RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15050
(323 letters)
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 314
Score = 200 bits (508), Expect = 7e-63
Identities = 131/294 (44%), Positives = 175/294 (59%), Gaps = 20/294 (6%)
Query: 5 IAPTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEA 64
+A I LNNG ++P LGLGTW+ PG V AV AID GYRHID A VYQ E ++G A
Sbjct: 1 MASRILLNNGAKMPILGLGTWKSPPG--QVTEAVKVAIDVGYRHIDCAHVYQNENEVGVA 58
Query: 65 IKEKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKG 124
I+EK+ +KREELFI +K+W T+ E +V ACQ + L LDY+DLYLIHWP K
Sbjct: 59 IQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKP 118
Query: 125 KDVH---DTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCA--KI 179
D S ++ +I +TW ME+ V++GL K+IG+SNFN Q++ IL+ K
Sbjct: 119 GKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKY 178
Query: 180 KPVNLQIEVHPYLNQRKLIDFCKKHNITVTAYSPLGA---PWTNPDKPLLINDDVLKEIA 236
KP QIE HPYL Q KLI +C+ I VTAYSPLG+ PW P+ P L+ D +K IA
Sbjct: 179 KPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIA 238
Query: 237 DKYRKSPAQVVLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
K+ K+ AQV++R+ + + + V S T E +++ ELS
Sbjct: 239 AKHNKTTAQVLIRFPM----------QRNLVVIPKSVTPERIAENFKVFDFELS 282
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 188 bits (479), Expect = 1e-58
Identities = 117/293 (39%), Positives = 167/293 (56%), Gaps = 20/293 (6%)
Query: 8 TIQLNNGQEIPALGLGTWQ-GEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAIK 66
++LN+G +P LG GT+ E AI+AG+RHID+A +Y E +G AI+
Sbjct: 2 CVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIR 61
Query: 67 EKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKD 126
KI G +KRE++F T+K+W T P++V A +NS KK LDYVDLYLIH P ++K +
Sbjct: 62 SKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGE 121
Query: 127 VHDTSFEGEH---NNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAK--IKP 181
+ E + V + TW MEKC + GLAKSIGVSNFN Q++ IL+ KP
Sbjct: 122 ELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKP 181
Query: 182 VNLQIEVHPYLNQRKLIDFCKKHNITVTAYSPLG----APWTNPDKPLLINDDVLKEIAD 237
V Q+E HPY N+ KL+DFCK +I + AYS LG W +P+ P+L+ D VL +A
Sbjct: 182 VCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAK 241
Query: 238 KYRKSPAQVVLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
K++++PA + LRY + + V V S E+ Q+ +L+
Sbjct: 242 KHKRTPALIALRYQL----------QRGVVVLAKSYNEQRIRQNVQVFEFQLT 284
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 319
Score = 185 bits (470), Expect = 4e-57
Identities = 115/300 (38%), Positives = 169/300 (56%), Gaps = 21/300 (7%)
Query: 1 MSPAIAPTIQLNNGQEIPALGLGTWQGEPGSGD-VKNAVLAAIDAGYRHIDTAEVYQTEG 59
M +I+ + LN+G IP LG GT E + D V A AID G+RH D+A +Y+ E
Sbjct: 1 MD-SISLRVALNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEE 59
Query: 60 DIGEAIKEKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWP 119
++G+AI+ KI G +KRE++F T+K+W T P++V + + K LDYVDLY+IH+P
Sbjct: 60 EVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFP 119
Query: 120 FAIKGKDVH---DTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDC 176
A++ D+ D + V I +TW MEKC + GLAKSIGVSNFN Q++RIL+
Sbjct: 120 MALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNK 179
Query: 177 AKIKP--VNLQIEVHPYLNQRKLIDFCKKHNITVTAYSPLG----APWTNPDKPLLINDD 230
+K V Q+E H YLNQ K++D+CK +I + +Y LG W + P+L++D
Sbjct: 180 PGLKYKPVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVLLDDP 239
Query: 231 VLKEIADKYRKSPAQVVLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
VL IA KY+++PA V LRY + + V S + + +L+
Sbjct: 240 VLCAIAKKYKQTPALVALRYQL----------QRGVVPLIRSFNAKRIKELTQVFEFQLA 289
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis)
[TaxId: 45596]}
Length = 319
Score = 181 bits (459), Expect = 1e-55
Identities = 109/300 (36%), Positives = 157/300 (52%), Gaps = 28/300 (9%)
Query: 7 PTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAIK 66
P I+L++G +P++G G W+ V AI AGYR D AE Y E ++G+ +K
Sbjct: 3 PDIKLSSGHLMPSIGFGCWKLANA--TAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVK 60
Query: 67 EKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKD 126
I+ G +KREE+F+T+K+W + +P V A + L +DYVDL+LIH+P A K
Sbjct: 61 RAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVP 120
Query: 127 VHDTSFEG---------EHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCA 177
+ + G + +V I ETW+ +EK V G KSIGVSNF + +L A
Sbjct: 121 IEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGA 180
Query: 178 KIKPVNLQIEVHPYLNQRKLIDFCKKHNITVTAYSPLGAPWTNP-------DKPLLINDD 230
IKP LQ+E HPYL Q KLI+F +K +T+TAYS G + P L D
Sbjct: 181 TIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSFVEMNQGRALNTPTLFAHD 240
Query: 231 VLKEIADKYRKSPAQVVLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
+K IA KY K+PA+V+LR+ + + V S E +Q+ S +L+
Sbjct: 241 TIKAIAAKYNKTPAEVLLRWAA----------QRGIAVIPKSNLPERLVQNRSFNTFDLT 290
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced)
protein {Mouse (Mus musculus) [TaxId: 10090]}
Length = 315
Score = 177 bits (448), Expect = 5e-54
Identities = 122/293 (41%), Positives = 171/293 (58%), Gaps = 20/293 (6%)
Query: 6 APTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAI 65
A ++L+ ++P +GLGTW+ P VK AV AAIDAGYRHID A Y E ++GEAI
Sbjct: 1 ATFVELSTKAKMPIVGLGTWKSPPN--QVKEAVKAAIDAGYRHIDCAYAYCNENEVGEAI 58
Query: 66 KEKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGK 125
+EKI ++RE+LFI +K+W T FE ++ +A Q + L LDY+DLYLIHWP ++
Sbjct: 59 QEKIKEKAVQREDLFIVSKLWPTCFEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPG 118
Query: 126 DV---HDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKI--K 180
D + + E W GME+ V++GL K++GVSNFN QI+R+L+ + K
Sbjct: 119 KELFPKDDQGRILTSKTTFLEAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHK 178
Query: 181 PVNLQIEVHPYLNQRKLIDFCKKHNITVTAYSPLG---APWTNPDKPLLINDDVLKEIAD 237
PV Q+E HPYL Q KLI +C I+VTAYSPLG P P+ P L+ D +KEIA
Sbjct: 179 PVTNQVECHPYLTQEKLIQYCHSKGISVTAYSPLGSPDRPSAKPEDPSLLEDPKIKEIAA 238
Query: 238 KYRKSPAQVVLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
K+ K+ AQV++R+ + + V V S T ++ +LS
Sbjct: 239 KHEKTSAQVLIRFHI----------QRNVVVIPKSVTPSRIQENIQVFDFQLS 281
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 324
Score = 175 bits (444), Expect = 3e-53
Identities = 111/292 (38%), Positives = 172/292 (58%), Gaps = 19/292 (6%)
Query: 6 APTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAI 65
A + L+ GQ++P +GLGTW+ EPG VK A+ A+ GYRHID A ++ E +IGEA+
Sbjct: 2 ASCVLLHTGQKMPLIGLGTWKSEPG--QVKAAIKYALTVGYRHIDCAAIFGNELEIGEAL 59
Query: 66 KEKINSGD-IKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKG 124
+E + G + REELF+T+K+W T P+ V A + + L L+Y+DLYL+HWP+A +
Sbjct: 60 QETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFER 119
Query: 125 KDVH---DTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKP 181
D + ++ ++TW+ +E V KGL +++G+SNF+S QI +L A ++P
Sbjct: 120 GDNPFPKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRP 179
Query: 182 VNLQIEVHPYLNQRKLIDFCKKHNITVTAYSPL---GAPWTNPDKPLLINDDVLKEIADK 238
LQ+E HPYL Q +LI C+ + VTAYSPL W +P++P+L+ + V++ +A+K
Sbjct: 180 AVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEK 239
Query: 239 YRKSPAQVVLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
Y +SPAQ++LR+ V + KV S T Q+ S
Sbjct: 240 YNRSPAQILLRWQV----------QRKVICIPKSVTPSRIPQNIQVFDFTFS 281
>d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 312
Score = 160 bits (406), Expect = 9e-48
Identities = 115/296 (38%), Positives = 155/296 (52%), Gaps = 31/296 (10%)
Query: 7 PTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAIK 66
+I+L+NG E+P +GLGTWQ P +V AV A+ AGYR IDTA VYQ E IG AIK
Sbjct: 2 ASIKLSNGVEMPVIGLGTWQSSPA--EVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIK 59
Query: 67 EKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKD 126
E + G +KREELFITTK W P + + S KKL L+YVDLYL H P A
Sbjct: 60 ELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFND-- 117
Query: 127 VHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPVNLQI 186
EH +E+ WR + + GLAK++GVSN+N+ QI R L N Q+
Sbjct: 118 -----DMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQV 172
Query: 187 EVHPYLNQRKLIDFCKKHNITVTAYSPLGAPW------------TNPDKPLLINDDVLKE 234
E+H Y Q +DFCKKHNI+VT+Y+ LG+P P + D +
Sbjct: 173 ELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPAPSDLQDQNVLA 232
Query: 235 IADKYRKSPAQVVLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
+A+K K+PAQV+LRY + + + S E +++ L+
Sbjct: 233 LAEKTHKTPAQVLLRYAL----------DRGCAILPKSIQENRIKENFEVFDFSLT 278
>d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Thermotoga maritima [TaxId: 2336]}
Length = 284
Score = 153 bits (386), Expect = 3e-45
Identities = 96/284 (33%), Positives = 145/284 (51%), Gaps = 35/284 (12%)
Query: 7 PTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAIK 66
P + LNNG E+P LG G +Q P + V AI GYR IDTA Y E +G AIK
Sbjct: 3 PKVTLNNGVEMPILGYGVFQIPPE--KTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIK 60
Query: 67 EKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKD 126
I+ G ++REELF+TTK+W++ + +A + S KKL L+Y+DLYLIH PF
Sbjct: 61 RAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFGD---- 116
Query: 127 VHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPVNLQI 186
+ W+ ME+ + GL ++IGVSNF ++ ++ +I P QI
Sbjct: 117 --------------VHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQI 162
Query: 187 EVHPYLNQRKLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKYRKSPAQV 246
E+HP+ +++ I+F + +NI A+ P N + VL+ IA+KY K+ AQV
Sbjct: 163 EIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKNIFQN-----GVLRSIAEKYGKTVAQV 217
Query: 247 VLRYLVFLMVCRLSSGEHKVFVEQGSPTEEHAIQSYSHLPGELS 290
+LR+L + + + E ++ S EL+
Sbjct: 218 ILRWLT----------QKGIVAIPKTVRRERMKENISIFDFELT 251
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 152 bits (385), Expect = 5e-45
Identities = 91/249 (36%), Positives = 135/249 (54%), Gaps = 28/249 (11%)
Query: 4 AIAPTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGE 63
A I+L +G +P LGLG WQ +V A+ A++ GYR IDTA Y+ E +G+
Sbjct: 1 ANPTVIKLQDGNVMPQLGLGVWQASNE--EVITAIQKALEVGYRSIDTAAAYKNEEGVGK 58
Query: 64 AIKEKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIK 123
A + + + REELFITTK+W + +A +S KKL LDY+DLYL+HWP
Sbjct: 59 A----LKNASVNREELFITTKLWNDDHKRPR--EALLDSLKKLQLDYIDLYLMHWPV--- 109
Query: 124 GKDVHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPVN 183
E W+GM + ++GL KSIGV NF ++R++D + PV
Sbjct: 110 ------------PAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVI 157
Query: 184 LQIEVHPYLNQRKLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKYRKSP 243
QIE+HP + QR+L + H I ++SPL + V++++ADKY K+P
Sbjct: 158 NQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVF-----DQKVIRDLADKYGKTP 212
Query: 244 AQVVLRYLV 252
AQ+V+R+ +
Sbjct: 213 AQIVIRWHL 221
>d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Corynebacterium sp. [TaxId: 1720]}
Length = 262
Score = 132 bits (332), Expect = 2e-37
Identities = 86/246 (34%), Positives = 123/246 (50%), Gaps = 26/246 (10%)
Query: 7 PTIQLNNGQEIPALGLGTWQGEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAIK 66
P+I LN+G IP LG G ++ P D + AV A++ GYRHIDTA +Y E E +
Sbjct: 3 PSIVLNDGNSIPQLGYGVFKVPPA--DTQRAVEEALEVGYRHIDTAAIYGNE----EGVG 56
Query: 67 EKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKD 126
I + I R++LFITTK+W + D A S KL LD VDLYL+HWP
Sbjct: 57 AAIAASGIARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNY 116
Query: 127 VHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPVNLQI 186
VH W M + GL +SIGVSN ++RI+ + P QI
Sbjct: 117 VHA---------------WEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQI 161
Query: 187 EVHPYLNQRKLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKYRKSPAQV 246
E+HP QR++ D+ H++ + ++ PLG + + + A + K+PAQ
Sbjct: 162 ELHPAYQQREITDWAAAHDVKIESWGPLGQGKYDLF-----GAEPVTAAAAAHGKTPAQA 216
Query: 247 VLRYLV 252
VLR+ +
Sbjct: 217 VLRWHL 222
>d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]}
Length = 346
Score = 129 bits (324), Expect = 2e-35
Identities = 60/290 (20%), Positives = 99/290 (34%), Gaps = 49/290 (16%)
Query: 12 NNGQEIPALGLGTWQ-GEPGS-GDVKNAVLAAIDAGYRHIDTAEVYQT-EGDIGEAIKEK 68
++ E+ LGLGT GE S D + A+ G ID AE+Y + + E
Sbjct: 8 HSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTET 67
Query: 69 INSGDIKREELFITTKVWITHFEPDM----------------VVQACQNSCKKLGLDYVD 112
+ + + P + +A +S K+L DY+D
Sbjct: 68 YVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLD 127
Query: 113 LYLIHWPFAIK-GKDVHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIK 171
LY +HWP S+ VS+ +T + + G + IGVSN + +
Sbjct: 128 LYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVM 187
Query: 172 RILD----CAKIKPVNLQIEVHPY--LNQRKLIDFCKKHNITVTAYSPLG-----APWTN 220
R L + V +Q + L + + + + AYS LG + N
Sbjct: 188 RYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLN 247
Query: 221 PDKP------------------LLINDDVLKEIADKYRKSPAQVVLRYLV 252
KP +IA ++ PAQ+ L ++
Sbjct: 248 GAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVR 297
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus
subtilis [TaxId: 1423]}
Length = 311
Score = 111 bits (279), Expect = 3e-29
Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 52/276 (18%)
Query: 12 NNGQEIPALGLGTWQ-------GEPGSGDVKNAVLAAIDAGYRHIDTAEVY---QTEGDI 61
+ ++ +GLGT K V AI G +DTA +Y ++E I
Sbjct: 7 KSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELI 66
Query: 62 GEAIKEKINSGDIKREELFITTKVWITHFEPDMVV--QACQNSCKKLGLDYVDLYLIHWP 119
GE ++E + + + F+ ++ S K+L DY+DL+ IH+P
Sbjct: 67 GEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFP 126
Query: 120 FAIKGKDVHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKI 179
+ +E + + + G +SIGVSNF+ Q+K +
Sbjct: 127 ----------------DEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLV 170
Query: 180 KPVNLQIEVHPYLNQRKLIDFCKKHNITVTAYSPL------GAPWTNPDKP--------- 224
+ + + ++ + K+HNI+ Y PL G + P
Sbjct: 171 DVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQE 230
Query: 225 ---------LLINDDVLKEIADKYRKSPAQVVLRYL 251
+ + L IA+K+ +VL +
Sbjct: 231 HFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWY 266
>d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 326
Score = 103 bits (258), Expect = 3e-26
Identities = 53/284 (18%), Positives = 99/284 (34%), Gaps = 60/284 (21%)
Query: 12 NNGQEIPALGLGTWQ---GEPGSGDVKNAVLAAIDAGYRHIDTAEVY---QTEGDIGEAI 65
+G + LGLGTW G+ ++ + A D G DTAEVY + E +G I
Sbjct: 9 KSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNII 68
Query: 66 KE---KINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAI 122
K+ + +S I + + +++ + S ++L L+YVD+ + P
Sbjct: 69 KKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDP- 127
Query: 123 KGKDVHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPV 182
N +EET R M + +G+A G S ++S +I A+ +
Sbjct: 128 ---------------NTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNL 172
Query: 183 NLQIEVHPYLN-------QRKLIDFCKKHNITVTAYSPLGAPWTNPD------------- 222
I + + +L + K + +SPL +
Sbjct: 173 IPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASL 232
Query: 223 ---------------KPLLINDDVLKEIADKYRKSPAQVVLRYL 251
+ L+ IA++ + Q+ + +
Sbjct: 233 KGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWC 276
>d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia
coli [TaxId: 562]}
Length = 298
Score = 92.9 bits (229), Expect = 3e-22
Identities = 43/254 (16%), Positives = 84/254 (33%), Gaps = 13/254 (5%)
Query: 7 PTIQL-NNGQEIPALGLGTWQ---GEPGSGDVKNAVLAAIDAGYRHIDTAEVYQTEGDIG 62
I + G E +G W+ + + + + +D G +D A++Y
Sbjct: 3 QRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGG-YQCE 61
Query: 63 EAIKEKINSGDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAI 122
A E + RE + I +K I + V + + + + LI+
Sbjct: 62 AAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLAT-- 119
Query: 123 KGKDVHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPV 182
+ + +E + + G + GVSNF Q +
Sbjct: 120 --DHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLA 177
Query: 183 NLQIEVHPY---LNQRKLIDFCKKHNITVTAYSP-LGAPWTNPDKPLLINDDVLKEIADK 238
Q+E+ P L +D ++ + A+S G N D + D++ +
Sbjct: 178 TNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVAEEL 237
Query: 239 YRKSPAQVVLRYLV 252
S QVV +++
Sbjct: 238 NAGSIEQVVNAWVL 251
>d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus
subtilis [TaxId: 1423]}
Length = 333
Score = 84.0 bits (206), Expect = 5e-19
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 28/214 (13%)
Query: 12 NNGQEIPALGLGTWQ------GEPGSGDVKNAVLAAIDAGYRHIDTAEVY---QTEGDIG 62
+ G E +GLGTW G + AA+D G IDTA Y Q+E +G
Sbjct: 8 DTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVG 67
Query: 63 EAIKEKINSGDIKREELFITTKVWITHFEPDM---VVQACQNSCKKLGLDYVDLYLIHWP 119
+AIKE + + F +V+ +NS K+L DY+DLY +HWP
Sbjct: 68 KAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWP 127
Query: 120 FAIKGKDVHDTSFEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKI 179
V IEET M++ + G ++IGVSNF+ Q+ A +
Sbjct: 128 ----------------DPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPL 171
Query: 180 KPVNLQIEVHPYLNQRKLIDFCKKHNITVTAYSP 213
+ + + ++ + K + IT Y
Sbjct: 172 HTIQPPYNLFEREMEESVLPYAKDNKITTLLYGS 205
>d1gvea_ c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 324
Score = 77.4 bits (189), Expect = 1e-16
Identities = 34/275 (12%), Positives = 64/275 (23%), Gaps = 50/275 (18%)
Query: 17 IPALGLGTWQ--GEPGSGDVKNAVLAAIDAGYRHIDTAEVY---QTEGDIGEAIKEKINS 71
PA LG + +V A + G+ IDTA VY Q+E +G+
Sbjct: 2 RPATVLGAMEMGRRMDVTSSSRSVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGL--- 58
Query: 72 GDIKREELFITTKVWITHFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKDVHDTS 131
++ I TK + L + + + +
Sbjct: 59 -GRSGCKVKIATKAAPMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEET 117
Query: 132 FEGEHNNVSIEETWRGMEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPVNLQIEVHPY 191
+ H + I +G I + + Q+E
Sbjct: 118 LQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVE---- 173
Query: 192 LNQRKLIDFCKKHNITVTAYSPLGAPWTNPDKPL-------------------------- 225
+L + + A++PL
Sbjct: 174 ---TELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMDRYW 230
Query: 226 --------LINDDVLKEIADKYRKSPAQVVLRYLV 252
+ + LK S +R++
Sbjct: 231 KEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMY 265
>d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas
fluorescens [TaxId: 294]}
Length = 346
Score = 28.7 bits (63), Expect = 0.94
Identities = 5/55 (9%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 196 KLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKYRKSPAQVVLRY 250
+L+ + ++ TV ++ + P ++ ++ ++ + V +
Sbjct: 64 RLVSWAAQNGQTVHGHALVWHPSYQLPNWASDSNANFRQDFARHIDT---VAAHF 115
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId:
90371]}
Length = 152
Score = 26.8 bits (58), Expect = 2.6
Identities = 20/101 (19%), Positives = 30/101 (29%), Gaps = 3/101 (2%)
Query: 32 GDVKNAVLAAIDAGYRHIDTAEVYQTEGDIGEAIKEKINSGDIKREELFITTKVWITHFE 91
G + VL+AID+ I T DI +A+ G + + + T
Sbjct: 12 GSARVLVLSAIDSAKTSIRMMAYSFTAPDIMKALVAAKKRGVDVK---IVIDERGNTGRA 68
Query: 92 PDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKDVHDTSF 132
+ NS L D + V SF
Sbjct: 69 SIAAMNYIANSGIPLRTDSNFPIQHDKVIIVDNVTVETGSF 109
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi
[TaxId: 1708]}
Length = 312
Score = 26.7 bits (58), Expect = 4.4
Identities = 1/42 (2%), Positives = 10/42 (23%)
Query: 196 KLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIAD 237
++ + + ++ + L + +
Sbjct: 65 RVASYAADTGKELYGHTLVWHSQLPDWAKNLNGSAFESAMVN 106
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 168
Score = 26.2 bits (56), Expect = 4.8
Identities = 17/180 (9%), Positives = 49/180 (27%), Gaps = 22/180 (12%)
Query: 31 SGDVKNAVLAAI--DAGYRHIDTAEVYQTEGDIGEAIKEKINSGDIKREELFITTKVWIT 88
SG + +V+ + G+ I + D ++ + +G K + +
Sbjct: 9 SGGLDTSVILKWLCEKGFDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDLRREFVTD 68
Query: 89 HFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKDVHDTSFEGEHNNVSIEETWRGM 148
+ ++ A L + + + + + + +
Sbjct: 69 YIFTALLGNAMYEGRYLL----GTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVR 124
Query: 149 EKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPVNLQIEVHPYLNQRKLIDFCKKHNITV 208
+ L ++ V I P + + + LI++ + I +
Sbjct: 125 FELTYAALNPNLKV----------------ISPWKDPEFLAKFKGRTDLINYAMEKGIPI 168
>d1hqsa_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Bacillus
subtilis [TaxId: 1423]}
Length = 423
Score = 26.2 bits (57), Expect = 5.8
Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Query: 25 WQGEPGSGD-VKNAVLAAIDAGYRHIDTAEVYQTEG-----DIGEAIKEKIN 70
G + D V ++ I + D A + + GE + + ++
Sbjct: 372 HLGWNEAADLVIKSMEKTIASKVVTYDFARLMDGATEVKCSEFGEELIKNMD 423
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus
[TaxId: 155077]}
Length = 364
Score = 26.4 bits (57), Expect = 6.0
Identities = 4/24 (16%), Positives = 12/24 (50%)
Query: 196 KLIDFCKKHNITVTAYSPLGAPWT 219
+D+ ++N+TV ++ +
Sbjct: 75 AFVDWATENNMTVHGHALVWHSDY 98
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus
aurantiacus [TaxId: 5087]}
Length = 303
Score = 26.2 bits (57), Expect = 6.0
Identities = 4/55 (7%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 196 KLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKYRKSPAQVVLRY 250
L+++ +++ + ++ + + + + L + + ++ RY
Sbjct: 68 YLVNWAQQNGKLIRGHTLVWHSQLPSWVSSITDKNTLTNVMKNHIT---TLMTRY 119
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces
lividans [TaxId: 1916]}
Length = 302
Score = 25.9 bits (56), Expect = 6.5
Identities = 5/55 (9%), Positives = 17/55 (30%), Gaps = 4/55 (7%)
Query: 196 KLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKYRKSPAQVVLRY 250
++ ++ ++ V ++ L + + + D V+ Y
Sbjct: 65 RVYNWAVQNGKQVRGHTLAWHSQQPGWMQSLSGSALRQAMIDHIN----GVMAHY 115
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella
nidulans (Aspergillus nidulans) [TaxId: 162425]}
Length = 301
Score = 25.9 bits (56), Expect = 6.7
Identities = 6/44 (13%), Positives = 18/44 (40%)
Query: 196 KLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKY 239
L+D+ +HN V ++ + + + + L+ + +
Sbjct: 65 YLVDYATQHNKKVRGHTLVWHSQLPSWVSSIGDANTLRSVMTNH 108
>d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH
{Thiobacillus ferrooxidans [TaxId: 920]}
Length = 357
Score = 25.8 bits (56), Expect = 8.1
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 34 VKNAVLAAIDAGYRHID---TAEVYQTEGDIGEAIKEKIN 70
V+ AV +D G R D +G A+ +N
Sbjct: 316 VEAAVQRVLDQGLRTADIAAPGTPVIGTKAMGAAVVNALN 355
>d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH
{Salmonella typhimurium [TaxId: 90371]}
Length = 363
Score = 25.8 bits (56), Expect = 8.5
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 34 VKNAVLAAIDAGYRHIDTAE--VYQTEGDIGEAIKEKINSG 72
++ A+ A++ G R D A + ++G+ I + G
Sbjct: 322 IEQAINRALEEGVRTGDLARGAAAVSTDEMGDIIARYVAEG 362
>d1riqa2 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) {Aquifex
aeolicus [TaxId: 63363]}
Length = 236
Score = 25.4 bits (55), Expect = 8.9
Identities = 21/107 (19%), Positives = 31/107 (28%), Gaps = 20/107 (18%)
Query: 195 RKLIDFCKKHNITVTAYSPLGAPWTNPDKPLL-IN-------DDVLKEIADKY-RKSPAQ 245
+ F +K T +PL D LL +N + L Y R + Q
Sbjct: 9 ELFLSFFEKKGHTRVKSAPLVPEN---DPTLLFVNAGMVPFKNVFLGLEKRPYKRATSCQ 65
Query: 246 VVLRYLVFLMVCRL--SSGEHKVFVEQ------GSPTEEHAIQSYSH 284
LR + H F E G ++ AI+
Sbjct: 66 KCLRVSGKHNDLEQVGYTSRHHTFFEMLGNFSFGDYFKKEAIEYAWE 112
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain
{Bacillus sp. [TaxId: 1409]}
Length = 357
Score = 25.6 bits (55), Expect = 9.6
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 196 KLIDFCKKHNITVTAYSPLGAPWTNPDKPLLINDDVLKEIADKYRKSPAQVVLRY 250
+ I+ +H++ V + AP D +EIAD Y+ P + +
Sbjct: 92 EGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIW 146
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 188
Score = 25.4 bits (54), Expect = 9.7
Identities = 21/183 (11%), Positives = 43/183 (23%), Gaps = 19/183 (10%)
Query: 31 SGDVKNAVLAAI--DAGYRHID-TAEVYQTEGDIGEAIKEKINSGDIKREELFITTKVWI 87
SG + + G TA + Q + + +AI + + L K +
Sbjct: 18 SGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLV 77
Query: 88 THFEPDMVVQACQNSCKKLGLDYVDLYLIHWPFAIKGKDVHDTSFEGEHNNVSIEETWRG 147
+ A N+ Y P + E G
Sbjct: 78 AEGIAAIQCGAFHNTT------GGLTYFNTTPLGRAVTGTMLVAAMKED----------G 121
Query: 148 MEKCVEKGLAKSIGVSNFNSGQIKRILDCAKIKPVNLQIEVHPYLNQRKLIDFCKKHNIT 207
+ + K + F + + KP + + ++ +F
Sbjct: 122 VNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFD 181
Query: 208 VTA 210
Sbjct: 182 YKM 184
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.136 0.409
Gapped
Lambda K H
0.267 0.0421 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,237,224
Number of extensions: 59607
Number of successful extensions: 266
Number of sequences better than 10.0: 1
Number of HSP's gapped: 222
Number of HSP's successfully gapped: 37
Length of query: 323
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 238
Effective length of database: 1,240,546
Effective search space: 295249948
Effective search space used: 295249948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)