BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15061
(226 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2YDD3|ZFPL1_BOVIN Zinc finger protein-like 1 OS=Bos taurus GN=ZFPL1 PE=2 SV=1
Length = 312
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 152/259 (58%), Gaps = 47/259 (18%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKRKVTN FC+EHRVNVCE+C+V NH KCIVQSYLQWL+DSDYNP C LC L
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
AA RL CY ++HW+CLN A QLP TAPAGY+CP C +FPP NL PVA LRE
Sbjct: 61 AARETTRLICYDLFHWACLNERAAQLPRNTAPAGYQCPSCSGPIFPPTNLAGPVASALRE 120
Query: 121 KLSSVNWARVGLGLPLLNDEVEHKPS-MTSAAKSFVHTYNKSVEPADVYTSGMSV----- 174
KL++VNWAR GLGLPL+++ V +P + ++ S ++N S P T+ S
Sbjct: 121 KLATVNWARAGLGLPLIDELVSPEPEPLNTSEFSDWSSFNASGSPEQEETASASAAPAFY 180
Query: 175 --------------QNT----------------RRVYQSVDIEEVPPSHHHHHHPVAPVS 204
Q+T R+VY + D E P H
Sbjct: 181 SQVPRPPASPSRPEQHTVIHMGNPEPLTHASAPRKVYDTRDDERAPGLH----------- 229
Query: 205 RDHDENKYKRRSIVEWISR 223
RD D++KY+RR + W+++
Sbjct: 230 RDCDDDKYRRRPALGWLAQ 248
>sp|A1L2S8|ZFPL1_XENLA Zinc finger protein-like 1 OS=Xenopus laevis GN=zfpl1 PE=2 SV=1
Length = 320
Score = 231 bits (588), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/260 (47%), Positives = 150/260 (57%), Gaps = 41/260 (15%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKRKVTN FC+EHRVNVCE+C+V NH KCIVQSYLQWL+DSDYNP C LC L
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNTLL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
+++ RL CY ++HWSCLN A Q P TAPAGY+CP C+ +FPPNNLVSPVA LRE
Sbjct: 61 SSKETARLVCYDLFHWSCLNDLATQQPPNTAPAGYRCPSCQGPVFPPNNLVSPVAATLRE 120
Query: 121 KLSSVNWARVGLGLPLL--------------------------NDEVEHKPSMTSAAKSF 154
KLS+VNWAR GLGLPL+ +D + P TS
Sbjct: 121 KLSTVNWARAGLGLPLIEVAEPVDDTMSHDETDYRDWSVVNSSSDNLSETPETTSQTG-- 178
Query: 155 VHTYNKSVEPADVYTS--GMSVQNTRRVYQSVDIEEVPPSHHHHHHPVAPVSR------- 205
+TYN SV P V S G Q+ + E VP + V
Sbjct: 179 -YTYN-SVAPGAVQQSLNGNMSQDHAVTIRDTGSESVPFNAASSPRKVYDTRENARGQDA 236
Query: 206 --DHDENKYKRRSIVEWISR 223
D D++KY+RR + W++R
Sbjct: 237 VIDFDDDKYRRRPTLNWLAR 256
>sp|O95159|ZFPL1_HUMAN Zinc finger protein-like 1 OS=Homo sapiens GN=ZFPL1 PE=1 SV=2
Length = 310
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 152/257 (59%), Gaps = 45/257 (17%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKRKVTN FC+EHRVNVCE+C+V NH KCIVQSYLQWL+DSDYNP C LC L
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
A+ RL CY ++HW+CLN A QLP TAPAGY+CP C +FPP NL PVA LRE
Sbjct: 61 ASRETTRLVCYDLFHWACLNERAAQLPRNTAPAGYQCPSCNGPIFPPTNLAGPVASALRE 120
Query: 121 KLSSVNWARVGLGLPLLNDEVEHKPS-MTSAAKSFVHTYNKSVEP----------ADVYT 169
KL++VNWAR GLGLPL+++ V +P + ++ S ++N S P A +
Sbjct: 121 KLATVNWARAGLGLPLIDEVVSPEPEPLNTSDFSDWSSFNASSTPGPEEVDSASAAPAFY 180
Query: 170 S---------GMSVQNT--------------RRVYQSVDIEEVPPSHHHHHHPVAPVSRD 206
S G Q+T R+VY + D + P H D
Sbjct: 181 SQAPRPPASPGRPEQHTVIHMGNPEPLTHAPRKVYDTRDDDRTPGLHG-----------D 229
Query: 207 HDENKYKRRSIVEWISR 223
D++KY+RR + W++R
Sbjct: 230 CDDDKYRRRPALGWLAR 246
>sp|Q0VFM0|ZFPL1_XENTR Zinc finger protein-like 1 OS=Xenopus tropicalis GN=zfpl1 PE=2 SV=1
Length = 320
Score = 226 bits (576), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 153/256 (59%), Gaps = 33/256 (12%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKRKVTN FC+EHRVNVCE+C+V NH KCIVQSYLQWL+DSDYNP C LC L
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNTLL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
+++ RL CY ++HWSCLN A QLP TAPAGY+CP C+ +FPP+NLVSPVA LRE
Sbjct: 61 SSKETARLVCYDLFHWSCLNDLATQLPPNTAPAGYRCPSCQGPVFPPSNLVSPVAATLRE 120
Query: 121 KLSSVNWARVGLGLPLL------NDEVEHKPS-------MTSAAKSFVHTYNKSVEPADV 167
KLS+VNWAR GLGLPL+ +D + H + + S++ + T + +
Sbjct: 121 KLSTVNWARAGLGLPLIEVAEPVDDTMSHDETDYRDWSVVNSSSDNLSETPETTSQTGYA 180
Query: 168 YTS------------------GMSVQNTRRVYQSVDIEEVPPSHHHHHHPV--APVSRDH 207
Y S +++++T +++ P + D
Sbjct: 181 YNSVPTSVAQHSLNVNMSQDHAVTIRDTGSDSLTINAGSSPRKVYDTRETARGQDAVIDF 240
Query: 208 DENKYKRRSIVEWISR 223
D++KY+RR + W++R
Sbjct: 241 DDDKYRRRPTLSWLAR 256
>sp|A7S7Z9|ZFPL1_NEMVE Zinc finger protein-like 1 homolog OS=Nematostella vectensis
GN=zfpl1 PE=3 SV=1
Length = 252
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/225 (47%), Positives = 144/225 (64%), Gaps = 40/225 (17%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPK+KVTNQFC+EHRVNVCEYC+V++H +CIV+SYL WL+DSDYNP C LC +L
Sbjct: 1 MGLCKCPKKKVTNQFCFEHRVNVCEYCLVSSHSRCIVKSYLHWLQDSDYNPVCTLCNGNL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
+ + +RL CY V+H SC+N++A+ LP TAPAGY CP CK G+FPP +VSPV + L++
Sbjct: 61 SDGDVVRLICYDVFHLSCINNFAQSLPPNTAPAGYTCPNCKNGIFPPEKMVSPVVEQLKQ 120
Query: 121 KLSSVNWARVGLGLPLLNDEVEHKPSMTSAAKSFVHTYNKSVEPADVYTSGMSVQNTRRV 180
KLS+ +WA+ GLG+P+ +EP +++S +S +
Sbjct: 121 KLSATSWAKAGLGIPV-----------------------APLEPL-LFSSTVSRK----- 151
Query: 181 YQSVDIEEVPPSHHHHHHPVAPVSRDHDENKYKRRSIVEWISRWW 225
I E P + S DHDENKY+RR ++W SRW+
Sbjct: 152 -----IPEKRPEESLN------TSVDHDENKYQRRGAIDWFSRWF 185
>sp|Q9DB43|ZFPL1_MOUSE Zinc finger protein-like 1 OS=Mus musculus GN=Zfpl1 PE=2 SV=1
Length = 310
Score = 221 bits (563), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 144/246 (58%), Gaps = 23/246 (9%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKRKVTN FC+EHRVNVCE+C+V NH KCIVQSYLQWL+DSDYNP C LC L
Sbjct: 1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNTPL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
A+ RL CY ++HW+C+N A QLP TAPAGY+CP C +FPP NL PVA LRE
Sbjct: 61 ASRETTRLVCYDLFHWACINERAAQLPRNTAPAGYQCPSCNGPIFPPANLAGPVASALRE 120
Query: 121 KLSSVNWARVGLGLPLLNDEVEHKPS-----------MTSAAKSFVHTYNKSVEPADV-Y 168
KL++VNWAR GLGLPL+++ + +P +A + V S A Y
Sbjct: 121 KLATVNWARAGLGLPLIDEVISPEPEPLNSSDFSDWSSFNATTTSVQEERASTPSAPAFY 180
Query: 169 TSGMSVQNTRRVYQSVDIEEVPPSHHHHHHP-----------VAPVSRDHDENKYKRRSI 217
+ + + + + + H P A + D D++KY+RR
Sbjct: 181 SQAPRPPPSPSRPEQHTVIHMGSTEALAHAPRKVYDTRDDDRTAGIHGDCDDDKYRRRPA 240
Query: 218 VEWISR 223
+ W+++
Sbjct: 241 LGWLAQ 246
>sp|Q16N38|ZFPL1_AEDAE Zinc finger protein-like 1 homolog OS=Aedes aegypti GN=AAEL012105
PE=3 SV=1
Length = 290
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 146/240 (60%), Gaps = 24/240 (10%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKR+VT QFC+EHRVNVCE CMV NH KC VQSY+QWL+DSD++ +C LC L
Sbjct: 1 MGLCKCPKRQVTTQFCFEHRVNVCENCMVVNHTKCTVQSYIQWLKDSDFDSSCPLCGSPL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
E+C+RL CYHV+HW CLN + LP+ TAP G+ CP C +FPP NLVSPVADVLR
Sbjct: 61 DNEDCVRLICYHVFHWKCLNAKQQSLPANTAPGGHTCPTCSDPIFPPVNLVSPVADVLRT 120
Query: 121 KLSSVNWARVGLGLPLLNDEVEHKPSMTSAAKSFVHTYNKSVEPADVYTSGMSVQNTRRV 180
+L VNWAR L LPLL+ E KP + A + +N + + S MS +
Sbjct: 121 RLGQVNWARNVLELPLLS---EDKPDYYTTATTSAGVHN-----GNTFASSMSQTRSNER 172
Query: 181 YQS----VDIEE----VPPSHHHHHHPVAPV--------SRDHDENKYKRRSIVEWISRW 224
+S V++E P+ H P+ + D D+NKYKRR+ E SRW
Sbjct: 173 PESPHSIVNMESYVSNASPALDFHASSRRPLLARESPIGASDRDDNKYKRRTPQEIFSRW 232
>sp|P62447|ZFPL1_DANRE Zinc finger protein-like 1 OS=Danio rerio GN=zfpl1 PE=2 SV=1
Length = 317
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/264 (44%), Positives = 155/264 (58%), Gaps = 52/264 (19%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPK+KVTN FC++HRVNVCE+C+V+NH KCIVQSYLQWL+DSDYNP C LC + L
Sbjct: 1 MGLCKCPKKKVTNLFCFKHRVNVCEHCLVSNHNKCIVQSYLQWLQDSDYNPNCSLCIQPL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
+++ +RL CY ++HWSCLN A P TAP GY+CP C+ +FPP NL SPVAD+LRE
Sbjct: 61 DSQDTVRLVCYDLFHWSCLNELASHQPLNTAPDGYQCPTCQGPVFPPRNLASPVADMLRE 120
Query: 121 KLSSVNWARVGLGLPLLNDEVE--------------------------HKPSMTSAA--K 152
+LSSVNWAR GLGLPL+ D E P++TS +
Sbjct: 121 QLSSVNWARAGLGLPLIEDPEEEETTTHSGTSFSEWSTFETTSVDVSMSNPTLTSLPPHQ 180
Query: 153 SFVHTYNKSVEPAD-------VYTSGM------SVQNTRRVYQSVDIEEVPPSHHHHHHP 199
H YN + A V TS +V + R++Y + D+ H
Sbjct: 181 DGEHIYNNREQSAPNNTVFNMVTTSATDTVTISTVTSPRKLYDTRDL---------GHSA 231
Query: 200 VAPVSRDHDENKYKRRSIVEWISR 223
V + D D++KY+RR + W ++
Sbjct: 232 VMQI--DFDDDKYRRRPALNWFAQ 253
>sp|Q9VD26|ZFPL1_DROME Zinc finger protein-like 1 homolog OS=Drosophila melanogaster
GN=CG5382 PE=1 SV=1
Length = 299
Score = 214 bits (545), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 139/241 (57%), Gaps = 19/241 (7%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKR VTNQFC+EHRVNVCE+CMV +HPKCIVQSYLQWL DSDY C LC L
Sbjct: 1 MGLCKCPKRLVTNQFCFEHRVNVCEHCMVQSHPKCIVQSYLQWLRDSDYISNCTLCGTTL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
+C+RL CYHV+HW CLN LP+ TAP G++CP C +FP NLVSPVAD L+
Sbjct: 61 EQGDCVRLVCYHVFHWDCLNARQAALPANTAPRGHQCPACSVEIFPNANLVSPVADALKS 120
Query: 121 KLSSVNWARVGLGLPLLNDEVEH-----KPSMTSAAK----SFVHTYNKSVEPADVYTSG 171
LS VNW R GLGL LL++E KP + S A + VH + E +G
Sbjct: 121 FLSQVNWGRNGLGLALLSEEQSSSLKAIKPKVASQAAVSNMTKVHHIHSGGERERTKPNG 180
Query: 172 MSVQNTRRVYQSVDIEEVPPSHHHHHHPVAPV--------SRDHDENKYKRRSIVEWISR 223
+ V PPS + P+ D D+NKY+RR+ E SR
Sbjct: 181 HDAVSPHSVLLMDAFN--PPSAGDYASSRRPLLPRQSPIGGTDRDDNKYQRRTPAELFSR 238
Query: 224 W 224
W
Sbjct: 239 W 239
>sp|B3P7K6|ZFPL1_DROER Zinc finger protein-like 1 homolog OS=Drosophila erecta GN=GG12524
PE=3 SV=1
Length = 298
Score = 213 bits (543), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/239 (46%), Positives = 140/239 (58%), Gaps = 16/239 (6%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKR VTNQFC+EHRVNVCE+CMV +HPKCIVQSYLQWL DSDY C LC L
Sbjct: 1 MGLCKCPKRLVTNQFCFEHRVNVCEHCMVQSHPKCIVQSYLQWLRDSDYISNCTLCGTTL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
+C+RL CYHV+HW CLN LP+ TAP G++CP C +FP NLVSPVAD L+
Sbjct: 61 EQGDCVRLVCYHVFHWDCLNARQAALPANTAPRGHQCPACTVEIFPNANLVSPVADALKS 120
Query: 121 KLSSVNWARVGLGLPLLNDEVEHKPSMTSAAKSFVHTYNKSVEPADVYTSGMSVQNTRRV 180
LS VNW R GLGL LL++E ++ S N + + +++ G +
Sbjct: 121 FLSQVNWGRNGLGLALLSEEQNSLKAIKPKVASQSAVSNMT-KVHHIHSGGERERTKPNG 179
Query: 181 YQSVDIEEV-------PPSHHHHHHPVAPV--------SRDHDENKYKRRSIVEWISRW 224
+ +V V PPS + P+ D D+NKY+RR+ E SRW
Sbjct: 180 HDAVSPHSVLLMDAFNPPSAGDYASSRRPLLPRQSPIGGTDRDDNKYQRRTPAELFSRW 238
>sp|Q298N4|ZFPL1_DROPS Zinc finger protein-like 1 homolog OS=Drosophila pseudoobscura
pseudoobscura GN=GA18838 PE=3 SV=1
Length = 302
Score = 213 bits (542), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/242 (47%), Positives = 141/242 (58%), Gaps = 19/242 (7%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKR VTNQFC+EHRVNVCE+CMV +HPKCIVQSYLQWL DSDY C LC L
Sbjct: 1 MGLCKCPKRLVTNQFCFEHRVNVCEHCMVQSHPKCIVQSYLQWLRDSDYISNCNLCGTSL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
C+RL CYHV+HW CLN LP+ TAP G++CP C +FP NLVSPVAD L+
Sbjct: 61 EQGECVRLVCYHVFHWDCLNARQAALPANTAPRGHQCPGCSVEIFPNTNLVSPVADALKN 120
Query: 121 KLSSVNWARVGLGLPLLNDE-------VEHKPSMTSAAKSF---VHTYNKSVEPADVYTS 170
L+ VNW R GLGL LL+++ ++ K S++ AA S VH + E +
Sbjct: 121 YLAQVNWGRNGLGLALLSEDQSSSLKAIKSKASVSQAAVSNMTKVHHIHSGGERERGKPN 180
Query: 171 GMSVQNTRRVYQSVDIEEVPPSHHHHHHPVAPV--------SRDHDENKYKRRSIVEWIS 222
G V +D P S + P+ D D+NKY+RR+ +S
Sbjct: 181 GGDASTPHSVLL-MDAFNPPSSGDFNASSRRPLLPRQSPIGGTDRDDNKYQRRTPAALLS 239
Query: 223 RW 224
RW
Sbjct: 240 RW 241
>sp|Q9N4Y9|ZFPL1_CAEEL Zinc finger protein-like 1 homolog OS=Caenorhabditis elegans
GN=Y45G12B.2 PE=3 SV=1
Length = 309
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 140/241 (58%), Gaps = 21/241 (8%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKRKVTN FCYEHRVNVCE+C+V NHP C+VQSYL WL D DY+P C LC+ L
Sbjct: 1 MGLCKCPKRKVTNLFCYEHRVNVCEFCLVDNHPNCVVQSYLTWLTDQDYDPNCSLCKTTL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
A + IRL C H+ HW C + +A P+TTAPAGY+CP C +FPP N VSP+ + LRE
Sbjct: 61 AEGDTIRLNCLHLLHWKCFDEWAANFPATTAPAGYRCPCCSQEVFPPINEVSPLIEKLRE 120
Query: 121 KLSSVNWARVGLGLPLLND-----------EVEHKPSMTSAAKSFVHTYNKSVEPADVY- 168
+L NWAR LGLP L + ++++ P M VH N+S PA
Sbjct: 121 QLKQSNWARAALGLPTLPELNRPVPSPAPPQLKNAPVMHKEVP--VHN-NRSSTPATHLE 177
Query: 169 ---TSGMSVQNTRRVYQSVDIEEVPPSHHHHHHPVAPV-SRDHDENKYKRRSIVEWISRW 224
T+ SV N + + P+ + D++ENKYKRR ++W+
Sbjct: 178 MEDTASYSVSNNDVTFARK--KNYGAESSSDTRPLLQLRDADNEENKYKRRPTMDWMRGL 235
Query: 225 W 225
W
Sbjct: 236 W 236
>sp|A8X2R2|ZFPL1_CAEBR Zinc finger protein-like 1 homolog OS=Caenorhabditis briggsae
GN=CBG06644 PE=3 SV=1
Length = 319
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 138/249 (55%), Gaps = 26/249 (10%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDL 60
MGLCKCPKRKVTN FCYEHRVNVCE+C+V NHP C+VQSYL WL D DY+P C LC L
Sbjct: 1 MGLCKCPKRKVTNLFCYEHRVNVCEFCLVDNHPNCVVQSYLNWLTDQDYDPNCSLCHTTL 60
Query: 61 AAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVADVLRE 120
IRL C H+ HW C + +A P TTAPAGY+CP C +FPP N VSP+ + LRE
Sbjct: 61 TQGETIRLNCLHLLHWRCFDDWAASFPPTTAPAGYRCPCCSQEVFPPINEVSPLIEKLRE 120
Query: 121 KLSSVNWARVGLGLPLLND-----------------EVEHKPSMTSAAKSFVHT-YNKSV 162
+L NWAR LGLP+L + +V+H S A+ + +N+S
Sbjct: 121 QLKQSNWARNALGLPVLPELNRPVKNIAPIPPPPPPQVKHVSYDDSPAQKEIPIHHNRSE 180
Query: 163 EPADVY----TSGMSVQNTRRVYQSVDIEEVPPSHHHHHHPVAPVSRDHD--ENKYKRRS 216
PA T+ SV N+ + + P+ RD D ENKYKRR
Sbjct: 181 TPATHLEMEDTASYSVSNSDVTFARK--KNFASESSSDTRPLLRQDRDADNEENKYKRRP 238
Query: 217 IVEWISRWW 225
++W+ W
Sbjct: 239 TIDWMRGLW 247
>sp|Q551M4|ZFPL1_DICDI Zinc finger protein-like 1 homolog OS=Dictyostelium discoideum
GN=zfpl1 PE=3 SV=1
Length = 354
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 78/132 (59%), Gaps = 6/132 (4%)
Query: 1 MGLCKCPKRKVTNQFCYEHRVNVCEYCMVTNHPKCIVQSYLQWLEDSDY-NPTCELCRKD 59
MG+CKC KR + FC+ H+ +C+ C+V +H C ++SY+ WL D ++ + C +C+
Sbjct: 1 MGICKCKKR--SEDFCFNHKKFICDSCVVADHSICYIKSYVSWLTDCEFEDSVCGVCKGK 58
Query: 60 LAAEN---CIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNLVSPVAD 116
++ +RL CYH+YH C++ Y LP ++ Y CP+C + P N+ S +A+
Sbjct: 59 FDVDDNDDSVRLLCYHLYHPECIDVYVAALPQNSSVESYPCPKCPEPILPSNDKQSLLAN 118
Query: 117 VLREKLSSVNWA 128
+R++ S +WA
Sbjct: 119 SIRDRFSVSSWA 130
>sp|P12868|PEP5_YEAST Vacuolar membrane protein PEP5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PEP5 PE=1 SV=2
Length = 1029
Score = 40.0 bits (92), Expect = 0.012, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 50 NPTCELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNN 109
N TC +CR L + C H+YH CLN L S +KCP+C L N
Sbjct: 925 NQTCFMCRLTLDIP-VVFFKCGHIYHQHCLNEEEDTLESERKL--FKCPKCLVDLETSNK 981
Query: 110 LVSPVADVLREKLSSVNWA 128
L +V+ EK +N+A
Sbjct: 982 LFEAQHEVV-EKNDLLNFA 999
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 39.3 bits (90), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 36 IVQSY-------LQWLEDSDYNPTCELCRKDLAAENCI-RL--TCYHVYHWSCLNHYARQ 85
I+QSY ++ L + Y C +C + E+ + RL TCYHV+H C++ +
Sbjct: 90 IIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLE- 148
Query: 86 LPSTTAPAGYKCPQCKTGLFP--PNNLVSPVADVLRE 120
+ CP C+ L P P N+ + +V++E
Sbjct: 149 -------SNKTCPVCRRNLDPNAPENIKELIIEVIQE 178
>sp|Q8W4Q5|RIN3_ARATH E3 ubiquitin protein ligase RIN3 OS=Arabidopsis thaliana GN=RIN3
PE=1 SV=2
Length = 577
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 45 EDSDYNPTCELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGL 104
E DY+ C +CR+ +A RL C H++H CL + Q + Y CP C+ L
Sbjct: 329 ELRDYDDECAICREPMAKAK--RLHCNHLFHLGCLRSWLDQGLNEV----YSCPTCRKPL 382
Query: 105 F 105
F
Sbjct: 383 F 383
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 37 VQSYLQWLEDSDYNPT----CELCRKDLAAENCIRLT--CYHVYHWSCLNHYARQLPSTT 90
+QSY + L PT C +C D ++ +R C H++H C++ + R P+
Sbjct: 127 IQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPT-- 184
Query: 91 APAGYKCPQCKTGLFPPNNLVSPVADVLREKLSSVNWARV 130
CP C+T P L +P+A+V+ SSV R+
Sbjct: 185 ------CPVCRTSPL-PTPLSTPLAEVV-PLASSVAATRM 216
>sp|Q8VYC8|RIN2_ARATH E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana GN=RIN2
PE=1 SV=1
Length = 578
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 49 YNPTCELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLF 105
Y+ C +CR+ +A RL C H++H CL + Q + Y CP C+ LF
Sbjct: 333 YDDECAICREPMAKAK--RLHCNHLFHLGCLRSWLDQGLNEV----YSCPTCRKPLF 383
>sp|Q2HJD0|FAF2_BOVIN FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1
Length = 445
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 26 YCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDLAAENCIRLTCYHVYHWSCLNHYARQ 85
Y N K ++ L +L D+ + E CR L A I L + W+C
Sbjct: 159 YSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWAC------- 211
Query: 86 LPSTTAPAGYKCPQC 100
ST P GY+ Q
Sbjct: 212 --STNKPEGYRVSQA 224
>sp|Q96CS3|FAF2_HUMAN FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2
Length = 445
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 26 YCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDLAAENCIRLTCYHVYHWSCLNHYARQ 85
Y N K ++ L +L D+ + E CR L A I L + W+C
Sbjct: 159 YSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNTLCAPEVISLINTRMLFWAC------- 211
Query: 86 LPSTTAPAGYKCPQC 100
ST P GY+ Q
Sbjct: 212 --STNKPEGYRVSQA 224
>sp|A8Y4B2|HRD1_CAEBR E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae
GN=sel-11 PE=3 SV=2
Length = 622
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 45 EDSDYNPTCELCRKDLAAENC-IRLTCYHVYHWSCLNH-YARQLPSTTAPAGYKCPQCKT 102
E S + TC +CR+++ E+ RL C HV+H CL + RQ CP C+T
Sbjct: 284 ELSAMDATCIICREEMTVESSPKRLPCSHVFHAHCLRSWFQRQ---------QTCPTCRT 334
Query: 103 GL 104
+
Sbjct: 335 DI 336
>sp|Q3TDN2|FAF2_MOUSE FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=2 SV=2
Length = 445
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 26 YCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDLAAENCIRLTCYHVYHWSCLNHYARQ 85
Y N K ++ L +L D+ + E CR L A I L + W+C
Sbjct: 159 YSQALNDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWAC------- 211
Query: 86 LPSTTAPAGYKCPQC 100
ST P GY+ Q
Sbjct: 212 --STNKPEGYRVSQA 224
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 45 EDSDYNPTCELCRKDLAAENCIRLT--CYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKT 102
++S C +C D + IR+ C H++H +C++ + R P+ CP C+T
Sbjct: 121 KESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPT--------CPVCRT 172
Query: 103 GLFPPNNLVSPVADVL 118
P+ ++PVADV+
Sbjct: 173 SPL-PSPAMTPVADVV 187
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 33.9 bits (76), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 34 KCIVQSYLQWLEDSD--YNP---TCELCRKDLAAENCIR-LTCYHVYHWSCLNHYARQLP 87
K I Q L+ L+D D +P +C +C A++ IR LTC H +H +C++ +
Sbjct: 245 KAIGQLQLRVLQDGDKELDPNEDSCVVCFDMYKAQDVIRILTCKHFFHKTCIDPWLL--- 301
Query: 88 STTAPAGYKCPQCKTGLFPP 107
A CP CK + P
Sbjct: 302 -----AHRTCPMCKCDILKP 316
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 39 SYLQWLEDSDYNPTCELCRKDLAAENCIRL--TCYHVYHWSCLN 80
S ++ L + Y C +C + ++ +RL TCYHV+H C++
Sbjct: 96 SSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECID 139
>sp|A6QLA0|NFX1_BOVIN Transcriptional repressor NF-X1 OS=Bos taurus GN=NFX1 PE=2 SV=1
Length = 1116
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 53 CELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPSTT-APAGYKCPQCK 101
CEL R +C +CYHV+H +C+ +AR S +G++CP C+
Sbjct: 359 CELVRVTAPVWSC--QSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQ 406
>sp|Q12986|NFX1_HUMAN Transcriptional repressor NF-X1 OS=Homo sapiens GN=NFX1 PE=1 SV=2
Length = 1120
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 53 CELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPSTT-APAGYKCPQCK 101
CEL R +C +CYHV+H +C+ +AR S +G++CP C+
Sbjct: 362 CELVRVTAPVWSC--QSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQ 409
>sp|Q5BK32|FAF2_RAT FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1
Length = 346
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 26 YCMVTNHPKCIVQSYLQWLEDSDYNPTCELCRKDLAAENCIRLTCYHVYHWSCLNHYARQ 85
Y + K ++ L +L D+ + E CR L A I L + W+C
Sbjct: 60 YSQALSDAKRELRFLLVYLHGDDHQDSDEFCRNALCAPEVISLINSRMLFWAC------- 112
Query: 86 LPSTTAPAGYKCPQC 100
ST P GY+ Q
Sbjct: 113 --STNKPEGYRVSQA 125
>sp|Q7TPV2|DZIP3_MOUSE E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus GN=Dzip3 PE=2 SV=2
Length = 1204
Score = 33.1 bits (74), Expect = 1.6, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 53 CELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPP 107
C +C ++L+ EN L C H +H C+ + Q + CP C+ + P
Sbjct: 1144 CVICHENLSPENLSVLPCAHKFHSQCIRPWLMQQGT--------CPTCRLHVLQP 1190
>sp|Q86Y13|DZIP3_HUMAN E3 ubiquitin-protein ligase DZIP3 OS=Homo sapiens GN=DZIP3 PE=1 SV=2
Length = 1208
Score = 32.3 bits (72), Expect = 2.6, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 53 CELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPP 107
C +C ++L+ EN L C H +H C+ + Q + CP C+ + P
Sbjct: 1148 CVICHENLSPENLSVLPCAHKFHAQCIRPWLMQQGT--------CPTCRLHVLLP 1194
>sp|O06987|YVDE_BACSU Uncharacterized HTH-type transcriptional regulator YvdE OS=Bacillus
subtilis (strain 168) GN=yvdE PE=4 SV=1
Length = 316
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 141 VEHKPSMTSAAKSFVHTYNKSVEPADVYTSGMSVQNTRRVYQSVDIEEVPPSHHHHHHPV 200
+ H ++T K VH+ K + Y + VQN +V + + +EE+ + ++ + +
Sbjct: 22 INHPETVTDELKKLVHSAMKELNYIPNYAARALVQNRTQVVKLLILEEMDTTEPYYMNLL 81
Query: 201 APVSRDHDENKY 212
+SR+ D N Y
Sbjct: 82 TGISRELDRNHY 93
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 32.0 bits (71), Expect = 3.1, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 53 CELCRKDLAAENCIRLTCYHVYHWSC 78
C LC++ A +C R+ C +VYH++C
Sbjct: 5143 CSLCQRTGATSSCNRMRCPNVYHFAC 5168
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 32.0 bits (71), Expect = 3.2, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 53 CELCRKDLAAENCIRLTCYHVYHWSC 78
C LC++ A +C R+ C +VYH++C
Sbjct: 5092 CSLCQRTGATSSCNRMRCPNVYHFAC 5117
>sp|Q9ZU51|RHA2B_ARATH Probable E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana
GN=RHA2B PE=1 SV=2
Length = 147
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 21/91 (23%)
Query: 30 TNHPKCIVQSYLQWLEDS-DYNPTCELCRKDLAAENCI-------------RLTCYHVYH 75
++ P +V S L L D + N D AA +CI +L C HV+H
Sbjct: 38 SSAPVVVVTSNLSVLADQLNLNRLFSYRYSDNAASDCIVCLSKLKTGEEVRKLDCRHVFH 97
Query: 76 WSCLNHYARQLPSTTAPAGYKCPQCKTGLFP 106
CL + + L + CP C++ L P
Sbjct: 98 KQCLEGWLQHL-------NFNCPLCRSPLLP 121
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 37 VQSYLQWLEDSDYNPTCELCRKDLAAENCIR-LTCYHVYHWSCLNHY 82
+SY Q DS+ C +C D A N +R L C H +H C++ +
Sbjct: 598 TRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRW 644
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 53 CELCRKDLAAENCIRLT--CYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGLFPPNNL 110
C +C + + +R C+H +H C++ + R P+ CP C+T + +
Sbjct: 156 CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPN--------CPLCRTAILGSAGV 207
Query: 111 VSPVA 115
++P++
Sbjct: 208 LTPMS 212
>sp|B1AY10|NFX1_MOUSE Transcriptional repressor NF-X1 OS=Mus musculus GN=Nfx1 PE=2 SV=1
Length = 1114
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 69 TCYHVYHWSCLNHYARQLPS-TTAPAGYKCPQCK 101
+C+HV+H +C+ +AR S +G++CP C+
Sbjct: 370 SCFHVFHLNCIKKWARSPASHADGQSGWRCPACQ 403
>sp|Q20798|HRD1_CAEEL E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis elegans
GN=sel-11 PE=3 SV=1
Length = 610
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 11/57 (19%)
Query: 50 NPTCELCRKDLAAENC-IRLTCYHVYHWSCLNH-YARQLPSTTAPAGYKCPQCKTGL 104
+ TC +CR+++ + RL C HV+H CL + RQ CP C+T +
Sbjct: 289 DATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQ---------QTCPTCRTDI 336
>sp|Q21209|BARD1_CAEEL BRCA1-associated RING domain protein 1 OS=Caenorhabditis elegans
GN=brd-1 PE=1 SV=3
Length = 702
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 18/128 (14%)
Query: 53 CELCRKDLAAENCIRLTCYHVYHWSCLNHYARQLPS--TTAPAGYKCPQCKTGLFPPNNL 110
C C+K + +C H Y W C+ + +Q PS ++ A + CP C FP +
Sbjct: 18 CVKCKKPRGDLQYLGSSCKHAYCWECIATF-QQKPSGKRSSVARHMCPSCA---FPLDTS 73
Query: 111 VSPVADVLREKLSSVNWARVGLGLPLLNDEVEHKPSMTSAAKSFVHT---YNKSVEPADV 167
A +L+ + L LND ++ + + F T +NK PAD
Sbjct: 74 KITEAHMLKTCFDT---------LSELNDLLQKVGTTSLTQAEFACTQNIFNKEKTPADA 124
Query: 168 YTSGMSVQ 175
+ Q
Sbjct: 125 VEKFLETQ 132
>sp|Q17551|RPM1_CAEEL E3 ubiquitin-protein ligase rpm-1 OS=Caenorhabditis elegans GN=rpm-1
PE=1 SV=1
Length = 3766
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 48 DYNPTCELCRKD-LAAENCIRLTCYHVYHWSCL 79
D + C +C + L A CIRL C H++H+ C+
Sbjct: 3512 DGDDVCVICFTERLGAAPCIRLGCGHMFHFHCV 3544
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 45 EDSDYNPTCELCRKDLA-AENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTG 103
E+SD + C +C L E+ RL C H++H C++ + KCP C+
Sbjct: 287 EESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLA--------MSKKCPICRVD 338
Query: 104 L 104
+
Sbjct: 339 I 339
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 45 EDSDYNPTCELCRKDLA-AENCIRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTG 103
E+SD + C +C L E+ RL C H++H C++ + KCP C+
Sbjct: 286 EESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLA--------MSKKCPICRVD 337
Query: 104 L 104
+
Sbjct: 338 I 338
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 50 NPTCELCRKDLAA-ENCIRLTCYHVYHWSCLNHYAR 84
N +C +CR D E+ I L C H YH C+N++ +
Sbjct: 285 NESCVICRLDYEDDEDLILLPCKHSYHSECINNWLK 320
>sp|Q6AXW4|PHF7_RAT PHD finger protein 7 OS=Rattus norvegicus GN=Phf7 PE=2 SV=1
Length = 380
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 42 QWLEDSDYNPTCELCRKDLA---AENCIRLTC--YHVYHWSCLNHYARQLPSTTAPAGYK 96
Q + + +C LC +DL+ EN IR C +YH C+ YA T+A +K
Sbjct: 148 QNIHQRSFGESCVLCCEDLSRASVEN-IRSPCCSQAIYHRKCIQKYAH----TSAKHFFK 202
Query: 97 CPQC 100
CPQC
Sbjct: 203 CPQC 206
>sp|Q5NCC9|TRI58_MOUSE Tripartite motif-containing protein 58 OS=Mus musculus GN=Trim58
PE=2 SV=1
Length = 485
Score = 30.8 bits (68), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 66 IRLTCYHVYHWSCLNHYARQLPSTTAPAGYKCPQCKTGL----FPPNNLVSPVADVLRE 120
I + C H + C++ + + S +A Y CPQC+ F PN ++ + D +R+
Sbjct: 26 ISVDCGHSFCLRCISEFCEK--SDSAQGVYACPQCRGPFRPASFRPNRQLASLVDSVRQ 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,563,440
Number of Sequences: 539616
Number of extensions: 3727853
Number of successful extensions: 13182
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 13061
Number of HSP's gapped (non-prelim): 204
length of query: 226
length of database: 191,569,459
effective HSP length: 113
effective length of query: 113
effective length of database: 130,592,851
effective search space: 14756992163
effective search space used: 14756992163
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)