RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15044
(154 letters)
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 146 bits (371), Expect = 3e-46
Identities = 53/131 (40%), Positives = 70/131 (53%), Gaps = 1/131 (0%)
Query: 15 PRNFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV 74
P NFSW++P LA +A P H + L GV HLVSL+E P L + +
Sbjct: 6 PPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSC-PGLTLHRLRI 64
Query: 75 EEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAIT 134
++ P Q+ +F++ +GEAVGVHC G GRTG M ACYLV G+ AI
Sbjct: 65 PDFCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIA 124
Query: 135 TLRLARPGSLE 145
+R RPGS+E
Sbjct: 125 EIRRLRPGSIE 135
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 119 bits (299), Expect = 4e-35
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 19 SWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEEC--------IPDGIERYEP--LN 68
W+ + P T + + GV ++ L E+ + + L
Sbjct: 2 YWVRRKTIGGSGLPYTENEILEWRKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQ 61
Query: 69 WILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMT 128
+ IP+ + P+ Q + +++ ++ + E VHC G GRTG + A YL+ G+
Sbjct: 62 PLHIPIPDGGVPSDSQFLTIMKWLLS---EKEGNLVHCVGGIGRTGTILASYLILTEGLE 118
Query: 129 PERAITTLRLARPGSLE 145
E AI +RL RPG+++
Sbjct: 119 VESAIDEVRLVRPGAVQ 135
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 109 bits (273), Expect = 1e-29
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 16/151 (10%)
Query: 8 EAKEKEGPRNFSWIVPDELAAMACPDTR-------------DHLKTLSYRGVCHLVSLSE 54
E EK + +WI+PD A P +R +++ V ++ L++
Sbjct: 168 EHYEKAENGDLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNK 227
Query: 55 ECIPDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTG 114
+ + + PT V +F++ C A+ VH ++G GRTG
Sbjct: 228 RMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDIC---ENAEGAIAVHSKAGLGRTG 284
Query: 115 VMAACYLVYFLGMTPERAITTLRLARPGSLE 145
+ ACY++ MT I +R+ RPGS+
Sbjct: 285 TLIACYIMKHYRMTAAETIAWVRICRPGSVI 315
Score = 28.4 bits (63), Expect = 0.83
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 104 VHCRSG----RGRTGVMAACYLVYFLGMTPERAITTLRLARP 141
VH + + CY+V +LG TPE A L
Sbjct: 81 VHFTGSDQRKQANAAFLVGCYMVIYLGRTPEEAYRILIFGET 122
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 101 bits (252), Expect = 4e-28
Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 11/137 (8%)
Query: 17 NFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEE 76
F +++ D + P L+ GV HLV + + + ++ P ++
Sbjct: 22 LFHFLILDAPSPSNLPTYIKELQHR---GVRHLVRVCGPTYDATLVKSRGIDVHSWPFDD 78
Query: 77 YHAPTMRQVIKFIEFCVNCRQK--------GEAVGVHCRSGRGRTGVMAACYLVYFLGMT 128
PT + +++ + +GVHC +G GR ++ A LV + ++
Sbjct: 79 GAPPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVALALVEYGNVS 138
Query: 129 PERAITTLRLARPGSLE 145
AI +R R G++
Sbjct: 139 ALDAIALIREKRKGAIN 155
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 94.8 bits (236), Expect = 9e-26
Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Query: 18 FSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEEC----IPDGIERYEP--LNWIL 71
+ I + A P + + V +++++EE + + + ++ + +
Sbjct: 2 YHRIDHT-VLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLR 60
Query: 72 IPVE-EYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPE 130
+ PT+ + K ++F + + G+ V VHC++GR R+ M A YL+ +PE
Sbjct: 61 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPE 120
Query: 131 RAITTLRLARPG 142
AI + R
Sbjct: 121 EAIEAIAKIRSH 132
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 94.0 bits (233), Expect = 7e-25
Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 25/166 (15%)
Query: 5 DPPEAKEKEGPRNFSWIVPD------ELAAMACP---------DTRDHLKTLSYRGVCHL 49
D ++++ P + SW+ L A P + + + L G+ +
Sbjct: 16 DEEPIEDEQTPIHISWLSLSRVNCSQFLGLCALPGCKFKDVRRNVQKDTEELKSCGIQDI 75
Query: 50 VSLSEE------CIPDGIERYEP--LNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEA 101
+P+ ++ Y+ + P+ + P + + +E C +
Sbjct: 76 FVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRK 135
Query: 102 VGVHCRSGRGRTGVMAACYLVYF-LGMTPERAITTLRLAR-PGSLE 145
+H G GR+ ++AAC L+Y ++PE+AI +LR R G+++
Sbjct: 136 TLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQ 181
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 84.3 bits (208), Expect = 1e-21
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 28 AMACP---DTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQ 84
P ++ L GV +V + E + E ++ + P ++ P+ +
Sbjct: 20 ITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQI 79
Query: 85 VIKFIEFC--VNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPG 142
V ++ + G + VHC +G GR V+ A L+ GM E A+ +R R G
Sbjct: 80 VDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRG 138
Query: 143 SLE 145
+
Sbjct: 139 AFN 141
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 83.6 bits (206), Expect = 5e-21
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 28 AMACP---DTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQ 84
P ++ L GV +V + E + E ++ + P ++ P+ +
Sbjct: 41 ITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQI 100
Query: 85 VIKFIEFC--VNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTLRLARPG 142
V ++ + G + VHC +G GR V+ A L+ GM E A+ +R R G
Sbjct: 101 VDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFIRQKRRG 159
Query: 143 SLE 145
+
Sbjct: 160 AFN 162
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 77.7 bits (191), Expect = 6e-19
Identities = 33/143 (23%), Positives = 50/143 (34%), Gaps = 18/143 (12%)
Query: 21 IVPDELAAMACP------------DTRDHLKTLSY--RGVCHLVSLSEECIPDGIERYEP 66
I L P + + + + ++ L+ +
Sbjct: 17 IKDSNLICFKTPLRPELFAYVTSEEDVWTAEQIVKQNPSIGAIIDLTNTSKYYDGVHFLR 76
Query: 67 --LNWILIPVEEYHAPTMRQVIKFIEFCVNCRQK--GEAVGVHCRSGRGRTGVMAACYLV 122
L + I V P V +FI+ +K G VGVHC G RTG M YL+
Sbjct: 77 AGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLM 136
Query: 123 YFLGMTPERAITTLRLARPGSLE 145
+ LG+ P+ AI AR +E
Sbjct: 137 HTLGIAPQEAIDRFEKARGHKIE 159
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 72.5 bits (177), Expect = 4e-16
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 18/136 (13%)
Query: 17 NFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEEC-----------IPDGIERYE 65
N+++I PD L +C T + + L GV + L ++ I ++Y
Sbjct: 12 NYNFIRPD-LIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYS 70
Query: 66 PLNWILIPVEEYHAPTMRQ----VIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYL 121
+ I + ++ A +R V+ + V ++ G VH +G GR +A Y+
Sbjct: 71 DIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAV--KRNGGVTYVHSTAGMGRAPAVALTYM 128
Query: 122 VYFLGMTPERAITTLR 137
+ G A L
Sbjct: 129 FWVQGYKLMEAHKLLM 144
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 69.4 bits (169), Expect = 3e-15
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 79 APTMRQVIKFIEFC--VNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGMTPERAITTL 136
PT FI C N R E +GVHC G RTG + +LV + + E A+ T
Sbjct: 119 CPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATF 178
Query: 137 RLARPGSLE 145
ARP +
Sbjct: 179 AQARPPGIY 187
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 63.4 bits (153), Expect = 9e-13
Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 10 KEKEGPRNFSWIVPDELAAMACPDT------RDHLKTLS------YRGVCHLVSLSEECI 57
+E + ++I P+ + AM P R+++ + ++ + +L E
Sbjct: 11 QEDGFDLDLTYIYPN-IIAMGFPAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERH 69
Query: 58 PDGIERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGE--AVGVHCRSGRGRTGV 115
D ++ P E+++ P + + F E + + +HC++G+GRTGV
Sbjct: 70 YD-TAKFNC-RVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGV 127
Query: 116 MAACYLVY-FLGMTPERAITTLRLARP 141
M YL++ + + A+ R
Sbjct: 128 MICAYLLHRGKFLKAQEALDFYGEVRT 154
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 60.4 bits (146), Expect = 2e-12
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 13/140 (9%)
Query: 5 DPPEAKEKEGPRNFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDG---- 60
+ + +G R P L + P L GV +++L + D
Sbjct: 2 NIESIENLQGIRALQQQAPQ-LLSSGLP-NEQQFSLLKQAGVDVVINLMPDSSKDAHPDE 59
Query: 61 --IERYEPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAA 118
+ ++++ IPV+ + P + V F + KG+ V VHC + R A
Sbjct: 60 GKLVTQAGMDYVYIPVD-WQNPKVEDVEAFFAAM--DQHKGKDVLVHCLANY-RASAFAY 115
Query: 119 CYLVYFLGMTPERAITTLRL 138
Y + G P A T
Sbjct: 116 LYQLK-QGQNPNMAQTMTPW 134
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 55.3 bits (134), Expect = 1e-10
Identities = 21/110 (19%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYH----APTMRQVIKFIEFCV 93
L++L+ G+ ++++++ P+ E+ ++ IP+ ++ + + I+FI+
Sbjct: 24 LESLAKLGIRYILNVTPNL-PNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFID--- 79
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ V VH +G R T +A YL+ L ++ A ++ +
Sbjct: 80 EALSQNCGVLVHSLAGVSRSVTVTVA--YLMQKLHLSLNDAYDLVKRKKS 127
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 56.9 bits (136), Expect = 2e-10
Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 19/140 (13%)
Query: 17 NFSWIVPDELAAMACPDT------RDHLKTLS------YRGVCHLVSLSEECIPDGIERY 64
+F+++ + M+ P R+ + + + + +LS + ++
Sbjct: 23 DFTYVTSR-IIVMSFPLDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRT--AKF 79
Query: 65 EPLNWILIPVEEYHAPTMRQVIKFIEFCVNCRQKGE--AVGVHCRSGRGRTGVMAACYLV 122
AP++ + N + VHC GR + ++ +
Sbjct: 80 HS-RVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFI 138
Query: 123 YFLG-MTPERAITTLRLARP 141
+ TP A+ L RP
Sbjct: 139 FCNLYSTPGPAVRLLYAKRP 158
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 56.6 bits (135), Expect = 2e-10
Identities = 22/144 (15%), Positives = 54/144 (37%), Gaps = 14/144 (9%)
Query: 17 NFSWIVPDELAAMACPDT------RDHLKTLSYRGVCHLVSLSEECIPDGIERYEPL--- 67
+ +++ D + AM+ P + R+ + +S Y+
Sbjct: 26 DLTYV-TDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERGYDETKFD 84
Query: 68 -NWILIPVEEYHAPTMRQVIKFIEFCVN--CRQKGEAVGVHCRSGRGRTGVMAACYLVYF 124
+ + +++++ PT+ ++KFI+ + +H + G+GRTG + + +L+
Sbjct: 85 NHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLVSSWLLED 144
Query: 125 LGM-TPERAITTLRLARPGSLECH 147
T + A+ R
Sbjct: 145 GKFDTAKEALEYFGSRRTDFEVGD 168
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 53.0 bits (128), Expect = 9e-10
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV----EEYHAPTMRQVIKFIEFCV 93
+ L G+ V++S + L +PV E + +E
Sbjct: 30 TELLVRAGITLCVNVSRQQPGPRAPGVAELR---VPVFDDPAEDLLTHLEPTCAAME--- 83
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ G + V+C++GR R A YL+ G + +RA ++ ARP
Sbjct: 84 AAVRDGGSCLVYCKNGRSRSAAVCTA--YLMRHRGHSLDRAFQMVKSARP 131
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 52.2 bits (126), Expect = 2e-09
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV----EEYHAPTMRQVIKFIEFCV 93
L T+ + ++++++ P N+ +P ++ + +FIE
Sbjct: 22 LDTMQRLNIGYVINVTTHL-PLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIE--- 77
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
Q G+ + +HC++G R T V+A YL+ MT A ++ RP
Sbjct: 78 EAHQCGKGLLIHCQAGVSRSATIVIA--YLMKHTRMTMTDAYKFVKGKRP 125
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 52.3 bits (126), Expect = 2e-09
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 15/110 (13%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYH----APTMRQVIKFIEFCV 93
+ LS V H++S+ + P E + ++ IP + ++ IKFI
Sbjct: 25 AEQLSKNKVTHILSVHDSARP----MLEGVKYLCIPAADSPSQNLTRHFKESIKFIH--- 77
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
CR +GE+ VHC +G R T V+A Y++ E A+ T+R R
Sbjct: 78 ECRLRGESCLVHCLAGVSRSVTLVIA--YIMTVTDFGWEDALHTVRAGRS 125
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 52.2 bits (126), Expect = 2e-09
Identities = 16/110 (14%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV----EEYHAPTMRQVIKFIEFCV 93
+ + + ++ + E ++ + L + + ++ IKFI
Sbjct: 28 VDYIHNNNISSILLVGIEVPSLFKDQCDILR---LDIVSEEGHQLYDSIPNAIKFII--- 81
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
Q+ E V + +G + V+A +L+Y+ ++ A ++ P
Sbjct: 82 RSIQRKEGVLIISGTGVNKAPAIVIA--FLMYYQRLSFINAFNKVQGLYP 129
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 52.7 bits (127), Expect = 2e-09
Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYH----APTMRQVIKFIEFCV 93
LS + ++++S E + E + + +PV + + I
Sbjct: 38 KLMLSSNQITMVINVSVEVVNTLYEDIQYMQ---VPVADSPNSRLCDFFDPIADHIH--- 91
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ K +HC +G R +A YL+ + M+ A T + RP
Sbjct: 92 SVEMKQGRTLLHCAAGVSRSAALCLA--YLMKYHAMSLLDAHTWTKSCRP 139
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 52.3 bits (126), Expect = 2e-09
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV----EEYHAPTMRQVIKFIEFCV 93
L T+ + ++++++ P N+ +P ++ + +FIE
Sbjct: 26 LDTMQRLNIGYVINVTTHL-PLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEFIE--- 81
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
Q G+ + +HC++G R T V+A YL+ MT A ++ RP
Sbjct: 82 EAHQCGKGLLIHCQAGVSRSATIVIA--YLMKHTRMTMTDAYKFVKGKRP 129
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 51.4 bits (124), Expect = 3e-09
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQ----VIKFIEFCV 93
L+ L RGV ++++++ E +E N I V + A + KFI
Sbjct: 22 LEDLQNRGVRYILNVTREIDNFFPGVFEYHN---IRVYDEEATDLLAYWNDTYKFIS--- 75
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
++ G VH + G R + V+A Y + G +RA ++ R
Sbjct: 76 KAKKHGSKCLVHSKMGVSRSASTVIA--YAMKEYGWNLDRAYDYVKERRT 123
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 51.5 bits (124), Expect = 3e-09
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEP--LNWILIPVEEYH----APTMRQVIKFIEF 91
+ L G+ H+++ S E YE + ++ + + + + FI
Sbjct: 20 RRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHR 79
Query: 92 CVNCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ Q G + VHC G R T V+A YL+ + +T AI ++ R
Sbjct: 80 AL--SQPGGKILVHCAVGVSRSATLVLA--YLMLYHHLTLVEAIKKVKDHRG 127
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 51.7 bits (123), Expect = 3e-09
Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 12/126 (9%)
Query: 15 PRNFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERY---EPLNWIL 71
P NFS + + PD+ + L G+ ++ L E P+ ++ +
Sbjct: 5 PLNFSMVDNG-IFRSGFPDSA-NFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQ 62
Query: 72 IPVEEYHAPTM----RQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLVYFLGM 127
+E P + ++ ++ ++ +K V +HC+ G+ RTG + C
Sbjct: 63 FGIEGNKEPFVNIPDHKIRMALKVLLD--EKNHPVLIHCKRGKHRTGCLVGCLRK-LQKW 119
Query: 128 TPERAI 133
Sbjct: 120 CLTSIF 125
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 51.0 bits (123), Expect = 4e-09
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVE----EYHAPTMRQVIKFIEFCV 93
L G+ L+++S +C Y+ IPVE + + I++I+
Sbjct: 22 RDMLDALGITALLNVSSDCPNHFEGHYQYKC---IPVEDNHKADISSWFMEAIEYID--- 75
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ V VH ++G R T +A YL+ + E A ++ R
Sbjct: 76 AVKDCRGRVLVHSQAGISRSATICLA--YLMMKKRVRLEEAFEFVKQRRS 123
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 51.5 bits (124), Expect = 4e-09
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 15/110 (13%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVE----EYHAPTMRQVIKFIEFCV 93
L L + H++S+ E P + + ++ IPV ++ I FI
Sbjct: 26 LDQLGRNKITHIISIHESPQP----LLQDITYLRIPVADTPEVPIKKHFKECINFIH--- 78
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
CR G VH +G R T V A Y++ G+ + ++ RP
Sbjct: 79 CCRLNGGNCLVHSFAGISRSTTIVTA--YVMTVTGLGWRDVLEAIKATRP 126
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 52.1 bits (125), Expect = 5e-09
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV----EEYHAPTMRQVIKFIEFCV 93
+ L+ + L+++S + IPV + ++ I FI+
Sbjct: 24 CEFLANLHITALLNVSRRTSEACMTHLHYKW---IPVEDSHTADISSHFQEAIDFID--- 77
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
R+KG V VH +G R T MA YL+ + A ++ R
Sbjct: 78 CVREKGGKVLVHSEAGISRSPTICMA--YLMKTKQFRLKEAFDYIKQRRS 125
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 52.9 bits (126), Expect = 5e-09
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACY-LVYFLGMTPE 130
I ++ P+ + +FI F + HC++G GRT A Y ++ ++
Sbjct: 504 IAATDHIWPSAANIDEFINF-TRTMPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLG 562
Query: 131 RAITTLRLARPGSL 144
++ L +
Sbjct: 563 DILSRQYLLGGNYV 576
Score = 52.5 bits (125), Expect = 6e-09
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACY-LVYFLGMTPE 130
+ ++++ P V KF+EF + K + HC +G GRT + + ++
Sbjct: 206 LTLQDHFRPDDPDVDKFLEFYKSL-PKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSF 264
Query: 131 RAITTLRLARPG 142
I +
Sbjct: 265 DDIIQRQKLIGI 276
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 50.6 bits (122), Expect = 5e-09
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAPTMRQ----VIKFIEFCV 93
L TL V H+++++ + + + I + + + +FIE
Sbjct: 22 LDTLKKNKVTHILNVAYGVENAFLSDFTYKS---ISILDLPETNILSYFPECFEFIE--- 75
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
++K V VH +G R V+ +L+ + A + ++ ARP
Sbjct: 76 EAKRKDGVVLVHSNAGVSRAAAIVIG--FLMNSEQTSFTSAFSLVKNARP 123
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 51.2 bits (123), Expect = 6e-09
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 38 LKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVE----EYHAPTMRQVIKFIEFCV 93
L RG+ +V+ + E ++E + +P+ V I
Sbjct: 44 RHLLQARGITCIVNATIEIPNFNWPQFEYVK---VPLADMPHAPIGLYFDTVADKIH--- 97
Query: 94 NCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ +K A VHC +G R T +A YL+ F + A ++ RP
Sbjct: 98 SVSRKHGATLVHCAAGVSRSATLCIA--YLMKFHNVCLLEAYNWVKARRP 145
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 50.7 bits (122), Expect = 7e-09
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 13/113 (11%)
Query: 37 HLKTLSYRGVCHLVSLSEECIPDGIERYEP--LNWILIPV----EEYHAPTMRQVIKFIE 90
L L G+ H++ + + + I+ ++++ + E +FI+
Sbjct: 25 KLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIADNPVENIIRFFPMTKEFID 84
Query: 91 FCVNCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
Q G V VH +G R V+A Y++ GM A ++ R
Sbjct: 85 ---GSLQMGGKVLVHGNAGISRSAAFVIA--YIMETFGMKYRDAFAYVQERRF 132
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 49.7 bits (118), Expect = 5e-08
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
I ++ PT + +F+ F + + H +G GRT +
Sbjct: 187 IAATDHVWPTPENIDRFLAFYRTL-PQDAWLHFHSEAGVGRTTAFMVMTDM 236
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 47.5 bits (113), Expect = 2e-07
Identities = 17/123 (13%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 21 IVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYHAP 80
++P+++ + P ++ L + V + V+ + + E + + A
Sbjct: 47 VLPEKIYLYSEPTVKELLP---FDVVIN-VAEEANDLRMQVPAVEYHH-YRWEHDSQIAL 101
Query: 81 TMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRL 138
+ + I K E + +H + G R T ++A Y++ + ++ + L+
Sbjct: 102 DLPSLTSIIH---AATTKREKILIHAQCGLSRSATLIIA--YIMKYHNLSLRHSYDLLKS 156
Query: 139 ARP 141
Sbjct: 157 RAD 159
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 47.3 bits (113), Expect = 2e-07
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 84 QVIKFIEFCVNCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ FI+ + QK V VHCR G R T V+A YL+ M + A++ +R R
Sbjct: 102 RAADFIDQAL--AQKNGRVLVHCREGYSRSPTLVIA--YLMMRQKMDVKSALSIVRQNRE 157
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 46.7 bits (111), Expect = 3e-07
Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 14/114 (12%)
Query: 38 LKTLSYRGVCHLVSLSEEC----IPDGIERYEPLNWILIPVE-EYHAPTMR---QVIKFI 89
L G+ H+V+ + R L + I + V ++I
Sbjct: 64 KSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDLSVYFLPVARYI 123
Query: 90 EFCVNCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ V VHC G R T V+A +L+ + MT AI T++ R
Sbjct: 124 RAAL--SVPQGRVLVHCAMGVSRSATLVLA--FLMIYENMTLVEAIQTVQAHRN 173
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 46.2 bits (110), Expect = 3e-07
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 19/114 (16%)
Query: 39 KTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPVEEYH----APTMRQVIKFIEFCVN 94
S ++++L+ + ++ IP+ + + V F+
Sbjct: 50 APSSEVKFKYVLNLTMDKYTLPNSNINIIH---IPLVDDTTTDISKYFDDVTAFLS---K 103
Query: 95 CRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPER-----AITTLRLARP 141
C Q+ E V VH +G R ++A YL+ + ++R R
Sbjct: 104 CDQRNEPVLVHSAAGVNRSGAMILA--YLMSKNKESLPMLYFLYVYHSMRDLRG 155
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 45.5 bits (108), Expect = 1e-06
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 38 LKTLSYRGVCHLVSLSEEC--IPDGIERYEPLN--WILIPVEEYH----APTMRQVIKFI 89
L G H+++ + + G + Y ++ + + ++ + FI
Sbjct: 72 RYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTFDLSVFFYPAAAFI 131
Query: 90 EFCVNCRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMTPERAITTLRLARP 141
+ + + VHC GR R T V+A YL+ MT AI + R
Sbjct: 132 DRAL--SDDHSKILVHCVMGRSRSATLVLA--YLMIHKDMTLVDAIQQVAKNRC 181
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 43.5 bits (103), Expect = 4e-06
Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 19/114 (16%)
Query: 39 KTLSYRGVCHLVSLSEECIPDGIERYEPLNWILIPV----EEYHAPTMRQVIKFIEFCVN 94
S ++++L+ + ++ IP+ + V F+
Sbjct: 67 APSSEVKFKYVLNLTMDKYTLPNSNINIIH---IPLVDDTTTDISKYFDDVTAFLS---K 120
Query: 95 CRQKGEAVGVHCRSGRGR--TGVMAACYLVYFLGMT-----PERAITTLRLARP 141
C Q+ E V VHC +G R ++A YL+ + ++R R
Sbjct: 121 CDQRNEPVLVHCAAGVNRSGAMILA--YLMSKNKESLPMLYFLYVYHSMRDLRG 172
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.7 bits (100), Expect = 1e-05
Identities = 22/116 (18%), Positives = 34/116 (29%), Gaps = 24/116 (20%)
Query: 24 DELAAMACPDT-RDHLKTLSYRGVCHLVSLSEECIPDGIERYEP-----LNWI----LIP 73
+EL + T + L L L E+ L W+ P
Sbjct: 171 EELRDLY--QTYHVLVGDLIKFSAETLSELIRT--TLDAEKVFTQGLNILEWLENPSNTP 226
Query: 74 VEEY--HAPT---MRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTG-----VMAAC 119
++Y P + VI+ + V + G G +G TG V A
Sbjct: 227 DKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVA 282
Score = 33.9 bits (77), Expect = 0.015
Identities = 14/87 (16%), Positives = 24/87 (27%), Gaps = 29/87 (33%)
Query: 14 GPRNFSWIV---PDELAAM-------ACPDTRDHLKTLSYRGVCHLVSLSEECIPDGIER 63
G +N +V P L + P D + + SE R
Sbjct: 373 GAKNL--VVSGPPQSLYGLNLTLRKAKAPSGLDQSR----------IPFSER-KLKFSNR 419
Query: 64 YEPLNWILIPVEEYHAPTMRQVIKFIE 90
+ P + P +H+ + I
Sbjct: 420 FLP---VASP---FHSHLLVPASDLIN 440
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 34.6 bits (80), Expect = 0.008
Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 13/67 (19%)
Query: 88 FIEFCVNCRQKGEAVG------VHCRSGRGRTGVMAACYLVYFLGMTPERAI------TT 135
FI+F + E G VHC +G GRTGV +V M E + T
Sbjct: 483 FIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLER-MRYEGVVDMFQTVKT 541
Query: 136 LRLARPG 142
LR RP
Sbjct: 542 LRTQRPA 548
Score = 28.5 bits (64), Expect = 1.1
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
++ F+ V +A + VHC +G GRTG
Sbjct: 194 ILAFLR-RVKACNPLDAGPMVVHCSAGVGRTGC 225
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 34.6 bits (80), Expect = 0.009
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 12/66 (18%)
Query: 88 FIEFC--VNCRQKGEAVG---VHCRSGRGRTGVMAACYLVYFLGMTPERAI------TTL 136
I+ V +Q+ VHC +G GRTG A + + E + +L
Sbjct: 502 MIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILER-VKAEGLLDVFQAVKSL 560
Query: 137 RLARPG 142
RL RP
Sbjct: 561 RLQRPH 566
Score = 28.5 bits (64), Expect = 0.89
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
++KF++ V A + VHC +G GRTG
Sbjct: 208 MLKFLKK-VKTLNPVHAGPIVVHCSAGVGRTGT 239
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel
beta sheet with flanking helices, structural genomics,
PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5
PDB: 2oz5_A*
Length = 296
Score = 34.2 bits (77), Expect = 0.012
Identities = 22/132 (16%), Positives = 38/132 (28%), Gaps = 3/132 (2%)
Query: 1 MEVRDPPEAKEKEGPRNFSWIVPDELAAMACPDTRDHLKTLSYRGVCHLVSLSEECIPDG 60
++R E + R I L D L++ G
Sbjct: 73 ADLRSSREVARRGPGRVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGESG 132
Query: 61 IERYEPLNWILIPVEEY--HAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAA 118
+ + + PT + + V G V HC +G+ RTG + A
Sbjct: 133 ESSQSINDAATRYMTDEYRQFPTRNGAQRALHRVVTLLAAGRPVLTHCFAGKDRTGFVVA 192
Query: 119 CYLVYFLGMTPE 130
L +G+ +
Sbjct: 193 LVL-EAVGLDRD 203
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 33.5 bits (77), Expect = 0.019
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 10/66 (15%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGVMAACYLVYFLGMTPERAI------TTL 136
+ I + VH G G++ A + + E A+ +
Sbjct: 504 TFELINV-IKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQ-LENENAVDVFQVAKMI 561
Query: 137 RLARPG 142
L RPG
Sbjct: 562 NLMRPG 567
Score = 28.9 bits (65), Expect = 0.77
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
V+ F+ + + E V VHC +G GRTG
Sbjct: 213 VLTFVR-RSSAARMPETGPVLVHCSAGVGRTGT 244
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 33.2 bits (76), Expect = 0.024
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 104 VHCRSGRGRTGVMAACYLVYFLGMTPE-----RAITTLRLARPG 142
+HCR G +TG+ A + T E + + LR AR G
Sbjct: 544 IHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRKARLG 587
Score = 28.2 bits (63), Expect = 1.2
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
++K VN + + VH +G GRTG
Sbjct: 208 LLKLRR-RVNAFSNFFSGPIVVHSSAGVGRTGT 239
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: c.46.1.3
Length = 129
Score = 30.9 bits (70), Expect = 0.069
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 70 ILIPVEEYHAPTMRQVIKFIEFCVNCRQKGEAVGVHCRSGRGRTGVMAACYLV 122
I +P A M + F+E + + + + V C+SG GR+ A L+
Sbjct: 53 INVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSG-GRSI-KATTDLL 103
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 30.2 bits (69), Expect = 0.18
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 85 VIKFIEFCVNCRQKGEAVG---VHCRSGRGRTGV 115
+I I V +Q+ VHC +G GRTG
Sbjct: 160 MINIIAA-VQKQQQQSGNHPITVHCSAGAGRTGT 192
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 30.0 bits (68), Expect = 0.26
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 85 VIKFIEFCVNCRQKGEAVGVHCRSGRGRTGV 115
++ FI + + + HC +G GR+G
Sbjct: 226 LLTFIS-YMRHIHRSGPIITHCSAGIGRSGT 255
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 29.9 bits (67), Expect = 0.30
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 11/45 (24%)
Query: 85 VIKFIEFCVNCRQKGEAVG----------VHCRSGRGRTGVMAAC 119
+ + V + A G +HC G GRTG MAA
Sbjct: 291 LEYLADR-VKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAA 334
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 29.2 bits (66), Expect = 0.47
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
+++F+ R E + VHC +G GR+G
Sbjct: 220 LVRFVR-AFRDRIGAEQRPIVVHCSAGVGRSGT 251
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 29.2 bits (66), Expect = 0.48
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
+++ I V C Q+ ++ + +HC +G GRTGV
Sbjct: 205 ILELIWD-VRCYQEDDSVPICIHCSAGCGRTGV 236
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 29.2 bits (66), Expect = 0.49
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
+ F+ V ++ G+ V VHC +G GRTGV
Sbjct: 222 FLDFVC-HVRNKRAGKEEPVVVHCSAGIGRTGV 253
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 29.5 bits (66), Expect = 0.49
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 85 VIKFIEFCVNCRQKGEA----VGVHCRSGRGRTGV 115
V+ F++ +N RQ+ + VH +G GRTG
Sbjct: 429 VLSFLD-QINQRQESLPHAGPIIVHSSAGIGRTGT 462
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 29.5 bits (66), Expect = 0.50
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 85 VIKFIEFCVNCRQKGEAVG----VHCRSGRGRTGV 115
V+ F++ +N RQ+ VHC +G GRTG
Sbjct: 429 VLSFLD-QINQRQESLPHAGPIIVHCSAGIGRTGT 462
Score = 25.6 bits (56), Expect = 9.1
Identities = 5/11 (45%), Positives = 5/11 (45%)
Query: 104 VHCRSGRGRTG 114
V C GR G
Sbjct: 169 VMCEGGRYTVG 179
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 29.1 bits (66), Expect = 0.57
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
++ F VN +G + + VHC G GRTG
Sbjct: 209 LLDFRR-KVNKCYRGRSCPIIVHCSDGAGRTGT 240
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 28.8 bits (65), Expect = 0.59
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
V+ F+ + + E V VHC +G GRTG
Sbjct: 231 VLTFVR-RSSAARMPETGPVLVHCSAGVGRTGT 262
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 29.0 bits (65), Expect = 0.71
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 85 VIKFIEFCVNCRQKGEAVG----VHCRSGRGRTGV 115
V+ F+E V+ +Q+ VHC +G GRTG
Sbjct: 435 VLDFLE-EVHHKQESIMDAGPVVVHCSAGIGRTGT 468
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 28.3 bits (64), Expect = 0.87
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
++ F+ V EA + VHC +G GRTG
Sbjct: 197 LLGFVR-QVKFLNPPEAGPIVVHCSAGAGRTGC 228
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 28.4 bits (64), Expect = 0.93
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 85 VIKFIEFCVNCRQKGEAVGVHCRSGRGRTGV 115
+ + NC + VHC +G GRTG
Sbjct: 209 FDELLSVIKNCVTTSPIL-VHCSAGIGRTGT 238
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 28.4 bits (64), Expect = 0.95
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Query: 85 VIKFIEFCVNCRQKGEAVG----VHCRSGRGRTGV 115
V+ F+E V+ +Q+ VHC +G GRTG
Sbjct: 222 VLDFLE-EVHHKQESIMDAGPVVVHCSAGIGRTGT 255
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 28.4 bits (64), Expect = 0.98
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
++KF++ V A + VHC +G GRTG
Sbjct: 210 MLKFLK-KVKACNPQYAGAIVVHCSAGVGRTGT 241
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 28.1 bits (63), Expect = 1.0
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 6/36 (16%)
Query: 85 VIKFIEFCVNCRQKGEAVG-----VHCRSGRGRTGV 115
++ + V + E VH +G GRTG
Sbjct: 213 LLHLVRE-VEEAAQQEGPHCAPIIVHSSAGIGRTGC 247
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 28.4 bits (64), Expect = 1.0
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 85 VIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
++ +E Q + VHC +G GRTGV
Sbjct: 211 MLAMVEE-ARRLQGSGPEPLCVHCSAGCGRTGV 242
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 28.1 bits (62), Expect = 1.0
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 14/65 (21%)
Query: 6 PPEAKEKEGPRNFSWIVPDELAAMACPDTRDHLKTLSY---RG--VCH---LVSLSEECI 57
++ G R P+ + CP+ + + + G VC LV LS++ +
Sbjct: 4 RESIDKRAGRR-----GPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLV-LSDKLV 57
Query: 58 PDGIE 62
E
Sbjct: 58 DTRSE 62
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 28.2 bits (63), Expect = 1.1
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 104 VHCRSGRGRTGVMAACYLVYFLGMTP---ERAITTLRLARPGSL 144
+H R+G GRT + + + E ++ +R+ R G +
Sbjct: 239 IHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIM 282
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 28.0 bits (63), Expect = 1.3
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
Query: 85 VIKFIEFCVNCRQKGEAVG----VHCRSGRGRTGV 115
V+ F++ +N RQ+ VH +G GRTG
Sbjct: 187 VLSFLDQ-INQRQESLPHAGPIIVHSSAGIGRTGT 220
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 28.0 bits (63), Expect = 1.4
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 72 IPVEEYHAPTMRQVIKFIEFCVNCRQKGEA--VGVHCRSGRGRTGV 115
+P +++F+ V + + +HC +G GRTG
Sbjct: 192 VPTANAAES----ILQFVHM-VRQQATKSKGPMIIHCSAGVGRTGT 232
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 27.2 bits (61), Expect = 1.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 85 VIKFIEFCVNCRQKGEAVGVHCRSGRGRTGV 115
++F+ + + R E V VHC +G GRTGV
Sbjct: 195 FLEFVNYVRSLRVDSEPVLVHCSAGIGRTGV 225
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 27.2 bits (61), Expect = 2.1
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 85 VIKFIEFCVNCRQKGEAVG---VHCRSGRGRTGV 115
+++ + R E G VHC +G GRTG
Sbjct: 205 LLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGC 238
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 27.3 bits (61), Expect = 2.2
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Query: 85 VIKFIEFCVNCRQKGEAVG----VHCRSGRGRTGV 115
+++ + V + A VHC +G GRTG
Sbjct: 216 LLRLVAE-VEESPETAAHPGPIVVHCSAGIGRTGC 249
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 26.9 bits (60), Expect = 2.7
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 85 VIKFIEFCVNCRQKGEAVG---VHCRSGRGRTGV 115
+I F + ++ VHC +G GRTG
Sbjct: 220 LINFRYLVRDYMKQIPPESPILVHCSAGVGRTGT 253
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 26.8 bits (60), Expect = 2.9
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 85 VIKFIEFCVNCRQKGEAVG---VHCRSGRGRTGV 115
+I+F+ + + G VHC +G GRTG
Sbjct: 201 LIQFVRTVRDYINRSPGAGPTVVHCSAGVGRTGT 234
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 26.8 bits (60), Expect = 3.0
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 5/35 (14%)
Query: 85 VIKFIEFCVNCRQKGEAVG----VHCRSGRGRTGV 115
+ F+ V VHC +G GR+G
Sbjct: 197 FLNFLF-KVRESGSLSPEHGPVVVHCSAGIGRSGT 230
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 26.5 bits (59), Expect = 3.9
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 6/34 (17%)
Query: 88 FIEFCVNCRQKGEAVG------VHCRSGRGRTGV 115
F+ F R+ G +HC +G GR+G
Sbjct: 192 FLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGT 225
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural
genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP:
c.108.1.15
Length = 239
Score = 25.8 bits (57), Expect = 7.1
Identities = 12/107 (11%), Positives = 27/107 (25%), Gaps = 21/107 (19%)
Query: 21 IVPDELAAMACPDTRDHLKTLSYRGVCHLVS------LSEECIPD--------GIERYEP 66
I+ + + A + L R ++V+ + +P G
Sbjct: 15 IIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEI-SRFLPLDINMICYHGACSKIN 73
Query: 67 LNWILIPVEEYHAPTMRQVIKFIEFCVNCRQ------KGEAVGVHCR 107
+ + ++ + V+ K AV H
Sbjct: 74 GQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLG 120
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint
center for structura genomics, JCSG, protein structure
initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Length = 223
Score = 25.7 bits (56), Expect = 7.3
Identities = 5/23 (21%), Positives = 8/23 (34%)
Query: 59 DGIERYEPLNWILIPVEEYHAPT 81
E W+ +P E + T
Sbjct: 178 VNDEVLGRNAWLRLPEGEALSAT 200
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 25.7 bits (57), Expect = 7.3
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 104 VHCRSGRGRTGV 115
VHC +G GRTGV
Sbjct: 257 VHCSAGVGRTGV 268
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 25.3 bits (56), Expect = 8.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 104 VHCRSGRGRTGV 115
VHC +G GRTG
Sbjct: 238 VHCSAGIGRTGT 249
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.140 0.453
Gapped
Lambda K H
0.267 0.0418 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,561,229
Number of extensions: 147151
Number of successful extensions: 417
Number of sequences better than 10.0: 1
Number of HSP's gapped: 394
Number of HSP's successfully gapped: 89
Length of query: 154
Length of database: 6,701,793
Length adjustment: 85
Effective length of query: 69
Effective length of database: 4,328,508
Effective search space: 298667052
Effective search space used: 298667052
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)