RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15052
(422 letters)
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 262 bits (671), Expect = 4e-86
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+ +GE+D S+ + Q R V + ++ Y T +D+AL+RL PV
Sbjct: 45 KIKNWRNLIAVLGEHDLSEHDGDE--QSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVL 102
Query: 238 APNIVPICLPGSD----DLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMF 293
++VP+CLP L + V+GWG+L + G+ L + VP + + C
Sbjct: 103 TDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQS 162
Query: 294 LRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANL 353
+ G I++ CAG+ +G +DSC+GDSGGP G ++L GI+SWG GCA
Sbjct: 163 RKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATH-YRGTWYLTGIVSWGQGCATVGH 221
Query: 354 PGVCTRISKFVPWVLDT 370
GV TR+S+++ W+
Sbjct: 222 FGVYTRVSQYIEWLQKL 238
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 265 bits (678), Expect = 3e-85
Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
IKIR GE+D +E PYQER + + ++H +N T D+AL+ L+ P+ A NI
Sbjct: 189 DAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIG 248
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEG--GSLPPVLQKVTVPIVSNEKCRSMF--LRAGR 298
ICLP + +GWG+ G +L+K+ +P V +KC++ R G
Sbjct: 249 TICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGL 308
Query: 299 YEFISDIFMCAGFDNGGRDSCQGDSGGPL--QVKGKDGRYFLAGIISWGIGCAEANLPGV 356
+ F+CAG + G+D+C GD G PL RY GI++WGIGC + N+PGV
Sbjct: 309 KFVLDQTFVCAGGE-QGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGV 367
Query: 357 CTRISKFVPWVLDTGDSGGPLQVKGKDGRYFL 388
++ F W+ +Q KG ++
Sbjct: 368 YANVAHFRNWIDQE------MQAKGLSTTPYV 393
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 258 bits (661), Expect = 8e-85
Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
+ + + + VGE+D S Q V V+ Y+ T E D+++++ +
Sbjct: 45 MQGEAPALVSLVVGEHDSSAASTVR--QTHDVDSIFVNENYDPATLENDVSVIKTAVAIT 102
Query: 237 FAPNIVPICLPGSDDLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMFLR 295
F N+ PIC P + + + +GWG ++ GG P VL+ VT+ I +N C +++
Sbjct: 103 FDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVY-- 160
Query: 296 AGRYEFISDIFMCAGFDNG--GRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANL 353
+ I D +CA + G RDSCQGDSGGPL VK G + L GI+SWGIGCA
Sbjct: 161 --TSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCAS-GY 217
Query: 354 PGVCTRISKFVPWVLDT 370
PGV +R+ W+ DT
Sbjct: 218 PGVYSRVGFHAGWITDT 234
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 257 bits (659), Expect = 2e-84
Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+Q +G +D S+ P QER + + + HP +N FT++YD+AL+ LE P E++ +
Sbjct: 56 TQWTAFLGLHDQSQRSAP-GVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVR 114
Query: 243 PICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
PI LP + + G+ VTGWG GG+ +LQK + +++ C ++ +
Sbjct: 115 PISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQ----- 169
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRIS 361
I+ MC GF +GG DSCQGDSGGPL DGR F AG++SWG GCA+ N PGV TR+
Sbjct: 170 ITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLP 229
Query: 362 KFVPWVLDT 370
F W+ +
Sbjct: 230 LFRDWIKEN 238
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 256 bits (656), Expect = 3e-84
Identities = 79/194 (40%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 174 TESVNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLET 233
+ S ++I GE D S E Q V K ++H +++ + D++L++L
Sbjct: 47 VYGDDYENPSGLQIVAGELDMSVNEGSE--QIITVSKIILHENFDYNLLDNDISLLKLSG 104
Query: 234 PVEFAPNIVPICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMF 293
+ F N+ PI LP + VTGWG SEGG+ P VLQKVTVP+VS+E CR+ +
Sbjct: 105 SLTFNDNVAPIALPEQGHTA-TGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADY 163
Query: 294 LRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANL 353
+ I D +CAG GG+DSCQGDSGGPL G +LAGI+SWG GCA
Sbjct: 164 ----GADEILDSMICAGVPEGGKDSCQGDSGGPLAASD-TGSTYLAGIVSWGYGCARPGY 218
Query: 354 PGVCTRISKFVPWV 367
PGV T +S V W+
Sbjct: 219 PGVYTEVSYHVDWI 232
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 254 bits (652), Expect = 2e-83
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
+ K+RVG+ + + E V + H ++ TY++D+A++RL+TP+ F N+
Sbjct: 47 AKRFKVRVGDRNTEQEEGGE--AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNV 104
Query: 242 VPICLPGSD----DLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAG 297
P CLP D L+ + V+G+GR E G L+ + VP V C+
Sbjct: 105 APACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSS---- 160
Query: 298 RYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVC 357
I+ CAG+D D+CQGDSGGP + K YF+ GI+SWG GCA G+
Sbjct: 161 -SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFK-DTYFVTGIVSWGEGCARKGKYGIY 218
Query: 358 TRISKFVPWVLDT 370
T+++ F+ W+ +
Sbjct: 219 TKVTAFLKWIDRS 231
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 254 bits (650), Expect = 3e-83
Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+L S+ +G + S L P R + + +++P YN + D+A++ LE V +
Sbjct: 46 RNLEPSKWTAILGLHMKSNLTSP-QTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNY 104
Query: 238 APNIVPICLPGSDD-LLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
I PI LP + G N ++ GWG + G+ +LQ+ VP++SNE+C+
Sbjct: 105 TDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEY 164
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
I++ +CAG++ GG DSCQGDSGGPL + ++ R+FLAG+ S+G CA N PGV
Sbjct: 165 N----ITENMICAGYEEGGIDSCQGDSGGPLMCQ-ENNRWFLAGVTSFGYECALPNRPGV 219
Query: 357 CTRISKFVPWVLDT 370
R+S+F W+
Sbjct: 220 YARVSRFTEWIQSF 233
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 251 bits (643), Expect = 2e-82
Identities = 58/188 (30%), Positives = 79/188 (42%), Gaps = 13/188 (6%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+ I G D + K + P + TY D AL++L P+
Sbjct: 46 TSITATGGVVDLQSSSA----VKVRSTKVLQAPGFTKETYGKDWALIKLAQPINQ----- 96
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFI 302
P + TV GWG EGGS L K VP VS+ CRS + +
Sbjct: 97 PTLKIATTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSS----SFILV 152
Query: 303 SDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRISK 362
++ +CAG+D D+CQGDSGGP+ K + GI+SWG GCA GV T +S
Sbjct: 153 ANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVST 212
Query: 363 FVPWVLDT 370
F +
Sbjct: 213 FASAIASA 220
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 248 bits (636), Expect = 3e-81
Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF--TYEYDLALVRLETPVEFAP 239
+I + GE++ + E Q+R V++ + H +N TY +D+AL+ L+ P+
Sbjct: 46 GVKITVVAGEHNIEETEHTE--QKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNS 103
Query: 240 NIVPICLP---GSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
+ PIC+ ++ L + V+GWGR+ G VLQ + VP+V C
Sbjct: 104 YVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFT 163
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
I++ CAGF GGRDSCQGDSGGP + +G FL GIISWG CA G+
Sbjct: 164 -----ITNNMFCAGFHEGGRDSCQGDSGGPHVTEV-EGTSFLTGIISWGEECAMKGKYGI 217
Query: 357 CTRISKFVPWVLDT 370
T++S++V W+ +
Sbjct: 218 YTKVSRYVNWIKEK 231
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 248 bits (636), Expect = 5e-81
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
L +I G + S + + + + ++H Y +D+AL++L+ P+E+
Sbjct: 48 GLPLQDVWRIYSGILELSDITKDT--PFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEY 105
Query: 238 APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
PI LP D I N VTGWG E G + +LQKV +P+V+NE+C+ +
Sbjct: 106 TEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDY 165
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
I+ +CAG+ GG+D+C+GDSGGPL K +G + L GI SWG GCA PGV
Sbjct: 166 ----KITQRMVCAGYKEGGKDACKGDSGGPLVCK-HNGMWRLVGITSWGEGCARREQPGV 220
Query: 357 CTRISKFVPWVLDT 370
T++++++ W+L+
Sbjct: 221 YTKVAEYMDWILEK 234
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 249 bits (637), Expect = 1e-80
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 16/204 (7%)
Query: 179 SLLTSQIKIRVGEYDFSKLEE---------PYPYQERGVVKKMVHPKYNFFTYE--YDLA 227
++ + K+R+GE++ + + P + G+ + + HP Y + + +D+A
Sbjct: 76 RVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIA 135
Query: 228 LVRLETPVEFAPNIVPICLP-GSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSN 286
L+RL VEF I P+CLP ++++ +G+ TV GWGR E G + QK+ VP+V
Sbjct: 136 LIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRT-ETGQYSTIKQKLAVPVVHA 194
Query: 287 EKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI 346
E+C F AG + +CAG + +DSC GDSGGPL + + ++FL G++S+G
Sbjct: 195 EQCAKTFGAAGVR--VRSSQLCAGGE-KAKDSCGGDSGGPLLAERANQQFFLEGLVSFGA 251
Query: 347 GCAEANLPGVCTRISKFVPWVLDT 370
C PG+ T++ K+ W+
Sbjct: 252 TCGTEGWPGIYTKVGKYRDWIEGN 275
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 247 bits (632), Expect = 1e-80
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
++ G +RG+ + +VH KY +++YD++L L +PV +
Sbjct: 45 TYKNPARWTASFGVTIKP------SKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPY 98
Query: 238 APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
+ +CLP + G+ VTG+G L G L++ V ++ C
Sbjct: 99 TNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYN 158
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
I+ +CAG G D+CQGDSGGPL ++LAGI+SWG CA+ N PGV
Sbjct: 159 DA---ITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGV 215
Query: 357 CTRISKFVPW 366
TR++ W
Sbjct: 216 YTRVTALRDW 225
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 244 bits (624), Expect = 2e-79
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT--YEYDLALVRLETP 234
V+ +L + I++ G + S Q V +H Y T Y D+A++ L T
Sbjct: 46 VDGVLPNNIRVIAGLWQQSDTS---GTQTANVDSYTMHENYGAGTASYSNDIAILHLATS 102
Query: 235 VEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMF 293
+ NI LP +++ G ++GWGR +LP +LQK ++P+++ +C +
Sbjct: 103 ISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAM 162
Query: 294 LRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISW----GIGCA 349
+ G I D +C G +C GDSGGPL DG + G+ SW G+G
Sbjct: 163 VGVGGAN-IWDNHICVQDPAGNTGACNGDSGGPLNC--PDGGTRVVGVTSWVVSSGLGAC 219
Query: 350 EANLPGVCTRISKFVPWV 367
+ P V TR+S ++ W+
Sbjct: 220 LPDYPSVYTRVSAYLGWI 237
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 244 bits (624), Expect = 3e-79
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 172 FSTESVNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNF---FTYEYDLAL 228
+ + + + + +G + +EE + + VHP Y + +E D+AL
Sbjct: 41 LYPKEHEAQSNASLDVFLGHTN---VEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIAL 97
Query: 229 VRLETPVEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNE 287
+ LE V PN++PICLP +D +G V+G+G + E L+ V +P+ + +
Sbjct: 98 LELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKI--AHDLRFVRLPVANPQ 155
Query: 288 KCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKD-GRYFLAGIISWGI 346
C + R + S CAG + +D+CQGDSGG V+ + R+ GI+SWGI
Sbjct: 156 ACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 215
Query: 347 GCAEANLPGVCTRISKFVPWVLDT 370
GC+ G T++ +V W+
Sbjct: 216 GCSRG--YGFYTKVLNYVDWIKKE 237
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 243 bits (623), Expect = 4e-79
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+++ G + S+++E GV + ++H +Y YD+AL++LET V +
Sbjct: 48 GVESPKILRVYSGILNQSEIKEDT--SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 105
Query: 238 APNIVPICLPGSDD-LLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
+ PI LP + +I + VTGWG + LQK +P+V+NE+C+ +
Sbjct: 106 TDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY--- 162
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
R I+ +CAG+ GG+D+C+GDSGGPL K + + L GI SWG GCA+ PGV
Sbjct: 163 -RGHKITHKMICAGYREGGKDACKGDSGGPLSCK-HNEVWHLVGITSWGEGCAQRERPGV 220
Query: 357 CTRISKFVPWVLDT 370
T + ++V W+L+
Sbjct: 221 YTNVVEYVDWILEK 234
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 244 bits (624), Expect = 4e-79
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 163 YSNNEKVDDFSTESVNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTY 222
+ D + + L S KI +G++ + +E Q GV +HP+Y+ T+
Sbjct: 44 LHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENE--QHLGVKHTTLHPQYDPNTF 101
Query: 223 EYDLALVRLETPVEFAPNIVPICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVP 282
E D+ALV L ++PICLP G V+GWG+ P L ++ +P
Sbjct: 102 ENDVALVELLESPVLNAFVMPICLP-EGPQQEGAMVIVSGWGKQFLQRF-PETLMEIEIP 159
Query: 283 IVSNEKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGK-DGRYFLAGI 341
IV + C+ + + ++ +CAG GG+D+C GDSGGP+ + G+++L G
Sbjct: 160 IVDHSTCQKAYAPLKKK--VTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGT 217
Query: 342 ISWGIGCAEANLPGVCTRISKFVPWVLDT 370
+SWG C + + GV + I W+
Sbjct: 218 VSWGDDCGKKDRYGVYSYIHHNKDWIQRV 246
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 240 bits (615), Expect = 6e-78
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT-YEYDLALVRLETPVE 236
S + IR+G Y + +H Y ++ D+AL++L V
Sbjct: 44 QKHDASALDIRMGTLKRLS----PHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVV 99
Query: 237 FAPNIVPICLPGSDD---LLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMF 293
NI PICLP + + + T +GWG + G L L V +PIV ++KC + +
Sbjct: 100 INSNITPICLPRKEAESFMRTDDIGTASGWGLT-QRGFLARNLMYVDIPIVDHQKCTAAY 158
Query: 294 LRAGRYEF-ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGK-DGRYFLAGIISWG-IGCAE 350
+ ++ +CAG ++GG+DSC+GDSGG L R+F+ GI+SWG + C E
Sbjct: 159 EKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGE 218
Query: 351 ANLPGVCTRISKFVPWVLDT 370
A GV T++ ++PW+ +
Sbjct: 219 AGQYGVYTKVINYIPWIENI 238
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 237 bits (608), Expect = 1e-76
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNF-FTYEYDLALVRLETPVE 236
+ + + +R+G++ ++ E + + K +HP+YN+ + D+AL++L+ PV
Sbjct: 52 KNFTENDLLVRIGKHSRTRYERN-IEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA 110
Query: 237 FAPNIVPICLPGSDD----LLIGENATVTGWGRLSE------GGSLPPVLQKVTVPIVSN 286
F+ I P+CLP + L G VTGWG L E G P VLQ V +PIV
Sbjct: 111 FSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVER 170
Query: 287 EKCRSMFLRAGRYEFISDIFMCAGF---DNGGRDSCQGDSGGPLQVKGK-DGRYFLAGII 342
C+ I+D CAG+ + D+C+GDSGGP +K + R++ GI+
Sbjct: 171 PVCKDST-----RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIV 225
Query: 343 SWGIGCAEANLPGVCTRISKFVPWVLDT 370
SWG GC G T + + W+
Sbjct: 226 SWGEGCDRDGKYGFYTHVFRLKKWIQKV 253
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 238 bits (608), Expect = 3e-76
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNF-FTYEYDLALVRLETPVE 236
+ + + +R+G++ ++ E + + K +HP+YN+ + D+AL++L+ PV
Sbjct: 82 KNFTENDLLVRIGKHSRTRYERN-IEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA 140
Query: 237 FAPNIVPICLPGSDD----LLIGENATVTGWGRLSE------GGSLPPVLQKVTVPIVSN 286
F+ I P+CLP + L G VTGWG L E G P VLQ V +PIV
Sbjct: 141 FSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVER 200
Query: 287 EKCRSMFLRAGRYEFISDIFMCAGF---DNGGRDSCQGDSGGPLQVKGK-DGRYFLAGII 342
C+ I+D CAG+ + D+C+GDSGGP +K + R++ GI+
Sbjct: 201 PVCKDST-----RIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIV 255
Query: 343 SWGIGCAEANLPGVCTRISKFVPWVLDT 370
SWG GC G T + + W+
Sbjct: 256 SWGEGCDRDGKYGFYTHVFRLKKWIQKV 283
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 236 bits (604), Expect = 3e-76
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
+ ++ +R+GEYD + E+ + + + VHP Y+ T + D+AL+ L P + I
Sbjct: 47 SKKLLVRLGEYDLRRWEKWE--LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTI 104
Query: 242 VPICLPGSD-----DLLIGENATVTGWGRLSEGG-----SLPPVLQKVTVPIVSNEKCRS 291
VPICLP S G+ VTGWG S + VL + +P+V + +C
Sbjct: 105 VPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSE 164
Query: 292 MFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEA 351
+ +S+ +CAG +D+C+GDSGGP+ G +FL G++SWG GC
Sbjct: 165 VMSNM-----VSENMLCAGILGDRQDACEGDSGGPMVASF-HGTWFLVGLVSWGEGCGLL 218
Query: 352 NLPGVCTRISKFVPWVLDT 370
+ GV T++S+++ W+
Sbjct: 219 HNYGVYTKVSRYLDWIHGH 237
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 236 bits (605), Expect = 9e-76
Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEE---PYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETP 234
+ ++ G + P QER V K ++H KY+ + D+AL+++ P
Sbjct: 51 IKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPP 110
Query: 235 VEFAPNIVPICLP--GSDDLLIGENATVTGWGRLSEGGSL-PPVLQKVTVPIVSNEKCRS 291
V I P CLP + + + V GWG L E P+LQ+ V ++ C S
Sbjct: 111 VTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNS 170
Query: 292 MFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVK-GKDGRYFLAGIISWGIGCAE 350
GR I +CAG+ G D+CQGDSGGPL K + Y + GI SWG+GCA
Sbjct: 171 TRWYNGR---IRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCAR 227
Query: 351 ANLPGVCTRISKFVPWVLDT 370
A PGV T ++ W+
Sbjct: 228 AKRPGVYTSTWSYLNWIASK 247
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 237 bits (606), Expect = 2e-75
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 172 FSTESVNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF---TYEYDLAL 228
+ + + + + +G + +EE + + VHP Y +E D+AL
Sbjct: 130 LYPKEHEAQSNASLDVFLGHTN---VEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIAL 186
Query: 229 VRLETPVEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNE 287
+ LE V PN++PICLP +D +G V+G+G + E + L+ V +P+ + +
Sbjct: 187 LELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK--IAHDLRFVRLPVANPQ 244
Query: 288 KCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVK-GKDGRYFLAGIISWGI 346
C + R + S CAG + +D+CQGDSGG V+ R+ GI+SWGI
Sbjct: 245 ACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 304
Query: 347 GCAEANLPGVCTRISKFVPWVLDT 370
GC+ G T++ +V W+
Sbjct: 305 GCSRG--YGFYTKVLNYVDWIKKE 326
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 234 bits (598), Expect = 2e-75
Identities = 61/194 (31%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYE--YDLALVRLETPVEFAP 239
+ ++ +GEYD S LE VHP +N D+ALV+L +
Sbjct: 48 SRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGD 107
Query: 240 NIVPICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGR 298
+ LP + D+L ++GWGRL GG LP LQ+ +P V E C
Sbjct: 108 KVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGIT 167
Query: 299 YEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISW--GIGCAEANLPGV 356
+ +CAG R C GDSGGPL DG + + G+ S+ GC P V
Sbjct: 168 ---VKKTMVCAGG--DTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTV 222
Query: 357 CTRISKFVPWVLDT 370
TR+S F+ W+ +T
Sbjct: 223 FTRVSAFIDWIDET 236
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 245 bits (627), Expect = 3e-75
Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 8/194 (4%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+++ G + S+++E GV + ++H +Y YD+AL++LET V +
Sbjct: 435 GVESPKILRVYSGILNQSEIKEDT--SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 492
Query: 238 APNIVPICLPGSDD-LLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
+ PICLP D +I + VTGWG + LQK +P+V+NE+C+ +
Sbjct: 493 TDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRY--- 549
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
R I+ +CAG+ GG+D+C+GDSGGPL K + + L GI SWG GCA+ PGV
Sbjct: 550 -RGHKITHKMICAGYREGGKDACKGDSGGPLSCK-HNEVWHLVGITSWGEGCAQRERPGV 607
Query: 357 CTRISKFVPWVLDT 370
T + ++V W+L+
Sbjct: 608 YTNVVEYVDWILEK 621
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 232 bits (594), Expect = 1e-74
Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+ ++++G + E + + + HP Y + D+AL++L P+ F
Sbjct: 45 SEHHKEAYEVKLGAHQLDSYSEDA--KVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITF 102
Query: 238 APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPP--VLQKVTVPIVSNEKCRSMFL 294
+ I PI LP + G + TVTGWG ++ SL LQ++ VP++S E C S++
Sbjct: 103 SRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYN 162
Query: 295 RAGRYE---FISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEA 351
+ E F+ + +CAG+ GG+D+CQGDSGGPL +G ++L GI+SWG C
Sbjct: 163 IDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCP-VEGLWYLTGIVSWGDACGAR 221
Query: 352 NLPGVCTRISKFVPWVLDT 370
N PGV T S + W+
Sbjct: 222 NRPGVYTLASSYASWIQSK 240
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 235 bits (602), Expect = 5e-74
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 172 FSTESVNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYN---FFTYEYDLAL 228
+ + + + + +G + +EE + + VHP Y + +E D+AL
Sbjct: 198 LYPKEHEAQSNASLDVFLGHTN---VEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIAL 254
Query: 229 VRLETPVEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNE 287
+ LE V PN++PICLP +D +G V+G+G + E L+ V +P+ + +
Sbjct: 255 LELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKI--AHDLRFVRLPVANPQ 312
Query: 288 KCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKD-GRYFLAGIISWGI 346
C + R + S CAG + +D+CQGDSGG V+ + R+ GI+SWGI
Sbjct: 313 ACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 372
Query: 347 GCAEANLPGVCTRISKFVPWVLDT 370
GC+ G T++ +V W+
Sbjct: 373 GCSRG--YGFYTKVLNYVDWIKKE 394
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 234 bits (599), Expect = 7e-74
Identities = 69/198 (34%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKY------NFFTYEYDLALVRLETPVE 236
S+ ++ G + + GV + H Y N D+ALV L +P+
Sbjct: 168 SRWRVFAGAVAQASPHG----LQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLP 223
Query: 237 FAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLR 295
I P+CLP + L G+ TVTGWG G VLQ+ VPI+SN+ C
Sbjct: 224 LTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFY 283
Query: 296 AGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKG---KDGRYFLAGIISWGIGCAEAN 352
+ I CAG+ GG D+CQGDSGGP + + R+ L GI+SWG GCA A
Sbjct: 284 GNQ---IKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQ 340
Query: 353 LPGVCTRISKFVPWVLDT 370
PGV T++S F W+
Sbjct: 341 KPGVYTKVSDFREWIFQA 358
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 230 bits (588), Expect = 1e-73
Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
T ++ +G+ + +E GV VH K+N F D+AL++L VE I
Sbjct: 63 TLTYRVALGKNNLEVEDEA-GSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTI 121
Query: 242 VPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYE 300
CLP LL VTGWGRL G + LQ+ P+V C
Sbjct: 122 QVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTT-- 179
Query: 301 FISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG--CAEANLPGVCT 358
+ + +CAG D G +C GDSGGPL + DG++ + GI+S+G G C P V T
Sbjct: 180 -VKETMVCAGGD-GVISACNGDSGGPLNCQ-ADGQWDVRGIVSFGSGLSCNTFKKPTVFT 236
Query: 359 RISKFVPWVLDT 370
R+S ++ W+
Sbjct: 237 RVSAYIDWINQK 248
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 235 bits (600), Expect = 1e-73
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT-YEYDLALVRLETPVE 236
S + IR+G + +H Y ++ D+AL++L V
Sbjct: 205 QKHDASALDIRMGTLKRLSPHY----TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVV 260
Query: 237 FAPNIVPICLPGSDD---LLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMF 293
NI PICLP + + + T +GWG + G L L V +PIV ++KC + +
Sbjct: 261 INSNITPICLPRKEAESFMRTDDIGTASGWGLT-QRGFLARNLMYVDIPIVDHQKCTAAY 319
Query: 294 LRAGRYEF-ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGK-DGRYFLAGIISWG-IGCAE 350
+ ++ +CAG ++GG+DSC+GDSGG L R+F+ GI+SWG + C E
Sbjct: 320 EKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGE 379
Query: 351 ANLPGVCTRISKFVPWVLDT 370
A GV T++ ++PW+ +
Sbjct: 380 AGQYGVYTKVINYIPWIENI 399
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 234 bits (598), Expect = 2e-73
Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPY----------PYQERGVVKKMVHPKYNFFTYEYDL 226
V+ L +IR+GE+ S E+ P G+ K ++H KY+ +D+
Sbjct: 165 VHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224
Query: 227 ALVRLETPVEFAPNIVPICLPGSDDL----LIGENATVTGWGRLSEGGSLPPVLQKVTVP 282
AL++L V F +I PICLP +D+L VTGWG E GS VL + VP
Sbjct: 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTT-ENGSSSDVLLQANVP 283
Query: 283 IVSNEKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGK-----DGRYF 337
+ C + RA + +C G +DSC+GDSGGPLQ + +
Sbjct: 284 LQPRSACSQAYRRA-----VPLSQLCVGGG-DLQDSCKGDSGGPLQAPAQYLGEYAPKMV 337
Query: 338 LAGIISWG-IGCAEANLPGVCTRISKFVPWVLDT 370
GI+S G + C + +LPG+ T + ++V W+ DT
Sbjct: 338 EFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDT 371
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 225 bits (577), Expect = 3e-72
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 15/200 (7%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+ + +++++ E Y Q V + +VHP++ D+AL+ LE PV
Sbjct: 49 DVKDLATLRVQLREQHLY-----YQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNI 103
Query: 238 APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPP--VLQKVTVPIVSNEKCRSMFL 294
+ + + LP + + G VTGWG + LPP L++V VPI+ N C + +
Sbjct: 104 SSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYH 163
Query: 295 RAGRY----EFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAE 350
I D +CAG N RDSCQGDSGGPL K +G + AG++SWG GCA+
Sbjct: 164 LGAYTGDDVRIIRDDMLCAG--NSQRDSCQGDSGGPLVCK-VNGTWLQAGVVSWGEGCAQ 220
Query: 351 ANLPGVCTRISKFVPWVLDT 370
N PG+ TR++ ++ W+
Sbjct: 221 PNRPGIYTRVTYYLDWIHHY 240
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 231 bits (591), Expect = 4e-72
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 21/208 (10%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF-TYEYDLALVRLETPVE 236
+ + + +R+G++ ++ E + + K +HP+YN+ + D+AL++L+ PV
Sbjct: 217 KNFTENDLLVRIGKHSRTRYERN-IEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVA 275
Query: 237 FAPNIVPICLPGSDD----LLIGENATVTGWGRLSE------GGSLPPVLQKVTVPIVSN 286
F+ I P+CLP + L G VTGWG L E G P VLQ V +PIV
Sbjct: 276 FSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVER 335
Query: 287 EKCRSMFLRAGRYEFISDIFMCAGF---DNGGRDSCQGDSGGPLQVKGK-DGRYFLAGII 342
C+ I+D CAG+ + D+C+GDSGGP +K + R++ GI+
Sbjct: 336 PVCKDSTRIR-----ITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIV 390
Query: 343 SWGIGCAEANLPGVCTRISKFVPWVLDT 370
SWG GC G T + + W+
Sbjct: 391 SWGEGCDRDGKYGFYTHVFRLKKWIQKV 418
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 224 bits (573), Expect = 1e-71
Identities = 41/197 (20%), Positives = 71/197 (36%), Gaps = 15/197 (7%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
V+ S I I G + + KK+ +Y+ T + + A++ E P++
Sbjct: 43 VDGTKPSDISIHYGSSYRTTK------GTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIK 96
Query: 237 F-APNIVPICLPGSD-DLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMF 293
I LP D + V+GWG + L + +V + C +
Sbjct: 97 LDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQY 156
Query: 294 LRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANL 353
+ ++I D CAG + GD+G P G L G+ S+ +
Sbjct: 157 KQIEADKYIYDGVFCAGGEYDETYIGYGDAGDPAVQNGT-----LVGVASYISSMP-SEF 210
Query: 354 PGVCTRISKFVPWVLDT 370
P V R+ +V + D
Sbjct: 211 PSVFLRVGYYVLDIKDI 227
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 222 bits (569), Expect = 3e-71
Identities = 71/193 (36%), Positives = 93/193 (48%), Gaps = 17/193 (8%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
V+ S +IR G + + VHP Y+ DLA+++L T +
Sbjct: 43 VSGYAQSGFQIRAGSLSRTS-----GGITSSLSSVRVHPSYS--GNNNDLAILKLSTSIP 95
Query: 237 FAPNIVPICLP-GSDDLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMFL 294
NI L D + G +ATV GWG SEGG S P L KVTVPIVS CR+ +
Sbjct: 96 SGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQY- 154
Query: 295 RAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLP 354
I++ CAG +GG+DSCQGDSGGP+ V D L G +SWG GCA N
Sbjct: 155 ---GTSAITNQMFCAGVSSGGKDSCQGDSGGPI-V---DSSNTLIGAVSWGNGCARPNYS 207
Query: 355 GVCTRISKFVPWV 367
GV + ++
Sbjct: 208 GVYASVGALRSFI 220
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 223 bits (570), Expect = 4e-71
Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 12/191 (6%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
T+ + GE+D E Q+ + K + KYN T D+ L++L T F+ +
Sbjct: 61 TTSDVVVAGEFDQGSSSEKI--QKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTV 118
Query: 242 VPICLPGSDDLL-IGENATVTGWGRLS-EGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRY 299
+CLP + D G TGWG + P LQ+ ++P++SN C+ +
Sbjct: 119 SAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTK--- 175
Query: 300 EFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTR 359
I D +CAG G SC GDSGGPL K K+G + L GI+SWG + PGV R
Sbjct: 176 --IKDAMICAG--ASGVSSCMGDSGGPLVCK-KNGAWTLVGIVSWGSSTCSTSTPGVYAR 230
Query: 360 ISKFVPWVLDT 370
++ V WV T
Sbjct: 231 VTALVNWVQQT 241
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 220 bits (563), Expect = 4e-70
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF-TYEYDLALVRLETP-- 234
+S + + +G++ F++ + Q G+ K + + Y+ F ++DL L+RL+
Sbjct: 44 HSPPRDSVSVVLGQHFFNRTTDVT--QTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGD 101
Query: 235 --VEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPP-VLQKVTVPIVSNEKCR 290
+ + PICLP G + GWG L E S L++ VP+V++ KC
Sbjct: 102 RCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCS 161
Query: 291 SMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAE 350
S + IS +CAG+ + D+CQGDSGGPL K+G +L GIISWG GC
Sbjct: 162 SPEVYGAD---ISPNMLCAGYFDCKSDACQGDSGGPL-ACEKNGVAYLYGIISWGDGCGR 217
Query: 351 ANLPGVCTRISKFVPWVLDT 370
+ PGV TR++ +V W+ D
Sbjct: 218 LHKPGVYTRVANYVDWINDR 237
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 219 bits (561), Expect = 5e-70
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+++K+ VG S+ V +V+ Y+ F D+ALV L P++F +
Sbjct: 50 NRLKVHVGTNYLSE-----SGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQ 104
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFI 302
PI L +D+ L T+TGWG GG+ P LQ++ + + ++C R +
Sbjct: 105 PIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR------V 158
Query: 303 SDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRISK 362
D +C G +C GDSGGPL G GI+S+G CA P V TR+S
Sbjct: 159 IDSHICTLTK-RGEGACHGDSGGPLVANGA-----QIGIVSFGSPCALGE-PDVYTRVSS 211
Query: 363 FVPWVLDT 370
FV W+
Sbjct: 212 FVSWINAN 219
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 219 bits (560), Expect = 1e-69
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYN--FFTYEYDLALVRLETPVEFAP 239
+ ++ +G + S E V K +VH +N + D+AL++L +PV
Sbjct: 50 SRTYRVVLGRHSLSTNEPGS--LAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTD 107
Query: 240 NIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGR 298
I CLP + +L VTGWGRL G+ P +LQ+ + +V C
Sbjct: 108 KIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGST 167
Query: 299 YEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG--IGCAEANLPGV 356
+ +CAG D G SC GDSGGPL +G +G++ + GI+S+G +GC + P V
Sbjct: 168 ---VKTNMICAGGD-GIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSV 223
Query: 357 CTRISKFVPWVLDT 370
TR+S ++ W+
Sbjct: 224 FTRVSNYIDWINSV 237
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 219 bits (561), Expect = 1e-69
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETP--- 234
+ + +G E Q+ V K +VH +++ TY+ D+AL++L++
Sbjct: 51 ERFPPHHLTVILGRTYRVVPGEEE--QKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108
Query: 235 -VEFAPNIVPICLP-GSDDLLIGENATVTGWGRLSEGGSLPP-VLQKVTVPIVSNEKCRS 291
+ + + +CLP L ++G+G+ L++ V + + +C S
Sbjct: 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTS 168
Query: 292 MFLRAGRYEFISDIFMCAGFDNGG------RDSCQGDSGGPLQVKGKDGRYFLAGIISWG 345
L ++D +CAG G D+CQGDSGGPL DGR L GIISWG
Sbjct: 169 QHLLNRT---VTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCL-NDGRMTLVGIISWG 224
Query: 346 IGCAEANLPGVCTRISKFVPWVLDT 370
+GC + ++PGV T+++ ++ W+ D
Sbjct: 225 LGCGQKDVPGVYTKVTNYLDWIRDN 249
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 218 bits (557), Expect = 2e-69
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 13/188 (6%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
S++++R+GE++ E Q + + HP Y+ + + D+ L++L P +
Sbjct: 44 SRVEVRLGEHNIKVTEGSE--QFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQ 101
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFI 302
P+ LP + G TV+GWG + LQ + +PI+S C + + I
Sbjct: 102 PVALP-TSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSY-----PGMI 155
Query: 303 SDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRISK 362
++ CAG+ GG+DSCQGDSGGP+ G+ L G++SWG GCAE PGV ++
Sbjct: 156 TNAMFCAGYLEGGKDSCQGDSGGPVVCNGE-----LQGVVSWGYGCAEPGNPGVYAKVCI 210
Query: 363 FVPWVLDT 370
F W+ T
Sbjct: 211 FNDWLTST 218
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 220 bits (562), Expect = 2e-69
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF-TYEYDLALVRLETP-- 234
+S + + +G++ F++ + Q G+ K + + Y+ F ++DL L+RL+
Sbjct: 79 HSPPRDSVSVVLGQHFFNRTTDVT--QTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGD 136
Query: 235 --VEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPP-VLQKVTVPIVSNEKCR 290
+ + PICLP G + GWG L E S L++ VP+V++ KC
Sbjct: 137 RCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCS 196
Query: 291 SMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAE 350
S + IS +CAG+ + D+CQGDSGGPL K+G +L GIISWG GC
Sbjct: 197 SPEVYGAD---ISPNMLCAGYFDCKSDACQGDSGGPL-ACEKNGVAYLYGIISWGDGCGR 252
Query: 351 ANLPGVCTRISKFVPWVLDT 370
+ PGV TR++ +V W+ D
Sbjct: 253 LHKPGVYTRVANYVDWINDR 272
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 217 bits (554), Expect = 6e-69
Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 16/191 (8%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
+ K+RVG+ + + E V + H ++ TY++D+A++RL+TP+ F N+
Sbjct: 47 AKRFKVRVGDRNTEQEEGGE--AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNV 104
Query: 242 VPICLPGSDDLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMFLRAGRYE 300
P LP + G ++GWG + G P LQ + P++S KC + Y
Sbjct: 105 APASLP-TAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEAS------YP 157
Query: 301 F-ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTR 359
I+ C GF GG+DSCQGDSGGP+ G+ L G++SWG GCA+ N PGV T+
Sbjct: 158 GKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQ-----LQGVVSWGDGCAQKNKPGVYTK 212
Query: 360 ISKFVPWVLDT 370
+ +V W+ +T
Sbjct: 213 VYNYVKWIKNT 223
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 217 bits (555), Expect = 7e-69
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT--YEYDLALVRLETP- 234
+ + +G + + + V ++H Y+ T + D+AL+++ +
Sbjct: 50 DYPKKEDYIVYLGRSRLNSNTQGE--MKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107
Query: 235 ---VEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPP-VLQKVTVPIVSNEKC 289
+ + I I LP + G + +TG+G+ + L P L+ V ++S+ +C
Sbjct: 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHREC 167
Query: 290 RSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCA 349
+ ++ +CA DSCQGDSGGPL GR L GI+SWG GCA
Sbjct: 168 QQPHYYGSE---VTTKMLCAADPQWKTDSCQGDSGGPLVCS-LQGRMTLTGIVSWGRGCA 223
Query: 350 EANLPGVCTRISKFVPWVLDT 370
+ PGV TR+S F+PW+
Sbjct: 224 LKDKPGVYTRVSHFLPWIRSH 244
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 215 bits (550), Expect = 2e-68
Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 18/196 (9%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
V I I+ + + + V + Y T E D+A++ L P++
Sbjct: 45 VFDQKPETIVIQYESTNLWEDPG----KSDPYVSHVYLSFYRQETMENDIAILELSRPLK 100
Query: 237 F-APNIVPICLP-GSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFL 294
P LP G + V+G+G L+ + +V ++CR+ +
Sbjct: 101 LDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKY- 159
Query: 295 RAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLP 354
F+S CA G GD+G P + L G+ ++ E P
Sbjct: 160 ---GPIFLSLQVFCAQ--KVGVSLESGDAGDPTVQQDT-----LVGVAAYFPKRPE-GAP 208
Query: 355 GVCTRISKFVPWVLDT 370
V T++ +V W+ D
Sbjct: 209 EVFTKVGSYVSWIQDI 224
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 215 bits (550), Expect = 4e-68
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 12/194 (6%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYN--FFTYEYDLALVRLETPVEFAP 239
++ VGE++ ++ Q GV K +VHP +N YD+AL+RL V
Sbjct: 50 ELTFRVVVGEHNLNQNNGTE--QYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNS 107
Query: 240 NIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGR 298
+ LP + +L +TGWG G L LQ+ +P V C S
Sbjct: 108 YVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGST 167
Query: 299 YEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG--IGCAEANLPGV 356
+ + +CAG D G R CQGDSGGPL +G+Y + G+ S+ +GC P V
Sbjct: 168 ---VKNSMVCAGGD-GVRSGCQGDSGGPLHCL-VNGQYAVHGVTSFVSRLGCNVTRKPTV 222
Query: 357 CTRISKFVPWVLDT 370
TR+S ++ W+ +
Sbjct: 223 FTRVSAYISWINNV 236
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 216 bits (551), Expect = 6e-68
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT--YEYDLALVRLETP- 234
+ + +G + + + V ++H Y+ T + D+AL+++ +
Sbjct: 73 DYPKKEDYIVYLGRSRLNSNTQGE--MKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130
Query: 235 ---VEFAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPP-VLQKVTVPIVSNEKC 289
+ + I ICLP + G + +TG+G+ + L P L+ V ++S+ +C
Sbjct: 131 GRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHREC 190
Query: 290 RSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCA 349
+ ++ +CA DSCQGDSGGPL GR L GI+SWG GCA
Sbjct: 191 QQPHYYGSE---VTTKMLCAADPQWKTDSCQGDSGGPLVCS-LQGRMTLTGIVSWGRGCA 246
Query: 350 EANLPGVCTRISKFVPWVLDT 370
+ PGV TR+S F+PW+
Sbjct: 247 LKDKPGVYTRVSHFLPWIRSH 267
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 213 bits (545), Expect = 1e-67
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 16/190 (8%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
S I++R+GE + + +E Q K +VHP YN T D+ L++L++ +
Sbjct: 44 SGIQVRLGEDNINVVEGNE--QFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVA 101
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
I LP + G ++GWG G S P VL+ + PI+S+ C+S Y
Sbjct: 102 SISLP-TSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSA------YPG 154
Query: 302 -ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRI 360
I+ CAG+ GG+DSCQGDSGGP+ GK L GI+SWG GCA+ N PGV T++
Sbjct: 155 QITSNMFCAGYLEGGKDSCQGDSGGPVVCSGK-----LQGIVSWGSGCAQKNKPGVYTKV 209
Query: 361 SKFVPWVLDT 370
+V W+ T
Sbjct: 210 CNYVSWIKQT 219
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 213 bits (545), Expect = 2e-67
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+ +G + SK E Q + K + + D+ LV+L+T +
Sbjct: 47 RFTKGQSPTVVLGAHSLSKNEASK--QTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKL 104
Query: 238 APNIVPICLPGSDDLLIGENATVTGWGRLSEGGSLPP-VLQKVTVPIVSNEKCRSMFLRA 296
++ + + L G VTGWG P L++VTV ++S + C S
Sbjct: 105 NKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYN 164
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
G FI+ +CAG G +DSC+GD+GGPL KG I+S G C A PG+
Sbjct: 165 GDP-FITKDMVCAGDAKGQKDSCKGDAGGPLICKG-----VFHAIVSGGHECGVATKPGI 218
Query: 357 CTRIS-KFVPWVLDT 370
T ++ K+ W+
Sbjct: 219 YTLLTKKYQTWIKSN 233
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 222 bits (567), Expect = 4e-67
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
+ + T + +I D+ + V + + H YN TY+ D+AL+ ++
Sbjct: 364 LRASKTHRYQIWTTVVDWIHPDLK-RIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGN 422
Query: 237 F----APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRS 291
P +P C+P S L + V+GWGR + LQ V ++SN C
Sbjct: 423 KKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNER-VFSLQWGEVKLISN--CSK 479
Query: 292 MFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEA 351
+ F CAG +G D+C+GDSGGPL + ++ G++SWG C +
Sbjct: 480 FY----GNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKP 535
Query: 352 NLPGVCTRISKFVPW 366
PGV T+++ + W
Sbjct: 536 EFPGVYTKVANYFDW 550
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 212 bits (542), Expect = 6e-67
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
S S K+ +G + LE QE V + + P D+AL++L +P
Sbjct: 63 KSPRPSSYKVILGAHQEVNLEPHV--QEIEVSRLFLEPTRK------DIALLKLSSPAVI 114
Query: 238 APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
++P CLP + ++ +TGWG +L++ +P++ N+ C
Sbjct: 115 TDKVIPACLPSPNYVVADRTECFITGWGETQGTFG-AGLLKEAQLPVIENKVCNRYEFLN 173
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
GR + +CAG GG DSCQGD+GGPL V + +Y L G+ SWG+GCA N PGV
Sbjct: 174 GR---VQSTELCAGHLAGGTDSCQGDAGGPL-VCFEKDKYILQGVTSWGLGCARPNKPGV 229
Query: 357 CTRISKFVPWVLDT 370
R+S+FV W+
Sbjct: 230 YVRVSRFVTWIEGV 243
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 212 bits (541), Expect = 7e-67
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 13/194 (6%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYE--YDLALVRLETPVEFAP 239
++ +GE++ + E Q V +H +N YD+AL+RL T
Sbjct: 50 ARTWRVVLGEHNLNTNEGKE--QIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNS 107
Query: 240 NIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGR 298
+ LP S+ +L +TGWG+ S GG L L++ +P V + C S
Sbjct: 108 AVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGST 167
Query: 299 YEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISW--GIGCAEANLPGV 356
+ +CAG G C GDSGGPL + +G Y++ G+ S+ GC + P V
Sbjct: 168 ---VKTTMVCAG--GGANSGCNGDSGGPLNCQ-VNGSYYVHGVTSFVSSSGCNASKKPTV 221
Query: 357 CTRISKFVPWVLDT 370
TR+S ++ W+
Sbjct: 222 FTRVSAYISWMNGI 235
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 215 bits (548), Expect = 8e-67
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 22/205 (10%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF-------TYEYDLALVRLETP 234
+ + VG + +HP + ++ D+ALVRL+ P
Sbjct: 125 NREPTMYVGSTSVQTSRLA-KSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDP 183
Query: 235 VEFAPNIVPICLPGSDD---LLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRS 291
V+ P + PICLPG+ L+ G+ ++GWGR + L+ +P+ KC+
Sbjct: 184 VKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDR-AVRLKAARLPVAPLRKCKE 242
Query: 292 MFLRAGRYEF----ISDIFMCAGFDNGGRDSCQGDSGGPL--QVKGKDGRYFLAGIISWG 345
+ + + + +CAG + G DSC+GDSGG Q +++ AG++SWG
Sbjct: 243 VKVEKPTADAEAYVFTPNMICAGGE-KGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWG 301
Query: 346 IGCAEANLPGVCTRISKFVPWVLDT 370
C G+ TR+ +V W++ T
Sbjct: 302 PQCGT---YGLYTRVKNYVDWIMKT 323
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 211 bits (539), Expect = 1e-66
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
+ ++++ +G + S+ E + V++ + HP T ++DL L++L
Sbjct: 43 LEDAADGKVQVLLGAHSLSQPEPSK--RLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKAT 100
Query: 237 FAPNIVPICLP-GSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLR 295
P + P+ D+ G V GWG ++ G P LQ V +P++ C
Sbjct: 101 LGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHH 160
Query: 296 AGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CAEANLP 354
G I++ MCA + RDSC+GD+GGPL G L G+++ G C P
Sbjct: 161 DGA---ITERLMCAE--SNRRDSCKGDAGGPLVCGG-----VLEGVVTSGSRVCGNRKKP 210
Query: 355 GVCTRISKFVPWVLDT 370
G+ TR++ + W+
Sbjct: 211 GIYTRVASYAAWIDSV 226
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 211 bits (539), Expect = 1e-66
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYN-FFTYEYDLALVRLETPVEFAPN 240
+Q+++ +G + P + + HP+Y E DLAL++L+ V+ +
Sbjct: 47 MAQLRLVLGLHTLDS-----PGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRT 101
Query: 241 IVPICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRY 299
I P+ LP ++ G ++ GWG +GG L VL+++ + ++ C + G
Sbjct: 102 IRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGS- 160
Query: 300 EFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CAEANLPGVCT 358
+S +C D+ + C+GDSGGPL LAG++S+ C + P V T
Sbjct: 161 --LSPSMVCLAADSKDQAPCKGDSGGPLVCG---KGRVLAGVLSFSSRVCTDIFKPPVAT 215
Query: 359 RISKFVPWVLDT 370
++ +V W+
Sbjct: 216 AVAPYVSWIRKV 227
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 209 bits (534), Expect = 6e-66
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
S I + +G ++ + E Q V + + HP YN + D+ L++LE + +
Sbjct: 48 SSINVTLGAHNIKEQEPTQ--QFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQ 105
Query: 243 PICLP-GSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
P+ LP + G+ +V GWG+ + G LQ+V + + + KC S R+ +
Sbjct: 106 PLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDL----RHYY 161
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRIS 361
S I +C G + S +GDSGGPL GI+S+G P CT++S
Sbjct: 162 DSTIELCVGDPEIKKTSFKGDSGGPLVCNK-----VAQGIVSYGRNNGMP--PRACTKVS 214
Query: 362 KFVPWVLDT 370
FV W+ T
Sbjct: 215 SFVHWIKKT 223
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 207 bits (529), Expect = 4e-65
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 12/195 (6%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
S + +G +D + Q V + + P+ + DL L++L P
Sbjct: 42 FPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGS------DLVLMKLARPAV 95
Query: 237 FAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLR 295
+ I LP + + +V GWG +L+ + I+ NEKC
Sbjct: 96 LDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINY-DGLLRVAHLYIMGNEKCSQHHRG 154
Query: 296 AGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPG 355
+++ +CAG + G C+GD GGPL V + + G+I G GCA N PG
Sbjct: 155 KVT---LNESEICAGAEKIGSGPCEGDYGGPL-VCEQHKMRMVLGVIVPGRGCAIPNRPG 210
Query: 356 VCTRISKFVPWVLDT 370
+ R++ + W+
Sbjct: 211 IFVRVAYYAKWIHKI 225
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 206 bits (526), Expect = 7e-65
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
++ + +G Q K HP Y+ T+ DL LV+L + + +
Sbjct: 45 NEYTVHLGSDTLGDRRA----QRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVK 100
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
+ LP + G TV+GWG + + P L V V ++S + C ++ +
Sbjct: 101 KVRLPSRCEPP-GTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVY-----KDL 154
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG-IGCAEANLPGVCTRI 360
+ + +CAG + +++C GDSGGPL +G L G++SWG C + N PGV T++
Sbjct: 155 LENSMLCAGIPDSKKNACNGDSGGPLVCRG-----TLQGLVSWGTFPCGQPNDPGVYTQV 209
Query: 361 SKFVPWVLDT 370
KF W+ DT
Sbjct: 210 CKFTKWINDT 219
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 206 bits (527), Expect = 9e-65
Identities = 47/194 (24%), Positives = 75/194 (38%), Gaps = 14/194 (7%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
+ + ++ +G + Q V K + P + L L++LE V
Sbjct: 44 CHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGS------QLVLLKLERSVTL 97
Query: 238 APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
+ ICLP ++ G + GWG G+ VL + ++SN++C
Sbjct: 98 NQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGN-DTVLNVALLNVISNQECNIKHRGR 156
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
+ + MC +C+GD GGPL + L GII CA + P V
Sbjct: 157 -----VRESEMCTEGLLAPVGACEGDYGGPL-ACFTHNSWVLEGIIIPNRVCARSRWPAV 210
Query: 357 CTRISKFVPWVLDT 370
TR+S FV W+
Sbjct: 211 FTRVSVFVDWIHKV 224
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 205 bits (524), Expect = 2e-64
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
++I +G ++ L + + K N ++ D+ L+RL PV + +I
Sbjct: 44 GNMRIYLGMHNLKVLNKD-ALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIA 102
Query: 243 PICLPGSDDLLIGENATVTGWGRLSE-GGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
P+ LP S+ +G + GWG ++ +LP V + I+ C++ Y+
Sbjct: 103 PLSLP-SNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAA------YKG 155
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI-GCAEANLPGVCTRI 360
++ +CAG GG+D+C+GDSGGPL G+ GI+S G CA+ PG+ T++
Sbjct: 156 LAATTLCAGILEGGKDTCKGDSGGPLICNGQ-----FQGILSVGGNPCAQPRKPGIYTKV 210
Query: 361 SKFVPWVLDT 370
+ W+
Sbjct: 211 FDYTDWIQSI 220
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 205 bits (524), Expect = 3e-64
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMV-HPKYNFFTYEYDLALVRLETPVEFAPNI 241
+I++G + E Q R +K N+ ++ D+ L+RL++PV+ + +I
Sbjct: 47 KNFRIKLGMHSKKVPNEDE--QTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHI 104
Query: 242 VPICLPGSDDLLIGENATVTGWGRLSE-GGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYE 300
P LP S +G + GWGR+S G+ P V V + ++ E CR+ +
Sbjct: 105 APFSLP-SSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPY--PEFEL 161
Query: 301 FISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CAEANLPGVCTR 359
+ +CAG GG+D+C+GDSGGPL G+ GI SWG CA+ + P T+
Sbjct: 162 PATSRTLCAGILEGGKDTCKGDSGGPLICNGQ-----FQGIASWGDDPCAQPHKPAAYTK 216
Query: 360 ISKFVPWVLDT 370
+ + W+ +
Sbjct: 217 VFDHLDWIENI 227
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 204 bits (521), Expect = 4e-64
Identities = 44/202 (21%), Positives = 73/202 (36%), Gaps = 24/202 (11%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
S + +G YD + E ++ + M Y+ DL L++L+
Sbjct: 43 FQSQNPGVSTVVLGAYDLRRRERQS--RQTFSISSMSENGYDPQQNLNDLMLLQLDREAN 100
Query: 237 FAPNIVPICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRS-MFL 294
++ + LP + + G V GWG GG L + V V + ++CR
Sbjct: 101 LTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNN-- 158
Query: 295 RAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLP 354
+C G C GD G PL +G G+ S+ +G P
Sbjct: 159 ------------VCTGVLTRRGGICNGDGGTPLVCEG-----LAHGVASFSLGPC-GRGP 200
Query: 355 GVCTRISKFVPWVLDTGDSGGP 376
TR++ F W+ ++ GP
Sbjct: 201 DFFTRVALFRDWIDGVLNNPGP 222
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 204 bits (521), Expect = 6e-64
Identities = 63/190 (33%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
++R+G Y S + E Q VK + HP Y+ + DL L++L + ++
Sbjct: 46 KVFRVRLGHYSLSPVYES-GQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVR 104
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
PI + S G V+GWG P VLQ + + ++S ++C +
Sbjct: 105 PINVS-SHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAY-----PRQ 158
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG-IGCAEANLPGVCTRI 360
I D CAG GRDSCQGDSGGP+ G L G++SWG CA N PGV T +
Sbjct: 159 IDDTMFCAGDK-AGRDSCQGDSGGPVVCNGS-----LQGLVSWGDYPCARPNRPGVYTNL 212
Query: 361 SKFVPWVLDT 370
KF W+ +T
Sbjct: 213 CKFTKWIQET 222
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 203 bits (518), Expect = 1e-63
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
S I + +G ++ + E Q V + + HP YN T D+ L++L + +
Sbjct: 48 SSINVTLGAHNIMERERTQ--QVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVS 105
Query: 243 PICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
PI LP S + G +V GWGRL LQ+V + + S EKC + F +
Sbjct: 106 PINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARF-----KNY 160
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRIS 361
I +CAG + ++S GDSGGPL G GI+S+G P V TRIS
Sbjct: 161 IPFTQICAGDPSKRKNSFSGDSGGPLVCNGV-----AQGIVSYGRND--GTTPDVYTRIS 213
Query: 362 KFVPWVLDT 370
F+ W+ T
Sbjct: 214 SFLSWIHST 222
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 203 bits (518), Expect = 1e-63
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+++ +G+++ + E ++ VV+ ++HP Y+ +++ D+ L+RL P + + I
Sbjct: 45 PNLQVFLGKHNLRQRESSQ--EQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQ 102
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFI 302
P+ L D + + GWG+ ++ G P +Q + +VS E+C + I
Sbjct: 103 PLPLE-RDCSANTTSCHILGWGKTAD-GDFPDTIQCAYIHLVSREECEHAY-----PGQI 155
Query: 303 SDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG-IGCAEANLPGVCTRIS 361
+ +CAG + G+DSCQGDSGGPL L G++SWG I C PGV T +
Sbjct: 156 TQNMLCAGDEKYGKDSCQGDSGGPLVCGD-----HLRGLVSWGNIPCGSKEKPGVYTNVC 210
Query: 362 KFVPWVLDT 370
++ W+ T
Sbjct: 211 RYTNWIQKT 219
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 203 bits (518), Expect = 2e-63
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+ ++ +G + ++ E Q V K+ +P Y+ T E DL L++L + +
Sbjct: 46 KRSQVILGAHSITREEPTK--QIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVT 103
Query: 243 PICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
+ LP D + G V GWGR S L++V + I+ + C
Sbjct: 104 ILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPV- 162
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI--GCAEANLPGVCTR 359
I +CAG GGRDSC GDSG PL +G G+ S+G+ C + PGV
Sbjct: 163 IGMNMVCAGSLRGGRDSCNGDSGSPLLCEG-----VFRGVTSFGLENKCGDPRGPGVYIL 217
Query: 360 IS-KFVPWVLDT 370
+S K + W++ T
Sbjct: 218 LSKKHLNWIIMT 229
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 202 bits (516), Expect = 2e-63
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 24/196 (12%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
V ++ +++ +G ++ S+ E P ++ V+++ Y+ D+ +++L
Sbjct: 43 VANVNVRAVRVVLGAHNLSRRE---PTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSAT 99
Query: 237 FAPNIVPICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLR 295
N+ LP L G GWG L + VLQ++ V +V++ RS
Sbjct: 100 INANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVTSLCRRSN--- 156
Query: 296 AGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG-IGCAEANLP 354
+C C GDSG PL G + GI S+ GCA P
Sbjct: 157 -----------VCTLVRGRQAGVCFGDSGSPLVCNG-----LIHGIASFVRGGCASGLYP 200
Query: 355 GVCTRISKFVPWVLDT 370
+++FV W+
Sbjct: 201 DAFAPVAQFVNWIDSI 216
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 202 bits (516), Expect = 3e-63
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 16/189 (8%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+I + +G +D K E Q+ V K+++H YN +D+ L++LE VE P +
Sbjct: 49 REITVILGAHDVRKRESTQ--QKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVN 106
Query: 243 PICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
+ LP D + G GWG+ L++V + I+ + C +
Sbjct: 107 VVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVD------YRYY 160
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRIS 361
+C G R + GDSGGPL G GI+S+G A P + TR+S
Sbjct: 161 EYKFQVCVGSPTTLRAAFMGDSGGPLLCAG-----VAHGIVSYGHPD--AKPPAIFTRVS 213
Query: 362 KFVPWVLDT 370
+VPW+
Sbjct: 214 TYVPWINAV 222
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 202 bits (516), Expect = 3e-63
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKM-VHPKYNFFTYEYDLALVRLETPVEFAPNI 241
I+I++G + + E Q R K + D+ L+RL PV ++ +I
Sbjct: 47 RNIRIKLGMHSKNIRNEDE--QIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHI 104
Query: 242 VPICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
P+ LP S +G + GWG++S + P V + IV ++ C ++ +
Sbjct: 105 APVSLP-SRSRGVGSRCRIMGWGKIST-TTYPDVPHCTNIFIVKHKWCEPLY----PWVP 158
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI-GCAEANLPGVCTRI 360
+CAG GGRD+C GDSGGPL G+ + GI++ G C + P V T++
Sbjct: 159 ADSRTLCAGILKGGRDTCHGDSGGPLICNGE-----MHGIVAGGSEPCGQHLKPAVYTKV 213
Query: 361 SKFVPWVLDT 370
+ W+
Sbjct: 214 FDYNNWIQSI 223
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 202 bits (516), Expect = 3e-63
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHP-KYNFFTYEYDLALVRLETPVEFAPNI 241
+ ++++G + L E Q R +K + P K N + D+ L++L++ V + +I
Sbjct: 45 TNFQMKLGVHSKKVLNEDE--QTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHI 102
Query: 242 VPICLPGSDDLLIGENATVTGWGRLSE-GGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYE 300
VP+ LP S +G + GWG ++ + P V + ++ + C++ + E
Sbjct: 103 VPLSLP-SSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGY-----PE 156
Query: 301 FISDIFM-CAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI-GCAEANLPGVCT 358
+++ CAG GG+D+C GDSGGPL G+ GI+S+G C + PGV T
Sbjct: 157 LLTEYRTLCAGILEGGKDTCGGDSGGPLICNGQ-----FQGIVSFGAHPCGQGLKPGVYT 211
Query: 359 RISKFVPWVLDT 370
++ + W+
Sbjct: 212 KVFDYNHWIQSI 223
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 201 bits (514), Expect = 6e-63
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+ + +G ++ EE Q V K + HP YN D+ L++L + +
Sbjct: 49 RSMTVTLGAHNIKAKEETQ--QIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVR 106
Query: 243 PICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
P+ LP + + G+ V GWG+++ G P L +V + + ++ C S F + +
Sbjct: 107 PLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQF----QSSY 162
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRIS 361
+C G S + DSGGPL K AGI+S+G + P V TR+
Sbjct: 163 NRANEICVGDSKIKGASFEEDSGGPLVCKRA-----AAGIVSYGQTD--GSAPQVFTRVL 215
Query: 362 KFVPWVLDT 370
FV W+ T
Sbjct: 216 SFVSWIKKT 224
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 200 bits (512), Expect = 1e-62
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+ I +G + +EP Q + HP+YN DL L++L+ V + I
Sbjct: 45 NSYTIGLGLHSLEADQEPGS-QMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIR 103
Query: 243 PICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFI 302
I + S G + V+GWG L+ G +P VLQ V V +VS E C ++
Sbjct: 104 SISIA-SQCPTAGNSCLVSGWGLLA-NGRMPTVLQCVNVSVVSEEVCSKLY-----DPLY 156
Query: 303 SDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CAEANLPGVCTRIS 361
CAG +DSC GDSGGPL G +L G++S+G C + +PGV T +
Sbjct: 157 HPSMFCAGGGQDQKDSCNGDSGGPLICNG-----YLQGLVSFGKAPCGQVGVPGVYTNLC 211
Query: 362 KFVPWVLDT 370
KF W+ T
Sbjct: 212 KFTEWIEKT 220
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 200 bits (510), Expect = 2e-62
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Query: 181 LTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPN 240
I + +G ++ ++ E+ + Q+ V+K+ HPKYN T +D+ L++L+
Sbjct: 47 AGRSITVTLGAHNITEEEDTW--QKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLA 104
Query: 241 IVPICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRY 299
+ + P + + G V GWGR LQ+V + ++ + C
Sbjct: 105 VGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSH------FR 158
Query: 300 EFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTR 359
+F ++ +C G + + +GDSGGPL G GI+S+G A P V TR
Sbjct: 159 DFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGV-----AQGIVSYGRSD--AKPPAVFTR 211
Query: 360 ISKFVPWVLDT 370
IS + PW+
Sbjct: 212 ISHYRPWINQI 222
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 200 bits (510), Expect = 2e-62
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 17/191 (8%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
+ + +G ++ + E VH YN F D+A++RL PV I
Sbjct: 46 AGFVDVVLGAHNIREDEATQ--VTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAI 103
Query: 242 VPICLPGSDDLLIGENATVTGWGRLSEGG-SLPPVLQKVTVPIVSNEKCRSMFLRAGRYE 300
+ LP S D+ +G T TGWG S+ + VL++V VPI+SN C + Y
Sbjct: 104 ATVGLP-STDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDA------VYG 156
Query: 301 FISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CAEANLPGVCTR 359
++D +C GG+ +C GDSGGPL G GI S+G EA P TR
Sbjct: 157 IVTDGNICIDST-GGKGTCNGDSGGPLNYNGL-----TYGITSFGAAAGCEAGYPDAFTR 210
Query: 360 ISKFVPWVLDT 370
++ F+ W+
Sbjct: 211 VTYFLDWIQTQ 221
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 197 bits (504), Expect = 2e-61
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 16/189 (8%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
S I + +G ++ + E Q + + HP+YN T + D+ L++L V N+
Sbjct: 48 SNINVTLGAHNIQRRENTQ--QHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVN 105
Query: 243 PICLPGSDDLLI-GENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEF 301
P+ LP + + L G TV GWGR+S L++V + + + +C +F +
Sbjct: 106 PVALPRAQEGLRPGTLCTVAGWGRVSMRRG-TDTLREVQLRVQRDRQCLRIF-----GSY 159
Query: 302 ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCTRIS 361
+C G + + +GDSGGPL GI+S+G P V TR+S
Sbjct: 160 DPRRQICVGDRRERKAAFKGDSGGPLLCNNV-----AHGIVSYGKSSGVP--PEVFTRVS 212
Query: 362 KFVPWVLDT 370
F+PW+ T
Sbjct: 213 SFLPWIRTT 221
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 196 bits (501), Expect = 7e-61
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 26/201 (12%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT-----------YEYDLALVRL 231
+ ++ +G+ +F + E Q R V K + HP +N Y DL L+RL
Sbjct: 48 DKYQVWLGKNNFLEDEPSD--QHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRL 105
Query: 232 ETPVEFAPNIVPICLPGSDDLLIGENATVTGWGRLSE-GGSLPPVLQKVTVPIVSNEKCR 290
P + + PI LP +++ +G +GWG + P LQ V + ++ NE C
Sbjct: 106 SKPADITDVVKPITLP-TEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCD 164
Query: 291 SMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI-GCA 349
++D +CAG +GG +C+ DSGGPL G L GI SWG C
Sbjct: 165 KAH-----EMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDG-----ILQGITSWGPEPCG 214
Query: 350 EANLPGVCTRISKFVPWVLDT 370
E P V T++ KF W+ +T
Sbjct: 215 EPTEPSVYTKLIKFSSWIRET 235
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 195 bits (498), Expect = 2e-60
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 26/201 (12%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT-----------YEYDLALVRL 231
Q ++ +G+ + E Q R V K HP +N + DL L+RL
Sbjct: 45 DQYEVWLGKNKLFQEEPSA--QHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRL 102
Query: 232 ETPVEFAPNIVPICLPGSDDLLIGENATVTGWGRLSE-GGSLPPVLQKVTVPIVSNEKCR 290
P + + PI LP + + G +GWG ++ P LQ V + ++ NE C
Sbjct: 103 SKPADITDVVKPIALP-TKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCA 161
Query: 291 SMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG-IGCA 349
++ + ++D+ +CAG GG+D+C+ DSGGPL G L G S+G + C
Sbjct: 162 KVY-----LQKVTDVMLCAGEMGGGKDTCRDDSGGPLICDG-----ILQGTTSYGPVPCG 211
Query: 350 EANLPGVCTRISKFVPWVLDT 370
+ +P + T + KF W+ DT
Sbjct: 212 KPGVPAIYTNLIKFNSWIKDT 232
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 197 bits (502), Expect = 2e-60
Identities = 38/195 (19%), Positives = 69/195 (35%), Gaps = 21/195 (10%)
Query: 180 LLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAP 239
LL I ++ S+ + VH +Y+ E DL+L+ LE P++
Sbjct: 97 LLHRNITVKTYFNRTSQDP-----LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPG 151
Query: 240 NIVPICLPGSD----DLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLR 295
+P+C P D L+ ++GW R G L L V +V E+C +
Sbjct: 152 AGLPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTLVEGEECGQVLNV 209
Query: 296 AGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPG 355
++ C + G + + G +FL G++
Sbjct: 210 T-----VTTRTYCER---SSVAAMHWMDGSVV-TREHRGSWFLTGVLGSQ-PVGGQAHMV 259
Query: 356 VCTRISKFVPWVLDT 370
+ T++S++ W
Sbjct: 260 LVTKVSRYSLWFKQI 274
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 193 bits (493), Expect = 6e-60
Identities = 58/193 (30%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYE---YDLALVRLETPVEFAP 239
+ +R+G++ ++P QE V + + HP YN E +D+ L+RL+
Sbjct: 45 QKYSVRLGDHSLQSRDQPE--QEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGD 102
Query: 240 NIVPICLPGSDDLLIGENATVTGWGRLSE-GGSLPPVLQKVTVPIVSNEKCRSMFLRAGR 298
+ P+ L + +G+ ++GWG ++ + P L V I S KC +
Sbjct: 103 KVKPVQLA-NLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAY----- 156
Query: 299 YEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CAEANLPGVC 357
I++ +CAG G D+CQGDSGGPL G L GI SWG C + PGV
Sbjct: 157 PGKITEGMVCAGSS-NGADTCQGDSGGPLVCDG-----MLQGITSWGSDPCGKPEKPGVY 210
Query: 358 TRISKFVPWVLDT 370
T+I ++ W+ T
Sbjct: 211 TKICRYTTWIKKT 223
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 193 bits (492), Expect = 8e-60
Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 24/196 (12%)
Query: 177 VNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVE 236
+ + + + +G ++ E P Q+ V ++ Y+ D+ L++L +P
Sbjct: 46 LRDIPQRLVNVVLGAHNVRTQE---PTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPAN 102
Query: 237 FAPNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLR 295
+ ++ + LP D + G GWGR+ VLQ++ V +V+
Sbjct: 103 LSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVTFFCRPHN--- 159
Query: 296 AGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI-GCAEANLP 354
+C C GDSGGPL G + GI S+ I GCA P
Sbjct: 160 -----------ICTFVPRRKAGICFGDSGGPLICDG-----IIQGIDSFVIWGCATRLFP 203
Query: 355 GVCTRISKFVPWVLDT 370
TR++ +V W+ T
Sbjct: 204 DFFTRVALYVDWIRST 219
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 193 bits (493), Expect = 9e-60
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT-----------YEYDLALVRL 231
+ ++ +G + K E Q R V + HP Y + DL L+ L
Sbjct: 43 NNYQVLLGRNNLFKDEPFA--QRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHL 100
Query: 232 ETPVEFAPNIVPICLPGSDDLLIGENATVTGWGRLSEGGSLPP-VLQKVTVPIVSNEKCR 290
P + + I LP + + +G +GWG + + LQ V + ++SNEKC
Sbjct: 101 SEPADITGGVKVIDLP-TKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCI 159
Query: 291 SMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CA 349
+ + ++D+ +CAG GG+D+C GDSGGPL G L GI S G CA
Sbjct: 160 ETY-----KDNVTDVMLCAGEMEGGKDTCAGDSGGPLICDG-----VLQGITSGGATPCA 209
Query: 350 EANLPGVCTRISKFVPWVLDT 370
+ P + ++ KF W+
Sbjct: 210 KPKTPAIYAKLIKFTSWIKKV 230
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 193 bits (492), Expect = 1e-59
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 27/204 (13%)
Query: 181 LTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT-----------YEYDLALV 229
++ ++ +G ++ E Q V + HP +N Y +DL L+
Sbjct: 43 ISDNYQLWLGRHNLFDDENTA--QFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLL 100
Query: 230 RLETPVE-FAPNIVPICLPGSDDLLIGENATVTGWGRL-SEGGSLPPVLQKVTVPIVSNE 287
RL P + + + LP +++ +G +GWG + E S P LQ V + I+ N+
Sbjct: 101 RLTEPADTITDAVKVVELP-TEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPND 159
Query: 288 KCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWG-I 346
+C+ + ++D +C G GG+D+C GDSGGPL G L G+ SWG +
Sbjct: 160 ECKKAH-----VQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDG-----VLQGVTSWGYV 209
Query: 347 GCAEANLPGVCTRISKFVPWVLDT 370
C N P V R+ +V W+ DT
Sbjct: 210 PCGTPNKPSVAVRVLSYVKWIEDT 233
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 192 bits (489), Expect = 3e-59
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT-----------YEYDLALVRL 231
++ I +G + E+ Q V HP Y+ +DL L+RL
Sbjct: 45 NKSVILLGRHSLFHPEDTG--QVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRL 102
Query: 232 ETPVEFAPNIVPICLPGSDDLLIGENATVTGWGRL-SEGGSLPPVLQKVTVPIVSNEKCR 290
P E + + LP + + +G +GWG + E P LQ V + ++SN+ C
Sbjct: 103 SEPAELTDAVKVMDLP-TQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCA 161
Query: 291 SMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGI-GCA 349
+ + ++ +CAG GG+ +C GDSGGPL G L GI SWG CA
Sbjct: 162 QVH-----PQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCNG-----VLQGITSWGSEPCA 211
Query: 350 EANLPGVCTRISKFVPWVLDT 370
P + T++ + W+ DT
Sbjct: 212 LPERPSLYTKVVHYRKWIKDT 232
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 194 bits (495), Expect = 4e-59
Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 23/191 (12%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
I ++ S+ + VH +Y+ E DL+L+ LE P++
Sbjct: 140 HRNITVKTYFNRTSQDP-----LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAG 194
Query: 242 VPICLPGSDD----LLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAG 297
+P+C P D L+ ++GW R G L L V +V E+C +
Sbjct: 195 LPVCTPEKDFAEHLLIPRTRGLLSGWAR--NGTDLGNSLTTRPVTLVEGEECGQV----- 247
Query: 298 RYEF-ISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
++ C + G + + G +FL G++ +
Sbjct: 248 -LNVTVTTRTYCER---SSVAAMHWMDGSVVTRE-HRGSWFLTGVLGSQ-PVGGQAHMVL 301
Query: 357 CTRISKFVPWV 367
T++S++ W
Sbjct: 302 VTKVSRYSLWF 312
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 190 bits (484), Expect = 2e-58
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 26/201 (12%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYN-----------FFTYEYDLALVRL 231
+I +G ++ SK E+ Q V + P+++ + +DL L+RL
Sbjct: 45 DDYQIWLGRHNLSKDEDTA--QFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRL 102
Query: 232 ETPVEFAPNIVPICLPGSDDLLIGENATVTGWGRLSE-GGSLPPVLQKVTVPIVSNEKCR 290
P + + LP + + +G +GWG +S LQ V + + SNEKC
Sbjct: 103 AQPARITDAVKILDLP-TQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCA 161
Query: 291 SMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIG-CA 349
+ E +++ +CA + C GDSGG L G GI SWG CA
Sbjct: 162 RAY-----PEKMTEFVLCATHRDDSGSICLGDSGGALICDGV-----FQGITSWGYSECA 211
Query: 350 EANLPGVCTRISKFVPWVLDT 370
+ N V T++ W+ +T
Sbjct: 212 DFNDNFVFTKVMPHKKWIKET 232
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 189 bits (480), Expect = 2e-53
Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 178 NSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEF 237
S S K+ +G + LE QE V + + P D+AL++L +P
Sbjct: 607 KSPRPSSYKVILGAHQEVNLEPHV--QEIEVSRLFLEPTRK------DIALLKLSSPAVI 658
Query: 238 APNIVPICLPGSDDLL-IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRA 296
++P CLP + ++ +TGWG +G +L++ +P++ N+ C
Sbjct: 659 TDKVIPACLPSPNYVVADRTECFITGWGET-QGTFGAGLLKEAQLPVIENKVCNRYEFLN 717
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGV 356
GR + +CAG GG DSCQGDSGGPL V + +Y L G+ SWG+GCA N PGV
Sbjct: 718 GR---VQSTELCAGHLAGGTDSCQGDSGGPL-VCFEKDKYILQGVTSWGLGCARPNKPGV 773
Query: 357 CTRISKFVPWVLDT 370
R+S+FV W+
Sbjct: 774 YVRVSRFVTWIEGV 787
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 176 bits (448), Expect = 4e-53
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 22/194 (11%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIV 242
+ + +G + + + H +N TY D+AL+++ VE+ NI
Sbjct: 51 VSVVVYLGSAVQYE-----GEAVVNSERIISHSMFNPDTYLNDVALIKIP-HVEYTDNIQ 104
Query: 243 PICLPGSDDLL---IGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRY 299
PI LP ++L ATV+GWG+ + +LQ ++ N++C +
Sbjct: 105 PIRLPSGEELNNKFENIWATVSGWGQSNTD---TVILQYTYNLVIDNDRCAQEY----PP 157
Query: 300 EFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRYFLAGIISWGIGCA-EANLPGVCT 358
I + +C G+ C GDSGGP + + L G++S+ G E+ P +
Sbjct: 158 GIIVESTICGDTS-DGKSPCFGDSGGPFVL---SDKNLLIGVVSFVSGAGCESGKPVGFS 213
Query: 359 RISKFVPWVLD-TG 371
R++ ++ W+ TG
Sbjct: 214 RVTSYMDWIQQNTG 227
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 170 bits (434), Expect = 4e-52
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 218 NFFTYEYDLALVRLETPVEFAPNIVPICLPGSDDLLIGENATVTGWGRLSEGGS---LPP 274
+ Y +DL L+RL++P + + + LP + L G +GWG + G P
Sbjct: 2 DGKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPEL-GSTCEASGWGSIEPGPDDFEFPD 60
Query: 275 VLQKVTVPIVSNEKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDG 334
+Q V + ++ N C + +++ +CAG+ GG+D+C GDSGGPL G
Sbjct: 61 EIQCVQLTLLQNTFCADAH-----PDKVTESMLCAGYLPGGKDTCMGDSGGPLICNGM-- 113
Query: 335 RYFLAGIISWGIG-CAEANLPGVCTRISKFVPWVLDT 370
GI SWG C AN P + T++ ++ W+ DT
Sbjct: 114 ---WQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDT 147
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 180 bits (459), Expect = 6e-52
Identities = 51/232 (21%), Positives = 84/232 (36%), Gaps = 55/232 (23%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF---------TYEYDLALVRLET 233
IK+ VG ++ + + HP YN Y+YD+AL++L+
Sbjct: 268 HSIKVSVGGEK----------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKN 317
Query: 234 PVEFAPNIVPICLP-GSDDLLIGENATVTGWGRLSEG------------GSLPPVLQKVT 280
+++ I PICLP T + E L +
Sbjct: 318 KLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 377
Query: 281 VPIVSNEK---CRSMFLRAGRYEF-------ISDIFMCAGFDNG--GRDSCQGDSGGPLQ 328
V I + +K C A Y+ ++ F+C G + ++C+GDSGGPL
Sbjct: 378 VYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLI 437
Query: 329 VKGKDGRYFLAGIISWGI--GCAEAN--------LPGVCTRISKFVPWVLDT 370
V K R+ G+ISWG+ C + + +PW+ +
Sbjct: 438 VH-KRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEK 488
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 179 bits (455), Expect = 3e-51
Identities = 45/231 (19%), Positives = 85/231 (36%), Gaps = 55/231 (23%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFT---------YEYDLALVRLET 233
S ++ VG+ +E + K ++ P ++ F Y D+AL++L
Sbjct: 273 SLWRVNVGDPKSQ------WGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQ 326
Query: 234 PVEFAPNIVPICLPGSDDLLI------GENATVTGWGRLSEGGSLPPV--LQKVTVPI-- 283
V+ + + PICLP + + + G L++ L + I
Sbjct: 327 KVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINL 386
Query: 284 ---VSNEKCRSMFLRAGRY--------EFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGK 332
V C + + E ++D F+C+G C+G+SGG + ++ +
Sbjct: 387 KMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGT-QEDESPCKGESGGAVFLE-R 444
Query: 333 DGRYFLAGIISWGI-----GCAEAN------------LPGVCTRISKFVPW 366
R+F G++SWG+ G A+ N + + PW
Sbjct: 445 RFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPW 495
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 169 bits (429), Expect = 2e-46
Identities = 51/232 (21%), Positives = 85/232 (36%), Gaps = 55/232 (23%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFF---------TYEYDLALVRLET 233
IK+ VG ++ + + HP YN Y+YD+AL++L+
Sbjct: 510 HSIKVSVGGEK----------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKN 559
Query: 234 PVEFAPNIVPICLPGSDD------LLIGENATVTGWGRLSEGGS-------LPPVLQKVT 280
+++ I PICLP ++ L L L +
Sbjct: 560 KLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 619
Query: 281 VPIVSNEK---CRSMFLRAGRYEF-------ISDIFMCAGFDNG--GRDSCQGDSGGPLQ 328
V I + +K C A Y+ ++ F+C G + ++C+GDSGGPL
Sbjct: 620 VYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLI 679
Query: 329 VKGKDGRYFLAGIISWGI--GCAEAN--------LPGVCTRISKFVPWVLDT 370
V K R+ G+ISWG+ C + + +PW+ +
Sbjct: 680 VH-KRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEK 730
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 133 bits (338), Expect = 1e-38
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 270 GSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQV 329
+ P LQ+ ++P++SN C+ + I D +CAG G SC GDSGGPL
Sbjct: 1 ANTPDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSCMGDSGGPLVC 53
Query: 330 KGKDGRYFLAGIISWGIGCAEANLPGVCTRISKFVPWVLDT 370
K K+G + L GI+SWG + PGV R++ V WV T
Sbjct: 54 K-KNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 93
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 84.5 bits (210), Expect = 5e-20
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNI 241
T+ + GE+D E Q+ + K + KYN T D+ L++L T F+ +
Sbjct: 46 TTSDVVVAGEFDQGSSSEKI--QKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTV 103
Query: 242 VPICLPGSDDLL-IGENATVTGWGRL 266
+CLP + D G TGWG
Sbjct: 104 SAVCLPSASDDFAAGTTCVTTGWGLT 129
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 53.8 bits (129), Expect = 1e-08
Identities = 18/153 (11%), Positives = 46/153 (30%), Gaps = 29/153 (18%)
Query: 201 YPYQERGVVKKMVHPKY-NFFTYEYDLALVRLETPVEFAPNIVPICLPGSDDLLIGENAT 259
+ + V Y N +YD A+++ +T + + + +L G
Sbjct: 72 AVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI--GNTVGYRSIRQVTNLT-GTTIK 128
Query: 260 VTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSC 319
++G+ + +++ + + + + D+
Sbjct: 129 ISGYPGDKMRSTGKVSQWEMSGSVTREDTNLAYY---------------------TIDTF 167
Query: 320 QGDSGGPLQVKGKDGRYFLAGIISWGIGCAEAN 352
G+SG + D + G+ + G N
Sbjct: 168 SGNSGSAML----DQNQQIVGVHNAGYSNGTIN 196
Score = 30.7 bits (69), Expect = 0.64
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 4/32 (12%)
Query: 371 GDSGGPLQVKGKDGRYFLAGIISWGIGCAEAN 402
G+SG + D + G+ + G N
Sbjct: 169 GNSGSAML----DQNQQIVGVHNAGYSNGTIN 196
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 35.6 bits (83), Expect = 0.003
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 183 SQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYN 218
++ +G ++ + E Q GV HP +N
Sbjct: 45 DNYEVWLGRHNLFENENTA--QFFGVTADFPHPGFN 78
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 35.8 bits (82), Expect = 0.014
Identities = 20/156 (12%), Positives = 35/156 (22%), Gaps = 22/156 (14%)
Query: 201 YPYQERGVVKKMVHPKY-NFFTYEYDLALVRLETPVEFAPNIVPICLPGSDDLLIGENAT 259
+ + + ++ N +E+D A LET
Sbjct: 66 SEHGVWAAEELVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQ-PRGQY 124
Query: 260 VTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSC 319
+ +G + L ++ S C +
Sbjct: 125 YSAYGYPAAAPFNGQELHSCHGTATNDPMGSSTQ-----------GIPC--------NMT 165
Query: 320 QGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPG 355
G SGGP G S+G + G
Sbjct: 166 GGSSGGPW-FLGNGTGGAQNSTNSYGYTFLPNVMFG 200
Score = 30.1 bits (67), Expect = 1.2
Identities = 9/35 (25%), Positives = 11/35 (31%), Gaps = 1/35 (2%)
Query: 371 GDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPG 405
G SGGP G S+G + G
Sbjct: 167 GSSGGPW-FLGNGTGGAQNSTNSYGYTFLPNVMFG 200
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.0 bits (74), Expect = 0.070
Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 27/56 (48%)
Query: 205 ERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAPNIVPICLPGSDDLLIGENATV 260
E+ +KK+ + L L +A + P L I AT+
Sbjct: 18 EKQALKKL----------QASLKL--------YADDSAPA-------LAI--KATM 46
Score = 27.6 bits (60), Expect = 5.7
Identities = 7/25 (28%), Positives = 10/25 (40%), Gaps = 6/25 (24%)
Query: 71 KNEISPLAQEKTSPTL-LYTKPSTP 94
K + +K +L LY S P
Sbjct: 19 KQAL-----KKLQASLKLYADDSAP 38
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.6 bits (79), Expect = 0.080
Identities = 49/254 (19%), Positives = 75/254 (29%), Gaps = 90/254 (35%)
Query: 192 YDFSKLE----EP-----YPYQERGVVKKMVHPKYNFFTYE--YDLALVRLETPVEFAPN 240
Y FS L+ P + E+G K + Y+ +E D L + E +
Sbjct: 1657 YGFSILDIVINNPVNLTIHFGGEKG---KRIRENYSAMIFETIVDGKLKTEKIFKEINEH 1713
Query: 241 IVPICLPGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVP-IVSNEKCRSMF--LRA- 296
LL +AT + T P + EK + F L++
Sbjct: 1714 STSYTFRSEKGLL---SAT------------------QFTQPALTLMEK--AAFEDLKSK 1750
Query: 297 GRYEFISDIFMCAGFDNGGRDSCQGDSGGPLQVKGKDGRY----FLAGIISWGIGCAEAN 352
G I AG S L G Y LA ++S E+
Sbjct: 1751 G---LIPADATFAGH-----------S---L------GEYAALASLADVMSI-----ESL 1782
Query: 353 LPGVCTR---ISKFVPWVLDTGDSGGPLQVKGKDGRYFLAGII--SWGIGCAEANLPGVC 407
+ V R + VP D G Y + I ++ L V
Sbjct: 1783 VEVVFYRGMTMQVAVP-----RDELG-------RSNYGMIAINPGRVAASFSQEALQYVV 1830
Query: 408 TRISKFVPWVLDTV 421
R+ K W+++ V
Sbjct: 1831 ERVGKRTGWLVEIV 1844
Score = 32.3 bits (73), Expect = 0.33
Identities = 52/245 (21%), Positives = 77/245 (31%), Gaps = 76/245 (31%)
Query: 125 TPRPMLSYYS------HKDISSKNTTQRPYVKPLKESLGRPVNVYSNNEKVDDF----ST 174
P PMLS + ++ N + P K ++ SL VN N
Sbjct: 334 VPSPMLSISNLTQEQVQDYVNKTN-SHLPAGKQVEISL---VNGAKN------LVVSGPP 383
Query: 175 ESVNSLLTSQIKIRVG-EYDFSKLEEPYPYQERGVVKKMVHPKYN-----FFTYEY---- 224
+S+ L + K + D S++ P+ ER K ++ F +
Sbjct: 384 QSLYGLNLTLRKAKAPSGLDQSRI----PFSER---KLKFSNRFLPVASPFHS-HLLVPA 435
Query: 225 -DLALVRLETP-VEFAPNIVPICLPGSDDLLIGENATVTGWGRLSEGGSLPPVL--QKVT 280
DL L V F D+ I T G GS+ + +
Sbjct: 436 SDLINKDLVKNNVSFNAK----------DIQIPVYDTFDGSDLRVLSGSISERIVDCIIR 485
Query: 281 VPIVSN-EKCRSMFLRAGRYEFISDIFMCAGFDNGGRDSCQGDSG-GPLQVKGKDG---R 335
+P+ E +A I D F G G SG G L + KDG R
Sbjct: 486 LPV--KWETT--TQFKATH---ILD------FGPG------GASGLGVLTHRNKDGTGVR 526
Query: 336 YFLAG 340
+AG
Sbjct: 527 VIVAG 531
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase;
2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Length = 246
Score = 32.2 bits (73), Expect = 0.25
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 182 TSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALVRLETPVEFAP-- 239
S I + ++ E + +++ Y DLA+++L+ +
Sbjct: 74 PSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYG---QGLDLAIIKLKPNEKGESAG 130
Query: 240 -NIVPICLPGSDDLLIGENATVTG 262
I P +P D+ G+ ++ G
Sbjct: 131 DLIQPANIPDHIDIAKGDKYSLLG 154
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A
{Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A
1exf_A 1due_A
Length = 242
Score = 30.6 bits (69), Expect = 0.69
Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 23/156 (14%)
Query: 120 KPYRQTPRPMLSYYSHKDISSKNTTQRPY-----VKPLKESLGRPV-----NVYSNNEKV 169
Y L + K+ + PY V ++ V V +N
Sbjct: 15 NKYYGVNAFNLPKELFSKVDEKDRQKYPYNTIGNVFVKGQTSATGVLIGKNTVLTNRHIA 74
Query: 170 DDFSTESVNSLLTSQIKIRVGEYDFSKLEEPYPYQERGVVKKMVHPKYNFFTYEYDLALV 229
+ + ++ R PY E V + + P F DLAL+
Sbjct: 75 KFANGDPS------KVSFRPSINTDDNGNTETPYGEYEVKEILQEP----FGAGVDLALI 124
Query: 230 RLETP---VEFAPNIVPICLPGSDDLLIGENATVTG 262
RL+ V I P + S+DL G+ + G
Sbjct: 125 RLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIG 160
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 29.6 bits (66), Expect = 1.7
Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 216 KYNFFTYEYDLALVRLETPVEFAP---NIVPICLPGSDDLLIGENATVTG 262
+ ++ E DLA+V+ + + P + + + + +N TVTG
Sbjct: 84 QITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTG 133
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 29.0 bits (64), Expect = 2.7
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 216 KYNFFTYEYDLALVRLETPVEFAP---NIVPICLPGSDDLLIGENATVTGW 263
+ ++ E DLA+V+ + + P + + + +N TVTG+
Sbjct: 84 QITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGY 134
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT
catalysis, protein folding, protein stability, packing
DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes}
SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A*
1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A*
2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A
1gbl_A ...
Length = 198
Score = 27.6 bits (61), Expect = 5.6
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 247 PGSDDLLIGENATVTGWGRLSEGGSLPPVLQKVTVPIVSNEKCRSMFLRAGRYEFISDIF 306
PG+D + + T R++ G S V T V CRS + I+
Sbjct: 60 PGNDRAWVSLTSAQTLLPRVANGSSFVTVRG-STEAAVGAAVCRSGRTTGYQCGTITAKN 118
Query: 307 MCAGFDNGGR------DSC--QGDSGGPLQVKGKDGRYFLAGIISWGIGCAEANLPGVCT 358
+ A + G ++C +GDSGG G++S G + N G+
Sbjct: 119 VTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQ----AQGVMSGGNVQSNGNNCGIPA 174
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.138 0.434
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,451,956
Number of extensions: 379589
Number of successful extensions: 1400
Number of sequences better than 10.0: 1
Number of HSP's gapped: 806
Number of HSP's successfully gapped: 207
Length of query: 422
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 326
Effective length of database: 4,021,377
Effective search space: 1310968902
Effective search space used: 1310968902
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.4 bits)