNLLQHAFF 305
++ F +DS H+ ++ +RD+ KR LQH +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 39/219 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLL 589
VG+ E+ G V F T +IE+L +P +
Sbjct: 211 VGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVTN----QLIAVKKFNLDRMTDEDLKSLHHEIVC 63
PS +++ +LGQ + V+L K K++ QL A+K + D E
Sbjct: 23 PSQFELLKVLGQ--GSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 64 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
+ + HP I+ +F L+L+ + G ++ F E + L ++
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 137
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
L+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY----M 193
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 239
+PEV+ N G+ + +D +S G+ E+ GT+PF + T+ +I K P L
Sbjct: 194 APEVV--NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVTN----QLIAVKKFNLDRMTDEDLKSLHHEIVC 413
PS +++ +LGQ + V+L K K++ QL A+K + D E
Sbjct: 23 PSQFELLKVLGQ--GSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 414 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
+ + HP I+ +F L+L+ + G ++ F E + L ++
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 137
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
L+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY----M 193
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 589
+PEV+ N G+ + +D +S G+ E+ GT+PF + T+ +I K P L
Sbjct: 194 APEVV--NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVTN----QLIAVKKFNLDRMTDEDLKSLHHEIVC 63
PS +++ +LGQ + V+L K K++ QL A+K + D E
Sbjct: 24 PSQFELLKVLGQ--GSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 64 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
+ + HP I+ +F L+L+ + G ++ F E + L ++
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 138
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
L+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY----M 194
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 239
+PEV+ N G+ + +D +S G+ E+ GT+PF + T+ +I K P L
Sbjct: 195 APEVV--NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 250
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVTN----QLIAVKKFNLDRMTDEDLKSLHHEIVC 413
PS +++ +LGQ + V+L K K++ QL A+K + D E
Sbjct: 24 PSQFELLKVLGQ--GSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 414 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
+ + HP I+ +F L+L+ + G ++ F E + L ++
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 138
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
L+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY----M 194
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 589
+PEV+ N G+ + +D +S G+ E+ GT+PF + T+ +I K P L
Sbjct: 195 APEVV--NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 250
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVT----NQLIAVKKFNLDRMTDEDLKSLHHEIVC 63
PS +++ +LGQ + V+L K K++ QL A+K + D E
Sbjct: 23 PSQFELLKVLGQ--GSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 64 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
+ + HP I+ +F L+L+ + G ++ F E + L ++
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 137
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
L+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY----M 193
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 239
+PEV+ N G+ + +D +S G+ E+ GT+PF + T+ +I K P L
Sbjct: 194 APEVV--NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVT----NQLIAVKKFNLDRMTDEDLKSLHHEIVC 413
PS +++ +LGQ + V+L K K++ QL A+K + D E
Sbjct: 23 PSQFELLKVLGQ--GSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 414 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
+ + HP I+ +F L+L+ + G ++ F E + L ++
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 137
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
L+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEY----M 193
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 589
+PEV+ N G+ + +D +S G+ E+ GT+PF + T+ +I K P L
Sbjct: 194 APEVV--NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKM 61
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKM 61
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 18/242 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 18 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 69 HPNIICYIS---SFLDATDLHLVSPLMGFGSCKD-----LINAHFNFGLPELVICHILQD 120
H N++ I + + S + F C+ L N F L E I ++Q
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
+LNGL YIH +HR +KA+++LI+ +G L+ FS K + L
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKLAGA-TP 236
+ PE+L D Y D++ G E+ + P + T L LI +L G+ TP
Sbjct: 194 WYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLCGSITP 251
Query: 237 HL 238
+
Sbjct: 252 EV 253
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 18/242 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 18 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 419 HPNIICYIS---SFLDATDLHLVSPLMGFGSCKD-----LINAHFNFGLPELVICHILQD 470
H N++ I + + S + F C+ L N F L E I ++Q
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQM 133
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
+LNGL YIH +HR +KA+++LI+ +G L+ FS K + L
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKLAGA-TP 586
+ PE+L D Y D++ G E+ + P + T L LI +L G+ TP
Sbjct: 194 WYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQLCGSITP 251
Query: 587 HL 588
+
Sbjct: 252 EV 253
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 92
T +++AVK D + EI +R L H +II Y DA L LV +
Sbjct: 59 TGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
GS +D + H + GL +L++ Q + G+ Y+H + +IHR + A ++L+ ++
Sbjct: 118 PLGSLRDYLPRH-SIGLAQLLL--FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVK 174
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL P +V S + W +PE L++ Y SD++S G++ E
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVF---WYAPECLKEYKFYY--ASDVWSFGVTLYE 229
Query: 211 L 211
L
Sbjct: 230 L 230
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDA--TDLHLVSPLM 442
T +++AVK D + EI +R L H +II Y DA L LV +
Sbjct: 59 TGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
GS +D + H + GL +L++ Q + G+ Y+H + +IHR + A ++L+ ++
Sbjct: 118 PLGSLRDYLPRH-SIGLAQLLL--FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVK 174
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL P +V S + W +PE L++ Y SD++S G++ E
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVF---WYAPECLKEYKFYY--ASDVWSFGVTLYE 229
Query: 561 L 561
L
Sbjct: 230 L 230
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHLR 68
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 33 DFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HP + +F D L+ G I +F E ++++ LEY+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD--ETCTRFYTAEIVSALEYL 148
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
HGKG IHR +K +IL++ + ++ SP K+ S ++SPE+L
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPELL 206
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + SD++++G +L G PF
Sbjct: 207 TEK--SASKSSDLWALGCIIYQLVAGLPPF 234
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHLR 418
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 33 DFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 90
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HP + +F D L+ G I +F E ++++ LEY+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD--ETCTRFYTAEIVSALEYL 148
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
HGKG IHR +K +IL++ + ++ SP K+ S ++SPE+L
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPELL 206
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + SD++++G +L G PF
Sbjct: 207 TEK--SASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 8 PSNYKICSILGQCFNNLSSVYLSKHKVTN----QLIAVKKFNLDRMTDEDLKSLHHEIVC 63
PS++++ +LGQ + V+L + KVT L A+K + D E
Sbjct: 27 PSHFELLKVLGQ--GSFGKVFLVR-KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 64 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
+ + HP ++ +F L+L+ + G ++ F E + L ++
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 141
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
GL+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY----M 197
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 239
+PEV+ N G+ +D +S G+ E+ G++PF + T+ LI K P L
Sbjct: 198 APEVV--NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFL 253
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)
Query: 358 PSNYKICSILGQCFNNLSSVYLSKHKVTN----QLIAVKKFNLDRMTDEDLKSLHHEIVC 413
PS++++ +LGQ + V+L + KVT L A+K + D E
Sbjct: 27 PSHFELLKVLGQ--GSFGKVFLVR-KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 414 MRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
+ + HP ++ +F L+L+ + G ++ F E + L ++
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDVKFYLAELAL 141
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
GL+++H G I+R +K +IL+ G L+ +KK + F + Y +
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEY----M 197
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF--AETPTTLMLIEKLAGATPHLL 589
+PEV+ N G+ +D +S G+ E+ G++PF + T+ LI K P L
Sbjct: 198 APEVV--NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFL 253
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 18 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF------GLPELV--------I 114
H N++ I SP + CK I F+F GL V I
Sbjct: 76 HENVVNLIEICRTKA-----SP---YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 174
++Q +LNGL YIH +HR +KA+++LI+ +G L+ FS K
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKL 231
+ L + PE+L D Y D++ G E+ + P + T L LI +L
Sbjct: 188 NRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQL 245
Query: 232 AGA-TPHL 238
G+ TP +
Sbjct: 246 CGSITPEV 253
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 18 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF------GLPELV--------I 464
H N++ I SP + CK I F+F GL V I
Sbjct: 76 HENVVNLIEICRTKA-----SP---YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 524
++Q +LNGL YIH +HR +KA+++LI+ +G L+ FS K
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKL 581
+ L + PE+L D Y D++ G E+ + P + T L LI +L
Sbjct: 188 NRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQL 245
Query: 582 AGA-TPHL 588
G+ TP +
Sbjct: 246 CGSITPEV 253
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 29/281 (10%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
+ A+KK L++ DE + S EI ++ L+H NI+ L LV +
Sbjct: 26 GETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD- 83
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
K L++ GL + L +LNG+ Y H + +HR +K ++LI+ G+ ++
Sbjct: 84 QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
Query: 155 GLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 213
F P +K H L + +P+VL Y DI+SVG E+ N
Sbjct: 143 DFGLARAFGIPVRKYTH-----EVVTLWYRAPDVL-MGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 214 GT--VPFAETPTTLMLIEKLAGA-----TPHLLDCTTYYVDTGQDDGEENACSYISEQQT 266
GT P LM I ++ G P++ + Y + N Y
Sbjct: 197 GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY---------DPNFTVYEPLPWE 247
Query: 267 QVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQ 307
L + +S ++ L D ++R A L+HA+FK+
Sbjct: 248 SFL--KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
+ A+KK L++ DE + S EI ++ L+H NI+ L LV +
Sbjct: 26 GETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD- 83
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
K L++ GL + L +LNG+ Y H + +HR +K ++LI+ G+ ++
Sbjct: 84 QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
Query: 505 GLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 563
F P +K H L + +P+VL Y DI+SVG E+ N
Sbjct: 143 DFGLARAFGIPVRKYTH-----EVVTLWYRAPDVL-MGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 564 GT--VPFAETPTTLMLIEKLAGATPH 587
GT P LM I ++ G TP+
Sbjct: 197 GTPLFPGVSEADQLMRIFRILG-TPN 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMXGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 18 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF------GLPELV--------I 114
H N++ I SP + CK I F+F GL V I
Sbjct: 76 HENVVNLIEICRTKA-----SP---YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 174
++Q +LNGL YIH +HR +KA+++LI+ +G L+ FS K
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKL 231
+ L + PE+L D Y D++ G E+ + P + T L LI +L
Sbjct: 188 NRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQL 245
Query: 232 AGA-TPHL 238
G+ TP +
Sbjct: 246 CGSITPEV 253
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 18 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF------GLPELV--------I 464
H N++ I SP + CK I F+F GL V I
Sbjct: 76 HENVVNLIEICRTKA-----SP---YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 127
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 524
++Q +LNGL YIH +HR +KA+++LI+ +G L+ FS K
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKL 581
+ L + PE+L D Y D++ G E+ + P + T L LI +L
Sbjct: 188 NRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQL 245
Query: 582 AGA-TPHL 588
G+ TP +
Sbjct: 246 CGSITPEV 253
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
+L++ + + E D++S GI + G +P+ +
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+L++ + + E D++S GI + G +P+ +
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 39 IAVKKFNLDRMTDEDL----KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
+AVK D DED+ +++ E L+HPNII L +L LV M F
Sbjct: 33 VAVKAARHD--PDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV---MEF 87
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGF---IHRAVKASHILI---SHN 148
L +P ++ + + G+ Y+H + IHR +K+S+ILI N
Sbjct: 88 ARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147
Query: 149 GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISC 208
G L+ + F ++ S A W++PEV+ ++ + + SD++S G+
Sbjct: 148 GDLSNKILK-ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM--FSKGSDVWSYGVLL 204
Query: 209 CELANGTVPF 218
EL G VPF
Sbjct: 205 WELLTGEVPF 214
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 389 IAVKKFNLDRMTDEDL----KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
+AVK D DED+ +++ E L+HPNII L +L LV M F
Sbjct: 33 VAVKAARHD--PDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV---MEF 87
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGF---IHRAVKASHILI---SHN 498
L +P ++ + + G+ Y+H + IHR +K+S+ILI N
Sbjct: 88 ARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN 147
Query: 499 GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISC 558
G L+ + F ++ S A W++PEV+ ++ + + SD++S G+
Sbjct: 148 GDLSNKILK-ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASM--FSKGSDVWSYGVLL 204
Query: 559 CELANGTVPF 568
EL G VPF
Sbjct: 205 WELLTGEVPF 214
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 17 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 74
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF------GLPELV--------I 114
H N++ I SP + CK I F+F GL V I
Sbjct: 75 HENVVNLIEICRTKA-----SP---YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 126
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 174
++Q +LNGL YIH +HR +KA+++LI+ +G L+ FS K
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKL 231
+ L + PE+L D Y D++ G E+ + P + T L LI +L
Sbjct: 187 NRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQL 244
Query: 232 AGA-TPHL 238
G+ TP +
Sbjct: 245 CGSITPEV 252
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 30/248 (12%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y+ + +GQ V+ ++H+ T Q +A+KK ++ + + EI ++ L+
Sbjct: 17 SKYEKLAKIGQ--GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 74
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF------GLPELV--------I 464
H N++ I SP + CK I F+F GL V I
Sbjct: 75 HENVVNLIEICRTKA-----SP---YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI 126
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPP 524
++Q +LNGL YIH +HR +KA+++LI+ +G L+ FS K
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPT---TLMLIEKL 581
+ L + PE+L D Y D++ G E+ + P + T L LI +L
Sbjct: 187 NRVVTLWYRPPELLLGERD-YGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQHQLALISQL 244
Query: 582 AGA-TPHL 588
G+ TP +
Sbjct: 245 CGSITPEV 252
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 220
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+L++ + + E D++S GI + G +P+ +
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SAXKSSDLWALGCIIYQLVAGLPPF 234
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 114 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 168
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M PF T+ + +PEV+ GY E DI+S
Sbjct: 169 ILDFGLARTAGTSFMMVPFVVTR--------------YYRAPEVILGM--GYKENVDIWS 212
Query: 204 VGISCCELANGTVPFAET 221
VG E+ G V F T
Sbjct: 213 VGCIMGEMIKGGVLFPGT 230
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 114 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 168
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M PF T+ + +PEV+ GY E DI+S
Sbjct: 169 ILDFGLARTAGTSFMMVPFVVTR--------------YYRAPEVILGM--GYKENVDIWS 212
Query: 554 VGISCCELANGTVPFAET 571
VG E+ G V F T
Sbjct: 213 VGCIMGEMIKGGVLFPGT 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 5 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 59
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 117
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 175
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 176 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 206
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 5 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 59
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 117
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 175
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 176 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 176
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 6 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 60
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 118
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 176
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 177 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
+V+ +K++ T++++A+K+ LD + S EI ++ L+H NI+
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 85 LHLVSPLMGFGSCKDLINAHF---NFGL-PELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
L LV F C + +F N L PE+V + Q +L GL + H + +HR +K
Sbjct: 76 LTLV-----FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSRNVLHRDLKP 129
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN----WLSPEVLEQNLDGYD 196
++LI+ NG+ L+ F P Y+ W P + Y
Sbjct: 130 QNLLINRNGELKLADFGLARAFG---------IPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 197 ERSDIYSVGISCCELANGTVPF 218
D++S G ELAN P
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
+V+ +K++ T++++A+K+ LD + S EI ++ L+H NI+
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 435 LHLVSPLMGFGSCKDLINAHF---NFGL-PELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
L LV F C + +F N L PE+V + Q +L GL + H + +HR +K
Sbjct: 76 LTLV-----FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSRNVLHRDLKP 129
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN----WLSPEVLEQNLDGYD 546
++LI+ NG+ L+ F P Y+ W P + Y
Sbjct: 130 QNLLINRNGELKLADFGLARAFG---------IPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 547 ERSDIYSVGISCCELANGTVPF 568
D++S G ELAN P
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 29/281 (10%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
+ A+KK L++ DE + S EI ++ L+H NI+ L LV +
Sbjct: 26 GETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD- 83
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
K L++ GL + L +LNG+ Y H + +HR +K ++LI+ G+ ++
Sbjct: 84 QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
Query: 155 GLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 213
F P +K H L + +P+VL Y DI+SVG E+ N
Sbjct: 143 DFGLARAFGIPVRKYTH-----EIVTLWYRAPDVL-MGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 214 GT--VPFAETPTTLMLIEKLAGA-----TPHLLDCTTYYVDTGQDDGEENACSYISEQQT 266
GT P LM I ++ G P++ + Y + N Y
Sbjct: 197 GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY---------DPNFTVYEPLPWE 247
Query: 267 QVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQ 307
L + +S ++ L D ++R A L+HA+FK+
Sbjct: 248 SFL--KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
+ A+KK L++ DE + S EI ++ L+H NI+ L LV +
Sbjct: 26 GETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD- 83
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
K L++ GL + L +LNG+ Y H + +HR +K ++LI+ G+ ++
Sbjct: 84 QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
Query: 505 GLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 563
F P +K H L + +P+VL Y DI+SVG E+ N
Sbjct: 143 DFGLARAFGIPVRKYTH-----EIVTLWYRAPDVL-MGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 564 GT--VPFAETPTTLMLIEKLAGATPH 587
GT P LM I ++ G TP+
Sbjct: 197 GTPLFPGVSEADQLMRIFRILG-TPN 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI +
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKM 61
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 44/271 (16%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
VG E+ G V F T +IE+L +P + V T EN Y
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV----ENRPKY 266
Query: 261 ISEQQTQVLTSRKF-SDSFHSIVELCLSRDV 290
++ F +DS H+ ++ +RD+
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDL 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLL 589
VG E+ G V F T +IE+L +P +
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 29 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 86
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 144
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 187
+HGKG IHR +K +IL++ + ++ SP K+ S ++SPE+
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPEL 202
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPF 218
L + + SD++++G +L G PF
Sbjct: 203 LTEK--SACKSSDLWALGCIIYQLVAGLPPF 231
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 29 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 86
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 144
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 537
+HGKG IHR +K +IL++ + ++ SP K+ S ++SPE+
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPEL 202
Query: 538 LEQNLDGYDERSDIYSVGISCCELANGTVPF 568
L + + SD++++G +L G PF
Sbjct: 203 LTEK--SACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMR 65
+++I LG + V+L + + + A+K + + LK + H E + +
Sbjct: 6 QDFQILRTLGT--GSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLS 61
Query: 66 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
+ HP II +F DA + ++ + G L+ F P V +V L
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF--PNPVAKFYAAEVCLAL 119
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----N 181
EY+H K I+R +K +IL+ NG ++ + + P Y L +
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK-----------YVPDVTYXLCGTPD 168
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+++PEV+ + Y++ D +S GI E+ G PF ++ T+ EK+ A
Sbjct: 169 YIAPEVV--STKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILNA 218
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMR 415
+++I LG + V+L + + + A+K + + LK + H E + +
Sbjct: 6 QDFQILRTLGT--GSFGRVHLIRSRHNGRYYAMKVLKKEIVVR--LKQVEHTNDERLMLS 61
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
+ HP II +F DA + ++ + G L+ F P V +V L
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF--PNPVAKFYAAEVCLAL 119
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----N 531
EY+H K I+R +K +IL+ NG ++ + + P Y L +
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK-----------YVPDVTYXLCGTPD 168
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
+++PEV+ + Y++ D +S GI E+ G PF ++ T+ EK+ A
Sbjct: 169 YIAPEVV--STKPYNKSIDWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILNA 218
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 17 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 68
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 69 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 126
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 177
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 17 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 68
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 69 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 126
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 177
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHLR 68
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 34 DFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 91
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HP + +F D L+ G I +F E ++++ LEY+
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYL 149
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 188
HGKG IHR +K +IL++ + ++ SP K+ S ++SPE+L
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPELL 207
Query: 189 EQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + SD++++G +L G PF
Sbjct: 208 TEK--SACKSSDLWALGCIIYQLVAGLPPF 235
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHLR 418
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 34 DFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 91
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HP + +F D L+ G I +F E ++++ LEY+
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYL 149
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVL 538
HGKG IHR +K +IL++ + ++ SP K+ S ++SPE+L
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--ANSFVGTAQYVSPELL 207
Query: 539 EQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + SD++++G +L G PF
Sbjct: 208 TEK--SACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 193 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGNMSPE---AFLQEAQVMKKLRHEKLV-Q 244
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 245 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 302
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP------IKWTAPEAA-- 354
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 355 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 383
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 193 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGNMSPE---AFLQEAQVMKKLRHEKLV-Q 244
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 245 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 302
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP------IKWTAPEAA-- 354
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 355 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 383
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
+V+ +K++ T++++A+K+ LD + S EI ++ L+H NI+
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 85 LHLVSPLMGFGSCKDLINAHF---NFGL-PELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
L LV F C + +F N L PE+V + Q +L GL + H + +HR +K
Sbjct: 76 LTLV-----FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSRNVLHRDLKP 129
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN----WLSPEVLEQNLDGYD 196
++LI+ NG+ L+ F P Y+ W P + Y
Sbjct: 130 QNLLINRNGELKLANFGLARAFG---------IPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 197 ERSDIYSVGISCCELANGTVPF 218
D++S G ELAN P
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
+V+ +K++ T++++A+K+ LD + S EI ++ L+H NI+
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 435 LHLVSPLMGFGSCKDLINAHF---NFGL-PELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
L LV F C + +F N L PE+V + Q +L GL + H + +HR +K
Sbjct: 76 LTLV-----FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ-LLKGLGFCHSRNVLHRDLKP 129
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN----WLSPEVLEQNLDGYD 546
++LI+ NG+ L+ F P Y+ W P + Y
Sbjct: 130 QNLLINRNGELKLANFGLARAFG---------IPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 547 ERSDIYSVGISCCELANGTVPF 568
D++S G ELAN P
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRHL 67
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI + L
Sbjct: 7 DWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
H N++ + + +L G D I + G+PE ++ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 187
+HG G HR +K ++L+ +S F ++ L L +++PE+
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPEL 177
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPF 218
L++ + + E D++S GI + G +P+
Sbjct: 178 LKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRHL 417
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI + L
Sbjct: 7 DWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 61
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
H N++ + + +L G D I + G+PE ++ G+ Y
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 119
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 537
+HG G HR +K ++L+ +S F ++ L L +++PE+
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPEL 177
Query: 538 LEQNLDGYDERSDIYSVGISCCELANGTVPF 568
L++ + + E D++S GI + G +P+
Sbjct: 178 LKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRHL 67
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI + L
Sbjct: 8 DWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
H N++ + + +L G D I + G+PE ++ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 120
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 187
+HG G HR +K ++L+ +S F ++ L L +++PE+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPEL 178
Query: 188 LEQNLDGYDERSDIYSVGISCCELANGTVPF 218
L++ + + E D++S GI + G +P+
Sbjct: 179 LKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRHL 417
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI + L
Sbjct: 8 DWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKML 62
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
H N++ + + +L G D I + G+PE ++ G+ Y
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVY 120
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEV 537
+HG G HR +K ++L+ +S F ++ L L +++PE+
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--KMCGTLPYVAPEL 178
Query: 538 LEQNLDGYDERSDIYSVGISCCELANGTVPF 568
L++ + + E D++S GI + G +P+
Sbjct: 179 LKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 15 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 66
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 67 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 124
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 175
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 205
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 15 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 66
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 67 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 124
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 175
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K+ + A+ ++SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR----ANAFVGTAQYVSP 201
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K+ + A+ ++SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR----ANAFVGTAQYVSP 201
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 9/213 (4%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE-DLKSLHHEIVCMRHLRHPNIICYISSFL 80
N SV +++ + I V L + T++ D + + E M L +P I+ I
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VC 79
Query: 81 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
A L LV + G G + +P + +L V G++Y+ K F+HR + A
Sbjct: 80 QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAA 138
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 200
++L+ + A +S + + + L W +PE + N + RSD
Sbjct: 139 RNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECI--NFRKFSSRSD 195
Query: 201 IYSVGISCCE-LANGTVPFAET--PTTLMLIEK 230
++S G++ E L+ G P+ + P + IE+
Sbjct: 196 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 9/213 (4%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE-DLKSLHHEIVCMRHLRHPNIICYISSFL 430
N SV +++ + I V L + T++ D + + E M L +P I+ I
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VC 79
Query: 431 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
A L LV + G G + +P + +L V G++Y+ K F+HR + A
Sbjct: 80 QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAA 138
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
++L+ + A +S + + + L W +PE + N + RSD
Sbjct: 139 RNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECI--NFRKFSSRSD 195
Query: 551 IYSVGISCCE-LANGTVPFAET--PTTLMLIEK 580
++S G++ E L+ G P+ + P + IE+
Sbjct: 196 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 5 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
+++ Y +LG S V L++ K T +L+A+K + + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVL 70
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 124
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 125 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 180
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 355 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
+++ Y +LG S V L++ K T +L+A+K + + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVL 70
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 474
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 475 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 530
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD------EDLKSLHHEIVCM 64
Y++C ++G+ S V ++ T Q AVK ++ + T EDLK E
Sbjct: 26 YELCEVIGK--GAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REASIC 80
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLM-GFGSCKDLI-NAHFNFGLPELVICHILQDVL 122
L+HP+I+ + ++ L++V M G C +++ A F E V H ++ +L
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNW 182
L Y H IHR VK ++L++ + L + + L ++
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFG-VAIQLGESGLVAGGRVGTPHF 199
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 226
++PEV+++ + Y + D++ G+ L +G +PF T L
Sbjct: 200 MAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF 241
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 16/224 (7%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD------EDLKSLHHEIVCM 414
Y++C ++G+ S V ++ T Q AVK ++ + T EDLK E
Sbjct: 26 YELCEVIGK--GAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REASIC 80
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLM-GFGSCKDLI-NAHFNFGLPELVICHILQDVL 472
L+HP+I+ + ++ L++V M G C +++ A F E V H ++ +L
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNW 532
L Y H IHR VK ++L++ + L + + L ++
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFG-VAIQLGESGLVAGGRVGTPHF 199
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 576
++PEV+++ + Y + D++ G+ L +G +PF T L
Sbjct: 200 MAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF 241
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHH 59
M T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 4 MTTPSHLSDRYELGEILG--FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 60 EIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPELVIC 115
E L HP I+ + T ++V + + +D+++ P+ I
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAI- 119
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
++ D L + H G IHR VK ++ILIS + + + V +
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT-AA 178
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 225
+LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 179 VIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-S 406
S + T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 1 GSHMTTPSHLSDRYELGEILG--FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR 58
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPEL 462
E L HP I+ + T ++V + + +D+++ P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKR 117
Query: 463 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 522
I ++ D L + H G IHR VK ++ILIS + + + V
Sbjct: 118 AI-EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQT 176
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 575
+ +LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 177 -AAVIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 3 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIV 62
T ++ Y + + +G+ + V ++ K T A KK + + ED+ EI
Sbjct: 20 TKGDINQYYTLENTIGR--GSWGEVKIAVQKGTRIRRAAKK--IPKYFVEDVDRFKQEIE 75
Query: 63 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 122
M+ L HPNII +F D TD++LV L G + + F E I++DVL
Sbjct: 76 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVL 133
Query: 123 NGLEYIHGKGFIHRAVKASHILI---SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
+ + Y H HR +K + L S + L F P K+ T Y
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPY- 190
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGAT 235
++SP+VLE Y D +S G+ L G PF+ PT ++ K+ T
Sbjct: 191 --YVSPQVLE---GLYGPECDEWSAGVMMYVLLCGYPPFS-APTDXEVMLKIREGT 240
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 353 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIV 412
T ++ Y + + +G+ + V ++ K T A KK + + ED+ EI
Sbjct: 20 TKGDINQYYTLENTIGR--GSWGEVKIAVQKGTRIRRAAKK--IPKYFVEDVDRFKQEIE 75
Query: 413 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 472
M+ L HPNII +F D TD++LV L G + + F E I++DVL
Sbjct: 76 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVL 133
Query: 473 NGLEYIHGKGFIHRAVKASHILI---SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
+ + Y H HR +K + L S + L F P K+ T Y
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPY- 190
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGAT 585
++SP+VLE Y D +S G+ L G PF+ PT ++ K+ T
Sbjct: 191 --YVSPQVLE---GLYGPECDEWSAGVMMYVLLCGYPPFS-APTDXEVMLKIREGT 240
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 192 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 243
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 301
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 353
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 354 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 192 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 243
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 301
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 353
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 354 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 192 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 243
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 301
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 353
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 354 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 192 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 243
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 301
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 353
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 354 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 3 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIV 62
T ++ Y + + +G+ + V ++ K T A KK + + ED+ EI
Sbjct: 3 TKGDINQYYTLENTIGR--GSWGEVKIAVQKGTRIRRAAKK--IPKYFVEDVDRFKQEIE 58
Query: 63 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 122
M+ L HPNII +F D TD++LV L G + + F E I++DVL
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVL 116
Query: 123 NGLEYIHGKGFIHRAVKASHILI---SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
+ + Y H HR +K + L S + L F P K+ T Y
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPY- 173
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGAT 235
++SP+VLE Y D +S G+ L G PF+ PT ++ K+ T
Sbjct: 174 --YVSPQVLE---GLYGPECDEWSAGVMMYVLLCGYPPFS-APTDXEVMLKIREGT 223
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 18/236 (7%)
Query: 353 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIV 412
T ++ Y + + +G+ + V ++ K T A KK + + ED+ EI
Sbjct: 3 TKGDINQYYTLENTIGR--GSWGEVKIAVQKGTRIRRAAKK--IPKYFVEDVDRFKQEIE 58
Query: 413 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 472
M+ L HPNII +F D TD++LV L G + + F E I++DVL
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVL 116
Query: 473 NGLEYIHGKGFIHRAVKASHILI---SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
+ + Y H HR +K + L S + L F P K+ T Y
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKVGTPY- 173
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGAT 585
++SP+VLE Y D +S G+ L G PF+ PT ++ K+ T
Sbjct: 174 --YVSPQVLE---GLYGPECDEWSAGVMMYVLLCGYPPFS-APTDXEVMLKIREGT 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 13/237 (5%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
M T +Y++ LG+ S V K Q A K N +++ D + L E
Sbjct: 23 MATCTRFTDDYQLFEELGK--GAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLERE 80
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
R L+HPNI+ S + +LV L+ G + I A + E H +
Sbjct: 81 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS--EADASHCIHQ 138
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTA 177
+L + +IH +HR +K ++L++ K L+ ++ F +
Sbjct: 139 ILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPG 198
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
Y LSPEVL + D Y + DI++ G+ L G PF + + + AGA
Sbjct: 199 Y----LSPEVLRK--DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGA 249
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 13/228 (5%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y++ LG+ S V K Q A K N +++ D + L E R L+H
Sbjct: 32 DYQLFEELGK--GAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNI+ S + +LV L+ G + I A + E H + +L + +IH
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS--EADASHCIHQILESVNHIH 147
Query: 480 GKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
+HR +K ++L++ K L+ ++ F + Y LSPE
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGY----LSPE 203
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
VL + D Y + DI++ G+ L G PF + + + AGA
Sbjct: 204 VLRK--DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGA 249
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD------EDLKSLHHEIVCM 64
Y++C ++G+ S V ++ T Q AVK ++ + T EDLK E
Sbjct: 26 YELCEVIGK--GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REASIC 80
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLM-GFGSCKDLI-NAHFNFGLPELVICHILQDVL 122
L+HP+I+ + ++ L++V M G C +++ A F E V H ++ +L
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 123 NGLEYIHGKGFIHRAVKASHILIS---HNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L Y H IHR VK +L++ ++ L G + L
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG----LVAGGRVGT 196
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 226
++++PEV+++ + Y + D++ G+ L +G +PF T L
Sbjct: 197 PHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF 241
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD------EDLKSLHHEIVCM 414
Y++C ++G+ S V ++ T Q AVK ++ + T EDLK E
Sbjct: 26 YELCEVIGK--GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REASIC 80
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLM-GFGSCKDLI-NAHFNFGLPELVICHILQDVL 472
L+HP+I+ + ++ L++V M G C +++ A F E V H ++ +L
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 473 NGLEYIHGKGFIHRAVKASHILIS---HNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L Y H IHR VK +L++ ++ L G + L
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG----LVAGGRVGT 196
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 576
++++PEV+++ + Y + D++ G+ L +G +PF T L
Sbjct: 197 PHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF 241
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 5 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
+++ Y +LG S V L++ K T +L+A+K + + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVL 70
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 124
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 125 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 180
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 355 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
+++ Y +LG S V L++ K T +L+A+K + + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVL 70
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 474
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 475 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 530
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 5 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
+++ Y +LG S V L++ K T +L+A+K + + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVL 70
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 124
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 125 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 180
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 355 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
+++ Y +LG S V L++ K T +L+A+K + + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVL 70
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 474
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 475 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 530
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 9/213 (4%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE-DLKSLHHEIVCMRHLRHPNIICYISSFL 80
N SV +++ + I V L + T++ D + + E M L +P I+ I
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VC 405
Query: 81 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
A L LV + G G + +P + +L V G++Y+ K F+HR + A
Sbjct: 406 QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA 464
Query: 141 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 200
++L+ + A +S + + + L W +PE + N + RSD
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECI--NFRKFSSRSD 521
Query: 201 IYSVGISCCE-LANGTVPFAET--PTTLMLIEK 230
++S G++ E L+ G P+ + P + IE+
Sbjct: 522 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 9/213 (4%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE-DLKSLHHEIVCMRHLRHPNIICYISSFL 430
N SV +++ + I V L + T++ D + + E M L +P I+ I
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VC 405
Query: 431 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
A L LV + G G + +P + +L V G++Y+ K F+HR + A
Sbjct: 406 QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA 464
Query: 491 SHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSD 550
++L+ + A +S + + + L W +PE + N + RSD
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECI--NFRKFSSRSD 521
Query: 551 IYSVGISCCE-LANGTVPFAET--PTTLMLIEK 580
++S G++ E L+ G P+ + P + IE+
Sbjct: 522 VWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 201
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 201
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 36/198 (18%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+AVKK + K + E+V ++ + H NII ++ F + D++LV LM
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 110 DANLCQVI-----HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 164
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A + + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 165 ILDFGLARTASTNFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 208
Query: 204 VGISCCELANGTVPFAET 221
VG EL G+V F T
Sbjct: 209 VGCIMGELVKGSVIFQGT 226
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 36/198 (18%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+AVKK + K + E+V ++ + H NII ++ F + D++LV LM
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 110 DANLCQVI-----HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 164
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A + + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 165 ILDFGLARTASTNFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 208
Query: 554 VGISCCELANGTVPFAET 571
VG EL G+V F T
Sbjct: 209 VGCIMGELVKGSVIFQGT 226
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 19 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 70
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 71 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 128
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 179
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 209
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 19 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 70
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 71 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 128
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 179
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 66
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAM 61
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 177
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD--EDLKSLHHEIVCMRH 416
++ + LG+ V L+ ++VT + +AVK ++ R D E++K EI
Sbjct: 7 EDWDLVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAM 61
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
L H N++ + + +L G D I + G+PE ++ G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVV 119
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
Y+HG G HR +K ++L+ +S F ++ L L +++PE
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPE 177
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L++ + + E D++S GI + G +P+
Sbjct: 178 LLKRR-EFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 201
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 201
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 113 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 211
Query: 204 VGISCCELANGTVPFAET 221
VG E+ G V F T
Sbjct: 212 VGCIMGEMIKGGVLFPGT 229
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 113 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 167
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 168 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 211
Query: 554 VGISCCELANGTVPFAET 571
VG E+ G V F T
Sbjct: 212 VGCIMGEMIKGGVLFPGT 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 29 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 86
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 144
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 200
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 201 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 231
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 29 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 86
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 144
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 200
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 201 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 51/259 (19%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S+++ ++LGQ V +++ + ++ A+KK R T+E L ++ E++ + L
Sbjct: 6 SDFEEIAVLGQ--GAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLN 60
Query: 69 HPNIICYISSFLDATDLHLVSPLMGF---------------GSCKDLINAHFNFGLPELV 113
H ++ Y +++L+ + V P+ G+ DLI++ N
Sbjct: 61 HQYVVRYYAAWLERRNF--VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDE 117
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGL-----RYMCPFSPTK 166
+ + +L L YIH +G IHR +K +I I S N K GL R +
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 167 KKVHLFPPSTAYNLN-------WLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTV 216
+ + P ++ NL +++ EV LDG Y+E+ D+YS+GI E+
Sbjct: 178 QNL----PGSSDNLTSAIGTAMYVATEV----LDGTGHYNEKIDMYSLGIIFFEM---IY 226
Query: 217 PFAETPTTLMLIEKLAGAT 235
PF+ + +++KL +
Sbjct: 227 PFSTGMERVNILKKLRSVS 245
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 51/259 (19%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S+++ ++LGQ V +++ + ++ A+KK R T+E L ++ E++ + L
Sbjct: 6 SDFEEIAVLGQ--GAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLN 60
Query: 419 HPNIICYISSFLDATDLHLVSPLMGF---------------GSCKDLINAHFNFGLPELV 463
H ++ Y +++L+ + V P+ G+ DLI++ N
Sbjct: 61 HQYVVRYYAAWLERRNF--VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDE 117
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGL-----RYMCPFSPTK 516
+ + +L L YIH +G IHR +K +I I S N K GL R +
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 517 KKVHLFPPSTAYNLN-------WLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTV 566
+ + P ++ NL +++ EV LDG Y+E+ D+YS+GI E+
Sbjct: 178 QNL----PGSSDNLTSAIGTAMYVATEV----LDGTGHYNEKIDMYSLGIIFFEM---IY 226
Query: 567 PFAETPTTLMLIEKLAGAT 585
PF+ + +++KL +
Sbjct: 227 PFSTGMERVNILKKLRSVS 245
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 50/294 (17%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
+ +VY T +A + ++T + + E ++ L+HPNI+ + S+
Sbjct: 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWES 96
Query: 82 ATD----LHLVSPLMGFGSCKDLINAHFNFGLPEL-VICHILQDVLNGLEYIHGKG--FI 134
+ LV+ L G+ K + F + ++ V+ + +L GL+++H + I
Sbjct: 97 TVKGKKCIVLVTELXTSGTLKTYLK---RFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 135 HRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
HR +K +I I+ + G + K F + + +PE E+
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATL-----KRASFAKAVIGTPEFXAPEXYEEK--- 205
Query: 195 YDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKL-AGATPHLLDCTTYYVDTGQDDG 253
YDE D+Y+ G E A P++E + ++ +G P D
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKV----------- 254
Query: 254 EENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQ 307
A + E I+E C+ ++ D+R +LL HAFF++
Sbjct: 255 ---AIPEVKE-----------------IIEGCIRQNKDERYSIKDLLNHAFFQE 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 19/227 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
+ +VY T +A + ++T + + E ++ L+HPNI+ + S+
Sbjct: 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWES 96
Query: 432 ATD----LHLVSPLMGFGSCKDLINAHFNFGLPEL-VICHILQDVLNGLEYIHGKG--FI 484
+ LV+ L G+ K + F + ++ V+ + +L GL+++H + I
Sbjct: 97 TVKGKKCIVLVTELXTSGTLKTYLK---RFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 485 HRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
HR +K +I I+ + G + K F + + +PE E+
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATL-----KRASFAKAVIGTPEFXAPEXYEEK--- 205
Query: 545 YDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKL-AGATPHLLD 590
YDE D+Y+ G E A P++E + ++ +G P D
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFD 252
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T Q A K N +++ D + L E R L+HPNI+ S + +LV L+
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC-- 152
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 88 GELFEDIVAREYYS--EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 153 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
L+ ++ F + Y LSPEVL + D Y + D+++ G+ L
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGY----LSPEVLRK--DPYGKPVDMWACGVILYIL 199
Query: 212 ANGTVPFAETPTTLMLIEKLAGA 234
G PF + + + AGA
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGA 222
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T Q A K N +++ D + L E R L+HPNI+ S + +LV L+
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC-- 502
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 88 GELFEDIVAREYYS--EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 503 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
L+ ++ F + Y LSPEVL + D Y + D+++ G+ L
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGY----LSPEVLRK--DPYGKPVDMWACGVILYIL 199
Query: 562 ANGTVPFAETPTTLMLIEKLAGA 584
G PF + + + AGA
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGA 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET 221
VG E+ G V F T
Sbjct: 211 VGCIMGEMIKGGVLFPGT 228
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 36/198 (18%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET 571
VG E+ G V F T
Sbjct: 211 VGCIMGEMIKGGVLFPGT 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD------EDLKSLHHEIVCM 64
Y++C ++G+ S V ++ T Q AVK ++ + T EDLK E
Sbjct: 28 YELCEVIGK--GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REASIC 82
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLM-GFGSCKDLI-NAHFNFGLPELVICHILQDVL 122
L+HP+I+ + ++ L++V M G C +++ A F E V H ++ +L
Sbjct: 83 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 123 NGLEYIHGKGFIHRAVKASHILIS---HNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L Y H IHR VK +L++ ++ L G + L
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG----LVAGGRVGT 198
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 226
++++PEV+++ + Y + D++ G+ L +G +PF T L
Sbjct: 199 PHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF 243
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD------EDLKSLHHEIVCM 414
Y++C ++G+ S V ++ T Q AVK ++ + T EDLK E
Sbjct: 28 YELCEVIGK--GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REASIC 82
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLM-GFGSCKDLI-NAHFNFGLPELVICHILQDVL 472
L+HP+I+ + ++ L++V M G C +++ A F E V H ++ +L
Sbjct: 83 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 473 NGLEYIHGKGFIHRAVKASHILIS---HNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L Y H IHR VK +L++ ++ L G + L
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG----LVAGGRVGT 198
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 576
++++PEV+++ + Y + D++ G+ L +G +PF T L
Sbjct: 199 PHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLF 243
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T Q A K N +++ D + L E R L+HPNI+ S + +LV L+
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC-- 152
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 88 GELFEDIVAREYYS--EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 153 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
L+ ++ F + Y LSPEVL + D Y + D+++ G+ L
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGY----LSPEVLRK--DPYGKPVDMWACGVILYIL 199
Query: 212 ANGTVPFAETPTTLMLIEKLAGA 234
G PF + + + AGA
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGA 222
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T Q A K N +++ D + L E R L+HPNI+ S + +LV L+
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC-- 502
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 88 GELFEDIVAREYYS--EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 503 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
L+ ++ F + Y LSPEVL + D Y + D+++ G+ L
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGY----LSPEVLRK--DPYGKPVDMWACGVILYIL 199
Query: 562 ANGTVPFAETPTTLMLIEKLAGA 584
G PF + + + AGA
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGA 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 29/281 (10%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
+ A+KK L++ DE + S EI ++ L+H NI+ L LV +
Sbjct: 26 GETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD- 83
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
K L++ GL + L +LNG+ Y H + +HR +K ++LI+ G+ ++
Sbjct: 84 QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
Query: 155 GLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 213
F P +K H L + +P+VL Y DI+SVG E+ N
Sbjct: 143 DFGLARAFGIPVRKYTH-----EVVTLWYRAPDVL-MGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 214 GT--VPFAETPTTLMLIEKLAGA-----TPHLLDCTTYYVDTGQDDGEENACSYISEQQT 266
G P LM I ++ G P++ + Y + N Y
Sbjct: 197 GAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY---------DPNFTVYEPLPWE 247
Query: 267 QVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQ 307
L + +S ++ L D ++R A L+HA+FK+
Sbjct: 248 SFL--KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
+ A+KK L++ DE + S EI ++ L+H NI+ L LV +
Sbjct: 26 GETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD- 83
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
K L++ GL + L +LNG+ Y H + +HR +K ++LI+ G+ ++
Sbjct: 84 QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA 142
Query: 505 GLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 563
F P +K H L + +P+VL Y DI+SVG E+ N
Sbjct: 143 DFGLARAFGIPVRKYTH-----EVVTLWYRAPDVL-MGSKKYSTTIDIWSVGCIFAEMVN 196
Query: 564 GT--VPFAETPTTLMLIEKLAGATPH 587
G P LM I ++ G TP+
Sbjct: 197 GAPLFPGVSEADQLMRIFRILG-TPN 221
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 33 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 90
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 148
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 204
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 205 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 235
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 33 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 90
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 148
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 204
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 205 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 14 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 71
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 129
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 185
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 186 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 216
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 14 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 71
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 129
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 185
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 186 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPLM 92
T +++AVK D + EI +R L H +II Y D + L LV +
Sbjct: 42 TGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
GS +D + H + GL +L++ Q + G+ Y+H + +IHR + A ++L+ ++
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLL--FAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVK 157
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL P +V S + W +PE L++ Y SD++S G++ E
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKEYKFYY--ASDVWSFGVTLYE 212
Query: 211 LANGTVPFAETPTTLMLIEKLAGATPHLLDCT 242
L PT + + +A +L T
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPLM 442
T +++AVK D + EI +R L H +II Y D + L LV +
Sbjct: 42 TGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
GS +D + H + GL +L++ Q + G+ Y+H + +IHR + A ++L+ ++
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLL--FAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVK 157
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL P +V S + W +PE L++ Y SD++S G++ E
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKEYKFYY--ASDVWSFGVTLYE 212
Query: 561 LANGTVPFAETPTTLMLIEKLAGATPHLLDCT 592
L PT + + +A +L T
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ +RH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKIRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ +RH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKIRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 53/295 (17%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
VG E+ G V F T +IE+L +P + V T EN Y
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV----ENRPKY 266
Query: 261 ISEQQTQVLTSRKF-SDSFHSIVELCLSRDV---------DKRPLACNLLQHAFF 305
++ F +DS H+ ++ +RD+ KR LQH +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLL 589
VG E+ G V F T +IE+L +P +
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 23 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 74
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 75 LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVERMNY 132
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP------IKWTAPEA--- 183
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 23 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 74
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 75 LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVERMNY 132
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP------IKWTAPEA--- 183
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 16 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 67
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + + +V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 68 LYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 125
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP------IKWTAPEA--- 176
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 206
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 16 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 67
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + + +V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 68 LYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 125
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP------IKWTAPEA--- 176
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 54 LKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLV--------SPLMGFGSCKDLINAHF 105
++ ++ EI ++ L HPN++ + D + HL P+M + K L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 106 NFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPT 165
F QD++ G+EY+H + IHR +K S++L+ +G ++ F
Sbjct: 140 RF---------YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--- 187
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS-DIYSVGISCCELANGTVPFAE 220
K +T +++PE L + + ++ D++++G++ G PF +
Sbjct: 188 -KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 404 LKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLV--------SPLMGFGSCKDLINAHF 455
++ ++ EI ++ L HPN++ + D + HL P+M + K L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 456 NFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPT 515
F QD++ G+EY+H + IHR +K S++L+ +G ++ F
Sbjct: 140 RF---------YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--- 187
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS-DIYSVGISCCELANGTVPFAE 570
K +T +++PE L + + ++ D++++G++ G PF +
Sbjct: 188 -KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 13/231 (5%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHH 59
M T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 4 MTTPSHLSDRYELGEILG--FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 60 EIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPELVIC 115
E L HP I+ ++ T ++V + + +D+++ P+ I
Sbjct: 62 EAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAI- 119
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
++ D L + H G IHR VK ++I+IS + + + V +
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-A 178
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 225
+LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 179 VIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 13/234 (5%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-S 406
S + T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 1 GSHMTTPSHLSDRYELGEILG--FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR 58
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPEL 462
E L HP I+ ++ T ++V + + +D+++ P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKR 117
Query: 463 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 522
I ++ D L + H G IHR VK ++I+IS + + + V
Sbjct: 118 AI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 575
+ +LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 177 A-AVIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPLM 92
T +++AVK D + EI +R L H +II Y D + L LV +
Sbjct: 42 TGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 152
GS +D + H + GL +L++ Q + G+ Y+H + +IHR + A ++L+ ++
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLL--FAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVK 157
Query: 153 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
+ GL P +V S + W +PE L++ Y SD++S G++ E
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKEYKFYY--ASDVWSFGVTLYE 212
Query: 211 LANGTVPFAETPTTLMLIEKLAGATPHLLDCT 242
L PT + + +A +L T
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPLM 442
T +++AVK D + EI +R L H +II Y D + L LV +
Sbjct: 42 TGEMVAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC 502
GS +D + H + GL +L++ Q + G+ Y+H + +IHR + A ++L+ ++
Sbjct: 101 PLGSLRDYLPRH-SIGLAQLLL--FAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVK 157
Query: 503 LS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
+ GL P +V S + W +PE L++ Y SD++S G++ E
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKEYKFYY--ASDVWSFGVTLYE 212
Query: 561 LANGTVPFAETPTTLMLIEKLAGATPHLLDCT 592
L PT + + +A +L T
Sbjct: 213 LLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 32 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 89
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 147
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 203
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 204 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 192 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 243
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 244 LYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 301
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 353
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 354 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 192 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 243
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 244 LYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 301
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 353
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 354 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 382
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHLR 68
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 36 DFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 93
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HP + +F D L+ G I +F E ++++ LEY+
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYL 151
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSPE 186
HGKG IHR +K +IL++ + ++ SP K + + F + Y +SPE
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSPE 207
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L + + SD++++G +L G PF
Sbjct: 208 LLTEK--SACKSSDLWALGCIIYQLVAGLPPF 237
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHLR 418
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 36 DFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 93
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HP + +F D L+ G I +F E ++++ LEY+
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYL 151
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSPE 536
HGKG IHR +K +IL++ + ++ SP K + + F + Y +SPE
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSPE 207
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L + + SD++++G +L G PF
Sbjct: 208 LLTEK--SACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR + A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR + A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 275 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 326
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 327 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 384
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 436
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 437 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 465
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 275 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 326
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 327 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 384
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEAA-- 436
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 437 -LYGRFTIKSDVWSFGILLTELTTKGRVPY 465
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHH 59
M T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 4 MTTPSHLSDRYELGEILG--FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 60 EIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPELVIC 115
E L HP I+ + T ++V + + +D+++ P+ I
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAI- 119
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
++ D L + H G IHR VK ++I+IS + + + V +
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-A 178
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 225
+LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 179 VIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-S 406
S + T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 1 GSHMTTPSHLSDRYELGEILG--FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR 58
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPEL 462
E L HP I+ + T ++V + + +D+++ P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKR 117
Query: 463 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 522
I ++ D L + H G IHR VK ++I+IS + + + V
Sbjct: 118 AI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 575
+ +LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 177 A-AVIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 23 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 74
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 75 LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVERMNY 132
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 183
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 23 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 74
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M GS D + LP+LV + + +G+ Y+ +
Sbjct: 75 LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVERMNY 132
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 183
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ GF+HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGFVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ GF+HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGFVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 12/223 (5%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHH 59
M T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 4 MTTPSHLSDRYELGEILG--FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 60 EIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPELVIC 115
E L HP I+ + T ++V + + +D+++ P+ I
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAI- 119
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
++ D L + H G IHR VK ++I+IS + + + V +
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-A 178
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+LSPE + D D RSD+YS+G E+ G PF
Sbjct: 179 VIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 12/226 (5%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-S 406
S + T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 1 GSHMTTPSHLSDRYELGEILG--FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR 58
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPEL 462
E L HP I+ + T ++V + + +D+++ P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKR 117
Query: 463 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 522
I ++ D L + H G IHR VK ++I+IS + + + V
Sbjct: 118 AI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ +LSPE + D D RSD+YS+G E+ G PF
Sbjct: 177 A-AVIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 53/295 (17%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
VG E+ G V F T +IE+L +P + V T EN Y
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV----ENRPKY 266
Query: 261 ISEQQTQVLTSRKF-SDSFHSIVELCLSRDV---------DKRPLACNLLQHAFF 305
++ F +DS H+ ++ +RD+ KR LQH +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
+ +I + + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 D-ANLSQVIQMELDHER----MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLL 589
VG E+ G V F T +IE+L +P +
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 94/250 (37%), Gaps = 46/250 (18%)
Query: 52 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP- 110
E + E+ M +L HPNI+ + + +M F C DL + + P
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM-----VMEFVPCGDLYHRLLDKAHPI 119
Query: 111 -ELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILIS---HNGKACLSGLRYMCPFSP 164
V ++ D+ G+EY+ + +HR +++ +I + N C + FS
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK----VADFSL 175
Query: 165 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT 224
+++ VH N W++PE + + Y E++D YS + + G PF
Sbjct: 176 SQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF------ 228
Query: 225 LMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVEL 284
D +Y G+ + I E+ + +++EL
Sbjct: 229 ---------------DEYSY--------GKIKFINMIREEGLRPTIPEDCPPRLRNVIEL 265
Query: 285 CLSRDVDKRP 294
C S D KRP
Sbjct: 266 CWSGDPKKRP 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 402 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP- 460
E + E+ M +L HPNI+ + + +M F C DL + + P
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM-----VMEFVPCGDLYHRLLDKAHPI 119
Query: 461 -ELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILIS---HNGKACLSGLRYMCPFSP 514
V ++ D+ G+EY+ + +HR +++ +I + N C + FS
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK----VADFSL 175
Query: 515 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+++ VH N W++PE + + Y E++D YS + + G PF E
Sbjct: 176 SQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHH 59
M T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 4 MTTPSHLSDRYELGEILG--FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRR 61
Query: 60 EIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPELVIC 115
E L HP I+ + T ++V + + +D+++ P+ I
Sbjct: 62 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAI- 119
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
++ D L + H G IHR VK ++I+IS + + + V +
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-A 178
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 225
+LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 179 VIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-S 406
S + T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 1 GSHMTTPSHLSDRYELGEILG--FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR 58
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPEL 462
E L HP I+ + T ++V + + +D+++ P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKR 117
Query: 463 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 522
I ++ D L + H G IHR VK ++I+IS + + + V
Sbjct: 118 AI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 176
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 575
+ +LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 177 A-AVIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHN--GKACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHN--GKACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V M GS D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 13/231 (5%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-SLHH 59
M T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 21 MTTPSHLSDRYELGEILG--FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRR 78
Query: 60 EIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPELVIC 115
E L HP I+ + T ++V + + +D+++ P+ I
Sbjct: 79 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKRAI- 136
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
++ D L + H G IHR VK ++I+IS + + + V +
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA-A 195
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 225
+LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 196 VIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 97/234 (41%), Gaps = 13/234 (5%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLK-S 406
S + T ++ Y++ ILG F +S V+L++ ++ +AVK D D
Sbjct: 18 GSHMTTPSHLSDRYELGEILG--FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR 75
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDL----HLVSPLMGFGSCKDLINAHFNFGLPEL 462
E L HP I+ + T ++V + + +D+++ P+
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-TPKR 134
Query: 463 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 522
I ++ D L + H G IHR VK ++I+IS + + + V
Sbjct: 135 AI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT 193
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-AETPTTL 575
+ +LSPE + D D RSD+YS+G E+ G PF ++P ++
Sbjct: 194 A-AVIGTAQYLSPE--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 108/262 (41%), Gaps = 55/262 (20%)
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINA--HFNFGLPELVICHILQDVLNGLE 126
H N++ I F + +LV M GS I+ HFN EL ++QDV + L+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEASVVVQDVASALD 125
Query: 127 YIHGKGFIHRAVKASHILISHNGK---------ACLSGLRYMCPFSPTKKKVHLFPPSTA 177
++H KG HR +K +IL H + SG++ SP L P +A
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 178 YNLNWLSPEVLE---QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+++PEV+E + YD+R D++S+G+ +L L+G
Sbjct: 186 ---EYMAPEVVEAFSEEASIYDKRCDLWSLGV-------------------ILYILLSGY 223
Query: 235 TPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKF----SDSFH------SIVEL 284
P + C + D G D GE AC + + K+ D H ++
Sbjct: 224 PPFVGRCGS---DCGWDRGE--ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK 278
Query: 285 CLSRDVDKRPLACNLLQHAFFK 306
L RD +R A +LQH + +
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQ 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 21/164 (12%)
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINA--HFNFGLPELVICHILQDVLNGLE 476
H N++ I F + +LV M GS I+ HFN EL ++QDV + L+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEASVVVQDVASALD 125
Query: 477 YIHGKGFIHRAVKASHILISHNGK---------ACLSGLRYMCPFSPTKKKVHLFPPSTA 527
++H KG HR +K +IL H + SG++ SP L P +A
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 528 YNLNWLSPEVLE---QNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PEV+E + YD+R D++S+G+ L +G PF
Sbjct: 186 ---EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 47 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 106 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 154
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 212
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 213 EVMSYGERPYWE 224
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 47 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 106 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 154
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 212
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 213 EVMSYGERPYWE 224
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 109/262 (41%), Gaps = 55/262 (20%)
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINA--HFNFGLPELVICHILQDVLNGLE 126
H N++ I F + +LV M GS I+ HFN EL ++QDV + L+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEASVVVQDVASALD 125
Query: 127 YIHGKGFIHRAVKASHILISHNG-----KAC----LSGLRYMCPFSPTKKKVHLFPPSTA 177
++H KG HR +K +IL H K C SG++ SP L P +A
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 178 YNLNWLSPEVLE---QNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+++PEV+E + YD+R D++S+G+ +L L+G
Sbjct: 186 ---EYMAPEVVEAFSEEASIYDKRCDLWSLGV-------------------ILYILLSGY 223
Query: 235 TPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKF----SDSFH------SIVEL 284
P + C + D G D GE AC + + K+ D H ++
Sbjct: 224 PPFVGRCGS---DCGWDRGE--ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK 278
Query: 285 CLSRDVDKRPLACNLLQHAFFK 306
L RD +R A +LQH + +
Sbjct: 279 LLVRDAKQRLSAAQVLQHPWVQ 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINA--HFNFGLPELVICHILQDVLNGLE 476
H N++ I F + +LV M GS I+ HFN EL ++QDV + L+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN----ELEASVVVQDVASALD 125
Query: 477 YIHGKGFIHRAVKASHILISHNG-----KAC----LSGLRYMCPFSPTKKKVHLFPPSTA 527
++H KG HR +K +IL H K C SG++ SP L P +A
Sbjct: 126 FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 528 YNLNWLSPEVLE---QNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PEV+E + YD+R D++S+G+ L +G PF
Sbjct: 186 ---EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 47 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 106 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 154
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 212
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 213 EVMSYGERPYWE 224
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 47 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 106 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 154
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 212
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 213 EVMSYGERPYWE 224
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 5 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
+++ Y +LG S V L++ K T +L+A+K + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSMENEIAVL 70
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 124
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 125 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 180
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 355 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
+++ Y +LG S V L++ K T +L+A+K + ++ S+ +EI +
Sbjct: 14 EDIRDIYDFRDVLGT--GAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSMENEIAVL 70
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 474
++HPNI+ + L+L+ L+ G D I + E ++ VL+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY--TERDASRLIFQVLDA 128
Query: 475 LEYIHGKGFIHRAVKASHIL---ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL- 530
++Y+H G +HR +K ++L + + K +S F +K + STA
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD------FGLSKMEDPGSVLSTACGTP 182
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PEVL Q Y + D +S+G+ L G PF
Sbjct: 183 GYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 40/269 (14%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 149 ----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
G A +G +M T + V T Y + +PEV+ GY E DI+SV
Sbjct: 167 ILDFGLARTAGTSFMM----TPEVV------TRY---YRAPEVILGM--GYKENVDIWSV 211
Query: 205 GISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYI 261
G E+ G V F T +IE+L P + V T ++ + A
Sbjct: 212 GCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF 271
Query: 262 SEQQTQVLTSRKFSDSFHSIVELCLSRDV 290
+ VL +DS H+ ++ +RD+
Sbjct: 272 EKLFPDVLFP---ADSEHNALKASQARDL 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 499 ----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
G A +G +M T + V T Y + +PEV+ GY E DI+SV
Sbjct: 167 ILDFGLARTAGTSFMM----TPEVV------TRY---YRAPEVILGM--GYKENVDIWSV 211
Query: 555 GISCCELANGTVPFAET 571
G E+ G V F T
Sbjct: 212 GCIMGEMIKGGVLFPGT 228
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 64 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 123 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 171
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 229
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 230 EVMSYGERPYWE 241
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 64 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 123 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 171
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 229
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 230 EVMSYGERPYWE 241
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 93/250 (37%), Gaps = 46/250 (18%)
Query: 52 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP- 110
E + E+ M +L HPNI+ + + +M F C DL + + P
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM-----VMEFVPCGDLYHRLLDKAHPI 119
Query: 111 -ELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILIS---HNGKACLSGLRYMCPFSP 164
V ++ D+ G+EY+ + +HR +++ +I + N C + F
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK----VADFGT 175
Query: 165 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT 224
+++ VH N W++PE + + Y E++D YS + + G PF
Sbjct: 176 SQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF------ 228
Query: 225 LMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVEL 284
D +Y G+ + I E+ + +++EL
Sbjct: 229 ---------------DEYSY--------GKIKFINMIREEGLRPTIPEDCPPRLRNVIEL 265
Query: 285 CLSRDVDKRP 294
C S D KRP
Sbjct: 266 CWSGDPKKRP 275
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 402 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP- 460
E + E+ M +L HPNI+ + + +M F C DL + + P
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM-----VMEFVPCGDLYHRLLDKAHPI 119
Query: 461 -ELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILIS---HNGKACLSGLRYMCPFSP 514
V ++ D+ G+EY+ + +HR +++ +I + N C + F
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK----VADFGT 175
Query: 515 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+++ VH N W++PE + + Y E++D YS + + G PF E
Sbjct: 176 SQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 45/223 (20%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH---- 86
K ++ N +AVK F L D+ EI ++H N++ +I++ ++L
Sbjct: 33 KAQLMNDFVAVKIFPLQ---DKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELW 89
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH-------GKG----FIH 135
L++ GS D + + + +CH+ + + GL Y+H G+G H
Sbjct: 90 LITAFHDKGSLTDYLKGNI---ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAH 146
Query: 136 RAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN----LNWLSPEVLEQN 191
R K+ ++L+ + A L+ F P K PP + +++PEVLE
Sbjct: 147 RDFKSKNVLLKSDLTAVLADFGLAVRFEPGK------PPGDTHGQVGTRRYMAPEVLEGA 200
Query: 192 LDGYDE---RSDIYSVG------ISCCELANGTV-----PFAE 220
++ + R D+Y++G +S C+ A+G V PF E
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEE 243
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 45/223 (20%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH---- 436
K ++ N +AVK F L D+ EI ++H N++ +I++ ++L
Sbjct: 33 KAQLMNDFVAVKIFPLQ---DKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELW 89
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH-------GKG----FIH 485
L++ GS D + + + +CH+ + + GL Y+H G+G H
Sbjct: 90 LITAFHDKGSLTDYLKGNI---ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAH 146
Query: 486 RAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN----LNWLSPEVLEQN 541
R K+ ++L+ + A L+ F P K PP + +++PEVLE
Sbjct: 147 RDFKSKNVLLKSDLTAVLADFGLAVRFEPGK------PPGDTHGQVGTRRYMAPEVLEGA 200
Query: 542 LDGYDE---RSDIYSVG------ISCCELANGTV-----PFAE 570
++ + R D+Y++G +S C+ A+G V PF E
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEE 243
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 37 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 94
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + F D L+ G I +F E ++++ LEY
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 152
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 208
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 209 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 239
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+V L++ T++ A+K + E+ + + E M L
Sbjct: 37 EDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 94
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + F D L+ G I +F E ++++ LEY
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 152
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 208
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 209 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 53/295 (17%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
++ L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
VG E+ G V F T +IE+L +P + V T EN Y
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV----ENRPKY 266
Query: 261 ISEQQTQVLTSRKF-SDSFHSIVELCLSRDV---------DKRPLACNLLQHAFF 305
++ F +DS H+ ++ +RD+ KR LQH +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
++ L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLL 589
VG E+ G V F T +IE+L +P +
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 67
++K ILG+ + S+ L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 185
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 201
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDED-LKSLHHEIVCMRHL 417
++K ILG+ + S+ L++ T++ A+K + E+ + + E M L
Sbjct: 30 EDFKFGKILGE--GSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 87
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
HP + +F D L+ G I +F E ++++ LEY
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEY 145
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK--KVHLFPPSTAYNLNWLSP 535
+HGKG IHR +K +IL++ + ++ SP K + + F + Y +SP
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY----VSP 201
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
E+L + + SD++++G +L G PF
Sbjct: 202 ELLTEK--SACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 53/295 (17%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
++ L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 204 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSY 260
VG E+ G V F T +IE+L +P + V T EN Y
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV----ENRPKY 266
Query: 261 ISEQQTQVLTSRKF-SDSFHSIVELCLSRDV---------DKRPLACNLLQHAFF 305
++ F +DS H+ ++ +RD+ KR LQH +
Sbjct: 267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
++ L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DAN-----LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLK 166
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E DI+S
Sbjct: 167 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDIWS 210
Query: 554 VGISCCELANGTVPFAET---PTTLMLIEKLAGATPHLL 589
VG E+ G V F T +IE+L +P +
Sbjct: 211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 115/300 (38%), Gaps = 36/300 (12%)
Query: 4 LDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--LDRMTDEDLKSLHH 59
L NV +N+ + S+ G + K V N +AVKK +D T+E +
Sbjct: 11 LKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 70
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI---CH 116
EI +H N++ + D DL LV GS D ++ G P L C
Sbjct: 71 EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD--GTPPLSWHXRCK 128
Query: 117 ILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPP 174
I Q NG+ ++H IHR +K+++IL+ A +S GL
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
+TAY +PE L + +SDIYS G+ E+ G +P + L+ +
Sbjct: 189 TTAY----XAPEALRGEI---TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKEE 240
Query: 235 TPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRP 294
Y+D +D + + ++ +S+ CL +KRP
Sbjct: 241 IEDEEKTIEDYIDKKXNDADSTSV-----------------EAXYSVASQCLHEKKNKRP 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 91/220 (41%), Gaps = 18/220 (8%)
Query: 354 LDNVPSNY--KICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFN--LDRMTDEDLKSLHH 409
L NV +N+ + S+ G + K V N +AVKK +D T+E +
Sbjct: 11 LKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 70
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI---CH 466
EI +H N++ + D DL LV GS D ++ G P L C
Sbjct: 71 EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD--GTPPLSWHXRCK 128
Query: 467 ILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPP 524
I Q NG+ ++H IHR +K+++IL+ A +S GL
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+TAY +PE L + +SDIYS G+ E+ G
Sbjct: 189 TTAY----XAPEALRGEI---TPKSDIYSFGVVLLEIITG 221
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V+ M G D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHN--GKACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V+ M G D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHN--GKACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 48 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 107
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 108 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 206
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 207 VDIWSVGCIMGEMVRHKILF 226
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 48 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 107
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 108 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 206
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 207 VDIWSVGCIMGEMVRHKILF 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 46 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 105
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 106 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 160
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 161 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 204
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 205 VDIWSVGCIMGEMVRHKILF 224
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 46 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 105
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 106 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 160
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 161 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 204
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 205 VDIWSVGCIMGEMVRHKILF 224
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 41 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D++LV+ LMG K L H L IC+ L +
Sbjct: 99 RHENIIG-INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH----LSNDHICYFLYQI 153
Query: 122 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 211
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 212 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 241
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 41 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D++LV+ LMG K L H L IC+ L +
Sbjct: 99 RHENIIG-INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH----LSNDHICYFLYQI 153
Query: 472 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 211
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 212 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 74 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 133 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 181
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 239
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 240 EVMSYGERPYWE 251
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 74 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 133 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 181
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 239
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 240 EVMSYGERPYWE 251
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 85 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 145 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 243
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 244 VDIWSVGCIMGEMVRHKILF 263
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 85 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 145 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 243
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 244 VDIWSVGCIMGEMVRHKILF 263
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 85 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 145 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 243
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 244 VDIWSVGCIMGEMVRHKILF 263
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 85 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 145 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 200 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 243
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 244 VDIWSVGCIMGEMVRHKILF 263
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 48 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 107
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 108 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 206
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 207 VDIWSVGCIMGEMVRHKILF 226
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 48 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 107
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 108 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 162
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 163 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 206
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 207 VDIWSVGCIMGEMVRHKILF 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 100 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 198
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 199 VDIWSVGCIMGEMVRHKILF 218
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 100 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 198
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 199 VDIWSVGCIMGEMVRHKILF 218
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 41 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 100
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 101 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 199
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 200 VDIWSVGCIMGEMVRHKILF 219
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 41 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 100
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 101 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 199
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 200 VDIWSVGCIMGEMVRHKILF 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 93/250 (37%), Gaps = 46/250 (18%)
Query: 52 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP- 110
E + E+ M +L HPNI+ + + +M F C DL + + P
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM-----VMEFVPCGDLYHRLLDKAHPI 119
Query: 111 -ELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILIS---HNGKACLSGLRYMCPFSP 164
V ++ D+ G+EY+ + +HR +++ +I + N C + F
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK----VADFGL 175
Query: 165 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTT 224
+++ VH N W++PE + + Y E++D YS + + G PF
Sbjct: 176 SQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF------ 228
Query: 225 LMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVEL 284
D +Y G+ + I E+ + +++EL
Sbjct: 229 ---------------DEYSY--------GKIKFINMIREEGLRPTIPEDCPPRLRNVIEL 265
Query: 285 CLSRDVDKRP 294
C S D KRP
Sbjct: 266 CWSGDPKKRP 275
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 17/176 (9%)
Query: 402 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP- 460
E + E+ M +L HPNI+ + + +M F C DL + + P
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM-----VMEFVPCGDLYHRLLDKAHPI 119
Query: 461 -ELVICHILQDVLNGLEYIHGKG--FIHRAVKASHILIS---HNGKACLSGLRYMCPFSP 514
V ++ D+ G+EY+ + +HR +++ +I + N C + F
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAK----VADFGL 175
Query: 515 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAE 570
+++ VH N W++PE + + Y E++D YS + + G PF E
Sbjct: 176 SQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 41 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 100
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 101 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 199
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 200 VDIWSVGCIMGEMVRHKILF 219
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 41 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 100
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM C+ + L + ++L +L G++++H G IHR +K S+I++
Sbjct: 101 VMELMDANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 155
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 156 DCTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 199
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 200 VDIWSVGCIMGEMVRHKILF 219
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G++HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGYVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPL 91
T +++AVK L L+S EI +R L H +I+ Y D + + LV
Sbjct: 36 TGEMVAVKA--LKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
+ GS +D + H GL +L++ Q + G+ Y+H + +IHRA+ A ++L+ ++
Sbjct: 94 VPLGSLRDYLPRH-CVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 150
Query: 152 CLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+ GL P +V S + W +PE L++ Y SD++S G++
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKECKFYYA--SDVWSFGVTLY 205
Query: 210 EL 211
EL
Sbjct: 206 EL 207
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPL 441
T +++AVK L L+S EI +R L H +I+ Y D + + LV
Sbjct: 36 TGEMVAVKA--LKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
+ GS +D + H GL +L++ Q + G+ Y+H + +IHRA+ A ++L+ ++
Sbjct: 94 VPLGSLRDYLPRH-CVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 150
Query: 502 CLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+ GL P +V S + W +PE L++ Y SD++S G++
Sbjct: 151 KIGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKECKFYYA--SDVWSFGVTLY 205
Query: 560 EL 561
EL
Sbjct: 206 EL 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPL 91
T +++AVK L L+S EI +R L H +I+ Y D + + LV
Sbjct: 37 TGEMVAVKA--LKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 92 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
+ GS +D + H GL +L++ Q + G+ Y+H + +IHRA+ A ++L+ ++
Sbjct: 95 VPLGSLRDYLPRH-CVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 151
Query: 152 CLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+ GL P +V S + W +PE L++ Y SD++S G++
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKECKFYYA--SDVWSFGVTLY 206
Query: 210 EL 211
EL
Sbjct: 207 EL 208
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHLRHPNIICYISSFLDATD--LHLVSPL 441
T +++AVK L L+S EI +R L H +I+ Y D + + LV
Sbjct: 37 TGEMVAVKA--LKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 442 MGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
+ GS +D + H GL +L++ Q + G+ Y+H + +IHRA+ A ++L+ ++
Sbjct: 95 VPLGSLRDYLPRH-CVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLV 151
Query: 502 CLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+ GL P +V S + W +PE L++ Y SD++S G++
Sbjct: 152 KIGDFGLAKAVPEGHEYYRVREDGDSPVF---WYAPECLKECKFYYA--SDVWSFGVTLY 206
Query: 560 EL 561
EL
Sbjct: 207 EL 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 9 SNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCM 64
N+++ +LG + + V T +L A+K + + K+ H E +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-QKAKTTEHTRTERQVL 112
Query: 65 RHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
H+R P ++ +F T LHL+ + G ++ F E+ I + +++
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY--VGEIVL 170
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN---- 179
LE++H G I+R +K +IL+ NG L+ F + + AY+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-------RAYDFCGT 223
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ +++P+++ G+D+ D +S+G+ EL G PF
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 19/219 (8%)
Query: 359 SNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCM 414
N+++ +LG + + V T +L A+K + + K+ H E +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-QKAKTTEHTRTERQVL 112
Query: 415 RHLRH-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
H+R P ++ +F T LHL+ + G ++ F E+ I + +++
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY--VGEIVL 170
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN---- 529
LE++H G I+R +K +IL+ NG L+ F + + AY+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-------RAYDFCGT 223
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ +++P+++ G+D+ D +S+G+ EL G PF
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y++ LG+ S V + Q A K N +++ D + L E R L+
Sbjct: 22 SMYQLFEELGK--GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLK 79
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HPNI+ S + +L+ L+ G + I A + E H +Q +L + +
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS--EADASHCIQQILEAVLHC 137
Query: 129 HGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
H G +HR +K ++L++ K L+ ++ F + Y LSP
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY----LSP 193
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 234
EVL + D Y + D+++ G+ L G PF + + + AGA
Sbjct: 194 EVLRK--DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGA 240
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y++ LG+ S V + Q A K N +++ D + L E R L+
Sbjct: 22 SMYQLFEELGK--GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLK 79
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HPNI+ S + +L+ L+ G + I A + E H +Q +L + +
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS--EADASHCIQQILEAVLHC 137
Query: 479 HGKGFIHRAVKASHILISHNGKAC---LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
H G +HR +K ++L++ K L+ ++ F + Y LSP
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGY----LSP 193
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGA 584
EVL + D Y + D+++ G+ L G PF + + + AGA
Sbjct: 194 EVLRK--DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGA 240
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 24 LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 83
S V L++ K T +L AVK + ++ S+ +EI +R ++H NI+ +
Sbjct: 35 FSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYESPN 93
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 143
L+LV L+ G D I + E +++ VL+ + Y+H G +HR +K ++
Sbjct: 94 HLYLVMQLVSGGELFDRIVEKGFY--TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 144 L-ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSPEVLEQNLDGYDERSDI 201
L S + ++ + + F +K + STA +++PEVL Q Y + D
Sbjct: 152 LYYSQDEESKI----MISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQK--PYSKAVDC 205
Query: 202 YSVGISCCELANGTVPF 218
+S+G+ L G PF
Sbjct: 206 WSIGVIAYILLCGYPPF 222
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 374 LSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT 433
S V L++ K T +L AVK + ++ S+ +EI +R ++H NI+ +
Sbjct: 35 FSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYESPN 93
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 493
L+LV L+ G D I + E +++ VL+ + Y+H G +HR +K ++
Sbjct: 94 HLYLVMQLVSGGELFDRIVEKGFY--TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 494 L-ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSPEVLEQNLDGYDERSDI 551
L S + ++ + + F +K + STA +++PEVL Q Y + D
Sbjct: 152 LYYSQDEESKI----MISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQK--PYSKAVDC 205
Query: 552 YSVGISCCELANGTVPF 568
+S+G+ L G PF
Sbjct: 206 WSIGVIAYILLCGYPPF 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 6 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH--HEIVC 63
N+ S++++ S+LG+ V + HK T +++A+KK D+ L +L EI
Sbjct: 8 NISSDFQLKSLLGE--GAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKI 62
Query: 64 MRHLRHPNIICYIS-----SFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 118
++H +H NII + SF + +++++ LM DL L + I + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFI 118
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFS------PTKKKVH 170
L ++ +HG IHR +K S++LI+ N K C GL + S PT ++
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 171 LFPPSTAYNLNWL-SPEVLEQNLDGYDERSDIYSVGISCCE--LANGTVPFAETPTTLML 227
+ + W +PEV+ + Y D++S G E L P + L+L
Sbjct: 179 M---TEXVATRWYRAPEVMLTSAK-YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 228 IEKLAGATPH 237
I + G TPH
Sbjct: 235 IFGIIG-TPH 243
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 356 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH--HEIVC 413
N+ S++++ S+LG+ V + HK T +++A+KK D+ L +L EI
Sbjct: 8 NISSDFQLKSLLGE--GAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKI 62
Query: 414 MRHLRHPNIICYIS-----SFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 468
++H +H NII + SF + +++++ LM DL L + I + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFI 118
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFS------PTKKKVH 520
L ++ +HG IHR +K S++LI+ N K C GL + S PT ++
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 521 LFPPSTAYNLNWL-SPEVLEQNLDGYDERSDIYSVGISCCE--LANGTVPFAETPTTLML 577
+ + W +PEV+ + Y D++S G E L P + L+L
Sbjct: 179 M---TEXVATRWYRAPEVMLTSAK-YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 578 IEKLAGATPH 587
I + G TPH
Sbjct: 235 IFGIIG-TPH 243
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S+++ ++LGQ V +++ + ++ A+KK R T+E L ++ E++ + L
Sbjct: 6 SDFEEIAVLGQ--GAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLN 60
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFG---------------SCKDLINAHFNFGLPELV 113
H ++ Y +++L+ + V P+ + DLI++ N
Sbjct: 61 HQYVVRYYAAWLERRNF--VKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQRDE 117
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHL 171
+ + +L L YIH +G IHR +K +I I S N K GL S K+
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 172 FP-PSTAYNLN-------WLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPFAE 220
P ++ NL +++ EV LDG Y+E+ D+YS+GI E+ PF+
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEV----LDGTGHYNEKIDMYSLGIIFFEM---IYPFST 230
Query: 221 TPTTLMLIEKLAGAT 235
+ +++KL +
Sbjct: 231 GMERVNILKKLRSVS 245
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S+++ ++LGQ V +++ + ++ A+KK R T+E L ++ E++ + L
Sbjct: 6 SDFEEIAVLGQ--GAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLN 60
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFG---------------SCKDLINAHFNFGLPELV 463
H ++ Y +++L+ + V P+ + DLI++ N
Sbjct: 61 HQYVVRYYAAWLERRNF--VKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE-NLNQQRDE 117
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHL 521
+ + +L L YIH +G IHR +K +I I S N K GL S K+
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 522 FP-PSTAYNLN-------WLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPFAE 570
P ++ NL +++ EV LDG Y+E+ D+YS+GI E+ PF+
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEV----LDGTGHYNEKIDMYSLGIIFFEM---IYPFST 230
Query: 571 TPTTLMLIEKLAGAT 585
+ +++KL +
Sbjct: 231 GMERVNILKKLRSVS 245
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 34/251 (13%)
Query: 6 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH--HEIVC 63
N+ S++++ S+LG+ V + HK T +++A+KK D+ L +L EI
Sbjct: 8 NISSDFQLKSLLGE--GAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKI 62
Query: 64 MRHLRHPNIICYIS-----SFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 118
++H +H NII + SF + +++++ LM DL L + I + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFI 118
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFS------PTKKKVH 170
L ++ +HG IHR +K S++LI+ N K C GL + S PT ++
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 171 LFPPSTAY-NLNWL-SPEVLEQNLDGYDERSDIYSVGISCCE--LANGTVPFAETPTTLM 226
+ T Y W +PEV+ + Y D++S G E L P + L+
Sbjct: 179 M----TEYVATRWYRAPEVMLTSAK-YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 227 LIEKLAGATPH 237
LI + G TPH
Sbjct: 234 LIFGIIG-TPH 243
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 34/251 (13%)
Query: 356 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH--HEIVC 413
N+ S++++ S+LG+ V + HK T +++A+KK D+ L +L EI
Sbjct: 8 NISSDFQLKSLLGE--GAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKI 62
Query: 414 MRHLRHPNIICYIS-----SFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 468
++H +H NII + SF + +++++ LM DL L + I + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFI 118
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFS------PTKKKVH 520
L ++ +HG IHR +K S++LI+ N K C GL + S PT ++
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 521 LFPPSTAY-NLNWL-SPEVLEQNLDGYDERSDIYSVGISCCE--LANGTVPFAETPTTLM 576
+ T Y W +PEV+ + Y D++S G E L P + L+
Sbjct: 179 M----TEYVATRWYRAPEVMLTSAK-YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 577 LIEKLAGATPH 587
LI + G TPH
Sbjct: 234 LIFGIIG-TPH 243
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 17 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 75
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 76 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 133
+ + + +++V M G D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 134 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 190
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 191 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 218
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 367 LGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY 425
LGQ CF V++ T + +A+K M+ E + E M+ LRH ++
Sbjct: 26 LGQGCFGE---VWMGTWNGTTR-VAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLV-Q 77
Query: 426 ISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLPELVICHILQDVLNGLEYIHGKGF 483
+ + + +++V M G D + LP+LV + + +G+ Y+ +
Sbjct: 78 LYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVERMNY 135
Query: 484 IHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ 540
+HR ++A++IL+ N K GL R + T ++ FP + W +PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP------IKWTAPEA--- 186
Query: 541 NLDG-YDERSDIYSVGISCCEL-ANGTVPF 568
L G + +SD++S GI EL G VP+
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 94
+AVK F+ DE E+ LRH NI+ +I+S + +T L L++
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 95 GSCKDLINAHFNFGLPELVIC-HILQDVLNGLEYIH-------GKGFI-HRAVKASHILI 145
GS D + + V C I+ + +GL ++H GK I HR +K+ +IL+
Sbjct: 91 GSLYD----YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 146 SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--ERSDI 201
NG+ C++ L S + ++ + +++PEVL++ + D +D +R DI
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206
Query: 202 YSVGISCCELANGTV 216
++ G+ E+A V
Sbjct: 207 WAFGLVLWEVARRMV 221
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 444
+AVK F+ DE E+ LRH NI+ +I+S + +T L L++
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 445 GSCKDLINAHFNFGLPELVIC-HILQDVLNGLEYIH-------GKGFI-HRAVKASHILI 495
GS D + + V C I+ + +GL ++H GK I HR +K+ +IL+
Sbjct: 91 GSLYD----YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 496 SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--ERSDI 551
NG+ C++ L S + ++ + +++PEVL++ + D +D +R DI
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206
Query: 552 YSVGISCCELANGTV 566
++ G+ E+A V
Sbjct: 207 WAFGLVLWEVARRMV 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 31/282 (10%)
Query: 5 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
D + +++ S LG+ ++ VY K K T + A+K L + D+ K + EI +
Sbjct: 49 DALSDFFEVESELGRGATSI--VYRCKQKGTQKPYALK--VLKKTVDK--KIVRTEIGVL 102
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 124
L HPNII F T++ LV L+ G D I + E ++ +L
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS--ERDAADAVKQILEA 160
Query: 125 LEYIHGKGFIHRAVKASHILISHNG-----KACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
+ Y+H G +HR +K ++L + K GL + K V P
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP------ 214
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 239
+ +PE+L Y D++SVGI L G PF + + + +L
Sbjct: 215 -GYCAPEILRGC--AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR-------IL 264
Query: 240 DCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSI 281
+C Y++ D+ NA + ++ VL +K +F ++
Sbjct: 265 NCEYYFISPWWDEVSLNAKDLV--RKLIVLDPKKRLTTFQAL 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 29/258 (11%)
Query: 355 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
D + +++ S LG+ ++ VY K K T + A+K L + D+ K + EI +
Sbjct: 49 DALSDFFEVESELGRGATSI--VYRCKQKGTQKPYALK--VLKKTVDK--KIVRTEIGVL 102
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 474
L HPNII F T++ LV L+ G D I + E ++ +L
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS--ERDAADAVKQILEA 160
Query: 475 LEYIHGKGFIHRAVKASHILISHNG-----KACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
+ Y+H G +HR +K ++L + K GL + K V P
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP------ 214
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLL 589
+ +PE+L Y D++SVGI L G PF + + + +L
Sbjct: 215 -GYCAPEILRGC--AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR-------IL 264
Query: 590 DCTTYYVDTGQDDGEENA 607
+C Y++ D+ NA
Sbjct: 265 NCEYYFISPWWDEVSLNA 282
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 94
+AVK F+ DE E+ LRH NI+ +I+S + +T L L++
Sbjct: 63 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 119
Query: 95 GSCKDLINAHFNFGLPELVIC-HILQDVLNGLEYIH-------GKGFI-HRAVKASHILI 145
GS D + + V C I+ + +GL ++H GK I HR +K+ +IL+
Sbjct: 120 GSLYD----YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 175
Query: 146 SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--ERSDI 201
NG+ C++ L S + ++ + +++PEVL++ + D +D +R DI
Sbjct: 176 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 235
Query: 202 YSVGISCCELANGTV 216
++ G+ E+A V
Sbjct: 236 WAFGLVLWEVARRMV 250
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 444
+AVK F+ DE E+ LRH NI+ +I+S + +T L L++
Sbjct: 63 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 119
Query: 445 GSCKDLINAHFNFGLPELVIC-HILQDVLNGLEYIH-------GKGFI-HRAVKASHILI 495
GS D + + V C I+ + +GL ++H GK I HR +K+ +IL+
Sbjct: 120 GSLYD----YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 175
Query: 496 SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--ERSDI 551
NG+ C++ L S + ++ + +++PEVL++ + D +D +R DI
Sbjct: 176 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 235
Query: 552 YSVGISCCELANGTV 566
++ G+ E+A V
Sbjct: 236 WAFGLVLWEVARRMV 250
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 94
+AVK F+ DE E+ LRH NI+ +I+S + +T L L++
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 95 GSCKDLINAHFNFGLPELVIC-HILQDVLNGLEYIH-------GKGFI-HRAVKASHILI 145
GS D + + V C I+ + +GL ++H GK I HR +K+ +IL+
Sbjct: 91 GSLYD----YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 146 SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--ERSDI 201
NG+ C++ L S + ++ + +++PEVL++ + D +D +R DI
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206
Query: 202 YSVGISCCELANGTV 216
++ G+ E+A V
Sbjct: 207 WAFGLVLWEVARRMV 221
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 444
+AVK F+ DE E+ LRH NI+ +I+S + +T L L++
Sbjct: 34 VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM 90
Query: 445 GSCKDLINAHFNFGLPELVIC-HILQDVLNGLEYIH-------GKGFI-HRAVKASHILI 495
GS D + + V C I+ + +GL ++H GK I HR +K+ +IL+
Sbjct: 91 GSLYD----YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 496 SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--ERSDI 551
NG+ C++ L S + ++ + +++PEVL++ + D +D +R DI
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206
Query: 552 YSVGISCCELANGTV 566
++ G+ E+A V
Sbjct: 207 WAFGLVLWEVARRMV 221
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 23/224 (10%)
Query: 5 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE----DLKSLHHE 60
++V +Y++ LG + V + K T + A K R++ + + E
Sbjct: 8 EDVEDHYEMGEELGS--GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 65
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+ +R +RHPNII F + TD+ L+ L+ G D + + L E L+
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQ 123
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKKVHLFPP 174
+L+G+ Y+H K H +K +I++ K G+ + K + P
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP- 182
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+++PE++ N + +D++S+G+ L +G PF
Sbjct: 183 ------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 23/224 (10%)
Query: 355 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE----DLKSLHHE 410
++V +Y++ LG + V + K T + A K R++ + + E
Sbjct: 8 EDVEDHYEMGEELGS--GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 65
Query: 411 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 470
+ +R +RHPNII F + TD+ L+ L+ G D + + L E L+
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQ 123
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKKVHLFPP 524
+L+G+ Y+H K H +K +I++ K G+ + K + P
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP- 182
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PE++ N + +D++S+G+ L +G PF
Sbjct: 183 ------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 34/251 (13%)
Query: 6 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH--HEIVC 63
N+ S++++ S+LG+ V + HK T +++A+KK D+ L +L EI
Sbjct: 8 NISSDFQLKSLLGE--GAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKI 62
Query: 64 MRHLRHPNIICYIS-----SFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 118
++H +H NII + SF + +++++ LM DL L + I + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFI 118
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFS------PTKKKVH 170
L ++ +HG IHR +K S++LI+ N K C GL + S PT ++
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 171 L--FPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE--LANGTVPFAETPTTLM 226
+ F + Y +PEV+ + Y D++S G E L P + L+
Sbjct: 179 MVEFVATRWYR----APEVMLTSAK-YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 227 LIEKLAGATPH 237
LI + G TPH
Sbjct: 234 LIFGIIG-TPH 243
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 34/251 (13%)
Query: 356 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH--HEIVC 413
N+ S++++ S+LG+ V + HK T +++A+KK D+ L +L EI
Sbjct: 8 NISSDFQLKSLLGE--GAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRTLREIKI 62
Query: 414 MRHLRHPNIICYIS-----SFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 468
++H +H NII + SF + +++++ LM DL L + I + +
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFI 118
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFS------PTKKKVH 520
L ++ +HG IHR +K S++LI+ N K C GL + S PT ++
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 521 L--FPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE--LANGTVPFAETPTTLM 576
+ F + Y +PEV+ + Y D++S G E L P + L+
Sbjct: 179 MVEFVATRWYR----APEVMLTSAK-YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL 233
Query: 577 LIEKLAGATPH 587
LI + G TPH
Sbjct: 234 LIFGIIG-TPH 243
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 100 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 154
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 155 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 198
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 199 VDIWSVGCIMGEMVRHKILF 218
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 40 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 99
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 100 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 154
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 155 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 198
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 199 VDIWSVGCIMGEMVRHKILF 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 87
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 88 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 147
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 148 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 199 SDIYSVGISCCELANGTVPF 218
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHL 437
V ++ +A+KK + K + E+V M+ + H NII ++ F + D++L
Sbjct: 47 VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 106
Query: 438 VSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH 497
V LM + +I + + ++L +L G++++H G IHR +K S+I++
Sbjct: 107 VMELMD-ANLXQVIQMELDHER----MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 498 N--------GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+ G A +G + M P+ T+ + +PEV+ GY E
Sbjct: 162 DXTLKILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKEN 205
Query: 549 SDIYSVGISCCELANGTVPF 568
DI+SVG E+ + F
Sbjct: 206 VDIWSVGCIMGEMVRHKILF 225
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 48/320 (15%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR---HPNII-----CYISSFLDATD 84
K + +A+K+ + + S E+ +RHL HPN++ C +S T
Sbjct: 34 KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 85 LHLVSPLMGFGSCKDLINAHFNF----GLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
L LV F + + + G+P I ++ +L GL+++H +HR +K
Sbjct: 94 LTLV-----FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKP 148
Query: 141 SHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
+IL++ +G+ L+ GL + F + S L + +PEVL Q+ Y
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF-------QMALTSVVVTLWYRAPEVLLQS--SYATP 199
Query: 199 SDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENAC 258
D++SVG E+ F + +++L +LD G++D +
Sbjct: 200 VDLWSVGCIFAEMFRRKPLFRGSSD----VDQLG----KILDVIGL---PGEEDWPRDVA 248
Query: 259 SYISEQQTQVLTSRKFSDSFHSIVEL-------CLSRDVDKRPLACNLLQHAFFKQTKKC 311
+ Q +++ I EL CL+ + KR A + L H +F+ ++C
Sbjct: 249 --LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 306
Query: 312 SVMLPELLRPALSLNESNVC 331
L L P+ + +E N
Sbjct: 307 KENLDSHLPPSQNTSELNTA 326
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR---HPNII-----CYISSFLDATD 434
K + +A+K+ + + S E+ +RHL HPN++ C +S T
Sbjct: 34 KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 435 LHLVSPLMGFGSCKDLINAHFNF----GLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
L LV F + + + G+P I ++ +L GL+++H +HR +K
Sbjct: 94 LTLV-----FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKP 148
Query: 491 SHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
+IL++ +G+ L+ GL + F + S L + +PEVL Q+ Y
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSF-------QMALTSVVVTLWYRAPEVLLQS--SYATP 199
Query: 549 SDIYSVGISCCEL 561
D++SVG E+
Sbjct: 200 VDLWSVGCIFAEM 212
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHLR 68
++K+ ++LG+ + + VY ++ T +A+K + M + + + +E+ L+
Sbjct: 12 DFKVGNLLGK--GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 128
HP+I+ + F D+ ++LV + G + E H + ++ G+ Y+
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITGMLYL 128
Query: 129 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NWLS 184
H G +HR + S++L++ N ++ P Y L N++S
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK--------MPHEKHYTLCGTPNYIS 180
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+ ++ G + SD++S+G L G PF
Sbjct: 181 PEIATRSAHGLE--SDVWSLGCMFYTLLIGRPPF 212
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHLR 418
++K+ ++LG+ + + VY ++ T +A+K + M + + + +E+ L+
Sbjct: 12 DFKVGNLLGK--GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYI 478
HP+I+ + F D+ ++LV + G + E H + ++ G+ Y+
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITGMLYL 128
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NWLS 534
H G +HR + S++L++ N ++ P Y L N++S
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK--------MPHEKHYTLCGTPNYIS 180
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+ ++ G + SD++S+G L G PF
Sbjct: 181 PEIATRSAHGLE--SDVWSLGCMFYTLLIGRPPF 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ + +G++Y+ G +HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGAVHRDLAARNILINSN--------- 183
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 210 E-LANGTVPFAE 220
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 76 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ + +G++Y+ G +HR + A +ILI+ N
Sbjct: 135 SFLRKHDAQFTVIQLV--GMLRGIASGMKYLSDMGAVHRDLAARNILINSN--------- 183
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W SPE + + SD++S GI
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR--KFTSASDVWSYGIVLW 241
Query: 560 E-LANGTVPFAE 570
E ++ G P+ E
Sbjct: 242 EVMSYGERPYWE 253
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 14/197 (7%)
Query: 29 LSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH-- 86
L K + I VK + + + + E +R HPN++ + + H
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG-KGFIHR-AVKASHIL 144
L++ M +GS ++++ NF + + D+ G+ ++H + I R A+ + ++
Sbjct: 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVM 145
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS-DIYS 203
I + A +S F P Y W++PE L++ + + RS D++S
Sbjct: 146 IDEDMTARISMADVKFSFQ---------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWS 196
Query: 204 VGISCCELANGTVPFAE 220
+ EL VPFA+
Sbjct: 197 FAVLLWELVTREVPFAD 213
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 14/197 (7%)
Query: 379 LSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH-- 436
L K + I VK + + + + E +R HPN++ + + H
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG-KGFIHR-AVKASHIL 494
L++ M +GS ++++ NF + + D+ G+ ++H + I R A+ + ++
Sbjct: 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVM 145
Query: 495 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS-DIYS 553
I + A +S F P Y W++PE L++ + + RS D++S
Sbjct: 146 IDEDMTARISMADVKFSFQ---------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWS 196
Query: 554 VGISCCELANGTVPFAE 570
+ EL VPFA+
Sbjct: 197 FAVLLWELVTREVPFAD 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 5 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
D + Y++ +G + V L+ H +T +++A+K + + + DL + EI +
Sbjct: 6 DELLKYYELHETIGT--GGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEAL 62
Query: 65 RHLRHPNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
++LRH +I C + L+ A + +V G D I + E + + + +++
Sbjct: 63 KNLRHQHI-CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV--VFRQIVS 119
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
+ Y+H +G+ HR +K ++L K L +C K HL + +L +
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFG-LCAKPKGNKDYHL--QTCCGSLAYA 176
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+PE++ Q +D++S+GI L G +PF
Sbjct: 177 APELI-QGKSYLGSEADVWSMGILLYVLMCGFLPF 210
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 355 DNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
D + Y++ +G + V L+ H +T +++A+K + + + DL + EI +
Sbjct: 6 DELLKYYELHETIGT--GGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEAL 62
Query: 415 RHLRHPNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
++LRH +I C + L+ A + +V G D I + E + + + +++
Sbjct: 63 KNLRHQHI-CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV--VFRQIVS 119
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
+ Y+H +G+ HR +K ++L K L +C K HL + +L +
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFG-LCAKPKGNKDYHL--QTCCGSLAYA 176
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+PE++ Q +D++S+GI L G +PF
Sbjct: 177 APELI-QGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + F+
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLD 109
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXX 167
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + F+
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLD 109
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXX 167
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 55/260 (21%)
Query: 71 NIICYISSFLDATDLHLVSPLMGFGSCKDLINA--HFNFGLPELVICHILQDVLNGLEYI 128
NI+ I F D T +LV + GS I HFN E +++DV L+++
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFN----EREASRVVRDVAAALDFL 127
Query: 129 HGKGFIHRAVKASHILISHNGKACL---------SGLRYMCPFSPTKKKVHLFPPSTAYN 179
H KG HR +K +IL K SG++ +P P +A
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA-- 185
Query: 180 LNWLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATP 236
+++PEV+E D YD+R D++S+G+ +L L+G P
Sbjct: 186 -EYMAPEVVEVFTDQATFYDKRCDLWSLGV-------------------VLYIMLSGYPP 225
Query: 237 HLLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKF----------SDSFHSIVELCL 286
+ C D G D GE C + + + K+ S ++ L
Sbjct: 226 FVGHCGA---DCGWDRGE--VCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLL 280
Query: 287 SRDVDKRPLACNLLQHAFFK 306
RD +R A +LQH + +
Sbjct: 281 VRDAKQRLSAAQVLQHPWVQ 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 421 NIICYISSFLDATDLHLVSPLMGFGSCKDLINA--HFNFGLPELVICHILQDVLNGLEYI 478
NI+ I F D T +LV + GS I HFN E +++DV L+++
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFN----EREASRVVRDVAAALDFL 127
Query: 479 HGKGFIHRAVKASHILISHNGKACL---------SGLRYMCPFSPTKKKVHLFPPSTAYN 529
H KG HR +K +IL K SG++ +P P +A
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA-- 185
Query: 530 LNWLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPF 568
+++PEV+E D YD+R D++S+G+ + +G PF
Sbjct: 186 -EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 40/200 (20%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+AVKK + K + E+V ++ + H NII ++ F + D++LV LM
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 149 -------GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
AC + + M P+ T+ + +PEV+ GY DI
Sbjct: 167 ILDFGLARTACTNFM--MTPYVVTR--------------YYRAPEVILGM--GYAANVDI 208
Query: 202 YSVGISCCELANGTVPFAET 221
+SVG EL G V F T
Sbjct: 209 WSVGCIMGELVKGCVIFQGT 228
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 40/200 (20%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+AVKK + K + E+V ++ + H NII ++ F + D++LV LM
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 499 -------GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
AC + + M P+ T+ + +PEV+ GY DI
Sbjct: 167 ILDFGLARTACTNFM--MTPYVVTR--------------YYRAPEVILGM--GYAANVDI 208
Query: 552 YSVGISCCELANGTVPFAET 571
+SVG EL G V F T
Sbjct: 209 WSVGCIMGELVKGCVIFQGT 228
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ +++ E M+ L+H ++ + +++++ M GS
Sbjct: 40 VAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLL 96
Query: 99 DLINAHFNFG--LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLS 154
D + + LP+L+ + G+ YI K +IHR ++A+++L+S + K
Sbjct: 97 DFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF 154
Query: 155 GL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 213
GL R + T ++ FP + W +PE + N + +SD++S GI E+
Sbjct: 155 GLARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGCFTIKSDVWSFGILLYEIVT 206
Query: 214 -GTVPF 218
G +P+
Sbjct: 207 YGKIPY 212
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ +++ E M+ L+H ++ + +++++ M GS
Sbjct: 40 VAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLL 96
Query: 449 DLINAHFNFG--LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLS 504
D + + LP+L+ + G+ YI K +IHR ++A+++L+S + K
Sbjct: 97 DFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF 154
Query: 505 GL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 563
GL R + T ++ FP + W +PE + N + +SD++S GI E+
Sbjct: 155 GLARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGCFTIKSDVWSFGILLYEIVT 206
Query: 564 -GTVPF 568
G +P+
Sbjct: 207 YGKIPY 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLK-SLHHEIVCMRH 66
++++ +LG+ + V+L++ K TNQ A+K D + D+D++ ++ + V
Sbjct: 18 EDFELHKMLGK--GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
HP + +F +L V + G I + F L +++ GL+
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQ 133
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
++H KG ++R +K +IL+ +G ++ K + F + Y ++PE
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDY----IAPE 189
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L Y+ D +S G+ E+ G PF
Sbjct: 190 ILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPF 219
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLK-SLHHEIVCMRH 416
++++ +LG+ + V+L++ K TNQ A+K D + D+D++ ++ + V
Sbjct: 18 EDFELHKMLGK--GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
HP + +F +L V + G I + F L +++ GL+
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQ 133
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
++H KG ++R +K +IL+ +G ++ K + F + Y ++PE
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDY----IAPE 189
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L Y+ D +S G+ E+ G PF
Sbjct: 190 ILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 23/222 (10%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE----DLKSLHHEIV 62
V +Y++ LG + V + K T + A K R++ + + E+
Sbjct: 3 VEDHYEMGEELGS--GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 63 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 122
+R +RHPNII F + TD+ L+ L+ G D + + L E L+ +L
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQIL 118
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKKVHLFPPST 176
+G+ Y+H K H +K +I++ K G+ + K + P
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP--- 175
Query: 177 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+++PE++ N + +D++S+G+ L +G PF
Sbjct: 176 ----EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 211
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 23/222 (10%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE----DLKSLHHEIV 412
V +Y++ LG + V + K T + A K R++ + + E+
Sbjct: 3 VEDHYEMGEELGS--GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 413 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVL 472
+R +RHPNII F + TD+ L+ L+ G D + + L E L+ +L
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQIL 118
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKKVHLFPPST 526
+G+ Y+H K H +K +I++ K G+ + K + P
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP--- 175
Query: 527 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+++PE++ N + +D++S+G+ L +G PF
Sbjct: 176 ----EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 59 HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHI 117
E + MR HP+I+ I + + ++ L G + + F+ L L++
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 118 LQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPP 174
+ L Y+ K F+HR + A ++L+S N L GL RYM + K P
Sbjct: 499 --QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP- 555
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
+ W++PE + N + SD++ G+ E L +G PF
Sbjct: 556 -----IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 409 HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHI 467
E + MR HP+I+ I + + ++ L G + + F+ L L++
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 468 LQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPP 524
+ L Y+ K F+HR + A ++L+S N L GL RYM + K P
Sbjct: 499 --QLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP- 555
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
+ W++PE + N + SD++ G+ E L +G PF
Sbjct: 556 -----IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 122 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 195
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 472 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 195
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 84
++VY K K+T+ L+A+K+ L+ ++ E+ ++ L+H NI+
Sbjct: 16 ATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHDIIHTEKS 74
Query: 85 LHLVSPLMG------FGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
L LV + C ++IN H N L L +L GL Y H + +HR +
Sbjct: 75 LTLVFEYLDKDLKQYLDDCGNIINMH-NVKL-------FLFQLLRGLAYCHRQKVLHRDL 126
Query: 139 KASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDE 197
K ++LI+ G+ L+ S PTK + L + P++L + D Y
Sbjct: 127 KPQNLLINERGELKLADFGLARAKSIPTKTY-----DNEVVTLWYRPPDILLGSTD-YST 180
Query: 198 RSDIYSVGISCCELANGTVPF 218
+ D++ VG E+A G F
Sbjct: 181 QIDMWGVGCIFYEMATGRPLF 201
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 22/201 (10%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD 434
++VY K K+T+ L+A+K+ L+ ++ E+ ++ L+H NI+
Sbjct: 16 ATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHDIIHTEKS 74
Query: 435 LHLVSPLMG------FGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
L LV + C ++IN H N L L +L GL Y H + +HR +
Sbjct: 75 LTLVFEYLDKDLKQYLDDCGNIINMH-NVKL-------FLFQLLRGLAYCHRQKVLHRDL 126
Query: 489 KASHILISHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDE 547
K ++LI+ G+ L+ S PTK + L + P++L + D Y
Sbjct: 127 KPQNLLINERGELKLADFGLARAKSIPTKTY-----DNEVVTLWYRPPDILLGSTD-YST 180
Query: 548 RSDIYSVGISCCELANGTVPF 568
+ D++ VG E+A G F
Sbjct: 181 QIDMWGVGCIFYEMATGRPLF 201
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 11/204 (5%)
Query: 34 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMG 93
+ Q A N +++ D + L E R L+HPNI+ S + +L+ L+
Sbjct: 34 LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVT 93
Query: 94 FGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC- 152
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 94 GGELFEDIVAREYYS--EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA 151
Query: 153 --LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
L+ ++ F + Y LSPEVL + D Y + D+++ G+
Sbjct: 152 VKLADFGLAIEVEGEQQAWFGFAGTPGY----LSPEVLRK--DPYGKPVDLWACGVILYI 205
Query: 211 LANGTVPFAETPTTLMLIEKLAGA 234
L G PF + + + AGA
Sbjct: 206 LLVGYPPFWDEDQHRLYQQIKAGA 229
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 11/204 (5%)
Query: 384 VTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMG 443
+ Q A N +++ D + L E R L+HPNI+ S + +L+ L+
Sbjct: 34 LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVT 93
Query: 444 FGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC- 502
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 94 GGELFEDIVAREYYS--EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA 151
Query: 503 --LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
L+ ++ F + Y LSPEVL + D Y + D+++ G+
Sbjct: 152 VKLADFGLAIEVEGEQQAWFGFAGTPGY----LSPEVLRK--DPYGKPVDLWACGVILYI 205
Query: 561 LANGTVPFAETPTTLMLIEKLAGA 584
L G PF + + + AGA
Sbjct: 206 LLVGYPPFWDEDQHRLYQQIKAGA 229
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ +++ E M+ L+H ++ + + + +++++ M GS
Sbjct: 215 VAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLL 270
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL 156
D + + P + + G+ +I + +IHR ++A++IL+S + K GL
Sbjct: 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL 330
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 331 ARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYG 382
Query: 215 TVPFA--ETPTTLMLIEK 230
+P+ P + +E+
Sbjct: 383 RIPYPGMSNPEVIRALER 400
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 18/198 (9%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ +++ E M+ L+H ++ + + + +++++ M GS
Sbjct: 215 VAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLL 270
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL 506
D + + P + + G+ +I + +IHR ++A++IL+S + K GL
Sbjct: 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL 330
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 331 ARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYG 382
Query: 565 TVPFA--ETPTTLMLIEK 580
+P+ P + +E+
Sbjct: 383 RIPYPGMSNPEVIRALER 400
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 67
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 14 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 71
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 122
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 123
Query: 123 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 176
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+ +PEV+ L E D++S G+ + +PF
Sbjct: 177 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPF 213
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 417
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 14 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 71
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 472
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 123
Query: 473 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 176
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+ +PEV+ L E D++S G+ + +PF
Sbjct: 177 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPF 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ +R +RHPNII F + TD+ L+ L+ G D + + L E
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEA 131
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +L+G+ Y+H K H +K +I++ K G+ + K
Sbjct: 132 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 191
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 192 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 232
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ +R +RHPNII F + TD+ L+ L+ G D + + L E
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEA 131
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +L+G+ Y+H K H +K +I++ K G+ + K
Sbjct: 132 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 191
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 192 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 38/217 (17%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLM-----GFGSCKDLINAHFNFGLPELVICH 116
H NII I+ + A D+++V LM C+ L N H IC+
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDH---------ICY 132
Query: 117 ILQDVLNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPP 174
L +L GL+YIH +HR +K S++L++ + K C GL + P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTE 190
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
A + +PE++ N GY + DI+SVG E+
Sbjct: 191 YVATRW-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 90/217 (41%), Gaps = 38/217 (17%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLM-----GFGSCKDLINAHFNFGLPELVICH 466
H NII I+ + A D+++V LM C+ L N H IC+
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDH---------ICY 132
Query: 467 ILQDVLNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPP 524
L +L GL+YIH +HR +K S++L++ + K C GL + P
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTE 190
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
A + +PE++ N GY + DI+SVG E+
Sbjct: 191 YVATRW-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLV 88
+ K +++ K+ + MT+ + + L E+ +R L+HPNI+ Y +D T+ L++V
Sbjct: 26 RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 89 SPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIH-----GKGFIHRAVKAS 141
G +I L E + ++ + L+ H G +HR +K +
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 142 HILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 199
++ + N K GL + + K + P ++SPE + N Y+E+S
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY------YMSPE--QMNRMSYNEKS 197
Query: 200 DIYSVGISCCELANGTVPFA 219
DI+S+G EL PF
Sbjct: 198 DIWSLGCLLYELCALMPPFT 217
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLV 438
+ K +++ K+ + MT+ + + L E+ +R L+HPNI+ Y +D T+ L++V
Sbjct: 26 RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 439 SPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIH-----GKGFIHRAVKAS 491
G +I L E + ++ + L+ H G +HR +K +
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 492 HILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 549
++ + N K GL + + K + P ++SPE + N Y+E+S
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPY------YMSPE--QMNRMSYNEKS 197
Query: 550 DIYSVGISCCELANGTVPFA 569
DI+S+G EL PF
Sbjct: 198 DIWSLGCLLYELCALMPPFT 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLK-SLHHEIVCMRH 66
++ + +LG+ + V+L++ K TNQ A+K D + D+D++ ++ + V
Sbjct: 17 EDFILHKMLGK--GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
HP + +F +L V + G I + F L +++ GL+
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQ 132
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
++H KG ++R +K +IL+ +G ++ K + F + Y ++PE
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDY----IAPE 188
Query: 187 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+L Y+ D +S G+ E+ G PF
Sbjct: 189 ILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPF 218
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLK-SLHHEIVCMRH 416
++ + +LG+ + V+L++ K TNQ A+K D + D+D++ ++ + V
Sbjct: 17 EDFILHKMLGK--GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
HP + +F +L V + G I + F L +++ GL+
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQ 132
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
++H KG ++R +K +IL+ +G ++ K + F + Y ++PE
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDY----IAPE 188
Query: 537 VLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+L Y+ D +S G+ E+ G PF
Sbjct: 189 ILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 86
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 47 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 103
Query: 87 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 136
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 104 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 158
Query: 137 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 194
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 159 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 218
Query: 195 YD--ERSDIYSVGISCCELAN 213
++ +R+DIY++G+ E+A
Sbjct: 219 FESFKRADIYAMGLVFWEIAR 239
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 436
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 47 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 103
Query: 437 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 486
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 104 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 158
Query: 487 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 544
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 159 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 218
Query: 545 YD--ERSDIYSVGISCCELAN 563
++ +R+DIY++G+ E+A
Sbjct: 219 FESFKRADIYAMGLVFWEIAR 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLV 88
+ K +++ K+ + MT+ + + L E+ +R L+HPNI+ Y +D T+ L++V
Sbjct: 26 RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 89 SPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIH-----GKGFIHRAVKAS 141
G +I L E + ++ + L+ H G +HR +K +
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 142 HILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 199
++ + N K GL + + K + P ++SPE + N Y+E+S
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY------YMSPE--QMNRMSYNEKS 197
Query: 200 DIYSVGISCCELANGTVPFA 219
DI+S+G EL PF
Sbjct: 198 DIWSLGCLLYELCALMPPFT 217
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 19/200 (9%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLV 438
+ K +++ K+ + MT+ + + L E+ +R L+HPNI+ Y +D T+ L++V
Sbjct: 26 RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 439 SPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIH-----GKGFIHRAVKAS 491
G +I L E + ++ + L+ H G +HR +K +
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 492 HILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 549
++ + N K GL + + K + P ++SPE + N Y+E+S
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY------YMSPE--QMNRMSYNEKS 197
Query: 550 DIYSVGISCCELANGTVPFA 569
DI+S+G EL PF
Sbjct: 198 DIWSLGCLLYELCALMPPFT 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 6 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
+V Y S +G+ + + S Y + +KV +A+KK + ++L EI +
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYXQRTLR-EIKIL 79
Query: 65 RHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 118
RH NII I+ + A D+++V LM K L H L IC+ L
Sbjct: 80 LRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFL 134
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPST 176
+L GL+YIH +HR +K S++L+ + + K C GL + P
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYV 192
Query: 177 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
A + +PE++ N GY + DI+SVG E+
Sbjct: 193 ATRW-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 356 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
+V Y S +G+ + + S Y + +KV +A+KK + ++L EI +
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYXQRTLR-EIKIL 79
Query: 415 RHLRHPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHIL 468
RH NII I+ + A D+++V LM K L H L IC+ L
Sbjct: 80 LRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFL 134
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPST 526
+L GL+YIH +HR +K S++L+ + + K C GL + P
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYV 192
Query: 527 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
A + +PE++ N GY + DI+SVG E+
Sbjct: 193 ATRW-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 26/227 (11%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 67
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 13 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 70
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 122
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 122
Query: 123 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 175
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLML 227
N+ +PEV+ L E D++S G+ + +PF + ++
Sbjct: 176 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDESIPVLF 221
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 26/227 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 417
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 13 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 70
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 472
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 122
Query: 473 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 175
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLML 577
N+ +PEV+ L E D++S G+ + +PF + ++
Sbjct: 176 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPFDDESIPVLF 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 86
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 60 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116
Query: 87 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 136
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 117 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 171
Query: 137 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 194
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231
Query: 195 YD--ERSDIYSVGISCCELAN 213
++ +R+DIY++G+ E+A
Sbjct: 232 FESFKRADIYAMGLVFWEIAR 252
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 436
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 60 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116
Query: 437 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 486
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 117 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 171
Query: 487 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 544
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231
Query: 545 YD--ERSDIYSVGISCCELAN 563
++ +R+DIY++G+ E+A
Sbjct: 232 FESFKRADIYAMGLVFWEIAR 252
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 98/233 (42%), Gaps = 29/233 (12%)
Query: 342 NINDTFNSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD 401
N++D +++ E V + K C ++ ++ K + + V + +++R
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQ-YAAKFIKKRRTKSSRRGVSREDIER--- 63
Query: 402 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPE 461
E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 64 --------EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTE 113
Query: 462 LVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPT 515
L+ +LNG+ Y+H H +K +I++ K GL + F
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
K + P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 174 FKNIFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 67
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 8 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 65
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 122
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 117
Query: 123 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 170
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+ +PEV+ L E D++S G+ + +PF
Sbjct: 171 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPF 207
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 417
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 8 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 65
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 472
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 117
Query: 473 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 170
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+ +PEV+ L E D++S G+ + +PF
Sbjct: 171 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPF 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ E + E M+ L+H ++ + + + +++++ M GS
Sbjct: 42 VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLL 97
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL 156
D + + P + + G+ +I + +IHR ++A++IL+S + K GL
Sbjct: 98 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL 157
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 158 ARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYG 209
Query: 215 TVPF 218
+P+
Sbjct: 210 RIPY 213
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ E + E M+ L+H ++ + + + +++++ M GS
Sbjct: 42 VAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLL 97
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL 506
D + + P + + G+ +I + +IHR ++A++IL+S + K GL
Sbjct: 98 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGL 157
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 158 ARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYG 209
Query: 565 TVPF 568
+P+
Sbjct: 210 RIPY 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 23 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 81 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 135
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ K C GL + P A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVA--DPDHDHTGFLTEYVATR 193
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 194 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 223
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 23 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 81 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 135
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ K C GL + P A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVA--DPDHDHTGFLTEYVATR 193
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 194 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 67
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 4 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 122
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 113
Query: 123 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 166
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+ +PEV+ L E D++S G+ + +PF
Sbjct: 167 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPF 203
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS-LHHEIVCMRHL 417
NY+I LG+ + V L+ H T Q +A+K N + D++ + EI +R L
Sbjct: 4 GNYQIVKTLGE--GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNF-----GLPELVICHILQDVL 472
RHP+II ++ +V G N F++ + E Q ++
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAG--------NELFDYIVQRDKMSEQEARRFFQQII 113
Query: 473 NGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
+ +EY H +HR +K ++L+ N K GL + F ++ +
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-------FLKTSCGSP 166
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+ +PEV+ L E D++S G+ + +PF
Sbjct: 167 NYAAPEVISGKLYAGPE-VDVWSCGVILYVMLCRRLPF 203
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 122 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 472 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 86
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 22 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 78
Query: 87 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 136
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 79 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 133
Query: 137 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 194
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 134 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 193
Query: 195 YD--ERSDIYSVGISCCELAN 213
++ +R+DIY++G+ E+A
Sbjct: 194 FESFKRADIYAMGLVFWEIAR 214
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 436
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 22 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 78
Query: 437 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 486
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 79 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 133
Query: 487 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 544
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 134 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 193
Query: 545 YD--ERSDIYSVGISCCELAN 563
++ +R+DIY++G+ E+A
Sbjct: 194 FESFKRADIYAMGLVFWEIAR 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 86
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 27 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 83
Query: 87 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 136
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 84 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 138
Query: 137 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 194
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 139 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 198
Query: 195 YD--ERSDIYSVGISCCELAN 213
++ +R+DIY++G+ E+A
Sbjct: 199 FESFKRADIYAMGLVFWEIAR 219
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 436
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 27 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 83
Query: 437 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 486
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 84 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 138
Query: 487 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 544
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 139 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 198
Query: 545 YD--ERSDIYSVGISCCELAN 563
++ +R+DIY++G+ E+A
Sbjct: 199 FESFKRADIYAMGLVFWEIAR 219
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 122 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 472 LNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L+ + + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ +++ E M+ L+H ++ + +++++ M GS
Sbjct: 39 VAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLL 95
Query: 99 DLINAHFNFG--LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLS 154
D + + LP+L+ + G+ YI K +IHR ++A+++L+S + K
Sbjct: 96 DFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF 153
Query: 155 GL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 213
GL R + T ++ FP + W +PE + N + +S+++S GI E+
Sbjct: 154 GLARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGCFTIKSNVWSFGILLYEIVT 205
Query: 214 -GTVPF 218
G +P+
Sbjct: 206 YGKIPY 211
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ +++ E M+ L+H ++ + +++++ M GS
Sbjct: 39 VAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLL 95
Query: 449 DLINAHFNFG--LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLS 504
D + + LP+L+ + G+ YI K +IHR ++A+++L+S + K
Sbjct: 96 DFLKSDEGGKVLLPKLI--DFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF 153
Query: 505 GL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN 563
GL R + T ++ FP + W +PE + N + +S+++S GI E+
Sbjct: 154 GLARVIEDNEYTAREGAKFP------IKWTAPEAI--NFGCFTIKSNVWSFGILLYEIVT 205
Query: 564 -GTVPF 568
G +P+
Sbjct: 206 YGKIPY 211
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 86
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 21 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77
Query: 87 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 136
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 132
Query: 137 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 194
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192
Query: 195 YD--ERSDIYSVGISCCELAN 213
++ +R+DIY++G+ E+A
Sbjct: 193 FESFKRADIYAMGLVFWEIAR 213
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 436
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 21 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77
Query: 437 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 486
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 132
Query: 487 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 544
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192
Query: 545 YD--ERSDIYSVGISCCELAN 563
++ +R+DIY++G+ E+A
Sbjct: 193 FESFKRADIYAMGLVFWEIAR 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 52 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKD-LINAHFNFGLP 110
+D + + +EI M L H N+I +F D+ LV + G D +I+ +N L
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LT 185
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNGKACLSGLRYMCPFSPTKKKV 169
EL ++ + G+ ++H +H +K +IL ++ + K + F ++
Sbjct: 186 ELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI-----KIIDFGLARR-- 238
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERS---DIYSVGISCCELANGTVPFAETPTTLM 226
+ P +N+ +PE L + YD S D++SVG+ L +G PF
Sbjct: 239 --YKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF-------- 288
Query: 227 LIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 263
L + A ++L C D D E A +IS+
Sbjct: 289 LGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 24/217 (11%)
Query: 402 EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKD-LINAHFNFGLP 460
+D + + +EI M L H N+I +F D+ LV + G D +I+ +N L
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LT 185
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL-ISHNGKACLSGLRYMCPFSPTKKKV 519
EL ++ + G+ ++H +H +K +IL ++ + K + F ++
Sbjct: 186 ELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQI-----KIIDFGLARR-- 238
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERS---DIYSVGISCCELANGTVPFAETPTTLM 576
+ P +N+ +PE L + YD S D++SVG+ L +G PF
Sbjct: 239 --YKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF-------- 288
Query: 577 LIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 613
L + A ++L C D D E A +IS+
Sbjct: 289 LGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISK 325
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLXEXVATR 195
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLXEXVATR 195
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 26 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 84 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 138
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLXEXVATR 196
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 197 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 226
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 26 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 84 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 138
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLXEXVATR 196
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 197 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 19 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 77 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 131
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 189
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 190 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 219
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 19 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 77 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 131
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 189
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 190 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 219
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 86
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 24 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 80
Query: 87 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 136
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 81 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 135
Query: 137 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 194
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 136 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 195
Query: 195 YD--ERSDIYSVGISCCELAN 213
++ +R+DIY++G+ E+A
Sbjct: 196 FESFKRADIYAMGLVFWEIAR 216
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS----FLDATDLH 436
+ K + +AVK F+ +E EI LRH NI+ +I++ T L
Sbjct: 24 RGKWRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 80
Query: 437 LVSPLMGFGSCKDLINAHFNF--GLPELVICHILQDVLNGLEYIH-------GKGFI-HR 486
LVS GS D +N + G+ +L + +GL ++H GK I HR
Sbjct: 81 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALS-----TASGLAHLHMEIVGTQGKPAIAHR 135
Query: 487 AVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQ--NLDG 544
+K+ +IL+ NG C++ L + + P +++PEVL+ N+
Sbjct: 136 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 195
Query: 545 YD--ERSDIYSVGISCCELAN 563
++ +R+DIY++G+ E+A
Sbjct: 196 FESFKRADIYAMGLVFWEIAR 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V A +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLAGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V A +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLAGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 26 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 84 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 138
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 196
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 197 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 226
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 26 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 83
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 84 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 138
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 196
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 197 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 27 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 84
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 85 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 139
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 197
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 198 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 227
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 27 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 84
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 85 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 139
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 197
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 198 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 18 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 75
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 76 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 130
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 188
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 189 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 218
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 18 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 75
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 76 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 130
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 188
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 189 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 195
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 82
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 195
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 19 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 77 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 131
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 189
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 190 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 219
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 19 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 76
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 77 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 131
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 189
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 190 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 219
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
+ V+ K K T AVKK L+ E E+V L P I+ + +
Sbjct: 83 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVRE 135
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
+++ L+ GS LI G LPE + L L GLEY+H + +H VKA
Sbjct: 136 GPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 192
Query: 141 SHILISHNG-KACLSGLRYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGY 195
++L+S +G +A L + P L + P T + ++PEV+
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH---MAPEVVMGKP--C 247
Query: 196 DERSDIYSVGISCC---ELANGTVPFAE 220
D + DI+S SCC + NG P+ +
Sbjct: 248 DAKVDIWS---SCCMMLHMLNGCHPWTQ 272
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
+ V+ K K T AVKK L+ E E+V L P I+ + +
Sbjct: 83 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVRE 135
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
+++ L+ GS LI G LPE + L L GLEY+H + +H VKA
Sbjct: 136 GPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 192
Query: 491 SHILISHNG-KACLSGLRYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGY 545
++L+S +G +A L + P L + P T + ++PEV+
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH---MAPEVVMGKP--C 247
Query: 546 DERSDIYSVGISCC---ELANGTVPFAE 570
D + DI+S SCC + NG P+ +
Sbjct: 248 DAKVDIWS---SCCMMLHMLNGCHPWTQ 272
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S+++ ++LGQ V +++ + ++ A+KK R T+E L ++ E+ + L
Sbjct: 6 SDFEEIAVLGQ--GAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVXLLASLN 60
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFG---------------SCKDLINAHFNFGLPELV 113
H ++ Y +++L+ + V P + DLI++ N
Sbjct: 61 HQYVVRYYAAWLERRNF--VKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDE 117
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHL 171
+ + +L L YIH +G IHR +K +I I S N K GL S K+
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 172 FP-PSTAYNLN-------WLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPFAE 220
P ++ NL +++ EV LDG Y+E+ D YS+GI E PF+
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEV----LDGTGHYNEKIDXYSLGIIFFEX---IYPFST 230
Query: 221 TPTTLMLIEKLAGAT 235
+ +++KL +
Sbjct: 231 GXERVNILKKLRSVS 245
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S+++ ++LGQ V +++ + ++ A+KK R T+E L ++ E+ + L
Sbjct: 6 SDFEEIAVLGQ--GAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVXLLASLN 60
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFG---------------SCKDLINAHFNFGLPELV 463
H ++ Y +++L+ + V P + DLI++ N
Sbjct: 61 HQYVVRYYAAWLERRNF--VKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE-NLNQQRDE 117
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMCPFSPTKKKVHL 521
+ + +L L YIH +G IHR +K +I I S N K GL S K+
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 522 FP-PSTAYNLN-------WLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPFAE 570
P ++ NL +++ EV LDG Y+E+ D YS+GI E PF+
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEV----LDGTGHYNEKIDXYSLGIIFFEX---IYPFST 230
Query: 571 TPTTLMLIEKLAGAT 585
+ +++KL +
Sbjct: 231 GXERVNILKKLRSVS 245
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR---HPNII-----CYISSFLDATDLHL 87
+ +A+K+ + + S E+ +RHL HPN++ C +S T L L
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96
Query: 88 VSPLMGFGSCKDLINAHFNF----GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 143
V F + + + G+P I ++ +L GL+++H +HR +K +I
Sbjct: 97 V-----FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151
Query: 144 LISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
L++ +G+ L+ GL + F + S L + +PEVL Q+ Y D+
Sbjct: 152 LVTSSGQIKLADFGLARIYSF-------QMALTSVVVTLWYRAPEVLLQS--SYATPVDL 202
Query: 202 YSVGISCCEL 211
+SVG E+
Sbjct: 203 WSVGCIFAEM 212
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR---HPNII-----CYISSFLDATDLHL 437
+ +A+K+ + + S E+ +RHL HPN++ C +S T L L
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96
Query: 438 VSPLMGFGSCKDLINAHFNF----GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 493
V F + + + G+P I ++ +L GL+++H +HR +K +I
Sbjct: 97 V-----FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151
Query: 494 LISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
L++ +G+ L+ GL + F + S L + +PEVL Q+ Y D+
Sbjct: 152 LVTSSGQIKLADFGLARIYSF-------QMALTSVVVTLWYRAPEVLLQS--SYATPVDL 202
Query: 552 YSVGISCCEL 561
+SVG E+
Sbjct: 203 WSVGCIFAEM 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 115
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 176 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 216
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 115
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 176 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRF 82
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 195
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + H+ C R LR
Sbjct: 25 VGPRYTNLS--YIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRF 82
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 83 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 137
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 195
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 196 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 115
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 176 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 216
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 115
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 176 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
+ V+ K K T AVKK L+ E E+V L P I+ + +
Sbjct: 85 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVRE 137
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
+++ L+ GS LI G LPE + L L GLEY+H + +H VKA
Sbjct: 138 GPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 194
Query: 141 SHILISHNG-KACLSGLRYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGY 195
++L+S +G +A L + P L + P T + ++PEV+
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH---MAPEVVMGKP--C 249
Query: 196 DERSDIYSVGISCC---ELANGTVPFAE 220
D + DI+S SCC + NG P+ +
Sbjct: 250 DAKVDIWS---SCCMMLHMLNGCHPWTQ 274
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
+ V+ K K T AVKK L+ E E+V L P I+ + +
Sbjct: 85 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVRE 137
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
+++ L+ GS LI G LPE + L L GLEY+H + +H VKA
Sbjct: 138 GPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 194
Query: 491 SHILISHNG-KACLSGLRYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGY 545
++L+S +G +A L + P L + P T + ++PEV+
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH---MAPEVVMGKP--C 249
Query: 546 DERSDIYSVGISCC---ELANGTVPFAE 570
D + DI+S SCC + NG P+ +
Sbjct: 250 DAKVDIWS---SCCMMLHMLNGCHPWTQ 274
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 23 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 81 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 135
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 193
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 194 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 223
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 23 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAF 80
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 81 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 135
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 193
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 194 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR---HPNII-----CYISSFLDATDLHL 87
+ +A+K+ + + S E+ +RHL HPN++ C +S T L L
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96
Query: 88 VSPLMGFGSCKDLINAHFNF----GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 143
V F + + + G+P I ++ +L GL+++H +HR +K +I
Sbjct: 97 V-----FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151
Query: 144 LISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
L++ +G+ L+ GL + F + S L + +PEVL Q+ Y D+
Sbjct: 152 LVTSSGQIKLADFGLARIYSF-------QMALTSVVVTLWYRAPEVLLQS--SYATPVDL 202
Query: 202 YSVGISCCEL 211
+SVG E+
Sbjct: 203 WSVGCIFAEM 212
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR---HPNII-----CYISSFLDATDLHL 437
+ +A+K+ + + S E+ +RHL HPN++ C +S T L L
Sbjct: 37 GRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 96
Query: 438 VSPLMGFGSCKDLINAHFNF----GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHI 493
V F + + + G+P I ++ +L GL+++H +HR +K +I
Sbjct: 97 V-----FEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151
Query: 494 LISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
L++ +G+ L+ GL + F + S L + +PEVL Q+ Y D+
Sbjct: 152 LVTSSGQIKLADFGLARIYSF-------QMALTSVVVTLWYRAPEVLLQS--SYATPVDL 202
Query: 552 YSVGISCCEL 561
+SVG E+
Sbjct: 203 WSVGCIFAEM 212
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
+ V+ K K T AVKK L+ E E+V L P I+ + +
Sbjct: 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVRE 121
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
+++ L+ GS LI G LPE + L L GLEY+H + +H VKA
Sbjct: 122 GPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 178
Query: 141 SHILISHNG-KACLSGLRYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGY 195
++L+S +G +A L + P L + P T + ++PEV+
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH---MAPEVVMGKP--C 233
Query: 196 DERSDIYSVGISCC---ELANGTVPFAE 220
D + DI+S SCC + NG P+ +
Sbjct: 234 DAKVDIWS---SCCMMLHMLNGCHPWTQ 258
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
+ V+ K K T AVKK L+ E E+V L P I+ + +
Sbjct: 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-------ELVACAGLSSPRIVPLYGAVRE 121
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFG-LPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
+++ L+ GS LI G LPE + L L GLEY+H + +H VKA
Sbjct: 122 GPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 178
Query: 491 SHILISHNG-KACLSGLRYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGY 545
++L+S +G +A L + P L + P T + ++PEV+
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH---MAPEVVMGKP--C 233
Query: 546 DERSDIYSVGISCC---ELANGTVPFAE 570
D + DI+S SCC + NG P+ +
Sbjct: 234 DAKVDIWS---SCCMMLHMLNGCHPWTQ 258
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 27 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT--- 83
V++ K + + +AVK F T+E EI +RH NI+ +I++ + T
Sbjct: 53 VWMGKWR--GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 84 -DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGF--------I 134
L+L++ GS D + + L + + ++GL ++H + F
Sbjct: 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 135 HRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
HR +K+ +IL+ NG C++ L F +V + P + ++ PEVL+++L+
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNR 224
Query: 195 YDERS----DIYSVGISCCELAN 213
+S D+YS G+ E+A
Sbjct: 225 NHFQSYIMADMYSFGLILWEVAR 247
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 377 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDAT--- 433
V++ K + + +AVK F T+E EI +RH NI+ +I++ + T
Sbjct: 53 VWMGKWR--GEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 434 -DLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGF--------I 484
L+L++ GS D + + L + + ++GL ++H + F
Sbjct: 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 485 HRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
HR +K+ +IL+ NG C++ L F +V + P + ++ PEVL+++L+
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNR 224
Query: 545 YDERS----DIYSVGISCCELAN 563
+S D+YS G+ E+A
Sbjct: 225 NHFQSYIMADMYSFGLILWEVAR 247
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 50/229 (21%)
Query: 6 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 64
+V Y +G+ + +SS Y V +A+KK + H+ C
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAY---DHVRKTRVAIKK----------ISPFEHQTYCQ 86
Query: 65 RHLR---------HPNIICYISSFLDAT------DLHLVSPLM-----GFGSCKDLINAH 104
R LR H N+I I L A+ D+++V LM + L N H
Sbjct: 87 RTLREIQILLRFRHENVIG-IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDH 145
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPF 162
IC+ L +L GL+YIH +HR +K S++LI+ + K C GL +
Sbjct: 146 ---------ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIA-- 194
Query: 163 SPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
P A + +PE++ N GY + DI+SVG E+
Sbjct: 195 DPEHDHTGFLTEXVATRW-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 241
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 50/229 (21%)
Query: 356 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCM 414
+V Y +G+ + +SS Y V +A+KK + H+ C
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAY---DHVRKTRVAIKK----------ISPFEHQTYCQ 86
Query: 415 RHLR---------HPNIICYISSFLDAT------DLHLVSPLM-----GFGSCKDLINAH 454
R LR H N+I I L A+ D+++V LM + L N H
Sbjct: 87 RTLREIQILLRFRHENVIG-IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDH 145
Query: 455 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPF 512
IC+ L +L GL+YIH +HR +K S++LI+ + K C GL +
Sbjct: 146 ---------ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIA-- 194
Query: 513 SPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
P A + +PE++ N GY + DI+SVG E+
Sbjct: 195 DPEHDHTGFLTEXVATRW-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 241
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 36/189 (19%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 106 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E D++S
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDLWS 204
Query: 204 VGISCCELA 212
VG E+
Sbjct: 205 VGCIMGEMV 213
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 36/189 (19%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 106 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 160
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E D++S
Sbjct: 161 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDLWS 204
Query: 554 VGISCCELA 562
VG E+
Sbjct: 205 VGCIMGEMV 213
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 29 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 86
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 87 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 141
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 199
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 200 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 229
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 29 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 86
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 87 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 141
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 199
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 200 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 191
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 192 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 36/189 (19%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 117 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 171
Query: 149 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
G A +G + M P+ T+ + +PEV+ GY E D++S
Sbjct: 172 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDLWS 215
Query: 204 VGISCCELA 212
VG E+
Sbjct: 216 VGCIMGEMV 224
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 36/189 (19%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 117 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 171
Query: 499 ----GKACLSGLRY-MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
G A +G + M P+ T+ + +PEV+ GY E D++S
Sbjct: 172 ILDFGLARTAGTSFMMTPYVVTR--------------YYRAPEVILGM--GYKENVDLWS 215
Query: 554 VGISCCELA 562
VG E+
Sbjct: 216 VGCIMGEMV 224
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTPA-------FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTPA-------FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFG 95
N +A+K M+ E S E M+ L+H ++ + + + +++V+ M G
Sbjct: 33 NTKVAIKTLKPGTMSPE---SFLEEAQIMKKLKHDKLV-QLYAVVSEEPIYIVTEYMNKG 88
Query: 96 SCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC--- 152
S D + L + + V G+ YI +IHR +++++IL+ NG C
Sbjct: 89 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG-NGLICKIA 147
Query: 153 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG-YDERSDIYSVGISCCE 210
R + T ++ FP + W +PE L G + +SD++S GI E
Sbjct: 148 DFGLARLIEDNEXTARQGAKFP------IKWTAPEA---ALYGRFTIKSDVWSFGILLTE 198
Query: 211 LA-NGTVPF 218
L G VP+
Sbjct: 199 LVTKGRVPY 207
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 20/189 (10%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFG 445
N +A+K M+ E S E M+ L+H ++ + + + +++V+ M G
Sbjct: 33 NTKVAIKTLKPGTMSPE---SFLEEAQIMKKLKHDKLV-QLYAVVSEEPIYIVTEYMNKG 88
Query: 446 SCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC--- 502
S D + L + + V G+ YI +IHR +++++IL+ NG C
Sbjct: 89 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG-NGLICKIA 147
Query: 503 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDG-YDERSDIYSVGISCCE 560
R + T ++ FP + W +PE L G + +SD++S GI E
Sbjct: 148 DFGLARLIEDNEXTARQGAKFP------IKWTAPEA---ALYGRFTIKSDVWSFGILLTE 198
Query: 561 LA-NGTVPF 568
L G VP+
Sbjct: 199 LVTKGRVPY 207
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 23 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 80
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 81 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 135
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 193
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 194 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 223
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 23 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 80
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 81 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 135
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 193
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 194 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T+EDL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T+EDL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ ++ ++HPN+I + + TD+ L+ L+ G D + + L E
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
L+ +LNG+ Y+H H +K +I++ K GL + F K
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 177 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y+ + +G +VY ++ + +A+K + + S E+ +R L
Sbjct: 4 SRYEPVAEIG--VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 69 ---HPNIICYISS-FLDATDLHLVSPLMGFGSCKDL---INAHFNFGLPELVICHILQDV 121
HPN++ + TD + L+ +DL ++ GLP I +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
L GL+++H +HR +K +IL++ G L+ +S ++ LFP L
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFP--VVVTLW 176
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PEVL Q+ Y D++SVG E+
Sbjct: 177 YRAPEVLLQST--YATPVDMWSVGCIFAEM 204
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 16/210 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y+ + +G +VY ++ + +A+K + + S E+ +R L
Sbjct: 4 SRYEPVAEIG--VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 419 ---HPNIICYISS-FLDATDLHLVSPLMGFGSCKDL---INAHFNFGLPELVICHILQDV 471
HPN++ + TD + L+ +DL ++ GLP I +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
L GL+++H +HR +K +IL++ G L+ +S ++ LFP L
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFP--VVVTLW 176
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PEVL Q+ Y D++SVG E+
Sbjct: 177 YRAPEVLLQST--YATPVDMWSVGCIFAEM 204
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 41 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 99 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 153
Query: 122 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 179
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 211
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 212 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 241
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 28/212 (13%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 41 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 98
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 99 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 153
Query: 472 LNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN 529
L GL+YIH +HR +K S++L++ + K C GL + P A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA--DPDHDHTGFLTEYVATR 211
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 212 W-YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 241
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 22/195 (11%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ +++ E M+ L+H ++ + + + +++++ M GS
Sbjct: 209 VAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLL 264
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRY 158
D + + P + + G+ +I + +IHR ++A++IL+S A L
Sbjct: 265 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS----ASL----- 315
Query: 159 MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP 217
+C + L + + W +PE + N + +SD++S GI E+ G +P
Sbjct: 316 VCKIA----DFGLARVGAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIP 369
Query: 218 FA--ETPTTLMLIEK 230
+ P + +E+
Sbjct: 370 YPGMSNPEVIRALER 384
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 86/195 (44%), Gaps = 22/195 (11%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ +++ E M+ L+H ++ + + + +++++ M GS
Sbjct: 209 VAVKTMKPGSMS---VEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMAKGSLL 264
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRY 508
D + + P + + G+ +I + +IHR ++A++IL+S A L
Sbjct: 265 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS----ASL----- 315
Query: 509 MCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP 567
+C + L + + W +PE + N + +SD++S GI E+ G +P
Sbjct: 316 VCKIA----DFGLARVGAKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIP 369
Query: 568 FA--ETPTTLMLIEK 580
+ P + +E+
Sbjct: 370 YPGMSNPEVIRALER 384
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 8 PSNYKICSILGQC-FNNLSSVYLSKHKVTNQLIAVK--KFNLDRMTDEDLKSLHHEIVCM 64
P +++ +LG+ + + V T ++ A+K K + +D E +
Sbjct: 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 124
++HP I+ I +F L+L+ + G + F E C L ++
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF--MEDTACFYLAEISMA 133
Query: 125 LEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNW 182
L ++H KG I+R +K +I+++H G L+ F K+ +H + + + +
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTD------FGLCKESIHDGTVTHTFCGTIEY 187
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++PE+L ++ G++ D +S+G ++ G PF
Sbjct: 188 MAPEILMRS--GHNRAVDWWSLGALMYDMLTGAPPF 221
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 358 PSNYKICSILGQC-FNNLSSVYLSKHKVTNQLIAVK--KFNLDRMTDEDLKSLHHEIVCM 414
P +++ +LG+ + + V T ++ A+K K + +D E +
Sbjct: 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 474
++HP I+ I +F L+L+ + G + F E C L ++
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF--MEDTACFYLAEISMA 133
Query: 475 LEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNW 532
L ++H KG I+R +K +I+++H G L+ F K+ +H + + + +
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTD------FGLCKESIHDGTVTHTFCGTIEY 187
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE+L ++ G++ D +S+G ++ G PF
Sbjct: 188 MAPEILMRS--GHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 94
T A K N +++ D + L E R L+H NI+ S + +LV L+
Sbjct: 28 TGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC-- 152
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 88 GELFEDIVAREYYS--EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAV 145
Query: 153 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
L+ ++ F + Y LSPEVL + + Y + DI++ G+ L
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGY----LSPEVLRK--EAYGKPVDIWACGVILYIL 199
Query: 212 ANGTVPFAETPTTLMLIEKLAGA 234
G PF + + + AGA
Sbjct: 200 LVGYPPFWDEDQHKLYQQIKAGA 222
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 11/203 (5%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGF 444
T A K N +++ D + L E R L+H NI+ S + +LV L+
Sbjct: 28 TGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTG 87
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKAC-- 502
G + I A + E H +Q +L + + H G +HR +K ++L++ K
Sbjct: 88 GELFEDIVAREYYS--EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAV 145
Query: 503 -LSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
L+ ++ F + Y LSPEVL + + Y + DI++ G+ L
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGY----LSPEVLRK--EAYGKPVDIWACGVILYIL 199
Query: 562 ANGTVPFAETPTTLMLIEKLAGA 584
G PF + + + AGA
Sbjct: 200 LVGYPPFWDEDQHKLYQQIKAGA 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 347 FNSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS 406
F V+ + +++I ++G+ V + K K T ++ A+K N M LK
Sbjct: 78 FTQLVKEMQLHREDFEIIKVIGR--GAFGEVAVVKMKNTERIYAMKILNKWEM----LK- 130
Query: 407 LHHEIVCMRHLRH-------PNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNF 457
E C R R I +F D L+LV M + DL+ + F
Sbjct: 131 -RAETACFREERDVLVNGDCQWITALHYAFQDENHLYLV---MDYYVGGDLLTLLSKFED 186
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR---YMCPFSP 514
LPE + + +++ ++ IH ++HR +K ++L+ NG L+ M
Sbjct: 187 KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 246
Query: 515 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPF 568
+ V + P +++SPE+L+ DG Y D +S+G+ E+ G PF
Sbjct: 247 VQSSVAVGTP------DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 32/225 (14%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
+++I ++G+ V + K K T ++ A+K N M LK E C R R
Sbjct: 90 EDFEIIKVIGR--GAFGEVAVVKMKNTERIYAMKILNKWEM----LK--RAETACFREER 141
Query: 69 H-------PNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVICHILQ 119
I +F D L+LV M + DL+ + F LPE + +
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLV---MDYYVGGDLLTLLSKFEDKLPEDMARFYIG 198
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR---YMCPFSPTKKKVHLFPPST 176
+++ ++ IH ++HR +K ++L+ NG L+ M + V + P
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP-- 256
Query: 177 AYNLNWLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPF 218
+++SPE+L+ DG Y D +S+G+ E+ G PF
Sbjct: 257 ----DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 79 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 137
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 138 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 195
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 196 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 241
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 79 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 137
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 138 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 195
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 196 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 32/237 (13%)
Query: 347 FNSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS 406
F V+ + +++I ++G+ V + K K T ++ A+K N M LK
Sbjct: 62 FTQLVKEMQLHREDFEIIKVIGR--GAFGEVAVVKMKNTERIYAMKILNKWEM----LK- 114
Query: 407 LHHEIVCMRHLRH-------PNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNF 457
E C R R I +F D L+LV M + DL+ + F
Sbjct: 115 -RAETACFREERDVLVNGDCQWITALHYAFQDENHLYLV---MDYYVGGDLLTLLSKFED 170
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR---YMCPFSP 514
LPE + + +++ ++ IH ++HR +K ++L+ NG L+ M
Sbjct: 171 KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 230
Query: 515 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPF 568
+ V + P +++SPE+L+ DG Y D +S+G+ E+ G PF
Sbjct: 231 VQSSVAVGTP------DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 32/225 (14%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
+++I ++G+ V + K K T ++ A+K N M LK E C R R
Sbjct: 74 EDFEIIKVIGR--GAFGEVAVVKMKNTERIYAMKILNKWEM----LK--RAETACFREER 125
Query: 69 H-------PNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVICHILQ 119
I +F D L+LV M + DL+ + F LPE + +
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLV---MDYYVGGDLLTLLSKFEDKLPEDMARFYIG 182
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR---YMCPFSPTKKKVHLFPPST 176
+++ ++ IH ++HR +K ++L+ NG L+ M + V + P
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP-- 240
Query: 177 AYNLNWLSPEVLEQNLDG---YDERSDIYSVGISCCELANGTVPF 218
+++SPE+L+ DG Y D +S+G+ E+ G PF
Sbjct: 241 ----DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 53 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 111
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 112 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 169
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 170 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 215
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 53 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 111
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 112 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 169
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 170 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDAEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 215 TVPF 218
+P+
Sbjct: 208 RIPY 211
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDAEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 565 TVPF 568
+P+
Sbjct: 208 RIPY 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 48 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 106
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 107 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 165 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 210
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 48 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 106
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 107 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 165 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 17 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 71
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 72 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 115
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 172
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 209 TY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 267 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 367 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 421
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 422 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 465
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 522
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 209 TY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 267 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 17 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 71
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 72 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 115
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 172
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 155 TY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 213 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 256
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 367 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 421
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 422 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 465
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 522
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 155 TY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 213 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 109
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 109
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 109
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 109
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 8 PSNYKICSILGQC-FNNLSSVYLSKHKVTNQLIAVK--KFNLDRMTDEDLKSLHHEIVCM 64
P +++ +LG+ + + V T ++ A+K K + +D E +
Sbjct: 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 65 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 124
++HP I+ I +F L+L+ + G + F E C L ++
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF--MEDTACFYLAEISMA 133
Query: 125 LEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNW 182
L ++H KG I+R +K +I+++H G L+ F K+ +H + + + +
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTD------FGLCKESIHDGTVTHXFCGTIEY 187
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++PE+L ++ G++ D +S+G ++ G PF
Sbjct: 188 MAPEILMRS--GHNRAVDWWSLGALMYDMLTGAPPF 221
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 358 PSNYKICSILGQC-FNNLSSVYLSKHKVTNQLIAVK--KFNLDRMTDEDLKSLHHEIVCM 414
P +++ +LG+ + + V T ++ A+K K + +D E +
Sbjct: 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 415 RHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNG 474
++HP I+ I +F L+L+ + G + F E C L ++
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF--MEDTACFYLAEISMA 133
Query: 475 LEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNW 532
L ++H KG I+R +K +I+++H G L+ F K+ +H + + + +
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTD------FGLCKESIHDGTVTHXFCGTIEY 187
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE+L ++ G++ D +S+G ++ G PF
Sbjct: 188 MAPEILMRS--GHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
Query: 17 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 71
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 72 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 115
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 172
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 152 TY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 210 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 254
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
Query: 367 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 421
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 422 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 465
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 522
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 152 TY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 210 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 17 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 71
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 72 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 115
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 172
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 150 TY--QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 208 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 251
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 367 LGQ-CFNNL---SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPN 421
LG+ CF + +V + K K + K D T++DL L E+ M+ + +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 422 IICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVIC 465
II + + L+++ G+ ++ + A G+ PE LV C
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLF 522
+ G+EY+ + IHR + A ++L++ N K GL R + KK +
Sbjct: 150 TY--QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
P + W++PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 208 LP-----VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 251
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 54 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 112
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 113 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 170
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 171 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 216
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 54 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 112
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 113 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 170
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 171 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 46 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 101
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 161
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 162 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 215 TVPF 218
+P+
Sbjct: 214 RIPY 217
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 46 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 101
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 161
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 162 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 565 TVPF 568
+P+
Sbjct: 214 RIPY 217
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 347 FNSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS 406
F S V+ + +++I ++G+ V + K K +++ A+K N M LK
Sbjct: 62 FTSKVKQMRLHREDFEILKVIGR--GAFGEVAVVKLKNADKVFAMKILNKWEM----LK- 114
Query: 407 LHHEIVCMRHLRH-------PNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNF 457
E C R R I +F D +L+LV M + DL+ + F
Sbjct: 115 -RAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV---MDYYVGGDLLTLLSKFED 170
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR---YMCPFSP 514
LPE + L +++ ++ +H ++HR +K +IL+ NG L+ +
Sbjct: 171 RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
Query: 515 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDG----YDERSDIYSVGISCCELANGTVPF 568
+ V + P +++SPE+L Q ++G Y D +S+G+ E+ G PF
Sbjct: 231 VQSSVAVGTP------DYISPEIL-QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+++I ++G+ V + K K +++ A+K N M LK E C R R
Sbjct: 75 DFEILKVIGR--GAFGEVAVVKLKNADKVFAMKILNKWEM----LK--RAETACFREERD 126
Query: 70 -------PNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVICHILQD 120
I +F D +L+LV M + DL+ + F LPE + L +
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLV---MDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR---YMCPFSPTKKKVHLFPPSTA 177
++ ++ +H ++HR +K +IL+ NG L+ + + V + P
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP--- 240
Query: 178 YNLNWLSPEVLEQNLDG----YDERSDIYSVGISCCELANGTVPF 218
+++SPE+L Q ++G Y D +S+G+ E+ G PF
Sbjct: 241 ---DYISPEIL-QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 56 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 114
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 115 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 173 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 218
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + ++
Sbjct: 56 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLD 114
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S N L GL RYM +
Sbjct: 115 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 173 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 27 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDL 85
VY +K +++A+K+ LD DE + S EI ++ L HPNI+ I L
Sbjct: 37 VYKAKDS-QGRIVALKRIRLD-AEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 86 HLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 145
LV M K +++ + GL + I L +L G+ + H +HR +K ++LI
Sbjct: 95 TLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152
Query: 146 SHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ +G L+ F P + H L + +P+VL Y DI+S+
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVL-MGSKKYSTSVDIWSI 206
Query: 205 GISCCELANGTVPF 218
G E+ G F
Sbjct: 207 GCIFAEMITGKPLF 220
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 377 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDL 435
VY +K +++A+K+ LD DE + S EI ++ L HPNI+ I L
Sbjct: 37 VYKAKDS-QGRIVALKRIRLD-AEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 436 HLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 495
LV M K +++ + GL + I L +L G+ + H +HR +K ++LI
Sbjct: 95 TLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152
Query: 496 SHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
+ +G L+ F P + H L + +P+VL Y DI+S+
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVL-MGSKKYSTSVDIWSI 206
Query: 555 GISCCELANGTVPF 568
G E+ G F
Sbjct: 207 GCIFAEMITGKPLF 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 27 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDL 85
VY +K +++A+K+ LD DE + S EI ++ L HPNI+ I L
Sbjct: 37 VYKAKDS-QGRIVALKRIRLD-AEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 86 HLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 145
LV M K +++ + GL + I L +L G+ + H +HR +K ++LI
Sbjct: 95 TLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152
Query: 146 SHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ +G L+ F P + H L + +P+VL Y DI+S+
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVL-MGSKKYSTSVDIWSI 206
Query: 205 GISCCELANGTVPF 218
G E+ G F
Sbjct: 207 GCIFAEMITGKPLF 220
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 12/194 (6%)
Query: 377 VYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH-HEIVCMRHLRHPNIICYISSFLDATDL 435
VY +K +++A+K+ LD DE + S EI ++ L HPNI+ I L
Sbjct: 37 VYKAKDS-QGRIVALKRIRLD-AEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 436 HLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 495
LV M K +++ + GL + I L +L G+ + H +HR +K ++LI
Sbjct: 95 TLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152
Query: 496 SHNGKACLSGLRYMCPFS-PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
+ +G L+ F P + H L + +P+VL Y DI+S+
Sbjct: 153 NSDGALKLADFGLARAFGIPVRSYTH-----EVVTLWYRAPDVL-MGSKKYSTSVDIWSI 206
Query: 555 GISCCELANGTVPF 568
G E+ G F
Sbjct: 207 GCIFAEMITGKPLF 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 33 KVTNQLIAVKKFN----LDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLV 88
K T ++ K N LD+ T + +EI M L HP +I +F D ++ L+
Sbjct: 73 KATGRVFVAKFINTPYPLDKYT------VKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126
Query: 89 SPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN 148
+ G D I A ++ + E + + ++ GL+++H +H +K +I+
Sbjct: 127 LEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK 185
Query: 149 GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISC 208
+ + + + ++ +TA + +PE++++ G+ +D++++G+
Sbjct: 186 KASSVKIIDFGLATKLNPDEIVKVTTATA---EFAAPEIVDREPVGF--YTDMWAIGVLG 240
Query: 209 CELANGTVPFA 219
L +G PFA
Sbjct: 241 YVLLSGLSPFA 251
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 383 KVTNQLIAVKKFN----LDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLV 438
K T ++ K N LD+ T + +EI M L HP +I +F D ++ L+
Sbjct: 73 KATGRVFVAKFINTPYPLDKYT------VKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126
Query: 439 SPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN 498
+ G D I A ++ + E + + ++ GL+++H +H +K +I+
Sbjct: 127 LEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK 185
Query: 499 GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISC 558
+ + + + ++ +TA + +PE++++ G+ +D++++G+
Sbjct: 186 KASSVKIIDFGLATKLNPDEIVKVTTATA---EFAAPEIVDREPVGF--YTDMWAIGVLG 240
Query: 559 CELANGTVPFA 569
L +G PFA
Sbjct: 241 YVLLSGLSPFA 251
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 48 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 103
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGL 156
D + L + + + G+ +I + +IHR ++A++IL+S + K GL
Sbjct: 104 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 163
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 164 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 215 TVPF 218
+P+
Sbjct: 216 RIPY 219
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 48 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 103
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH--NGKACLSGL 506
D + L + + + G+ +I + +IHR ++A++IL+S + K GL
Sbjct: 104 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 163
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 164 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 565 TVPF 568
+P+
Sbjct: 216 RIPY 219
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 6 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKF--NLDRMTDEDLKSLHHEIV 62
+V Y+I +G + +SS ++ ++T Q +A+KK D +T+ K E+
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSS---ARRRLTGQQVAIKKIPNAFDVVTNA--KRTLRELK 105
Query: 63 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK------DLINA------HFNFGLP 110
++H +H NII ++ P + +G K DL+ + H + L
Sbjct: 106 ILKHFKHDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLT 156
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL---RYMCPFSPTKK 167
+ + L +L GL+Y+H IHR +K S++L++ N + + R +C T
Sbjct: 157 LEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC----TSP 212
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 205
H + + W L +L Y + D++SVG
Sbjct: 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 356 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKF--NLDRMTDEDLKSLHHEIV 412
+V Y+I +G + +SS ++ ++T Q +A+KK D +T+ K E+
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSS---ARRRLTGQQVAIKKIPNAFDVVTNA--KRTLRELK 105
Query: 413 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK------DLINA------HFNFGLP 460
++H +H NII ++ P + +G K DL+ + H + L
Sbjct: 106 ILKHFKHDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLT 156
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL---RYMCPFSPTKK 517
+ + L +L GL+Y+H IHR +K S++L++ N + + R +C T
Sbjct: 157 LEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC----TSP 212
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 555
H + + W L +L Y + D++SVG
Sbjct: 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLV 88
+ K +++ K+ + MT+ + + L E+ +R L+HPNI+ Y +D T+ L++V
Sbjct: 26 RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 89 SPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIH-----GKGFIHRAVKAS 141
G +I L E + ++ + L+ H G +HR +K +
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 142 HILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 199
++ + N K GL + K + P ++SPE + N Y+E+S
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPY------YMSPE--QMNRMSYNEKS 197
Query: 200 DIYSVGISCCELANGTVPFA 219
DI+S+G EL PF
Sbjct: 198 DIWSLGCLLYELCALMPPFT 217
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATD--LHLV 438
+ K +++ K+ + MT+ + + L E+ +R L+HPNI+ Y +D T+ L++V
Sbjct: 26 RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85
Query: 439 SPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGLEYIH-----GKGFIHRAVKAS 491
G +I L E + ++ + L+ H G +HR +K +
Sbjct: 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 492 HILI--SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 549
++ + N K GL + K + P ++SPE + N Y+E+S
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPY------YMSPE--QMNRMSYNEKS 197
Query: 550 DIYSVGISCCELANGTVPFA 569
DI+S+G EL PF
Sbjct: 198 DIWSLGCLLYELCALMPPFT 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 41 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 96
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 97 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 156
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 157 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 215 TVPF 218
+P+
Sbjct: 209 RIPY 212
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 41 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 96
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 97 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 156
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 157 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 565 TVPF 568
+P+
Sbjct: 209 RIPY 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 52 EDLKSLHHEIVCMRHLRHPNIICYISSFLDAT----DLHLVSPLMGFGSCKDLINAHFNF 107
+D + E R HPNI+ ++ L + L+ P G+ + I +
Sbjct: 68 QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDK 127
Query: 108 G--LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYM---CPF 162
G L E I +L + GLE IH KG+ HR +K ++IL+ G+ L L M C
Sbjct: 128 GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187
Query: 163 SPTKKKVHLFPPSTAYN--LNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 218
++ A +++ +PE+ Q+ DER+D++S+G + G P+
Sbjct: 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 402 EDLKSLHHEIVCMRHLRHPNIICYISSFLDAT----DLHLVSPLMGFGSCKDLINAHFNF 457
+D + E R HPNI+ ++ L + L+ P G+ + I +
Sbjct: 68 QDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDK 127
Query: 458 G--LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYM---CPF 512
G L E I +L + GLE IH KG+ HR +K ++IL+ G+ L L M C
Sbjct: 128 GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187
Query: 513 SPTKKKVHLFPPSTAYN--LNWLSPEVLE-QNLDGYDERSDIYSVGISCCELANGTVPF 568
++ A +++ +PE+ Q+ DER+D++S+G + G P+
Sbjct: 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 215 TVPF 218
+P+
Sbjct: 208 RIPY 211
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 565 TVPF 568
+P+
Sbjct: 208 RIPY 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 215 TVPF 218
+P+
Sbjct: 208 RIPY 211
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 565 TVPF 568
+P+
Sbjct: 208 RIPY 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 49 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 104
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 105 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 164
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 165 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 215 TVPF 218
+P+
Sbjct: 217 RIPY 220
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 49 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 104
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 105 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 164
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 165 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 565 TVPF 568
+P+
Sbjct: 217 RIPY 220
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 222
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETP 572
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
++L++ + K GL R + KK + P + W++PE L + Y +
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP-----VKWMAPEALFDRI--YTHQ 232
Query: 199 SDIYSVGISCCELAN-GTVPFAETPT 223
SD++S G+ E+ G P+ P
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPV 258
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
++L++ + K GL R + KK + P + W++PE L + Y +
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP-----VKWMAPEALFDRI--YTHQ 232
Query: 549 SDIYSVGISCCELAN-GTVPFAETPT 573
SD++S G+ E+ G P+ P
Sbjct: 233 SDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 42 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 97
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 98 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 157
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 158 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 215 TVPF 218
+P+
Sbjct: 210 RIPY 213
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 42 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 97
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 98 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 157
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 158 ARLIEDNEXTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 565 TVPF 568
+P+
Sbjct: 210 RIPY 213
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 34/181 (18%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 149 ----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
G A +G +M P + +PEV+ GY E DI+SV
Sbjct: 167 ILDFGLARTAGTSFM------------MEPEVVTRY-YRAPEVILGM--GYKENVDIWSV 211
Query: 205 G 205
G
Sbjct: 212 G 212
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 34/181 (18%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 499 ----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
G A +G +M P + +PEV+ GY E DI+SV
Sbjct: 167 ILDFGLARTAGTSFM------------MEPEVVTRY-YRAPEVILGM--GYKENVDIWSV 211
Query: 555 G 555
G
Sbjct: 212 G 212
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Query: 59 HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHI 117
E + MR HP+I+ I + + ++ L G + + F+ L L++
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 118 LQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPP 174
+ L Y+ K F+HR + A ++L+S L GL RYM + K P
Sbjct: 499 --QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP- 555
Query: 175 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
+ W++PE + N + SD++ G+ E L +G PF
Sbjct: 556 -----IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Query: 409 HEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHI 467
E + MR HP+I+ I + + ++ L G + + F+ L L++
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 498
Query: 468 LQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPP 524
+ L Y+ K F+HR + A ++L+S L GL RYM + K P
Sbjct: 499 --QLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP- 555
Query: 525 STAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
+ W++PE + N + SD++ G+ E L +G PF
Sbjct: 556 -----IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K + + Y L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA---KRVKGRTWXLXGTPEY----LAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K + + Y L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA---KRVKGRTWXLXGTPEY----LAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKETGNHFAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 53 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 111
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ + F + +LV +L+ + G++Y+ G++HR + A +ILI+ N
Sbjct: 112 TFLKKNDGQFTVIQLV--GMLRGISAGMKYLSDMGYVHRDLAARNILINSN--------- 160
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W +PE + + SD++S GI
Sbjct: 161 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMW 218
Query: 210 ELAN-GTVPFAE 220
E+ + G P+ E
Sbjct: 219 EVVSYGERPYWE 230
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K + T++ + E M HPNII + + +V+ M GS
Sbjct: 53 VAIKTLKVG-YTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 111
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ + F + +LV +L+ + G++Y+ G++HR + A +ILI+ N
Sbjct: 112 TFLKKNDGQFTVIQLV--GMLRGISAGMKYLSDMGYVHRDLAARNILINSN--------- 160
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W +PE + + SD++S GI
Sbjct: 161 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMW 218
Query: 560 ELAN-GTVPFAE 570
E+ + G P+ E
Sbjct: 219 EVVSYGERPYWE 230
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 6 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKF--NLDRMTDEDLKSLHHEIV 62
+V Y+I +G + +SS ++ ++T Q +A+KK D +T+ K E+
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSS---ARRRLTGQQVAIKKIPNAFDVVTNA--KRTLRELK 106
Query: 63 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK------DLINA------HFNFGLP 110
++H +H NII ++ P + +G K DL+ + H + L
Sbjct: 107 ILKHFKHDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLT 157
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL---RYMCPFSPTKK 167
+ + L +L GL+Y+H IHR +K S++L++ N + + R +C T
Sbjct: 158 LEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC----TSP 213
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 205
H + + W L +L Y + D++SVG
Sbjct: 214 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 251
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 356 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKF--NLDRMTDEDLKSLHHEIV 412
+V Y+I +G + +SS ++ ++T Q +A+KK D +T+ K E+
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSS---ARRRLTGQQVAIKKIPNAFDVVTNA--KRTLRELK 106
Query: 413 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK------DLINA------HFNFGLP 460
++H +H NII ++ P + +G K DL+ + H + L
Sbjct: 107 ILKHFKHDNIIAIKD---------ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLT 157
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL---RYMCPFSPTKK 517
+ + L +L GL+Y+H IHR +K S++L++ N + + R +C T
Sbjct: 158 LEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC----TSP 213
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 555
H + + W L +L Y + D++SVG
Sbjct: 214 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 251
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 45/259 (17%)
Query: 3 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD---EDLKSLHH 59
+L + Y + +GQ + V ++ T + A+K N +++ +D++ +
Sbjct: 20 SLLELQKKYHLKGAIGQ--GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 60 EIVCMRHLRHPNIICYISSFLDATDL----------HLVSPLMGF-----GSC------- 97
E+ M+ L HPNI + D + HL+ L F G C
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 98 ---------KDLINAH-------FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ IN +F E +I +I++ + + L Y+H +G HR +K
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 142 HILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 199
+ L S N + L F + + A +++PEVL + Y +
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 200 DIYSVGISCCELANGTVPF 218
D +S G+ L G VPF
Sbjct: 258 DAWSAGVLLHLLLMGAVPF 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 45/259 (17%)
Query: 353 TLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD---EDLKSLHH 409
+L + Y + +GQ + V ++ T + A+K N +++ +D++ +
Sbjct: 20 SLLELQKKYHLKGAIGQ--GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 410 EIVCMRHLRHPNIICYISSFLDATDL----------HLVSPLMGF-----GSC------- 447
E+ M+ L HPNI + D + HL+ L F G C
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 448 ---------KDLINAH-------FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ IN +F E +I +I++ + + L Y+H +G HR +K
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 492 HILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS 549
+ L S N + L F + + A +++PEVL + Y +
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 550 DIYSVGISCCELANGTVPF 568
D +S G+ L G VPF
Sbjct: 258 DAWSAGVLLHLLLMGAVPF 276
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 46 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 101
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 161
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 162 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 215 TVPF 218
+P+
Sbjct: 214 RIPY 217
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 46 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 101
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 161
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 162 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 565 TVPF 568
+P+
Sbjct: 214 RIPY 217
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 73 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 188
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V + +L+PE++ GY++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFA-------KRVKGATWTLCGTPEYLAPEIILSK--GYNKA 239
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQI 267
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 73 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 188
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V + +L+PE++ GY++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFA-------KRVKGATWTLCGTPEYLAPEIILSK--GYNKA 239
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQI 267
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
+D + E + MR HP+I+ I + + ++ L G + + F+
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLD 109
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 165
L L++ + L Y+ K F+HR + A ++L+S L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 167
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
+D + E + MR HP+I+ I + + ++ L G + + F+
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLD 109
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPT 515
L L++ + L Y+ K F+HR + A ++L+S L GL RYM +
Sbjct: 110 LASLIL--YAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 167
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
K P + W++PE + N + SD++ G+ E L +G PF
Sbjct: 168 KASKGKLP------IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 215 TVPF 218
+P+
Sbjct: 208 RIPY 211
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 40 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 95
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 155
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 156 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 565 TVPF 568
+P+
Sbjct: 208 RIPY 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 45 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 100
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 101 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 160
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 161 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 215 TVPF 218
+P+
Sbjct: 213 RIPY 216
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 45 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 100
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 101 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 160
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 161 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 565 TVPF 568
+P+
Sbjct: 213 RIPY 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 50 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLV 105
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 106 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 165
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 166 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 215 TVPF 218
+P+
Sbjct: 218 RIPY 221
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 50 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLV 105
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 106 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 165
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 166 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 565 TVPF 568
+P+
Sbjct: 218 RIPY 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 35 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 90
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 91 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 150
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 151 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 202
Query: 215 TVPF 218
+P+
Sbjct: 203 RIPY 206
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 35 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 90
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 91 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGL 150
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 151 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 202
Query: 565 TVPF 568
+P+
Sbjct: 203 RIPY 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 36 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 91
Query: 99 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 156
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 92 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGL 151
Query: 157 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 214
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 152 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 203
Query: 215 TVPF 218
+P+
Sbjct: 204 RIPY 207
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+AVK M+ + + E M+ L+H ++ + + + +++++ M GS
Sbjct: 36 VAVKSLKQGSMSPD---AFLAEANLMKQLQHQRLV-RLYAVVTQEPIYIITEYMENGSLV 91
Query: 449 DLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL 506
D + L + + + G+ +I + +IHR ++A++IL+S ++ GL
Sbjct: 92 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGL 151
Query: 507 -RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-G 564
R + T ++ FP + W +PE + N + +SD++S GI E+ G
Sbjct: 152 ARLIEDNEYTAREGAKFP------IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHG 203
Query: 565 TVPF 568
+P+
Sbjct: 204 RIPY 207
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 175
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T + FP
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFP-- 169
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 231
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 170 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 232 AGATPHLLDCTTYYV 246
PHL Y +
Sbjct: 224 RLYRPHLASEKVYTI 238
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 525
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T + FP
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFP-- 169
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 581
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 170 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 582 AGATPHLLDCTTYYV 596
PHL Y +
Sbjct: 224 RLYRPHLASEKVYTI 238
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 12/209 (5%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHLRH 69
Y I LG+ + V L+ H T Q +A+K + + D+ + EI ++ LRH
Sbjct: 11 YIIRETLGE--GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
P+II TD+ +V G G D I + E Q ++ +EY H
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCH 125
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE 189
+HR +K ++L+ N ++ + F ++ + N+ +PEV+
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-----FLKTSCGSPNYAAPEVIN 180
Query: 190 QNLDGYDERSDIYSVGISCCELANGTVPF 218
L E D++S GI + G +PF
Sbjct: 181 GKLYAGPE-VDVWSCGIVLYVMLVGRLPF 208
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 12/209 (5%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDL-KSLHHEIVCMRHLRH 419
Y I LG+ + V L+ H T Q +A+K + + D+ + EI ++ LRH
Sbjct: 11 YIIRETLGE--GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
P+II TD+ +V G G D I + E Q ++ +EY H
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCH 125
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLE 539
+HR +K ++L+ N ++ + F ++ + N+ +PEV+
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-----FLKTSCGSPNYAAPEVIN 180
Query: 540 QNLDGYDERSDIYSVGISCCELANGTVPF 568
L E D++S GI + G +PF
Sbjct: 181 GKLYAGPE-VDVWSCGIVLYVMLVGRLPF 208
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 24/210 (11%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 68
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 69 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
L GL+YIH +HR +K S++L++ + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW- 192
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PE++ N GY + DI+SVG E+
Sbjct: 193 YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 24/210 (11%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR-------- 418
+G + NLS Y+ + A N R+ + + H+ C R LR
Sbjct: 21 VGPRYTNLS--YIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF 78
Query: 419 -HPNIICYISSFLDA------TDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
H NII I+ + A D+++V LM K L H L IC+ L +
Sbjct: 79 RHENIIG-INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQI 133
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
L GL+YIH +HR +K S++L++ + P A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW- 192
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PE++ N GY + DI+SVG E+
Sbjct: 193 YRAPEIM-LNSKGYTKSIDIWSVGCILAEM 221
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 48 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 164
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 197
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 165 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 216
Query: 198 RSDIYSVGISCCELAN-GTVPFAETPT 223
+SD++S G+ E+ G P+ P
Sbjct: 217 QSDVWSFGVLLWEIFTLGGSPYPGVPV 243
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 48 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 164
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 547
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 165 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 216
Query: 548 RSDIYSVGISCCELAN-GTVPFAETPT 573
+SD++S G+ E+ G P+ P
Sbjct: 217 QSDVWSFGVLLWEIFTLGGSPYPGVPV 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 197
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 180 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 231
Query: 198 RSDIYSVGISCCELAN-GTVPFAETPT 223
+SD++S G+ E+ G P+ P
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 547
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 180 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 231
Query: 548 RSDIYSVGISCCELAN-GTVPFAETPT 573
+SD++S G+ E+ G P+ P
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 52 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 168
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 197
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 169 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 220
Query: 198 RSDIYSVGISCCELAN-GTVPFAETPT 223
+SD++S G+ E+ G P+ P
Sbjct: 221 QSDVWSFGVLLWEIFTLGGSPYPGVPV 247
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 52 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 168
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 547
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 169 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 220
Query: 548 RSDIYSVGISCCELAN-GTVPFAETPT 573
+SD++S G+ E+ G P+ P
Sbjct: 221 QSDVWSFGVLLWEIFTLGGSPYPGVPV 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 55 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 171
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 197
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 172 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 223
Query: 198 RSDIYSVGISCCELAN-GTVPFAETPT 223
+SD++S G+ E+ G P+ P
Sbjct: 224 QSDVWSFGVLLWEIFTLGGSPYPGVPV 250
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 55 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 171
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 547
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 172 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 223
Query: 548 RSDIYSVGISCCELAN-GTVPFAETPT 573
+SD++S G+ E+ G P+ P
Sbjct: 224 QSDVWSFGVLLWEIFTLGGSPYPGVPV 250
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 104 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 220
Query: 142 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
++L++ + K GL R + KK + P + W++PE L + Y +
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-----VKWMAPEALFDRI--YTHQ 273
Query: 199 SDIYSVGISCCELAN-GTVPFAETPT 223
SD++S G+ E+ G P+ P
Sbjct: 274 SDVWSFGVLLWEIFTLGGSPYPGVPV 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 104 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 220
Query: 492 HILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
++L++ + K GL R + KK + P + W++PE L + Y +
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-----VKWMAPEALFDRI--YTHQ 273
Query: 549 SDIYSVGISCCELAN-GTVPFAETPT 573
SD++S G+ E+ G P+ P
Sbjct: 274 SDVWSFGVLLWEIFTLGGSPYPGVPV 299
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 56 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 172
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 197
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 173 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 224
Query: 198 RSDIYSVGISCCELAN-GTVPFAETPT 223
+SD++S G+ E+ G P+ P
Sbjct: 225 QSDVWSFGVLLWEIFTLGGSPYPGVPV 251
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 56 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 172
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 547
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 173 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 224
Query: 548 RSDIYSVGISCCELAN-GTVPFAETPT 573
+SD++S G+ E+ G P+ P
Sbjct: 225 QSDVWSFGVLLWEIFTLGGSPYPGVPV 251
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 15/202 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
N V+ + + N L+AVK D K L E ++ HPNI+ I
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ-EARILKQYSHPNIVRLIGVCTQ 183
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
+++V L+ G + L + ++ D G+EY+ K IHR + A
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAAR 242
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVH-LFPPSTAYN---LNWLSPEVLEQNLDGYDE 197
+ L++ +S F ++++ ++ S + W +PE L N Y
Sbjct: 243 NCLVTEKNVLKISD------FGMSREEADGVYAASGGLRQVPVKWTAPEAL--NYGRYSS 294
Query: 198 RSDIYSVGISCCE-LANGTVPF 218
SD++S GI E + G P+
Sbjct: 295 ESDVWSFGILLWETFSLGASPY 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 15/202 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ + + N L+AVK D K L E ++ HPNI+ I
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ-EARILKQYSHPNIVRLIGVCTQ 183
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
+++V L+ G + L + ++ D G+EY+ K IHR + A
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAAR 242
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVH-LFPPSTAYN---LNWLSPEVLEQNLDGYDE 547
+ L++ +S F ++++ ++ S + W +PE L N Y
Sbjct: 243 NCLVTEKNVLKISD------FGMSREEADGVYAASGGLRQVPVKWTAPEAL--NYGRYSS 294
Query: 548 RSDIYSVGISCCE-LANGTVPF 568
SD++S GI E + G P+
Sbjct: 295 ESDVWSFGILLWETFSLGASPY 316
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N ++ GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 30/220 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N ++ GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 45 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 102
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 160
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 161 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 211
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQI 239
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 45 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 102
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 160
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 161 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 211
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQI 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 197
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 180 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 231
Query: 198 RSDIYSVGISCCELAN-GTVPFAETPT 223
+SD++S G+ E+ G P+ P
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 547
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 180 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 231
Query: 548 RSDIYSVGISCCELAN-GTVPFAETPT 573
+SD++S G+ E+ G P+ P
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
N V+ + + N L+AVK D K L E ++ HPNI+ I
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ-EARILKQYSHPNIVRLIGVCTQ 183
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
+++V L+ G + L + ++ D G+EY+ K IHR + A
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAAR 242
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTA----YNLNWLSPEVLEQNLDGYDE 197
+ L++ +S F ++++ ++ + W +PE L N Y
Sbjct: 243 NCLVTEKNVLKISD------FGMSREEADGVXAASGGLRQVPVKWTAPEAL--NYGRYSS 294
Query: 198 RSDIYSVGISCCE-LANGTVPF 218
SD++S GI E + G P+
Sbjct: 295 ESDVWSFGILLWETFSLGASPY 316
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 15/202 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
N V+ + + N L+AVK D K L E ++ HPNI+ I
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ-EARILKQYSHPNIVRLIGVCTQ 183
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
+++V L+ G + L + ++ D G+EY+ K IHR + A
Sbjct: 184 KQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAAR 242
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTA----YNLNWLSPEVLEQNLDGYDE 547
+ L++ +S F ++++ ++ + W +PE L N Y
Sbjct: 243 NCLVTEKNVLKISD------FGMSREEADGVXAASGGLRQVPVKWTAPEAL--NYGRYSS 294
Query: 548 RSDIYSVGISCCE-LANGTVPF 568
SD++S GI E + G P+
Sbjct: 295 ESDVWSFGILLWETFSLGASPY 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 73 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 131 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 188
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 239
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQI 267
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 73 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 131 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 188
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 239
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQI 267
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEIVCMRHL 67
N++ +LG+ + V L++ K T L AVK D + D+D++ E +
Sbjct: 23 DNFEFIRVLGK--GSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 68 R-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
R HP + F L V + G I F E ++++ L
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD--EARARFYAAEIISALM 138
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV--HLFPPSTAYNLNWLS 184
++H KG I+R +K ++L+ H G L+ MC K+ + + + ++++
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFG-MC-----KEGICNGVTTATFCGTPDYIA 192
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+L++ L Y D +++G+ E+ G PF
Sbjct: 193 PEILQEML--YGPAVDWWAMGVLLYEMLCGHAPF 224
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEIVCMRHL 417
N++ +LG+ + V L++ K T L AVK D + D+D++ E +
Sbjct: 23 DNFEFIRVLGK--GSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 418 R-HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
R HP + F L V + G I F E ++++ L
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD--EARARFYAAEIISALM 138
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV--HLFPPSTAYNLNWLS 534
++H KG I+R +K ++L+ H G L+ MC K+ + + + ++++
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFG-MC-----KEGICNGVTTATFCGTPDYIA 192
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L++ L Y D +++G+ E+ G PF
Sbjct: 193 PEILQEML--YGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADEPIQI 246
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADEPIQI 246
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 19/217 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 39 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 96
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 97 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 154
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 155 KPENLLIDEQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 205
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTLMLIEKLAGA 234
D +++G+ E+A G P FA+ P + + EK+
Sbjct: 206 VDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSG 240
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 19/217 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 39 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 96
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 97 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 154
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 155 KPENLLIDEQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 205
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTLMLIEKLAGA 584
D +++G+ E+A G P FA+ P + + EK+
Sbjct: 206 VDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSG 240
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 34/181 (18%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 92
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 148
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 149 ----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
G A +G +M P + +PEV+ GY E D++SV
Sbjct: 167 ILDFGLARTAGTSFM------------MEPEVVTRY-YRAPEVILGM--GYKENVDLWSV 211
Query: 205 G 205
G
Sbjct: 212 G 212
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 34/181 (18%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL------DATDLHLVSPLM 442
+A+KK + K + E+V M+ + H NII ++ F + D+++V LM
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHN---- 498
C+ + L + ++L +L G++++H G IHR +K S+I++ +
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 499 ----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
G A +G +M P + +PEV+ GY E D++SV
Sbjct: 167 ILDFGLARTAGTSFM------------MEPEVVTRY-YRAPEVILGM--GYKENVDLWSV 211
Query: 555 G 555
G
Sbjct: 212 G 212
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 97
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 98 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 197
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 180 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 231
Query: 198 RSDIYSVGISCCELAN-GTVPFAETPT 223
+SD++S G+ E+ G P+ P
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLVSPLMGFGSC 447
+AVK D T++DL L E+ M+ + +H NII + + L+++ G+
Sbjct: 63 VAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 448 KDLINAHFNFGL---------PE-------LVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
++ + A GL PE LV C V G+EY+ K IHR + A
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAY--QVARGMEYLASKKCIHRDLAAR 179
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHL--FPPSTAYNL--NWLSPEVLEQNLDGYDE 547
++L++ + + + F + H+ + +T L W++PE L + Y
Sbjct: 180 NVLVTED------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI--YTH 231
Query: 548 RSDIYSVGISCCELAN-GTVPFAETPT 573
+SD++S G+ E+ G P+ P
Sbjct: 232 QSDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 13/215 (6%)
Query: 12 KICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
KI ++G F + S +L +A+K T++ + E M HP
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHP 68
Query: 71 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHILQDVLNGLEYIH 129
N+I +T + +++ M GS + + F + +LV +L+ + G++Y+
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV--GMLRGIAAGMKYLA 126
Query: 130 GKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
++HRA+ A +IL++ N K GL R++ T + + W +PE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGGKIPIRWTAPE 184
Query: 187 VLEQNLDGYDERSDIYSVGISCCE-LANGTVPFAE 220
++ + SD++S GI E ++ G P+ +
Sbjct: 185 AIQYR--KFTSASDVWSYGIVMWEVMSYGERPYWD 217
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 13/215 (6%)
Query: 362 KICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
KI ++G F + S +L +A+K T++ + E M HP
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHP 68
Query: 421 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHILQDVLNGLEYIH 479
N+I +T + +++ M GS + + F + +LV +L+ + G++Y+
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV--GMLRGIAAGMKYLA 126
Query: 480 GKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
++HRA+ A +IL++ N K GL R++ T + + W +PE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGGKIPIRWTAPE 184
Query: 537 VLEQNLDGYDERSDIYSVGISCCE-LANGTVPFAE 570
++ + SD++S GI E ++ G P+ +
Sbjct: 185 AIQYR--KFTSASDVWSYGIVMWEVMSYGERPYWD 217
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 102
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 160
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 161 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 211
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQI 239
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 102
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 103 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 160
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 161 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 211
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQI 239
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 24/190 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K T+ + E M HPNII +V+ M GS
Sbjct: 80 VAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 157
+ H F + +LV +L+ V G+ Y+ G++HR + A ++L+ N
Sbjct: 139 TFLRTHDGQFTIMQLV--GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN--------- 187
Query: 158 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 209
+C S +V P AY + W +PE + + SD++S G+
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMW 245
Query: 210 E-LANGTVPF 218
E LA G P+
Sbjct: 246 EVLAYGERPY 255
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 24/190 (12%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K T+ + E M HPNII +V+ M GS
Sbjct: 80 VAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
+ H F + +LV +L+ V G+ Y+ G++HR + A ++L+ N
Sbjct: 139 TFLRTHDGQFTIMQLV--GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN--------- 187
Query: 508 YMCPFSPTK-KKVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
+C S +V P AY + W +PE + + SD++S G+
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMW 245
Query: 560 E-LANGTVPF 568
E LA G P+
Sbjct: 246 EVLAYGERPY 255
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 109 LPELVICHILQDVLNGLEYIHG-KGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK 167
+P VI I++ VLN YIH K HR VK S+IL+ NG+ LS F ++
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSD------FGESEY 201
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA 219
V + ++ PE + DI+S+GI + VPF+
Sbjct: 202 MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 459 LPELVICHILQDVLNGLEYIHG-KGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK 517
+P VI I++ VLN YIH K HR VK S+IL+ NG+ LS F ++
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSD------FGESEY 201
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA 569
V + ++ PE + DI+S+GI + VPF+
Sbjct: 202 MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFS 253
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 185 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
+ + IHR + A ++L++ N K GL R + KK + P + W++
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VKWMA 227
Query: 535 PEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
PE L + Y +SD++S G+ E+ G P+ P
Sbjct: 228 PEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 51 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP 110
+ D +++ EI M LRHP ++ +F D ++ ++ M G + + N +
Sbjct: 89 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMS 147
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVH 170
E ++ V GL ++H ++H +K +I+ + L + F T H
Sbjct: 148 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK----LIDFGLT---AH 200
Query: 171 LFPPS----TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA 219
L P T + +PEV E GY +D++SVG+ L +G PF
Sbjct: 201 LDPKQSVKVTTGTAEFAAPEVAEGKPVGY--YTDMWSVGVLSYILLSGLSPFG 251
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 401 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP 460
+ D +++ EI M LRHP ++ +F D ++ ++ M G + + N +
Sbjct: 89 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMS 147
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVH 520
E ++ V GL ++H ++H +K +I+ + L + F T H
Sbjct: 148 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK----LIDFGLT---AH 200
Query: 521 LFPPS----TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA 569
L P T + +PEV E GY +D++SVG+ L +G PF
Sbjct: 201 LDPKQSVKVTTGTAEFAAPEVAEGKPVGY--YTDMWSVGVLSYILLSGLSPFG 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 47 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 104
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 105 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 162
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 163 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 213
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 214 VDWWALGVLIYEMAAGYPPFFADQPIQI 241
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 47 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 104
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 105 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 162
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 163 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 213
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 214 VDWWALGVLIYEMAAGYPPFFADQPIQI 241
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 90
K K + +A+K+ ++ + K+ E+ + + HPNI+ + L+ L
Sbjct: 27 KAKWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCL----- 77
Query: 91 LMGFGSCKDLINA-HFNFGLPELVICHILQDVLN---GLEYIHG---KGFIHRAVKASHI 143
+M + L N H LP H + L G+ Y+H K IHR +K ++
Sbjct: 78 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 137
Query: 144 LISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
L+ G + +C F T + + + W++PEV E + Y E+ D++S
Sbjct: 138 LLVAGGT-----VLKICDFG-TACDIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCDVFS 189
Query: 204 VGISCCELANGTVPFAET--PTTLMLIEKLAGATPHLL 239
GI E+ PF E P ++ G P L+
Sbjct: 190 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI 227
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 440
K K + +A+K+ ++ + K+ E+ + + HPNI+ + L+ L
Sbjct: 27 KAKWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCL----- 77
Query: 441 LMGFGSCKDLINA-HFNFGLPELVICHILQDVLN---GLEYIHG---KGFIHRAVKASHI 493
+M + L N H LP H + L G+ Y+H K IHR +K ++
Sbjct: 78 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 137
Query: 494 LISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
L+ G + +C F T + + + W++PEV E + Y E+ D++S
Sbjct: 138 LLVAGGT-----VLKICDFG-TACDIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCDVFS 189
Query: 554 VGISCCELANGTVPFAET--PTTLMLIEKLAGATPHLL 589
GI E+ PF E P ++ G P L+
Sbjct: 190 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI 227
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 31 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 90
K K + +A+K+ ++ + K+ E+ + + HPNI+ + L+ L
Sbjct: 26 KAKWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCL----- 76
Query: 91 LMGFGSCKDLINA-HFNFGLPELVICHILQDVLN---GLEYIHG---KGFIHRAVKASHI 143
+M + L N H LP H + L G+ Y+H K IHR +K ++
Sbjct: 77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 136
Query: 144 LISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 203
L+ G + +C F T + + + W++PEV E + Y E+ D++S
Sbjct: 137 LLVAGGT-----VLKICDFG-TACDIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCDVFS 188
Query: 204 VGISCCELANGTVPFAET--PTTLMLIEKLAGATPHLL 239
GI E+ PF E P ++ G P L+
Sbjct: 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI 226
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 26/218 (11%)
Query: 381 KHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSP 440
K K + +A+K+ ++ + K+ E+ + + HPNI+ + L+ L
Sbjct: 26 KAKWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCL----- 76
Query: 441 LMGFGSCKDLINA-HFNFGLPELVICHILQDVLN---GLEYIHG---KGFIHRAVKASHI 493
+M + L N H LP H + L G+ Y+H K IHR +K ++
Sbjct: 77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNL 136
Query: 494 LISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYS 553
L+ G + +C F T + + + W++PEV E + Y E+ D++S
Sbjct: 137 LLVAGGT-----VLKICDFG-TACDIQTHMTNNKGSAAWMAPEVFEGS--NYSEKCDVFS 188
Query: 554 VGISCCELANGTVPFAET--PTTLMLIEKLAGATPHLL 589
GI E+ PF E P ++ G P L+
Sbjct: 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI 226
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 51 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP 110
+ D +++ EI M LRHP ++ +F D ++ ++ M G + + N +
Sbjct: 195 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMS 253
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVH 170
E ++ V GL ++H ++H +K +I+ + L + F T H
Sbjct: 254 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK----LIDFGLT---AH 306
Query: 171 LFPPS----TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA 219
L P T + +PEV E GY +D++SVG+ L +G PF
Sbjct: 307 LDPKQSVKVTTGTAEFAAPEVAEGKPVGY--YTDMWSVGVLSYILLSGLSPFG 357
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 14/173 (8%)
Query: 401 DEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLP 460
+ D +++ EI M LRHP ++ +F D ++ ++ M G + + N +
Sbjct: 195 ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMS 253
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVH 520
E ++ V GL ++H ++H +K +I+ + L + F T H
Sbjct: 254 EDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK----LIDFGLT---AH 306
Query: 521 LFPPS----TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA 569
L P T + +PEV E GY +D++SVG+ L +G PF
Sbjct: 307 LDPKQSVKVTTGTAEFAAPEVAEGKPVGY--YTDMWSVGVLSYILLSGLSPFG 357
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 73 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 188
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 239
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQI 267
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 73 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 130
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 131 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 188
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 189 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 239
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQI 267
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATD--------------LHLVSPLMGFGSCKDLINAHF 105
EI +R L+HPN+I FL D H++ + K +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQ--- 124
Query: 106 NFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI----SHNGKACLSGLRYMCP 161
LP ++ +L +L+G+ Y+H +HR +K ++IL+ G+ ++ + +
Sbjct: 125 ---LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 162 F-SPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
F SP K L P + +PE+L Y + DI+++G EL
Sbjct: 182 FNSPLKPLADLDP--VVVTFWYRAPELL-LGARHYTKAIDIWAIGCIFAEL 229
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATD--------------LHLVSPLMGFGSCKDLINAHF 455
EI +R L+HPN+I FL D H++ + K +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQ--- 124
Query: 456 NFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI----SHNGKACLSGLRYMCP 511
LP ++ +L +L+G+ Y+H +HR +K ++IL+ G+ ++ + +
Sbjct: 125 ---LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 512 F-SPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
F SP K L P + +PE+L Y + DI+++G EL
Sbjct: 182 FNSPLKPLADLDP--VVVTFWYRAPELL-LGARHYTKAIDIWAIGCIFAEL 229
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 28/219 (12%)
Query: 25 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 83
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 84 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 127
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL--NWLSP 185
+ + IHR + A ++L++ N ++ + + + +T L W++P
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFG----LARDINNIDYYKNTTNGRLPVKWMAP 228
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
E L + Y +SD++S G+ E+ G P+ P
Sbjct: 229 EALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 28/219 (12%)
Query: 375 SSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDAT 433
+V + K K + K D T++DL L E+ M+ + +H NII + +
Sbjct: 55 EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114
Query: 434 DLHLVSPLMGFGSCKDLINAHFNFGL---------PE-------LVICHILQDVLNGLEY 477
L+++ G+ ++ + A G+ PE LV C + G+EY
Sbjct: 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY--QLARGMEY 172
Query: 478 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL--NWLSP 535
+ + IHR + A ++L++ N ++ + + + +T L W++P
Sbjct: 173 LASQKCIHRDLAARNVLVTENNVMKIADFG----LARDINNIDYYKNTTNGRLPVKWMAP 228
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
E L + Y +SD++S G+ E+ G P+ P
Sbjct: 229 EALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V M G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V M G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V M G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V M G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 12 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 67
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 13 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 68
Query: 68 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
I+ Y +S L LV + G +D + H ++ + Q + G+
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 127
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
EY+ + +HR + A +IL+ ++ + P K ++ + W +P
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFG-LAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 186 EVLEQNLDGYDERSDIYSVGISCCEL 211
E L N+ + +SD++S G+ EL
Sbjct: 187 ESLSDNI--FSRQSDVWSFGVVLYEL 210
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 362 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 417
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 13 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 68
Query: 418 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
I+ Y +S L LV + G +D + H ++ + Q + G+
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 127
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
EY+ + +HR + A +IL+ ++ + P K ++ + W +P
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFG-LAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 536 EVLEQNLDGYDERSDIYSVGISCCEL 561
E L N+ + +SD++S G+ EL
Sbjct: 187 ESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 12 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 67
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 26 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 81
Query: 68 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
I+ Y +S L LV + G +D + H ++ + Q + G+
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 140
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
EY+ + +HR + A +IL+ ++ + P K ++ + W +P
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFG-LAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 186 EVLEQNLDGYDERSDIYSVGISCCEL 211
E L N+ + +SD++S G+ EL
Sbjct: 200 ESLSDNI--FSRQSDVWSFGVVLYEL 223
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 362 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 417
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 26 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 81
Query: 418 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
I+ Y +S L LV + G +D + H ++ + Q + G+
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 140
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
EY+ + +HR + A +IL+ ++ + P K ++ + W +P
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFG-LAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 536 EVLEQNLDGYDERSDIYSVGISCCEL 561
E L N+ + +SD++S G+ EL
Sbjct: 200 ESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 12 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 67
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 14 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 69
Query: 68 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
I+ Y +S L LV + G +D + H ++ + Q + G+
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 128
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
EY+ + +HR + A +IL+ ++ + P K ++ + W +P
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFG-LAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 186 EVLEQNLDGYDERSDIYSVGISCCEL 211
E L N+ + +SD++S G+ EL
Sbjct: 188 ESLSDNI--FSRQSDVWSFGVVLYEL 211
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 362 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 417
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 14 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 69
Query: 418 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
I+ Y +S L LV + G +D + H ++ + Q + G+
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 128
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
EY+ + +HR + A +IL+ ++ + P K ++ + W +P
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFG-LAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 536 EVLEQNLDGYDERSDIYSVGISCCEL 561
E L N+ + +SD++S G+ EL
Sbjct: 188 ESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
+ V+ + K T AVKK L+ E+L + C L P I+ + +
Sbjct: 85 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEEL------MACA-GLTSPRIVPLYGAVRE 137
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
+++ L+ GS L+ LPE + L L GLEY+H + +H VKA
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 195
Query: 142 HILISHNG 149
++L+S +G
Sbjct: 196 NVLLSSDG 203
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
+ V+ + K T AVKK L+ E+L + C L P I+ + +
Sbjct: 85 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEEL------MACA-GLTSPRIVPLYGAVRE 137
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
+++ L+ GS L+ LPE + L L GLEY+H + +H VKA
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 195
Query: 492 HILISHNG 499
++L+S +G
Sbjct: 196 NVLLSSDG 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 12 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 67
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 10 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 65
Query: 68 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
I+ Y +S +L LV + G +D + H ++ + Q + G+
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 124
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWL 183
EY+ + +HR + A +IL+ ++ GL + P V S + W
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF---WY 181
Query: 184 SPEVLEQNLDGYDERSDIYSVGISCCEL 211
+PE L N+ + +SD++S G+ EL
Sbjct: 182 APESLSDNI--FSRQSDVWSFGVVLYEL 207
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 362 KICSILGQCFNNLSSVYLSKHKV----TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL 417
K S LG+ N SV L ++ T L+AVK+ L + + EI ++ L
Sbjct: 10 KYISQLGK--GNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 65
Query: 418 RHPNIICY--ISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
I+ Y +S +L LV + G +D + H ++ + Q + G+
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ-ICKGM 124
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWL 533
EY+ + +HR + A +IL+ ++ GL + P V S + W
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF---WY 181
Query: 534 SPEVLEQNLDGYDERSDIYSVGISCCEL 561
+PE L N+ + +SD++S G+ EL
Sbjct: 182 APESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 175
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP-- 184
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 231
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 185 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 232 AGATPHLLDCTTYYV 246
PHL Y +
Sbjct: 239 RLYRPHLASEKVYTI 253
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 525
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP-- 184
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 581
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 185 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 582 AGATPHLLDCTTYYV 596
PHL Y +
Sbjct: 239 RLYRPHLASEKVYTI 253
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 56 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC--KDLINAHFNFGLPELV 113
++ EI +R LRH N+I + + + +M + C ++++++ P
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM-VMEYCVCGMQEMLDSVPEKRFPVCQ 110
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL---RYMCPFSP------ 164
+++GLEY+H +G +H+ +K ++L++ G +S L + PF+
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 165 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++ PP A L+ S G+ + DI+S G++ + G PF
Sbjct: 171 SQGSPAFQPPEIANGLDTFS---------GF--KVDIWSAGVTLYNITTGLYPF 213
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 406 SLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC--KDLINAHFNFGLPELV 463
++ EI +R LRH N+I + + + +M + C ++++++ P
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM-VMEYCVCGMQEMLDSVPEKRFPVCQ 110
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL---RYMCPFSP------ 514
+++GLEY+H +G +H+ +K ++L++ G +S L + PF+
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 515 TKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++ PP A L+ S G+ + DI+S G++ + G PF
Sbjct: 171 SQGSPAFQPPEIANGLDTFS---------GF--KVDIWSAGVTLYNITTGLYPF 213
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLIIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIIISK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTLMLIEKL 231
D +++G+ E+A G P FA+ P + + EK+
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQP--IQIYEKI 250
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLIIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIIISK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTLMLIEKL 581
D +++G+ E+A G P FA+ P + + EK+
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQP--IQIYEKI 250
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 81
+ V+ + K T AVKK L+ E+L + C L P I+ + +
Sbjct: 104 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEEL------MACA-GLTSPRIVPLYGAVRE 156
Query: 82 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 141
+++ L+ GS L+ LPE + L L GLEY+H + +H VKA
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 214
Query: 142 HILISHNG 149
++L+S +G
Sbjct: 215 NVLLSSDG 222
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLD 431
+ V+ + K T AVKK L+ E+L + C L P I+ + +
Sbjct: 104 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEEL------MACA-GLTSPRIVPLYGAVRE 156
Query: 432 ATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKAS 491
+++ L+ GS L+ LPE + L L GLEY+H + +H VKA
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 214
Query: 492 HILISHNG 499
++L+S +G
Sbjct: 215 NVLLSSDG 222
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 175
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 164
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 231
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 165 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218
Query: 232 AGATPHLLDCTTYYV 246
PHL Y +
Sbjct: 219 RLYRPHLASEKVYTI 233
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 525
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 164
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 581
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 165 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218
Query: 582 AGATPHLLDCTTYYV 596
PHL Y +
Sbjct: 219 RLYRPHLASEKVYTI 233
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 29 LSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH-- 86
L K + I VK + + + + E +R HPN++ + + H
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG-KGFIHR-AVKASHIL 144
L++ +GS ++++ NF + + D G ++H + I R A+ + +
Sbjct: 86 LITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVX 145
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS-DIYS 203
I + A +S F P Y W++PE L++ + + RS D +S
Sbjct: 146 IDEDXTARISXADVKFSFQS---------PGRXYAPAWVAPEALQKKPEDTNRRSADXWS 196
Query: 204 VGISCCELANGTVPFAE 220
+ EL VPFA+
Sbjct: 197 FAVLLWELVTREVPFAD 213
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 14/197 (7%)
Query: 379 LSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLH-- 436
L K + I VK + + + + E +R HPN++ + + H
Sbjct: 26 LWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHG-KGFIHR-AVKASHIL 494
L++ +GS ++++ NF + + D G ++H + I R A+ + +
Sbjct: 86 LITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVX 145
Query: 495 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERS-DIYS 553
I + A +S F P Y W++PE L++ + + RS D +S
Sbjct: 146 IDEDXTARISXADVKFSFQS---------PGRXYAPAWVAPEALQKKPEDTNRRSADXWS 196
Query: 554 VGISCCELANGTVPFAE 570
+ EL VPFA+
Sbjct: 197 FAVLLWELVTREVPFAD 213
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 175
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 168
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 231
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 169 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222
Query: 232 AGATPHLLDCTTYYV 246
PHL Y +
Sbjct: 223 RLYRPHLASEKVYTI 237
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 525
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 168
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 581
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 169 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222
Query: 582 AGATPHLLDCTTYYV 596
PHL Y +
Sbjct: 223 RLYRPHLASEKVYTI 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y+ + +G +VY ++ + +A+K + + S E+ +R L
Sbjct: 4 SRYEPVAEIG--VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 69 ---HPNIICYISS-FLDATDLHLVSPLMGFGSCKDL---INAHFNFGLPELVICHILQDV 121
HPN++ + TD + L+ +DL ++ GLP I +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
L GL+++H +HR +K +IL++ G L+ +S ++ L P L
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAP--VVVTLW 176
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PEVL Q+ Y D++SVG E+
Sbjct: 177 YRAPEVLLQST--YATPVDMWSVGCIFAEM 204
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y+ + +G +VY ++ + +A+K + + S E+ +R L
Sbjct: 4 SRYEPVAEIG--VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 419 ---HPNIICYISS-FLDATDLHLVSPLMGFGSCKDL---INAHFNFGLPELVICHILQDV 471
HPN++ + TD + L+ +DL ++ GLP I +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
L GL+++H +HR +K +IL++ G L+ +S ++ L P L
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAP--VVVTLW 176
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PEVL Q+ Y D++SVG E+
Sbjct: 177 YRAPEVLLQST--YATPVDMWSVGCIFAEM 204
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ ++A G P FA+ P +
Sbjct: 219 VDWWALGVLIYQMAAGYPPFFADQPIQI 246
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ ++A G P FA+ P +
Sbjct: 219 VDWWALGVLIYQMAAGYPPFFADQPIQI 246
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 175
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 169
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 231
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 170 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 232 AGATPHLLDCTTYYV 246
PHL Y +
Sbjct: 224 RLYRPHLASEKVYTI 238
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 525
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 169
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 581
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 170 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 582 AGATPHLLDCTTYYV 596
PHL Y +
Sbjct: 224 RLYRPHLASEKVYTI 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 38 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 95
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 153
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V + +L+PE++ GY++
Sbjct: 154 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSK--GYNKA 204
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQPIQI 232
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 38 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 95
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 96 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 153
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V + +L+PE++ GY++
Sbjct: 154 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSK--GYNKA 204
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQPIQI 232
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 12/184 (6%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+A+K T+ + E M HPNII +V+ M GS
Sbjct: 80 VAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 99 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSG 155
+ H F + +LV +L+ V G+ Y+ G++HR + A ++L+ N K G
Sbjct: 139 TFLRTHDGQFTIMQLV--GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 156 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANG 214
L + P + W +PE + + SD++S G+ E LA G
Sbjct: 197 LSRVLEDDPDAAXTTT---GGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYG 251
Query: 215 TVPF 218
P+
Sbjct: 252 ERPY 255
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 12/184 (6%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 448
+A+K T+ + E M HPNII +V+ M GS
Sbjct: 80 VAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD 138
Query: 449 DLINAH-FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSG 505
+ H F + +LV +L+ V G+ Y+ G++HR + A ++L+ N K G
Sbjct: 139 TFLRTHDGQFTIMQLV--GMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 506 LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANG 564
L + P + W +PE + + SD++S G+ E LA G
Sbjct: 197 LSRVLEDDPDAAXTTT---GGKIPIRWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYG 251
Query: 565 TVPF 568
P+
Sbjct: 252 ERPY 255
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 175
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 118 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 175
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 231
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 176 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
Query: 232 AGATPHLLDCTTYYV 246
PHL Y +
Sbjct: 230 RLYRPHLASEKVYTI 244
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 525
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 118 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 175
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 581
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 176 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
Query: 582 AGATPHLLDCTTYYV 596
PHL Y +
Sbjct: 230 RLYRPHLASEKVYTI 244
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK T A+K LD+ LK + H E + + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK T A+K LD+ LK + H E + + P ++ S
Sbjct: 53 GSFGRVMLVKHKETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V + +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V + +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ +R + HPNII + + TD+ L+ L+ G D + L E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEA 117
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ +R + HPNII + + TD+ L+ L+ G D + L E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEA 117
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 175
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 184
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 231
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 185 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 232 AGATPHLLDCTTYYV 246
PHL Y +
Sbjct: 239 RLYRPHLASEKVYTI 253
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFSPTKKKVHLFPPS 525
+DV +EY+ K F+HR + A + L++ G +S GL RY+ T FP
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP-- 184
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVP---FAETPTTLMLIEKL 581
+ W PEVL + +SDI++ G+ E+ + G +P F + T + + L
Sbjct: 185 ----VRWSPPEVL--MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 582 AGATPHLLDCTTYYV 596
PHL Y +
Sbjct: 239 RLYRPHLASEKVYTI 253
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
S Y+ + +G +VY ++ + +A+K + + S E+ +R L
Sbjct: 4 SRYEPVAEIG--VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 69 ---HPNIICYISS-FLDATDLHLVSPLMGFGSCKDL---INAHFNFGLPELVICHILQDV 121
HPN++ + TD + L+ +DL ++ GLP I +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 181
L GL+++H +HR +K +IL++ G L+ +S ++ L P L
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDP--VVVTLW 176
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ +PEVL Q+ Y D++SVG E+
Sbjct: 177 YRAPEVLLQST--YATPVDMWSVGCIFAEM 204
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
S Y+ + +G +VY ++ + +A+K + + S E+ +R L
Sbjct: 4 SRYEPVAEIG--VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 419 ---HPNIICYISS-FLDATDLHLVSPLMGFGSCKDL---INAHFNFGLPELVICHILQDV 471
HPN++ + TD + L+ +DL ++ GLP I +++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLN 531
L GL+++H +HR +K +IL++ G L+ +S ++ L P L
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDP--VVVTLW 176
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ +PEVL Q+ Y D++SVG E+
Sbjct: 177 YRAPEVLLQST--YATPVDMWSVGCIFAEM 204
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + + P + L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-------LAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + + P + L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-------LAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 127/308 (41%), Gaps = 32/308 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
Y+ + LG+ VY + VTN+ +A+K+ L+ + + E+ ++ L+H
Sbjct: 35 RYRRITKLGE--GTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHF--NFGLPELVICHILQDVLNGLEY 127
NII S LHL+ F ++ + + N + VI L ++NG+ +
Sbjct: 93 RNIIELKSVIHHNHRLHLI-----FEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 128 IHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFS-------PTKKKVHLFPPSTAYNL 180
H + +HR +K ++L+S + + L+ + F P ++ H L
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLK-IGDFGLARAFGIPIRQFTH-----EIITL 201
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPH 237
+ PE+L + Y DI+S+ E+ T F +E + E L
Sbjct: 202 WYRPPEILLGSRH-YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG----- 255
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC 297
L D TT+ T D +++ + + +VL + + + + L D KR A
Sbjct: 256 LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAM-LEMDPVKRISAK 314
Query: 298 NLLQHAFF 305
N L+H +F
Sbjct: 315 NALEHPYF 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
Y+ + LG+ VY + VTN+ +A+K+ L+ + + E+ ++ L+H
Sbjct: 35 RYRRITKLGE--GTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHF--NFGLPELVICHILQDVLNGLEY 477
NII S LHL+ F ++ + + N + VI L ++NG+ +
Sbjct: 93 RNIIELKSVIHHNHRLHLI-----FEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 478 IHGKGFIHRAVKASHILIS 496
H + +HR +K ++L+S
Sbjct: 148 CHSRRCLHRDLKPQNLLLS 166
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE--DLKSLHHEIVCM 64
VP NY+I ++G+ + VYL+ K N+ +A+KK N RM ++ D K + EI +
Sbjct: 26 VPDNYEIKHLIGR--GSYGYVYLAYDKNANKNVAIKKVN--RMFEDLIDCKRILREITIL 81
Query: 65 RHLRHPNII-----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
L+ II L +L++V + K F L E + IL
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEQHVKTILY 138
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGL 156
++L G ++IH G IHR +K ++ L++ + K C GL
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGL 177
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE--DLKSLHHEIVCM 414
VP NY+I ++G+ + VYL+ K N+ +A+KK N RM ++ D K + EI +
Sbjct: 26 VPDNYEIKHLIGR--GSYGYVYLAYDKNANKNVAIKKVN--RMFEDLIDCKRILREITIL 81
Query: 415 RHLRHPNII-----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
L+ II L +L++V + K F L E + IL
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEQHVKTILY 138
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGL 506
++L G ++IH G IHR +K ++ L++ + K C GL
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGL 177
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 138/342 (40%), Gaps = 57/342 (16%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 66
++ + ++G+ + + V L + K T+++ A+K + + D ED+ + E V +
Sbjct: 9 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 182
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSXFCGTPNY 176
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCT 242
++PE+L G+ D +++G+ E+ G PF + G++
Sbjct: 177 IAPEILRGEDYGF--SVDWWALGVLMFEMMAGRSPF-----------DIVGSS------- 216
Query: 243 TYYVDTGQDDGEENACSYISEQ--QTQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC--- 297
D+ ++N Y+ + + Q+ R S S+++ L++D +R L C
Sbjct: 217 --------DNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER-LGCHPQ 267
Query: 298 ----NLLQHAFFKQTKKCSVMLPELLRPALSLNESNVCEINN 335
++ H FF+ +M + + P N S ++N
Sbjct: 268 TGFADIQGHPFFRNV-DWDMMEQKQVVPPFKPNISGEFGLDN 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 416
++ + ++G+ + + V L + K T+++ A+K + + D ED+ + E V +
Sbjct: 9 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 532
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSXFCGTPNY 176
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE+L G+ D +++G+ E+ G PF
Sbjct: 177 IAPEILRGEDYGF--SVDWWALGVLMFEMMAGRSPF 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 66
++ + ++G+ + + V L + K T+++ A+K + + D ED+ + E V +
Sbjct: 20 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 77
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 78 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 182
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSXFCGTPNY 187
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++PE+L G+ D +++G+ E+ G PF
Sbjct: 188 IAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 221
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 416
++ + ++G+ + + V L + K T+++ A+K + + D ED+ + E V +
Sbjct: 20 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 77
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 78 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 532
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSXFCGTPNY 187
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE+L G+ D +++G+ E+ G PF
Sbjct: 188 IAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+P ++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPAIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KHK + A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHKESGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+P ++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPAIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYIS-----SFLDATDLH 86
H+ T + +A+K+ + ++ ++ + EI M+ L HPN++ L DL
Sbjct: 36 HQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 94
Query: 87 LVSPLMGF---GSCKDLINAHFNF-GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASH 142
L++ M + G + +N N GL E I +L D+ + L Y+H IHR +K +
Sbjct: 95 LLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 152
Query: 143 ILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNWLSPEVLEQNLDGYDERSD 200
I++ + + + + K++ T + L +L+PE+LEQ Y D
Sbjct: 153 IVLQPGPQRLIHKIIDLG----YAKELDQGELCTEFVGTLQYLAPELLEQK--KYTVTVD 206
Query: 201 IYSVGISCCELANGTVPF 218
+S G E G PF
Sbjct: 207 YWSFGTLAFECITGFRPF 224
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYIS-----SFLDATDLH 436
H+ T + +A+K+ + ++ ++ + EI M+ L HPN++ L DL
Sbjct: 36 HQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 94
Query: 437 LVSPLMGF---GSCKDLINAHFNF-GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASH 492
L++ M + G + +N N GL E I +L D+ + L Y+H IHR +K +
Sbjct: 95 LLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 152
Query: 493 ILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNWLSPEVLEQNLDGYDERSD 550
I++ + + + + K++ T + L +L+PE+LEQ Y D
Sbjct: 153 IVLQPGPQRLIHKIIDLG----YAKELDQGELCTEFVGTLQYLAPELLEQK--KYTVTVD 206
Query: 551 IYSVGISCCELANGTVPF 568
+S G E G PF
Sbjct: 207 YWSFGTLAFECITGFRPF 224
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 4 LDNVP-SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEI 61
LD V +++ +LG+ + V L+ K T +L A+K D + D+D++ E
Sbjct: 13 LDRVKLTDFNFLMVLGK--GSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 62 VCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 120
+ L P + + S D L+ V + G I F P+ V +
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF--YAAE 128
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
+ GL ++H +G I+R +K ++++ G ++ MC K H+ T
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFG-MC-------KEHMMDGVTTREF 180
Query: 181 ----NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++++PE++ Y + D ++ G+ E+ G PF
Sbjct: 181 CGTPDYIAPEIIAYQ--PYGKSVDWWAYGVLLYEMLAGQPPF 220
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 354 LDNVP-SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEI 411
LD V +++ +LG+ + V L+ K T +L A+K D + D+D++ E
Sbjct: 13 LDRVKLTDFNFLMVLGK--GSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 412 VCMRHLRHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQD 470
+ L P + + S D L+ V + G I F P+ V +
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF--YAAE 128
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
+ GL ++H +G I+R +K ++++ G ++ MC K H+ T
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFG-MC-------KEHMMDGVTTREF 180
Query: 531 ----NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++++PE++ Y + D ++ G+ E+ G PF
Sbjct: 181 CGTPDYIAPEIIAYQ--PYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 57 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 114
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 172
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 464
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 522
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 12 KICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
KI ++G F + S +L +A+K T++ + E M HP
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHP 94
Query: 71 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHILQDVLNGLEYIH 129
N+I +T + +++ M GS + + F + +LV +L+ + G++Y+
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV--GMLRGIAAGMKYLA 152
Query: 130 GKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 186
++HR + A +IL++ N K GL R++ T + + W +PE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGGKIPIRWTAPE 210
Query: 187 VLEQNLDGYDERSDIYSVGISCCE-LANGTVPFAE 220
++ + SD++S GI E ++ G P+ +
Sbjct: 211 AIQYR--KFTSASDVWSYGIVMWEVMSYGERPYWD 243
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 362 KICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
KI ++G F + S +L +A+K T++ + E M HP
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHP 94
Query: 421 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHILQDVLNGLEYIH 479
N+I +T + +++ M GS + + F + +LV +L+ + G++Y+
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV--GMLRGIAAGMKYLA 152
Query: 480 GKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPTKKKVHLFPPSTAYNLNWLSPE 536
++HR + A +IL++ N K GL R++ T + + W +PE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE--DDTSDPTYTSALGGKIPIRWTAPE 210
Query: 537 VLEQNLDGYDERSDIYSVGISCCE-LANGTVPFAE 570
++ + SD++S GI E ++ G P+ +
Sbjct: 211 AIQYR--KFTSASDVWSYGIVMWEVMSYGERPYWD 243
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 57 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 114
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 172
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 464
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 522
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 32 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYIS-----SFLDATDLH 86
H+ T + +A+K+ + ++ ++ + EI M+ L HPN++ L DL
Sbjct: 35 HQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93
Query: 87 LVSPLMGF---GSCKDLINAHFNF-GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASH 142
L++ M + G + +N N GL E I +L D+ + L Y+H IHR +K +
Sbjct: 94 LLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 151
Query: 143 ILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNWLSPEVLEQNLDGYDERSD 200
I++ + + + + K++ T + L +L+PE+LEQ Y D
Sbjct: 152 IVLQPGPQRLIHKIIDLG----YAKELDQGELCTEFVGTLQYLAPELLEQK--KYTVTVD 205
Query: 201 IYSVGISCCELANGTVPF 218
+S G E G PF
Sbjct: 206 YWSFGTLAFECITGFRPF 223
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 382 HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYIS-----SFLDATDLH 436
H+ T + +A+K+ + ++ ++ + EI M+ L HPN++ L DL
Sbjct: 35 HQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93
Query: 437 LVSPLMGF---GSCKDLINAHFNF-GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASH 492
L++ M + G + +N N GL E I +L D+ + L Y+H IHR +K +
Sbjct: 94 LLA--MEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 151
Query: 493 ILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NLNWLSPEVLEQNLDGYDERSD 550
I++ + + + + K++ T + L +L+PE+LEQ Y D
Sbjct: 152 IVLQPGPQRLIHKIIDLG----YAKELDQGELCTEFVGTLQYLAPELLEQK--KYTVTVD 205
Query: 551 IYSVGISCCELANGTVPF 568
+S G E G PF
Sbjct: 206 YWSFGTLAFECITGFRPF 223
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 57 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 114
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 172
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 464
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 522
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 15 SILGQCFNNLS--------SVYLSKHKVTNQLIAVKK----FNLDRMTDEDLKSL-HHEI 61
S Q F LS V+ + K +L AVK+ F + L + HE
Sbjct: 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEK 112
Query: 62 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH---FNFGLPELVICHIL 118
V +HP + ++ + L+L + L C + H + LPE + L
Sbjct: 113 VG----QHPCCVRLEQAWEEGGILYLQTEL-----CGPSLQQHCEAWGASLPEAQVWGYL 163
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPF-SPTKKKVHLFPPSTA 177
+D L L ++H +G +H VK ++I + G+ L + + +V P
Sbjct: 164 RDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP--- 220
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELA 212
+++PE+L+ + Y +D++S+G++ E+A
Sbjct: 221 ---RYMAPELLQGS---YGTAADVFSLGLTILEVA 249
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 365 SILGQCFNNLS--------SVYLSKHKVTNQLIAVKK----FNLDRMTDEDLKSL-HHEI 411
S Q F LS V+ + K +L AVK+ F + L + HE
Sbjct: 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEK 112
Query: 412 VCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH---FNFGLPELVICHIL 468
V +HP + ++ + L+L + L C + H + LPE + L
Sbjct: 113 VG----QHPCCVRLEQAWEEGGILYLQTEL-----CGPSLQQHCEAWGASLPEAQVWGYL 163
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPF-SPTKKKVHLFPPSTA 527
+D L L ++H +G +H VK ++I + G+ L + + +V P
Sbjct: 164 RDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP--- 220
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELA 562
+++PE+L+ + Y +D++S+G++ E+A
Sbjct: 221 ---RYMAPELLQGS---YGTAADVFSLGLTILEVA 249
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 57 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 114
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 172
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 407 LHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN--AHFNFGLPELVI 464
+ +I+ H R I+ +F TDL LV +M G + I N G E
Sbjct: 234 VEKKILAKVHSRF--IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 522
+++GLE++H + I+R +K ++L+ +G +S GL TK K +
Sbjct: 292 IFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
P +++PE+L + YD D +++G++ E+ PF
Sbjct: 352 TP------GFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 66
++ + ++G+ + + V L + K T+++ A+K + + D ED+ + E V +
Sbjct: 5 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 182
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSXFCGTPNY 172
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++PE+L G+ D +++G+ E+ G PF
Sbjct: 173 IAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 206
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 416
++ + ++G+ + + V L + K T+++ A+K + + D ED+ + E V +
Sbjct: 5 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 532
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSXFCGTPNY 172
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE+L G+ D +++G+ E+ G PF
Sbjct: 173 IAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 206
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V + G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K ++LI G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLLIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 66
++ + ++G+ + + V L + K T+++ A++ + + D ED+ + E V +
Sbjct: 52 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA 109
Query: 67 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 110 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 182
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSTFCGTPNY 219
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++PE+L G+ D +++G+ E+ G PF
Sbjct: 220 IAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 253
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTD-EDLKSLHHEI-VCMRH 416
++ + ++G+ + + V L + K T+++ A++ + + D ED+ + E V +
Sbjct: 52 QDFDLLRVIGR--GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQA 109
Query: 417 LRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
HP ++ S F + L V + G + + LPE ++ L
Sbjct: 110 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 532
Y+H +G I+R +K ++L+ G L+ MC K L P T N+
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG-MC-------KEGLRPGDTTSTFCGTPNY 219
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE+L G+ D +++G+ E+ G PF
Sbjct: 220 IAPEILRGEDYGFS--VDWWALGVLMFEMMAGRSPF 253
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLF 172
+ H DV G++Y+ K FIHR + A +IL+ N A ++ F ++ ++V++
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA------DFGLSRGQEVYVK 197
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
+ W++ E L N Y SD++S G+ E+ + G P+
Sbjct: 198 KTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLF 522
+ H DV G++Y+ K FIHR + A +IL+ N A ++ F ++ ++V++
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA------DFGLSRGQEVYVK 197
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ W++ E L N Y SD++S G+ E+ + G P+
Sbjct: 198 KTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLF 172
+ H DV G++Y+ K FIHR + A +IL+ N A ++ F ++ ++V++
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA------DFGLSRGQEVYVK 187
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
+ W++ E L N Y SD++S G+ E+ + G P+
Sbjct: 188 KTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLF 522
+ H DV G++Y+ K FIHR + A +IL+ N A ++ F ++ ++V++
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA------DFGLSRGQEVYVK 187
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ W++ E L N Y SD++S G+ E+ + G P+
Sbjct: 188 KTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 114 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLF 172
+ H DV G++Y+ K FIHR + A +IL+ N A ++ F ++ ++V++
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIA------DFGLSRGQEVYVK 194
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
+ W++ E L N Y SD++S G+ E+ + G P+
Sbjct: 195 KTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 464 ICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLF 522
+ H DV G++Y+ K FIHR + A +IL+ N A ++ F ++ ++V++
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIA------DFGLSRGQEVYVK 194
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ W++ E L N Y SD++S G+ E+ + G P+
Sbjct: 195 KTMGRLPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 38 LIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC 97
L+AVK L +D K H E + +L+H +I+ + ++ L +V M G
Sbjct: 45 LVAVK--TLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL 102
Query: 98 KDLINAH------FNFGLP--ELV---ICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 146
+ AH G P EL + HI Q + G+ Y+ + F+HR + + L+
Sbjct: 103 NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG 162
Query: 147 HN-----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 201
N G +S Y + + T + W+ PE + + SD+
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDY-------YRVGGHTMLPIRWMPPESIMYR--KFTTESDV 213
Query: 202 YSVGISCCEL-ANGTVPFAE 220
+S+G+ E+ G P+ +
Sbjct: 214 WSLGVVLWEIFTYGKQPWYQ 233
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 388 LIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC 447
L+AVK L +D K H E + +L+H +I+ + ++ L +V M G
Sbjct: 45 LVAVK--TLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL 102
Query: 448 KDLINAH------FNFGLP--ELV---ICHILQDVLNGLEYIHGKGFIHRAVKASHILIS 496
+ AH G P EL + HI Q + G+ Y+ + F+HR + + L+
Sbjct: 103 NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG 162
Query: 497 HN-----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDI 551
N G +S Y + + T + W+ PE + + SD+
Sbjct: 163 ENLLVKIGDFGMSRDVYSTDY-------YRVGGHTMLPIRWMPPESIMYR--KFTTESDV 213
Query: 552 YSVGISCCEL-ANGTVPFAE 570
+S+G+ E+ G P+ +
Sbjct: 214 WSLGVVLWEIFTYGKQPWYQ 233
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+++I ++G+ S V + K K T Q+ A+K N M LK E+ C R R
Sbjct: 62 DFEILKVIGR--GAFSEVAVVKMKQTGQVYAMKIMNKWDM----LK--RGEVSCFREER- 112
Query: 70 PNIIC-----YIS----SFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHIL 118
+++ +I+ +F D L+LV M + DL+ FG +P + L
Sbjct: 113 -DVLVNGDRRWITQLHFAFQDENYLYLV---MEYYVGGDLLTLLSKFGERIPAEMARFYL 168
Query: 119 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY 178
+++ ++ +H G++HR +K +IL+ G L+ L T
Sbjct: 169 AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP- 227
Query: 179 NLNWLSPEVLEQ-----NLDGYDERSDIYSVGISCCELANGTVPF 218
++LSPE+L+ Y D +++G+ E+ G PF
Sbjct: 228 --DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+++I ++G+ S V + K K T Q+ A+K N M LK E+ C R R
Sbjct: 62 DFEILKVIGR--GAFSEVAVVKMKQTGQVYAMKIMNKWDM----LK--RGEVSCFREER- 112
Query: 420 PNIIC-----YIS----SFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHIL 468
+++ +I+ +F D L+LV M + DL+ FG +P + L
Sbjct: 113 -DVLVNGDRRWITQLHFAFQDENYLYLV---MEYYVGGDLLTLLSKFGERIPAEMARFYL 168
Query: 469 QDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY 528
+++ ++ +H G++HR +K +IL+ G L+ L T
Sbjct: 169 AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP- 227
Query: 529 NLNWLSPEVLEQ-----NLDGYDERSDIYSVGISCCELANGTVPF 568
++LSPE+L+ Y D +++G+ E+ G PF
Sbjct: 228 --DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 95 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 154
G+ + I L +++ + + + G++YIH K IHR +K S+I + + +
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 155 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ K+ + L ++SPE + Y + D+Y++G+ EL
Sbjct: 179 DFGLVTSLKNDGKRTR-----SKGTLRYMSPEQISSQ--DYGKEVDLYALGLILAEL 228
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 445 GSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS 504
G+ + I L +++ + + + G++YIH K IHR +K S+I + + +
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIG 178
Query: 505 GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ K+ + L ++SPE + Y + D+Y++G+ EL
Sbjct: 179 DFGLVTSLKNDGKRTR-----SKGTLRYMSPEQISSQ--DYGKEVDLYALGLILAEL 228
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
TD+ + E M HPNII + +++ M GS + + F
Sbjct: 55 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 114
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSP-TKK 167
+ +LV +L+ + +G++Y+ ++HR + A +IL++ N +C S
Sbjct: 115 VIQLV--GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN---------LVCKVSDFGMS 163
Query: 168 KVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPFA 219
+V P AY + W +PE + + SD++S GI E ++ G P+
Sbjct: 164 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYW 221
Query: 220 E 220
+
Sbjct: 222 D 222
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
TD+ + E M HPNII + +++ M GS + + F
Sbjct: 55 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 114
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSP-TKK 517
+ +LV +L+ + +G++Y+ ++HR + A +IL++ N +C S
Sbjct: 115 VIQLV--GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN---------LVCKVSDFGMS 163
Query: 518 KVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPFA 569
+V P AY + W +PE + + SD++S GI E ++ G P+
Sbjct: 164 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYW 221
Query: 570 E 570
+
Sbjct: 222 D 222
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 33/219 (15%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
++K ++G V+ +KH++ + +K+ + E E+ + L H
Sbjct: 12 DFKEIELIGS--GGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDH 63
Query: 70 PNIICYISSFLDATD-----------------LHLVSPLMGFGSCKDLINAHFNFGLPEL 112
NI+ Y + D D L + G+ + I L ++
Sbjct: 64 VNIVHYNGCW-DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 113 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 172
+ + + + G++YIH K I+R +K S+I + + + + K+
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR-- 180
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
+ L ++SPE + Y + D+Y++G+ EL
Sbjct: 181 ---SKGTLRYMSPEQISSQ--DYGKEVDLYALGLILAEL 214
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 33/219 (15%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
++K ++G V+ +KH++ + +K+ + E E+ + L H
Sbjct: 12 DFKEIELIGS--GGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDH 63
Query: 420 PNIICYISSFLDATD-----------------LHLVSPLMGFGSCKDLINAHFNFGLPEL 462
NI+ Y + D D L + G+ + I L ++
Sbjct: 64 VNIVHYNGCW-DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 463 VICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLF 522
+ + + + G++YIH K I+R +K S+I + + + + K+
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR-- 180
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ L ++SPE + Y + D+Y++G+ EL
Sbjct: 181 ---SKGTLRYMSPEQISSQ--DYGKEVDLYALGLILAEL 214
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 116/301 (38%), Gaps = 64/301 (21%)
Query: 33 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH-PNIICYISSFLDATDLHLVSPL 91
K T Q A K R + + HEI + + P +I + + +++ L+
Sbjct: 51 KSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEY 110
Query: 92 MGFGSCKDLINAHFNFGLPELV-------ICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
G F+ LPEL + +++ +L G+ Y+H +H +K +IL
Sbjct: 111 AAGGEI-------FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSPEVLEQNLDGYDERSDIYS 203
+S L ++ + F ++K H +L+PE+L N D +D+++
Sbjct: 164 LS--SIYPLGDIK-IVDFGMSRKIGHACELREIMGTPEYLAPEIL--NYDPITTATDMWN 218
Query: 204 VGISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYISE 263
+GI L T PF GE+N +Y++
Sbjct: 219 IGIIAYMLLTHTSPFV---------------------------------GEDNQETYLNI 245
Query: 264 QQTQVLTSRKFSDSFHSIVELC-------LSRDVDKRPLACNLLQHAFFKQTKKCSVMLP 316
Q V S ++F S+ +L L ++ +KRP A L H++ +Q ++ P
Sbjct: 246 SQVNVDYSE---ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHP 302
Query: 317 E 317
E
Sbjct: 303 E 303
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 21/196 (10%)
Query: 383 KVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH-PNIICYISSFLDATDLHLVSPL 441
K T Q A K R + + HEI + + P +I + + +++ L+
Sbjct: 51 KSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEY 110
Query: 442 MGFGSCKDLINAHFNFGLPELV-------ICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
G F+ LPEL + +++ +L G+ Y+H +H +K +IL
Sbjct: 111 AAGGEI-------FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163
Query: 495 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL-NWLSPEVLEQNLDGYDERSDIYS 553
+S L ++ + F ++K H +L+PE+L N D +D+++
Sbjct: 164 LS--SIYPLGDIK-IVDFGMSRKIGHACELREIMGTPEYLAPEIL--NYDPITTATDMWN 218
Query: 554 VGISCCELANGTVPFA 569
+GI L T PF
Sbjct: 219 IGIIAYMLLTHTSPFV 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 98 KDLINAHFNFGLPELVIC-HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL 156
KD +N + E +C HI + +E++H KG +HR +K S+I + + +
Sbjct: 149 KDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 208
Query: 157 RYMCPFSPTKKKVHLFPPSTAYNLN--------WLSPEVLEQNLDGYDERSDIYSVGISC 208
+ +++ + P AY + ++SPE + N Y + DI+S+G+
Sbjct: 209 GLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLIL 266
Query: 209 CEL 211
EL
Sbjct: 267 FEL 269
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 448 KDLINAHFNFGLPELVIC-HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL 506
KD +N + E +C HI + +E++H KG +HR +K S+I + + +
Sbjct: 149 KDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 208
Query: 507 RYMCPFSPTKKKVHLFPPSTAYNLN--------WLSPEVLEQNLDGYDERSDIYSVGISC 558
+ +++ + P AY + ++SPE + N Y + DI+S+G+
Sbjct: 209 GLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLIL 266
Query: 559 CEL 561
EL
Sbjct: 267 FEL 269
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE--DLKSLHHEIVCM 64
VP NY I ++G+ + VYL+ K T + +A+KK N RM ++ D K + EI +
Sbjct: 24 VPDNYIIKHLIGR--GSYGYVYLAYDKNTEKNVAIKKVN--RMFEDLIDCKRILREITIL 79
Query: 65 RHLRHPNII-----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
L+ II L +L++V + K F L E I IL
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEEHIKTILY 136
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGL 156
++L G +IH G IHR +K ++ L++ + K C GL
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL 175
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE--DLKSLHHEIVCM 414
VP NY I ++G+ + VYL+ K T + +A+KK N RM ++ D K + EI +
Sbjct: 24 VPDNYIIKHLIGR--GSYGYVYLAYDKNTEKNVAIKKVN--RMFEDLIDCKRILREITIL 79
Query: 415 RHLRHPNII-----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
L+ II L +L++V + K F L E I IL
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEEHIKTILY 136
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGL 506
++L G +IH G IHR +K ++ L++ + K C GL
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL 175
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 25/218 (11%)
Query: 12 KICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
KI ++G F + S L + +A+K + T++ + E M HP
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG-YTEKQRRDFLCEASIMGQFDHP 104
Query: 71 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHILQDVLNGLEYIH 129
N++ + +V M G+ + H F + +LV +L+ + G+ Y+
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV--GMLRGIAAGMRYLA 162
Query: 130 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLFPPSTAYN-------LN 181
G++HR + A +IL++ N +C S +V P Y +
Sbjct: 163 DMGYVHRDLAARNILVNSN---------LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 218
W +PE ++ + SD++S GI E ++ G P+
Sbjct: 214 WTAPEAIQYR--KFTSASDVWSYGIVMWEVMSYGERPY 249
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 88/218 (40%), Gaps = 25/218 (11%)
Query: 362 KICSILGQC-FNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
KI ++G F + S L + +A+K + T++ + E M HP
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVG-YTEKQRRDFLCEASIMGQFDHP 104
Query: 421 NIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFGLPELVICHILQDVLNGLEYIH 479
N++ + +V M G+ + H F + +LV +L+ + G+ Y+
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV--GMLRGIAAGMRYLA 162
Query: 480 GKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTK-KKVHLFPPSTAYN-------LN 531
G++HR + A +IL++ N +C S +V P Y +
Sbjct: 163 DMGYVHRDLAARNILVNSN---------LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPF 568
W +PE ++ + SD++S GI E ++ G P+
Sbjct: 214 WTAPEAIQYR--KFTSASDVWSYGIVMWEVMSYGERPY 249
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
TD+ + E M HPNII + +++ M GS + + F
Sbjct: 49 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 108
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSP-TKK 167
+ +LV +L+ + +G++Y+ ++HR + A +IL++ N +C S
Sbjct: 109 VIQLV--GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN---------LVCKVSDFGMS 157
Query: 168 KVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPFA 219
+V P AY + W +PE + + SD++S GI E ++ G P+
Sbjct: 158 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYW 215
Query: 220 E 220
+
Sbjct: 216 D 216
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
TD+ + E M HPNII + +++ M GS + + F
Sbjct: 49 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 108
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSP-TKK 517
+ +LV +L+ + +G++Y+ ++HR + A +IL++ N +C S
Sbjct: 109 VIQLV--GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN---------LVCKVSDFGMS 157
Query: 518 KVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPFA 569
+V P AY + W +PE + + SD++S GI E ++ G P+
Sbjct: 158 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYW 215
Query: 570 E 570
+
Sbjct: 216 D 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 108 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK 167
GLP I +++ L GL+++H +HR +K +IL++ G L+ +S
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---Y 172
Query: 168 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
++ L P L + +PEVL Q+ Y D++SVG E+
Sbjct: 173 QMALTP--VVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEM 212
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKK 517
GLP I +++ L GL+++H +HR +K +IL++ G L+ +S
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS---Y 172
Query: 518 KVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
++ L P L + +PEVL Q+ Y D++SVG E+
Sbjct: 173 QMALTP--VVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEM 212
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH-ARFYAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIIC------------YISSFLDAT 83
Q +A+K D+ + HE + L+HPN++C I S+
Sbjct: 56 TQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 114
Query: 84 DLH----LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVK 139
DLH + SP GS D P+ V H++ + G+EY+ +H+ +
Sbjct: 115 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV--HLVAQIAAGMEYLSSHHVVHKDLA 172
Query: 140 ASHILISHNGKACLSGLR-YMCPFSPTKKKV---HLFPPSTAYNLNWLSPEVLEQNLDGY 195
++L+ +S L + ++ K+ L P + W++PE +
Sbjct: 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP------IRWMAPEAIMYGKFSI 226
Query: 196 DERSDIYSVGISCCEL-ANGTVPF 218
D SDI+S G+ E+ + G P+
Sbjct: 227 D--SDIWSYGVVLWEVFSYGLQPY 248
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIIC------------YISSFLDAT 433
Q +A+K D+ + HE + L+HPN++C I S+
Sbjct: 56 TQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 114
Query: 434 DLH----LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVK 489
DLH + SP GS D P+ V H++ + G+EY+ +H+ +
Sbjct: 115 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV--HLVAQIAAGMEYLSSHHVVHKDLA 172
Query: 490 ASHILISHNGKACLSGLR-YMCPFSPTKKKV---HLFPPSTAYNLNWLSPEVLEQNLDGY 545
++L+ +S L + ++ K+ L P + W++PE +
Sbjct: 173 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP------IRWMAPEAIMYGKFSI 226
Query: 546 DERSDIYSVGISCCEL-ANGTVPF 568
D SDI+S G+ E+ + G P+
Sbjct: 227 D--SDIWSYGVVLWEVFSYGLQPY 248
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 6 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE--DLKSLHHEIV 62
+P Y+I ++G + ++ Y K+ +++A+KK + R+ ++ D K + EI
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAY---DKLEKRVVAIKK--ILRVFEDLIDCKRILREIA 104
Query: 63 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLP----ELVICH 116
+ L H +++ LD V ++ ++ F F P EL I
Sbjct: 105 ILNRLNHDHVV----KVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT 160
Query: 117 ILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMC----------PFSP 164
+L ++L G++Y+H G +HR +K ++ L++ + K C GL P SP
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 165 TKKKVHLFPPSTAYNLN-----------WLSPE--VLEQNLDGYDERSDIYSVGISCCEL 211
+ ++L NL + +PE +L++N Y E D++S+G EL
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN---YTEAIDVWSIGCIFAEL 277
Query: 212 AN 213
N
Sbjct: 278 LN 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 356 NVPSNYKICSILGQ-CFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDE--DLKSLHHEIV 412
+P Y+I ++G + ++ Y K+ +++A+KK + R+ ++ D K + EI
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAY---DKLEKRVVAIKK--ILRVFEDLIDCKRILREIA 104
Query: 413 CMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN--FGLP----ELVICH 466
+ L H +++ LD V ++ ++ F F P EL I
Sbjct: 105 ILNRLNHDHVV----KVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT 160
Query: 467 ILQDVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMC----------PFSP 514
+L ++L G++Y+H G +HR +K ++ L++ + K C GL P SP
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 515 TKKKVHLFPPSTAYNLN-----------WLSPE--VLEQNLDGYDERSDIYSVGISCCEL 561
+ ++L NL + +PE +L++N Y E D++S+G EL
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN---YTEAIDVWSIGCIFAEL 277
Query: 562 AN 563
N
Sbjct: 278 LN 279
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIIC------------YISSFLDAT 83
Q +A+K D+ + HE + L+HPN++C I S+
Sbjct: 39 TQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 97
Query: 84 DLH----LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVK 139
DLH + SP GS D P+ V H++ + G+EY+ +H+ +
Sbjct: 98 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV--HLVAQIAAGMEYLSSHHVVHKDLA 155
Query: 140 ASHILISHNGKACLSGLR-YMCPFSPTKKKV---HLFPPSTAYNLNWLSPEVLEQNLDGY 195
++L+ +S L + ++ K+ L P + W++PE +
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP------IRWMAPEAIMYGKFSI 209
Query: 196 DERSDIYSVGISCCEL-ANGTVPF 218
D SDI+S G+ E+ + G P+
Sbjct: 210 D--SDIWSYGVVLWEVFSYGLQPY 231
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 32/204 (15%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIIC------------YISSFLDAT 433
Q +A+K D+ + HE + L+HPN++C I S+
Sbjct: 39 TQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG 97
Query: 434 DLH----LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVK 489
DLH + SP GS D P+ V H++ + G+EY+ +H+ +
Sbjct: 98 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV--HLVAQIAAGMEYLSSHHVVHKDLA 155
Query: 490 ASHILISHNGKACLSGLR-YMCPFSPTKKKV---HLFPPSTAYNLNWLSPEVLEQNLDGY 545
++L+ +S L + ++ K+ L P + W++PE +
Sbjct: 156 TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP------IRWMAPEAIMYGKFSI 209
Query: 546 DERSDIYSVGISCCEL-ANGTVPF 568
D SDI+S G+ E+ + G P+
Sbjct: 210 D--SDIWSYGVVLWEVFSYGLQPY 231
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 153
Query: 139 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 154 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP------VRWMAPESLKDGV-- 205
Query: 195 YDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 206 FTTSSDMWSFGVVLWEITS----LAEQP 229
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 153
Query: 489 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 154 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP------VRWMAPESLKDGV-- 205
Query: 545 YDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 206 FTTSSDMWSFGVVLWEITS----LAEQP 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 195 YDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 489 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 545 YDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY--ISSFLDATDLHLVSPLM 92
T + +AVK + + + L EI +R+L H NI+ Y I + + L+ +
Sbjct: 49 TGEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGK 150
GS K+ + + N + + + +Q + G++Y+ + ++HR + A ++L+ H K
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQ-ICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 166
Query: 151 ACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
GL T K+ + W +PE L Q+ + SD++S G++ E
Sbjct: 167 IGDFGLTKAI---ETDKEXXTVKDDRDSPVFWYAPECLMQS--KFYIASDVWSFGVTLHE 221
Query: 211 L 211
L
Sbjct: 222 L 222
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY--ISSFLDATDLHLVSPLM 442
T + +AVK + + + L EI +R+L H NI+ Y I + + L+ +
Sbjct: 49 TGEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGK 500
GS K+ + + N + + + +Q + G++Y+ + ++HR + A ++L+ H K
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQ-ICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 166
Query: 501 ACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
GL T K+ + W +PE L Q+ + SD++S G++ E
Sbjct: 167 IGDFGLTKAI---ETDKEXXTVKDDRDSPVFWYAPECLMQS--KFYIASDVWSFGVTLHE 221
Query: 561 L 561
L
Sbjct: 222 L 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 35 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY--ISSFLDATDLHLVSPLM 92
T + +AVK + + + L EI +R+L H NI+ Y I + + L+ +
Sbjct: 37 TGEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 93 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGK 150
GS K+ + + N + + + +Q + G++Y+ + ++HR + A ++L+ H K
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQ-ICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 154
Query: 151 ACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 210
GL T K+ + W +PE L Q+ + SD++S G++ E
Sbjct: 155 IGDFGLTKAI---ETDKEXXTVKDDRDSPVFWYAPECLMQS--KFYIASDVWSFGVTLHE 209
Query: 211 L 211
L
Sbjct: 210 L 210
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 11/181 (6%)
Query: 385 TNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICY--ISSFLDATDLHLVSPLM 442
T + +AVK + + + L EI +R+L H NI+ Y I + + L+ +
Sbjct: 37 TGEQVAVKSLKPESGGNH-IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 443 GFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGK 500
GS K+ + + N + + + +Q + G++Y+ + ++HR + A ++L+ H K
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQ-ICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 154
Query: 501 ACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE 560
GL T K+ + W +PE L Q+ + SD++S G++ E
Sbjct: 155 IGDFGLTKAI---ETDKEXXTVKDDRDSPVFWYAPECLMQS--KFYIASDVWSFGVTLHE 209
Query: 561 L 561
L
Sbjct: 210 L 210
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 123/319 (38%), Gaps = 37/319 (11%)
Query: 11 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 70
Y C ++G N V V + +A+KK + D+ K + E+ MR ++HP
Sbjct: 42 YTNCKVIG---NGSFGVVFQAKLVESDEVAIKKV----LQDKRFK--NRELQIMRIVKHP 92
Query: 71 NIICYISSFLDATD------LHLV---SPLMGFGSCKDLINAHFNFGLPELVICHILQDV 121
N++ + F D L+LV P + + + A +P L+I + +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY--AKLKQTMPMLLIKLYMYQL 150
Query: 122 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNL 180
L L YIH G HR +K ++L+ SG+ + F K + P S +
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLDPP-----SGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE--KLAGATPHL 238
+ +PE++ Y DI+S G EL G F L+E K+ G TP
Sbjct: 206 YYRAPELI-FGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG-TP-- 261
Query: 239 LDCTTYYVDTGQDDGEENACSYISEQQ-TQVLTSRKFSDSFHSIVELCLSRDVDKRPLAC 297
+ + T + E+ I ++V R D+ I L L R A
Sbjct: 262 ---SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRL-LEYTPSARLTAI 317
Query: 298 NLLQHAFFKQTKKCSVMLP 316
L H FF + + +P
Sbjct: 318 EALCHPFFDELRTGEARMP 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 27/214 (12%)
Query: 361 YKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHP 420
Y C ++G N V V + +A+KK + D+ K + E+ MR ++HP
Sbjct: 42 YTNCKVIG---NGSFGVVFQAKLVESDEVAIKKV----LQDKRFK--NRELQIMRIVKHP 92
Query: 421 NIICYISSFLDATD------LHLV---SPLMGFGSCKDLINAHFNFGLPELVICHILQDV 471
N++ + F D L+LV P + + + A +P L+I + +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY--AKLKQTMPMLLIKLYMYQL 150
Query: 472 LNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNL 530
L L YIH G HR +K ++L+ SG+ + F K + P S +
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLDPP-----SGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANG 564
+ +PE++ Y DI+S G EL G
Sbjct: 206 YYRAPELI-FGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 21/210 (10%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYD 196
K +++I G K GL K+V +L+PE++ GY+
Sbjct: 168 KPENLMIDQQGYIKVTDFGL---------AKRVKGRTWXLCGTPEYLAPEIILSK--GYN 216
Query: 197 ERSDIYSVGISCCELANGTVP-FAETPTTL 225
+ D +++G+ E+A G P FA+ P +
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 21/210 (10%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYD 546
K +++I G K GL K+V +L+PE++ GY+
Sbjct: 168 KPENLMIDQQGYIKVTDFGL---------AKRVKGRTWXLCGTPEYLAPEIILSK--GYN 216
Query: 547 ERSDIYSVGISCCELANGTVP-FAETPTTL 575
+ D +++G+ E+A G P FA+ P +
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 195 YDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 489 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 545 YDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P + S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P + S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P + S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P + S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 45 NLDRMTD-EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDL-HLVSPLMGFGSCKDLIN 102
+L R+T+ + +++ E + MR L HPN++ I L L H++ P M G I
Sbjct: 56 SLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR 115
Query: 103 AHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMC 160
+ + +I LQ V G+EY+ + F+HR + A + ++ S K GL
Sbjct: 116 SPQRNPTVKDLISFGLQ-VARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 161 ---PFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTV 216
+ ++ H P + W + E L+ + +SD++S G+ E L G
Sbjct: 175 LDREYYSVQQHRHARLP-----VKWTALESLQTY--RFTTKSDVWSFGVLLWELLTRGAP 227
Query: 217 PF 218
P+
Sbjct: 228 PY 229
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 395 NLDRMTD-EDLKSLHHEIVCMRHLRHPNIICYISSFLDATDL-HLVSPLMGFGSCKDLIN 452
+L R+T+ + +++ E + MR L HPN++ I L L H++ P M G I
Sbjct: 56 SLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR 115
Query: 453 AHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI--SHNGKACLSGLRYMC 510
+ + +I LQ V G+EY+ + F+HR + A + ++ S K GL
Sbjct: 116 SPQRNPTVKDLISFGLQ-VARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 511 ---PFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTV 566
+ ++ H P + W + E L+ + +SD++S G+ E L G
Sbjct: 175 LDREYYSVQQHRHARLP-----VKWTALESLQTY--RFTTKSDVWSFGVLLWELLTRGAP 227
Query: 567 PF 568
P+
Sbjct: 228 PY 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIQVTDF-------GLAKRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P ++ S
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKI--LDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFS 109
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 110 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 167
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ K+V +L+PE++ GY++
Sbjct: 168 KPENLMIDQQGYIQVTDF-------GLAKRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 218
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQI 246
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 23/181 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
TD+ + E M HPNII + +++ M GS + + F
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSP-TKK 167
+ +LV +L+ + +G++Y+ +HR + A +IL++ N +C S
Sbjct: 130 VIQLV--GMLRGIGSGMKYLSDMSAVHRDLAARNILVNSN---------LVCKVSDFGMS 178
Query: 168 KVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPFA 219
+V P AY + W +PE + + SD++S GI E ++ G P+
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYW 236
Query: 220 E 220
+
Sbjct: 237 D 237
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 23/181 (12%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
TD+ + E M HPNII + +++ M GS + + F
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSP-TKK 517
+ +LV +L+ + +G++Y+ +HR + A +IL++ N +C S
Sbjct: 130 VIQLV--GMLRGIGSGMKYLSDMSAVHRDLAARNILVNSN---------LVCKVSDFGMS 178
Query: 518 KVHLFPPSTAYN-------LNWLSPEVLEQNLDGYDERSDIYSVGISCCE-LANGTVPFA 569
+V P AY + W +PE + + SD++S GI E ++ G P+
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYW 236
Query: 570 E 570
+
Sbjct: 237 D 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKKK 168
E +I + Q V G+E++ + IHR + A +IL+S N K C GL +P
Sbjct: 199 EDLISYSFQ-VARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD--- 254
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
++ T L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 255 -YVRKGDTRLPLKWMAPESIFDKI--YSTKSDVWSYGVLLWEIFSLGGSPY 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSPTKKK 518
E +I + Q V G+E++ + IHR + A +IL+S N K C GL +P
Sbjct: 199 EDLISYSFQ-VARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD--- 254
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
++ T L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 255 -YVRKGDTRLPLKWMAPESIFDKI--YSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 155
Query: 139 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 156 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 207
Query: 195 YDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 208 FTTSSDMWSFGVVLWEITS----LAEQP 231
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 155
Query: 489 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 156 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 207
Query: 545 YDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 208 FTTSSDMWSFGVVLWEITS----LAEQP 231
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KASHILISHN-----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLD 193
A + +++H+ G ++ Y + K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETAYY-RKGGKGLLP------VRWMAPESLKDGV- 208
Query: 194 GYDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 209 -FTTSSDMWSFGVVLWEITS----LAEQP 232
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 489 KASHILISHN-----GKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLD 543
A + +++H+ G ++ Y + K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETAYY-RKGGKGLLP------VRWMAPESLKDGV- 208
Query: 544 GYDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 209 -FTTSSDMWSFGVVLWEITS----LAEQP 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 78
+ V L KH T A+K LD+ LK + H E ++ + P + S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 79 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 138
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 139 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 198
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 199 SDIYSVGISCCELANGTVP-FAETPTTL 225
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 17/208 (8%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH---EIVCMRHLRHPNIICYISS 428
+ V L KH T A+K LD+ LK + H E ++ + P + S
Sbjct: 53 GSFGRVMLVKHMETGNHYAMK--ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFS 110
Query: 429 FLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAV 488
F D ++L++V G + F P + Q VL EY+H I+R +
Sbjct: 111 FKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLT-FEYLHSLDLIYRDL 168
Query: 489 KASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDER 548
K +++I G ++ + K+V +L+PE++ GY++
Sbjct: 169 KPENLMIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSK--GYNKA 219
Query: 549 SDIYSVGISCCELANGTVP-FAETPTTL 575
D +++G+ E+A G P FA+ P +
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQI 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 139 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 195 YDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDL 156
Query: 489 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 545 YDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 340 MFNINDTFNSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRM 399
+ I D FN Y + LG + + S+V+LS + +A+K + +
Sbjct: 28 LVKIGDLFNG----------RYHVIRKLG--WGHFSTVWLSWDIQGKKFVAMK---VVKS 72
Query: 400 TDEDLKSLHHEIVCMRHLRH-----PN---IICYISSF----LDATDLHLVSPLMGFGSC 447
+ ++ EI ++ +R+ PN ++ + F ++ T + +V ++G
Sbjct: 73 AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLL 132
Query: 448 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISHN 498
K +I +++ GLP + I+Q VL GL+Y+H K IH +K +IL+S N
Sbjct: 133 KWIIKSNYQ-GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
Y + LG + + S+V+LS + +A+K + + + ++ EI ++ +R
Sbjct: 37 GRYHVIRKLG--WGHFSTVWLSWDIQGKKFVAMK---VVKSAEHYTETALDEIRLLKSVR 91
Query: 69 H-----PN---IICYISSF----LDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICH 116
+ PN ++ + F ++ T + +V ++G K +I +++ GLP +
Sbjct: 92 NSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQ-GLPLPCVKK 150
Query: 117 ILQDVLNGLEYIHGK-GFIHRAVKASHILISHN 148
I+Q VL GL+Y+H K IH +K +IL+S N
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNL 156
Query: 139 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 195 YDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNL 156
Query: 489 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 208
Query: 545 YDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 209 FTTSSDMWSFGVVLWEITS----LAEQP 232
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 87 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 138
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 98 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNL 157
Query: 139 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 194
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 158 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 209
Query: 195 YDERSDIYSVGISCCELANGTVPFAETP 222
+ SD++S G+ E+ + AE P
Sbjct: 210 FTTSSDMWSFGVVLWEITS----LAEQP 233
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 437 LVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQ---DVLNGLEYIHGKGFIHRAV 488
+V LM G K + A N G P + ++Q ++ +G+ Y++ K F+HR +
Sbjct: 98 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNL 157
Query: 489 KASHILISHNGKACLSGLRYMCPFSPT----KKKVHLFPPSTAYNLNWLSPEVLEQNLDG 544
A + +++H+ + T K L P + W++PE L+ +
Sbjct: 158 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP------VRWMAPESLKDGV-- 209
Query: 545 YDERSDIYSVGISCCELANGTVPFAETP 572
+ SD++S G+ E+ + AE P
Sbjct: 210 FTTSSDMWSFGVVLWEITS----LAEQP 233
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 144 EHLICYSFQ-VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 203 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 247
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 144 EHLICYSFQ-VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 203 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 122
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
++ G +Y+H IHR +K ++ ++ + + + GL + +KKV P
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP--- 179
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ D++S+G L G PF
Sbjct: 180 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 215
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 122
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
++ G +Y+H IHR +K ++ ++ + + + GL + +KKV P
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP--- 179
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ D++S+G L G PF
Sbjct: 180 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV- 169
E ++C Q V G+E++ K +HR + A ++L++H GK +C F + +
Sbjct: 172 EDLLCFAYQ-VAKGMEFLEFKSCVHRDLAARNVLVTH-GKVVK-----ICDFGLARDIMS 224
Query: 170 ---HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
++ + + W++PE L + + Y +SD++S GI E+ + G P+ P
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGI--YTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV- 519
E ++C Q V G+E++ K +HR + A ++L++H GK +C F + +
Sbjct: 172 EDLLCFAYQ-VAKGMEFLEFKSCVHRDLAARNVLVTH-GKVVK-----ICDFGLARDIMS 224
Query: 520 ---HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
++ + + W++PE L + + Y +SD++S GI E+ + G P+ P
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGI--YTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 340 MFNINDTFNSSVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRM 399
+ I D FN Y + LG + + S+V+LS + +A+K + +
Sbjct: 12 LVKIGDLFNG----------RYHVIRKLG--WGHFSTVWLSWDIQGKKFVAMK---VVKS 56
Query: 400 TDEDLKSLHHEIVCMRHLRH-----PN---IICYISSF----LDATDLHLVSPLMGFGSC 447
+ ++ EI ++ +R+ PN ++ + F ++ T + +V ++G
Sbjct: 57 AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLL 116
Query: 448 KDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILISHN 498
K +I +++ GLP + I+Q VL GL+Y+H K IH +K +IL+S N
Sbjct: 117 KWIIKSNYQ-GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 167
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
Y + LG + + S+V+LS + +A+K + + + ++ EI ++ +R
Sbjct: 21 GRYHVIRKLG--WGHFSTVWLSWDIQGKKFVAMK---VVKSAEHYTETALDEIRLLKSVR 75
Query: 69 H-----PN---IICYISSF----LDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICH 116
+ PN ++ + F ++ T + +V ++G K +I +++ GLP +
Sbjct: 76 NSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQ-GLPLPCVKK 134
Query: 117 ILQDVLNGLEYIHGK-GFIHRAVKASHILISHN 148
I+Q VL GL+Y+H K IH +K +IL+S N
Sbjct: 135 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 167
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 146
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
++ G +Y+H IHR +K ++ ++ + + + GL + +KKV P
Sbjct: 147 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP--- 203
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ D++S+G L G PF
Sbjct: 204 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 239
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 146
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
++ G +Y+H IHR +K ++ ++ + + + GL + +KKV P
Sbjct: 147 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP--- 203
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ D++S+G L G PF
Sbjct: 204 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVR 206
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 49 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 100
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 214
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 215 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 262
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 49 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 100
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 161 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 214
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 215 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 262
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 34 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 85
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 199
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 200 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 247
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 34 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 85
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 146 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 199
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 200 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 247
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 26 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 77
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 191
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 192 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 239
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 26 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 77
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 138 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 191
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 192 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 239
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 22/228 (9%)
Query: 350 SVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH 409
S+ L N+ +ILG+ VY + L+AVK+ +R +L+
Sbjct: 29 SLRELQVASDNFSNKNILGR--GGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQ-FQT 84
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC----KDLINAHFNFGLPELVIC 465
E+ + H N++ + T+ LV P M GS ++ + P+
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR--Q 142
Query: 466 HILQDVLNGLEYIHG---KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVH 520
I GL Y+H IHR VKA++IL+ +A + GL + + K H
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----KDXH 198
Query: 521 LFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + + ++PE L E++D++ G+ EL G F
Sbjct: 199 VX-XAVRGTIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAF 243
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 22/227 (9%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+ L N+ +ILG+ VY + L+AVK+ +R +L+ E
Sbjct: 30 LRELQVASDNFSNKNILGR--GGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQ-FQTE 85
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC----KDLINAHFNFGLPELVICH 116
+ + H N++ + T+ LV P M GS ++ + P+
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR--QR 143
Query: 117 ILQDVLNGLEYIHG---KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHL 171
I GL Y+H IHR VKA++IL+ +A + GL + + K H+
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----KDXHV 199
Query: 172 FPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + ++PE L E++D++ G+ EL G F
Sbjct: 200 X-XAVRGTIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAF 243
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + EI R L H +++ + F D + +V L S +L PE
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR- 144
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 172
+ L+ ++ G +Y+H IHR +K ++ ++ + + + GL + +KKV
Sbjct: 145 -YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 203
Query: 173 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
P N+++PEVL + G+ D++S+G L G PF
Sbjct: 204 TP------NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 241
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 12/166 (7%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + EI R L H +++ + F D + +V L S +L PE
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR- 144
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLF 522
+ L+ ++ G +Y+H IHR +K ++ ++ + + + GL + +KKV
Sbjct: 145 -YYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 203
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
P N+++PEVL + G+ D++S+G L G PF
Sbjct: 204 TP------NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 20/216 (9%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEIVCMRHL 67
+++ +LG+ + V LS+ K T++L AVK D + D+D++ E +
Sbjct: 20 TDFNFLMVLGK--GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 68 RHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
P + + S D L+ V + G I F P V ++ GL
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLF 135
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 182
++ KG I+R +K ++++ G ++ MC K +++ T ++
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFG-MC-------KENIWDGVTTKXFCGTPDY 187
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++PE++ Y + D ++ G+ E+ G PF
Sbjct: 188 IAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPF 221
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 20/216 (9%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEIVCMRHL 417
+++ +LG+ + V LS+ K T++L AVK D + D+D++ E +
Sbjct: 20 TDFNFLMVLGK--GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 418 RHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
P + + S D L+ V + G I F P V ++ GL
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLF 135
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 532
++ KG I+R +K ++++ G ++ MC K +++ T ++
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFG-MC-------KENIWDGVTTKXFCGTPDY 187
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE++ Y + D ++ G+ E+ G PF
Sbjct: 188 IAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ +R + H N+I + + TD+ L+ L+ G D + + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ +R + H N+I + + TD+ L+ L+ G D + + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 198 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 256
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 257 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 198 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 256
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 257 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 301
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 57 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 108
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 222
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 223 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 270
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 57 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 108
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 169 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 222
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 223 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 270
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ +R + H N+I + + TD+ L+ L+ G D + + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ +R + H N+I + + TD+ L+ L+ G D + + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ +R + H N+I + + TD+ L+ L+ G D + + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ +R + H N+I + + TD+ L+ L+ G D + + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 55 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 106
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 220
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 221 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 268
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 55 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 106
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 220
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 221 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 268
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 186
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 187 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 186
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 187 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 166
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 167 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 516
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 517 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 206
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 166
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 167 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 516
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 148 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 517 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 207 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 200 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 258
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 259 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 303
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 200 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 258
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 259 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 303
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ +R + H N+I + + TD+ L+ L+ G D + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEA 117
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ +R + H N+I + + TD+ L+ L+ G D + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEA 117
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 59 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 110
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 224
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 225 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 272
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 59 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 110
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 171 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 224
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 225 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 272
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 100 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 151
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 265
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 266 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 313
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 100 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 151
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 212 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 265
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 266 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 313
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 150 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 209 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 253
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 150 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 208
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 209 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 114
+ + E+ +R + H N+I + + TD+ L+ L+ G D + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEA 117
Query: 115 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 168
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 169 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVI 464
+ + E+ +R + H N+I + + TD+ L+ L+ G D + L E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ--KESLSEEEA 117
Query: 465 CHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG------KACLSGLRYMCPFSPTKKK 518
++ +L+G+ Y+H K H +K +I++ K GL + K
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 519 VHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ P +++PE++ N + +D++S+G+ L +G PF
Sbjct: 178 IFGTP-------EFVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATD-----LHLVSPLMGFGSCKDLINAHFNFGL 109
K + EI + H HPNI+ F+ + L+LV+ LM +I+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVIS 132
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
P+ I + + +L GL +H G +HR + +IL++ N + C F+ ++
Sbjct: 133 PQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI------CDFNLAREDT 185
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ W L G+ + D++S G E+ N F + L
Sbjct: 186 ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
Query: 228 IEKLAGATPHLLDCTTYYVDTGQD 251
I ++ G TP + D + + +D
Sbjct: 246 IVEVVG-TPKIEDVVMFSSPSARD 268
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATD-----LHLVSPLMGFGSCKDLINAHFNFGL 459
K + EI + H HPNI+ F+ + L+LV+ LM +I+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVIS 132
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
P+ I + + +L GL +H G +HR + +IL++ N + C F+ ++
Sbjct: 133 PQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI------CDFNLAREDT 185
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ W L G+ + D++S G E+ N F + L
Sbjct: 186 ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
Query: 578 IEKLAGATPHLLDCTTYYVDTGQD 601
I ++ G TP + D + + +D
Sbjct: 246 IVEVVG-TPKIEDVVMFSSPSARD 268
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 191 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 249
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 250 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 294
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 191 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 249
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 250 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 294
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 166
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 167 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 516
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 517 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 166
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 167 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TK 516
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL P +
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 517 KKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K P L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARLP------LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 193 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 252 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 296
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 193 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 252 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 296
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 139 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 198 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 111 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 165
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 185 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 244 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 288
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 16/114 (14%)
Query: 461 ELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLR---YMCPFSPT 515
E +IC+ Q V G+E++ + IHR + A +IL+S K C GL Y P
Sbjct: 185 EHLICYSFQ-VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
K L L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 244 KGDARL-------PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 55 KSLHHEIVCMRHLRHPNIICYISSFLDATD-----LHLVSPLMGFGSCKDLINAHFNFGL 109
K + EI + H HPNI+ F+ + L+LV+ LM +I+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVIS 132
Query: 110 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 169
P+ I + + +L GL +H G +HR + +IL++ N + C F+ ++
Sbjct: 133 PQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI------CDFNLAREDT 185
Query: 170 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 227
+ W L G+ + D++S G E+ N F + L
Sbjct: 186 ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
Query: 228 IEKLAGATPHLLDCTTYYVDTGQD 251
I ++ G TP + D + + +D
Sbjct: 246 IVEVVG-TPKIEDVVMFSSPSARD 268
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 405 KSLHHEIVCMRHLRHPNIICYISSFLDATD-----LHLVSPLMGFGSCKDLINAHFNFGL 459
K + EI + H HPNI+ F+ + L+LV+ LM +I+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVIS 132
Query: 460 PELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKV 519
P+ I + + +L GL +H G +HR + +IL++ N + C F+ ++
Sbjct: 133 PQH-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI------CDFNLAREDT 185
Query: 520 HLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP--TTLML 577
+ W L G+ + D++S G E+ N F + L
Sbjct: 186 ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245
Query: 578 IEKLAGATPHLLDCTTYYVDTGQD 601
I ++ G TP + D + + +D
Sbjct: 246 IVEVVG-TPKIEDVVMFSSPSARD 268
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 22/228 (9%)
Query: 350 SVETLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHH 409
S+ L N+ +ILG+ VY + L+AVK+ +R +L+
Sbjct: 21 SLRELQVASDNFXNKNILGR--GGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQ-FQT 76
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC----KDLINAHFNFGLPELVIC 465
E+ + H N++ + T+ LV P M GS ++ + P+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR--Q 134
Query: 466 HILQDVLNGLEYIHG---KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVH 520
I GL Y+H IHR VKA++IL+ +A + GL + + K H
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----KDXH 190
Query: 521 LFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
+ + + ++PE L E++D++ G+ EL G F
Sbjct: 191 VX-XAVRGXIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAF 235
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 22/227 (9%)
Query: 1 METLDNVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHE 60
+ L N+ +ILG+ VY + L+AVK+ +R +L+ E
Sbjct: 22 LRELQVASDNFXNKNILGR--GGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQ-FQTE 77
Query: 61 IVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSC----KDLINAHFNFGLPELVICH 116
+ + H N++ + T+ LV P M GS ++ + P+
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR--QR 135
Query: 117 ILQDVLNGLEYIHG---KGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHL 171
I GL Y+H IHR VKA++IL+ +A + GL + + K H+
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY----KDXHV 191
Query: 172 FPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
+ + ++PE L E++D++ G+ EL G F
Sbjct: 192 X-XAVRGXIGHIAPEYLSTGKSS--EKTDVFGYGVMLLELITGQRAF 235
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 70 PNIICYISSFLDATD----LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
P+I+C + + + L ++ M G I + E I++D+ +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
+++H HR VK ++L + K + L F K+ + Y +++P
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKL---TDFGFAKETTQNALQTPCYTPYYVAP 179
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
EVL + YD+ D++S+G+ L G PF
Sbjct: 180 EVL--GPEKYDKSCDMWSLGVIMYILLCGFPPF 210
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 420 PNIICYISSFLDATD----LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
P+I+C + + + L ++ M G I + E I++D+ +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
+++H HR VK ++L + K + L F K+ + Y +++P
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKL---TDFGFAKETTQNALQTPCYTPYYVAP 179
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
EVL + YD+ D++S+G+ L G PF
Sbjct: 180 EVL--GPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L LV LM G K I G PE ++ GLE +H + ++R +K +IL
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 145 ISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIY 202
+ +G +S GL P T K + +++PEV++ + Y D +
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIK-------GRVGTVGYMAPEVVKN--ERYTFSPDWW 369
Query: 203 SVGISCCELANGTVPFAETPTTLML--IEKLAGATPH 237
++G E+ G PF + + +E+L P
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE 406
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
L LV LM G K I G PE ++ GLE +H + ++R +K +IL
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 495 ISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIY 552
+ +G +S GL P T K + +++PEV++ + Y D +
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIK-------GRVGTVGYMAPEVVKN--ERYTFSPDWW 369
Query: 553 SVGISCCELANGTVPFAETPTTLML--IEKLAGATPH 587
++G E+ G PF + + +E+L P
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE 406
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 20/216 (9%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEIVCMRHL 67
+++ +LG+ + V LS+ K T++L AVK D + D+D++ E +
Sbjct: 341 TDFNFLMVLGK--GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 68 RHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 126
P + + S D L+ V + G I F P V ++ GL
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLF 456
Query: 127 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 182
++ KG I+R +K ++++ G ++ MC K +++ T ++
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFG-MC-------KENIWDGVTTKXFCGTPDY 508
Query: 183 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
++PE++ Y + D ++ G+ E+ G PF
Sbjct: 509 IAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPF 542
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 20/216 (9%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDR-MTDEDLKSLHHEIVCMRHL 417
+++ +LG+ + V LS+ K T++L AVK D + D+D++ E +
Sbjct: 341 TDFNFLMVLGK--GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 418 RHPNIICYISSFLDATD-LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLE 476
P + + S D L+ V + G I F P V ++ GL
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLF 456
Query: 477 YIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL----NW 532
++ KG I+R +K ++++ G ++ MC K +++ T ++
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEGHIKIADFG-MC-------KENIWDGVTTKXFCGTPDY 508
Query: 533 LSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
++PE++ Y + D ++ G+ E+ G PF
Sbjct: 509 IAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L LV LM G K I G PE ++ GLE +H + ++R +K +IL
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 145 ISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIY 202
+ +G +S GL P T K + +++PEV++ + Y D +
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIK-------GRVGTVGYMAPEVVKN--ERYTFSPDWW 369
Query: 203 SVGISCCELANGTVPFAETPTTLML--IEKLAGATPH 237
++G E+ G PF + + +E+L P
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE 406
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 13/157 (8%)
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
L LV LM G K I G PE ++ GLE +H + ++R +K +IL
Sbjct: 259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENIL 318
Query: 495 ISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIY 552
+ +G +S GL P T K + +++PEV++ + Y D +
Sbjct: 319 LDDHGHIRISDLGLAVHVPEGQTIK-------GRVGTVGYMAPEVVKN--ERYTFSPDWW 369
Query: 553 SVGISCCELANGTVPFAETPTTLML--IEKLAGATPH 587
++G E+ G PF + + +E+L P
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE 406
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 70 PNIICYISSFLDATD----LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 125
P+I+C + + + L ++ M G I + E I++D+ +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 185
+++H HR VK ++L + K + L F K+ + Y +++P
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKL---TDFGFAKETTQNALQTPCYTPYYVAP 198
Query: 186 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
EVL + YD+ D++S+G+ L G PF
Sbjct: 199 EVL--GPEKYDKSCDMWSLGVIMYILLCGFPPF 229
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 420 PNIICYISSFLDATD----LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGL 475
P+I+C + + + L ++ M G I + E I++D+ +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
+++H HR VK ++L + K + L F K+ + Y +++P
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKL---TDFGFAKETTQNALQTPCYTPYYVAP 198
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
EVL + YD+ D++S+G+ L G PF
Sbjct: 199 EVL--GPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 33 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 84
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 200 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 246
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 33 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 84
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 200 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 246
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 55 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 106
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 222 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 268
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 55 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 106
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 167 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 222 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 268
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
T+ + E M HPNII ++ + +++ M G+ + + F
Sbjct: 57 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 116
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPT 165
+ +LV +L+ + +G+ Y+ ++HR + A +IL++ N K GL R++ S
Sbjct: 117 VIQLV--GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 166 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP 222
+ + W +PE + + SD +S GI E+ + F E P
Sbjct: 175 PTETSSL--GGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVMS----FGERP 223
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
T+ + E M HPNII ++ + +++ M G+ + + F
Sbjct: 57 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 116
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGL-RYMCPFSPT 515
+ +LV +L+ + +G+ Y+ ++HR + A +IL++ N K GL R++ S
Sbjct: 117 VIQLV--GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 516 KKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP 572
+ + W +PE + + SD +S GI E+ + F E P
Sbjct: 175 PTETSSL--GGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVMS----FGERP 223
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 33 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 84
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 200 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 246
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 33 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 84
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 145 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 200 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 246
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 94
+AVK F+ DE EI LRH NI+ +I+S + +T L L++
Sbjct: 34 VAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEH 90
Query: 95 GSCKDLIN-----AHFNFGLPELVICHILQDVLNGLEYIH-------GKGFI-HRAVKAS 141
GS D + H L C GL ++H GK I HR K+
Sbjct: 91 GSLYDFLQRQTLEPHLALRLAVSAAC--------GLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 142 HILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--E 197
++L+ N + C++ L S + + +++PEVL++ + D ++ +
Sbjct: 143 NVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYK 202
Query: 198 RSDIYSVGISCCELANGTV 216
+DI++ G+ E+A T+
Sbjct: 203 WTDIWAFGLVLWEIARRTI 221
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 32/199 (16%)
Query: 389 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFL----DATDLHLVSPLMGF 444
+AVK F+ DE EI LRH NI+ +I+S + +T L L++
Sbjct: 34 VAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEH 90
Query: 445 GSCKDLIN-----AHFNFGLPELVICHILQDVLNGLEYIH-------GKGFI-HRAVKAS 491
GS D + H L C GL ++H GK I HR K+
Sbjct: 91 GSLYDFLQRQTLEPHLALRLAVSAAC--------GLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 492 HILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNL--DGYD--E 547
++L+ N + C++ L S + + +++PEVL++ + D ++ +
Sbjct: 143 NVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYK 202
Query: 548 RSDIYSVGISCCELANGTV 566
+DI++ G+ E+A T+
Sbjct: 203 WTDIWAFGLVLWEIARRTI 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 40 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 91
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 207 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 253
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 40 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 91
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 152 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 207 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 253
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 25 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 76
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 192 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 238
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 25 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 76
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 137 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 192 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 238
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 22 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 73
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 189 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 235
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 22 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 73
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 134 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 189 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 29 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 80
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 195
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 196 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 242
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 29 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 80
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 141 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 195
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 196 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 242
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA---ETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 245
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 246 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 304 QERLTALEAMTHPYFQQVRAAE 325
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA---ETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 245
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 246 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 304 QERLTALEAMTHPYFQQVRAAE 325
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA---ETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 245
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 246 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 304 QERLTALEAMTHPYFQQVRAAE 325
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 188 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 188 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 112/287 (39%), Gaps = 37/287 (12%)
Query: 304 FFKQTKKCSVMLPELLRPALSLNESNVCEINNELECMFNINDTF---NSSVETLDNVPSN 360
+ ++ ++ M EL P L++ I + +N N +F SS+ L VP
Sbjct: 2 YRRKHQELQAMQMELQSPEYKLSKLRTSTIMTD----YNPNYSFAGKTSSISDLKEVPRK 57
Query: 361 YKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMR 415
I I G VY + + + +AVK + +++D E + +
Sbjct: 58 -NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIIS 115
Query: 416 HLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQD 470
H NI+ I L + ++ LM G K + L L + H+ +D
Sbjct: 116 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR--------YMCPFSPTKKKVHLF 522
+ G +Y+ FIHR + A + L++ G ++ + Y + K +
Sbjct: 176 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAML 234
Query: 523 PPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
P + W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 235 P------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 273
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 219
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 220 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 270
Query: 216 VPF 218
+P+
Sbjct: 271 MPY 273
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 124
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
++ G +Y+H IHR +K ++ ++ + + + GL + +KK P
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP--- 181
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ D++S+G L G PF
Sbjct: 182 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 217
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 124
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
++ G +Y+H IHR +K ++ ++ + + + GL + +KK P
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP--- 181
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ D++S+G L G PF
Sbjct: 182 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 188 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 188 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA---ETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 245
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 246 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 304 QERLTALEAMTHPYFQQVRAAE 325
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 87 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 139
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 190
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 191 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 246
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 247 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 305 QERLTALEAMTHPYFQQVRAAE 326
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 87 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 139
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 190
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 191 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 34/239 (14%)
Query: 342 NINDTFNSSVETLDNVP-SNYKICSI-LGQCFNNLSSVYLSKHKVTNQ-----LIAVKKF 394
+IND +SS VP +Y++ + L + NN +L H V + L K
Sbjct: 11 SINDALSSSYL----VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 395 NLDRMTDEDLKSLHHEIVCMRHL---RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLI 451
L R T E + + + L RHP+++ I + ++ L+ M G+ K +
Sbjct: 67 ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL 126
Query: 452 NAHFNFGLPELVIC-----HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL 506
+ LP + + I GL Y+H + IHR VK+ +IL+ N +
Sbjct: 127 ---YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN------FV 177
Query: 507 RYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ F +KK L L ++ PE + E+SD+YS G+ E+
Sbjct: 178 PKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEV 234
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC-----HILQDVL 122
RHP+++ I + ++ L+ M G+ K + + LP + + I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIGAA 149
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHL----FPPSTAY 178
GL Y+H + IHR VK+ +IL+ N + + F +KK L
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDEN------FVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 179 NLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
L ++ PE + E+SD+YS G+ E+
Sbjct: 204 TLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEV 234
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA---ETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 245
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 246 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 304 QERLTALEAMTHPYFQQVRAAE 325
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 34/239 (14%)
Query: 342 NINDTFNSSVETLDNVP-SNYKICSI-LGQCFNNLSSVYLSKHKVTNQ-----LIAVKKF 394
+IND +SS VP +Y++ + L + NN +L H V + L K
Sbjct: 11 SINDALSSSYL----VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV 66
Query: 395 NLDRMTDEDLKSLHHEIVCMRHL---RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLI 451
L R T E + + + L RHP+++ I + ++ L+ M G+ K +
Sbjct: 67 ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL 126
Query: 452 NAHFNFGLPELVIC-----HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGL 506
+ LP + + I GL Y+H + IHR VK+ +IL+ N +
Sbjct: 127 ---YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN------FV 177
Query: 507 RYMCPFSPTKKKVHL----FPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 561
+ F +KK L L ++ PE + E+SD+YS G+ E+
Sbjct: 178 PKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEV 234
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 20/153 (13%)
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVIC-----HILQDVL 122
RHP+++ I + ++ L+ M G+ K + + LP + + I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL---YGSDLPTMSMSWEQRLEICIGAA 149
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHL----FPPSTAY 178
GL Y+H + IHR VK+ +IL+ N + + F +KK L
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDEN------FVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 179 NLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL 211
L ++ PE + E+SD+YS G+ E+
Sbjct: 204 TLGYIDPEYFIKGR--LTEKSDVYSFGVVLFEV 234
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 124
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
++ G +Y+H IHR +K ++ ++ + + + GL + +KK P
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP--- 181
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ D++S+G L G PF
Sbjct: 182 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 217
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 124
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
++ G +Y+H IHR +K ++ ++ + + + GL + +KK P
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP--- 181
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ D++S+G L G PF
Sbjct: 182 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 33/250 (13%)
Query: 341 FNINDTF---NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVK 392
+N N +F SS+ L VP I I G VY + + + +AVK
Sbjct: 9 YNPNYSFAGKTSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 393 KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN 452
+ +++D E + + L H NI+ I L + ++ LM G K +
Sbjct: 68 TLP-EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 126
Query: 453 -----AHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 508 --------YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
Y + K + P + W+ PE + + + ++D +S G+
Sbjct: 187 DFGMARDIYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLW 237
Query: 560 ELAN-GTVPF 568
E+ + G +P+
Sbjct: 238 EIFSLGYMPY 247
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + L H NI+ I L + ++ LM G K +
Sbjct: 74 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 194 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 244
Query: 216 VPF 218
+P+
Sbjct: 245 MPY 247
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 149
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP--- 206
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 207 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 149
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTP--- 206
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 207 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 87 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 139
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 190
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA---ETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 191 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 246
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 247 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 305 QERLTALEAMTHPYFQQVRAAE 326
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 87 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 139
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 190
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 191 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 88 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 140
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 141 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 191
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
PE+L +L YD D++S+G + PF
Sbjct: 192 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 88 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 140
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 141 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 191
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 192 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 100/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPFA---ETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 245
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFH-------SIVELCLSRDV 290
D Y++ + + + + + + +D+ H ++ L D
Sbjct: 246 --DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 304 QERLTALEAMTHPYFQQVRAAE 325
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 86 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 138
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 189
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 190 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 128
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
++ G +Y+H IHR +K ++ ++ + + + GL + +KK P
Sbjct: 129 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP--- 185
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ D++S+G L G PF
Sbjct: 186 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 221
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI R L H +++ + F D + +V L S +L PE + L+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLR 128
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
++ G +Y+H IHR +K ++ ++ + + + GL + +KK P
Sbjct: 129 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTP--- 185
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ D++S+G L G PF
Sbjct: 186 ---NYIAPEVLSKK--GHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 149
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP--- 206
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 207 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 149
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTP--- 206
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 207 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 101/262 (38%), Gaps = 41/262 (15%)
Query: 70 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 125
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 107 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 159
Query: 126 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 184
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 160 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 210
Query: 185 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPH 237
PE+L +L YD D++S+G + PF + L+ I K+ G
Sbjct: 211 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT--- 266
Query: 238 LLDCTTYYVDTGQDDGEENACSYISEQQTQVLTSRKFSDSFHSI-------VELCLSRDV 290
D Y++ + + + + + + +D+ H + ++ L D
Sbjct: 267 --DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 324
Query: 291 DKRPLACNLLQHAFFKQTKKCS 312
+R A + H +F+Q +
Sbjct: 325 QERLTALEAMTHPYFQQVRAAE 346
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 420 PNIICYISSFLD-ATDLHLVSPLMGFGSCKDLINAHFNFGLPELV---ICHILQDVLNGL 475
PNI+ LD D H +P + F N F P L I + + ++L L
Sbjct: 107 PNIV----KLLDIVRDQHSKTPSLIFEYVN---NTDFKVLYPTLTDYDIRYYIYELLKAL 159
Query: 476 EYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS- 534
+Y H +G +HR VK +++I H L LR + + P YN+ S
Sbjct: 160 DYCHSQGIMHRDVKPHNVMIDHE----LRKLRLI-----DWGLAEFYHPGKEYNVRVASR 210
Query: 535 ----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
PE+L +L YD D++S+G + PF
Sbjct: 211 YFKGPELL-VDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 133
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 134 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--- 190
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 191 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 226
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 133
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 134 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--- 190
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 191 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 108
T+ + E M HPNII ++ + +++ M G+ + + F
Sbjct: 55 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 114
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFS-- 163
+ +LV +L+ + +G+ Y+ ++HR + A +IL++ N +S GL R++ S
Sbjct: 115 VIQLV--GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 172
Query: 164 PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP 222
PT + + W +PE + + SD +S GI E+ + F E P
Sbjct: 173 PT----YTSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVMS----FGERP 221
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 400 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH-FNFG 458
T+ + E M HPNII ++ + +++ M G+ + + F
Sbjct: 55 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 114
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GL-RYMCPFS-- 513
+ +LV +L+ + +G+ Y+ ++HR + A +IL++ N +S GL R++ S
Sbjct: 115 VIQLV--GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 172
Query: 514 PTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETP 572
PT + + W +PE + + SD +S GI E+ + F E P
Sbjct: 173 PT----YTSSLGGKIPIRWTAPEAIA--FRKFTSASDAWSYGIVMWEVMS----FGERP 221
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H KG +HR VK +++I H K GL
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL--------- 179
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P+ YN+ S PE+L + YD D++S+G + PF
Sbjct: 180 ---AEFYHPAQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRREPFFH 235
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYYVD 247
+ L+ I K+ G Y++D
Sbjct: 236 GQDNYDQLVRIAKVLGTEELYGYLKKYHID 265
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H KG +HR VK +++I H K GL
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL--------- 179
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P+ YN+ S PE+L + YD D++S+G + PF
Sbjct: 180 ---AEFYHPAQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRREPFFH 235
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYYVD 597
+ L+ I K+ G Y++D
Sbjct: 236 GQDNYDQLVRIAKVLGTEELYGYLKKYHID 265
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H KG +HR VK +++I H K GL
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL--------- 184
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P+ YN+ S PE+L + YD D++S+G + PF
Sbjct: 185 ---AEFYHPAQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRREPFFH 240
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYYVD 247
+ L+ I K+ G Y++D
Sbjct: 241 GQDNYDQLVRIAKVLGTEELYGYLKKYHID 270
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H KG +HR VK +++I H K GL
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGL--------- 184
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P+ YN+ S PE+L + YD D++S+G + PF
Sbjct: 185 ---AEFYHPAQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRREPFFH 240
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYYVD 597
+ L+ I K+ G Y++D
Sbjct: 241 GQDNYDQLVRIAKVLGTEELYGYLKKYHID 270
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 26/230 (11%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 70 PNIICYISSFL------DATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQD 120
NI+ F D L+LV L + H++ LP + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLV--LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYN 179
+ L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 180 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 186 RYYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 26/230 (11%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + D+ K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQDKRFK--NRELQIMRKLDH 72
Query: 420 PNIICYISSFL------DATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQD 470
NI+ F D L+LV L + H++ LP + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLV--LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYN 529
+ L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 530 LNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 186 RYYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 60 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 119
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 149
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 177
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--- 206
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 207 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 242
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 410 EIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQ 469
EI + L +P+++ + F D +++V + S +L PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR--YFMR 149
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNGKACLS--GLRYMCPFSPTKKKVHLFPPSTA 527
+ G++Y+H IHR +K ++ ++ + + GL F +KK P
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTP--- 206
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
N+++PEVL + G+ DI+S+G L G PF
Sbjct: 207 ---NYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 30/240 (12%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDE 402
SS+ L VP I I G VY + + + +AVK + +++
Sbjct: 33 TSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQ 90
Query: 403 DLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNF 457
D E + + L H NI+ I L + ++ LM G K +
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR--------YM 509
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ + Y
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 510 CPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ K + P + W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 211 ASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 261
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + L H NI+ I L + ++ LM G K +
Sbjct: 88 SEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 208 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 258
Query: 216 VPF 218
+P+
Sbjct: 259 MPY 261
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 58/289 (20%)
Query: 36 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLV-----S 89
N+ +AVK R+ E E+ +R HPN+I Y + D ++ +
Sbjct: 48 NRDVAVK-----RILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA 102
Query: 90 PLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH-N 148
L + KD AH GL + + LQ +GL ++H +HR +K +ILIS N
Sbjct: 103 TLQEYVEQKDF--AHL--GLEPITL---LQQTTSGLAHLHSLNIVHRDLKPHNILISMPN 155
Query: 149 GKACLSGLRYMCPFSPTKKKV---HLFPPSTAY--NLNWLSPEVLEQN-LDGYDERSDIY 202
+ + + F KK H F + W++PE+L ++ + DI+
Sbjct: 156 AHGKIKAM--ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIF 213
Query: 203 SVG-ISCCELANGTVPFAETPTTLMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYI 261
S G + ++ G+ PF ++ I L GA LDC +
Sbjct: 214 SAGCVFYYVISEGSHPFGKSLQRQANI--LLGACS--LDC-------------------L 250
Query: 262 SEQQTQVLTSRKFSDSFHSIVELCLSRDVDKRPLACNLLQHAFFKQTKK 310
++ + + +R+ ++E ++ D KRP A ++L+H FF +K
Sbjct: 251 HPEKHEDVIARE-------LIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 386 NQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHL-RHPNIICYISSFLDATDLHLV-----S 439
N+ +AVK R+ E E+ +R HPN+I Y + D ++ +
Sbjct: 48 NRDVAVK-----RILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA 102
Query: 440 PLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISH-N 498
L + KD AH GL + + LQ +GL ++H +HR +K +ILIS N
Sbjct: 103 TLQEYVEQKDF--AHL--GLEPITL---LQQTTSGLAHLHSLNIVHRDLKPHNILISMPN 155
Query: 499 GKACLSGLRYMCPFSPTKKKV---HLFPPSTAY--NLNWLSPEVLEQN-LDGYDERSDIY 552
+ + + F KK H F + W++PE+L ++ + DI+
Sbjct: 156 AHGKIKAM--ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIF 213
Query: 553 SVG-ISCCELANGTVPFAET 571
S G + ++ G+ PF ++
Sbjct: 214 SAGCVFYYVISEGSHPFGKS 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TKKKVHLFPPST 176
V G+E++ + IHR + A +IL+S K C GL P +K P
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--- 213
Query: 177 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 214 ---LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNG--KACLSGLRYMCPFSP--TKKKVHLFPPST 526
V G+E++ + IHR + A +IL+S K C GL P +K P
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--- 213
Query: 527 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
L W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 214 ---LKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 33/250 (13%)
Query: 341 FNINDTF---NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVK 392
+N N +F SS+ L VP I I G VY + + + +AVK
Sbjct: 9 YNPNYSFAGKTSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 393 KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN 452
+ +++D E + + H NI+ I L + ++ LM G K +
Sbjct: 68 TLP-EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 126
Query: 453 -----AHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 508 --------YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
Y + K + P + W+ PE + + + ++D +S G+
Sbjct: 187 DFGMARDIYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLW 237
Query: 560 ELAN-GTVPF 568
E+ + G +P+
Sbjct: 238 EIFSLGYMPY 247
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 194 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 244
Query: 216 VPF 218
+P+
Sbjct: 245 MPY 247
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 33/250 (13%)
Query: 341 FNINDTF---NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVK 392
+N N +F SS+ L VP I I G VY + + + +AVK
Sbjct: 9 YNPNYSFAGKTSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 67
Query: 393 KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN 452
+ +++D E + + H NI+ I L + ++ LM G K +
Sbjct: 68 TLP-EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 126
Query: 453 -----AHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 127 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 186
Query: 508 --------YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
Y + K + P + W+ PE + + + ++D +S G+
Sbjct: 187 DFGMAQDIYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLW 237
Query: 560 ELAN-GTVPF 568
E+ + G +P+
Sbjct: 238 EIFSLGYMPY 247
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 74 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQD 193
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 194 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 244
Query: 216 VPF 218
+P+
Sbjct: 245 MPY 247
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 33/250 (13%)
Query: 341 FNINDTF---NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVK 392
+N N +F SS+ L VP I I G VY + + + +AVK
Sbjct: 15 YNPNYSFAGKTSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVK 73
Query: 393 KFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN 452
+ +++D E + + H NI+ I L + ++ LM G K +
Sbjct: 74 TLP-EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 132
Query: 453 -----AHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR 507
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 133 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 192
Query: 508 --------YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCC 559
Y + K + P + W+ PE + + + ++D +S G+
Sbjct: 193 DFGMARDIYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLW 243
Query: 560 ELAN-GTVPF 568
E+ + G +P+
Sbjct: 244 EIFSLGYMPY 253
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 199
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 200 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 250
Query: 216 VPF 218
+P+
Sbjct: 251 MPY 253
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 66
V N+++ +G C N + L K+ TN+ +A+K L+ M LH E +
Sbjct: 28 VGPNFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIK---LEPMKSR-APQLHLEYRFYKQ 81
Query: 67 LRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQD 120
L + I + F +A L L+ P S +DL + F L +++ I
Sbjct: 82 LGSGDGIPQVYYFGPCGKYNAMVLELLGP-----SLEDLFDLCDRTFSLKTVLMIAI--Q 134
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNG 149
+++ +EY+H K I+R VK + LI G
Sbjct: 135 LISRMEYVHSKNLIYRDVKPENFLIGRPG 163
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 416
V N+++ +G C N + L K+ TN+ +A+K L+ M LH E +
Sbjct: 28 VGPNFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIK---LEPMKSR-APQLHLEYRFYKQ 81
Query: 417 LRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQD 470
L + I + F +A L L+ P S +DL + F L +++ I
Sbjct: 82 LGSGDGIPQVYYFGPCGKYNAMVLELLGP-----SLEDLFDLCDRTFSLKTVLMIAI--Q 134
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNG 499
+++ +EY+H K I+R VK + LI G
Sbjct: 135 LISRMEYVHSKNLIYRDVKPENFLIGRPG 163
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 66
V N+++ +G C N + L K+ TN+ +A+K L+ M LH E +
Sbjct: 7 VGPNFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIK---LEPMKSR-APQLHLEYRFYKQ 60
Query: 67 LRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQD 120
L + I + F +A L L+ P S +DL + F L +++ I
Sbjct: 61 LGSGDGIPQVYYFGPCGKYNAMVLELLGP-----SLEDLFDLCDRTFSLKTVLMIAI--Q 113
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNG 149
+++ +EY+H K I+R VK + LI G
Sbjct: 114 LISRMEYVHSKNLIYRDVKPENFLIGRPG 142
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 416
V N+++ +G C N + L K+ TN+ +A+K L+ M LH E +
Sbjct: 7 VGPNFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIK---LEPMKSR-APQLHLEYRFYKQ 60
Query: 417 LRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQD 470
L + I + F +A L L+ P S +DL + F L +++ I
Sbjct: 61 LGSGDGIPQVYYFGPCGKYNAMVLELLGP-----SLEDLFDLCDRTFSLKTVLMIAI--Q 113
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNG 499
+++ +EY+H K I+R VK + LI G
Sbjct: 114 LISRMEYVHSKNLIYRDVKPENFLIGRPG 142
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 66
V N+++ +G C N + L K+ TN+ +A+K L+ M LH E +
Sbjct: 7 VGPNFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIK---LEPMKSR-APQLHLEYRFYKQ 60
Query: 67 LRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQD 120
L + I + F +A L L+ P S +DL + F L +++ I
Sbjct: 61 LGSGDGIPQVYYFGPCGKYNAMVLELLGP-----SLEDLFDLCDRTFSLKTVLMIAI--Q 113
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNG 149
+++ +EY+H K I+R VK + LI G
Sbjct: 114 LISRMEYVHSKNLIYRDVKPENFLIGRPG 142
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 416
V N+++ +G C N + L K+ TN+ +A+K L+ M LH E +
Sbjct: 7 VGPNFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIK---LEPMKSR-APQLHLEYRFYKQ 60
Query: 417 LRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQD 470
L + I + F +A L L+ P S +DL + F L +++ I
Sbjct: 61 LGSGDGIPQVYYFGPCGKYNAMVLELLGP-----SLEDLFDLCDRTFSLKTVLMIAI--Q 113
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNG 499
+++ +EY+H K I+R VK + LI G
Sbjct: 114 LISRMEYVHSKNLIYRDVKPENFLIGRPG 142
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + + K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQGKAFK--NRELQIMRKLDH 72
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 186
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 187 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + + K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQGKAFK--NRELQIMRKLDH 72
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 186
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 187 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + + K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQGKAFK--NRELQIMRKLDH 72
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 180
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 186
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 187 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + + K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQGKAFK--NRELQIMRKLDH 72
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAY--NL 530
L YIH G HR +K ++L+ + + + +C F K+ V P+ +Y +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVR-GEPNVSYICSR 186
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 187 YYRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 30/240 (12%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDE 402
SS+ L VP I I G VY + + + +AVK + +++
Sbjct: 33 TSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVYSEQ 90
Query: 403 DLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNF 457
D E + + H NI+ I L + ++ LM G K +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR--------YM 509
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ + Y
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 510 CPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ K + P + W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 211 ASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 261
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 79/194 (40%), Gaps = 24/194 (12%)
Query: 39 IAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCK 98
+AVK + +++D E + + H NI+ I L + ++ LM G K
Sbjct: 78 VAVKTLP-EVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLK 136
Query: 99 DLIN-----AHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL 153
+ L L + H+ +D+ G +Y+ FIHR + A + L++ G +
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV 196
Query: 154 SGLR--------YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVG 205
+ + Y + K + P + W+ PE + + + ++D +S G
Sbjct: 197 AKIGDFGMARDIYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFG 247
Query: 206 ISCCELAN-GTVPF 218
+ E+ + G +P+
Sbjct: 248 VLLWEIFSLGYMPY 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 30/240 (12%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDE 402
SS+ L VP I I G VY + + + +AVK + +++
Sbjct: 33 TSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQ 90
Query: 403 DLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNF 457
D E + + H NI+ I L + ++ LM G K +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 150
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR--------YM 509
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ + Y
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 510 CPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ K + P + W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 211 ASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 261
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 88 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 147
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 208 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 258
Query: 216 VPF 218
+P+
Sbjct: 259 MPY 261
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 69
+Y ++G + VY +K + +L+A+KK + + K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQGKAFK--NRELQIMRKLDH 72
Query: 70 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 122
NI+ + SS +++L L + + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 123 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 181
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 182 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 229
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 188 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 22/228 (9%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRH 419
+Y ++G + VY +K + +L+A+KK + + K + E+ MR L H
Sbjct: 21 SYTDTKVIGN--GSFGVVYQAKLCDSGELVAIKKV----LQGKAFK--NRELQIMRKLDH 72
Query: 420 PNII----CYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG---LPELVICHILQDVL 472
NI+ + SS +++L L + + H++ LP + + + +
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 473 NGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFP-PSTAYNLN 531
L YIH G HR +K ++L+ + + + +C F K+ V P S +
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPD-----TAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 532 WLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLMLIE 579
+ +PE++ D Y D++S G EL G F L+E
Sbjct: 188 YRAPELIFGATD-YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 30/240 (12%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDE 402
SS+ L VP I I G VY + + + +AVK + +++
Sbjct: 18 TSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQ 75
Query: 403 DLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNF 457
D E + + H NI+ I L + ++ LM G K +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 135
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR--------YM 509
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ + Y
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 510 CPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ K + P + W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 196 ASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 246
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 193 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 243
Query: 216 VPF 218
+P+
Sbjct: 244 MPY 246
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 106/279 (37%), Gaps = 37/279 (13%)
Query: 312 SVMLPELLRPALSLNESNVCEINNELECMFNINDTF---NSSVETLDNVPSNYKICSILG 368
M EL P L++ I + +N N F SS+ L VP I I G
Sbjct: 1 GAMGSELQSPEYKLSKLRTSTIMTD----YNPNYCFAGKTSSISDLKEVPRK-NITLIRG 55
Query: 369 QCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNII 423
VY + + + +AVK + +++D E + + H NI+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 424 CYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQDVLNGLEYI 478
I L + ++ LM G K + L L + H+ +D+ G +Y+
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLR--------YMCPFSPTKKKVHLFPPSTAYNL 530
FIHR + A + L++ G ++ + Y + K + P +
Sbjct: 175 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-RKGGCAMLP------V 227
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 228 KWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 264
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 91 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 150
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 151 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 210
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 211 IYRAGYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 261
Query: 216 VPF 218
+P+
Sbjct: 262 MPY 264
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 106/279 (37%), Gaps = 37/279 (13%)
Query: 312 SVMLPELLRPALSLNESNVCEINNELECMFNINDTF---NSSVETLDNVPSNYKICSILG 368
M EL P L++ I + +N N F SS+ L VP I I G
Sbjct: 24 GAMGSELQSPEYKLSKLRTSTIMTD----YNPNYCFAGKTSSISDLKEVPRK-NITLIRG 78
Query: 369 QCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNII 423
VY + + + +AVK + +++D E + + H NI+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 424 CYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQDVLNGLEYI 478
I L + ++ LM G K + L L + H+ +D+ G +Y+
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 479 HGKGFIHRAVKASHILISHNGKACLSGLR--------YMCPFSPTKKKVHLFPPSTAYNL 530
FIHR + A + L++ G ++ + Y + K + P +
Sbjct: 198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-RKGGCAMLP------V 250
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 251 KWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 287
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 173
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 174 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 234 IYRAGYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 284
Query: 216 VPF 218
+P+
Sbjct: 285 MPY 287
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 52/269 (19%)
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 123
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 177
G+ ++H IHR +K +IL+S + + LR + KK+
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 178 YNLN-------WLSPEVLEQNLDGYDERS-DIYSVG-ISCCELANGTVPFAETPTTLMLI 228
NLN W +PE+LE++ RS DI+S+G + L+ G PF + +
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---- 260
Query: 229 EKLAGATPHLLDCTTYYVDTGQDDGEENACSYI-SEQQTQVLTSRKFSDSFHSIVELCLS 287
E N I S + + L R ++ +
Sbjct: 261 -------------------------ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMID 295
Query: 288 RDVDKRPLACNLLQHA-FFKQTKKCSVML 315
D KRP A +L+H F+ ++KK +L
Sbjct: 296 HDPLKRPTAMKVLRHPLFWPKSKKLEFLL 324
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 473
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 527
G+ ++H IHR +K +IL+S + + LR + KK+
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 528 YNLN-------WLSPEVLEQNLDGYDERS-DIYSVG-ISCCELANGTVPFAE 570
NLN W +PE+LE++ RS DI+S+G + L+ G PF +
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 105/274 (38%), Gaps = 37/274 (13%)
Query: 317 ELLRPALSLNESNVCEINNELECMFNINDTF---NSSVETLDNVPSNYKICSILGQCFNN 373
EL P L++ I + +N N F SS+ L VP I I G
Sbjct: 5 ELQSPEYKLSKLRTSTIMTD----YNPNYCFAGKTSSISDLKEVPRK-NITLIRGLGHGA 59
Query: 374 LSSVYLSK-----HKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYISS 428
VY + + + +AVK + +++D E + + H NI+ I
Sbjct: 60 FGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCIGV 118
Query: 429 FLDATDLHLVSPLMGFGSCKDLIN-----AHFNFGLPELVICHILQDVLNGLEYIHGKGF 483
L + ++ LM G K + L L + H+ +D+ G +Y+ F
Sbjct: 119 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 178
Query: 484 IHRAVKASHILISHNGKACLSGLR--------YMCPFSPTKKKVHLFPPSTAYNLNWLSP 535
IHR + A + L++ G ++ + Y + K + P + W+ P
Sbjct: 179 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-RKGGCAMLP------VKWMPP 231
Query: 536 EVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
E + + + ++D +S G+ E+ + G +P+
Sbjct: 232 EAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 263
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 90 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 209
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 210 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 260
Query: 216 VPF 218
+P+
Sbjct: 261 MPY 263
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 52/269 (19%)
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 123
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 177
G+ ++H IHR +K +IL+S + + LR + KK+
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 178 YNLN-------WLSPEVLEQNLDGYDERS-DIYSVG-ISCCELANGTVPFAETPTTLMLI 228
NLN W +PE+LE++ RS DI+S+G + L+ G PF + +
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---- 260
Query: 229 EKLAGATPHLLDCTTYYVDTGQDDGEENACSYI-SEQQTQVLTSRKFSDSFHSIVELCLS 287
E N I S + + L R ++ +
Sbjct: 261 -------------------------ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMID 295
Query: 288 RDVDKRPLACNLLQHA-FFKQTKKCSVML 315
D KRP A +L+H F+ ++KK +L
Sbjct: 296 HDPLKRPTAMKVLRHPLFWPKSKKLEFLL 324
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 473
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 527
G+ ++H IHR +K +IL+S + + LR + KK+
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 528 YNLN-------WLSPEVLEQNLDGYDERS-DIYSVG-ISCCELANGTVPFAE 570
NLN W +PE+LE++ RS DI+S+G + L+ G PF +
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 30/240 (12%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDE 402
SS+ L VP I I G VY + + + +AVK + +++
Sbjct: 10 TSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQ 67
Query: 403 DLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNF 457
D E + + H NI+ I L + ++ LM G K +
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 127
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR--------YM 509
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ + Y
Sbjct: 128 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 187
Query: 510 CPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ K + P + W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 188 ASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 238
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 65 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 184
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 185 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 235
Query: 216 VPF 218
+P+
Sbjct: 236 MPY 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 93/240 (38%), Gaps = 30/240 (12%)
Query: 348 NSSVETLDNVPSNYKICSILGQCFNNLSSVYLSK-----HKVTNQLIAVKKFNLDRMTDE 402
SS+ L VP I I G VY + + + +AVK + +++
Sbjct: 18 TSSISDLKEVPRK-NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQ 75
Query: 403 DLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AHFNF 457
D E + + H NI+ I L + ++ LM G K +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 135
Query: 458 GLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR--------YM 509
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ + Y
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
Query: 510 CPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
+ K + P + W+ PE + + + ++D +S G+ E+ + G +P+
Sbjct: 196 ASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPY 246
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 23/183 (12%)
Query: 50 TDEDLKSLHHEIVCMRHLRHPNIICYISSFLDATDLHLVSPLMGFGSCKDLIN-----AH 104
+++D E + + H NI+ I L + ++ LM G K +
Sbjct: 73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 105 FNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLR------- 157
L L + H+ +D+ G +Y+ FIHR + A + L++ G ++ +
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 158 -YMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GT 215
Y + K + P + W+ PE + + + ++D +S G+ E+ + G
Sbjct: 193 IYRASYY-RKGGCAMLP------VKWMPPEAFMEGI--FTSKTDTWSFGVLLWEIFSLGY 243
Query: 216 VPF 218
+P+
Sbjct: 244 MPY 246
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRM------------------- 49
+ Y + LG + + S+V+L+K V N +A+K D++
Sbjct: 19 ARYILVRKLG--WGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 50 -TDEDLKSLHHEIVCMRHLRH--PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN 106
T ED +H + + H H PN + + F + +L++ LI + +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF-EVLGENLLA----------LIKKYEH 125
Query: 107 FGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILIS 146
G+P + + I + +L GL+Y+H + G IH +K ++L+
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRM------------------- 399
+ Y + LG + + S+V+L+K V N +A+K D++
Sbjct: 19 ARYILVRKLG--WGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 400 -TDEDLKSLHHEIVCMRHLRH--PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN 456
T ED +H + + H H PN + + F + +L++ LI + +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF-EVLGENLLA----------LIKKYEH 125
Query: 457 FGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILIS 496
G+P + + I + +L GL+Y+H + G IH +K ++L+
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 106/273 (38%), Gaps = 56/273 (20%)
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 123
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 177
G+ ++H IHR +K +IL+S + + LR + KK+ S
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 178 YNLN-------WLSPEVLEQNLDGYDERS-----DIYSVG-ISCCELANGTVPFAETPTT 224
NLN W +PE+LE++ + +R DI+S+G + L+ G PF + +
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 225 LMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYI-SEQQTQVLTSRKFSDSFHSIVE 283
E N I S + + L R ++
Sbjct: 247 -----------------------------ESNIIRGIFSLDEMKCLHDRSLIAEATDLIS 277
Query: 284 LCLSRDVDKRPLACNLLQHA-FFKQTKKCSVML 315
+ D KRP A +L+H F+ ++KK +L
Sbjct: 278 QMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLL 310
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 473
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 527
G+ ++H IHR +K +IL+S + + LR + KK+ S
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 528 YNLN-------WLSPEVLEQNLDGYDERS-----DIYSVG-ISCCELANGTVPFAE 570
NLN W +PE+LE++ + +R DI+S+G + L+ G PF +
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRM------------------- 49
+ Y + LG + + S+V+L+K V N +A+K D++
Sbjct: 19 ARYILVRKLG--WGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 50 -TDEDLKSLHHEIVCMRHLRH--PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN 106
T ED +H + + H H PN + + F + +L++ LI + +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF-EVLGENLLA----------LIKKYEH 125
Query: 107 FGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILIS 146
G+P + + I + +L GL+Y+H + G IH +K ++L+
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 36/161 (22%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRM------------------- 399
+ Y + LG + + S+V+L+K V N +A+K D++
Sbjct: 19 ARYILVRKLG--WGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD 76
Query: 400 -TDEDLKSLHHEIVCMRHLRH--PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFN 456
T ED +H + + H H PN + + F + +L++ LI + +
Sbjct: 77 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVF-EVLGENLLA----------LIKKYEH 125
Query: 457 FGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILIS 496
G+P + + I + +L GL+Y+H + G IH +K ++L+
Sbjct: 126 RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 6 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH----HEI 61
V + +++ +G + +YL + TN+ +A+K E++K+ H +E
Sbjct: 4 RVGNKFRLGRKIGS--GSFGEIYLGTNIQTNEEVAIKL--------ENVKTKHPQLLYES 53
Query: 62 VCMRHLRHPNIICYISSFLDATDLH-LVSPLMGFGSCKDLINAHFNFGLPELVICHIL-- 118
R L+ I + F D + LV L+G S +DL FNF +L + +L
Sbjct: 54 KIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG-PSLEDL----FNFCSRKLSLKTVLML 108
Query: 119 -QDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 151
++N +E++H K F+HR +K + L+ +A
Sbjct: 109 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 356 NVPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLH----HEI 411
V + +++ +G + +YL + TN+ +A+K E++K+ H +E
Sbjct: 4 RVGNKFRLGRKIGS--GSFGEIYLGTNIQTNEEVAIKL--------ENVKTKHPQLLYES 53
Query: 412 VCMRHLRHPNIICYISSFLDATDLH-LVSPLMGFGSCKDLINAHFNFGLPELVICHIL-- 468
R L+ I + F D + LV L+G S +DL FNF +L + +L
Sbjct: 54 KIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLG-PSLEDL----FNFCSRKLSLKTVLML 108
Query: 469 -QDVLNGLEYIHGKGFIHRAVKASHILISHNGKA 501
++N +E++H K F+HR +K + L+ +A
Sbjct: 109 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYI 76
G+ + + K +V +A+K T++ E M H NII
Sbjct: 57 FGEVYKGMLKTSSGKKEVP---VAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLE 112
Query: 77 SSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIH 135
+ +++ M G+ K L F + +LV +L+ + G++Y+ ++H
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV--GMLRGIAAGMKYLANMNYVH 170
Query: 136 RAVKASHILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLD 193
R + A +IL++ N K GL + P + + W +PE + +
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EATYTTSGGKIPIRWTAPEAI--SYR 225
Query: 194 GYDERSDIYSVGISCCELAN-GTVPFAE 220
+ SD++S GI E+ G P+ E
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWE 253
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYI 426
G+ + + K +V +A+K T++ E M H NII
Sbjct: 57 FGEVYKGMLKTSSGKKEVP---VAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLE 112
Query: 427 SSFLDATDLHLVSPLMGFGSC-KDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIH 485
+ +++ M G+ K L F + +LV +L+ + G++Y+ ++H
Sbjct: 113 GVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV--GMLRGIAAGMKYLANMNYVH 170
Query: 486 RAVKASHILISHNG--KACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLD 543
R + A +IL++ N K GL + P + + W +PE + +
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EATYTTSGGKIPIRWTAPEAI--SYR 225
Query: 544 GYDERSDIYSVGISCCELAN-GTVPFAE 570
+ SD++S GI E+ G P+ E
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWE 253
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 36/249 (14%)
Query: 9 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 68
+Y++ LG+ S V+ + + N+ + VK + + EI + +LR
Sbjct: 37 DDYQLVRKLGR--GKYSEVFEAINITNNEKVVVKILKPVKKN-----KIKREIKILENLR 89
Query: 69 H-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 127
PNII D +P + F + L + I + ++L L+Y
Sbjct: 90 GGPNIITLADIVKDPVSR---TPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 128 IHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 184
H G +HR VK +++I H + GL + P YN+ S
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL------------AEFYHPGQEYNVRVAS 194
Query: 185 -----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATP 236
PE+L + YD D++S+G + PF + L+ I K+ G T
Sbjct: 195 RYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG-TE 252
Query: 237 HLLDCTTYY 245
L D Y
Sbjct: 253 DLYDYIDKY 261
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 93/249 (37%), Gaps = 36/249 (14%)
Query: 359 SNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLR 418
+Y++ LG+ S V+ + + N+ + VK + + EI + +LR
Sbjct: 37 DDYQLVRKLGR--GKYSEVFEAINITNNEKVVVKILKPVKKN-----KIKREIKILENLR 89
Query: 419 H-PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEY 477
PNII D +P + F + L + I + ++L L+Y
Sbjct: 90 GGPNIITLADIVKDPVSR---TPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDY 146
Query: 478 IHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS 534
H G +HR VK +++I H + GL + P YN+ S
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL------------AEFYHPGQEYNVRVAS 194
Query: 535 -----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATP 586
PE+L + YD D++S+G + PF + L+ I K+ G T
Sbjct: 195 RYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG-TE 252
Query: 587 HLLDCTTYY 595
L D Y
Sbjct: 253 DLYDYIDKY 261
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 42/230 (18%)
Query: 17 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYI 76
L +C+N LS K L+AVK L T K E + +L+H +I+ +
Sbjct: 33 LAECYN------LSPTK-DKMLVAVKA--LKDPTLAARKDFQREAELLTNLQHEHIVKFY 83
Query: 77 SSFLDATDLHLVSPLMGFGSCKDLINAHF----------------NFGLPELVICHILQD 120
D L +V M G + AH GL +++ HI
Sbjct: 84 GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML--HIASQ 141
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHN-----GKACLSGLRYMCPFSPTKKKVHLFPPS 175
+ +G+ Y+ + F+HR + + L+ N G +S Y + +
Sbjct: 142 IASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------YRVGGH 194
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL-ANGTVPFAETPTT 224
T + W+ PE + + SD++S G+ E+ G P+ + T
Sbjct: 195 TMLPIRWMPPESIMYR--KFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 42/230 (18%)
Query: 367 LGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRHLRHPNIICYI 426
L +C+N LS K L+AVK L T K E + +L+H +I+ +
Sbjct: 33 LAECYN------LSPTK-DKMLVAVKA--LKDPTLAARKDFQREAELLTNLQHEHIVKFY 83
Query: 427 SSFLDATDLHLVSPLMGFGSCKDLINAHF----------------NFGLPELVICHILQD 470
D L +V M G + AH GL +++ HI
Sbjct: 84 GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQML--HIASQ 141
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHN-----GKACLSGLRYMCPFSPTKKKVHLFPPS 525
+ +G+ Y+ + F+HR + + L+ N G +S Y + +
Sbjct: 142 IASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------YRVGGH 194
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCEL-ANGTVPFAETPTT 574
T + W+ PE + + SD++S G+ E+ G P+ + T
Sbjct: 195 TMLPIRWMPPESIMYR--KFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 125
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 126 EYIHGKGFIHRAVKASHILIS 146
YIH +H +K S+I IS
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 475
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 476 EYIHGKGFIHRAVKASHILIS 496
YIH +H +K S+I IS
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 125
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 126 EYIHGKGFIHRAVKASHILIS 146
YIH +H +K S+I IS
Sbjct: 125 RYIHSMSLVHMDIKPSNIFIS 145
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 475
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 476 EYIHGKGFIHRAVKASHILIS 496
YIH +H +K S+I IS
Sbjct: 125 RYIHSMSLVHMDIKPSNIFIS 145
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 125
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 126 EYIHGKGFIHRAVKASHILIS 146
YIH +H +K S+I IS
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 475
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 476 EYIHGKGFIHRAVKASHILIS 496
YIH +H +K S+I IS
Sbjct: 127 RYIHSMSLVHMDIKPSNIFIS 147
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 68 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 125
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 126 EYIHGKGFIHRAVKASHILIS 146
YIH +H +K S+I IS
Sbjct: 129 RYIHSMSLVHMDIKPSNIFIS 149
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 418 RHPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFG--LPELVICHILQDVLNGL 475
+H +++ Y S++ + + + + GS D I+ ++ E + +L V GL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 476 EYIHGKGFIHRAVKASHILIS 496
YIH +H +K S+I IS
Sbjct: 129 RYIHSMSLVHMDIKPSNIFIS 149
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGL-RYMCPFSPTKKKVHLFPPST 176
V G+ ++ K IHR + A +IL++H K C GL R++ ++ +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHI-----KNDSNYVVKGNA 230
Query: 177 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 231 RLPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGL-RYMCPFSPTKKKVHLFPPST 526
V G+ ++ K IHR + A +IL++H K C GL R++ ++ +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHI-----KNDSNYVVKGNA 230
Query: 527 AYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 231 RLPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 180
V G+E++ + IHR + A +IL+S K + + K ++ L
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSE--KNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 181 NWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 218
W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 211 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 247
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNL 530
V G+E++ + IHR + A +IL+S K + + K ++ L
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSE--KNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 531 NWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPF 568
W++PE + + Y +SD++S G+ E+ + G P+
Sbjct: 211 KWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 105/273 (38%), Gaps = 56/273 (20%)
Query: 69 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 123
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 177
G+ ++H IHR +K +IL+S + + LR + KK+
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 178 YNLN-------WLSPEVLEQNLDGYDERS-----DIYSVG-ISCCELANGTVPFAETPTT 224
NLN W +PE+LE++ + +R DI+S+G + L+ G PF + +
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 225 LMLIEKLAGATPHLLDCTTYYVDTGQDDGEENACSYI-SEQQTQVLTSRKFSDSFHSIVE 283
E N I S + + L R ++
Sbjct: 247 -----------------------------ESNIIRGIFSLDEMKCLHDRSLIAEATDLIS 277
Query: 284 LCLSRDVDKRPLACNLLQHA-FFKQTKKCSVML 315
+ D KRP A +L+H F+ ++KK +L
Sbjct: 278 QMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLL 310
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 419 HPNIICYISSFLDATDLHLVSPLMGFGSCKDLINAH----FNFGL-PELVICHILQDVLN 473
HPN+I Y S L++ L + +DL+ + N L E +L+ + +
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGK------ACLSGLRYMCPFSPTKKKVHLFPPSTA 527
G+ ++H IHR +K +IL+S + + LR + KK+
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 528 YNLN-------WLSPEVLEQNLDGYDERS-----DIYSVG-ISCCELANGTVPFAE 570
NLN W +PE+LE++ + +R DI+S+G + L+ G PF +
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAY 178
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 170 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARL 225
Query: 179 NLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 226 PVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 269
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAY 528
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 170 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARL 225
Query: 529 NLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 226 PVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 269
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 121 VLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAY 178
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 154 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARL 209
Query: 179 NLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 210 PVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 253
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 471 VLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTAY 528
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 154 VAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARL 209
Query: 529 NLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 210 PVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 253
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK ++LI H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK ++LI H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILI 145
+V ++G K +I +++ GLP + I++ VL GL+Y+H K IH +K +IL+
Sbjct: 116 MVFEVLGHHLLKWIIKSNYQ-GLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
Query: 146 SHNGKACLSG--LRYMCPFSPTKKKVHLFPPSTA 177
C+ +R M + +K PPS +
Sbjct: 175 ------CVDDAYVRRMAAEATEWQKAGAPPPSGS 202
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGK-GFIHRAVKASHILI 495
+V ++G K +I +++ GLP + I++ VL GL+Y+H K IH +K +IL+
Sbjct: 116 MVFEVLGHHLLKWIIKSNYQ-GLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
Query: 496 SHNGKACLSG--LRYMCPFSPTKKKVHLFPPSTA 527
C+ +R M + +K PPS +
Sbjct: 175 ------CVDDAYVRRMAAEATEWQKAGAPPPSGS 202
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTA 177
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNAR 226
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 227 LPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 271
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTA 527
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNAR 226
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 227 LPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 271
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 31/203 (15%)
Query: 36 NQLIAVKKFNLDRMTD-EDLKSLHHEIVCMRHLRHPNIICY--------------ISSFL 80
++ +A+KK L TD + +K EI +R L H NI+ + S
Sbjct: 36 DKRVAIKKIVL---TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92
Query: 81 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 140
+ +++V M DL N L E + +L GL+YIH +HR +K
Sbjct: 93 ELNSVYIVQEYME----TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKP 148
Query: 141 SHILISHNGKACLSG----LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYD 196
+++ I+ G R M P K HL S W L + + Y
Sbjct: 149 ANLFINTEDLVLKIGDFGLARIMDPH--YSHKGHL---SEGLVTKWYRSPRLLLSPNNYT 203
Query: 197 ERSDIYSVGISCCELANGTVPFA 219
+ D+++ G E+ G FA
Sbjct: 204 KAIDMWAAGCIFAEMLTGKTLFA 226
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 31/203 (15%)
Query: 386 NQLIAVKKFNLDRMTD-EDLKSLHHEIVCMRHLRHPNIICY--------------ISSFL 430
++ +A+KK L TD + +K EI +R L H NI+ + S
Sbjct: 36 DKRVAIKKIVL---TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92
Query: 431 DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKA 490
+ +++V M DL N L E + +L GL+YIH +HR +K
Sbjct: 93 ELNSVYIVQEYME----TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKP 148
Query: 491 SHILISHNGKACLSG----LRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYD 546
+++ I+ G R M P K HL S W L + + Y
Sbjct: 149 ANLFINTEDLVLKIGDFGLARIMDPH--YSHKGHL---SEGLVTKWYRSPRLLLSPNNYT 203
Query: 547 ERSDIYSVGISCCELANGTVPFA 569
+ D+++ G E+ G FA
Sbjct: 204 KAIDMWAAGCIFAEMLTGKTLFA 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTA 177
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNAR 231
Query: 178 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 223
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 232 LPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHN--GKACLSGLRYMCPFSPTKKKVHLFPPSTA 527
V G+ ++ K IHR + A +IL++H K C GL ++ +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNAR 231
Query: 528 YNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELAN-GTVPFAETPT 573
+ W++PE + + Y SD++S GI EL + G+ P+ P
Sbjct: 232 LPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 28/187 (14%)
Query: 70 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 129
PNII D +P + F + L + I + ++L L+Y H
Sbjct: 92 PNIITLADIVKDPVSR---TPALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCH 148
Query: 130 GKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS-- 184
G +HR VK +++I H + GL + P YN+ S
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL------------AEFYHPGQEYNVRVASRY 196
Query: 185 ---PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHL 238
PE+L + YD D++S+G + PF + L+ I K+ G T L
Sbjct: 197 FKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG-TEDL 254
Query: 239 LDCTTYY 245
D Y
Sbjct: 255 YDYIDKY 261
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 28/187 (14%)
Query: 420 PNIICYISSFLDATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIH 479
PNII D +P + F + L + I + ++L L+Y H
Sbjct: 92 PNIITLADIVKDPVSR---TPALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCH 148
Query: 480 GKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPTKKKVHLFPPSTAYNLNWLS-- 534
G +HR VK +++I H + GL + P YN+ S
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGL------------AEFYHPGQEYNVRVASRY 196
Query: 535 ---PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF---AETPTTLMLIEKLAGATPHL 588
PE+L + YD D++S+G + PF + L+ I K+ G T L
Sbjct: 197 FKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG-TEDL 254
Query: 589 LDCTTYY 595
D Y
Sbjct: 255 YDYIDKY 261
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 177
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 178 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 234 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 260
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 177
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 178 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 234 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 260
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 27/150 (18%)
Query: 10 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS----LHHEIVCMR 65
N+++ +G C N + L K+ TN+ +A+K E +KS LH E +
Sbjct: 5 NFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIKL--------EPIKSRAPQLHLEYRFYK 54
Query: 66 HLRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQ 119
L + + F +A L L+ P S +DL + F L +++ I
Sbjct: 55 QLSATEGVPQVYYFGPXGKYNAMVLELLGP-----SLEDLFDLCDRTFTLKTVLMIAI-- 107
Query: 120 DVLNGLEYIHGKGFIHRAVKASHILISHNG 149
++ +EY+H K I+R VK + L+ G
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPG 137
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 27/150 (18%)
Query: 360 NYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS----LHHEIVCMR 415
N+++ +G C N + L K+ TN+ +A+K E +KS LH E +
Sbjct: 5 NFRVGKKIG-C-GNFGELRLGKNLYTNEYVAIKL--------EPIKSRAPQLHLEYRFYK 54
Query: 416 HLRHPNIICYISSF-----LDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQ 469
L + + F +A L L+ P S +DL + F L +++ I
Sbjct: 55 QLSATEGVPQVYYFGPXGKYNAMVLELLGP-----SLEDLFDLCDRTFTLKTVLMIAI-- 107
Query: 470 DVLNGLEYIHGKGFIHRAVKASHILISHNG 499
++ +EY+H K I+R VK + L+ G
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPG 137
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 126 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 176
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 177 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 233 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 259
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 126 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 176
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 177 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 233 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 259
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 177
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 178 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 234 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 260
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 177
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 178 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 234 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 260
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 178
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 179 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 235 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 261
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 109 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 165
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 133 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 183
Query: 166 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 218
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 184 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 239
Query: 219 -AETPTTLMLIEKLAGATPHLLDCTTYY 245
+ L+ I K+ G T L D Y
Sbjct: 240 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 266
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 25/148 (16%)
Query: 459 LPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACL---SGLRYMCPFSPT 515
L + I + ++L L+Y H G +HR VK +++I H + GL
Sbjct: 133 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL--------- 183
Query: 516 KKKVHLFPPSTAYNLNWLS-----PEVLEQNLDGYDERSDIYSVGISCCELANGTVPF-- 568
+ P YN+ S PE+L + YD D++S+G + PF
Sbjct: 184 ---AEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 239
Query: 569 -AETPTTLMLIEKLAGATPHLLDCTTYY 595
+ L+ I K+ G T L D Y
Sbjct: 240 GHDNYDQLVRIAKVLG-TEDLYDYIDKY 266
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP- 177
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 178 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP- 177
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 178 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 87 LVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 145
+V L+G S +DL N F L +++ + +++ +EYIH K FIHR VK + L+
Sbjct: 82 MVMELLG-PSLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRDVKPDNFLM 138
Query: 146 SHNGKACLSGLRYMCPFSPTKK 167
K L Y+ F KK
Sbjct: 139 GLGKKGNLV---YIIDFGLAKK 157
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 437 LVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 495
+V L+G S +DL N F L +++ + +++ +EYIH K FIHR VK + L+
Sbjct: 82 MVMELLG-PSLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRDVKPDNFLM 138
Query: 496 SHNGKACLSGLRYMCPFSPTKK 517
K L Y+ F KK
Sbjct: 139 GLGKKGNLV---YIIDFGLAKK 157
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 126 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 184
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 185 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 224
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 126 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 184
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 185 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 125 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 183
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 184 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 223
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 125 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 183
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 184 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 179
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 180 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 179
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 180 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 87 LVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 145
+V L+G S +DL N F L +++ + +++ +EYIH K FIHR VK + L+
Sbjct: 80 MVMELLG-PSLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRDVKPDNFLM 136
Query: 146 SHNGKACLSGLRYMCPFSPTKK 167
K L Y+ F KK
Sbjct: 137 GLGKKGNLV---YIIDFGLAKK 155
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 437 LVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 495
+V L+G S +DL N F L +++ + +++ +EYIH K FIHR VK + L+
Sbjct: 80 MVMELLG-PSLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRDVKPDNFLM 136
Query: 496 SHNGKACLSGLRYMCPFSPTKK 517
K L Y+ F KK
Sbjct: 137 GLGKKGNLV---YIIDFGLAKK 155
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 120 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 178
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 179 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 218
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 120 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 178
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 179 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 177
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 178 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 177
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 178 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 87 LVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 145
+V L+G S +DL N F L +++ + +++ +EYIH K FIHR VK + L+
Sbjct: 82 MVMELLG-PSLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRDVKPDNFLM 138
Query: 146 SHNGKACLSGLRYMCPFSPTKK 167
K L Y+ F KK
Sbjct: 139 GLGKKGNLV---YIIDFGLAKK 157
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 437 LVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI 495
+V L+G S +DL N F L +++ + +++ +EYIH K FIHR VK + L+
Sbjct: 82 MVMELLG-PSLEDLFNFCSRKFSLKTVLL--LADQMISRIEYIHSKNFIHRDVKPDNFLM 138
Query: 496 SHNGKACLSGLRYMCPFSPTKK 517
K L Y+ F KK
Sbjct: 139 GLGKKGNLV---YIIDFGLAKK 157
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 185
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 186 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 225
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 185
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 186 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 223
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 224 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 263
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 223
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 224 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 179
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 180 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 179
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 180 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 7 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 66
V Y++ LG+ + V+ S + T +++AVKK D + EI+ +
Sbjct: 7 VLRKYELVKKLGKGAYGI--VWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE 64
Query: 67 LR-HPNIICYISSFL--DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 123
L H NI+ ++ + D++LV M +I A+ L + +++ ++
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRANI---LEPVHKQYVVYQLIK 120
Query: 124 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN---- 179
++Y+H G +HR +K S+IL++ ++ F ++ + P S N
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 180 ------------LNWL-SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 226
W +PE+L + Y + D++S+G E+ G P +T+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGST-KYTKGIDMWSLGCILGEILCGK-PIFPGSSTMN 238
Query: 227 LIEKLAGA 234
+E++ G
Sbjct: 239 QLERIIGV 246
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 357 VPSNYKICSILGQCFNNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKSLHHEIVCMRH 416
V Y++ LG+ + V+ S + T +++AVKK D + EI+ +
Sbjct: 7 VLRKYELVKKLGKGAYGI--VWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE 64
Query: 417 LR-HPNIICYISSFL--DATDLHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLN 473
L H NI+ ++ + D++LV M +I A+ L + +++ ++
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRANI---LEPVHKQYVVYQLIK 120
Query: 474 GLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYN---- 529
++Y+H G +HR +K S+IL++ ++ F ++ + P S N
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 530 ------------LNWL-SPEVLEQNLDGYDERSDIYSVGISCCELANGTVPFAETPTTLM 576
W +PE+L + Y + D++S+G E+ G P +T+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGST-KYTKGIDMWSLGCILGEILCGK-PIFPGSSTMN 238
Query: 577 LIEKLAGA 584
+E++ G
Sbjct: 239 QLERIIGV 246
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 171 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 229
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 230 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 269
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 171 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 229
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 230 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 116 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 175
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 193
Query: 176 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 218
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 194 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 233
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 466 HILQDVLNGLEYIHGKGFIHRAVKASHILISHNGKACLSGLRYMCPFSPTKKKVHLFPPS 525
I++ + ++Y+H HR VK ++L + + L T L P
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP- 193
Query: 526 TAYNLNWLSPEVLEQNLDGYDERSDIYSVGISCCELANGTVPF 568
Y +++PEVL + YD+ D++S+G+ L G PF
Sbjct: 194 -CYTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 87 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI- 145
LV P +G S + ++ L E + + +L+ LE++H ++H V A +I +
Sbjct: 135 LVLPSLG-RSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD 193
Query: 146 -SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP-----EVLEQNLD---GYD 196
+ L+G + + P+ K V AY SP E + +L G
Sbjct: 194 PEDQSQVTLAGYGFAFRYCPSGKHV-------AYVEGSRSPHEGDLEFISMDLHKGCGPS 246
Query: 197 ERSDIYSVGISCCELANGTVPF 218
RSD+ S+G + G +P+
Sbjct: 247 RRSDLQSLGYCMLKWLYGFLPW 268
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 437 LVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHILI- 495
LV P +G S + ++ L E + + +L+ LE++H ++H V A +I +
Sbjct: 135 LVLPSLG-RSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD 193
Query: 496 -SHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSP-----EVLEQNLD---GYD 546
+ L+G + + P+ K V AY SP E + +L G
Sbjct: 194 PEDQSQVTLAGYGFAFRYCPSGKHV-------AYVEGSRSPHEGDLEFISMDLHKGCGPS 246
Query: 547 ERSDIYSVGISCCELANGTVPF 568
RSD+ S+G + G +P+
Sbjct: 247 RRSDLQSLGYCMLKWLYGFLPW 268
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 22 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS----LHHEIVCMRHLRH-----PNI 72
N + L K+ TN+ +A+K E +KS LH E + L P +
Sbjct: 11 GNFGELRLGKNLYTNEYVAIKL--------EPIKSRAPQLHLEYRFYKQLGSAGEGLPQV 62
Query: 73 ICY-ISSFLDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHG 130
+ +A L L+ P S +DL + F L +++ I +L+ +EY+H
Sbjct: 63 YYFGPXGKYNAMVLELLGP-----SLEDLFDLCDRTFTLKTVLMIAI--QLLSRMEYVHS 115
Query: 131 KGFIHRAVKASHILISHNG 149
K I+R VK + LI G
Sbjct: 116 KNLIYRDVKPENFLIGRQG 134
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 372 NNLSSVYLSKHKVTNQLIAVKKFNLDRMTDEDLKS----LHHEIVCMRHLRH-----PNI 422
N + L K+ TN+ +A+K E +KS LH E + L P +
Sbjct: 11 GNFGELRLGKNLYTNEYVAIKL--------EPIKSRAPQLHLEYRFYKQLGSAGEGLPQV 62
Query: 423 ICY-ISSFLDATDLHLVSPLMGFGSCKDLINA-HFNFGLPELVICHILQDVLNGLEYIHG 480
+ +A L L+ P S +DL + F L +++ I +L+ +EY+H
Sbjct: 63 YYFGPXGKYNAMVLELLGP-----SLEDLFDLCDRTFTLKTVLMIAI--QLLSRMEYVHS 115
Query: 481 KGFIHRAVKASHILISHNG 499
K I+R VK + LI G
Sbjct: 116 KNLIYRDVKPENFLIGRQG 134
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 4/134 (2%)
Query: 85 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 144
L +V + G I + E I + + ++Y+H HR VK ++L
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 145 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 204
+ + L T L P Y +++PEVL + YD+ D +S+
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTP--CYTPYYVAPEVL--GPEKYDKSCDXWSL 249
Query: 205 GISCCELANGTVPF 218
G+ L G PF
Sbjct: 250 GVIXYILLCGYPPF 263
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 4/134 (2%)
Query: 435 LHLVSPLMGFGSCKDLINAHFNFGLPELVICHILQDVLNGLEYIHGKGFIHRAVKASHIL 494
L +V + G I + E I + + ++Y+H HR VK ++L
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLL 193
Query: 495 ISHNGKACLSGLRYMCPFSPTKKKVHLFPPSTAYNLNWLSPEVLEQNLDGYDERSDIYSV 554
+ + L T L P Y +++PEVL + YD+ D +S+
Sbjct: 194 YTSKRPNAILKLTDFGFAKETTSHNSLTTP--CYTPYYVAPEVL--GPEKYDKSCDXWSL 249
Query: 555 GISCCELANGTVPF 568
G+ L G PF
Sbjct: 250 GVIXYILLCGYPPF 263
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,708,217
Number of Sequences: 62578
Number of extensions: 873147
Number of successful extensions: 5163
Number of sequences better than 100.0: 923
Number of HSP's better than 100.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 312
Number of HSP's that attempted gapping in prelim test: 1898
Number of HSP's gapped (non-prelim): 1909
length of query: 622
length of database: 14,973,337
effective HSP length: 105
effective length of query: 517
effective length of database: 8,402,647
effective search space: 4344168499
effective search space used: 4344168499
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)