BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15044
(154 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 93.6 bits (231), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 15 PRNFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV 74
P NFSW++P LA +A P H + L GV HLVSL+E P + L + +
Sbjct: 5 PPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHS-DSCPGLTLHRLRI 63
Query: 75 EEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAIT 134
++ P Q+ +F++ +GEAVGVHC G GRTG M ACYLV G+ AI
Sbjct: 64 PDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIA 123
Query: 135 TLRLARPGSLECH 147
+R RPGS+E +
Sbjct: 124 EIRRLRPGSIETY 136
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 15 PRNFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV 74
P NFSW++P LA +A P H + L GV HLVSL+E P + L + +
Sbjct: 6 PPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHS-DSCPGLTLHRLRI 64
Query: 75 EEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAIT 134
++ P Q+ +F++ +GEAVGVHC G GRTG ACYLV G+ AI
Sbjct: 65 PDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIA 124
Query: 135 TLRLARPGSLECH 147
+R RPGS+E +
Sbjct: 125 EIRRLRPGSIETY 137
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 5 DPPEAKEKEGPRNFSWIVPDELAAMACPDTRDHLKT-------------LSYRGVCHLVS 51
D E EK + +WI+PD A P +R L++ V ++
Sbjct: 165 DEYEHYEKAENGDLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIR 224
Query: 52 LSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRG 111
L++ + + + PT V +F++ C N A+ VHC++G G
Sbjct: 225 LNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEG---AIAVHCKAGLG 281
Query: 112 RTGVMAACYLVYFLGMTPERAITTLRLARPGSL 144
RTG + ACY++ MT I +R+ RPGS+
Sbjct: 282 RTGTLIACYIMKHYRMTAAETIAWVRICRPGSV 314
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 110 RGRTGVMAACYLVYFLGMTPERAITTL 136
+ + CY+V +LG TPE A L
Sbjct: 91 QANAAFLVGCYMVIYLGRTPEEAYRIL 117
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 16/153 (10%)
Query: 5 DPPEAKEKEGPRNFSWIVPDELAAMACPDTRDHLKT-------------LSYRGVCHLVS 51
D E EK + +WI+PD A P +R L++ V ++
Sbjct: 165 DEYEHYEKAENGDLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIR 224
Query: 52 LSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRG 111
L++ + + + PT V +F++ C N A+ VH ++G G
Sbjct: 225 LNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEG---AIAVHSKAGLG 281
Query: 112 RTGVMAACYLVYFLGMTPERAITTLRLARPGSL 144
RTG + ACY++ MT I +R+ RPGS+
Sbjct: 282 RTGTLIACYIMKHYRMTAAETIAWVRICRPGSV 314
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 110 RGRTGVMAACYLVYFLGMTPERAITTL 136
+ + CY+V +LG TPE A L
Sbjct: 91 QANAAFLVGCYMVIYLGRTPEEAYRIL 117
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPER 131
IP+ + P+ Q + +++ ++ + E VHC G GRTG + A YL+ G+ E
Sbjct: 65 IPIPDGGVPSDSQFLTIMKWLLSEK---EGNLVHCVGGIGRTGTILASYLILTEGLEVES 121
Query: 132 AITTLRLARPGSLECH 147
AI +RL RPG+++ +
Sbjct: 122 AIDEVRLVRPGAVQTY 137
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 49 LVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRS 108
L + S+E G+E+ L V+ PT+ + K ++F + + G+ V VHC++
Sbjct: 44 LCNTSKEWKKAGVEQLR-----LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKA 98
Query: 109 GRGRTGVMAACYLVYFLGMTPERAI 133
GR R+ M A YL+ +PE AI
Sbjct: 99 GRSRSATMVAAYLIQVHNWSPEEAI 123
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPER 131
IP+ + P+ Q + +++ ++ + E VH G GRTG + A YL+ G+ E
Sbjct: 65 IPIPDGGVPSDSQFLTIMKWLLSEK---EGNLVHSVGGIGRTGTILASYLILTEGLEVES 121
Query: 132 AITTLRLARPGSLECH 147
AI +RL RPG+++ +
Sbjct: 122 AIDEVRLVRPGAVQTY 137
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 49 LVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRS 108
L + S+E G+E+ L V+ PT+ + K ++F + + G+ V VH ++
Sbjct: 45 LCNTSKEWKKAGVEQLR-----LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKA 99
Query: 109 GRGRTGVMAACYLVYFLGMTPERAI 133
GR R+ M A YL+ +PE AI
Sbjct: 100 GRSRSATMVAAYLIQVHNWSPEEAI 124
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 33 DTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTM-RQVIKFIEF 91
D RD + LS V H++S+ + P E + ++ IP + + + R + I+F
Sbjct: 21 DARD-AEQLSKNKVTHILSVHDSARP----MLEGVKYLCIPAADSPSQNLTRHFKESIKF 75
Query: 92 CVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLAR 140
CR +GE+ VHC +G R+ + Y++ E A+ T+R R
Sbjct: 76 IHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGR 124
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 90 EFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSLE 145
EF C G VGVHC G RTG M YL++ LG+ P+ AI AR +E
Sbjct: 106 EFTEKC--PGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKARGHKIE 159
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 80 PTMRQVIKFIEFC--VNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLR 137
PT FI C N R E +GVHC G RTG + +LV + + E A+ T
Sbjct: 98 PTTENTETFIRLCERFNERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFA 157
Query: 138 LARP 141
ARP
Sbjct: 158 QARP 161
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 80 PTMRQVIKFIEFC--VNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLR 137
PT FI C N R E +GVHC G RTG + +LV + + E A+ T
Sbjct: 120 PTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFA 179
Query: 138 LARP 141
ARP
Sbjct: 180 QARP 183
>pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase
Domain Of Mouse Mrna Capping Enzyme
Length = 210
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 80 PTMRQVIKFIEFC--VNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLR 137
PT FI C N R E +GVH G RTG + +LV + + E A+ T
Sbjct: 98 PTTENTETFIRLCERFNERSPPELIGVHXTHGFNRTGFLICAFLVEKMDWSIEAAVATFA 157
Query: 138 LARP 141
ARP
Sbjct: 158 QARP 161
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 37 HLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPT---MRQVIKFIEFCV 93
++K L +RGV HLV + + + ++ P ++ PT + +K ++ +
Sbjct: 39 YIKELQHRGVRHLVRVCGPTYDATLVKSRGIDVHSWPFDDGAPPTRAVLDSWLKLLDTEL 98
Query: 94 NCRQKGEAV-----GVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSL---E 145
+Q+ +V GVHC +G GR ++ A LV + ++ AI +R R G++ +
Sbjct: 99 ARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKGAINQTQ 158
Query: 146 CHFCNK 151
H+ K
Sbjct: 159 XHWITK 164
>pdb|1FPZ|A Chain A, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|B Chain B, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|C Chain C, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|D Chain D, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|E Chain E, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FPZ|F Chain F, Crystal Structure Analysis Of Kinase Associated
Phosphatase (Kap) With A Substitution Of The Catalytic
Site Cysteine (Cys140) To A Serine
pdb|1FQ1|A Chain A, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
Length = 212
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 52 LSEECIPDGIERYEPLNWILI--PVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSG 109
LS+ +P+ ++ Y+ I P+ + P + + +E C + +H G
Sbjct: 84 LSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHSYGG 143
Query: 110 RGRTGVMAACYLVYFLG-MTPERAITTLRLAR 140
GR+ ++AAC L+Y ++PE+AI +LR R
Sbjct: 144 LGRSCLVAACLLLYLSDTISPEQAIDSLRDLR 175
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCV--NCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+ +++++ PT+ ++KFI+ + +HC++G+GRTG + + +L+
Sbjct: 85 VMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKAGKGRTGTLVSSWLL 137
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCV--NCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+ +++++ PT+ ++KFI+ + +HC+ G+GRTG + + +L+
Sbjct: 75 VMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLL 127
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCV--NCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+ +++++ PT+ ++KFI+ + +HC+ G+GRTG + + +L+
Sbjct: 85 VMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLL 137
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCV--NCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+ +++++ PT+ ++KFI+ + +HC+ G+GRTG + + +L+
Sbjct: 97 VMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLVSSWLL 149
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 73 PVEEYHAPTMRQVIKFIEFCVNCRQ-----KGEAVGVHCRSGRGRTGVMAACYLVY 123
P E+ H P ++IK FC + Q +HC++G+GRTGVM YL++
Sbjct: 83 PFED-HNPPQLELIK--PFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLH 135
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/113 (19%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 29 MACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVI-K 87
+ C +L L G+ ++++++ +P+ E + IP+ ++ + + Q +
Sbjct: 13 LGCAKDSTNLDVLEEFGIKYILNVTPN-LPNLFENAGEFKYKQIPISDHWSQNLSQFFPE 71
Query: 88 FIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLAR 140
I F R K V VH +G R+ + YL+ L ++ A +++ +
Sbjct: 72 AISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKK 124
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 29 MACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKF 88
+ D ++ + L G+ H+++ S E YE L + VE + +P I F
Sbjct: 11 LGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHF 70
Query: 89 ---IEFCVNC-RQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLR 137
+F Q G + VHC G R+ + YL+ + +T AI ++
Sbjct: 71 QTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVK 123
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 33 DTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEY-HAPTMRQVIKFIEF 91
D +D L L + H++S+ E P + + ++ IPV + P + + I F
Sbjct: 22 DAKD-LDQLGRNKITHIISIHESPQP----LLQDITYLRIPVADTPEVPIKKHFKECINF 76
Query: 92 CVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARP 141
CR G VH +G R+ + Y++ G+ + ++ RP
Sbjct: 77 IHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRP 126
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 95 CRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSLE 145
C G V VHC +G GR V+ A L+ GM E AI +R R G++
Sbjct: 93 CEAPGSCVAVHCVAGLGRAPVLVALALIES-GMKYEDAIQFIRQKRRGAIN 142
>pdb|3V0E|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576(C363s)
Length = 324
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCV--NCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+ +++++ PT+ ++KFI+ + +H + G+GRTG + + +L+
Sbjct: 75 VMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLL 127
>pdb|3V0D|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0D|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0F|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0F|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0G|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|C Chain C, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|D Chain D, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0H|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
pdb|3V0H|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
Length = 339
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCV--NCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+ +++++ PT+ ++KFI+ + +H + G+GRTG + + +L+
Sbjct: 90 VMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLL 142
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 95 CRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSLEC 146
C G V VHC +G GR V+ A L+ GM E AI +R R G++
Sbjct: 96 CEAPGSCVAVHCVAGLGRAPVLVALALIES-GMKYEDAIQFIRQKRRGAINS 146
>pdb|3V0J|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
pdb|3V0J|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
Length = 334
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 12/53 (22%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCV--NCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+ +++++ PT+ ++KFI+ + +H + G+GRTG + + +L+
Sbjct: 90 VMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLL 142
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Query: 67 LNWILIPVEEYHAPTMRQVIKFIE----FCVNCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
+N I IP+ + T + K+ + F C Q+ E V VH +G R+G M YL+
Sbjct: 75 INIIHIPLVD---DTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLM 131
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 67 LNWILIPVEEYHAPTMRQVIKFIE----FCVNCRQKGEAVGVHCRSGRGRTGVMAACYL 121
+N I IP+ + T + K+ + F C Q+ E V VHC +G R+G YL
Sbjct: 92 INIIHIPLVD---DTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYL 147
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 67 LNWILIPVEEYHAPTMRQVIKFIE----FCVNCRQKGEAVGVHCRSGRGRTGVMAACYL 121
+N I IP+ + T + K+ + F C Q+ E V VHC +G R+G YL
Sbjct: 71 INIIHIPLVD---DTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYL 126
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 86 IKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAA 118
++F+ + + R E V VHC +G GRTGV+
Sbjct: 196 LEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVT 228
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 37 HLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVI-KFIEFCVNC 95
+L++L+ G+ ++++++ +P+ E+ ++ IP+ ++ + + + + IEF
Sbjct: 20 NLESLAKLGIRYILNVTPN-LPNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDEA 78
Query: 96 RQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLR 137
+ V VHC +G R+ + YL+ L ++ A ++
Sbjct: 79 LSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVK 120
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 93 VNCRQKGEAVGV--HCRSGRGRTGVMAACYLVYFL---GMTPER-----AITTLRLARPG 142
V C Q+ ++V + HC +G GRTGV+ A + L G+ PE I +R RP
Sbjct: 212 VRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPS 271
Query: 143 SLECH 147
++
Sbjct: 272 LVQTQ 276
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 93 VNCRQKGEAVGV--HCRSGRGRTGVMAACYLVYFL---GMTPER-----AITTLRLARPG 142
V C Q+ ++V + HC +G GRTGV+ A + L G+ PE I +R RP
Sbjct: 212 VRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPS 271
Query: 143 SLECH 147
++
Sbjct: 272 LVQTQ 276
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 93 VNCRQKGEAVGV--HCRSGRGRTGVMAACYLVYFL---GMTPER-----AITTLRLARPG 142
V C Q+ ++V + HC +G GRTGV+ A + L G+ PE I +R RP
Sbjct: 231 VRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPS 290
Query: 143 SLECH 147
++
Sbjct: 291 LVQTQ 295
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 29 MACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKF 88
+ D ++ + L G+ H+++ S E YE L + VE + +P I F
Sbjct: 12 LGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHF 71
Query: 89 ---IEFCVNC-RQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLR 137
+F Q G + VH G R+ + YL+ + +T AI ++
Sbjct: 72 QTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVK 124
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 67 LNWILIPVEEYHAPTM----RQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
L++ IPVE+ H + ++ I FI+ CV R+KG V VH +G R+ + YL+
Sbjct: 50 LHYKWIPVEDSHTADISSHFQEAIDFID-CV--REKGGKVLVHSEAGISRSPTICMAYLM 106
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 104 VHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARP 141
V+C++GR R+ + YL+ G + +RA ++ ARP
Sbjct: 94 VYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARP 131
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFC-VNCR 96
++ L GV +V + E + E ++ + P ++ P+ + V ++ + R
Sbjct: 54 IEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFR 113
Query: 97 QK-GEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSLEC 146
++ G + VHC +G GR V+ A L+ GM E A+ +R R G+
Sbjct: 114 EEPGCCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFNS 163
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 88 FIEFCVNCRQKGEAVG------VHCRSGRGRTGVMAACYLVY----FLGMTPE-RAITTL 136
FI+F + E G VHC +G GRTGV +V + G+ + + TL
Sbjct: 483 FIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTL 542
Query: 137 RLARPGSLEC 146
R RP ++
Sbjct: 543 RTQRPAMVQT 552
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFC-VNCR 96
++ L GV +V + E + E ++ + P ++ P+ + V ++ + R
Sbjct: 54 IEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFR 113
Query: 97 QK-GEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSLE 145
++ G + VHC +G GR V+ A L+ GM E A+ +R R G+
Sbjct: 114 EEPGCCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRGAFN 162
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 88 FIEFCVNCRQK----GEAVGVHCRSGRGRTGVM 116
F++F + R K E V VHC +G GRTGV+
Sbjct: 222 FLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVL 254
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 93 VNCRQKGEAVGV--HCRSGRGRTGVMAACYLVYFL---GMTPER-----AITTLRLARPG 142
V C Q+ ++V + H +G GRTGV+ A + L G+ PE I +R RP
Sbjct: 212 VRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPS 271
Query: 143 SLECH 147
++
Sbjct: 272 LVQTQ 276
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 97 QKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLAR 140
QK V VHCR G R+ + YL+ M + A++ +R R
Sbjct: 114 QKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNR 157
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 97 QKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLAR 140
QK V VHCR G R+ + YL+ M + A++ +R R
Sbjct: 113 QKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNR 156
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 93 VNCRQKGEAVGV--HCRSGRGRTGVMAACYLVYFL---GMTPER-----AITTLRLARPG 142
V C Q+ ++V + H +G GRTGV+ A + L G+ PE I +R RP
Sbjct: 231 VRCYQEDDSVPICIHSSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIREMRTQRPS 290
Query: 143 SLECH 147
++
Sbjct: 291 LVQTQ 295
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFC-VNCR 96
++ L GV +V + E + E ++ + P ++ P+ + V ++ + R
Sbjct: 28 IEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFR 87
Query: 97 QK-GEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSLE 145
++ G + VHC +G GR V+ A L+ G E A+ +R R G+
Sbjct: 88 EEPGCCIAVHCVAGLGRAPVLVALALIEG-GXKYEDAVQFIRQKRRGAFN 136
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFC-VNCR 96
++ L GV +V + E + E ++ + P ++ P+ + V ++ + R
Sbjct: 33 IEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFR 92
Query: 97 QK-GEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPGSLE 145
++ G + VHC +G GR V+ A L+ G E A+ +R R G+
Sbjct: 93 EEPGCCIAVHCVAGLGRAPVLVALALIEG-GXKYEDAVQFIRQKRRGAFN 141
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 67 LNWILIPVEEYHAPTMRQVIKFIEFCVNCRQK-GEAVGVHCRSGRGRTGVMAACYLVYFL 125
N+ +P + + +RQ + + + G+ + +HC++G R+ + YL+
Sbjct: 54 FNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHT 113
Query: 126 GMTPERAITTLRLARP 141
MT A ++ RP
Sbjct: 114 RMTMTDAYKFVKGKRP 129
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 67 LNWILIPVEEYHAPTMRQVIKFIEFCVNCRQK-GEAVGVHCRSGRGRTGVMAACYLVYFL 125
N+ +P + + +RQ + + + G+ + +HC++G R+ + YL+
Sbjct: 50 FNYKRLPATDSNKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHT 109
Query: 126 GMTPERAITTLRLARP 141
MT A ++ RP
Sbjct: 110 RMTMTDAYKFVKGKRP 125
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 79 APTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACY 120
A + +++ I+ CV + VHC +G GRTG + Y
Sbjct: 206 AASFDELLSVIKNCVTT----SPILVHCSAGIGRTGTLIGAY 243
>pdb|3RH2|A Chain A, Crystal Structure Of A Hypothetical Tetr-Like
Transcriptional Regulator (Sama_0099) From Shewanella
Amazonensis Sb2b At 2.42 A Resolution
Length = 212
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 5/30 (16%)
Query: 130 ERAITTLRLA-----RPGSLECHFCNKEEI 154
ER ITT +A PG+L HF NKE+I
Sbjct: 21 ERTITTNHIAAHLDISPGNLYYHFRNKEDI 50
>pdb|2EXJ|A Chain A, Structure Of The Family43 Beta-Xylosidase D128g Mutant
From Geobacillus Stearothermophilus In Complex With
Xylobiose
pdb|2EXJ|B Chain B, Structure Of The Family43 Beta-Xylosidase D128g Mutant
From Geobacillus Stearothermophilus In Complex With
Xylobiose
pdb|2EXJ|C Chain C, Structure Of The Family43 Beta-Xylosidase D128g Mutant
From Geobacillus Stearothermophilus In Complex With
Xylobiose
pdb|2EXJ|D Chain D, Structure Of The Family43 Beta-Xylosidase D128g Mutant
From Geobacillus Stearothermophilus In Complex With
Xylobiose
Length = 535
Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 64 YEPLNWILIPV--EEYHAPTMRQVIKFIEFCVNCRQ--KGEAVGVHCRSGRGRTGVMAAC 119
++ +NWI +PV E Y K + + R G VG+HCR G G+
Sbjct: 478 FDGMNWIDLPVTFESY---------KLSDDYIKSRAAFTGAFVGMHCRDGSGQNNYADFD 528
Query: 120 YLVY 123
Y +Y
Sbjct: 529 YFLY 532
>pdb|2EXI|A Chain A, Structure Of The Family43 Beta-Xylosidase D15g Mutant From
Geobacillus Stearothermophilus
pdb|2EXI|B Chain B, Structure Of The Family43 Beta-Xylosidase D15g Mutant From
Geobacillus Stearothermophilus
pdb|2EXI|C Chain C, Structure Of The Family43 Beta-Xylosidase D15g Mutant From
Geobacillus Stearothermophilus
pdb|2EXI|D Chain D, Structure Of The Family43 Beta-Xylosidase D15g Mutant From
Geobacillus Stearothermophilus
Length = 535
Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 64 YEPLNWILIPV--EEYHAPTMRQVIKFIEFCVNCRQ--KGEAVGVHCRSGRGRTGVMAAC 119
++ +NWI +PV E Y K + + R G VG+HCR G G+
Sbjct: 478 FDGMNWIDLPVTFESY---------KLSDDYIKSRAAFTGAFVGMHCRDGSGQNNYADFD 528
Query: 120 YLVY 123
Y +Y
Sbjct: 529 YFLY 532
>pdb|2EXH|A Chain A, Structure Of The Family43 Beta-Xylosidase From Geobacillus
Stearothermophilus
pdb|2EXH|B Chain B, Structure Of The Family43 Beta-Xylosidase From Geobacillus
Stearothermophilus
pdb|2EXH|C Chain C, Structure Of The Family43 Beta-Xylosidase From Geobacillus
Stearothermophilus
pdb|2EXH|D Chain D, Structure Of The Family43 Beta-Xylosidase From Geobacillus
Stearothermophilus
Length = 535
Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 64 YEPLNWILIPV--EEYHAPTMRQVIKFIEFCVNCRQ--KGEAVGVHCRSGRGRTGVMAAC 119
++ +NWI +PV E Y K + + R G VG+HCR G G+
Sbjct: 478 FDGMNWIDLPVTFESY---------KLSDDYIKSRAAFTGAFVGMHCRDGSGQNNYADFD 528
Query: 120 YLVY 123
Y +Y
Sbjct: 529 YFLY 532
>pdb|2EXK|A Chain A, Structure Of The Family43 Beta-Xylosidase E187g From
Geobacillus Stearothermophilus In Complex With Xylobiose
pdb|2EXK|B Chain B, Structure Of The Family43 Beta-Xylosidase E187g From
Geobacillus Stearothermophilus In Complex With Xylobiose
pdb|2EXK|C Chain C, Structure Of The Family43 Beta-Xylosidase E187g From
Geobacillus Stearothermophilus In Complex With Xylobiose
pdb|2EXK|D Chain D, Structure Of The Family43 Beta-Xylosidase E187g From
Geobacillus Stearothermophilus In Complex With Xylobiose
Length = 535
Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 64 YEPLNWILIPV--EEYHAPTMRQVIKFIEFCVNCRQ--KGEAVGVHCRSGRGRTGVMAAC 119
++ +NWI +PV E Y K + + R G VG+HCR G G+
Sbjct: 478 FDGMNWIDLPVTFESY---------KLSDDYIKSRAAFTGAFVGMHCRDGSGQNNYADFD 528
Query: 120 YLVY 123
Y +Y
Sbjct: 529 YFLY 532
>pdb|1G4U|S Chain S, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp Bound To Rac1
pdb|1G4W|R Chain R, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp
Length = 383
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 104 VHCRSGRGRTGVMAACYLV 122
+HC G GRTG MAA ++
Sbjct: 319 IHCLGGVGRTGTMAAALVL 337
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 59 DGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKG-EAVG---VHCRSGRGRTG 114
D ++ N+ P ++ PT ++F RQK ++ G +HC +G GRTG
Sbjct: 183 DEVQDVMHFNYTAWP--DHGVPTANAAESILQFVQMVRQKSVKSKGPMIIHCSAGVGRTG 240
Query: 115 VMAA 118
A
Sbjct: 241 TFIA 244
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 85 VIKFIEFCVNCR-QKGEAVGVHCRSGRGRTGVMAA 118
++KF++ C Q A+ VHC +G GRTG
Sbjct: 210 MLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVV 244
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 41 LSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEY-HAPTMRQVIKFIEFCVNCRQKG 99
L RG+ +V+ + E IP+ + ++ +P+ + HAP + + +K
Sbjct: 47 LQARGITCIVNATIE-IPN--FNWPQFEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKH 103
Query: 100 EAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARP 141
A VHC +G R+ + YL+ F + A ++ RP
Sbjct: 104 GATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRP 145
>pdb|1XRI|A Chain A, X-ray Structure Of A Putative Phosphoprotein Phosphatase
From Arabidopsis Thaliana Gene At1g05000
pdb|1XRI|B Chain B, X-ray Structure Of A Putative Phosphoprotein Phosphatase
From Arabidopsis Thaliana Gene At1g05000
pdb|2Q47|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of A
Putative Phosphoprotein Phosphatase From Arabidopsis
Thaliana Gene At1g05000
pdb|2Q47|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of A
Putative Phosphoprotein Phosphatase From Arabidopsis
Thaliana Gene At1g05000
Length = 151
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 97 QKGEAVGVHCRSGRGRTGVMAAC 119
+K V +HC+ G+ RTG + C
Sbjct: 90 EKNHPVLIHCKRGKHRTGCLVGC 112
>pdb|3D8H|A Chain A, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
pdb|3D8H|B Chain B, Crystal Structure Of Phosphoglycerate Mutase From
Cryptosporidium Parvum, Cgd7_4270
Length = 267
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 28/94 (29%)
Query: 41 LSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGE 100
L Y+G+C + EC+ D +ER +P E+ AP++ K
Sbjct: 155 LIYKGICPSCLPTTECLKDTVERVKPY------FEDVIAPSI------------MSGKSV 196
Query: 101 AVGVHCRSGRGRTGVMAACYLVYFL-GMTPERAI 133
V H S R L+Y L GMTPE+ +
Sbjct: 197 LVSAHGNSLRA---------LLYLLEGMTPEQIL 221
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 77 YHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
YHA + I+ ++ N G V VHC +G GRTG CY+V
Sbjct: 214 YHATGLLSFIRRVKLS-NPPSAGPIV-VHCSAGAGRTG----CYIV 253
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 26.6 bits (57), Expect = 6.0, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 6 PPEAKEKEGPRNFS----WIVPDELAAMACPDTRDHLKTLSYRGVC----------HLVS 51
P E KE+ G F WI D +A R L + C H
Sbjct: 16 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 52 LSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQ 97
+S +PDG+++ P + L+ +E +R+ + E C ++
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 121
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 26.6 bits (57), Expect = 6.0, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
Query: 6 PPEAKEKEGPRNFS----WIVPDELAAMACPDTRDHLKTLSYRGVC----------HLVS 51
P E KE+ G F WI D +A R L + C H
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 52 LSEECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQ 97
+S +PDG+++ P + L+ +E +R+ + E C ++
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
>pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|B Chain B, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|C Chain C, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2HRE|D Chain D, Structure Of Human Ferrochelatase Variant E343k With
Protoporphyrin Ix Bound
pdb|2QD1|A Chain A, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|B Chain B, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|C Chain C, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
pdb|2QD1|D Chain D, 2.2 Angstrom Structure Of The Human Ferrochelatase Variant
E343k With Substrate Bound
Length = 359
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 34 TRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLN 68
T DH+KTL + + L++EC + I R E LN
Sbjct: 274 TSDHIKTLYELDIEYSQVLAKECGVENIRRAESLN 308
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,962,725
Number of Sequences: 62578
Number of extensions: 189229
Number of successful extensions: 476
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 425
Number of HSP's gapped (non-prelim): 77
length of query: 154
length of database: 14,973,337
effective HSP length: 90
effective length of query: 64
effective length of database: 9,341,317
effective search space: 597844288
effective search space used: 597844288
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.7 bits)