BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15062
(375 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 199/383 (51%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 482 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINT-TTSSMKGALIKAFSQVI 540
Query: 60 KMMW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ +W + G+ V+NT ++ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 541 QELWENDGDHVVNTSSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQ- 599
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+++ S +A W+++ +E S D+FVGQLRSS+RC+ C S + FW+
Sbjct: 600 PIHTDIPDSYSDSMKAAESWKRYLRSEDSTIVDVFVGQLRSSLRCTVCDHVSVTLDPFWD 659
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 660 LSLPIPSRSGTV------------------------------------RLNQCLEHFTRE 683
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K++ + FP G
Sbjct: 684 EVLDGDEKPTCSKCQMRRKCTKSFAIQKFPKILVIHLKRFSPMERFRGKLSVLVDFPLTG 743
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + RV+ TY+L V+NH G T GHYTAYC+ +G W+ Y+D+ V+P
Sbjct: 744 LELSAFAAP---RVQG-CTYNLYGVANHSGTTH-SGHYTAYCKHPYSGEWHEYNDSRVTP 798
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V A++V S+E AY+L Y+++
Sbjct: 799 VSARSVVSSE----AYVLFYEQQ 817
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 196/383 (51%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 638 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSM-KGALIKAFSQVI 696
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+LV+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 697 HELWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQ- 755
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+++ S +A+ W+++ +E S+ D+FVGQLRSS+ C++C S + FW+
Sbjct: 756 PIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWD 815
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 816 LSLPIPARSGTV------------------------------------KLSQCLEHFTRE 839
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 840 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLTG 899
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + + RV TY+L V+NH G T GHYTAYC+ +G W+ Y+D+ VS
Sbjct: 900 LDLSAFAAP---RVPG-CTYNLYGVANHSG-TTHSGHYTAYCKHPYSGEWHEYNDSRVSV 954
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V A++V S E AY+L Y+++
Sbjct: 955 VPARSVVSNE----AYVLFYEQQ 973
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 196/383 (51%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 636 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSM-KGALIKAFSQVI 694
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+LV+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 695 HELWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQ- 753
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+++ S +A+ W+++ +E S+ D+FVGQLRSS+ C++C S + FW+
Sbjct: 754 PIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWD 813
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 814 LSLPIPARSGTV------------------------------------KLSQCLEHFTRE 837
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 838 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLTG 897
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + + RV TY+L V+NH G T GHYTAYC+ +G W+ Y+D+ VS
Sbjct: 898 LDLSAFAAP---RVPG-CTYNLYGVANHSG-TTHSGHYTAYCKHPYSGEWHEYNDSRVSV 952
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V A++V S E AY+L Y+++
Sbjct: 953 VPARSVVSNE----AYVLFYEQQ 971
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 194/382 (50%), Gaps = 60/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL----NEDIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSVLQCLSNT L+ N DI S +G L+ A + +
Sbjct: 577 GLNGLRNIGNTCFMNSVLQCLSNTRPLLEYLVDDKYNSDINTTL-SCMKGALIKAFASVI 635
Query: 60 KMMWSSGNL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
K +W SG+ V+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 636 KELWRSGDRDCVVNTTALKSQVQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPK 695
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ S +A W ++ TE S DIFVGQL+S++RC++C S ++ FW
Sbjct: 696 -PILTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKSTLRCTHCLHDSVTFDPFW 754
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LSLP+P G L L +CL F
Sbjct: 755 DLSLPIPSRTGNL------------------------------------KLQQCLQHFVR 778
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L TC C + +K + + + P VL+L KRFS F K++ ++FP
Sbjct: 779 EEELDGDEKPTCSKCGVRRKCLKWFTVHKFPQVLVLHLKRFSPTERFRGKLSVVVEFPLS 838
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
GLDM + ++ + TY+L AVSNH G T GHYTAYC+ TG W+ Y+D+ V+
Sbjct: 839 GLDMSPFAASP-----THATYNLYAVSNHSG-TTYSGHYTAYCKHPYTGDWHEYNDSRVT 892
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ ++ + SAE AY+L Y+
Sbjct: 893 PIRSRDIVSAE----AYVLFYE 910
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 195/383 (50%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 646 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINT-TTSSMKGALIKAFSQVI 704
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+LV+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 705 HELWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQ- 763
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+++ S +A+ W+++ +E S+ D+FVGQLRSS+ C++C S + FW+
Sbjct: 764 PIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWD 823
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 824 LSLPIPARSGTV------------------------------------KLSQCLEHFTRE 847
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 848 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLTG 907
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + + RV TY+L V+NH G T GHYTAYC+ + W+ Y+D+ VS
Sbjct: 908 LDLSAFAAP---RVPG-CTYNLYGVANHSGTTH-SGHYTAYCKHPYSAEWHEYNDSRVSA 962
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V A++V S E AY+L Y+++
Sbjct: 963 VPARSVVSNE----AYVLFYEQQ 981
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 195/383 (50%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 714 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINT-TTSSMKGALIKAFSQVI 772
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+LV+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 773 HELWEVGGDLVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQ- 831
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+++ S +A+ W+++ +E S+ D+FVGQLRSS+ C++C S + FW+
Sbjct: 832 PIHTDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWD 891
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 892 LSLPIPARSGTV------------------------------------KLSQCLEHFTRE 915
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 916 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLTG 975
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + + RV TY+L V+NH G T GHYTAYC+ + W+ Y+D+ VS
Sbjct: 976 LDLSAFAAP---RVPG-CTYNLYGVANHSGTTH-SGHYTAYCKHPYSAEWHEYNDSRVSA 1030
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V A++V S E AY+L Y+++
Sbjct: 1031 VPARSVVSNE----AYVLFYEQQ 1049
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 196/383 (51%), Gaps = 59/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LL + DI S +G L+ A +
Sbjct: 422 GLNGLKNIGNTCFMNSVIQCLSNTKTLLEYLLQDHYVNDINTTT-SAMKGSLIKAFAEVI 480
Query: 60 KMMWS--SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
K +WS + + V+NT ++ ++ + +F G QQDAQEFL YLL L+E+ V ++
Sbjct: 481 KKLWSQDASDRVVNTSSLKSQIQRFAPRFIGYAQQDAQEFLRYLLEGLHEDVNRVKEKPK 540
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ K S ++ W ++ + S D FVGQL+S+++C++C S ++ FW
Sbjct: 541 -PIITEIDEKLTDSEKSAESWNRYLRMDNSKIVDYFVGQLKSTLKCTHCGHCSVTFDPFW 599
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LSLP+P G Q+R L +CL+ F
Sbjct: 600 DLSLPIPQRAG-----QVR-------------------------------LAQCLDSFTR 623
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
ETL TC CK++ K + IQ+ P +L++ KRFS F K++ + FP E
Sbjct: 624 EETLDGDEKPTCSKCKERRKCTKSFTIQKFPKILVIHLKRFSLAERFRGKLSVTVDFPLE 683
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
GLDM Y A+ R Y+L A+SNH G T GHYTAYCR T W+ Y+D+ VS
Sbjct: 684 GLDMSNY--AADNITPCR--YNLYAISNHSG-TTYSGHYTAYCRHPYTKAWHEYNDSRVS 738
Query: 352 PVDAQTVESAEAEHGAYILVYQR 374
+ ++ + S E AY+L Y++
Sbjct: 739 SISSKAIVSGE----AYVLFYEQ 757
>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
Length = 342
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 203/385 (52%), Gaps = 62/385 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
G+ G+ N GNTC++NS+LQCLSNT A + +L+ I S G+L++A + M+
Sbjct: 1 GVVGLKNLGNTCFMNSILQCLSNTKALTSFVLDNSYSRFISGKSSMHGKLMEAYASLMRS 60
Query: 62 MWSSGN--LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE----AKVVPDQ 115
MW S L+ ++ + +F G QQDAQEFL +LLA L+E+ ++ P
Sbjct: 61 MWKSDTKETALSPATFKSQIQRFAPRFVGYSQQDAQEFLRFLLAGLHEDLLHNSREKPKI 120
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ Y + +A++ W+ +++T+ S +++FVGQL+S++ C+ CK S ++
Sbjct: 121 ISTEEYDELQPED----KAVYCWKLYKSTDDSKVAELFVGQLKSTLECTVCKNQSVTFDP 176
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
FW+LSLP+P + ST+ TL +CL F
Sbjct: 177 FWDLSLPIP---------------------KISTI----------------TLLDCLKLF 199
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS-NFTQKVTSPIKFPR 290
ETL TC CK ++ K +Q+ P +L++ FKRFS ++ K+ + I FP
Sbjct: 200 TREETLSGDNMPTCSKCKTKTVCTKKLSVQKFPQILVIHFKRFSGIHYRTKLNTLIDFPI 259
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
+ LD+ ++ +G Y+L A+SNH G T + GHYTAYC+ T WY+++DT V
Sbjct: 260 DKLDL---LNFAGTTSTISCKYNLYAISNHSGST-VGGHYTAYCKSPHTQTWYMFNDTRV 315
Query: 351 SPVDAQTVESAEAEHGAYILVYQRR 375
PV + V+S++ AY+L Y+++
Sbjct: 316 QPVSSNEVKSSQ----AYVLFYEQQ 336
>gi|195389480|ref|XP_002053404.1| GJ23355 [Drosophila virilis]
gi|194151490|gb|EDW66924.1| GJ23355 [Drosophila virilis]
Length = 906
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 186/377 (49%), Gaps = 59/377 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 570 GLTGLKNLGNTCYMNSILQCLSNTPQLMEFCISDKYKNYISRRNKTNGQVIEEVAALIKE 629
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + +
Sbjct: 630 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTL--------- 680
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
K+ A W +F ++ S+ +F GQ++S+V+C C + S YE F LSL
Sbjct: 681 -RVPRKRDIISAAEKAWLEFTKSQESIIQHLFYGQIKSTVKCVTCTKESATYECFSNLSL 739
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+P Y L++C++ +F+GE +
Sbjct: 740 ELPANANFCY------------------------------------LHQCMDMYFSGEKI 763
Query: 242 HN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ-----KVTSPIKFPREGLDM 295
H C CK + D +K +I +LPPVL++ KRF ++ + K + ++FP E L+M
Sbjct: 764 HGWNCPNCKTKRDAIKKLDISKLPPVLVIHLKRFYADPSNAGAYIKKQNYLQFPLENLEM 823
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ Y + R + TY L AVSNH G T GHYTA+C+ GRWY +DD VVSP+D
Sbjct: 824 KPYTARVESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSAHYGRWYKFDDQVVSPLDT 882
Query: 356 QTVESAEAEHGAYILVY 372
V S+ AYIL Y
Sbjct: 883 SNVVSS----AAYILFY 895
>gi|322801296|gb|EFZ21983.1| hypothetical protein SINV_10772 [Solenopsis invicta]
Length = 886
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 194/383 (50%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 545 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINT-TTSSMKGALIKAFSQVI 603
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+ V+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 604 HELWEVGGDHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLP- 662
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + +A+ W+++ +E S D+FVGQLRSS+RC++C S + FW+
Sbjct: 663 PIHGDIPDSYTDMQKAVESWKRYLRSEDSTIVDVFVGQLRSSLRCTSCDHVSVTLDPFWD 722
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 723 LSLPIPARSGTV------------------------------------KLSQCLEHFTRE 746
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 747 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNVMVDFPLTG 806
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + + RV TY+L V+NH G T GHYTAYC+ +G W+ Y+D+ VS
Sbjct: 807 LDLSAFAAP---RVPG-CTYNLYGVANHSG-TTYSGHYTAYCKHPYSGEWHEYNDSRVSV 861
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V +++V S+E AY+L Y+++
Sbjct: 862 VSSRSVVSSE----AYVLFYEQQ 880
>gi|332018399|gb|EGI58993.1| Ubiquitin carboxyl-terminal hydrolase 2 [Acromyrmex echinatior]
Length = 749
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A
Sbjct: 408 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINT-TTSSMKGALIKAFSQVT 466
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+ V+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 467 HELWEVGGDHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLP- 525
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + +A+ W+++ +E S D+FVGQLRSS+RC++C S + FW+
Sbjct: 526 PIHGDIPDSYTDMQKAVESWKRYLRSEDSTIVDVFVGQLRSSLRCTSCDHVSVTLDPFWD 585
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 586 LSLPIPARSGTV------------------------------------KLSQCLEHFTRE 609
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 610 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNVMVDFPLTG 669
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + + RV TY+L V+NH G T GHYTAYC+ +G W+ Y+D+ VS
Sbjct: 670 LDLSAFAAP---RVPG-CTYNLYGVANHSG-TTYSGHYTAYCKHPYSGEWHEYNDSRVSV 724
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V +++V S+E AY+L Y+++
Sbjct: 725 VSSRSVVSSE----AYVLFYEQQ 743
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 190/381 (49%), Gaps = 60/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--NEDIPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ + +++ L+D +
Sbjct: 60 GLVGLRNLGNTCFMNSILQCLSNTHDLRDYCLRNTHRTDLNNNCRAKAALMDEFAKLTQT 119
Query: 62 MWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG-- 118
+W+S N ++ + ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 120 IWTSASNEAISPSDFKMQIQKYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVKSRAPV 179
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ S + G W K+ +E S D+FVGQL+SS+ CS C STV++ FW+
Sbjct: 180 EDLDHLSEDEKGK----RMWNKYLESEDSKVVDLFVGQLKSSLTCSECGFCSTVFDPFWD 235
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + +L +CL F
Sbjct: 236 LSLPIAKTSGEV------------------------------------SLNDCLRLFTKE 259
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC CK + K + IQ+ P +L+L KRFS T K+++ + FP +
Sbjct: 260 DVLDGNERPTCHRCKTRRKCTKKFTIQKFPKILVLHLKRFSECRVRTSKLSTFVNFPLKE 319
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + AS V + Y+L AVSNH G T+L GHYTAYCR TG WY Y+D+ VSP
Sbjct: 320 LDLREF--ASDNSVNA--VYNLYAVSNHTG-TSLGGHYTAYCRSPCTGEWYTYNDSRVSP 374
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V S++ AY+L Y+
Sbjct: 375 MSSSQVCSSD----AYVLFYE 391
>gi|427778559|gb|JAA54731.1| Putative ubiquitin specific peptidase 2 [Rhipicephalus pulchellus]
Length = 494
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/440 (31%), Positives = 206/440 (46%), Gaps = 87/440 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKS-QGQLVDALVNFMKMMW 63
G+ N GNTC++NS++QCL++T L + I+ + S +G L +A MK +W
Sbjct: 61 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDGYVSEINTSTSSMKGALFEAFATLMKSIW 120
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQYNG 118
S+G ++ +A ++ + +F G QQD+QEFL YLL L+E+ + P
Sbjct: 121 RSSNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITTRPRHLTT 180
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
N S Q +A W+++ + S D FVGQL+S+++CS C S ++ FW+
Sbjct: 181 EIDDNLSESQ----KAAEAWKRYLRYDDSKIVDCFVGQLKSTLKCSVCGHKSVTFDPFWD 236
Query: 179 LSLPVPPGGG--TLYEC----------QLRSSVRCSNCK--------------------- 205
LSLP+P G TL +C CS+CK
Sbjct: 237 LSLPIPKGSDPVTLQQCLSLFTKEEVLDGDEKPTCSHCKTRQKCTKSFTIHRXXXKRYLR 296
Query: 206 ------------------------RTSTVYEIFWELSLPVPPGGG--TLYECLNKFFNGE 239
S ++ FW+LSLP+P G TL +CL+ F E
Sbjct: 297 YDDSKIVDCFVGQLKSTLKCSVCGHKSVTFDPFWDLSLPIPKGSDPVTLQQCLSLFTKEE 356
Query: 240 TLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGL 293
L TC +CK + K + I R P +L+L KRFS + F K+ + ++FP L
Sbjct: 357 VLDGDEKPTCSHCKTRQKCTKSFTIHRCPKILVLHLKRFSPSERFRAKLNTRVEFPLTNL 416
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
D+ Y+S S + Y+L AVSNH G T GHYTA C +G W+ +DT VS V
Sbjct: 417 DLCPYMSNSHYVM-----YNLYAVSNHSGST-YSGHYTATCLHPKSGEWHECNDTKVSEV 470
Query: 354 DAQTVESAEAEHGAYILVYQ 373
A V S+E AY+L Y+
Sbjct: 471 SASRVVSSE----AYVLFYE 486
>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 395
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 192/382 (50%), Gaps = 60/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++N++LQCLSNTP R+ L + + + + L++ ++
Sbjct: 48 GLVGLRNLGNTCFMNTILQCLSNTPDLRDYCLTNVHRLDLGDNCTANTTLMEEFAKLIQS 107
Query: 62 MWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE---AKVVPDQYN 117
+ SG N ++ + ++ Y KF G QQDAQEFL +LL L+ + A V+P + +
Sbjct: 108 LCLSGSNEAISPSDVWKQIQQYGPKFVGCNQQDAQEFLRFLLDGLHNDVNRASVLP-KVS 166
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
G + + ++ W + E S D+FVGQL+SSV C+ C TSTV++ FW
Sbjct: 167 GHDNDHLGDDE----KSKRMWNLYLEREDSKVVDLFVGQLKSSVTCTFCGFTSTVFDPFW 222
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LS+P+P K + V TL +CL F
Sbjct: 223 DLSIPIPAQ------------------KSSEEV----------------TLKDCLRLFTK 248
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPRE 291
+ L C CK + K + IQR P +L+L KRF SS T K+++ + FP +
Sbjct: 249 EDVLDGDESPMCCRCKSRRKCTKRFSIQRFPQILVLHLKRFSDSSVRTSKLSTYVNFPLK 308
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L+M + + G RV TYDL AVSNH G A+ GHYTAYCR G WY Y+D+ VS
Sbjct: 309 ELEMREFATTGGERV----TYDLYAVSNHSG-NAMGGHYTAYCRHPSLGEWYSYNDSRVS 363
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
PV + S+ AY+L Y+
Sbjct: 364 PVSTANIRSS----NAYLLFYE 381
>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
Length = 762
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 194/383 (50%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 421 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINT-TTSSMKGALIKAFSQVI 479
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+ V+NT A+ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 480 HELWEVGGDHVVNTTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKL-P 538
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + +A+ W+++ +E S+ D+FVGQLRSS+ C++C S + FW+
Sbjct: 539 PIHGDIPDSYTDMQKAVESWKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWD 598
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 599 LSLPIPGRSGTV------------------------------------KLSQCLEHFTRE 622
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 623 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNVMVDFPLTG 682
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + + RV TY+L V+NH G T GHYTAYC+ +G W+ Y+D+ VS
Sbjct: 683 LDLSAFAAP---RVPG-CTYNLYGVANHSG-TTYSGHYTAYCKHPYSGEWHEYNDSRVSV 737
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V +++V S+E AY+L Y+++
Sbjct: 738 VSSRSVVSSE----AYVLFYEQQ 756
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 191/381 (50%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ +S+ + L+ +++
Sbjct: 17 GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL 76
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E +V + N
Sbjct: 77 LWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANA 136
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + + ++ W ++Q E S SD+FVGQL+SS+ CS C ST ++ FW+
Sbjct: 137 DTLDHLPDDE----KSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWD 192
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P G G TL +CL F
Sbjct: 193 LSLPIPKKGY-----------------------------------GEVTLMDCLRLFTKE 217
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
+ L TC CK ++ K + IQ+ P +L+L KRFS + K+T+ + FP +
Sbjct: 218 DVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKD 277
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S S Y+L AVSNH G T + GHYTAYC+ + W+ ++D+ V+P
Sbjct: 278 LDLREFASQSCNHA----VYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTP 332
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V S++ AY+L Y+
Sbjct: 333 MSSSHVRSSD----AYLLFYE 349
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 199/379 (52%), Gaps = 44/379 (11%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-IPIHPDSKS--QGQLVDALVNF 58
+ GL G+ N GNTC++NS+LQCLS+T + +NE+ I DS S +G L+ A N
Sbjct: 2 AEGLVGLRNLGNTCFMNSILQCLSHTKQLADYCMNENYIFDLKDSNSSMKGALMKAFANL 61
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
++ MW + ++ A ++ + +F G QQD+QEFL +LL L+++ V +
Sbjct: 62 IRQMWRGSSDAVSPSAFKAQIQKFAPRFVGYNQQDSQEFLRFLLEGLHDDINKVQVKPKP 121
Query: 119 STYSNTSSKQVGSFR-ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
S + +++ R A H W K+ + S +D+FVGQL+S ++C++C+ S ++ FW
Sbjct: 122 SYSDDEEIEKLSDERKARHAWNKYLLRDNSQITDLFVGQLKSVLQCTHCQHCSVTFDPFW 181
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LSLP+P +SS+ +C R EI P
Sbjct: 182 DLSLPIPK----------KSSIDVRDCLRDFVEEEILDGDEKP----------------- 214
Query: 238 GETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS-NFTQKVTSPIKFPREGLDME 296
TC CK + K + +QRLP +L+L KRFS + QK+++ + FP L+++
Sbjct: 215 ------TCSKCKARRKCTKRFFLQRLPKILVLHLKRFSGMRYRQKLSTTVNFPLAKLNLQ 268
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ R + TYDL AVSNH G T GHYTAYC+ TG W+ ++D+ VS + A
Sbjct: 269 EFTCPESRG-SAPATYDLYAVSNHSG-TTFGGHYTAYCKYPTTGDWHCFNDSRVSSISAS 326
Query: 357 TVESAEAEHGAYILVYQRR 375
+V S+E AY+L Y+ R
Sbjct: 327 SVISSE----AYVLFYELR 341
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 191/381 (50%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ +S+ + L+ +++
Sbjct: 209 GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL 268
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E +V + N
Sbjct: 269 LWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRANA 328
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + + ++ W ++Q E S SD+FVGQL+SS+ CS C ST ++ FW+
Sbjct: 329 DTLDHLPDDE----KSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWD 384
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P G G TL +CL F
Sbjct: 385 LSLPIPKKGY-----------------------------------GEVTLMDCLRLFTKE 409
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
+ L TC CK ++ K + IQ+ P +L+L KRFS + K+++ + FP +
Sbjct: 410 DVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLSTFVNFPLKD 469
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S S Y+L AVSNH G T + GHYTAYC+ + W+ ++D+ V+P
Sbjct: 470 LDLREFASQSCNHA----VYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTP 524
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V S++ AY+L Y+
Sbjct: 525 MSSSHVRSSD----AYLLFYE 541
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 185/379 (48%), Gaps = 52/379 (13%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD------SKSQGQLVDALVN 57
G+ G+ N GNTC++NSV+QCLSNT R+ ++ H D S +G L++A N
Sbjct: 69 GIVGLRNLGNTCFMNSVIQCLSNTRLLRDYCRRDE---HKDEVNKTTSNMKGALINAFAN 125
Query: 58 FMKMMWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
M +W + ++ + + K+F G QQDAQEFL+YLL L+E+ V ++
Sbjct: 126 LMHSIWKGAPDTHVSPNDFKSQIARFAKRFVGYNQQDAQEFLMYLLEGLHEDVNRVKEKR 185
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
Y SK V A W+ + S DIFVGQL+SS+ C+ C S ++ F
Sbjct: 186 KNRIYDEDDSKTVS---AQEMWKMYLHQNDSKIVDIFVGQLKSSLTCTGCGHVSDTFDPF 242
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W+LSLP+ G G + L S C T E+ P+
Sbjct: 243 WDLSLPIKKGHGYGNDVSLES------CFELFTSEEVLDGDEKPM--------------- 281
Query: 237 NGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLD 294
C CKK+ K + IQR P VLI+ KRF+ S++ K+++ + FP + L+
Sbjct: 282 --------CSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYRSKLSTMVNFPLQSLE 333
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ + + + + Y+L AVSNH G T GHYTAY + T W+ + DT VS +
Sbjct: 334 LNQF---AAEKNGAPAMYNLFAVSNHSG-TPFGGHYTAYTKHPETSTWHHFSDTRVSQIS 389
Query: 355 AQTVESAEAEHGAYILVYQ 373
V+S+E AY+L Y+
Sbjct: 390 ESQVQSSE----AYVLFYE 404
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 190/379 (50%), Gaps = 55/379 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSN+ R+ L ++ +S+ + L+ +++
Sbjct: 285 GLTGLRNLGNTCFMNSILQCLSNSKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL 344
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E V + ST
Sbjct: 345 LWTSSPNESVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRAST 404
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
++ ++ W ++Q E S SD+FVGQL+SS+ CS C ST ++ FW+LS
Sbjct: 405 --DSLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLS 462
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
LP+P G G TL +CL F +
Sbjct: 463 LPIPKKGY-----------------------------------GEVTLMDCLRLFTKEDV 487
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLD 294
L TC CK ++ K + IQ+ P +L+L KRFS + K+T+ + FP + LD
Sbjct: 488 LDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRSSKLTTFVNFPLKDLD 547
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ + S S Y+L AVSNH G T + GHYTAYC+ + W+ ++D+ V+P+
Sbjct: 548 LREFASQSCNHA----VYNLYAVSNHSG-TTMGGHYTAYCKSPVSSEWHSFNDSRVTPMS 602
Query: 355 AQTVESAEAEHGAYILVYQ 373
+ V S++ AY+L Y+
Sbjct: 603 SSHVRSSD----AYLLFYE 617
>gi|195111414|ref|XP_002000274.1| GI10137 [Drosophila mojavensis]
gi|193916868|gb|EDW15735.1| GI10137 [Drosophila mojavensis]
Length = 908
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 188/381 (49%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 572 GLTGLKNLGNTCYMNSILQCLSNTPQLMEFCVSDKYKNYICRRNKTNGQVIEEVAALIKE 631
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 632 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLRVPRQREVI 691
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F ++ S+ +F GQ++S
Sbjct: 692 SASEKA------------WMEFTKSQESLILHLFYGQIKS-------------------- 719
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY--ECLNKFFN 237
+V+C C + S YE F LSL +P Y +C++ +F+
Sbjct: 720 ------------------TVKCVTCTKESATYECFSNLSLELPANANLCYLNQCMDMYFS 761
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ-----KVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF ++ + K + ++FP +
Sbjct: 762 GEKIHGWNCPNCKTKRDAIKKLDISKLPPVLVIHLKRFYADPSNPGAYIKKQNYLQFPLD 821
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM+ YI+ + R + TY L AVSNH G T GHYTA+C+ GRWY +DD VVS
Sbjct: 822 NLDMKPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSAHYGRWYKFDDQVVS 880
Query: 352 PVDAQTVESAEAEHGAYILVY 372
P+D V S+ AYIL Y
Sbjct: 881 PLDTSNVVSS----AAYILFY 897
>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
Length = 391
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 194/382 (50%), Gaps = 60/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED--IPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT + R+ L+ ++ ++++ L++ ++
Sbjct: 56 GLVGLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLIQT 115
Query: 62 MWSSGNLVLNTKA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
MW+S + + + ++ Y +F G QQDAQEFL +LL L+ E V + G+T
Sbjct: 116 MWTSSSSEAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRGNT 175
Query: 121 --YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + ++ G W K+ E S D+FVGQL+SS+ CS C STV++ FW+
Sbjct: 176 EDFDHLPDEEKGK----KMWSKYLEREDSKIVDLFVGQLKSSLTCSECGYCSTVFDPFWD 231
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G G + +L +C+ F
Sbjct: 232 LSLPIAKGYGEV------------------------------------SLMDCMRLFTKE 255
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC CK + K + +Q+ P +L+L KRFS T K+++ + FP +
Sbjct: 256 DVLDGDEKPTCYRCKARRRCTKKFTVQKFPKILVLHLKRFSEARIRTSKLSTFVNFPMKD 315
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + AS R S Y+L AVSNH G T + GHYTAYC G WY Y+D+ V+P
Sbjct: 316 LDLREF--ASDR--SSSAVYNLYAVSNHSG-TTMGGHYTAYCCNPENGEWYTYNDSRVTP 370
Query: 353 VDAQTVESAEAEHGAYILVYQR 374
+ A V S++ AY+L Y+R
Sbjct: 371 MSASQVRSSD----AYVLFYER 388
>gi|307211269|gb|EFN87455.1| Ubiquitin carboxyl-terminal hydrolase 2 [Harpegnathos saltator]
Length = 342
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 193/383 (50%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GLNG+ N GNTC++NSV+QCLSNT LLNE DI S +G L+ A +
Sbjct: 1 GLNGLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINT-TTSSMKGALIKAFSQVI 59
Query: 60 KMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W G+ V+NT ++ ++ + +F G QQDAQEFL YLL L+E+ V +
Sbjct: 60 HELWEVGGDHVVNTTSLKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKL-P 118
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + + +A+ W+++ +E S+ D+FVGQLRSS+ C++C S + FW+
Sbjct: 119 PIHGDIPDSYTETQKAVESWKRYLRSEDSMVVDVFVGQLRSSLHCTSCDHVSVTLDPFWD 178
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P GT+ L +CL F
Sbjct: 179 LSLPIPARSGTV------------------------------------KLSQCLEHFTRE 202
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + IQ+ P +L++ KRFS F K+ + FP G
Sbjct: 203 EVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNVMVDFPLTG 262
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ SA TY+L V+NH G T GHYTAYC+ +G W+ Y+D+ VS
Sbjct: 263 LDL----SAFAAPKVPGCTYNLYGVANHSG-TTYSGHYTAYCKHPYSGEWHEYNDSRVSV 317
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
V A++V S+E AY+L Y+++
Sbjct: 318 VSARSVVSSE----AYVLFYEQQ 336
>gi|223029565|gb|ACM78504.1| MIP03335p [Drosophila melanogaster]
Length = 367
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 32 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 91
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 92 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 151
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 152 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 179
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 180 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 221
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 222 GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGLYMKKQNYLRFPLE 281
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 282 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 340
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 341 ALDSSNVVSS----AAYILFY 357
>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 394
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 193/380 (50%), Gaps = 58/380 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED--IPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT + R+ L+ ++ +S++ L++ ++
Sbjct: 56 GLVGLKNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNSRTNTALMEEFAKLIQT 115
Query: 62 MWSSGNLVLNTKA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
MW+S + + + ++ Y +F G QQDAQEFL +LL L+ E V + G+
Sbjct: 116 MWTSSSSEAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRGTV 175
Query: 121 --YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + ++ G W K+ E S D+FVGQL+SS+ CS+C STV++ FW+
Sbjct: 176 EDFDHLPDEEKGK----KMWSKYLEREDSKIVDLFVGQLKSSLTCSHCGFCSTVFDPFWD 231
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G G +L +C+ F
Sbjct: 232 LSLPIAKKGY-----------------------------------GEVSLMDCMRLFTKE 256
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQKVTSPIKFPREGL 293
+ L TC CK + K + IQ+ P +L+L KRFS + T K+++ + FP + L
Sbjct: 257 DVLDGDEKPTCYRCKARRRCTKKFTIQKFPKILVLHLKRFSEARRTSKLSTFVNFPMKDL 316
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
D+ + S + Y+L AVSNH G T + GHYTAYCR +G WY ++D+ V+P+
Sbjct: 317 DLREFASENSINA----VYNLYAVSNHSG-TTMGGHYTAYCRNPSSGEWYTFNDSRVTPM 371
Query: 354 DAQTVESAEAEHGAYILVYQ 373
+ V S++ AY+L Y+
Sbjct: 372 SSSQVRSSD----AYVLFYE 387
>gi|194899564|ref|XP_001979329.1| GG24410 [Drosophila erecta]
gi|190651032|gb|EDV48287.1| GG24410 [Drosophila erecta]
Length = 895
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 560 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 619
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 620 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 679
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 680 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 707
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 708 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 749
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 750 GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGAYMKKQNYLRFPLE 809
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 810 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 868
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 869 ALDSSNVVSS----AAYILFY 885
>gi|195569249|ref|XP_002102623.1| GD19401 [Drosophila simulans]
gi|194198550|gb|EDX12126.1| GD19401 [Drosophila simulans]
Length = 896
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 620
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 621 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 680
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 681 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 708
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 709 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 750
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 751 GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGAYMKKQNYLRFPLE 810
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 811 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 869
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 870 ALDSSNVVSS----AAYILFY 886
>gi|195355562|ref|XP_002044260.1| GM15069 [Drosophila sechellia]
gi|194129561|gb|EDW51604.1| GM15069 [Drosophila sechellia]
Length = 896
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 620
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 621 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 680
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 681 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 708
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 709 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 750
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 751 GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGAYMKKQNYLRFPLE 810
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 811 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 869
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 870 ALDSSNVVSS----AAYILFY 886
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 188/379 (49%), Gaps = 55/379 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ +S+ + L+ +++
Sbjct: 110 GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL 169
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E V + ST
Sbjct: 170 LWTSSPNENVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRPRAST 229
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+T ++ W ++Q E S SD+FVGQL+SS+ CS C ST ++ FW+LS
Sbjct: 230 --DTLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLS 287
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
LP+P G TL +CL F +
Sbjct: 288 LPIPKKSY-----------------------------------GEVTLMDCLRLFTKEDV 312
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLD 294
L TC CK ++ K + IQ+ P +L+L KRFS T K+T+ + F + LD
Sbjct: 313 LDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRTSKLTTFVNFQLKDLD 372
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ + S S Y+L AVSNH G T + GHYTAYC+ + W+ ++D+ V+P+
Sbjct: 373 LREFASQSCNHA----VYNLYAVSNHSG-TTMGGHYTAYCKNPVSSEWHSFNDSRVTPMS 427
Query: 355 AQTVESAEAEHGAYILVYQ 373
+ V S++ AY+L Y+
Sbjct: 428 SSHVRSSD----AYLLFYE 442
>gi|28571791|ref|NP_650948.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|28381390|gb|AAF55858.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|384551736|gb|AFH97157.1| FI20021p1 [Drosophila melanogaster]
Length = 896
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 620
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 621 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 680
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 681 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 708
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 709 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 750
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 751 GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLE 810
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 811 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 869
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 870 ALDSSNVVSS----AAYILFY 886
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 186/381 (48%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSSAHTALMEEFAKLIQT 115
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 116 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 175
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ G W K+ E S D+FVGQL+SS+ C+ C STV++ FW+
Sbjct: 176 ENLDRLPDDEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWD 231
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 232 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 256
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 257 DVLDGDEKPTCCRCGARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVSFPLRD 316
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+ V+P
Sbjct: 317 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTP 371
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 372 MSSSQVRTSD----AYLLFYE 388
>gi|21483568|gb|AAM52759.1| SD04548p [Drosophila melanogaster]
Length = 896
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 620
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 621 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 680
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 681 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 708
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 709 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 750
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 751 GERIHGWKCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLE 810
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 811 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 869
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 870 ALDSSNVVSS----AAYILFY 886
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 189/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ +S+ + L+ +++
Sbjct: 125 GLTGLGNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL 184
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E +V + N
Sbjct: 185 LWTSSPNHSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANA 244
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + + ++ W ++Q E S SD+FV QL+SS+ CS C ST ++ FW+
Sbjct: 245 DTLDHLPDDE----KSRQMWRRYQEREDSRVSDLFVAQLKSSLTCSECGYCSTAFDPFWD 300
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P G G TL +CL F
Sbjct: 301 LSLPIPKKGY-----------------------------------GEVTLMDCLRLFTKE 325
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
+ L TC CK ++ K + IQ+ P +L+L KRFS + K+T+ + FP +
Sbjct: 326 DVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKD 385
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S S Y+L AVSNH G T + GHYTAYC+ + W+ ++D+ V+P
Sbjct: 386 LDLREFASQSCNHA----VYNLYAVSNHSGAT-MGGHYTAYCKSPISSEWHSFNDSRVTP 440
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y
Sbjct: 441 MSSSHVPTSD----AYLLFYD 457
>gi|386766198|ref|NP_001247227.1| UBPY ortholog, isoform B [Drosophila melanogaster]
gi|371941032|gb|AEX60474.1| FI18309p1 [Drosophila melanogaster]
gi|383292853|gb|AFH06545.1| UBPY ortholog, isoform B [Drosophila melanogaster]
Length = 367
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 32 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 91
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 92 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 151
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 152 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 179
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 180 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 221
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 222 GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLE 281
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 282 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 340
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 341 ALDSSNVVSS----AAYILFY 357
>gi|262360004|gb|ACY56907.1| RH33842p [Drosophila melanogaster]
Length = 896
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 185/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 620
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L + + VP Q
Sbjct: 621 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLRSDLQTLHVPRQREMI 680
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 681 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 708
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 709 ------------------TVKCVACHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 750
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPVL++ KRF +S K + ++FP E
Sbjct: 751 GERIHGWNCPSCKTKRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLE 810
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 811 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 869
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 870 ALDSSNVVSS----AAYILFY 886
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 190/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ +S+ + L+ +++
Sbjct: 44 GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTPLMSEFAKLIQL 103
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E +V + N
Sbjct: 104 LWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANA 163
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + + ++ W ++Q E S SD+FVGQL+SS+ CS C ST ++ FW+
Sbjct: 164 DTLDHLPDDE----KSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWD 219
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P G G TL +CL F
Sbjct: 220 LSLPIPKKGY-----------------------------------GEVTLMDCLRLFTKE 244
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
+ L TC CK ++ K + IQ+ P +L+L KRFS + K+T+ + FP +
Sbjct: 245 DVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKD 304
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S S Y+L AV+NH G T + GHYTAYC+ W+ ++D+ V+P
Sbjct: 305 LDLREFASQSCNHA----VYNLYAVANHSG-TTMGGHYTAYCKEPHLQEWHSFNDSRVTP 359
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V S++ AY+L Y+
Sbjct: 360 MSSSHVRSSD----AYLLFYE 376
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 194/384 (50%), Gaps = 63/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD---SKSQGQLVDALVNFMK 60
GLNG+ N GNTC++NSVLQCLSNT LL+E+ + S +G L+ A N ++
Sbjct: 120 GLNGLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEEYMTDINFTISAMKGSLIKAFSNVIQ 179
Query: 61 MMWS--SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK---VVPDQ 115
+W+ + + ++NT ++ + +F G QQDAQEFL YLL L+E+ V P Q
Sbjct: 180 ELWAPNAEDKIINTTNFKSQIQKFAPRFMGYAQQDAQEFLRYLLEGLHEDVNRVTVKPQQ 239
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ S Q +A W+++ + S DIFVGQL+S+++C+ C S ++
Sbjct: 240 ILTDIDDSLSDNQ----KATEAWKRYLRMDDSKVVDIFVGQLKSTLQCTVCGHCSVTFDP 295
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
FW+LSLPVP RT G L CL+ F
Sbjct: 296 FWDLSLPVP--------------------SRT----------------GQPKLQSCLDAF 319
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFP 289
E L TC C+ + K + IQ+ P +L+L KRFS + K++ + FP
Sbjct: 320 TKEEVLDGEEKPTCSKCETRRKCTKSFSIQKFPKILVLHLKRFSPTERYRGKLSITVDFP 379
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ Y + G+ TY+L A+SNH G TA GHYTAYC+ +G W+ Y+D+
Sbjct: 380 LTNLDLSPYAANKGQGC----TYNLYAISNHSG-TAYGGHYTAYCKHPYSGNWHEYNDSR 434
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
VS + +++V S E AY+L Y+
Sbjct: 435 VSSLSSRSVVSGE----AYVLFYE 454
>gi|195498419|ref|XP_002096515.1| GE25711 [Drosophila yakuba]
gi|194182616|gb|EDW96227.1| GE25711 [Drosophila yakuba]
Length = 895
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 186/381 (48%), Gaps = 67/381 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 560 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 619
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 620 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 679
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S
Sbjct: 680 SASEKA------------WLEFTKAKESMILHLFYGQMKS-------------------- 707
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFN 237
+V+C C + S YE F LSL +PP L +C++ +F+
Sbjct: 708 ------------------TVKCVVCHKESATYESFSNLSLELPPNSNVCQLNQCMDMYFS 749
Query: 238 GETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFPRE 291
GE +H C CK + D +K +I +LPPV+++ KRF +S K + ++FP E
Sbjct: 750 GERIHGWNCPNCKTKRDAIKKLDISKLPPVMVVHLKRFYADPSNSGAYMKKQNYLRFPLE 809
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM YI+ + R + TY L AVSNH G T GHYTA+C+ G+W+ +DD VVS
Sbjct: 810 NLDMNPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGKWFKFDDQVVS 868
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+D+ V S+ AYIL Y
Sbjct: 869 ALDSSNVVSS----AAYILFY 885
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 190/379 (50%), Gaps = 54/379 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ +S+ Q L+ ++
Sbjct: 325 GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRDLNNNSRMQMNLMAEFAKLIQA 384
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E + + G +
Sbjct: 385 LWTSSPNESVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRILVRPKGGS 444
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S++ + W ++ E S D+FVGQL+SS+ CS C ST ++ FW+LS
Sbjct: 445 -SDSLDHLPDEEKGRQMWMRYLAREDSRIGDLFVGQLKSSLTCSVCGHCSTAFDPFWDLS 503
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
LP+ + + E++L +CL F +
Sbjct: 504 LPI--------------------------AKKSYGEVNLA---------DCLRLFTKEDI 528
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLD 294
L TC +CK ++ K + IQR P +L+L KRFS + K+T+ + FP + LD
Sbjct: 529 LDGDEKPTCCHCKARTKCTKKFSIQRFPKILVLHLKRFSEARIRSSKLTTFVNFPLKDLD 588
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ + S S Y+L AVSNH G T + GHYTAYC+ +G W+ ++D+ V+P+
Sbjct: 589 LREFASQSCNHA----VYNLYAVSNHSG-TTMGGHYTAYCKNPVSGEWHAFNDSRVTPLS 643
Query: 355 AQTVESAEAEHGAYILVYQ 373
A V S++ AY+L Y+
Sbjct: 644 ASHVRSSD----AYLLFYE 658
>gi|348668895|gb|EGZ08718.1| hypothetical protein PHYSODRAFT_564649 [Phytophthora sojae]
Length = 583
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 194/388 (50%), Gaps = 29/388 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++NS LQC+SN PA F L +I + S ++G L +A + +
Sbjct: 202 GLVGLQNLGNTCFMNSCLQCVSNLPAIVRYFHPGLFAREI--NESSPTKGALANAFGDLI 259
Query: 60 KMMWSSGNLVLNTKAILL--ALRSYTKKFDGNQQQDAQEFLLYLLAALNEE---AKVVPD 114
K +W+ G+ T+ + L + +F G QQDAQEFL +LL L+E+ K P
Sbjct: 260 KALWT-GDKFTATRPVELKRVIGKVASRFTGYDQQDAQEFLRFLLDGLHEDLNRVKKKPA 318
Query: 115 QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
Y + + V YW+ + AS S++F GQLRS +RC C S ++
Sbjct: 319 YYEIKDRPDAKDRDVSD----EYWKFYLERNASALSELFCGQLRSEIRCETCNHRSLCFD 374
Query: 175 IFWELSLPVP-PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+FW+LSLPVP + LR S + RT++ S GG ++++CL
Sbjct: 375 VFWDLSLPVPKKSSKSSASSHLRISSSFFSGGRTTSASTDSSSSSSSPGAGGMSIHDCLK 434
Query: 234 KFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQ-KVTSPIK 287
+ E L + C CK K + RLP VL+L KRFS S F++ KV++ I
Sbjct: 435 AYTEQEFLSDDAAYYCSKCKTHRSAAKKISVYRLPNVLVLHLKRFSFSTFSRDKVSTSIS 494
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP + LD+ Y S S V+ YDL + +H+G GHYTA C W+ ++D
Sbjct: 495 FPAQSLDLAEYCS-SDAVVDGSTLYDLTGIVHHMGSLN-GGHYTAECLNADMQEWFDFND 552
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ V+ + + S+ AY+L YQRR
Sbjct: 553 SSVTAIKKPELYSS----SAYMLFYQRR 576
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 188/383 (49%), Gaps = 63/383 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 273 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQT 332
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 333 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV------TV 386
Query: 121 YSNTSSKQVGSF----RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
S + + + W K+ E S D+FVGQL+SS+ C++C STV++ F
Sbjct: 387 RPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 446
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W+LSLP+ G + E+ TL +C+ F
Sbjct: 447 WDLSLPIAKRG--------------------------YPEV---------TLMDCMRLFT 471
Query: 237 NGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPR 290
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 472 KEDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPL 531
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V
Sbjct: 532 RDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSV 586
Query: 351 SPVDAQTVESAEAEHGAYILVYQ 373
+P+ + V +++ AY+L Y+
Sbjct: 587 TPMSSSQVRTSD----AYLLFYE 605
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 188/379 (49%), Gaps = 55/379 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQT 115
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 116 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSP 175
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ R + W K+ E S D+FVGQL+SS+ C++C STV++ FW+LS
Sbjct: 176 ENLDHLPDDEKGRQM--WRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLS 233
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
LP+ G + E+ TL +C+ F +
Sbjct: 234 LPIAKRG--------------------------YPEV---------TLMDCMRLFTKEDV 258
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLD 294
L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP LD
Sbjct: 259 LDGDEKPTCYRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLD 318
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P+
Sbjct: 319 LREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMS 373
Query: 355 AQTVESAEAEHGAYILVYQ 373
+ V +++ AY+L Y+
Sbjct: 374 SSQVRTSD----AYLLFYE 388
>gi|195038203|ref|XP_001990549.1| GH18183 [Drosophila grimshawi]
gi|193894745|gb|EDV93611.1| GH18183 [Drosophila grimshawi]
Length = 901
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 185/376 (49%), Gaps = 64/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 572 GLTGLKNLGNTCYMNSILQCLSNTPQLMEFCISDKYRNYISRRNKTNGQVIEEVAALIKE 631
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q +
Sbjct: 632 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLNVPRQRDVI 691
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F ++ S+ +F GQ++S+V+C C + S YE F L
Sbjct: 692 SASEKA------------WLEFTKSQESLILHLFYGQIKSTVKCITCNKESATYECFSNL 739
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SL +PP Y L +C++ +F+GE
Sbjct: 740 SLELPPNANLCY------------------------------------LNQCMDMYFSGE 763
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDME 296
+H C CK + D +K +I +LPPV F +SN K + ++FP + L+M+
Sbjct: 764 KIHGWNCPNCKTKRDAIKKLDISKLPPV----FYADTSNTGAYIKKQNYLQFPLDNLEMK 819
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI+ + R + TY L AVSNH G GHYTA+C+ GRWY +DD +VSP++
Sbjct: 820 PYIARAESRTVTPKTYQLYAVSNHYGSME-GGHYTAFCKSANYGRWYKFDDQIVSPLETS 878
Query: 357 TVESAEAEHGAYILVY 372
V S+ AYIL Y
Sbjct: 879 NVVSS----AAYILFY 890
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 189/384 (49%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYVRDLHHSSNAHTALVEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL-NEEAKVVP-DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L NE +V P + N
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPKSNP 385
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 386 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 419
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 420 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 463
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 523
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 524 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 578
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 579 VTPMSSSQVRTSD----AYLLFYE 598
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 188/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ ++ V +++ AY+L Y+
Sbjct: 578 VTPMSSRQVRTSD----AYLLFYE 597
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 22 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 81
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 82 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 141
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 142 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 175
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 176 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 219
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 220 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 279
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 280 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 334
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 335 VTPMSSSQVRTSD----AYLLFYE 354
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 22 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 81
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 82 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 141
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 142 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 175
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 176 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 219
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 220 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 279
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 280 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 334
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 335 VTPMSSSQVRTSD----AYLLFYE 354
>gi|195446147|ref|XP_002070649.1| GK12180 [Drosophila willistoni]
gi|194166734|gb|EDW81635.1| GK12180 [Drosophila willistoni]
Length = 925
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 182/379 (48%), Gaps = 63/379 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLS+TP + + I +K+ GQ+++ + +K
Sbjct: 589 GLTGLKNLGNTCYMNSILQCLSHTPQLTEYCITDKYKNYISRSNKTNGQVIEEVAALIKE 648
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + +
Sbjct: 649 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTL--------- 699
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N K+ + W +F + S+ +F GQ++S
Sbjct: 700 -NVKQKRETITASEKAWMEFTKAKESLILHLFYGQMKS---------------------- 736
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY--ECLNKFFNGE 239
+V+C C R S YE F LSL +P Y +C++ +F+GE
Sbjct: 737 ----------------TVKCVTCNRESATYECFSNLSLELPENKELCYLNQCMDMYFSGE 780
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ-----KVTSPIKFPREGL 293
+H C CK + + +K +I +LPPVL++ KRF ++ Q K + ++FP E L
Sbjct: 781 RIHGWNCPNCKTKREAIKKLDISKLPPVLVVHLKRFHADPIQSGAYTKKQNYLRFPLENL 840
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+M YI+ + R + Y L AVSNH G T GHYTA+C+ RWY +DD +VS +
Sbjct: 841 EMTPYIARAESRTVTPKIYQLYAVSNHYG-TMEGGHYTAFCKSANYKRWYKFDDQIVSTL 899
Query: 354 DAQTVESAEAEHGAYILVY 372
D +V S+ AYIL Y
Sbjct: 900 DTSSVVSS----AAYILFY 914
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 115
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 116 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 175
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 176 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 209
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 210 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 253
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 254 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 313
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 314 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 368
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 369 VTPMSSSQVRTSD----AYLLFYE 388
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 8 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 67
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 68 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 127
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 128 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 161
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 162 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 205
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 206 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 265
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 266 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 320
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 321 VTPMSSSQVRTSD----AYLLFYE 340
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 27 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 86
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 87 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 146
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 147 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 180
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 181 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 224
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 225 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 284
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 285 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 339
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 340 VTPMSSSQVRTSD----AYLLFYE 359
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 578 VTPMSSSQVRTSD----AYLLFYE 597
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 34 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 93
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 94 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 153
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 154 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 187
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 188 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 231
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 232 TKEDVLDGDAAPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 291
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 292 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 346
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 347 VTPMSSSQVRTSD----AYLLFYE 366
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 578 VTPMSSSQVRTSD----AYLLFYE 597
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 578 VTPMSSSQVRTSD----AYLLFYE 597
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 186/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ V +++ AY+L Y+
Sbjct: 578 VTPMSPSQVRTSD----AYLLFYE 597
>gi|193700037|ref|XP_001944500.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Acyrthosiphon pisum]
Length = 565
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 185/381 (48%), Gaps = 61/381 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ GI N GNTCY+NSVLQCLSNT + + +L +D+ + G+L+ + + +W
Sbjct: 231 GVVGIRNIGNTCYMNSVLQCLSNTKSLTDSVL-DDV-----DGADGKLIRVYRDLLSRIW 284
Query: 64 S-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
+ S + ++T A A + + +F G +QQDAQEFL LL L+ + V +
Sbjct: 285 TASDSHPVDTTAFKSAFQRLSPRFAGYEQQDAQEFLRLLLDRLHMDVNRV--KVKPRAMP 342
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
+ + A +W+++ T+ S D+F GQL
Sbjct: 343 DVDETLKDNALAAEFWQRYLVTDNSTVVDLFAGQL------------------------- 377
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT----LYECLNKFFNG 238
+S++ CS+C S +E+FW++SLP+P G T + + L+ F
Sbjct: 378 -------------KSTLECSSCGHKSITFEVFWDVSLPLPSSGSTNIVSINDLLHNFTQE 424
Query: 239 ETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT-QKVTSPIKFPREGL 293
E L C CK + K Y QRLP L+L KRF + +K+TS + FP L
Sbjct: 425 EVLDFRERPRCSVCKVDRKMFKSYRFQRLPRYLVLHLKRFQGTQSYKKITSLVAFPSVSL 484
Query: 294 DMEYYISASGRRVESRY-TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
DM Y+S + R ++ Y+L AVSNH G T + GHYTA C+ TG W ++D+ VS
Sbjct: 485 DMSPYVSGTARSIQPHACKYNLYAVSNHTG-TPIAGHYTAMCKHPVTGDWNFFNDSSVSR 543
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ T + + AYIL Y+
Sbjct: 544 I---TSSAKLISNEAYILFYE 561
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + L++ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 578 VTPMSSSQVRTSD----AYLLFYE 597
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + L++ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSSNAHTALMEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 578 VTPMSSSQVRTSD----AYLLFYE 597
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 190/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 273 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 332
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 333 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 392
Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 393 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 448
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 449 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 473
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 474 DILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 533
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 534 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 588
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 589 MSSSQVRTSD----AYLLFYE 605
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 190/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 279 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 338
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 339 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 398
Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 399 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 454
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 455 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 479
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 480 DILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 539
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 540 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 594
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 595 MSSSQVRTSD----AYLLFYE 611
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 190/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 53 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 112
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 113 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 172
Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 173 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 228
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 229 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 253
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 254 DILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 313
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 314 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 368
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 369 MSSSQVRTSD----AYLLFYE 385
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 190/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 115
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 116 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 175
Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 176 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 231
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 232 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 256
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 257 DILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 316
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 317 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 371
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 372 MSSSQVRTSD----AYLLFYE 388
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 190/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 13 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 72
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 73 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 132
Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 133 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 188
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 189 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 213
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 214 DILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 273
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 274 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 328
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 329 MSSSQVRTSD----AYLLFYE 345
>gi|195157880|ref|XP_002019822.1| GL12603 [Drosophila persimilis]
gi|194116413|gb|EDW38456.1| GL12603 [Drosophila persimilis]
Length = 901
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 182/379 (48%), Gaps = 63/379 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP L++ I +K+ GQ+++ + +K
Sbjct: 561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCLSDKYKNYISRSNKTNGQVIEEVAALIKE 620
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W+ + ++ + + Y F G QQD+ EFL L+ L+ + + + + S
Sbjct: 621 LWNGQYKCVASRDLRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTL----DVSRM 676
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
T +G+ A W F + S+ +F GQ++S
Sbjct: 677 RET----IGA--AEQAWLDFTKAKESIILHLFYGQMKS---------------------- 708
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECLNKFFNGE 239
+V+C C + S YE F LSL +PP L +C++ +F+GE
Sbjct: 709 ----------------TVKCVTCNKESATYECFSNLSLELPPNANECQLNQCMDMYFSGE 752
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ-----KVTSPIKFPREGL 293
+ C CK + +K +I +LPPVL++ KRF ++ + K + + FP + L
Sbjct: 753 RIQGWNCPNCKTKRAAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNL 812
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+M YI+ + R TY L AVSNH G T GHYTA+C+ GRWY +DD VVS +
Sbjct: 813 EMSPYIARAESRAAKPKTYQLYAVSNHYG-TMEGGHYTAFCKSPNYGRWYKFDDQVVSTL 871
Query: 354 DAQTVESAEAEHGAYILVY 372
D V S+ AYIL Y
Sbjct: 872 DTSNVISS----AAYILFY 886
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 187/377 (49%), Gaps = 51/377 (13%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 38 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 97
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 98 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 157
Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 158 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 213
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G V +C R T +I P
Sbjct: 214 LSLPIAKRG--------YPEVTLMDCMRLFTKEDILDGDEKP------------------ 247
Query: 239 ETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP LD+
Sbjct: 248 -----TCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLR 302
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P+ +
Sbjct: 303 EFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSS 357
Query: 357 TVESAEAEHGAYILVYQ 373
V +++ AY+L Y+
Sbjct: 358 QVRTSD----AYLLFYE 370
>gi|198455403|ref|XP_001359977.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198133229|gb|EAL29129.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 901
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 182/379 (48%), Gaps = 63/379 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP L++ I +K+ GQ+++ + +K
Sbjct: 561 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCLSDKYKNYISRSNKTNGQVIEEVAALIKE 620
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W+ + ++ + + Y F G QQD+ EFL L+ L+ + + + + S
Sbjct: 621 LWNGQYKCVASRDLRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTL----DVSRM 676
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
T +G+ A W F + S+ +F GQ++S
Sbjct: 677 RET----IGA--AEQAWLDFTKAKESIILHLFYGQMKS---------------------- 708
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECLNKFFNGE 239
+V+C C + S YE F LSL +PP L +C++ +F+GE
Sbjct: 709 ----------------TVKCVTCNKESATYECFSNLSLELPPNANECQLNQCMDMYFSGE 752
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ-----KVTSPIKFPREGL 293
+ C CK + +K +I +LPPVL++ KRF ++ + K + + FP + L
Sbjct: 753 RIQGWNCPNCKTKRAAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNL 812
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+M YI+ + R TY L AVSNH G T GHYTA+C+ GRWY +DD VVS +
Sbjct: 813 EMSPYIARAESRAAKPKTYQLYAVSNHYG-TMEGGHYTAFCKSPNYGRWYKFDDQVVSTL 871
Query: 354 DAQTVESAEAEHGAYILVY 372
D V S+ AYIL Y
Sbjct: 872 DTSNVISS----AAYILFY 886
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 182/374 (48%), Gaps = 61/374 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 13 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 72
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 73 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 132
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 133 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 166
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 167 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 210
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 211 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 270
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 271 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 325
Query: 350 VSPVDAQTVESAEA 363
V+P+ + V +++A
Sbjct: 326 VTPMSSSQVRTSDA 339
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 186/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+ S+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKGSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLRLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 578 VTPMSSSQVRTSD----AYLLFYE 597
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 189/377 (50%), Gaps = 51/377 (13%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 71 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 130
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 131 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 190
Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 191 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 246
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G V +C R T +I +G
Sbjct: 247 LSLPIAKRG--------YPEVTLMDCMRLFTKEDI----------------------LDG 276
Query: 239 ETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
+ TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP LD+
Sbjct: 277 DE-KPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLR 335
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P+ +
Sbjct: 336 EFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSS 390
Query: 357 TVESAEAEHGAYILVYQ 373
V +++ AY+L Y+
Sbjct: 391 QVRTSD----AYLLFYE 403
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 185/381 (48%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ + +S L++ +
Sbjct: 57 GLVGLRNLGNTCFMNSILQCLSNTLELRDYCLRNCHITDLNNNCRSNTALIEEFAKLTQS 116
Query: 62 MWSSGN-LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W+S N ++ ++ KF G QQDAQEFL +LL L+ E V + S
Sbjct: 117 LWTSANNEPISPSEFRNQVQRCAPKFVGCNQQDAQEFLRFLLDGLHNEVNRVTVRPKVSV 176
Query: 121 --YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + + + G W + E S D+FVGQL+SS+ C+ C STV++ FW+
Sbjct: 177 LDFDHLADDEKGR----RMWNMYLAREDSKVVDLFVGQLKSSLTCTACGFRSTVFDPFWD 232
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LS+P+ ++ S G TL +CL F
Sbjct: 233 LSIPI--------------------AQKIS---------------GEVTLKDCLRLFTKE 257
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
+ L TC CK + K + IQ+ P +L+L KRFS + + K+++ + FP +
Sbjct: 258 DVLDGEERPTCTKCKARRKCTKRFSIQKFPQILVLHLKRFSDSNVRASKLSTYVNFPLKD 317
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S R Y+L AVSNH G AL GHYTAYC+ G WY Y+D+ VSP
Sbjct: 318 LDLREFASEPSERP----VYNLYAVSNHSG-NALGGHYTAYCKNPALGEWYSYNDSRVSP 372
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V S+ AY+L Y+
Sbjct: 373 MSSSQVRSS----NAYVLFYE 389
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 187/381 (49%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 386 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 441
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 442 LSLPIAKRG--------------------------YPEV---------TLTDCMRLFTKE 466
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 467 DVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 526
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 527 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 581
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 582 MSSSQVRTSD----AYLLFYE 598
>gi|194764571|ref|XP_001964402.1| GF23156 [Drosophila ananassae]
gi|190614674|gb|EDV30198.1| GF23156 [Drosophila ananassae]
Length = 899
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 181/379 (47%), Gaps = 63/379 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +++ GQ+++ + +K
Sbjct: 564 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKSYISRSNRTNGQVIEEVAALIKE 623
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + + T
Sbjct: 624 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVARQRETI 683
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
S + W +F + S+ +F GQ++S
Sbjct: 684 SASEKA----------WLEFTKAKESMILHLFYGQIKS---------------------- 711
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECLNKFFNGE 239
+V+C C + S YE F LSL +PP L +C++ +F+GE
Sbjct: 712 ----------------TVKCVACNKESATYECFSNLSLELPPNSNVCQLNQCMDMYFSGE 755
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ-----KVTSPIKFPREGL 293
+ C C + D +K +I +LPPVL++ KRF ++ K + ++FP + L
Sbjct: 756 RIQGWNCPNCNTKRDAIKKLDISKLPPVLVVHLKRFYADPGNTGAYIKKQNYLRFPLDNL 815
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+M YI+ + R + TY L AVSNH G T GHYTA+C+ GRW+ +DD +VS +
Sbjct: 816 EMTPYIARAESRAVTPKTYQLYAVSNHYG-TMEGGHYTAFCKSANYGRWFKFDDQIVSAL 874
Query: 354 DAQTVESAEAEHGAYILVY 372
D V S+ AYIL Y
Sbjct: 875 DTSNVVSS----AAYILFY 889
>gi|301104609|ref|XP_002901389.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262100864|gb|EEY58916.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 563
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 192/392 (48%), Gaps = 48/392 (12%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++NS LQC+SN PA F L +I + S ++G L A + +
Sbjct: 193 GLVGLQNLGNTCFMNSCLQCVSNLPALVKYFHPGLYAREI--NDTSPTKGALATAFGDLI 250
Query: 60 KMMWSSGNLVLNTKAILL--ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PD 114
K + + G+ T+ + L + ++ G QQDAQEFL +LL L+E+ V P
Sbjct: 251 KALRT-GDKFTATRPVELKRVIGKIASRYTGYDQQDAQEFLRFLLDGLHEDLNRVRRKPA 309
Query: 115 QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
Y + V YW+ + AS S++F GQLRS +RC C S ++
Sbjct: 310 YYEIKDRPEAKDRDVSD----EYWKFYLERNASTLSELFCGQLRSEIRCETCNHRSLCFD 365
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT-----LY 229
+FW+LSLPVP G S++R S+ F+ G T ++
Sbjct: 366 VFWDLSLPVPKKIGK------NSTMRISSG---------FFSGGRTASASGDTASAMSIH 410
Query: 230 ECLNKF----FNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQ-KVT 283
+CL + F G+ CQ CK + K + RLP VL+L KRFS S F++ KV+
Sbjct: 411 DCLKAYTEQEFLGDDAAYYCQKCKTHRSVAKKISVYRLPNVLVLHLKRFSYSTFSRDKVS 470
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ I FP + LD+ Y AS V+ YDL + +H+G + GHYTA C T W+
Sbjct: 471 TSISFPAQSLDIAEYC-ASDAVVDGSTLYDLTGIVHHMG-SLNGGHYTAECLNADTQEWF 528
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D V+ + + S+ AY+L YQRR
Sbjct: 529 DFNDGSVTAIKKPELYSS----SAYMLFYQRR 556
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 187/377 (49%), Gaps = 51/377 (13%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S L++ ++
Sbjct: 55 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQT 114
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 115 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 174
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 175 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 230
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G V ++C R T ++ +G
Sbjct: 231 LSLPIAKRG--------YPEVTLTDCMRLFTKEDV----------------------LDG 260
Query: 239 ETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
+ TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP LD+
Sbjct: 261 DE-KPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLR 319
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P+ +
Sbjct: 320 EFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSS 374
Query: 357 TVESAEAEHGAYILVYQ 373
V +++ AY+L Y+
Sbjct: 375 QVRTSD----AYLLFYE 387
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 186/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNT ++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 8 GLAGLRNLGNTXFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 67
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 68 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 127
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 128 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 161
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 162 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 205
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 206 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 265
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 266 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 320
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 321 VTPMSSSQVRTSD----AYLLFYE 340
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 186/382 (48%), Gaps = 63/382 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NS+LQCLSNT R+ L + ++++ L++ + +W
Sbjct: 57 GLVGLRNLGNTCFMNSILQCLSNTSELRDYCLRNVHRLDVNNRTNAALMEEFAKLTQSLW 116
Query: 64 SSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST-- 120
+S N+ ++ ++ KF G QQDAQEFL LL L+ E V + S
Sbjct: 117 TSVNIEAISPSDFRSEIQRVAPKFVGCNQQDAQEFLRSLLDGLHNEVNRVTVRPRSSVED 176
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ + S ++ ++ W + E S D+FVGQL+
Sbjct: 177 FDHYSDEE----KSKRMWNLYLAREDSKVVDLFVGQLK---------------------- 210
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP---PGGGTLYECLNKFFN 237
SS+ C+ C ST+++ FW+LS+P+ PG TL +CL F
Sbjct: 211 ----------------SSLTCTVCGFRSTMFDPFWDLSIPIAQERPGEVTLKDCLRLFTK 254
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPRE 291
+ L TC CK + K + IQ+ P +L++ KRFS + ++ K+++ + FP +
Sbjct: 255 EDVLDGEEKPTCNKCKARRKCTKRFSIQKFPQILVIHLKRFSDSNSRSSKLSTFVNFPLK 314
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + + + Y+L AVSNH G T L GHYTAYCR G WY Y+D+ VS
Sbjct: 315 ELDLREFSADNSEHP----VYNLYAVSNHTGNT-LGGHYTAYCRNPALGEWYSYNDSRVS 369
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V ++ AY+L Y+
Sbjct: 370 PISSGQVRTS----NAYVLFYE 387
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 191/381 (50%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++NS+LQCLSNT R+ L D+ H S G L++ +
Sbjct: 271 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL-SHTSSVHTG-LMEEFAKLI 328
Query: 60 KMMWSS-GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ +W+S N V++ ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 329 QTIWTSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAVRPK- 387
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
S++ N + W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 388 SSHENLD-HLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 446
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 447 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 471
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + IQR P +L+L KRFS + T K+++ + FP
Sbjct: 472 DILDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLRD 531
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 532 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 586
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 587 MSSSQVRTSD----AYLLFYE 603
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S++ L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV----TARP 381
Query: 121 YSNTSSKQ--VGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SNT + + W K+ E S D+FVGQ
Sbjct: 382 KSNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQ---------------------- 419
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 420 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEVTLMDCMRLF 463
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC +C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 464 TKEDVLDGDEKPTCCHCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFP 523
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 524 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 578
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
VSP+ + V +++ AY+L Y+
Sbjct: 579 VSPMSSSQVRTSD----AYLLFYE 598
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 191/381 (50%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++NS+LQCLSNT R+ L D+ H S G L++ +
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLS-HTSSVHTG-LMEEFAKLI 113
Query: 60 KMMWSS-GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ +W+S N V++ ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 114 QTIWTSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAVR-PK 172
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
S++ N + W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 173 SSHENLDHLPDDE-KGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 231
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 232 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 256
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + IQR P +L+L KRFS + T K+++ + FP
Sbjct: 257 DILDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLRD 316
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 317 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 371
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 372 MSSSQVRTSD----AYLLFYE 388
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 183/374 (48%), Gaps = 46/374 (12%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS-QGQLVDALVNFMKMM 62
GL G+ N GNTC++NS+LQCLSNT R+ L SK +++ ++ +
Sbjct: 44 GLVGLRNLGNTCFMNSILQCLSNTKDLRDYCLQNSYRRDLSSKKCNTAIMEEFARLLQAI 103
Query: 63 W-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 104 WTSSANEVVSPSEFKTQIQKYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVTVKPRPS-- 161
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
S S + H W+++ E S ++FVGQL+SS+ C+ C STV++ FW+LSL
Sbjct: 162 SQDLDHMPDSEKGKHMWKRYLEREDSRIVELFVGQLKSSLTCTECGYCSTVFDPFWDLSL 221
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
P+ S V +C R T ++ P
Sbjct: 222 PIAKKSA--------SEVSLVDCMRLFTKEDVLDGDEKP--------------------- 252
Query: 242 HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEYYI 299
TC CK + K + IQ+ P +L+L KRFS + K+++ + FP + LD+ +
Sbjct: 253 --TCCRCKARRRCTKKFTIQKFPKILVLHLKRFSEGRIRSGKLSTFVNFPLKDLDLREFS 310
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
S S TY+L AVSNH G T + GHYTAYC+ G WY ++D+ V+ + + V
Sbjct: 311 SESNPHA----TYNLYAVSNHSG-TTMGGHYTAYCKNPSNGEWYTFNDSRVTAMSSNQVR 365
Query: 360 SAEAEHGAYILVYQ 373
S++ AY+L Y+
Sbjct: 366 SSD----AYVLFYE 375
>gi|307193102|gb|EFN76019.1| Ubiquitin carboxyl-terminal hydrolase 8 [Harpegnathos saltator]
Length = 991
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 180/381 (47%), Gaps = 63/381 (16%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNF 58
PG+ G+ N GN+CY+NS++QCLSNT + +D+ + D+ +QGQ+V+ +
Sbjct: 655 PGITGLKNLGNSCYMNSIIQCLSNTTHLAKYFTDNSYADDLNTNNDNMTQGQVVEEVAQV 714
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+K +W ++ + +A+ Y +F+ QQD+ EFL +LL ++ + K
Sbjct: 715 IKALWRGQYKSISPHDLKVAVGQYKLQFESYDQQDSHEFLTFLLDWMHNDLK-------- 766
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
S + A W+K ++ S+ SD+F GQLRS++ CS CK+ ST YE F
Sbjct: 767 ----KESKMPIEMTNAEKEWDKAMNSQKSIISDLFFGQLRSTITCSFCKQASTTYETFNS 822
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
L++ L S RC TL +C+ KF G
Sbjct: 823 LTM------------SLSHSNRC-------------------------TLNDCMEKFVTG 845
Query: 239 ETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDM 295
+ + C C+ D K ++ +L P++++ RF S + +K + + FP G ++
Sbjct: 846 QKVIGWKCPKCQTPRDATKKFDFVKLAPIVVIHLNRFAESGGWLEKRNTAVDFPLTGFNL 905
Query: 296 EYYISASGRRVES----RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
+ Y+ + S Y Y L A+SNH G T GHYTA+C+ +WY YDD V+
Sbjct: 906 KPYLVSENPTAMSNNIRNYNYTLYAMSNHYG-TMEGGHYTAFCKNATQNKWYKYDDQTVT 964
Query: 352 PVDAQTVESAEAEHGAYILVY 372
V V+S AY+L Y
Sbjct: 965 EVSPSQVKSQNT--SAYLLFY 983
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 188/386 (48%), Gaps = 42/386 (10%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSK--SQGQLVDALV 56
+ PGL G+ N GNT ++NS LQCLSNT + L + + I+ D+ +G++ +A
Sbjct: 4 IQPGLCGLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 63
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQ 115
+K MWS + + + + + +F G QQQD+QE L +LL L+E+ +V
Sbjct: 64 ELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKP 123
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
Y +N V + A WE + SV D F G +S++ C C + S ++
Sbjct: 124 YLELKDANGRPDAVVAKEA---WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDP 180
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F L+LP+P + E + + K+ +TV L +C+ F
Sbjct: 181 FCYLTLPLPLKKDRVMEGPMLQPQK----KKKTTV----------------ALRDCIELF 220
Query: 236 FNGETL--HNT--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFP 289
ETL H+ C CKK K +++ LP +L++ KRFS N + K+ + ++FP
Sbjct: 221 TTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFP 280
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
GL+M ++ R Y YDL AVSNH G + GHYTAY + + G+WY +DD+
Sbjct: 281 IRGLNMSEFVCNLSARP---YVYDLIAVSNHYGAMGV-GHYTAYAKNKLNGKWYYFDDSN 336
Query: 350 VSPVDAQTVESAEAEHGAYILVYQRR 375
VS + + AY+L YQRR
Sbjct: 337 VSLASEDQIVTK----AAYVLFYQRR 358
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGSSAHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL-NEEAKVVP-DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L NE +V P + N
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAPRPKSNP 385
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 386 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 419
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 420 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 463
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 523
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 524 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 578
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 579 VTPMSSSQVRTSD----AYLLFYE 598
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 182/381 (47%), Gaps = 64/381 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD---SKSQGQLVDALVNFMKMMW 63
G+ N GNTC++NS++QCL++T L + + S ++G L +A MK +W
Sbjct: 2 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 61
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQYNG 118
S+G ++ +A ++ + +F G QQD+QEFL YLL L+E+ + P
Sbjct: 62 RSSNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITSRPRHVTT 121
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
N S Q +A W+++ + S D FVGQL+S+++CS C S ++ FW+
Sbjct: 122 EIDDNLSDSQ----KAAEAWKRYLRFDDSKIVDCFVGQLKSTLKCSVCGHKSVTFDPFWD 177
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P ++ T+ +CL+ F
Sbjct: 178 LSLPIPKSSDSV------------------------------------TIQQCLSLFTKE 201
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC CK + K + I R P +L+L KRFS F K+ + ++FP
Sbjct: 202 EVLDGDEKPTCSNCKTRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPLTN 261
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ Y+S S + Y+L AVSNH G T GHYTA C +G W+ +DT V+
Sbjct: 262 LDLCPYMSNSHYVM-----YNLYAVSNHSGST-YSGHYTATCLHPKSGEWHECNDTKVTE 315
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
V + V S+E AY+L Y+
Sbjct: 316 VSSSRVASSE----AYVLFYE 332
>gi|164655843|ref|XP_001729050.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
gi|159102939|gb|EDP41836.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
Length = 808
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 180/398 (45%), Gaps = 68/398 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
GL G+ N G TCY+N+ +QCLS + LL+ I ++G L +A + +
Sbjct: 451 GLTGLRNFGQTCYMNATIQCLSASVLLAQYLLDGTYKRAINTQNPLGTRGALANAFASLL 510
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV----PDQ 115
+ +WS ++ + A A+ + F GN+QQD+QEFL++LL L+E+ +V P
Sbjct: 511 RALWSEQSVSVAPTAFREAIGQFAPAFRGNEQQDSQEFLMFLLDGLHEDLNLVVQRPPAL 570
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
G S+ ++ W ++ S+ D F GQLR+ + C C TS Y
Sbjct: 571 ELGEAQQAELSRLPQQLASVAEWSLYRRRNDSIVVDTFQGQLRNQLTCLTCGHTSITYNA 630
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F LSLPVP G G +LY+C++ F
Sbjct: 631 FMSLSLPVPTGRGV----------------------------------SRASLYQCMDAF 656
Query: 236 FNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFP 289
E L C CKK K + RLPPVLI+ KRF+ + K+ +P+ F
Sbjct: 657 VREEVLEKGNAWHCPKCKKPRRSTKRLSLARLPPVLIIHLKRFTFRGPASNKIETPVVFA 716
Query: 290 REGLDMEYYIS---ASGRRV------ESR---YTYDLCAVSNHIGKTALYGHYTAYCRRE 337
+ LD+ ++ G V ES+ Y YDL AV++H G T GHYTA R +
Sbjct: 717 TDALDLSNFMPPPLPPGTSVRGIPISESQRPPYLYDLFAVTHHFG-TLHSGHYTASVRTQ 775
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
G WY DD+ ++P DAQ S+ Y+L + RR
Sbjct: 776 GI--WYYCDDSRITPSDAQIQTSSP-----YVLFFSRR 806
>gi|383855982|ref|XP_003703489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Megachile
rotundata]
Length = 997
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 185/384 (48%), Gaps = 67/384 (17%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALV 56
+ PG+ G+ N GN+CY+NS++QCLSNT F + L +D+ D+ +QGQ+V +
Sbjct: 661 VHPGITGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYTDDLNTSNDNTTQGQVVQEVA 720
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV---VP 113
+K +W ++ + + + Y +F+ +QQD+ EFL +LL ++ + K VP
Sbjct: 721 QVIKALWRGQYKSISPLDLKIVVGQYKLQFESYEQQDSHEFLTFLLDWMHNDLKKSCKVP 780
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
+ + W+K ++ S+ SD+F GQLRS++ CS CK++ST Y
Sbjct: 781 SDLTVAEKA---------------WDKAMESQKSIISDLFFGQLRSTITCSFCKQSSTTY 825
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
E F L++ +P RC TL +C+
Sbjct: 826 ETFNSLTMSLPHAN------------RC-------------------------TLNDCIL 848
Query: 234 KFFNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPR 290
KF +G+ + C C+ + K ++ +L P++++ RF S + +K + + FP
Sbjct: 849 KFVSGQKVIGWKCPKCQTSREATKKFDFVKLAPIIVIHLNRFAESGGWLEKRNTGVDFPL 908
Query: 291 EGLDMEYYISASGRRVES--RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
G +++ Y+ + + Y+Y L A+SNH G T GHYTA+C+ +WY YDD
Sbjct: 909 TGFNLKPYVVLDSNTIPNIRNYSYSLYAMSNHYG-TMEGGHYTAFCKNAAQNKWYKYDDQ 967
Query: 349 VVSPVDAQTVESAEAEHGAYILVY 372
V+ V V+S AY+L Y
Sbjct: 968 TVTEVTVNHVKSQNT--SAYLLFY 989
>gi|332017535|gb|EGI58246.1| Ubiquitin carboxyl-terminal hydrolase 8 [Acromyrmex echinatior]
Length = 1005
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 183/384 (47%), Gaps = 64/384 (16%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALV 56
+ PG+ G+ N GN+CY+NS++QCLSNT + +D+ + D+ +QGQ+V+ +
Sbjct: 666 VHPGITGLKNLGNSCYMNSIIQCLSNTTNLAKYFTDNSYADDLNTNNDNMTQGQVVEEVA 725
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
+K +W ++ + +A+ Y +F+ +QQD+ EFL +LL ++ E K
Sbjct: 726 QVIKALWRGQYKSISPYDLKVAVGQYKLQFESYEQQDSHEFLTFLLDWMHNELK------ 779
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+ A W+K ++ S+ SD+F GQLRS++ CS CK+ ST YE F
Sbjct: 780 ------KNVKMPIEITNAEKEWDKAMNSQRSIISDLFFGQLRSTITCSFCKQASTTYETF 833
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
L++ L S RC TL +C+ KF
Sbjct: 834 NSLTM------------SLSQSNRC-------------------------TLNDCMEKFV 856
Query: 237 NGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGL 293
G+ + C C+ D K ++ +L P++++ RF S + +K + + FP G
Sbjct: 857 TGQKVSGWKCPKCQTPRDATKKFDFVKLAPIVVIHLNRFAESGGWLEKRNTAVDFPLTGF 916
Query: 294 DME-YYISASGRRVES----RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
+++ Y + + + + S Y Y L A+SNH G T GHYTA+C+ +WY YDD
Sbjct: 917 NLKPYLVLENTKAIMSNNIRNYNYTLYAISNHYG-TMDGGHYTAFCKNSTQNKWYKYDDQ 975
Query: 349 VVSPVDAQTVESAEAEHGAYILVY 372
V+ V V+S AY+L Y
Sbjct: 976 TVTEVSPNQVKSQNT--SAYLLFY 997
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 186/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ S + L++ ++
Sbjct: 259 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEEFAKLIQT 318
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ + +F G QQDAQEFL +LL L+ E V + N
Sbjct: 319 IWTSSANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 378
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ ++ G W K+ E S D+FVGQ
Sbjct: 379 ENLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 412
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C+ C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 413 ----------------LKSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 456
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQ+ P +L+L KRFS + T K+T+ + FP
Sbjct: 457 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFP 516
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 517 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 571
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V S++ AY+L Y+
Sbjct: 572 VTPMSSSQVRSSD----AYLLFYE 591
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 186/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L ++ S + L++ ++
Sbjct: 260 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSHAHTALMEEFAKLIQT 319
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ + +F G QQDAQEFL +LL L+ E V + N
Sbjct: 320 IWTSSANDVVSPSEFKTQIQRFAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 379
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ ++ G W K+ E S D+FVGQ
Sbjct: 380 ENLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 413
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C+ C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 414 ----------------LKSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 457
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQ+ P +L+L KRFS + T K+T+ + FP
Sbjct: 458 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFP 517
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 518 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 572
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V S++ AY+L Y+
Sbjct: 573 VTPMSSSQVRSSD----AYLLFYE 592
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 185/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 386 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 419
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 420 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 463
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 523
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 524 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 578
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 579 VTPMSSSQVRTSD----AYLLFYE 598
>gi|357619921|gb|EHJ72306.1| hypothetical protein KGM_02366 [Danaus plexippus]
Length = 354
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 182/382 (47%), Gaps = 71/382 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD--SKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS++QCL+NT N H + ++G + + L ++
Sbjct: 25 GLTGLKNLGNTCYMNSIIQCLNNTAILVTYFCNGQYLEHVNRSHSTRGAIAEELAAVVRA 84
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+WS + K + + + + F GN+QQD+ EFL L+ L+ + + + T
Sbjct: 85 LWSGQYRFIAAKDLRSEVGKHQRSFRGNEQQDSHEFLTILMDWLHLDLQFTIKPPHKETL 144
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
S RA W ++ ++ S+ +F GQ+R
Sbjct: 145 G-------ASERA---WHEYTKSKESLVLRLFYGQIR----------------------- 171
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECLNKFFNGE 239
S+VRC+ C+ +S Y+ F LSL +PP TL +CL + NGE
Sbjct: 172 ---------------STVRCTVCRASSPTYDSFSNLSLELPPAAARCTLADCLKLYLNGE 216
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-------SSNFTQKVTSPIKFPRE 291
T+ C CK++ D VK +I RLPPVL++ FKRF N +K + I FP E
Sbjct: 217 TIPGWNCPNCKEKRDAVKKLDISRLPPVLVIHFKRFYVDPKEYMCNAYRKKQTYIDFPLE 276
Query: 292 GLDM-EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
LDM ++ + G + Y+L AVSNH G T GHYTAYC+ G+WY +DD +V
Sbjct: 277 DLDMRQFSLHCPGNPI-----YNLYAVSNHYG-TMEGGHYTAYCKSSVYGKWYKFDDHLV 330
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + + V S+ AYIL Y
Sbjct: 331 SEMSSGEVRSS----AAYILFY 348
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 61/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 115
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 116 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 175
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S R + W K+ E S D+FVGQ
Sbjct: 176 ESLDHLPDEEKGRQM--WRKYLEREDSRIGDLFVGQ------------------------ 209
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 210 --------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 255
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 256 EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+
Sbjct: 316 DLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVT 370
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V +++ AY+L Y+
Sbjct: 371 PMSSSQVRTSD----AYLLFYE 388
>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 667
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 190/369 (51%), Gaps = 58/369 (15%)
Query: 15 CYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQLVDALVNFMKMMWSSGNLVLNT 72
C++NS+LQCLSNT + R+ L+ ++ +S++ L++ ++ +W+S + +
Sbjct: 340 CFMNSILQCLSNTQSLRDYCLHNLHRRDLNNNSRTNTALMEEFAKLIQTLWTSSSSEAVS 399
Query: 73 KA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST--YSNTSSKQV 129
+ ++ Y +F G QQDAQEFL +LL L+ E V + G+ + + ++
Sbjct: 400 PSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVSVRPRGTAEDFDHLQDEEK 459
Query: 130 GSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 189
G W K+ E S D+FVGQL+SS+ CS+C STV++ FW+LSLP+
Sbjct: 460 GK----KMWSKYVEREDSKIVDLFVGQLKSSLTCSHCGFCSTVFDPFWDLSLPI------ 509
Query: 190 LYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
K++ + E+S L +C+ F + L TC
Sbjct: 510 --------------SKKS------YGEVS---------LMDCMRLFTKEDVLDGDEKPTC 540
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQKVTSPIKFPREGLDMEYYISASGR 304
CK + K + IQ+ P +L+L KRFS + T K+++ + FP + LD+ + S +
Sbjct: 541 YRCKARRRCTKKFRIQKFPKILVLHLKRFSEARRTSKLSTFVNFPLKDLDLREFASGNS- 599
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
+ Y+L AVSNH G T + GHYTAYCR +G WY ++D+ V+P+ + V S++
Sbjct: 600 ---TNAMYNLYAVSNHSG-TTMGGHYTAYCRNPNSGEWYTFNDSRVTPMSSSQVRSSD-- 653
Query: 365 HGAYILVYQ 373
AY+L Y+
Sbjct: 654 --AYVLFYE 660
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 61/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 278 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 337
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 338 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 397
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S R + W K+ E S D+FVGQ
Sbjct: 398 ESLDHLPDEEKGRQM--WRKYLEREDSRIGDLFVGQ------------------------ 431
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 432 --------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 477
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 478 EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 537
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+
Sbjct: 538 DLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVT 592
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V +++ AY+L Y+
Sbjct: 593 PMSSSQVRTSD----AYLLFYE 610
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 184/384 (47%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSNP 385
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 386 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 419
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 420 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 463
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 523
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 524 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 578
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 579 VTPMSSSQVRTSD----AYLLFYE 598
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 61/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 278 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 337
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 338 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 397
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S R + W K+ E S D+FVGQ
Sbjct: 398 ESLDHLPDEEKGRQM--WRKYLEREDSRIGDLFVGQ------------------------ 431
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 432 --------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 477
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 478 EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 537
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+
Sbjct: 538 DLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVT 592
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V +++ AY+L Y+
Sbjct: 593 PMSSSQVRTSD----AYLLFYE 610
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 186/387 (48%), Gaps = 71/387 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-----LVDALVNF 58
GL G+ N GNTC++NS+LQCLSNT R+ L ++ S G L++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQR---LYMRDLSHGSSVHTALMEEFAKL 322
Query: 59 MKMMW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQ 115
++ +W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 323 IQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPK 382
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
N + + G W K+ E S D+FVGQ
Sbjct: 383 SNPENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ------------------- 419
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECL 232
L+SS+ C++C STV++ FW+LSLP+ G TL +C+
Sbjct: 420 -------------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCM 460
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPI 286
F + L TC C+ + +K + IQR P +L+L KRFS + T K+T+ +
Sbjct: 461 RLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFV 520
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
FP LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++
Sbjct: 521 NFPLRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFN 575
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQ 373
D+ V+P+ + V +++ AY+L Y+
Sbjct: 576 DSSVTPMSSSQVRTSD----AYLLFYE 598
>gi|410912832|ref|XP_003969893.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Takifugu
rubripes]
Length = 1082
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 176/379 (46%), Gaps = 59/379 (15%)
Query: 5 LNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
L G+ N GNTCY+NSVLQCL N PA F N +DI +G + + MK
Sbjct: 749 LTGLRNLGNTCYMNSVLQCLCNAPALTEYFNNNYYMDDINRSNILGHKGDVAEEFGVIMK 808
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+WS ++ + + + ++F G +QQD+QE LL+L+ L+E+ N
Sbjct: 809 ALWSGLYKCISPRDFKITIGKINEQFSGYEQQDSQELLLFLMDGLHEDLNKAD---NRKR 865
Query: 121 YSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
Y + + A W K + S+ +F GQ +S+V+C C R S +E F L
Sbjct: 866 YKEEENDHLDDQTAADVAWRKHKLLNESIIVALFQGQFKSTVQCLTCHRKSRTFETFMYL 925
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SLP L S+ +CS L +CL F E
Sbjct: 926 SLP------------LASTSKCS-------------------------LQDCLRLFSKEE 948
Query: 240 TLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGL 293
L + C++CK D K EI ++PP+L++ KRFS + QK+ + + FP + L
Sbjct: 949 KLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDSL 1008
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
D+ Y+ + ++ Y L AVSNH G GHYTAYC+ RWY +DD VS +
Sbjct: 1009 DLAQYVIGPKQSLKR---YSLYAVSNHYGGLD-GGHYTAYCKSALKQRWYKFDDHEVSDI 1064
Query: 354 DAQTVESAEAEHGAYILVY 372
+V+S+ AYIL Y
Sbjct: 1065 STSSVKSS----AAYILFY 1079
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 184/382 (48%), Gaps = 61/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 115
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 116 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 175
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S R + W K+ E S D+FVGQ
Sbjct: 176 ESLDHLPDEEKGRQM--WRKYLEREDSRIGDLFVGQ------------------------ 209
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 210 --------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 255
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 256 EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+
Sbjct: 316 DLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVT 370
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V +++ AY+ Y+
Sbjct: 371 PMSSSQVRTSD----AYLFFYE 388
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 184/384 (47%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 267 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQT 326
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 327 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPKSNP 386
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 387 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 420
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 421 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 464
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 465 TKEDVLDGEEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 524
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 525 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPATGEWHTFNDSS 579
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
V+ + + V +++ AY+L Y+
Sbjct: 580 VTAMSSSQVRTSD----AYLLFYE 599
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 184/382 (48%), Gaps = 61/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 278 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 337
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 338 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 397
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S R + W K+ E S D+FVGQ
Sbjct: 398 ESLDHLPDEEKGRQM--WRKYLEREDSRIGDLFVGQ------------------------ 431
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 432 --------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 477
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 478 EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 537
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+
Sbjct: 538 DLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVT 592
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V +++ AY+ Y+
Sbjct: 593 PMSSSQVRTSD----AYLFFYE 610
>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
8 [Papio anubis]
Length = 1109
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 177/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 765 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 824
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 825 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 881
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y +++ + F+A H W+K + S+ +F GQ +
Sbjct: 882 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 922
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 923 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 963
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 964 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1023
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1024 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 1079
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 1080 SDISISSVKSS----AAYILFY 1097
>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
Length = 1085
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 177/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL NTP F +DI +G++ +
Sbjct: 741 PALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 800
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 801 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 857
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 858 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 898
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 899 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 939
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 940 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 999
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1000 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 1055
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 1056 SDISISSVKSS----AAYILFY 1073
>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
intestinalis]
Length = 543
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 184/389 (47%), Gaps = 63/389 (16%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFM 59
S G G+ N GNTC++NS+LQCLSNT R ++E I+ +S +G L+ A V +
Sbjct: 197 SGGNVGLRNIGNTCFMNSILQCLSNTTILREYCMDETYKGEINRNSPMKGDLMRAFVEVL 256
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV--PDQYN 117
+W + + ++ ++ +F G +QQD QEFL +LL L+E+ V +
Sbjct: 257 VRLWKPNGISHSPNNFKSKIQKFSPRFMGYEQQDCQEFLRFLLEGLHEDINRVRIKSKEP 316
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
S+ S ++ +A W + T + S D+FVGQL S
Sbjct: 317 LRELSHLSPQE----KARATWSWYTTKDDSFIFDLFVGQLES------------------ 354
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-----GTLYECL 232
S+ C C+ TS Y+ FW+LSLP+ T+ +CL
Sbjct: 355 --------------------SLECQECRHTSLTYDPFWDLSLPISKKMYSNEVTTITDCL 394
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPI 286
+ F ETL C+ CK + + K I + P VL+L KRF+ S + QK+ + +
Sbjct: 395 DNFTREETLDKDEKPICERCKVRRTMTKKLSIHKFPKVLVLHLKRFNEGSRYRQKLNNLV 454
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
KFP L++ + S + R TYDL AVSNH G + GHYTAYC + W Y+
Sbjct: 455 KFPVTSLNLRNFASKT-REGNLPPTYDLYAVSNHCG-SCYGGHYTAYCYNSSSHAWLEYN 512
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D+ V+P+ V + E AY+L Y R+
Sbjct: 513 DSSVNPISDGDVCTKE----AYVLFYVRK 537
>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
[Equus caballus]
Length = 394
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 176/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 50 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 109
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 110 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 166
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 167 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 207
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 208 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 248
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 249 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 308
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 309 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 364
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 365 SDIAVSSVKSS----AAYILFY 382
>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
aries]
Length = 1086
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 177/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL NTP F +DI +G++ +
Sbjct: 742 PALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 801
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 802 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 858
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 859 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 899
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 900 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 940
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 941 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1000
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1001 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 1056
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 1057 SDISISSVKSS----AAYILFY 1074
>gi|344240807|gb|EGV96910.1| Ubiquitin carboxyl-terminal hydrolase 2 [Cricetulus griseus]
Length = 379
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 180/368 (48%), Gaps = 55/368 (14%)
Query: 15 CYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKMMW-SSGNLVLN 71
C++NS+LQCLSNT R+ L + S + L++ ++ +W SS N V++
Sbjct: 50 CFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSNAHTALMEEFAKLIQTIWTSSPNDVVS 109
Query: 72 TKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGS 131
++ Y +F G QQDAQEFL +LL L+ E V + S +
Sbjct: 110 PSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKPSPENLDHLPDDEK 169
Query: 132 FRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 191
R + W K+ E S D+FVGQL+SS+ C++C STV++ FW+LSLP+ G
Sbjct: 170 GRQM--WRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRG---- 223
Query: 192 ECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQY 247
+ E+ TL +C+ F + L TC
Sbjct: 224 ----------------------YPEV---------TLMDCMRLFTKEDVLDGDEKPTCYR 252
Query: 248 CKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRR 305
C+ + +K + +QR P +L+L KRFS + T K+T+ + FP LD+ + S +
Sbjct: 253 CRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNH 312
Query: 306 VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEH 365
Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P+ + V +++
Sbjct: 313 A----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSD--- 364
Query: 366 GAYILVYQ 373
AY+L Y+
Sbjct: 365 -AYLLFYE 371
>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
aries]
Length = 1009
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 177/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL NTP F +DI +G++ +
Sbjct: 665 PALTGLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 724
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 725 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 781
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 782 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 822
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 823 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 863
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 864 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 923
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 924 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 979
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 980 SDISISSVKSS----AAYILFY 997
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 186/381 (48%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQT 115
Query: 62 MWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W+S N V++ ++ Y +F G QQDAQEFL +LL L+ V + N
Sbjct: 116 IWTSSLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRVTVRPKSNP 175
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 176 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 231
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 232 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 256
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 257 DVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 316
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+
Sbjct: 317 LDLREFASETTNHA----VYNLYAVSNHSG-TTVGGHYTAYCRSPVTGEWHTFNDSSVTS 371
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 372 MFSSQVRTSD----AYLLFYE 388
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 186/381 (48%), Gaps = 59/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 262 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQT 321
Query: 62 MWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W+S N V++ ++ Y +F G QQDAQEFL +LL L+ V + N
Sbjct: 322 IWTSSLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNAVNRVTVRPKSNP 381
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 382 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 437
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 438 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 462
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 DVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 522
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+
Sbjct: 523 LDLREFASETTNHA----VYNLYAVSNHSG-TTVGGHYTAYCRSPVTGEWHTFNDSSVTS 577
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + V +++ AY+L Y+
Sbjct: 578 MFSSQVRTSD----AYLLFYE 594
>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
Length = 1117
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 176/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F EDI +G++ +
Sbjct: 773 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSNLLGHKGEVAEEFGII 832
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 833 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 889
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A Y W+K + S+ +F GQ +
Sbjct: 890 KRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQFK------------------- 930
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 931 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 971
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 972 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1031
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1032 ENLDLAQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 1087
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 1088 SDISISSVKSS----AAYILFY 1105
>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
gorilla]
Length = 355
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 172/359 (47%), Gaps = 61/359 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + LV+ ++
Sbjct: 22 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 81
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 82 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 141
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 142 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 175
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 176 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 219
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 220 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 279
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 280 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDS 333
>gi|157131752|ref|XP_001662320.1| ubiquitin specific protease [Aedes aegypti]
gi|108871397|gb|EAT35622.1| AAEL012219-PA [Aedes aegypti]
Length = 648
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 186/384 (48%), Gaps = 67/384 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNT L E ++ ++K+QG++ + + +K
Sbjct: 306 GLTGLKNLGNTCYMNSILQCLSNTTFLNEYFLEEQFKQNLNRNNKTQGRIAEEVAAVIKA 365
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W+ + +K + + Y ++F G +QQD+ E L L+ L+ + + VP + + S
Sbjct: 366 LWTGQYKCIASKNLRFVVGQYERQFGGIEQQDSHELLTILMDWLHSDLQTVPIEIDTSLE 425
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ +S++ + E F+ E+ +V QL
Sbjct: 426 NLPASERA-------WVEYFKGKES------YVAQLSYG--------------------- 451
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECLNKFFNGE 239
Q++S V+C C + S YE F LSL +P L +CL+ +FNGE
Sbjct: 452 ------------QIKSMVKCVRCGKESATYESFSSLSLDLPSDANRCDLSDCLDMYFNGE 499
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS------SNFTQKVTSPIKFPREG 292
+ C CK +K +I RLP +L++ FKRF S +K + +KFP
Sbjct: 500 RIMGWNCPQCKSSQVAIKKLDISRLPSILVIHFKRFYADPEALSTVYKKKQNYVKFPLTD 559
Query: 293 LDMEYYISASGR----RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
LDM +++ S + +++SR Y L VSNH G + GHYTA+CR + +WY YDD
Sbjct: 560 LDMSPHVAPSEKTRNHKLKSR-RYHLYGVSNHYG-SMESGHYTAFCRNKLHNKWYKYDDH 617
Query: 349 VVSPVDAQTVESAEAEHGAYILVY 372
VS +D V S+ AYIL Y
Sbjct: 618 TVSSLDKSDVCSS----AAYILFY 637
>gi|384498157|gb|EIE88648.1| hypothetical protein RO3G_13359 [Rhizopus delemar RA 99-880]
Length = 523
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 179/386 (46%), Gaps = 68/386 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNFM 59
G G+ N GNTCY+NS++QCLS T F ++ H + ++ G L + + +
Sbjct: 168 GTTGLKNLGNTCYMNSIIQCLSGTLPFARYFISGVFRQHVNRTNKLGTGGILTEKFADLL 227
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+ +W+ ++ + A+ + +F G Q D+QEFL +LL ++E+ + ++G
Sbjct: 228 RAIWNENYNFVSPMSFREAIIRFAPRFSGTDQHDSQEFLTFLLDGIHEDVNLASHNHSGH 287
Query: 120 TYSNTSSKQVGSFRAL-------HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
+ T +++ F L WE++ + S+ +F GQ RS + CS+CK TST
Sbjct: 288 LPTMTKQEEL-EFEKLPDWQASAMAWERYLSRNTSIVVSLFQGQYRSRLTCSSCKHTSTT 346
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
Y F LSLP+P +S ++ SN TLY+CL
Sbjct: 347 YTPFMSLSLPIP----------AKSRLKISNV----------------------TLYQCL 374
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPI 286
+ F E L C C K+ K I RLP VL++ KRFS++ F K+ +
Sbjct: 375 DYFVKEEVLEKDDAWMCPKCGKKRKATKQLMISRLPDVLLIHLKRFSADGLFKNKLDVMV 434
Query: 287 KFPREGLDMEYYIS--------------ASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
K+P +GLD+ Y+S A R + TYDL AVSNH G + GHYTA
Sbjct: 435 KYPIKGLDLYNYVSRFIPPRPPSSSTSLAQDRTLS---TYDLYAVSNHYGSLS-GGHYTA 490
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTV 358
Y + W+ +DD+ S D V
Sbjct: 491 YVKDGHRNIWHYFDDSKFSTCDESKV 516
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 187/386 (48%), Gaps = 69/386 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++NS+LQCLSNT ++ L +D+ S + L++ +
Sbjct: 272 GLAGLRNLGNTCFMNSILQCLSNTRELKDYCLQRLYMQDL--SHTSSTHTALMEEFAKLI 329
Query: 60 KMMWSS-GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ +W+S N V++ ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 330 QTIWTSCPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKS 389
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N ++ + G W K+ E S D+FVGQ
Sbjct: 390 NPENLNHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ-------------------- 425
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLN 233
L+SS+ C++C STV++ FW+LSLP+ TL +C+
Sbjct: 426 ------------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRSYPEVTLMDCMR 467
Query: 234 KFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIK 287
F + L TC C+ + +K + IQR P +L+L KRFS + T K+T+ +
Sbjct: 468 LFTKEDVLDGDEKPTCCCCRARKRCIKKFSIQRFPTILVLHLKRFSESRIRTSKLTTFVN 527
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D
Sbjct: 528 FPLRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFND 582
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQ 373
+ V+P+ + V +++ AY+L Y+
Sbjct: 583 SSVTPMSSSQVRTSD----AYLLFYE 604
>gi|441644453|ref|XP_003253547.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Nomascus
leucogenys]
Length = 577
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 172/359 (47%), Gaps = 61/359 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + L++ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALMEEFAKLIQT 324
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
LD+ + S + Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDS 576
>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
caballus]
Length = 1117
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 176/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 773 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 832
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 833 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 889
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 890 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 930
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 931 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 971
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 972 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1031
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1032 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 1087
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 1088 SDIAVSSVKSS----AAYILFY 1105
>gi|45382531|ref|NP_990257.1| ubiquitin carboxyl-terminal hydrolase 2 [Gallus gallus]
gi|3800760|gb|AAC68863.1| ubiquitin specific protease 46 [Gallus gallus]
Length = 403
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 177/380 (46%), Gaps = 59/380 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
G G+ N GNTCY+NS+LQCLSNT R+ L + +S+ + + +++
Sbjct: 17 GSTGLRNLGNTCYMNSILQCLSNTKELRDYCLQNQYLRDFNNNSRMRTAFMSEFAKLIQL 76
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
W SS N ++ ++ Y +F G QQDAQEFL +LL L+ E +V + N
Sbjct: 77 FWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANA 136
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + + ++ W ++Q E S SD F+GQL+SS+ S C ST ++ FW+
Sbjct: 137 DTLDHFPDDE----KSRQMWRRYQEREDSPVSDFFLGQLKSSLTSSECGYCSTAFDPFWD 192
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P G G TL CL F
Sbjct: 193 LSLPIPKKGY-----------------------------------GEVTLMHCLPLFTKE 217
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
+ L TC CK ++ K + IQ+ P +L+L KRFS + K+T+ + FP +
Sbjct: 218 DLLDGDEKPTCCRCKARTRCTKKFSIQKFPKILLLHLKRFSEARIRASKLTTFVDFPLKD 277
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ + S S Y L VSNH G T + GHY +R W+ ++D+ V+P
Sbjct: 278 LDLREFASQSCNHA----VYKLYGVSNHSG-TTMGGHYHCLLKRPSPAEWHSFNDSRVTP 332
Query: 353 VDAQTVESAEAEHGAYILVY 372
+ + V S++ AY+L Y
Sbjct: 333 MSSTHVRSSD----AYLLFY 348
>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
Length = 1011
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 176/382 (46%), Gaps = 61/382 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 667 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 726
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 727 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 783
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 784 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 824
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 825 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 865
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 866 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 925
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 926 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEV 981
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
S + +V+S+ AYIL Y
Sbjct: 982 SDIAVSSVKSS----AAYILFY 999
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 177/384 (46%), Gaps = 61/384 (15%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALV 56
+ L G+ N GNTCY+NS+LQCL NTPA F N EDI H +G++ +
Sbjct: 745 LGASLTGLRNLGNTCYMNSILQCLCNTPALAEYFNNNCYLEDINRHNILGHKGEVAEEFG 804
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
MK +W+ ++ + + + ++F G QQD+QE LL+L+ L+E+ ++
Sbjct: 805 VIMKALWAGLYKCISPRDFKITIGKINEQFAGYDQQDSQELLLFLMDGLHEDLNKADNRK 864
Query: 117 NGSTYSNTS-SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
N Q G+ A W K + S+ +F GQ +
Sbjct: 865 RYKEEENDHLDDQTGADLA---WSKHKLLNESIIVALFQGQFK----------------- 904
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNK 234
S+V+C C R S +E F LSLP+ +L +CL
Sbjct: 905 ---------------------STVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRL 943
Query: 235 FFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKF 288
F E L + C++CK D K EI ++PP+L++ KRFS + QK+ + + F
Sbjct: 944 FSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDF 1003
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P + LD+ Y+ + ++ Y+L VSNH G GHYTAYC+ RWY +DD
Sbjct: 1004 PLDNLDLAQYVIGPKQSLKR---YNLYGVSNHYGGLD-GGHYTAYCKNAAKQRWYKFDDH 1059
Query: 349 VVSPVDAQTVESAEAEHGAYILVY 372
VS + +V+S+ AYIL Y
Sbjct: 1060 EVSDISTSSVKSS----AAYILFY 1079
>gi|405962262|gb|EKC27956.1| Ubiquitin carboxyl-terminal hydrolase 2 [Crassostrea gigas]
Length = 368
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 173/387 (44%), Gaps = 97/387 (25%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD---SKSQGQLVDALVN 57
M+ G G+ N GNTC++NSVLQCLSNT L +D + S +GQLV A N
Sbjct: 59 MNGGKVGLRNLGNTCFMNSVLQCLSNTKPLLEYFLRDDFTFDKNTTTSSMKGQLVTAYAN 118
Query: 58 FMKMMWSS-GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---- 112
MK MW+ + ++ + ++ + +F G QQDAQEFL YLL L+E+ V
Sbjct: 119 LMKSMWNERSDSQVSPNSFKTQIQRFAPRFMGYAQQDAQEFLRYLLEGLHEDVNKVTSKP 178
Query: 113 -PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
P +SN K A YW + T + S +IFVGQL+S +R +C S
Sbjct: 179 KPVTIQDEDFSNDQDK------AKEYWRVYLTYDNSHIVEIFVGQLKSELRF-DCDHRSV 231
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYEC 231
++ FW+LS+P+P ++R+ V ++ +C
Sbjct: 232 TFDPFWDLSVPIP---------KMRNDV---------------------------SIIQC 255
Query: 232 LNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIK 287
L F E L TC C+K+ K++ IQR P +L+L
Sbjct: 256 LTAFMKAEVLDGDERPTCSKCRKRMRCTKMFSIQRFPTILVL------------------ 297
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
G+RV Y+L VSNH G GHYTA C+ +G W +++D
Sbjct: 298 --------------RGKRV----LYNLYGVSNHSGGVH-SGHYTANCKHPYSGEWNVFND 338
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQR 374
T VSP A S+E AY+L Y+R
Sbjct: 339 TRVSPTSASRAVSSE----AYLLFYER 361
>gi|358341643|dbj|GAA49264.1| ubiquitin carboxyl-terminal hydrolase 2 [Clonorchis sinensis]
Length = 655
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 180/381 (47%), Gaps = 56/381 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS++QCLSNT ++E ++ S +G L A + M
Sbjct: 317 GLVGLNNLGNTCFMNSIIQCLSNTHPLLEYCISERYVNDLNKSSTMRGNLFTAYASLMNE 376
Query: 62 MWSSGNLVLNTKAILLA--LRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+W +T + ++ + +F G QQD+QEFL Y+L L+ E V + +
Sbjct: 377 LWDPEMFESSTSPMQFKTQIQRFAPRFVGYSQQDSQEFLRYVLEGLHNEVNRVTKRPHPV 436
Query: 120 TYSNTSSKQVGSF-RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + ++ +A YW+++ + + S D+FVGQL S++
Sbjct: 437 TPDYAAEDKLADRDKADLYWKRYLSMDNSAIVDLFVGQLMSTLE---------------- 480
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT-LYECLNKFFN 237
C+ C ST ++ FW+LSLP+P + +CL F +
Sbjct: 481 ----------------------CAECGFKSTTFDPFWDLSLPIPKKANVNIMDCLRLFTS 518
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQKVTSPIKFPREG 292
E L C CK + K + +Q+ P +L+L KRFS F K++ + +P
Sbjct: 519 KEDLDGHERPMCGRCKVRRRCTKHFSLQKFPRILVLHLKRFSGERFRSKMSVLVDYPLND 578
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + S S ++ +RY +L AVSNH G + GHYTA CR WY Y+D+ V P
Sbjct: 579 LNLSEFASPSCQQRYARY--NLYAVSNHSG-SVYAGHYTAICRHHYRNSWYDYNDSRVRP 635
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
Q+V SAE Y+L Y+
Sbjct: 636 TSTQSVVSAE----GYVLFYE 652
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 186/384 (48%), Gaps = 65/384 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S++ L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E + + N
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVIARPKSNT 385
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + G W K+ E S D+FVGQ
Sbjct: 386 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 419
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 420 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEVTLMDCMRLF 463
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFP 523
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 524 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 578
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
VSP+ + V +++ AY+L Y+
Sbjct: 579 VSPMSSSQVRTSD----AYLLFYE 598
>gi|340717430|ref|XP_003397185.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Bombus
terrestris]
Length = 996
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 189/386 (48%), Gaps = 71/386 (18%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
PG+ G+ N GN+CY+NS++QCLSNT F + L +D+ + D+ +QGQ+V+ +
Sbjct: 658 PGITGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNTNNDNNTQGQVVEEVAQV 717
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV---VPDQ 115
+K +W ++ + +A+ Y +F+ +QQD+ EFL +LL ++ + K VP
Sbjct: 718 IKALWRGQYKSISPHDLKIAVGQYKLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVP-- 775
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ A W+K ++ S+ SD+F GQLRS++ CS CK++ST YEI
Sbjct: 776 -------------LEMTVAEKAWDKAMDSQKSIISDLFFGQLRSTITCSFCKQSSTTYEI 822
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F L++ +P RC TL +C+ KF
Sbjct: 823 FNSLTMSLPHAN------------RC-------------------------TLNDCILKF 845
Query: 236 FNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREG 292
+G+ + C C+ + K ++ +L P++++ RF S + +K + + FP
Sbjct: 846 VSGQKVIGWKCPKCQTPREATKKFDFVKLAPIIVIHLNRFAESGGWLEKRNTAVDFPLTD 905
Query: 293 LDMEYYI-----SASGRRVES-RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++ Y+ SA+ + S Y+Y L A+SNH G T GHYTA+C+ +WY YD
Sbjct: 906 FNLKPYLVADSSSATISNIRSYNYSYSLYAMSNHYG-TMEGGHYTAFCKNATQNKWYKYD 964
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVY 372
D V+ V V S AY+L Y
Sbjct: 965 DQTVTEVTVNQVRSQNT--NAYLLFY 988
>gi|347968815|ref|XP_312004.5| AGAP002900-PA [Anopheles gambiae str. PEST]
gi|333467828|gb|EAA08027.5| AGAP002900-PA [Anopheles gambiae str. PEST]
Length = 901
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 182/383 (47%), Gaps = 66/383 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH--PDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNT + +H ++K+QG++ + + +K
Sbjct: 559 GLTGLKNLGNTCYMNSILQCLSNTHFLNEFFHDPSFKMHLNRNNKTQGKIGEEVAAVIKA 618
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W+ + +K + + Y ++F G +QQD+ EFL L+ L+ + +
Sbjct: 619 LWTGQYKCIASKNLRYVVGQYERQFGGIEQQDSHEFLTILMDWLHSDLQ----------- 667
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
T QV + L EK + + F G + S + E+F+
Sbjct: 668 --TKQMQVSALDQLPPSEK-------AWIEHFKG------------KDSYISELFY---- 702
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY--ECLNKFFNGE 239
Q++S+V+C+ C + S YE F LSL +P Y CL+ +FNGE
Sbjct: 703 -----------GQIKSTVKCTRCHKESATYESFSNLSLELPQDSNICYLENCLDMYFNGE 751
Query: 240 TLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN------FTQKVTSPIKFPREG 292
+ C CK D +K +I RLP +L++ FKRF ++ +K + +KFP
Sbjct: 752 EVRGWHCPKCKSNQDAIKKLDISRLPSILVVHFKRFYADPDTMATVYRKKQTLVKFPLSE 811
Query: 293 LDMEYYISASGRRVESRYT---YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
L+M Y++ + R T Y L VSNH G GHYTA+C +W+ +DD
Sbjct: 812 LNMTRYLARTEVNRNKRLTTFRYHLYGVSNHYGSME-SGHYTAFCLNNIHQKWFKFDDYN 870
Query: 350 VSPVDAQTVESAEAEHGAYILVY 372
VS +DA V+++ AYIL Y
Sbjct: 871 VSSIDASDVQAS----AAYILFY 889
>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
carolinensis]
Length = 1066
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 174/384 (45%), Gaps = 61/384 (15%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALV 56
M P L G+ N GNTCY+NS+LQCL N P F DI +G++ +
Sbjct: 720 MGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQVDINRSNFLGHKGEVAEEFG 779
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+
Sbjct: 780 IIMKALWAGQYRYISPKDFKMTIGKINDQFAGYSQQDSQELLLFLMDDLHEDLNKAD--- 836
Query: 117 NGSTYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
N Y ++ + +A W K + S+ +F GQ +
Sbjct: 837 NRKRYKEENNDDLDDPKAADLAWHKHKQLNESIIVALFQGQFK----------------- 879
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNK 234
S+V+C C + S +E F LSLP+ TL EC
Sbjct: 880 ---------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECFRL 918
Query: 235 FFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKF 288
F E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + F
Sbjct: 919 FSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDF 978
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P E LD+ Y+ G + S+ Y+L AVSNH G GHYTAYC+ RWY +DD
Sbjct: 979 PLESLDVSQYVI--GPKSNSK-RYNLFAVSNHYGGLD-GGHYTAYCKNATKQRWYKFDDH 1034
Query: 349 VVSPVDAQTVESAEAEHGAYILVY 372
VS + +V+S+ AYIL Y
Sbjct: 1035 EVSEISTSSVKSS----AAYILFY 1054
>gi|348521632|ref|XP_003448330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Oreochromis niloticus]
Length = 404
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 178/383 (46%), Gaps = 54/383 (14%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
+ G G+ N GNTC++N+V+QCLS+T R+ L + SK + +L++A +
Sbjct: 58 LGSGRTGLRNIGNTCFLNAVVQCLSHTCGLRDYCLLKSYKHEKFSKEEAKLMEAFSKVLS 117
Query: 61 MMW--SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP-DQYN 117
+W + G V+N + F G QQDAQEFL +LL L+ E P +
Sbjct: 118 GLWGVNEGETVVNPRQFYNVFTEAVPYFSGYSQQDAQEFLRFLLDKLHTEINRRPYIRRT 177
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
G ++ S A W+K + S+ D+F GQLRSS+ CS C S +++F
Sbjct: 178 GKEPEQKFARFRISEEAAVMWKKHLERDDSIIVDLFSGQLRSSLHCSVCSHYSNTFDVFC 237
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LSLP+P KR+S+ G TL ECL+ F
Sbjct: 238 DLSLPIP--------------------KRSSS--------------GEVTLRECLDLFSQ 263
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPRE 291
E L C+ C ++++ K IQR P V+++ RF+++ K T + FP
Sbjct: 264 EEKLDKENSPMCERCNRRTECTKRLSIQRFPQVIVIHLNRFTTSRWSISKSTVYVSFPLT 323
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ Y V YDL A+ NH G T GHYTA C E W Y+D+ V+
Sbjct: 324 NLDLGPYGPVDCGSV----LYDLYAICNHAG-TVNMGHYTACCLDENG--WCFYNDSSVT 376
Query: 352 PVDAQTVESAEAEHGAYILVYQR 374
P+ +++ + AY+L YQR
Sbjct: 377 PLTENQLQTNQ----AYVLFYQR 395
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 183/385 (47%), Gaps = 76/385 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L+ +H S + L +A
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLHRLYVRDLHHGSNAHTALREA------- 318
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNGS 119
S N V++ ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 319 ---SPNEVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPE 375
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ + G W K+ E S D+FVGQ
Sbjct: 376 NLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ----------------------- 408
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFF 236
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 409 ---------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFT 453
Query: 237 NGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPR 290
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 454 KEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPL 513
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAY--CRREGTGRWYLYDDT 348
LD+ + S + Y+L AVSNH G T + GHYTAY CR GTG W+ ++D+
Sbjct: 514 RDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYSNCRSPGTGEWHTFNDS 568
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 569 SVTPMSSSQVRTSD----AYLLFYE 589
>gi|350407452|ref|XP_003488090.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Bombus
impatiens]
Length = 994
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 188/386 (48%), Gaps = 71/386 (18%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
PG+ G+ N GN+CY+NS++QCLSNT F + L +D+ + D+ +QGQ+V+ +
Sbjct: 656 PGITGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNTNNDNNTQGQVVEEVAQV 715
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV---VPDQ 115
+K +W ++ + +A+ Y +F+ +QQD+ EFL +LL ++ + K VP
Sbjct: 716 IKALWRGQYKSISPHDLKIAVGQYKLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVP-- 773
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ A W+K ++ S+ SD+F GQLRS++ CS CK++ST YE+
Sbjct: 774 -------------LEMTVAEKAWDKAMDSQKSIISDLFFGQLRSTITCSFCKQSSTTYEM 820
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F L++ +P RC TL +C+ KF
Sbjct: 821 FNSLTMSLPHAN------------RC-------------------------TLNDCILKF 843
Query: 236 FNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREG 292
+G+ + C C+ + K ++ +L P++++ RF S + +K + + FP
Sbjct: 844 VSGQKVVGWKCPKCQTPREATKKFDFVKLAPIIVIHLNRFAESGGWLEKRNTAVDFPLTD 903
Query: 293 LDMEYYI-----SASGRRVES-RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++ Y+ SA+ + S Y Y L A+SNH G T GHYTA+C+ +WY YD
Sbjct: 904 FNLKPYLVADSNSAAISNIRSYNYNYSLYAMSNHYG-TMEGGHYTAFCKNATQNKWYKYD 962
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVY 372
D V+ V V S AY+L Y
Sbjct: 963 DQTVTEVTVNQVRSQNT--NAYLLFY 986
>gi|432866297|ref|XP_004070782.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Oryzias
latipes]
Length = 404
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 179/386 (46%), Gaps = 60/386 (15%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
+ G G+ N GNTC++N+V+QCLS+T A RN L + SK +L++A +
Sbjct: 58 LGSGRVGLRNIGNTCFLNAVVQCLSHTRALRNYSLLKSYKHEKFSKEDAKLMEAFSKVLS 117
Query: 61 MMW--SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W + G+ V++ + + F G QQDAQEFL +LL L+ E P N
Sbjct: 118 GLWDVNDGDTVVHPRKFYSIFKDAVPYFSGYSQQDAQEFLRFLLDKLHTEINRRP---NV 174
Query: 119 STYSNTSSKQVGSFR----ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
++ FR A W+K + S+ ++F GQLRSS+ CS C S ++
Sbjct: 175 RKTGKEPEQKYARFRIAEEAAAMWKKHLERDDSIIVELFSGQLRSSLHCSVCSHYSNTFD 234
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNK 234
+F +LSLP+P RSS R E+ TL+ECL+
Sbjct: 235 VFCDLSLPIPK----------RSSGR-----------EV-------------TLWECLDL 260
Query: 235 FFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKF 288
F E L C+ C + ++ K IQR P VL++ RF+++ K T + F
Sbjct: 261 FSQEEKLDKENSPMCERCNRHTECTKRLSIQRFPQVLVIHLNRFTTSRWSISKSTVHVSF 320
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P LD+ Y A V YDL A+ NH G T GHYTA C E W Y+D
Sbjct: 321 PITNLDLGPYGPADCGPV----LYDLYAICNHAG-TVNMGHYTACCLDENG--WCFYNDC 373
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQR 374
V+ + +++ + AY+L YQR
Sbjct: 374 SVTALSENQLQTNQ----AYVLFYQR 395
>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
gallopavo]
Length = 1124
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 166/363 (45%), Gaps = 57/363 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F L ++DI +G++ +
Sbjct: 780 PALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYHDDINRSNFLGHKGEVAEEFGVI 839
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 840 MKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 896
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + RA W+K + S+ +F GQ +
Sbjct: 897 KRYKEENNDHLDDLRAAELAWQKHKQLNESIIVALFQGQFK------------------- 937
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL ECL F
Sbjct: 938 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFS 978
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 979 KEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1038
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1039 ETLDLSQYVIGPKNNLKR---YNLFSVSNHYGGLD-GGHYTAYCKNASKQRWFKFDDHEV 1094
Query: 351 SPV 353
S +
Sbjct: 1095 SEI 1097
>gi|328708865|ref|XP_003243820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Acyrthosiphon pisum]
Length = 792
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 175/382 (45%), Gaps = 71/382 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD-----SKSQGQLVDALVNF 58
GL G+ N GNTCY+NS+LQCLS+T +N I+ + S+++G + N
Sbjct: 471 GLRGLQNLGNTCYMNSILQCLSSTEDLVKYFIN----IYSNFTNYKSRTKGLVAKEFSNV 526
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+K +WS ++ + Y F QQD+ EFL LL L+++ +Q
Sbjct: 527 IKNLWSQSGRGFQSQQFKDTIGEYKDMFKHYDQQDSHEFLTILLDWLHDDL----NQPED 582
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ +SK+ G W + S+ +F GQ +S+
Sbjct: 583 NRVILGASKETGE----EDWGNWTKANNSIIQQLFYGQQKST------------------ 620
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECLNKFF 236
V C C S +E F LSLP+P G TL +CL +
Sbjct: 621 --------------------VSCDTCFEKSVTFEPFLSLSLPLPSEGNKCTLSDCLQLYL 660
Query: 237 NGETL---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGL 293
NGE++ H C CK+ D K +I RLPP LI+ KRFSSN +K S ++FP+ L
Sbjct: 661 NGESICGWH--CPKCKRNRDATKKLDIMRLPPYLIIHLKRFSSNGYKK-NSNVEFPKMNL 717
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
DM +I+ R + Y L VSNH G + GHYTA C + +WY +DD V +
Sbjct: 718 DMSNFINGLEHR---NWKYYLYGVSNHSG-SLDGGHYTASCFKNSINKWYKFDDVRVYEI 773
Query: 354 DAQTVESAEAEHGAYILVYQRR 375
D+ T+ S E AYIL Y+R+
Sbjct: 774 DSSTICSPE----AYILFYRRK 791
>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
Length = 395
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 61/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 55 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSSTHTALMEEFAKLIQA 114
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 115 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTARPKPSP 174
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ R + W ++ E S D+FVGQ
Sbjct: 175 ENLDHLPDDEKGRQM--WRRYLEREDSRIGDLFVGQ------------------------ 208
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 209 --------------LKSSLTCTDCGFCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 254
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 255 EDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 314
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ VS
Sbjct: 315 DLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVS 369
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V +++ AY+L Y+
Sbjct: 370 PMSSSQVRTSD----AYLLFYE 387
>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Sus scrofa]
Length = 396
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 184/382 (48%), Gaps = 61/382 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 56 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQT 115
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V + S
Sbjct: 116 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPKSSP 175
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
R + W K+ E S D+FVGQ
Sbjct: 176 EGLDHLPDDEKGRQM--WRKYLEREDSRIGDLFVGQ------------------------ 209
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F
Sbjct: 210 --------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 255
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
+ L TC C+ + +K + +QR P +L+L KRFS + T K+T+ + FP
Sbjct: 256 EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ VS
Sbjct: 316 DLDLREFASENINHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVS 370
Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
P+ + V +++ AY+L Y+
Sbjct: 371 PMSSSQVRTSD----AYLLFYE 388
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 174/377 (46%), Gaps = 67/377 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT L + I+ S G L + + MK
Sbjct: 160 GLVGLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKE 219
Query: 62 MWSS--GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV------- 112
+W N + ++ + +F G QQD+QEFL Y+L L+ E V
Sbjct: 220 IWDPDMANSSTSPSRFKSQIQRFAPRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPNPI 279
Query: 113 -PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
PD Y Y+ +A YW ++ + + S D+FVGQL S++ C C ST
Sbjct: 280 KPD-YEAEDYNE---------KANLYWRRYLSMDNSEIVDLFVGQLMSTLECGECSFKST 329
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYEC 231
++ FW+LSLP+P + S V ++ +C
Sbjct: 330 TFDPFWDLSLPIP---------------------KKSNV----------------SILDC 352
Query: 232 LNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN-FTQKVTSPI 286
LN F + E L C CK + K + IQ+ P +L+L KRFS F K++ +
Sbjct: 353 LNLFTSKEELDGNERPICSRCKTRRRCAKSFSIQKFPQILVLHLKRFSGERFRSKMSVMV 412
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+P LD+ + ++S + ++Y L AVSNH G + GHYTA C TG W+ ++
Sbjct: 413 DYPLRNLDLIGFATSSCTQKSAQYK--LYAVSNHSG-SVYTGHYTASCLNPYTGDWHSFN 469
Query: 347 DTVVSPVDAQTVESAEA 363
D+ V + +V SAE
Sbjct: 470 DSHVHAISENSVVSAEG 486
>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
latipes]
Length = 1074
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 172/384 (44%), Gaps = 61/384 (15%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALV 56
M L G+ N GNTCY+NS+LQCL NTPA F + EDI +G+ +
Sbjct: 737 MGASLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNSNYYLEDINRSNILGHKGEFAEEFG 796
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
MK +W+ ++ + + + +F G QQD+QE LL+L+ L+E+
Sbjct: 797 VIMKALWAGLYKCISPRDFKITIGKINDQFAGYDQQDSQELLLFLMDGLHEDLNKAD--- 853
Query: 117 NGSTYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
N Y + + A W K + S+ +F GQ +
Sbjct: 854 NKKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVALFQGQFK----------------- 896
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNK 234
S+V+CS C R S +E F LSLP+ +L +CL
Sbjct: 897 ---------------------STVQCSTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRL 935
Query: 235 FFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKF 288
F E L + C++CK D K EI ++PP+L++ KRFS + QK+ + + F
Sbjct: 936 FSKEEKLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTTVDF 995
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P + LD+ Y+ + ++ Y Y VSNH G GHYTAYC+ RWY +DD
Sbjct: 996 PLDNLDLTQYVIGPKQTLKRYYLY---GVSNHYGGLD-GGHYTAYCKNATKQRWYKFDDH 1051
Query: 349 VVSPVDAQTVESAEAEHGAYILVY 372
VS + +V+S+ AYIL Y
Sbjct: 1052 EVSEISTSSVKSS----AAYILFY 1071
>gi|449268039|gb|EMC78912.1| Ubiquitin carboxyl-terminal hydrolase 8 [Columba livia]
Length = 1110
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 164/363 (45%), Gaps = 57/363 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F L +DI +G++ +
Sbjct: 766 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRSNFLGHKGEVAEEFGVI 825
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 826 MKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 882
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + RA W K + S+ +F GQ +
Sbjct: 883 KRYKEENNDHLDDLRAAELAWHKHKQLNESIIVALFQGQFK------------------- 923
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL ECL F
Sbjct: 924 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFS 964
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 965 KEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1024
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1025 ETLDLSQYVIGPKNNLKR---YNLFSVSNHYGGLD-GGHYTAYCKNASKQRWFKFDDHEV 1080
Query: 351 SPV 353
S +
Sbjct: 1081 SEI 1083
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 177/381 (46%), Gaps = 64/381 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD---SKSQGQLVDALVNFMKMMW 63
G+ N GNTC++NS++QCL++T L + + S ++G L +A MK +W
Sbjct: 35 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 94
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQYNG 118
S+G ++ +A ++ + +F G QQD+QEFL YLL L+E+ + P
Sbjct: 95 RSSNGEYAISPQAFRSQIQKFAPRFMGYSQQDSQEFLHYLLQGLHEDINRITSRPRHVTT 154
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
N S Q +A W+++ + S D FV +++CS C S ++ FW+
Sbjct: 155 EIDDNLSDSQ----KAAEAWKRYLRFDDSKIVDCFVXXXXXTLKCSVCGHKSVTFDPFWD 210
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P ++ T+ +CL+ F
Sbjct: 211 LSLPIPKSSDSV------------------------------------TIQQCLSLFTKE 234
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L TC C+ + K + I R P +L+L KRFS F K+ + ++FP
Sbjct: 235 EVLDGDEKPTCSNCETRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPLTN 294
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LD+ Y+S S + Y+L AVSNH G T GHYTA C +G W+ +DT V+
Sbjct: 295 LDLCPYMSNSHYVM-----YNLYAVSNHSGST-YSGHYTATCLHPKSGEWHECNDTKVTE 348
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
V + V S+E AY+L Y+
Sbjct: 349 VSSSRVASSE----AYVLFYE 365
>gi|363737748|ref|XP_413830.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Gallus
gallus]
Length = 1125
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 165/363 (45%), Gaps = 57/363 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F L +DI +G++ +
Sbjct: 781 PALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSNFLGHKGEVAEEFGVI 840
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 841 MKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 897
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + +A W+K + S+ +F GQ +
Sbjct: 898 KRYKEENNDHLDDLKAAELAWQKHKQLNESIIVALFQGQFK------------------- 938
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL ECL F
Sbjct: 939 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFS 979
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 980 KEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1039
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1040 ETLDLSQYVIGPKNNLKR---YNLFSVSNHYGGLD-GGHYTAYCKNASKQRWFKFDDHEV 1095
Query: 351 SPV 353
S +
Sbjct: 1096 SEI 1098
>gi|221043762|dbj|BAH13558.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 177/371 (47%), Gaps = 65/371 (17%)
Query: 17 INSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKMMW-SSGNLVLNTK 73
+NS+LQCLSNT R+ L +H S + LV+ ++ +W SS N V++
Sbjct: 1 MNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDVVSPS 60
Query: 74 AILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNGSTYSNTSSKQVGS 131
++ Y +F G QQDAQEFL +LL L+ E V + N + + G
Sbjct: 61 EFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGR 120
Query: 132 FRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 191
W K+ E S D+FVGQ
Sbjct: 121 ----QMWRKYLEREDSRIGDLFVGQ----------------------------------- 141
Query: 192 ECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFNGETLHN----T 244
L+SS+ C++C STV++ FW+LSLP+ G TL +C+ F + L T
Sbjct: 142 ---LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPT 198
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPREGLDMEYYISAS 302
C C+ + +K + IQR P +L+L KRFS + T K+T+ + FP LD+ + S +
Sbjct: 199 CCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASEN 258
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
Y+L AVSNH G T + GHYTAYCR GTG W+ ++D+ V+P+ + V +++
Sbjct: 259 TNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSD 313
Query: 363 AEHGAYILVYQ 373
AY+L Y+
Sbjct: 314 ----AYLLFYE 320
>gi|363737746|ref|XP_003641901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Gallus
gallus]
Length = 1116
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 165/363 (45%), Gaps = 57/363 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F L +DI +G++ +
Sbjct: 772 PALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSNFLGHKGEVAEEFGVI 831
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 832 MKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 888
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + +A W+K + S+ +F GQ +
Sbjct: 889 KRYKEENNDHLDDLKAAELAWQKHKQLNESIIVALFQGQFK------------------- 929
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL ECL F
Sbjct: 930 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFS 970
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 971 KEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1030
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD V
Sbjct: 1031 ETLDLSQYVIGPKNNLKR---YNLFSVSNHYGGLD-GGHYTAYCKNASKQRWFKFDDHEV 1086
Query: 351 SPV 353
S +
Sbjct: 1087 SEI 1089
>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Sus scrofa]
Length = 606
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 186/386 (48%), Gaps = 69/386 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV------TV 379
Query: 121 YSNTSSKQVGSF----RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+S + + + W K+ E S D+FVGQ
Sbjct: 380 RPKSSPEGLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQ-------------------- 419
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLN 233
L+SS+ C++C STV++ FW+LSLP+ G TL +C+
Sbjct: 420 ------------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMR 461
Query: 234 KFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIK 287
F + L TC C+ + +K + +QR P +L+L KRFS + T K+T+ +
Sbjct: 462 LFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVN 521
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D
Sbjct: 522 FPLRDLDLREFASENINHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFND 576
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQ 373
+ VSP+ + V +++ AY+L Y+
Sbjct: 577 SSVSPMSSSQVRTSD----AYLLFYE 598
>gi|47230636|emb|CAF99829.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1046
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 175/405 (43%), Gaps = 83/405 (20%)
Query: 5 LNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
L G+ N GNTCY+NS+LQCL NTPA F N +DI +G++ + MK
Sbjct: 685 LTGLRNLGNTCYMNSILQCLCNTPALTEYFNNNYYMDDINRSNILGHKGEVAEEFGVIMK 744
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W+ ++ + + + ++F G QQD+QE LL+L+ L+E+ P N
Sbjct: 745 ALWAGLYKCISPRDFKITIGKINEQFAGYDQQDSQELLLFLMDGLHEDLNKAPAD-NRKR 803
Query: 121 YSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
Y + + A W K + S+ +F GQ +S+V+C C R S +E F L
Sbjct: 804 YKEEENDHLDDQTAADQAWSKHKLLNESIIVALFQGQFKSTVQCLTCHRKSRTFETFMYL 863
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SLP L S+ RCS L +CL F E
Sbjct: 864 SLP------------LASTSRCS-------------------------LQDCLRLFSKEE 886
Query: 240 TLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKR---------------------- 273
L + C++CK D K EI ++PP+L++ KR
Sbjct: 887 KLTDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRSVPLVLYAFVCVFFSCKNKISI 946
Query: 274 ------FSSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALY 327
+ + QK+ + + FP + LD+ Y+ ++ Y L VSNH G
Sbjct: 947 FLCRFSYEGRWKQKLQTSVDFPLDSLDLAQYVIGPKHSLKR---YSLYGVSNHYGGLD-G 1002
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
GHYTAYC+ RWY +DD VS + +V+S+ AYIL Y
Sbjct: 1003 GHYTAYCKSVLKQRWYKFDDHEVSDISTSSVKSS----AAYILFY 1043
>gi|62027426|gb|AAH92078.1| Usp8 protein, partial [Mus musculus]
Length = 419
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 75 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 134
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 135 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 194
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 195 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 232
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 233 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 274
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 275 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 334
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 335 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 386
>gi|395503242|ref|XP_003755979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Sarcophilus harrisii]
Length = 1069
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 725 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSNLLGHKGEVAEEFGII 784
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 785 MKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKAD---NR 841
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 842 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 882
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 883 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 923
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 924 KEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 983
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 984 ENLDLSQYVIGPKNNLKR---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1036
>gi|355778036|gb|EHH63072.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca fascicularis]
gi|383422691|gb|AFH34559.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y +++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|355692711|gb|EHH27314.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y +++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|380817804|gb|AFE80776.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y +++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|388453897|ref|NP_001252548.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
gi|387273381|gb|AFJ70185.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y +++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|126277553|ref|XP_001370028.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Monodelphis
domestica]
Length = 1102
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 758 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSNLLGHKGEVAEEFGII 817
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 818 MKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKAD---NR 874
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 875 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 915
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 916 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 956
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 957 KEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1016
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1017 ESLDLSQYVIGPKNNLKR---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1069
>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
Specific Inhibitor
Length = 396
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 60 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 119
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 120 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 176
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 177 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 217
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 218 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 258
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 259 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 318
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 319 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 371
>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
Length = 1120
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 776 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 835
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 836 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 892
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 893 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 933
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 934 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 974
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 975 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1034
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1035 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1087
>gi|395503240|ref|XP_003755978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Sarcophilus harrisii]
Length = 1100
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 756 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSNLLGHKGEVAEEFGII 815
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 816 MKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKAD---NR 872
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 873 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 913
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 914 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 954
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 955 KEEKLTDNNRFYCSHCKTRRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1014
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1015 ENLDLSQYVIGPKNNLKR---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1067
>gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens]
Length = 1118
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
abelii]
gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
abelii]
gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
Length = 1118
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan
troglodytes]
gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan
troglodytes]
gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan
troglodytes]
gi|410355753|gb|JAA44480.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355755|gb|JAA44481.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355757|gb|JAA44482.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355759|gb|JAA44483.1| ubiquitin specific peptidase 8 [Pan troglodytes]
Length = 1118
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|426379059|ref|XP_004056223.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Gorilla gorilla
gorilla]
Length = 1118
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 221 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 280
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 281 MKALWTGQYRYISPKDFKITVGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 337
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 338 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 378
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 379 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 419
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 420 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 479
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 480 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 532
>gi|157127579|ref|XP_001661099.1| ubiquitin specific protease 2, putative [Aedes aegypti]
gi|108872885|gb|EAT37110.1| AAEL010854-PA [Aedes aegypti]
Length = 934
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 177/383 (46%), Gaps = 63/383 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NS++QCLS+T N L + SK L + +K MW
Sbjct: 602 GLCGLWNIGNTCFMNSIIQCLSHTRELTNFLRQQSTTERGTSKDHKILAE-YTKLIKDMW 660
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL----AALNEEAKVVPDQYNGS 119
S +N + A S + + G+ QQDAQEFL + + ALNE K P N +
Sbjct: 661 SGTTRSVNPSELKYAFSSKHRMYSGSAQQDAQEFLRFFIDSLHCALNESVKREP--INRA 718
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ +V +A W+ + E S+ ++FVG LRS+++C+ C S ++ FW+L
Sbjct: 719 IEDDDMDNRV---KATMMWDWYSRVENSMIKNLFVGLLRSTLKCTYCNGASVTFDPFWDL 775
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SLP+P S CK L C++ F E
Sbjct: 776 SLPLPSTN--------------SRCK----------------------LENCMDMFVKEE 799
Query: 240 TLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQKVTSPIKFP---RE 291
+ TC CK + K I+R P L++ KRFS + ++ K+T+ ++FP RE
Sbjct: 800 VMDGIDQPTCSRCKARRKCTKSLTIERFPKYLVIHLKRFSETRWSNKLTNVVEFPTGERE 859
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L+++ Y S Y L +SNH+G TA GHY A C+ T W ++D VS
Sbjct: 860 -LNLQPYASEDH---SGPVNYSLYGISNHMGSTA-GGHYVAVCKHPVTKEWNEFNDNFVS 914
Query: 352 PVDAQTVESAEAEHGAYILVYQR 374
+T E + AY+L Y+R
Sbjct: 915 ----ETSERSLVTSSAYVLFYER 933
>gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens]
Length = 1118
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRAFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|148696217|gb|EDL28164.1| ubiquitin specific peptidase 8, isoform CRA_b [Mus musculus]
Length = 1119
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 775 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 834
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 835 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 894
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 895 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 932
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 933 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 974
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 975 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1034
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1035 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1086
>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
Length = 899
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 555 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 614
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 615 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 671
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 672 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 712
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 713 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 753
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 754 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 813
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 814 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 866
>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
Length = 1118
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Callithrix jacchus]
Length = 1118
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|148696216|gb|EDL28163.1| ubiquitin specific peptidase 8, isoform CRA_a [Mus musculus]
Length = 1108
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 764 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 823
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 824 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 883
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 884 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 921
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 922 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 963
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 964 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1023
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1024 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1075
>gi|357588457|ref|NP_001239509.1| ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Mus musculus]
Length = 1091
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 747 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 806
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 807 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 866
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 867 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 904
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 905 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 946
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 947 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1006
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1007 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1058
>gi|403274276|ref|XP_003928907.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1118
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 774 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 834 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 932 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 973 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085
>gi|74137217|dbj|BAE21996.1| unnamed protein product [Mus musculus]
Length = 1080
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 736 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 795
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 796 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 855
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 856 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 893
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 894 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 935
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 936 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 996 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1047
>gi|194383128|dbj|BAG59120.1| unnamed protein product [Homo sapiens]
Length = 1012
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 668 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 727
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 728 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 784
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 825
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 826 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 866
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 867 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 926
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 927 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 979
>gi|20071587|gb|AAH27052.1| Usp8 protein, partial [Mus musculus]
Length = 673
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 329 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 388
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 389 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 448
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 449 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 486
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 487 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 528
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 529 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 588
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 589 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 640
>gi|148696218|gb|EDL28165.1| ubiquitin specific peptidase 8, isoform CRA_c [Mus musculus]
Length = 1080
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 736 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 795
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 796 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 855
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 856 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 893
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 894 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 935
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 936 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 996 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1047
>gi|403274278|ref|XP_003928908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1012
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 668 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 727
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 728 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 784
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 825
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 826 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 866
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 867 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 926
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 927 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 979
>gi|31981044|ref|NP_062703.2| ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Mus musculus]
gi|44888442|sp|Q80U87.2|UBP8_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=mUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|29747898|gb|AAH50947.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|38181867|gb|AAH61465.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|42490777|gb|AAH66126.1| Ubiquitin specific peptidase 8 [Mus musculus]
Length = 1080
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 736 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 795
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 796 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 855
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 856 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 893
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 894 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 935
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 936 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 996 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1047
>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Callithrix jacchus]
Length = 1012
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 668 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 727
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 728 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 784
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 825
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 826 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 866
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 867 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 926
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 927 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 979
>gi|332843788|ref|XP_001168540.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pan
troglodytes]
Length = 1012
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 668 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 727
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 728 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 784
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 785 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 825
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 826 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 866
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 867 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 926
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 927 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 979
>gi|28972047|dbj|BAC65477.1| mKIAA0055 protein [Mus musculus]
Length = 1108
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 764 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 823
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 824 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 883
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 884 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 921
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 922 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 963
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 964 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1023
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1024 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1075
>gi|5058999|gb|AAD38869.1|AF057146_1 putative deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 736 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 795
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 796 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 855
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 856 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 893
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 894 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 935
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 936 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 996 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1047
>gi|74218724|dbj|BAE25218.1| unnamed protein product [Mus musculus]
Length = 988
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 644 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 703
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ ++
Sbjct: 704 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 763
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + + A H W+K + S+ +F GQ +
Sbjct: 764 KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 801
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 802 ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 843
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 844 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 903
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 904 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 955
>gi|157817586|ref|NP_001099972.1| ubiquitin carboxyl-terminal hydrolase 8 [Rattus norvegicus]
gi|149023197|gb|EDL80091.1| ubiquitin specific protease 8 (predicted) [Rattus norvegicus]
Length = 1081
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 737 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 796
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ N
Sbjct: 797 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKAD---NR 853
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 854 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 894
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 895 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 935
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 936 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 995
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 996 ENLDLSQYVIGPKSSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1048
>gi|348572270|ref|XP_003471916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cavia
porcellus]
Length = 1077
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 733 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 792
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 793 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKA---DNR 849
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 850 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 890
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C R S +E F LSLP+ TL +CL F
Sbjct: 891 -------------------STVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 931
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 932 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 991
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 992 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1044
>gi|351715023|gb|EHB17942.1| Ubiquitin carboxyl-terminal hydrolase 8 [Heterocephalus glaber]
Length = 1106
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 162/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 762 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQDDINRSNLLGHKGEVAEEFGII 821
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 822 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 878
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 879 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 919
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C R S +E F LSLP+ TL +CL F
Sbjct: 920 -------------------STVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 960
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 961 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1020
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1021 ENLDLSQYVIGPKHSLKK---YSLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1073
>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
griseus]
Length = 1079
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 735 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 794
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ N
Sbjct: 795 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKAD---NR 851
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 852 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 892
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 893 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 933
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 934 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 993
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 994 ENLDLSQYVIGPKSSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1046
>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
Length = 487
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 143 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 202
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 203 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 259
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 260 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 300
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 301 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 341
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 342 KEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 401
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 402 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 454
>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
Length = 1075
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 164/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 731 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 790
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL+L+ L+E+ N
Sbjct: 791 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKAD---NR 847
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 848 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 888
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 889 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 929
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 930 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 989
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 990 ENLDLSQYVIGPKSSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1042
>gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Nomascus leucogenys]
gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Nomascus leucogenys]
gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Nomascus leucogenys]
Length = 1117
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 773 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 832
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 833 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 889
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 890 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 930
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 931 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 971
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 972 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1031
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1032 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1084
>gi|441615298|ref|XP_004088287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Nomascus
leucogenys]
Length = 1011
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 667 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 726
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 727 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 783
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 784 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 824
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 825 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 865
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 866 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 925
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 926 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 978
>gi|410961241|ref|XP_003987192.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Felis
catus]
Length = 1087
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 743 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 802
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 803 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 859
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 860 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 900
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 901 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 941
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 942 KEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1001
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1002 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1054
>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
Length = 496
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 176/379 (46%), Gaps = 54/379 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT L + I+ S G L + + MK
Sbjct: 158 GLVGLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRYLKDINKSSSMNGMLFRSYADLMKE 217
Query: 62 MWSS--GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+W N + ++ + +F G QQD+QEFL Y+L L+ E V + +
Sbjct: 218 IWDPDMANSSTSPSRFKSQIQRFAPRFMGYSQQDSQEFLRYVLEGLHMEVNRVQKRPIPT 277
Query: 120 TYSNTSSKQV-GSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ ++ + +A YW ++ + + S D+FVGQL S++ C++C ST ++ FW+
Sbjct: 278 KPDYEAEDRLPDNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECADCSFKSTTFDPFWD 337
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P + +CLN F +
Sbjct: 338 LSLPIPKKPNV-------------------------------------NILDCLNLFTSK 360
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQKVTSPIKFPREGL 293
E L C CK + K + IQ+ P +L+L KRFS F K++ + +P L
Sbjct: 361 EELDGDERAICSRCKTRRRCTKSFSIQKFPQILVLHLKRFSGERFRSKMSVMVDYPLRNL 420
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
D+ + ++S + ++Y L AVSNH G + GHYTA C TG W+ ++D+ V +
Sbjct: 421 DLIEFATSSCTQKSAQYK--LYAVSNHSG-SVYTGHYTASCLNPYTGDWHSFNDSHVHLI 477
Query: 354 DAQTVESAEAEHGAYILVY 372
+ S+E Y+L Y
Sbjct: 478 SENSAISSE----GYVLFY 492
>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
melanoleuca]
gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
Length = 1116
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 772 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 831
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 832 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 888
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 889 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 929
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 930 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 970
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 971 KEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1030
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1031 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1083
>gi|57108191|ref|XP_535474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Canis
lupus familiaris]
Length = 1116
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 772 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 831
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 832 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 888
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 889 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 929
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 930 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 970
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 971 KEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1030
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1031 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1083
>gi|410961243|ref|XP_003987193.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Felis
catus]
Length = 1010
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 666 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 725
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 726 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 782
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 783 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 823
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 824 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 864
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 865 KEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 924
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 925 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 977
>gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus]
Length = 1088
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 744 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 803
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 804 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 860
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 861 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 901
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 902 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 942
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 943 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1002
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1003 ESLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1055
>gi|195568052|ref|XP_002107569.1| GD17542 [Drosophila simulans]
gi|194204979|gb|EDX18555.1| GD17542 [Drosophila simulans]
Length = 398
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 173/378 (45%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + +K Q Q++ +
Sbjct: 69 SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ-QILHEFAKLIHE 127
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW+S + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 128 MWTSNVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL 184
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 185 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 220
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 221 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLDACLDLFIREEV 265
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 266 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSE 323
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS DA
Sbjct: 324 LNMGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVS--DAL 380
Query: 357 TVESAEAEHGAYILVYQR 374
+ E+ AYIL Y+R
Sbjct: 381 S-ENHLVSSSAYILFYER 397
>gi|345794939|ref|XP_003433957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Canis lupus
familiaris]
Length = 1010
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 666 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 725
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 726 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 782
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +
Sbjct: 783 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 823
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 824 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 864
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 865 KEEKLTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 924
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 925 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 977
>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1201
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 178/406 (43%), Gaps = 84/406 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVL--------LNEDIPIHPDSKSQGQLVDAL 55
G +G+ N GNTCY+NS +QCLS T F +N P+ ++G L A
Sbjct: 842 GTSGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMVNPM----GTKGVLALAF 897
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
N ++ MW L+ ++ S+ +F G++Q D+QEFL +LL L+E+ + +
Sbjct: 898 ANILRDMWQGEGGTLSPVTFRRSICSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRILQK 957
Query: 116 YNGSTYSNTSS---KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
N + + K + W+ ++ + S+ D F GQ R+ +
Sbjct: 958 RNIESTPEREAELEKLPTQIASEQEWQIYRMRDDSLIVDFFQGQYRNRME---------- 1007
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLY 229
C C +TST Y F L+LP+P G TL
Sbjct: 1008 ----------------------------CLTCHKTSTTYNTFMYLTLPIPTGRASKVTLQ 1039
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVT 283
C++ F E + + C +CK K + RLPPVL++ KRFS+ FT K+
Sbjct: 1040 HCIDAFVKEEVMEKSDAWNCPHCKALRKATKQLSLSRLPPVLLIHLKRFSAKGPFTDKIE 1099
Query: 284 SPIKFPREGLDMEYY--------------ISASGRRVE-SRYTYDLCAVSNHIGKTALYG 328
+ ++FP +GLD+ Y +S R + Y YDL AV+NH G T G
Sbjct: 1100 TFVEFPLKGLDLTNYMPPPLPPGAIGVPPLSPDDPRCQLPPYRYDLYAVTNHFG-TLSTG 1158
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
HYTA+ G W DD+ V+P DA+ V AYIL Y+R
Sbjct: 1159 HYTAFIASRGG--WLYCDDSRVTPADAKDV----VGKPAYILFYKR 1198
>gi|392565337|gb|EIW58514.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1173
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 176/403 (43%), Gaps = 77/403 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
G G+ N GNTCY+NS +QCLS T F + + + ++G L +A N +
Sbjct: 813 GTTGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMMNPMGTKGNLANAFANIL 872
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQY 116
+ MW + L+ +L S+ +F G++Q D+QEFL +LL L+E+ + P
Sbjct: 873 REMWQGEHGTLSPVPFRRSLCSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRILAKPQVV 932
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+ + + W+ ++ + S+ D F GQ R+ +
Sbjct: 933 STPEREAELERLPTQIASEQEWQIYRMRDDSLVVDFFQGQYRNRME-------------- 978
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG----TLYECL 232
C C +TST Y F L+LPVPP G L +C+
Sbjct: 979 ------------------------CLTCHKTSTTYNTFMYLTLPVPPKSGNAKVPLQQCI 1014
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPI 286
+ F E + + C +CK K + RLPPVL++ KRFS+ FT K+ + +
Sbjct: 1015 DAFVKEEVMDKSDAWHCPHCKTLRKATKRLSLSRLPPVLLIHLKRFSAKGPFTDKIETTV 1074
Query: 287 KFPREGLDMEYYIS-------ASGRRVE--------SRYTYDLCAVSNHIGKTALYGHYT 331
+FP +GLD+ Y+ + G V+ Y YDL V+NH G + GHYT
Sbjct: 1075 EFPLKGLDLTNYMPPPLPPGVSGGSPVQPDDPRYQNPPYRYDLYGVTNHFGSLST-GHYT 1133
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
A+ G W DD+ V+ +A+ V AYIL Y+R
Sbjct: 1134 AFIASRGG--WLYCDDSRVTSAEAKDVVGKP----AYILFYKR 1170
>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
guttata]
Length = 1087
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 165/367 (44%), Gaps = 65/367 (17%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F L DI +G++ +
Sbjct: 743 PALTGLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSNFLGHKGEVAEEFGVI 802
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD---- 114
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ +
Sbjct: 803 MKALWAGQYKYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKADNRKRY 862
Query: 115 -QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
+ N ++S+ ++ W K + S+ +F GQ +
Sbjct: 863 KEENNDHLDDSSAAEIA-------WHKHKQLNESIIVALFQGQFK--------------- 900
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECL 232
S+V+C C + S +E F LSLP+ TL ECL
Sbjct: 901 -----------------------STVQCLTCHKRSRTFEAFMYLSLPLASSSKCTLQECL 937
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPI 286
F E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + +
Sbjct: 938 RLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSV 997
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
FP E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +D
Sbjct: 998 DFPLETLDLSQYVIGPKTSLKR---YNLFSVSNHYGGLD-GGHYTAYCKNASKQRWFKFD 1053
Query: 347 DTVVSPV 353
D VS +
Sbjct: 1054 DHEVSEI 1060
>gi|297787764|pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
gi|297787766|pdb|3MTN|C Chain C, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
Length = 373
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 178/395 (45%), Gaps = 69/395 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMK 60
S G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + +
Sbjct: 19 SSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIG 78
Query: 61 MMWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-----KVVPD 114
+W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 79 ALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPI 138
Query: 115 QYNGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C
Sbjct: 139 LANGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQ 196
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
C ST +E+F +LSLP+P G G
Sbjct: 197 ACGYRSTTFEVFCDLSLPIPKKG---------------------------------FAGG 223
Query: 225 GGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--F 278
+L +C N F E L + C C++++ K +QR P +L+L RFS++
Sbjct: 224 KVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGS 283
Query: 279 TQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
+K + + FP + L + + S Y L A+ NH G + YGHYTA CR +
Sbjct: 284 IKKSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ- 337
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
TG W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 338 TG-WHVYNDSRVSPVSENQVASSE----GYVLFYQ 367
>gi|390179554|ref|XP_003736924.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859895|gb|EIM52997.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 328
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 169/366 (46%), Gaps = 63/366 (17%)
Query: 17 INSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKMMWSSGNLVLNTKA 74
+NS+LQCLSNTP L++ I +K+ GQ+++ + +K +W+ + ++
Sbjct: 1 MNSILQCLSNTPQLTEYCLSDKYKNYISRSNKTNGQVIEEVAALIKELWNGQYKCVASRD 60
Query: 75 ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRA 134
+ + Y F G QQD+ EFL L+ L+ + + + + S + A
Sbjct: 61 LRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHSDLQTL----------DVSRMRETIGAA 110
Query: 135 LHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQ 194
W F + S+ +F GQ++S
Sbjct: 111 EQAWLDFTKAKESIILHLFYGQMKS----------------------------------- 135
Query: 195 LRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECLNKFFNGETLHN-TCQYCKKQ 251
+V+C C + S YE F LSL +PP L +C++ +F+GE + C CK +
Sbjct: 136 ---TVKCVTCNKESATYECFSNLSLELPPNANECQLNQCMDMYFSGERIQGWNCPNCKTK 192
Query: 252 SDLVKLYEIQRLPPVLILWFKRFSSNFTQ-----KVTSPIKFPREGLDMEYYISASGRRV 306
+K +I +LPPVL++ KRF ++ + K + + FP + L+M YI+ + R
Sbjct: 193 RAAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLEMSPYIARAESRA 252
Query: 307 ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHG 366
TY L AVSNH G T GHYTA+C+ GRWY +DD VVS +D V S+
Sbjct: 253 AKPKTYQLYAVSNHYG-TMEGGHYTAFCKSPNYGRWYKFDDQVVSTLDTSNVISS----A 307
Query: 367 AYILVY 372
AYIL Y
Sbjct: 308 AYILFY 313
>gi|345492284|ref|XP_001603431.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Nasonia
vitripennis]
Length = 864
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 190/408 (46%), Gaps = 44/408 (10%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQGQLVDALVNFMKMM 62
GL G+ N GNTCY+NS LQ LSN P L+ + + + L + +N ++ M
Sbjct: 185 GLVGLQNIGNTCYMNSALQALSNVPPLTQFFLDCAHMVSYVARDRKPGLSLSYLNLIREM 244
Query: 63 WSSGNLVLNT-KAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK----------- 110
W+ AIL +R+ F G Q D QEFL + L+EE K
Sbjct: 245 WNKRTRGYTVPHAILTGIRTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEEXXXXXX 304
Query: 111 -VVPDQYNGSTYSN-------TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVR 162
+ +++ + T ++ + + K Q S+ SDIF G+L SSV+
Sbjct: 305 XXLRNKFTSRSVKKGTADVTYTQQQRSSQSSPVKHHSKKQMKTRSIISDIFDGKLLSSVQ 364
Query: 163 CSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNCKRTSTVYE----IFWE 216
C C R ST E F +LSLP+P +++ L + + S C V I W
Sbjct: 365 CLTCDRISTRIETFQDLSLPIPSRDHINMIHQGSL-TPQKASPCSDVVYVTNQSGWISWF 423
Query: 217 LSLPVPPGGG---TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLIL 269
L L G +L++CL+ FF+ + L +C+ C K + +K ++ LP VL +
Sbjct: 424 LQLMRSWLWGPTVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEVLCV 483
Query: 270 WFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALY 327
KRF F+ K+ S + FP E L+M ++ V +YDL +V H G TA
Sbjct: 484 HLKRFRHELMFSSKIASYVSFPLEDLEMRPHLHKDC--VSKETSYDLISVICHHG-TAGG 540
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHY Y T +W+ +DD V+PV +TV++ GAY+L Y++R
Sbjct: 541 GHYVCYALNPITNQWFEFDDQCVTPVSRETVQNC----GAYVLFYRKR 584
>gi|60552608|gb|AAH90946.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
+C N F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 418 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|47224895|emb|CAG06465.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 178/367 (48%), Gaps = 39/367 (10%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT + R+ L+ ++ +S++ L++ ++
Sbjct: 59 GLVGLKNLGNTCFMNSILQCLSNTHSLRDYCLHNAHRRDLNNNSRTNTALMEEFAKLLQT 118
Query: 62 MWSS-GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W+S + ++ ++ Y +F G QQDAQEFL +LL L+ E V + GS
Sbjct: 119 VWTSPSSEAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTVRPRGSA 178
Query: 121 --YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ ++ G W K+ E S D+FVGQL+SS+ CS+C STV++ FW+
Sbjct: 179 EDLDHLPDEEKGK----KMWSKYLEREDSKIVDLFVGQLKSSLTCSHCGFCSTVFDPFWD 234
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPV-----------PPGGGT 227
LSLP+ G ++ V +C R T +I PV P T
Sbjct: 235 LSLPIAKKGYSM--------VSLMDCMRLFTKEDILDGDEKPVRSTATDASRLFPVAVVT 286
Query: 228 -----LYECLNKFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQK 281
L+ + + + +H + + D Y P KRFS + T K
Sbjct: 287 ALTLLLFTDVLQVQSPAEMHQEVHHTEVPQDPGAAYPFPTRPRRHGDDLKRFSEARRTSK 346
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+++ + FP + LDM + S S + Y L AVSNH G T + GHYTAYCR +G
Sbjct: 347 LSTFVSFPMKDLDMREFSSDSS----TNAVYSLYAVSNHSG-TTMGGHYTAYCRNPSSGE 401
Query: 342 WYLYDDT 348
WY ++D+
Sbjct: 402 WYTFNDS 408
>gi|62243586|ref|NP_001014443.1| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|74027267|ref|NP_036607.3| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|10720334|sp|Q9UK80.1|UBP21_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853113|gb|AAD54321.1|AF177758_1 ubiquitin specific protease 16 [Homo sapiens]
gi|119573029|gb|EAW52644.1| ubiquitin specific peptidase 21, isoform CRA_c [Homo sapiens]
gi|158258070|dbj|BAF85008.1| unnamed protein product [Homo sapiens]
gi|223460370|gb|AAI36292.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 418 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|355558658|gb|EHH15438.1| hypothetical protein EGK_01528 [Macaca mulatta]
gi|355745834|gb|EHH50459.1| hypothetical protein EGM_01292 [Macaca fascicularis]
gi|380811730|gb|AFE77740.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|383417519|gb|AFH31973.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|384946444|gb|AFI36827.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|410219870|gb|JAA07154.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410219872|gb|JAA07155.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410302294|gb|JAA29747.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410351841|gb|JAA42524.1| ubiquitin specific peptidase 21 [Pan troglodytes]
Length = 565
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 418 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|297280506|ref|XP_001117779.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 6
[Macaca mulatta]
Length = 595
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 240 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 299
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 300 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 359
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 360 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 417
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 418 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 447
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 448 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 504
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 505 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 558
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 559 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 586
>gi|301620627|ref|XP_002939670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Xenopus
(Silurana) tropicalis]
Length = 1059
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 172/381 (45%), Gaps = 59/381 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL NTP N H + + +G++ +
Sbjct: 715 PALTGLRNLGNTCYMNSILQCLCNTPHLIEYFNNNFYQAHINRSNLLGHKGEVAEEFGCI 774
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
M+ +W+ ++ K + + ++F G QD+QE LL+L+ L+E+ D
Sbjct: 775 MRALWTGQYKYISPKDFKITIGKINEQFAGYTHQDSQELLLFLMDGLHEDLNKKADNRKR 834
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
N + S A W K + S+ +F GQ +
Sbjct: 835 QKEEN-NDHLSDSQAADSAWYKHKQLNESIIVALFQGQFK-------------------- 873
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
S+V+C C++ S +E F LSLP+P +L +C+ F
Sbjct: 874 ------------------STVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLQDCIKAFAK 915
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L ++ C CK Q K EI +LPP+L++ KRFS + QK+ S + FP E
Sbjct: 916 EEKLTDSNRFDCSNCKTQRVATKKIEIWKLPPILLVHLKRFSFEGRWRQKLQSYVDFPLE 975
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ Y+ ++ TY+L VSNH G GHYTAYC+ RW+ +DD VS
Sbjct: 976 SLDLSQYVIGP----KNVKTYNLFGVSNHYGGLD-GGHYTAYCKNALKQRWFKFDDHDVS 1030
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ +V+++ AY+L Y
Sbjct: 1031 EISVSSVKTS----AAYMLFY 1047
>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus rotundus]
Length = 1116
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 162/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 772 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 831
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 832 MKALWTGQYRYISPKDFKTTIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 888
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A Y W+K + S+ +F GQ +
Sbjct: 889 KRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVALFQGQFK------------------- 929
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 930 -------------------STVQCLTCHKRSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 970
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 971 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1030
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1031 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1083
>gi|410986643|ref|XP_003999619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Felis catus]
gi|410986645|ref|XP_003999620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Felis catus]
gi|410986647|ref|XP_003999621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Felis catus]
Length = 566
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 178/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 211 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 270
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 271 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAAPILA 330
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
+G+ S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 331 SGAAASQP--RRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 388
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 389 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 418
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 419 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 475
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 KSSVGVDFPLQRLSLGDFASDKA----GSPIYQLYALCNHSG-SVHYGHYTALCRCQ-TG 529
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 530 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 557
>gi|48257066|gb|AAH03130.2| USP21 protein, partial [Homo sapiens]
Length = 477
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 122 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 181
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-----KVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 182 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 241
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 242 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 299
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 300 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 329
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 330 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 386
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 387 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 440
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 441 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 468
>gi|126310809|ref|XP_001371948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Monodelphis
domestica]
Length = 564
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 178/393 (45%), Gaps = 68/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED--IPIHPDSKSQGQLVDALVNFMKM 61
G G+ N GNTC++N+VLQCLS+T R+ L D + + ++Q +L +A + +
Sbjct: 208 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRLEVPSGGRTQQELTEAFADVLGA 267
Query: 62 MWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQY 116
+W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 268 LWHPDSCEAVNPTRFRTVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL 327
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
T + + ++ G+ +A W+++ E S D+FVGQL+S ++C C
Sbjct: 328 T-DTPAPSLPRRGGALLEEPELSDDDQANLMWKRYLDREDSKIVDLFVGQLKSCLKCQAC 386
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 387 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 416
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C + F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 417 ---DCFSLFTKEEELESENAPVCDRCRQRTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 473
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR G
Sbjct: 474 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCR--GQT 526
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 527 GWHVYNDSRVSPVSENQVASSE----GYVLFYQ 555
>gi|194763591|ref|XP_001963916.1| GF21001 [Drosophila ananassae]
gi|190618841|gb|EDV34365.1| GF21001 [Drosophila ananassae]
Length = 1296
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 175/378 (46%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + +K Q Q++ ++
Sbjct: 967 SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSSTKDQ-QILHEFAKLIQE 1025
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW+S + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 1026 MWTSNVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL 1082
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 1083 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 1118
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 1119 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEV 1163
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP +D E
Sbjct: 1164 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPT--MDRE 1221
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS DA
Sbjct: 1222 LNMGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVS--DAL 1278
Query: 357 TVESAEAEHGAYILVYQR 374
+ E+ AYIL Y+R
Sbjct: 1279 S-ENFLVSSSAYILFYER 1295
>gi|345496176|ref|XP_001603604.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Nasonia
vitripennis]
Length = 1000
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 181/384 (47%), Gaps = 65/384 (16%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNT----PAFRNVLLNEDIPIHPDSKSQGQLVDALV 56
+ PG+ G+ N GN+CY+NS++QCLSNT F + + + + D ++G + + +
Sbjct: 659 LHPGITGLKNLGNSCYMNSIIQCLSNTVYLAKYFNDNKYTDHLNRNIDKVARGYVAEEVA 718
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-VVPDQ 115
+K +W ++ + + + Y +F+ QQD+ EFL++LL ++ + K + +
Sbjct: 719 QVIKALWRGQYKSISPRDLKNVIGQYKMQFENFDQQDSHEFLMFLLDWMHNDLKQKIKTR 778
Query: 116 YNGS-TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
Y+ + T + T WEK ++SV S +F GQ
Sbjct: 779 YDRALTIAETE------------WEKSMNGQSSVISKLFFGQ------------------ 808
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLN 233
LRS++ C C + ST YE F L++ +P TL EC+
Sbjct: 809 --------------------LRSTIECLYCNQNSTTYETFNSLTMSLPTTNKCTLDECVK 848
Query: 234 KFFNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPR 290
KF +G+ + C CK + +K ++I +LP ++++ RF +S + +K + + FP
Sbjct: 849 KFVSGQRVSGWKCPNCKVPREGMKKFDIAKLPHIIVIHLNRFGETSGWLEKKNTAVDFPL 908
Query: 291 EGLDMEYYISASGRRVESR--YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
M +Y+ + Y Y+L A+SNH G T GHYTAYC+ +WY YDD
Sbjct: 909 TNFIMRHYVVQDNDNFNNSQSYNYNLYAMSNHYG-TMEGGHYTAYCKSNHQNKWYKYDDH 967
Query: 349 VVSPVDAQTVESAEAEHGAYILVY 372
VS V A V++ AY+L Y
Sbjct: 968 TVSEVQANVVKNQST--SAYLLFY 989
>gi|195356149|ref|XP_002044543.1| GM11729 [Drosophila sechellia]
gi|194132165|gb|EDW53792.1| GM11729 [Drosophila sechellia]
Length = 1022
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 174/378 (46%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + +K Q Q++ ++
Sbjct: 693 SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ-QILHEFAKLIQE 751
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW+S + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 752 MWTSNVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL 808
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 809 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 844
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 845 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLDACLDLFIREEV 889
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 890 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSE 947
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS DA
Sbjct: 948 LNMGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVS--DAL 1004
Query: 357 TVESAEAEHGAYILVYQR 374
+ E+ AYIL Y+R
Sbjct: 1005 S-ENHLVSSSAYILFYER 1021
>gi|19920418|ref|NP_608462.1| CG14619, isoform A [Drosophila melanogaster]
gi|24643789|ref|NP_728453.1| CG14619, isoform D [Drosophila melanogaster]
gi|24643791|ref|NP_728454.1| CG14619, isoform E [Drosophila melanogaster]
gi|17862942|gb|AAL39948.1| SD04280p [Drosophila melanogaster]
gi|22832690|gb|AAF50952.2| CG14619, isoform A [Drosophila melanogaster]
gi|22832691|gb|AAN09564.1| CG14619, isoform D [Drosophila melanogaster]
gi|22832692|gb|AAN09565.1| CG14619, isoform E [Drosophila melanogaster]
Length = 856
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 174/378 (46%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + +K Q Q++ ++
Sbjct: 527 SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ-QILHEFAKLIQE 585
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW++ + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 586 MWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL 642
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 643 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 678
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 679 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEV 723
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 724 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSE 781
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS DA
Sbjct: 782 LNMGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVS--DAL 838
Query: 357 TVESAEAEHGAYILVYQR 374
+ E+ AYIL Y+R
Sbjct: 839 S-ENHLVSSSAYILFYER 855
>gi|417411771|gb|JAA52312.1| Putative ubiquitin carboxyl-terminal hydrolase 21, partial
[Desmodus rotundus]
Length = 583
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 178/392 (45%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 228 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 287
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 288 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPAILA 347
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S + ++ ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 348 NSP-APSAPRRGGALLEEPDLSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 406
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 407 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 435
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 436 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKK 493
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S TY L A+ NH G + YGHYTA CR + TG
Sbjct: 494 SSVGVDFPLQRLSLGDFASDKA----GSPTYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 546
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 547 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 574
>gi|195482373|ref|XP_002102021.1| GE17938 [Drosophila yakuba]
gi|194189545|gb|EDX03129.1| GE17938 [Drosophila yakuba]
Length = 1409
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 171/378 (45%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + +K Q Q++ ++
Sbjct: 1080 SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSSTKDQ-QILHEFAKLIQE 1138
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW+S + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 1139 MWTSNVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL 1195
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 1196 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 1231
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 1232 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEV 1276
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 1277 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSE 1334
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS
Sbjct: 1335 LNMGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVSEA--- 1390
Query: 357 TVESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 1391 LSENHLVSSSAYILFYER 1408
>gi|395822737|ref|XP_003784667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Otolemur
garnettii]
Length = 1087
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 162/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 743 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 802
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 803 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 859
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A W+K + S+ +F GQ +
Sbjct: 860 KRHKEENNDHLDDFKAAEQAWQKHKQLNESIIVALFQGQFK------------------- 900
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 901 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 941
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 942 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1001
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1002 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1054
>gi|410899749|ref|XP_003963359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Takifugu
rubripes]
Length = 411
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 176/386 (45%), Gaps = 60/386 (15%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
+ G G+ N GNTC++N+++QCLS+T R+ +L + +K +L +A +
Sbjct: 58 LGSGRIGLRNIGNTCFLNAIVQCLSHTCGLRDYVLLKRYRQEKCAKEDAKLTEAFSQVLT 117
Query: 61 MMWSSGNLV--LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+W V +N + + F G QQDAQEFL +LL L+ E P Y
Sbjct: 118 GLWEETEAVSVVNPRQFYNVFKEAVPYFSGYSQQDAQEFLRFLLDKLHVEINRRP--YVR 175
Query: 119 STYSNTSSKQVGSFR----ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
T T+ K FR A W+K + S D+F GQLRSS+ CS C S ++
Sbjct: 176 RTVKETTQK-YARFRISEEAAVMWKKHLERDDSRIVDLFSGQLRSSLHCSVCSHYSNTFD 234
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNK 234
+F +LSLP+P RSS R E+ L +CL+
Sbjct: 235 VFCDLSLPIPK----------RSSGR-----------EVM-------------LKDCLDL 260
Query: 235 FFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKF 288
F E L C+ C + ++ K IQR P V+++ RF+ + K T + F
Sbjct: 261 FSQEEKLDRENSPMCERCTRHTECTKRLSIQRFPQVIVIHLNRFTMSRWSISKSTVYVSF 320
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P LD+ Y V YDL A+ NH+G T GHYTA C E W LY+D+
Sbjct: 321 PLTNLDLGPYGPVDCGPV----LYDLYAICNHVG-TVNMGHYTACCLDENG--WCLYNDS 373
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQR 374
V+PV +++ + AY+L YQR
Sbjct: 374 SVTPVSENQLQTNQ----AYVLFYQR 395
>gi|24643793|ref|NP_728455.1| CG14619, isoform C [Drosophila melanogaster]
gi|386764876|ref|NP_001245799.1| CG14619, isoform F [Drosophila melanogaster]
gi|386764878|ref|NP_001245800.1| CG14619, isoform G [Drosophila melanogaster]
gi|22832693|gb|AAN09566.1| CG14619, isoform C [Drosophila melanogaster]
gi|28317311|gb|AAO39652.1| AT11044p [Drosophila melanogaster]
gi|262331596|gb|ACY46087.1| MIP13335p [Drosophila melanogaster]
gi|383293538|gb|AFH07511.1| CG14619, isoform F [Drosophila melanogaster]
gi|383293539|gb|AFH07512.1| CG14619, isoform G [Drosophila melanogaster]
Length = 938
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 174/378 (46%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + +K Q Q++ ++
Sbjct: 609 SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ-QILHEFAKLIQE 667
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW++ + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 668 MWTANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL 724
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 725 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 760
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 761 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEV 805
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 806 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSE 863
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS DA
Sbjct: 864 LNMGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVS--DAL 920
Query: 357 TVESAEAEHGAYILVYQR 374
+ E+ AYIL Y+R
Sbjct: 921 S-ENHLVSSSAYILFYER 937
>gi|149408831|ref|XP_001507996.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Ornithorhynchus anatinus]
Length = 1116
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 161/357 (45%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F EDI +G++ +
Sbjct: 772 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQEDINRSNLLGHKGEVAEEFGII 831
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 832 MKALWTGQYRYISPKDFKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKAD---NR 888
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + RA W K + S+ +F GQ +
Sbjct: 889 KRHKEENNDHLDDCRAAELAWHKHKQLNESIIVALFQGQFK------------------- 929
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ +L +CL F
Sbjct: 930 -------------------STVQCLTCHKRSRTFEAFMYLSLPLASTSKCSLQDCLRLFS 970
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +CK + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 971 KEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYEGRWKQKLQTSVDFPL 1030
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ S ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 1031 ESLDLSQYVIGSKSSLKR---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1083
>gi|10720332|sp|Q9QZL6.1|UBP21_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853115|gb|AAD54322.1|AF177759_1 ubiquitin specific protease 16 [Mus musculus]
gi|18257320|gb|AAH21903.1| Ubiquitin specific peptidase 21 [Mus musculus]
Length = 566
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 173/392 (44%), Gaps = 66/392 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
+ + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 389
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 390 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 418
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 419 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKK 476
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 477 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 529
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 530 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 557
>gi|224809307|ref|NP_038947.2| ubiquitin carboxyl-terminal hydrolase 21 [Mus musculus]
Length = 566
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 173/392 (44%), Gaps = 66/392 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
+ + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 389
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 390 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 418
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 419 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKK 476
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 477 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 529
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 530 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 557
>gi|194897797|ref|XP_001978724.1| GG19743 [Drosophila erecta]
gi|190650373|gb|EDV47651.1| GG19743 [Drosophila erecta]
Length = 1414
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 171/378 (45%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + +K Q Q++ ++
Sbjct: 1085 SEGLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSATKDQ-QILHEFAKLIQE 1143
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW+S + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 1144 MWTSNVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL 1200
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 1201 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 1236
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 1237 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEV 1281
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 1282 LDGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSE 1339
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS
Sbjct: 1340 LNMGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVSEA--- 1395
Query: 357 TVESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 1396 LSENHLVSSSAYILFYER 1413
>gi|93279989|pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin
Carboxyl-terminal Hydrolase 8
Length = 396
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 160/357 (44%), Gaps = 57/357 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY NS+LQCL N P F +DI +G++ +
Sbjct: 60 PALTGLRNLGNTCYXNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 119
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
K +W+ ++ K + + +F G QQD+QE LL+L L+E+ N
Sbjct: 120 XKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLXDGLHEDLNKAD---NR 176
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 177 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 217
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 218 -------------------STVQCLTCHKKSRTFEAFXYLSLPLASTSKCTLQDCLRLFS 258
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP
Sbjct: 259 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 318
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 319 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 371
>gi|384494007|gb|EIE84498.1| hypothetical protein RO3G_09208 [Rhizopus delemar RA 99-880]
Length = 837
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 177/395 (44%), Gaps = 67/395 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK----SQGQLVDALVNFM 59
G G+ N GNTCY+NS++QCLS T F ++ H + + + G L + +
Sbjct: 482 GGTGLKNLGNTCYMNSIIQCLSGTIPFARYFISGLYKQHINKENFLGTGGVLANEFATLL 541
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQY 116
+ MW + ++ A+ ++ +F G++Q D+QEFL +LL L+E+ ++ P Q
Sbjct: 542 RSMWGANCNFISPVQFREAITQFSPQFKGSEQHDSQEFLNFLLDGLHEDCNLIKKRPSQP 601
Query: 117 NGSTYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
S +++ ++A WEK+ +SV +F GQ
Sbjct: 602 PESPEEEARFERLPDWKASAVAWEKYLERNSSVVVSLFQGQY------------------ 643
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP-----PGGGTLYE 230
RS + C C TST Y F LSLP+P P LY+
Sbjct: 644 --------------------RSRLTCLTCHTTSTTYNSFMSLSLPIPATRTSPATVNLYQ 683
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTS 284
CL+ F ETL + C CKK K I +LP VL++ KRFS + F K+ +
Sbjct: 684 CLDYFVKEETLDDDDAWHCPRCKKLCRASKSLTISKLPDVLLIHLKRFSFDGPFNNKLET 743
Query: 285 PIKFPREGLDMEYYISAS-----GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
+ P GLD+ Y+ +S +S ++YDL AVSNH G + GHYTA R
Sbjct: 744 MVDSPIRGLDLSKYVPSSMFPPDQPSEKSTFSYDLYAVSNHYG-SLTGGHYTACVRNGYR 802
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
W+ +DDT +S D ES AY L Y R
Sbjct: 803 NEWHNFDDTRLSVCD----ESKIMSRAAYNLFYVR 833
>gi|355727944|gb|AES09362.1| ubiquitin specific peptidase 21 [Mustela putorius furo]
Length = 592
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 177/392 (45%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 237 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 296
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 297 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 355
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 356 ASSPAPSQPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 415
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 416 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 444
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 445 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 502
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 503 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 555
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 556 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 583
>gi|195392830|ref|XP_002055057.1| GJ19166 [Drosophila virilis]
gi|194149567|gb|EDW65258.1| GJ19166 [Drosophila virilis]
Length = 938
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 167/376 (44%), Gaps = 53/376 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NSV+QCLS+T L + Q++ ++ MW
Sbjct: 610 GLCGLRNIGNTCFMNSVIQCLSHTTELTRFLRAHHTSTRTATSKDQQILHEFAKLIQEMW 669
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
++ + + A + + + QQDAQEFL + L +L+ + G T N
Sbjct: 670 TTNVHSVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNTGVKGETL-N 725
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ +A WE + E S+ D+FVGQL+
Sbjct: 726 IDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLK------------------------- 760
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETLH 242
S+++C+ C TS ++ FW+LS+P+P L CL+ F E L
Sbjct: 761 -------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLD 807
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYY 298
TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 808 GDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPT--ADRELN 865
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+++ G S Y L A+SNH+G TA GHY A C+ + +W+ ++D VS
Sbjct: 866 MASYGANANSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSHKWHEFNDNSVSDA---IP 921
Query: 359 ESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 922 ENCLVSSSAYILFYER 937
>gi|332219294|ref|XP_003258791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Nomascus
leucogenys]
Length = 565
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 174/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 118 GSTYSNTSSKQVGSFR----------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
+ T K+ GS R A W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NVQFPLTRRKR-GSLREQMEASDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQK 281
+C N F E L + C C++++ K +QR P +L L RFS++ +K
Sbjct: 418 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|195058982|ref|XP_001995537.1| GH17708 [Drosophila grimshawi]
gi|193896323|gb|EDV95189.1| GH17708 [Drosophila grimshawi]
Length = 847
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 171/377 (45%), Gaps = 55/377 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI-PIHPDSKSQGQLVDALVNFMKMM 62
GL G+ N GNTC++NSV+QCLS+T L + P SK Q Q++ ++ M
Sbjct: 519 GLCGLRNIGNTCFMNSVIQCLSHTTELTRFLRGHNASPRSATSKDQ-QILHEFAKLIQEM 577
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
W++ + + A + ++ QQDAQEFL + L +L+ + G T
Sbjct: 578 WTTNVHSVTPMELKRAFSLKHRMYNDYNQQDAQEFLRFFLDSLHS---ALNTGVKGETL- 633
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
N + +A WE + E S+ D+FVGQL+
Sbjct: 634 NIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLK------------------------ 669
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETL 241
S+++C+ C TS ++ FW+LS+P+P L CL+ F E L
Sbjct: 670 --------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLESCLDLFIREEVL 715
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 716 DGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFP--TADREL 773
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
+++ G S Y L A+SNH+G TA GHY A C+ + +W+ ++D VS
Sbjct: 774 NMASYGANANSNVHYSLYAISNHMGSTA-GGHYVAICKHPVSHKWHEFNDNSVSD---SI 829
Query: 358 VESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 830 PENCLVSSSAYILFYER 846
>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
Length = 1063
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 171/381 (44%), Gaps = 60/381 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL NTP F DI +G++ +
Sbjct: 720 PALTGLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSNLLGHKGEVAEEFGCI 779
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + ++F G QD+QE LL+L+ L+E+ ++
Sbjct: 780 MKALWTGQYKCISPKDFKITIGKINEQFAGYSHQDSQELLLFLMDGLHEDLNKADNRKRQ 839
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N S A W K + S+ +F GQ
Sbjct: 840 KEENN--DHLSDSQAADSAWYKHKQLNESIIVSLFQGQF--------------------- 876
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
+S+V+C C++ S +E F LSLP+P +L +C+ F
Sbjct: 877 -----------------KSTVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLKDCIKAFAK 919
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L ++ C CK Q K EI +LPP+L++ KRFS + QK+ + + FP E
Sbjct: 920 EEKLTDSNRFDCSNCKTQRVATKKIEIWKLPPILLVHLKRFSFEGRWRQKLQAYVDFPLE 979
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ Y+ +S Y+L VSNH G GHYTAYC+ RW+ +DD VS
Sbjct: 980 SLDLSPYVIGP----KSSKKYNLFGVSNHYGGLD-GGHYTAYCKNALKQRWFKFDDHDVS 1034
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ +V+++ AY+L Y
Sbjct: 1035 DISVSSVKTS----AAYMLFY 1051
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 46/380 (12%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL----NEDIPIHPDSKSQGQLVDALVNFM 59
G G+ N GNTC++NS LQCLSN + L + +I I S G ++ A N +
Sbjct: 165 GKVGLINLGNTCFMNSALQCLSNLQPLTDYCLQNKEDNEINIQNPMGSGGVVIKAFANLV 224
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQY 116
+ +W+ ++ L + + K + +QQD+QEFLLYLL ++E+ V P
Sbjct: 225 RQIWNQKEDSVSPDEFLRVISYFNKIYSSGRQQDSQEFLLYLLDQIHEDLNRVEKKPYVE 284
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+ N + K++ A W + SV D+F GQL+++++C CK +E F
Sbjct: 285 QKEYFKNLNQKELEKL-AADSWGDYLKRNKSVIVDLFQGQLKNTLKCLKCKTAKYQFEPF 343
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
L++P+P + + +C T EI G K+F
Sbjct: 344 MYLTVPIPQKA--------ENEINIQDCIEQFTEKEIL---------DGDE------KWF 380
Query: 237 NGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLD 294
C CK K ++ +LPP+L++ KRF ++ +K+T+ ++FP + D
Sbjct: 381 --------CPECKDFQKSEKKIDLWKLPPILMICMKRFQYTAQSKKKITTKVQFPVQHFD 432
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
M +I + ++ + YDL +V +H G +GHY AYC+ + +WYL++D+ S +
Sbjct: 433 MSEFIPKTLQK--EKPIYDLFSVISHKGYLN-FGHYVAYCKNQEDKQWYLFNDSKTSLI- 488
Query: 355 AQTVESAEAEHGAYILVYQR 374
Q E + AY+L YQ+
Sbjct: 489 -QDPEENIPKKEAYVLFYQK 507
>gi|156366016|ref|XP_001626937.1| predicted protein [Nematostella vectensis]
gi|156213831|gb|EDO34837.1| predicted protein [Nematostella vectensis]
Length = 359
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 188/385 (48%), Gaps = 44/385 (11%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFM 59
S GL G+ N GNTC++NS+LQCLS+T N++L I+ S +G+LV A + +
Sbjct: 2 SDGLVGLRNLGNTCFMNSILQCLSSTWLLTNIVLKGTYVSSINNKSSMKGRLVQAFADLI 61
Query: 60 KMMW--SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ-- 115
K MW + ++ A ++ + +F G QQDAQEFL +LL L+++ V ++
Sbjct: 62 KSMWKHDATESAISAHAFKTQIQRFAPRFVGFNQQDAQEFLHFLLEGLHDDLNKVQEKPK 121
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
Y + N+ S + +A W+ + + S+ +D+FVG L+S++ C C S ++
Sbjct: 122 YKMCEFDNSLSDLEKAKKA---WKLYIERDNSLITDLFVGVLKSTLICLECGFKSVTFDP 178
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
FW+LSLP+P G+ Y + G + +C+ F
Sbjct: 179 FWDLSLPIPRKSGSRYSSSRYTD------------------------GGDVDIRDCMELF 214
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS-NFTQKVTSPIKFPR 290
E L TC+ CKK+ K + +QR P +L++ KRFS F K+ + + FP
Sbjct: 215 TKEEVLDGDERPTCEKCKKKRKSTKKFTVQRFPRILVIHLKRFSGYGFRSKLQTNVVFPV 274
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
+A +S Y L AVSNH G T GHYTAYC+ + +W+ ++D+ V
Sbjct: 275 TSPQELGEFAADPSEGQSA-VYSLYAVSNHSGST-YGGHYTAYCKHPQSRQWHCFNDSRV 332
Query: 351 SPVDAQTVESAEAEHGAYILVYQRR 375
+ + V + AYIL +++
Sbjct: 333 DQISSSRVTGPQ----AYILFFEKH 353
>gi|301786749|ref|XP_002928787.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Ailuropoda melanoleuca]
gi|281352153|gb|EFB27737.1| hypothetical protein PANDA_018837 [Ailuropoda melanoleuca]
Length = 565
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 176/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ASSAAPCQPRRGGALLEEPDLSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|345797847|ref|XP_536136.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Canis lupus
familiaris]
Length = 565
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 176/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ASSPAPAQPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|194036892|ref|XP_001927817.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Sus
scrofa]
Length = 565
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 177/392 (45%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPIYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|350583234|ref|XP_003481465.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Sus scrofa]
Length = 610
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 177/392 (45%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 255 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 314
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 315 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 373
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 374 ASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 433
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 434 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 462
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 463 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 520
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 521 SSVGVDFPLQRLSLGDFASDKA----GSPIYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 573
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 574 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 601
>gi|348561662|ref|XP_003466631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Cavia
porcellus]
Length = 566
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 177/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 211 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 270
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 271 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 330
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 331 NGPVPS--LPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 388
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 389 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 418
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C + F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 419 ---DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIK 475
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 KSSVGVDFPLQRLSLGDFASDKA----GSPIYQLYALCNHSG-SVHYGHYTALCRCQ-TG 529
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 530 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 557
>gi|24643795|ref|NP_728456.1| CG14619, isoform B [Drosophila melanogaster]
gi|22832694|gb|AAN09567.1| CG14619, isoform B [Drosophila melanogaster]
Length = 337
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 172/376 (45%), Gaps = 54/376 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
L G+ N GNTC++NSV+QCLS+T L + +K Q Q++ ++ MW
Sbjct: 10 SLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQ-QILHEFAKLIQEMW 68
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
++ + + A + + + QQDAQEFL + L +L+ + G T N
Sbjct: 69 TANVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGVKGETL-N 124
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ +A WE + E S+ D+FVGQL+
Sbjct: 125 IDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK------------------------- 159
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETLH 242
S+++C+ C TS ++ FW+LS+P+P L CL+ F E L
Sbjct: 160 -------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLD 206
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYY 298
TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 207 GDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSELN 264
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS DA +
Sbjct: 265 MGSYGANSNSNVHYSLYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVS--DALS- 320
Query: 359 ESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 321 ENHLVSSSAYILFYER 336
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 181/389 (46%), Gaps = 71/389 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNT-PAFRNVL-------LNEDIPIHPDSKSQGQLVDAL 55
GL G++N GNTC++NS +QCL++ P R L LN D P+ ++G+L +A
Sbjct: 1 GLAGLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPL----GNKGELAEAF 56
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPD 114
+ MK++W G ++ K AL + +F G QQD+QE L +LL L+E+ +V
Sbjct: 57 GSLMKLLWQGGVGSVSPKGFKAALARFAPQFGGYSQQDSQELLAFLLDGLHEDLNRVRQK 116
Query: 115 QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
Y + +V + A W+ ++ SV D F G
Sbjct: 117 PYVEEADAEGRPDKVVAAEA---WDNYRKRNDSVVVDHFQG------------------- 154
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECL- 232
LY +S++ C C +S ++ F LSLP+P TLY L
Sbjct: 155 ---------------LY----KSTLVCPQCSFSSVKFDPFMYLSLPLPSSKTRTLYITLI 195
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPI 286
F E L C CK+ K ++ LP +L++ KRFS + K+ +P+
Sbjct: 196 YAFLQPEQLDAADSWYCGRCKEHVRAEKKLDLWSLPELLVVHLKRFSYSRHSRDKLDAPV 255
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
FP LD+ ++ R + YDL AVSNH G GHYTAYCR + G W+ +D
Sbjct: 256 HFPLSALDLSSFLL---REQDVAPVYDLYAVSNHFGGLG-GGHYTAYCRMDDDG-WHCFD 310
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D+ VSP D +V+S AY+L Y+RR
Sbjct: 311 DSHVSPADESSVQSK----AAYLLFYRRR 335
>gi|291397578|ref|XP_002715234.1| PREDICTED: ubiquitin-specific protease 21 [Oryctolagus cuniculus]
Length = 565
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 176/393 (44%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPAPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLH----NTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
+C + F E L C C++++ K +QR P +L+L RFS++ +
Sbjct: 418 ---DCFSLFTKEEELELENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|119573030|gb|EAW52645.1| ubiquitin specific peptidase 21, isoform CRA_d [Homo sapiens]
Length = 565
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 176/393 (44%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
+C N F E L + C C++++ K +QR P +L L RFS++ +
Sbjct: 418 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|109017739|ref|XP_001117768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Macaca mulatta]
gi|410034003|ref|XP_524939.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 9 [Pan
troglodytes]
gi|426332415|ref|XP_004027801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Gorilla
gorilla gorilla]
Length = 565
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 176/393 (44%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
+C N F E L + C C++++ K +QR P +L L RFS++ +
Sbjct: 418 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|296489875|tpg|DAA31988.1| TPA: ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|440893879|gb|ELR46495.1| Ubiquitin carboxyl-terminal hydrolase 21 [Bos grunniens mutus]
Length = 565
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 175/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C N F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|198470304|ref|XP_001355290.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
gi|198145386|gb|EAL32347.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
Length = 872
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 176/384 (45%), Gaps = 66/384 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS---QGQLVDALVNF 58
S GL G+ N GNTC++NSV+QCLS+T L H S+S + QL+ L F
Sbjct: 543 SEGLCGLRNIGNTCFMNSVIQCLSHTTELTRFLR-----THHGSRSSATKDQLI--LFEF 595
Query: 59 MKM---MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
K+ MW+S + + A + + + QQDAQEFL + L +L+ +
Sbjct: 596 AKLIQEMWTSSVHTVTPMDLKRAFSAKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSG 652
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
G T N + +A WE + E S+ D+FVGQL+
Sbjct: 653 IKGETL-NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------- 694
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNK 234
S+++C+ C TS ++ FW+LS+P+P L CL+
Sbjct: 695 ---------------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDL 733
Query: 235 FFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPR 290
F E L TC CK + K + IQR P L++ KRFS K+++ ++FP
Sbjct: 734 FIREEILDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPT 793
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
D+ +++ G S Y L A+SNH+G TA GHYTA C+ + +W+ ++D +V
Sbjct: 794 ADRDLN--MASYGANSNSNVHYSLYAISNHMGSTA-GGHYTALCKHPVSRKWHEFNDNIV 850
Query: 351 SPVDAQTVESAEAEHGAYILVYQR 374
S E+ AYIL Y+R
Sbjct: 851 SD---SVSENFLVSSSAYILFYER 871
>gi|395729514|ref|XP_002809941.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pongo abelii]
Length = 594
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 176/393 (44%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 239 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 298
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 299 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 358
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 359 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 416
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 417 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 446
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L L RFS++ +
Sbjct: 447 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIK 503
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 504 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 557
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 558 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 585
>gi|449548362|gb|EMD39329.1| hypothetical protein CERSUDRAFT_64183 [Ceriporiopsis subvermispora B]
Length = 1166
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 178/404 (44%), Gaps = 79/404 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVL--------LNEDIPIHPDSKSQGQLVDAL 55
G +G+ N GNTCY+NS +QCLS T F +N P+ ++G L A
Sbjct: 806 GTSGLKNLGNTCYMNSTIQCLSATVPFTRFFTEGRWKNAVNMVNPL----GTKGALAHAF 861
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
+ ++ MW N L ++ +Y +F G++Q D+QEFL LL L+E+
Sbjct: 862 ASILREMWQGENQCLTPVTFRRSVCTYAPQFSGSEQHDSQEFLTSLLDGLHEDLN----- 916
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
R LH T E + Q+ S +R +Y +
Sbjct: 917 -----------------RVLHKPHTEPTPEQEAELERLPVQIAS-------EREWQIYRM 952
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG----TLYEC 231
+ SL V ++ Q R+ + C C +TST Y F L+LP+P +L +C
Sbjct: 953 RND-SLVV-----DFFQGQFRNRLECLTCHKTSTTYNAFMYLTLPIPSTRSGSKVSLQQC 1006
Query: 232 LNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSP 285
L+ F E + + C +CK K + RLPPVL++ KRFS+ FT KV +
Sbjct: 1007 LDAFVKEEVMEKSDAWNCPHCKTLRKATKRLSLSRLPPVLLIHLKRFSAKGPFTDKVETV 1066
Query: 286 IKFPREGLDMEYYI----------SASGRRVESR-----YTYDLCAVSNHIGKTALYGHY 330
+ FP GLD+ Y+ S R + R Y YDL AV+NH G T GHY
Sbjct: 1067 VDFPLRGLDLTNYMPPPLPPGVGGGPSISRDDPRCQMPPYRYDLYAVTNHFG-TLSGGHY 1125
Query: 331 TAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
TA+ G W DD+ VS DA+ V AYIL Y+R
Sbjct: 1126 TAFI--SSRGGWLYCDDSRVSQADAKDV----VGRPAYILFYKR 1163
>gi|397481302|ref|XP_003811887.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pan paniscus]
Length = 594
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 176/393 (44%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 239 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 298
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 299 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 358
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 359 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 416
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 417 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 446
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L L RFS++ +
Sbjct: 447 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIK 503
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 504 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 557
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 558 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 585
>gi|195130331|ref|XP_002009605.1| GI15450 [Drosophila mojavensis]
gi|193908055|gb|EDW06922.1| GI15450 [Drosophila mojavensis]
Length = 1158
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 169/376 (44%), Gaps = 53/376 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NSV+QCLS+T L + Q++ ++ MW
Sbjct: 830 GLCGLRNIGNTCFMNSVIQCLSHTTELTRFLRAHHTNTRTATSKDQQILYEFAKLIQEMW 889
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+S + + A + + + QQDAQEFL + L +L+ + G T N
Sbjct: 890 TSNVHSVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNTGVKGETL-N 945
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ +A WE + E S+ D+FVGQL+
Sbjct: 946 IDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLK------------------------- 980
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETLH 242
S+++C+ C TS ++ FW+LS+P+P L CL+ F E L
Sbjct: 981 -------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLD 1027
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYY 298
TC CK + K + IQR P L++ KRFS K+++ ++FP D E
Sbjct: 1028 GDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPT--ADRELN 1085
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+++ G S Y L A+SNH+G TA GHY A C+ + +W+ ++D VS DA
Sbjct: 1086 MASYGANANSNVHYSLYAISNHMGSTA-GGHYVAICKHPVSRKWHEFNDNSVS--DA-IP 1141
Query: 359 ESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 1142 ENCLVSSSAYILFYER 1157
>gi|387019607|gb|AFJ51921.1| Ubiquitin carboxyl-terminal hydrolase 21 [Crotalus adamanteus]
Length = 629
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 178/386 (46%), Gaps = 60/386 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDS--KSQGQLVDALVNFMKM 61
G G+ N GNTC++N+VLQCLS+T R+ L + ++Q +L +AL + +
Sbjct: 279 GHIGLRNLGNTCFMNAVLQCLSSTKPLRDYCLRREFRQEQPCTLRTQQELTEALADVIAT 338
Query: 62 MWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQY 116
+W + N + Y F G QQDAQEFL +L+ L N + + P
Sbjct: 339 LWHPDTSEAANPSRFKSVFQKYVPSFTGYSQQDAQEFLKFLMDRLHVEINRKGRKSPCIL 398
Query: 117 NGSTYSNT---SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
+ + + + S +A W+++ E S D+FVGQL+S ++C C ST +
Sbjct: 399 SDAKWPSVLEDSETLSDDEQANQMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTF 458
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
E+F +LSLP+P G G +L +C N
Sbjct: 459 EVFCDLSLPIPKKG---------------------------------FAGGKVSLLDCFN 485
Query: 234 KFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIK 287
F E L + C C++++ K IQR P +L+L RFS+ +K + +
Sbjct: 486 LFTKEEELDSENAPVCDKCRQRTRSTKKLTIQRFPRILVLHLNRFSTTRYSIKKCSVYVD 545
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP + L+++ + S Y+L A+ NH G + YGHYTA+C+ + W +++D
Sbjct: 546 FPLQQLNLKEFASEKA----GTPVYNLYALCNHSG-SVHYGHYTAFCKDQSG--WRVFND 598
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQ 373
+ VSP+ + S+E Y+L Y+
Sbjct: 599 SRVSPISENQIPSSE----GYVLFYE 620
>gi|321462098|gb|EFX73124.1| hypothetical protein DAPPUDRAFT_307972 [Daphnia pulex]
Length = 338
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 177/373 (47%), Gaps = 59/373 (15%)
Query: 17 INSVLQCLSNTPAFRNVLLNEDIPIHPDSKS---QGQLVDALVNFMKMMWSS-------- 65
+NSVLQCLSNT + +++ + H ++ + G L+ A + +W
Sbjct: 1 MNSVLQCLSNTRSVLEYVISNEYANHINTSTSSMNGALIKAFAIVLAELWKKEDDDDDSY 60
Query: 66 GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTS 125
+ +N A+ ++ + +F G QQDAQEFL YLL L+E+ + + + + S
Sbjct: 61 SSSAVNPTALKSQIQKFAPRFMGYNQQDAQEFLRYLLEGLHEDVNRIAVKPRPLEH-DIS 119
Query: 126 SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
S +A W+++ + S D+FVGQL+S+++C+ C S ++ FW+LSLP+PP
Sbjct: 120 DDLSDSEKAAESWKRYVRRDDSKIVDLFVGQLKSTLQCTVCGHCSVTFDPFWDLSLPIPP 179
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
+S+V+ L CL+ F E L
Sbjct: 180 SS--------KSNVK---------------------------LQHCLDLFGKEEILDGDE 204
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT-QKVTSPIKFPREGLDMEYYIS 300
TC C+ + K + I + P +L+L KRFS +K+ + + FP LD+ Y S
Sbjct: 205 KPTCSKCQTRRKCTKKFTIHKFPQILVLHLKRFSPGERFRKLDASVDFPLTDLDLSAYTS 264
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ S +Y L V NH G +A GHYTA CR + W+ Y+D+ +S + AQ V S
Sbjct: 265 PGIK--PSPCSYQLYGVINHSG-SAYSGHYTASCRHPFSANWHEYNDSRISNLTAQRVVS 321
Query: 361 AEAEHGAYILVYQ 373
+E AY+L Y+
Sbjct: 322 SE----AYLLFYE 330
>gi|195169026|ref|XP_002025329.1| GL13296 [Drosophila persimilis]
gi|194108785|gb|EDW30828.1| GL13296 [Drosophila persimilis]
Length = 820
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 171/378 (45%), Gaps = 54/378 (14%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L +K Q L + ++
Sbjct: 491 SEGLCGLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSSATKDQLILFE-FAKLIQE 549
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW+S + + A + + + QQDAQEFL + L +L+ + G T
Sbjct: 550 MWTSSVHTVTPMDLKRAFSAKHRMYSDYNQQDAQEFLRFFLDSLHS---ALNSGIKGETL 606
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A WE + E S+ D+FVGQL+
Sbjct: 607 -NIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLK----------------------- 642
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGET 240
S+++C+ C TS ++ FW+LS+P+P L CL+ F E
Sbjct: 643 ---------------STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEI 687
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDME 296
L TC CK + K + IQR P L++ KRFS K+++ ++FP D+
Sbjct: 688 LDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTADRDLN 747
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+++ G S Y L A+SNH+G TA GHYTA C+ + +W+ ++D +VS
Sbjct: 748 --MASYGANSNSNVHYSLYAISNHMGSTA-GGHYTALCKHPVSRKWHEFNDNIVSD---S 801
Query: 357 TVESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 802 VSENFLVSSSAYILFYER 819
>gi|149759807|ref|XP_001503883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Equus caballus]
gi|149759809|ref|XP_001503880.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Equus caballus]
Length = 565
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 176/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S + + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NSP-APSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSIGVDFPLQRLSLGDFASDKA----GSPIYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|354489521|ref|XP_003506910.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Cricetulus griseus]
Length = 565
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 177/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
+G S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPS--PPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C + F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 418 ---DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|195439036|ref|XP_002067437.1| GK16418 [Drosophila willistoni]
gi|194163522|gb|EDW78423.1| GK16418 [Drosophila willistoni]
Length = 1396
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 171/377 (45%), Gaps = 49/377 (12%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTC++NSV+QCLS+T L + Q++ ++
Sbjct: 1064 SDGLCGLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSSSATKDQQILHEFAKLIQE 1123
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW++ + + A + + + QQDAQEFL + L +L+ + G
Sbjct: 1124 MWTTNVHTVTPMELKRAFSTKHRMYSDFNQQDAQEFLRFFLDSLHS---ALNTGVKGGEA 1180
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + +A W+ + E S+ D+FVGQL+S+++C+ C TS ++ FW+LS+
Sbjct: 1181 LNIDDNLSDNKKADLTWDWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSV 1240
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
P+PP SS RC L CL+ F E L
Sbjct: 1241 PLPP-----------SSSRCK-------------------------LDACLDLFIREEVL 1264
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
TC CK + K + IQR P L++ KRFS K+ + ++FP D E
Sbjct: 1265 DGDEMPTCSKCKTRRKCKKSFTIQRFPKYLVIHLKRFSETRWSKLLNVVEFPTS--DREL 1322
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
+ + G S Y L A+SNH+G TA GHY A C+ + +W+ ++D +VS
Sbjct: 1323 NMGSYGSNSNSSVHYSLYAISNHMGSTA-GGHYVALCKHPDSRKWHEFNDNIVSDT---L 1378
Query: 358 VESAEAEHGAYILVYQR 374
E+ AYIL Y+R
Sbjct: 1379 SENFLVSASAYILFYER 1395
>gi|403294063|ref|XP_003938024.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Saimiri
boliviensis boliviensis]
Length = 596
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 175/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 241 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 300
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 301 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 359
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S + + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 360 ASGPAPSPPRRGGALLEEPDLSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 419
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 420 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 448
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C N F E L + C C++++ K +QR P +L L RFS++ +K
Sbjct: 449 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIKK 506
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 507 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 559
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 560 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 587
>gi|114052120|ref|NP_001039841.1| ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|122136171|sp|Q2KJ72.1|UBP21_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|86821766|gb|AAI05489.1| Ubiquitin specific peptidase 21 [Bos taurus]
Length = 565
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 175/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N++LQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C N F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|325187625|emb|CCA22161.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
gi|325189754|emb|CCA24235.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 451
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 184/403 (45%), Gaps = 46/403 (11%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+NS +QCLS+ D +S +GQ+V + + M+ +W
Sbjct: 57 GLVGLENIGNTCYLNSCVQCLSHLQVLMRYFDTNDR--MEESAGRGQVVVSFHSLMQKLW 114
Query: 64 SSGNLV--LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV--PDQYNG- 118
S+ + K ++ L+ +F G++Q DAQEFL +LL +L++E V P +Y
Sbjct: 115 SNAKSIEPYELKRVISRLQP---QFQGHEQHDAQEFLRFLLDSLHDELNRVQDPPKYREI 171
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T +N + ++V YW S FSD F GQL S V+C +C S ++ FW+
Sbjct: 172 KTNTNANDREVSD----GYWGYHLERNQSFFSDTFCGQLGSEVKCQSCLHRSLCFDTFWD 227
Query: 179 LSLPVPPGGGTLYEC--QLRS-----------SVRCSNCKRTSTVYEIFWELSLPVPPGG 225
+SL P + LR+ S+ N ++ + + V P
Sbjct: 228 ISLSFPLMRKIKHPILSPLRAVFQSRVNVPNLSMESRNGSKSIPSSPKAFGFTRTVSPTR 287
Query: 226 G-------TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF 274
+L ECL F E L + C C+K K RLP +L++ KRF
Sbjct: 288 NSLEERSISLIECLELFTASELLEESNGFYCSKCRKNGSTWKTIVFYRLPEILVIHLKRF 347
Query: 275 S--SNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
+ +K I+FP E LD+E + ASG ++ YDL V H G T GHYTA
Sbjct: 348 EVKAAHCKKNMRNIEFPVESLDLERFC-ASGAVLDGGTKYDLMGVVLHDG-TLNDGHYTA 405
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
C WY ++D VS + + SA YIL YQRR
Sbjct: 406 ECLHGVKKAWYSFNDACVSSIAKPSNNSA----SPYILFYQRR 444
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 175/402 (43%), Gaps = 73/402 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
G +G+ N GNTCY+N+ +QCLS T F + + ++G + A + +
Sbjct: 1046 GQSGLRNLGNTCYMNATMQCLSATVPFARFFTEGRWRAAVNMMNKMGTKGAIAQAFAHIL 1105
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+W + + ++ SY +F G++Q D+QEFL +LL AL+E+ V + S
Sbjct: 1106 HEIWQGEMSFFSPISFRRSICSYASQFAGSEQHDSQEFLSWLLDALHEDLNRV---ISKS 1162
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
TY T ++ EK AS R + S V + F
Sbjct: 1163 TYEVTPEREA-------ELEKLPQQIAS----------EQEWRIYRMRNDSIVVDFF--- 1202
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP---GGGTLYECLNKFF 236
+ Q R+ + C C +TST Y F LSLPVP G TL CL+ F
Sbjct: 1203 ------------QGQFRNRMECMTCHKTSTTYNSFMNLSLPVPTSKHGKITLQNCLDAFV 1250
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
E + + C CK K + RLPPVL++ FKRFS FT K+ + FP
Sbjct: 1251 KEEVMEKSDAWNCPNCKVLRKATKQLSLSRLPPVLLIQFKRFSFKGPFTDKIDKHVDFPL 1310
Query: 291 EGLDMEYYISA------------------SGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
+GL++ Y+ R+ Y YDL AV+NH G + GHYTA
Sbjct: 1311 KGLELTNYMPPPLPPGVDRGQAAVQYGNDDPRQQTPPYKYDLYAVTNHFGSLS-SGHYTA 1369
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ G+W DD+ ++P DA+ V AY+L Y+R
Sbjct: 1370 FINSR--GQWLYCDDSRITPSDAKEVVGKP----AYVLYYKR 1405
>gi|189083712|ref|NP_001121110.1| ubiquitin carboxyl-terminal hydrolase 21 [Rattus norvegicus]
gi|226751948|sp|B2GUX4.1|UBP21_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|183986536|gb|AAI66443.1| Usp21 protein [Rattus norvegicus]
Length = 565
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 180/393 (45%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
+G S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPS--PPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
+C + F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 418 ---DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S +V S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASD---KVGS-PVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|328793899|ref|XP_394836.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Apis
mellifera]
Length = 1001
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 184/386 (47%), Gaps = 71/386 (18%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
PG+ G+ N GN+CY+NS++QCLSNT F + L +D+ I+ D+ +QGQ+V+ +
Sbjct: 663 PGITGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNINNDNNTQGQVVEEVAQV 722
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV---VPDQ 115
+K +W ++ + +A+ Y +F+ +QQD+ EFL +LL ++ + K VP
Sbjct: 723 IKALWRGQYKSISPHDLKIAVGQYKLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVP-- 780
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
V A W+K ++ S+ SD+F GQLRS++ CS CK++ST YE
Sbjct: 781 -------------VEMTIAEKAWDKAMGSQRSIISDLFFGQLRSTITCSFCKQSSTTYET 827
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F L++ L S RC TL +C+ KF
Sbjct: 828 FNSLTM------------SLLHSNRC-------------------------TLNDCILKF 850
Query: 236 FNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREG 292
+G+ + C C+ + K ++ +L P++++ RF S + +K + + FP
Sbjct: 851 VSGQKVIGWKCPKCQTAREATKKFDFVKLAPIIVIHLNRFAESGGWLEKRNTAVDFPLTD 910
Query: 293 LDMEYYISASGRRV------ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++ Y+ Y+Y L A+SNH G T GHYTA+C+ +WY YD
Sbjct: 911 FNLKPYLVTDNNSTTISNIRSYSYSYSLYAMSNHYG-TMEGGHYTAFCKNAAQNKWYKYD 969
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVY 372
D V+ V V S AY+L Y
Sbjct: 970 DQTVTEVSVNQVRSQNT--SAYLLFY 993
>gi|326675880|ref|XP_693811.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Danio rerio]
Length = 1067
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 173/381 (45%), Gaps = 59/381 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL NT A F +DI +G++ +
Sbjct: 732 PLLTGLRNLGNTCYMNSILQCLCNTVAMADYFNRNYYQDDINRANILGHKGEVAEEFSVV 791
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W +++ + +F + QD+QE LL+L+ L+E+ D+ G
Sbjct: 792 MKALWLGQYKMISPLDFKGTICKINSRFSSYEHQDSQELLLFLMDGLHEDLNKA-DKRRG 850
Query: 119 STYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y + + A W K + S+ +F GQ +S+V+C +C+ S +E F
Sbjct: 851 --YKEEEIEHLDDVSAADLAWSKHKQLNESIIVALFQGQFKSTVQCMSCQHKSRTFETFM 908
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
L+L ++ +S +CS L +CL F
Sbjct: 909 YLTL------------EMTASSKCS-------------------------LQDCLKLFHK 931
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPRE 291
E L + C++CK D +K +I +LPP+L++ KRF + +K+ + + FP +
Sbjct: 932 EERLTDGNRFYCRHCKTHRDAIKRMQIWKLPPILLVHLKRFKYEGRWREKLQTLVDFPLD 991
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ Y+ ++ Y+L AVSNH G GHYTAYC+ RW+ +DD VS
Sbjct: 992 NLDLSQYVIGPKNNLKK---YNLYAVSNHYGGMD-GGHYTAYCKNPMKQRWFKFDDHEVS 1047
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ + TV S AYI Y
Sbjct: 1048 EISSSTVRSP----AAYIFFY 1064
>gi|148707161|gb|EDL39108.1| ubiquitin specific peptidase 21, isoform CRA_b [Mus musculus]
Length = 566
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 172/392 (43%), Gaps = 66/392 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
+ + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 389
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 390 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 418
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L L RFS++ +K
Sbjct: 419 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSTSRGSIKK 476
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 477 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 529
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 530 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 557
>gi|426216987|ref|XP_004002735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Ovis
aries]
Length = 565
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 175/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 -SSPAPPPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C N F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|426216989|ref|XP_004002736.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2 [Ovis
aries]
Length = 592
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 175/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 237 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 296
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 297 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 356
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 357 -SSPAPPPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 415
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 416 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 444
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C N F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 445 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 502
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 503 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 555
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 556 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 583
>gi|432110442|gb|ELK34059.1| Ubiquitin carboxyl-terminal hydrolase 2 [Myotis davidii]
Length = 599
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 181/385 (47%), Gaps = 59/385 (15%)
Query: 2 SPGLNGIANAGNTCYINSV----LQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDAL 55
SPG + + + T S+ L+C NT R+ L + S + L++
Sbjct: 253 SPGQDTVTSGSVTASAASLGRCCLRCSGNTRELRDYCLQRLYLRDLGHSSHAHTALMEEF 312
Query: 56 VNFMKMMWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD 114
++ +W+S N V++ ++ Y +F G QQDAQEFL +LL L+ E V
Sbjct: 313 AKLIQAIWTSPLNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTV 372
Query: 115 QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+ ST N + W K+ E S D+FVGQLRSS+ C++C STV++
Sbjct: 373 RPK-STPENLD-HLPDDEKGRQMWRKYLEREDSRIGDLFVGQLRSSLTCTDCGHCSTVFD 430
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNK 234
FW+LSLP+ G + E+ TL +C+
Sbjct: 431 PFWDLSLPIAKRG--------------------------YPEV---------TLMDCMRL 455
Query: 235 FFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKF 288
F + L TC C+ + +K + IQR P VL+L KRFS + T K+T+ + F
Sbjct: 456 FTKEDVLDGDEKPTCCRCRARRRCLKKFSIQRFPKVLVLHLKRFSESRVRTSKLTTFVSF 515
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P LD+ + S + Y+L AVSNH G T + GHYTAYCR TG W+ ++D+
Sbjct: 516 PLRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPATGEWHTFNDS 570
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQ 373
V+P+ + V +++ AY+L Y+
Sbjct: 571 SVTPMSSSQVRTSD----AYLLFYE 591
>gi|344287000|ref|XP_003415244.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Loxodonta
africana]
Length = 565
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 176/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
+ + + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ANNPAPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKRGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLDLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPIYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|393214464|gb|EJC99956.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 1206
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 175/420 (41%), Gaps = 94/420 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GNTCY+NS +QCLS T F ++ + ++G L A + + +
Sbjct: 826 GLKNLGNTCYMNSTIQCLSATVPFARFFIDGRWKSAVNFLNPLGTKGHLTAAFASILHDL 885
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
W + + A ++ Y ++F G++Q D+QEFL +LL L+E+ + N
Sbjct: 886 WHQESPTITPLAFRKSVCMYGQQFAGSEQHDSQEFLNFLLDGLHEDLNRI---LNKEPVL 942
Query: 123 NTSSKQV------GSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
T ++ + W ++ + S+ D F GQ R+ + C C++TST Y F
Sbjct: 943 RTPEREAELELLPQQIASQQEWNLYRMRDDSIVVDFFQGQFRNRMECLTCRKTSTTYNSF 1002
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
L+LP+P GG G TL +CL+ F
Sbjct: 1003 MYLTLPIPMGGRGFG--------------------------------GKATLQQCLDAFV 1030
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS--NFTQKVTSPIKFPR 290
E + C CK K I RLPPVL++ KRF++ +FT K+ + + FP
Sbjct: 1031 QEEVMEKADAWQCPNCKTLRKATKKLSISRLPPVLLIHLKRFTTKGHFTDKLETFVDFPL 1090
Query: 291 EGLDMEYYI---------------SASG---------------------RRVESRYTYDL 314
GLD+ Y+ SA+G R Y YDL
Sbjct: 1091 RGLDLTNYMPAPLPPNVDRSKLYSSATGMLNGSAQVAGTTQTPISLDDPRSQVPPYKYDL 1150
Query: 315 CAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
AV+NH G T GHYTA+ G W DD+ +S DA+ V AY+L Y+R
Sbjct: 1151 YAVTNHFG-TLSSGHYTAFVNSRGN--WLYCDDSRISTADAKEV----VGKPAYVLYYKR 1203
>gi|380023879|ref|XP_003695737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Apis
florea]
Length = 1001
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 185/386 (47%), Gaps = 71/386 (18%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
PG+ G+ N GN+CY+NS++QCLSNT F + L +D+ I+ D+ +QGQ+V+ +
Sbjct: 663 PGITGLKNLGNSCYMNSIIQCLSNTTHLAKYFMDNLYADDLNINNDNNTQGQVVEEVAQV 722
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV---VPDQ 115
+K +W ++ + +A+ Y +F+ +QQD+ EFL +LL ++ + K VP
Sbjct: 723 IKALWRGQYKSISPHDLKIAVGQYKLQFESYEQQDSHEFLTFLLDWMHNDLKKNCKVP-- 780
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ A W+K ++ S+ SD+F GQLRS++ CS CK++ST YE
Sbjct: 781 -------------LEMTIAEKAWDKAMGSQRSIISDLFFGQLRSTITCSFCKQSSTTYET 827
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F L++ L S RC TL +C+ KF
Sbjct: 828 FNSLTM------------SLLHSNRC-------------------------TLNDCILKF 850
Query: 236 FNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREG 292
+G+ + C C+ + K ++ +L P++++ RF S + +K + + FP
Sbjct: 851 VSGQKVVGWKCPKCQTPREATKKFDFVKLAPIIVIHLNRFAESGGWLEKRNTAVDFPLTD 910
Query: 293 LDMEYYISASGRRV------ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++ Y+ A Y+Y L A+SNH G T GHYTA+C+ +WY YD
Sbjct: 911 FNLKPYLVADNNSTAISNIRSYSYSYSLYAMSNHYG-TMEGGHYTAFCKNAVQNKWYKYD 969
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVY 372
D V+ V V S AY+L Y
Sbjct: 970 DQTVTEVSVNQVRSQNT--SAYLLFY 993
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 179/394 (45%), Gaps = 60/394 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHP------------DSKSQGQ- 50
G G+ N GNTC++N++LQ LSN F +++P ++SQG
Sbjct: 158 GATGLRNLGNTCFMNAILQSLSNIEQFSCYF--KELPAVALRSGKTAGRRMYHTRSQGDN 215
Query: 51 ---LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNE 107
LV+ + +W + ++ A+ F G QQQDA EF+ YLL L+
Sbjct: 216 SVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLDHLHR 275
Query: 108 EAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
E QY+ + S+ S Q G + + ASV + IF G L++ V C C
Sbjct: 276 EL-----QYSRNGASHPLSPQDGVRLSSTDGKCCTNGTASVVTSIFGGILQNEVNCLICG 330
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
S ++ F +LSL +P Q R KR PVP T
Sbjct: 331 TESRKFDPFLDLSLDIPS--------QFRQ-------KRNKD--------QEPVPTC--T 365
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQK 281
L +CL+ F + E L +T C CKK+ K + IQ+LP VL L KRF ++ K
Sbjct: 366 LRDCLHSFTDLEELDDTELYYCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNK 425
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
V + ++FP +GLDM Y+ + + YDL AV H G GHYTAY E GR
Sbjct: 426 VDTYVEFPLKGLDMRGYLLEPEKSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSHE--GR 483
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
WY ++D+ V+ + TV A+ AYIL Y R
Sbjct: 484 WYHFNDSTVTLTNEDTVRKAK----AYILFYVER 513
>gi|332253964|ref|XP_003276102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Nomascus
leucogenys]
Length = 565
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 175/393 (44%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFWQEVPGGGRAQELTEAFADVTGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPVPS--PPRRGGALLEEPEFSDDDRANLMWKRYLEREDSKTVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C N F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 418 ---DCFNLFPKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + P + L + + S Y L A+ NH G +A YGHYTA CR + TG
Sbjct: 475 KSSVGVDLPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SAHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+ YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVPFYQ 556
>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
kowalevskii]
Length = 1150
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 175/381 (45%), Gaps = 62/381 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNFM 59
L G+ N GNTC++NS++Q L+N+ + H + +++ G++ + +
Sbjct: 807 ALTGLKNLGNTCFMNSIIQSLANSTPLATYFIEGSYKYHINRENKLGRGGKVAEEFAVVI 866
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+WS ++ + L + + +F G +QQD+QEFLL+LL L+E+ V +
Sbjct: 867 NAIWSGHYRSISPRDFKLTVSKFVPQFAGYEQQDSQEFLLFLLDGLHEDLNRVKHRKYIE 926
Query: 120 TYSNT--SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
NT + Q W + S+ ++F GQ +S+++C C++ S Y+ F
Sbjct: 927 EKDNTHLTDDQAAQL----AWNNHKRLNESIMVELFQGQFKSTLQCLFCQKKSVTYDAFM 982
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
LSLP L S+ RCS LY+C+ F
Sbjct: 983 YLSLP------------LLSNNRCS-------------------------LYDCVKNFTK 1005
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPRE 291
E + C CK + K EI +LP +L++ KRFS + K+ + + FP
Sbjct: 1006 LEKVGGADKWFCPKCKVHREANKRIEIWKLPHILLIHLKRFSYEGVWRHKLQTDVDFPIN 1065
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LDM ++ +R +Y+L AVSNH G T GHYTA+C+ +WY +DDT V
Sbjct: 1066 NLDMSSHVIGPKKRS----SYNLYAVSNHYG-TMDGGHYTAFCKNAIRQKWYKFDDTEVY 1120
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ + V+S+ AYIL Y
Sbjct: 1121 EMPTRNVKSS----AAYILFY 1137
>gi|11414862|dbj|BAB18534.1| deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 161/356 (45%), Gaps = 55/356 (15%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +DI +G++ +
Sbjct: 736 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 795
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G+ QQD+QE LL L+ L+E+ ++
Sbjct: 796 MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLSLMDGLHEDLNKADNRKRH 855
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+N + RA +K + S+ +F GQ ++
Sbjct: 856 KEENNEHLDEPAGGRA--RLQKHKQLNESIIRLLFQGQFKA------------------- 894
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
+V+C C+R S +E F LSLP+ TL +CL F
Sbjct: 895 -------------------TVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 935
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
E L + C +C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E
Sbjct: 936 EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 996 NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1047
>gi|390476931|ref|XP_002760234.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Callithrix jacchus]
Length = 565
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 174/392 (44%), Gaps = 67/392 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S + + + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ASGPAPSPPCRGGALLEEPDLSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
+C N F E L + C C++++ K +QR P +L L RFS++ +K
Sbjct: 418 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|50556092|ref|XP_505454.1| YALI0F15367p [Yarrowia lipolytica]
gi|49651324|emb|CAG78263.1| YALI0F15367p [Yarrowia lipolytica CLIB122]
Length = 992
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 179/396 (45%), Gaps = 68/396 (17%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNFMKMM 62
G+ N GNTCYIN ++QCL+ T +++N+ + KS+ G L+ + ++ +
Sbjct: 635 GLKNLGNTCYINCIIQCLA-TSQLTKIIVNQAYKHRVNMKSKLGYKGALIAKYADLVQAL 693
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD-QYNGS-- 119
++ L + + +F G +Q D QEFL ++L L+EE V D QY
Sbjct: 694 VANAYPYLVPTSFKGIIAHVNSQFSGMEQHDCQEFLTFILDGLHEELNSVGDGQYKPREL 753
Query: 120 TYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
T S ++ S R + WE++ + +S D F GQ +S ++C+ CK TST Y F
Sbjct: 754 TESEEKRREEMSVRIVSSLEWERYLKSASSFIVDEFQGQYQSKLQCTVCKMTSTTYTAFS 813
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
L+LP+P G +LP TLY+C N+F
Sbjct: 814 SLTLPIPKYAGA----------------------------TLP------TLYDCFNQFTQ 839
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPRE 291
E L C CKK +K +I RLP LI+ KRF S + K+ + + +P E
Sbjct: 840 PELLEGENMWQCPTCKKPRPTIKSMKISRLPETLIIHLKRFDHSRGYGDKLNTFVTYPLE 899
Query: 292 GLDMEYYISASGRRVE------------SRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
+D+ Y E + + Y L V+NH G T GHYT++C+R
Sbjct: 900 -MDLTRYWPPPTSEDEPFLKKLLPRGQTAPFRYSLFGVANHYG-TLRGGHYTSFCKRGKL 957
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
G W +DDTV V+ E A AY+L YQRR
Sbjct: 958 G-WCYFDDTV---VNRNVNERAVVNKNAYVLFYQRR 989
>gi|242211549|ref|XP_002471612.1| predicted protein [Postia placenta Mad-698-R]
gi|220729288|gb|EED83165.1| predicted protein [Postia placenta Mad-698-R]
Length = 1026
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 171/402 (42%), Gaps = 76/402 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
G +G+ N GNTCY+NS +QCLS T F + + + ++G L +A N +
Sbjct: 667 GTSGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMMNPMGTKGNLANAFANIL 726
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+ MW L+ +L Y +F G +Q D+QEFL +LL L+E+ V +
Sbjct: 727 RDMWQGEMQCLSPVTFRRSLCMYAPQFGGTEQHDSQEFLNFLLDGLHEDLNRVLQKPQIE 786
Query: 120 TYSNTSS---KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
T + + W+ ++ S+ D F GQ R+ +
Sbjct: 787 TTPEREAELERLPTQIAREQEWQIWRMRNDSLVVDFFQGQFRNRLE-------------- 832
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLYECLN 233
C C +TST Y F L+LP+P G G +LY+CL+
Sbjct: 833 ------------------------CLTCHKTSTTYNTFMYLTLPIPIGRGSKVSLYQCLD 868
Query: 234 KFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS--NFTQKVTSPIK 287
F E + + C +CK K + RLPPVL++ KRFSS +FT K+ + +
Sbjct: 869 AFVKEEVMEKSDAWNCPHCKALRKATKNLSLSRLPPVLLIHLKRFSSKGHFTDKIETFVD 928
Query: 288 FPREGLDMEYYISAS----------GRRVESR-----YTYDLCAVSNHIGKTALYGHYTA 332
+P LD+ Y+ R + R Y YDL V+NH G T GHYTA
Sbjct: 929 YPIRSLDLTNYMPPPLPPGVDMGLQPSRDDPRAQVPPYRYDLYGVTNHFG-TLSSGHYTA 987
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ G W DD+ +S D + V AY+L Y+R
Sbjct: 988 FISSRGG--WLYCDDSRISQADTKDV----VGKPAYMLFYKR 1023
>gi|12847085|dbj|BAB27431.1| unnamed protein product [Mus musculus]
Length = 569
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 173/395 (43%), Gaps = 69/395 (17%)
Query: 4 GLNGIANAGNT---CYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFM 59
G G+ N GNT C++N+VLQCLS+T R+ L D P +L +A + +
Sbjct: 210 GHVGLRNLGNTLPQCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVI 269
Query: 60 KMMWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPD 114
+W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 GALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 329
Query: 115 QYNGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
+ + G+ RA W+++ E S D+FVGQL+S ++C
Sbjct: 330 ILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQ 389
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
C ST +E+F +LSLP+P G + LR
Sbjct: 390 ACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLR---------------------------- 421
Query: 225 GGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--F 278
+C + F E L + C C++++ K +QR P +L+L RFS++
Sbjct: 422 -----DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGS 476
Query: 279 TQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
+K + + FP + L + + S Y L A+ NH G + YGHYTA CR +
Sbjct: 477 IKKSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ- 530
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
TG W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 531 TG-WHVYNDSRVSPVSENQVASSE----GYVLFYQ 560
>gi|351710726|gb|EHB13645.1| Ubiquitin carboxyl-terminal hydrolase 21 [Heterocephalus glaber]
Length = 565
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 175/393 (44%), Gaps = 69/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
N S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NAPVPS--PPRRGGALLEEPDLSDDDRANVMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
+C + F E L + C C++++ K +QR P +L L RFS++ +
Sbjct: 418 ---DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILDLDLNRFSTSRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556
>gi|374073975|pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073977|pdb|2Y5B|E Chain E, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 370
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 178/401 (44%), Gaps = 79/401 (19%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFM 59
+ G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + +
Sbjct: 12 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVI 71
Query: 60 KMMWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-----KVVP 113
+W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 72 GALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 131
Query: 114 DQYNGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRC 163
NG S ++ G+ RA W+++ E S D+FVGQL+
Sbjct: 132 ILANGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLK----- 184
Query: 164 SNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 223
S ++C C ST +E+F +LSLP+P
Sbjct: 185 ---------------------------------SCLKCQACGYRSTTFEVFCDLSLPIPK 211
Query: 224 ---GGG--TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF 274
GG +L +C N F E L + C C++++ K +QR P +L+L RF
Sbjct: 212 KGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 271
Query: 275 SSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
S++ +K + + FP + L + + S Y L A+ NH G + YGHYTA
Sbjct: 272 SASRGSIKKSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTA 326
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
CR + TG W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 327 LCRCQ-TG-WHVYNDSRVSPVSENQVASSE----GYVLFYQ 361
>gi|254575047|pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575048|pdb|3I3T|C Chain C, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575049|pdb|3I3T|E Chain E, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575050|pdb|3I3T|G Chain G, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
Length = 355
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 177/398 (44%), Gaps = 79/398 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 2 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 61
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-----KVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 62 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 121
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+
Sbjct: 122 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLK-------- 171
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP--- 223
S ++C C ST +E+F +LSLP+P
Sbjct: 172 ------------------------------SCLKCQACGYRSTTFEVFCDLSLPIPKKGF 201
Query: 224 GGG--TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN 277
GG +L +C N F E L + C C++++ K +QR P +L+L RFS++
Sbjct: 202 AGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSAS 261
Query: 278 --FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCR 335
+K + + FP + L + + S Y L A+ NH G + YGHYTA CR
Sbjct: 262 RGSIKKSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCR 316
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
+ TG W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 317 CQ-TG-WHVYNDSRVSPVSENQVASSE----GYVLFYQ 348
>gi|431908477|gb|ELK12073.1| Ubiquitin carboxyl-terminal hydrolase 2 [Pteropus alecto]
Length = 570
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 169/381 (44%), Gaps = 95/381 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L + S + L++ ++
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNAHTALMEEFAKLIQT 325
Query: 62 MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
MW SS N V++ ++ Y +F G QQDAQEFL +LL L+ E V +
Sbjct: 326 MWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRV------TV 379
Query: 121 YSNTSSKQVGSF----RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+S + + + W K+ E S D+FVGQL+SS+ C++C STV++ F
Sbjct: 380 RPKSSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 439
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W+LSLP+ G + E+ TL +C+ F
Sbjct: 440 WDLSLPIAKRG--------------------------YPEV---------TLMDCMRLFT 464
Query: 237 NGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREG 292
+ L TC C+ + +K + IQR P +L+L
Sbjct: 465 KEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHHA-------------------- 504
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P
Sbjct: 505 ------------------VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 545
Query: 353 VDAQTVESAEAEHGAYILVYQ 373
+ + +++ AY+L Y+
Sbjct: 546 MSSSQTRTSD----AYLLFYE 562
>gi|340377167|ref|XP_003387101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Amphimedon queenslandica]
Length = 636
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 182/379 (48%), Gaps = 43/379 (11%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-----LVDALVNF 58
GL G+ N+GNTCY+NSVLQCLS+T L+ D ++ + LV+A F
Sbjct: 290 GLLGLYNSGNTCYMNSVLQCLSHTRQMTEFFLSGDAKAEAAEATRTKARRSSLVNAYTEF 349
Query: 59 MKMMWS-SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
++ MW + + + A+ S ++QQDAQEFL +LL L+EE P +
Sbjct: 350 LEQMWKPKDDKAVTPNHLRSAMSSLIPMVRTSEQQDAQEFLQFLLCCLHEETNK-PKKRL 408
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
S+ S++S+ S A W++ + + S SD+F+GQ+RS++ C+ C+ TS +E FW
Sbjct: 409 ESSESSSSTNLTPSELARSSWKRSLSYDNSYLSDLFMGQVRSTLTCTTCRNTSLSFESFW 468
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
LSLP+P + + S+C + + E + PV
Sbjct: 469 SLSLPLPSKSKSHSSSLF---ITISDCFQLYSAEERLDSDNQPV---------------- 509
Query: 238 GETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDM 295
C CK K +IQ P +LIL KRF+ + + K+ S +K P
Sbjct: 510 -------CTKCKSSQPSTKKLDIQIFPKILILHLKRFTVRNRYCTKLPSNVKVPTTVTVE 562
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
E I+ V+S + Y+L + NH G T +GHY A C+ +G+WY ++D VV+
Sbjct: 563 E--IAVDKESVKS-FKYELYGIINHSG-TISFGHYKAECKH--SGKWYTFNDRVVTSSSE 616
Query: 356 QTVESAEAEHGAYILVYQR 374
+ + A Y+L Y++
Sbjct: 617 AMITNPSA--SPYVLFYEK 633
>gi|440797226|gb|ELR18321.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 926
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 173/381 (45%), Gaps = 17/381 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G G+AN GNTCY N+ +QCLSN P R L K LV + MW
Sbjct: 138 GACGLANLGNTCYANAAMQCLSNCPPLRTYFLRYMARQVKGRKKTSPLVFHFTQLIYDMW 197
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
L +L +R + F G QQD+QEF+ LL L+E+ K + S S+
Sbjct: 198 GGRYSSLRPGEVLREIRRFNPMFGGYAQQDSQEFMRCLLDRLHEDTKEELPRIESSPTSS 257
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S+ G + ++++ + G L S ++C C + S + F++LS+P+
Sbjct: 258 GSADS-GEKEKETKPPQGHDSDSNGVVESTPGYLLSRIKCLKCGKVSPTKDAFYDLSIPI 316
Query: 184 PPGGG-TLYECQLRSSVRCSNCKRTSTVYEIFWELS--LPVPPGGGTLYECLNKFFNGET 240
P ++ + SN KR S +F +++ L + TL +CL F E
Sbjct: 317 PDDKMLDKVTKEIEAEGVLSNSKRPSP--GLFSKVTNWLMLSNRTVTLEDCLQAFCTKEE 374
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLD 294
L C++CK +D K I + P +L + KRF S F K++ ++FP LD
Sbjct: 375 LMGADRYRCEHCKTLNDSQKFLRIAQPPELLCIHIKRFRHDSYFGGKLSDVVQFPLRDLD 434
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ + + YDL +V NHIG + GHY AY + G+WY +DD+ + V
Sbjct: 435 ISRFCEQDADAPQVSMKYDLVSVVNHIGGIS-GGHYIAYALNDEDGKWYEFDDSWATAVS 493
Query: 355 AQTVESAEAEHGAYILVYQRR 375
TV + E AY+L Y R+
Sbjct: 494 EDTVRNKE----AYVLFYLRQ 510
>gi|145475787|ref|XP_001423916.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390977|emb|CAK56518.1| unnamed protein product [Paramecium tetraurelia]
Length = 522
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 175/371 (47%), Gaps = 43/371 (11%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NS LQC+ NTP F + L+++I + K + Q+ +K M ++
Sbjct: 191 GLHNIGNTCYFNSALQCIINTPKFNDKFLSDEIKQELNPKHK-QVALQYWRLLKQMRTTN 249
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
N N + A+ S TKKF G++Q+D+QEFL LL L+E+ V + + +
Sbjct: 250 NTSENPVQLKQAISSSTKKFGGHRQEDSQEFLRALLTCLHEDLNRVTGKPIYKELTADLN 309
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
KQ + ++ F+ + S+ +D F GQL S V CS CK S ++ F +LSL P
Sbjct: 310 KQSLEDISNTWFNYFKGRDNSLVTDYFTGQLLSRVTCSVCKNQSLAFDNFQDLSLAFPNI 369
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-TC 245
G TL + L + + E+++ TC
Sbjct: 370 SGNQI-----------------------------------TLEDMLKYYLSEESINQYTC 394
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYISASG 303
C++Q + EI RLP +L++ KRF +K+ IKF + LD+ +I S
Sbjct: 395 GKCRQQRKCTRQLEIWRLPDILVIHLKRFYYKGPMKKKINIDIKFGAK-LDLGQFIINSS 453
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
+ Y+L + H G +GHY A C+ T +WY +D+ V + + S E+
Sbjct: 454 DKSTLNCNYNLYGIVKHYGDLN-FGHYFAECKHPFTMKWYQLNDSSVQEIKPKV--SYES 510
Query: 364 EHGAYILVYQR 374
++ AY+L+Y R
Sbjct: 511 DNSAYLLLYSR 521
>gi|444522041|gb|ELV13282.1| Ubiquitin carboxyl-terminal hydrolase 21 [Tupaia chinensis]
Length = 673
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 173/391 (44%), Gaps = 74/391 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 327 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 386
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 387 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 446
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 447 NGPAPS--APRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 504
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 505 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 534
Query: 227 TLYECLNKFFNGETLH----NTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKV 282
+C + F E L C C++++ K +QR P +L+L +K
Sbjct: 535 ---DCFSLFTKEEELELENAPVCDRCRQKTRSTKKLTVQRFPRILVL-------RSIKKS 584
Query: 283 TSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
+ + FP + L + + S TY L A+ NH G + YGHYTA CR + TG W
Sbjct: 585 SVGVDFPLQRLSLGDFASDKA----GSPTYQLYALCNHSG-SVHYGHYTALCRCQ-TG-W 637
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 638 HVYNDSRVSPVSENQVASSE----GYVLFYQ 664
>gi|7363366|gb|AAF61308.1|AF233442_1 NEDD8-specific protease [Homo sapiens]
Length = 381
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 178/401 (44%), Gaps = 79/401 (19%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFM 59
+ G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + +
Sbjct: 23 LGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVI 82
Query: 60 KMMWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-----KVVP 113
+W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 83 GALWHLDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 142
Query: 114 DQYNGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRC 163
NG S ++ G+ RA W+++ E S D+FVGQL+
Sbjct: 143 ILANGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLK----- 195
Query: 164 SNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 223
S ++C C ST +E+F +LSLP+P
Sbjct: 196 ---------------------------------SCLKCQACGYRSTTFEVFCDLSLPIPK 222
Query: 224 ---GGGTLY--ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF 274
GG ++ +C N F E L + C C++++ K +QR P +L+L RF
Sbjct: 223 KGFAGGKVFLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 282
Query: 275 SSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
S++ +K + + FP + L + + S Y L A+ NH G + YGHYTA
Sbjct: 283 SASRGSIKKSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTA 337
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
CR + TG W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 338 LCRCQ-TG-WHVYNDSRVSPVSENQVASSE----GYVLFYQ 372
>gi|391346587|ref|XP_003747554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Metaseiulus occidentalis]
Length = 332
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 165/371 (44%), Gaps = 62/371 (16%)
Query: 17 INSVLQCLSNTPA---FRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSGN-LVLNT 72
+NS++QCL +T FR D+ + S +G L A + + MW+S + ++
Sbjct: 1 MNSIIQCLVHTQLADYFRGRAFRADV--NTSSLMKGDLAQAFASLVTSMWTSKDGSAISP 58
Query: 73 KAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSF 132
++ Y +F G QQDAQEFL YLL L+E+ V Q G+
Sbjct: 59 TEFRSQIQKYAPRFMGYSQQDAQEFLRYLLQGLHEDVNRVRIQPRGTCLPEIDGSLSDHQ 118
Query: 133 RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 192
+A W ++ + S D+FVGQL+
Sbjct: 119 KAAESWRRYLRVDDSRIVDLFVGQLK---------------------------------- 144
Query: 193 CQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG---GGTLYECLNKFFNGETLHN----TC 245
S+++CS C S ++ FW+LSLP+ TL +CL F E L TC
Sbjct: 145 ----STLKCSECGHKSVTFDPFWDLSLPISDSRCTASTLQQCLEYFTKEEVLDGDEKPTC 200
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYISASG 303
CKK+ + K I + P +L+L KRF S + K+ + ++FP LD+ ++S G
Sbjct: 201 DQCKKRQRMTKNLSIWKCPKILVLHLKRFGNSERYRSKLETNVQFPLRNLDISAFMSNGG 260
Query: 304 RRVESRY-TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
+S + Y+L VSNH G T GHYTA C +WY +D VS V V S+E
Sbjct: 261 ---DSHFCKYNLIGVSNHSGSTH-SGHYTATCLNPINRQWYSCNDARVSEVGESRVVSSE 316
Query: 363 AEHGAYILVYQ 373
AY+L Y+
Sbjct: 317 ----AYVLFYE 323
>gi|343426659|emb|CBQ70188.1| related to Ubiquitin carboxyl-terminal hydrolase 4 [Sporisorium
reilianum SRZ2]
Length = 1184
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 177/412 (42%), Gaps = 92/412 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLS-NTPAFRNVL-------LNEDIPIHPDSKSQGQLVDAL 55
GL G+ N GN+CY+NS LQCLS TP R +L +N P+ +QGQL AL
Sbjct: 823 GLTGLKNLGNSCYMNSTLQCLSATTPLARFLLDGSYKQAINRTNPL----GTQGQLATAL 878
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------- 108
+ +MW ++ A+ + F G Q D+QEFL LL L+E+
Sbjct: 879 AGLVHVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVVTR 938
Query: 109 ---AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN 165
++ P++ N T +Q+ S + W ++ S+ D F GQ R+ + C
Sbjct: 939 PAAVEMTPEREN---ELETLPQQIASVKE---WSIYRMRNDSLVVDWFQGQFRNKLTCLT 992
Query: 166 CKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG 225
C +TST YE F LSLPVP G G G
Sbjct: 993 CGKTSTTYEAFTYLSLPVPHGRGV----------------------------------GK 1018
Query: 226 GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFT 279
L +CL+ F E L C C+K K I RLP +L++ KRFS FT
Sbjct: 1019 VALQQCLDAFVREEVLDKADMWNCPRCRKPRKATKRLSISRLPQILLIHLKRFSFKGPFT 1078
Query: 280 QKVTSPIKFP-REGLDMEYY---------------ISASGRRVESRYTYDLCAVSNHIGK 323
K+ + + FP LD+ Y ++ S +V Y YDL AV++H G
Sbjct: 1079 DKIDTTVTFPTNSALDLTNYMPPPLPPGTVVKGGNVAVSQSQVPP-YLYDLYAVTHHFGS 1137
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYTA R W+ DD+ ++ D + + + + Y+L ++RR
Sbjct: 1138 LNT-GHYTATIR--SNREWWYCDDSRIAKGDDRQLHT----NSPYVLWFRRR 1182
>gi|336381480|gb|EGO22632.1| hypothetical protein SERLADRAFT_372069 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1030
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 173/408 (42%), Gaps = 87/408 (21%)
Query: 6 NGIANAGNTCYINSVLQCLSNTPAFRNVL--------LNEDIPIHPDSKSQGQLVDALVN 57
+G+ N GNTCY+NS +QCLS T F +N P+ ++G L A N
Sbjct: 668 SGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVNMLNPL----GTKGNLALAFSN 723
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ M S L A ++ S+ +F G++Q D+QEFL +LL L+E+ V
Sbjct: 724 ILYEMAHSELPHLTPNAFRRSICSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRV---LQ 780
Query: 118 GSTYSNTSSKQV------GSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
Y T ++ + W ++ S+ D F GQ R+ + C C +TST
Sbjct: 781 KPHYEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRMECLTCHKTST 840
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYEC 231
Y F L+LP+P +R S + S L C
Sbjct: 841 TYNTFMYLTLPIP---------IVRGSSKVS-------------------------LQSC 866
Query: 232 LNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSP 285
L+ F E L NT C CK K + RLPP+L++ KRFS FT K+ +
Sbjct: 867 LDAFVKEEILENTDAWHCPNCKALRKATKRLSLSRLPPILLIHLKRFSFKGPFTDKIETV 926
Query: 286 IKFPREGLDMEYY------------------ISASGRRVES-RYTYDLCAVSNHIGKTAL 326
+ FP LD+ Y +S R+++ Y YDL V+NH G T
Sbjct: 927 VDFPLRTLDLTNYMPPPLPPGMDKGNMNGANLSTEDPRMQTPPYKYDLYGVTNHFG-TLS 985
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYTA+ G W DD+ V+P DA+ V AY+L Y+R
Sbjct: 986 GGHYTAFIASRGG--WVYCDDSRVTPTDAKQV----VGRPAYVLYYKR 1027
>gi|321250129|ref|XP_003191699.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
gi|317458166|gb|ADV19912.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
Length = 1310
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 182/414 (43%), Gaps = 96/414 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVDAL 55
G+ G+ N GNTCY+NS +QCLS T F L N++ P+ ++G+L A
Sbjct: 947 GITGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFSRSINKENPL----GTKGELAKAW 1002
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AK 110
++++WS L+ + + +F G+ Q D+QEFL ++L L+E+ K
Sbjct: 1003 AELLRVLWSEKYEFLSPMTFRKQITHFAPQFLGSDQHDSQEFLSFVLDGLHEDLNRIKRK 1062
Query: 111 VVPDQYNGSTYS--NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
P + + ++ +V S R W ++ S+ D+F GQ
Sbjct: 1063 PPPVEMTPEREAMLESAPPEVASERE---WAIYRQRNDSLIVDLFQGQY----------- 1108
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-- 226
R+ + C C +TST Y+ F +SLPVP G
Sbjct: 1109 ---------------------------RNRLECLTCHKTSTTYDAFMYMSLPVPSGKTKV 1141
Query: 227 TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---FT 279
+ E +++F E + C CK K I RLPPVL++ KRF++ F
Sbjct: 1142 VIQELIDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLPPVLLIQLKRFTTRDGLFW 1201
Query: 280 QKVTSPIKFPREGLDMEYYIS-------ASGRRV------ESR-----YTYDLCAVSNHI 321
K +P+ FP GLD+ Y+ SGR+V + R + YDL VSNH+
Sbjct: 1202 DKSETPVIFPIRGLDLTRYLPGPAGSSVGSGRQVGPDGTFDPRAQVGPFKYDLYGVSNHM 1261
Query: 322 GKTALYGHYTAYCR-REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
G T GHYTA+ + +EG W +D+ V P + V S AYIL Y+R
Sbjct: 1262 G-TLSSGHYTAFVKSKEG---WKYCEDSQVMPAQEKDVIS----RPAYILFYKR 1307
>gi|58259279|ref|XP_567052.1| ubiquitin-specific protease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107425|ref|XP_777597.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260291|gb|EAL22950.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223189|gb|AAW41233.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1312
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 182/414 (43%), Gaps = 96/414 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVDAL 55
G+ G+ N GNTCY+NS +QCLS T F L N++ P+ ++G+L A
Sbjct: 949 GITGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFARSINKENPL----GTKGELAKAW 1004
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AK 110
++++WS L+ + + +F G+ Q D+QEFL ++L L+E+ K
Sbjct: 1005 AELLRVLWSEKYEFLSPMTFRKQITHFAPQFLGSDQHDSQEFLSFVLDGLHEDLNRVKRK 1064
Query: 111 VVPDQYNGSTYS--NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
P + + ++ +V S R W ++ S+ D+F GQ
Sbjct: 1065 PPPVEMTPEREAMLESAPPEVASERE---WAIYRQRNDSLIVDLFQGQY----------- 1110
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-- 226
R+ + C C +TST Y+ F +SLPVP G
Sbjct: 1111 ---------------------------RNRLECLTCHKTSTTYDAFMYMSLPVPSGKTKV 1143
Query: 227 TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---FT 279
+ E +++F E + C CK K I RLPPVL++ KRF++ F
Sbjct: 1144 VIQELIDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLPPVLLIQLKRFTTRDGLFW 1203
Query: 280 QKVTSPIKFPREGLDMEYYIS-------ASGRRV------ESR-----YTYDLCAVSNHI 321
K +P+ FP GLD+ Y+ SGR+V + R + YDL VSNH+
Sbjct: 1204 DKSETPVIFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFDPRAQVGPFKYDLYGVSNHM 1263
Query: 322 GKTALYGHYTAYCR-REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
G T GHYTA+ + +EG W +D+ V P + V S AYIL Y+R
Sbjct: 1264 G-TLSSGHYTAFVKSKEG---WKYCEDSQVMPAQEKDVIS----RPAYILFYKR 1309
>gi|405118112|gb|AFR92887.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii H99]
Length = 1246
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 182/414 (43%), Gaps = 96/414 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVDAL 55
G+ G+ N GNTCY+NS +QCLS T F L N++ P+ ++G+L A
Sbjct: 883 GITGLKNLGNTCYMNSTIQCLSATYPFSTFFLDGTFARSINKENPL----GTKGELAKAW 938
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AK 110
++++WS L+ + + +F G+ Q D+QEFL ++L L+E+ K
Sbjct: 939 AELLRVLWSEKYEFLSPMTFRKQITHFAPQFLGSDQHDSQEFLSFVLDGLHEDLNRIKRK 998
Query: 111 VVPDQYNGSTYS--NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
P + + ++ +V S R W ++ S+ D+F GQ
Sbjct: 999 PPPVEMTPEREAMLESAPPEVASERE---WAIYRQRNDSLIVDLFQGQY----------- 1044
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-- 226
R+ + C C +TST Y+ F +SLPVP G
Sbjct: 1045 ---------------------------RNRLECLTCHKTSTTYDAFMYMSLPVPSGKTKV 1077
Query: 227 TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---FT 279
+ E +++F E + C CK K I RLPPVL++ KRF++ F
Sbjct: 1078 VIQELIDEFVKAEVMEKENAWYCPRCKTNRRASKTLTIARLPPVLLIQLKRFTTRDGLFW 1137
Query: 280 QKVTSPIKFPREGLDMEYYIS-------ASGRRV------ESR-----YTYDLCAVSNHI 321
K +P+ FP GLD+ Y+ SGR+V + R + YDL VSNH+
Sbjct: 1138 DKSETPVIFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFDPRAQVGPFKYDLYGVSNHM 1197
Query: 322 GKTALYGHYTAYCR-REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
G T GHYTA+ + +EG W +D+ V P + V S AYIL Y+R
Sbjct: 1198 G-TLSSGHYTAFVKSKEG---WKYCEDSQVMPAQEKDVIS----RPAYILFYKR 1243
>gi|443714551|gb|ELU06915.1| hypothetical protein CAPTEDRAFT_166013 [Capitella teleta]
Length = 981
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 176/390 (45%), Gaps = 74/390 (18%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ-----GQLVDAL 55
++PGL G+ N GNTCY+NS++QCLSNT L+ DI + +K G + +
Sbjct: 638 VAPGLCGLRNIGNTCYMNSIIQCLSNTIPLTVYFLS-DIYVQDINKENVFGKGGVIAEEY 696
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV--- 112
K +WS +N + + L + F ++ QD+QE LL+L+ L+E+ V
Sbjct: 697 SVVNKGLWSGQYKSINPRDLWSTLGRFYSLFASHEHQDSQELLLFLMDGLHEDLNKVKKR 756
Query: 113 ---PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
P+Q N + S +Q S W + S+ ++F GQ +
Sbjct: 757 PQLPEQNN----NGVSDQQAAST----AWYMHKQINESIIVELFQGQFK----------- 797
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TL 228
S+V C C + S ++ F LSLP+ G +L
Sbjct: 798 ---------------------------STVTCMTCSKESVTFDAFVNLSLPIAQGTRVSL 830
Query: 229 YECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKV 282
+ECL+ F E++ C CK + + K + +LPP+LI+ KRF + K+
Sbjct: 831 HECLSLFSKRESMTGESRWDCPQCKCKREATKRIVVWKLPPILIIHLKRFYYRGMWRDKI 890
Query: 283 TSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
T+ + +P EGLDM Y++ + ++L AVSNH G T GHYTA + +W
Sbjct: 891 TTHVDYPLEGLDMGRYVAGPKKPP----VFNLYAVSNHYG-TLDGGHYTASVKNAKNHKW 945
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
Y YDDT V V V+S+ YIL Y
Sbjct: 946 YKYDDTEVYEVSKSDVQSS----AGYILFY 971
>gi|125852016|ref|XP_692003.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Danio
rerio]
Length = 404
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 166/385 (43%), Gaps = 64/385 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G G+ N GNTC++N+++QCLS+T + R+ L S + L+D + +W
Sbjct: 60 GQVGLRNVGNTCFLNAIVQCLSHTRSLRDYCLMRAYVQDKHSNQEPVLMDEFSKVLAGLW 119
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+G +N + F G QQDAQEFL +LL L+ E P +
Sbjct: 120 ECDAGETTVNPGKFYRVFKESVPYFSGYSQQDAQEFLRFLLDRLHTEINRRPSKRPAVIE 179
Query: 122 SNTSS--KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ + S A W++ + S D+F GQL
Sbjct: 180 RKEPAYTRFRISEEAFAMWQRHLDRDDSKIVDLFSGQL---------------------- 217
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-----TLYECLNK 234
RSS+ CS C S +++F +LSLP+P TL ECL+
Sbjct: 218 ----------------RSSLHCSVCSHYSNTFDVFCDLSLPIPKKSDYGRAVTLRECLDL 261
Query: 235 FFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFT-QKVTSPIKF 288
F E L C+ C ++++ K IQR P VL++ RF+ S F+ K T P+ F
Sbjct: 262 FSQEEKLDKENSPMCERCNRRTESTKRLTIQRFPRVLVIHLNRFAMSRFSISKSTVPVSF 321
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P LD+ + V YDL AV NH G T GHYTA CR E W Y+D+
Sbjct: 322 PLTALDLGLFGPVDCGPV----LYDLYAVCNHSG-TVNMGHYTAACREEEG--WCFYNDS 374
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQ 373
V + + ++S + AY+L Y+
Sbjct: 375 CVDAISEEKLQSNQ----AYVLFYE 395
>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 434
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 172/410 (41%), Gaps = 90/410 (21%)
Query: 6 NGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVDALVN 57
+G+ N GNTCY+N+ LQCLS T F L N P+ ++GQL A
Sbjct: 71 SGLKNLGNTCYMNAPLQCLSATVPFARFFLENRWQRAVNTVNPL----GTRGQLAGAFAK 126
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV----- 112
++ MW + L+ ++ Y F G Q DAQEF+ +LL L+E+ +
Sbjct: 127 MVQEMWQANFTYLDPTNFRRSVCHYAPSFAGGDQHDAQEFISFLLDGLHEDLNRILQKPA 186
Query: 113 ---PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
P + + + G W+++Q + S+ D F GQ R+ + C C +T
Sbjct: 187 NDDPTPEHEAELERLPQQIAGE----QEWQRYQRRDDSLVVDYFQGQFRNKLECMTCHKT 242
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
ST Y F LSLP+P G G S V TL
Sbjct: 243 STTYNAFMYLSLPIPTGRGM-------SKV---------------------------TLQ 268
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVT 283
+C++ F E + C +C K I RLPPVL++ KRFS F K+
Sbjct: 269 QCMDAFVKEEIMEKGDAWKCPHCMALRKATKQLSISRLPPVLLIHLKRFSYKGPFVDKLE 328
Query: 284 SPIKFPREGLDMEYYISA-------------------SGRRVESRYTYDLCAVSNHIGKT 324
+ + FP + LD+ Y+ + R Y Y+L AV+NH G +
Sbjct: 329 TLVDFPLKDLDLTNYMPSPLPPGVDKGFSQSSPIKLDDPRSQIPPYRYELYAVTNHFG-S 387
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYTA+ +G+ W DD+ +S + + + + AYIL Y+R
Sbjct: 388 LTSGHYTAFIASKGS--WVYCDDSRLSNAEGREIVAKP----AYILFYKR 431
>gi|294955878|ref|XP_002788725.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904266|gb|EER20521.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 816
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 191/435 (43%), Gaps = 77/435 (17%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQG-------QLVDALVNFM 59
G N GNTC++N+ LQCL +T + L N P ++ G +LV+A M
Sbjct: 69 GFFNLGNTCFMNAALQCLVHTAPLQKALRN-----MPPPRAHGGTLPPARRLVEACRTIM 123
Query: 60 KMMWSSGNL---------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-- 108
+ W S +L N +A+L A++ F G QQD+QEFL +L A++EE
Sbjct: 124 EEQWGSEDLPHKVITTSDAYNPEAMLKAVQELNPMFQGYHQQDSQEFLHCVLDAMHEELR 183
Query: 109 -----------AKVVPDQYNGST-YSNTSSKQVGS-FRALHYW--------------EKF 141
A +P++ T YS+ +S+ GS +R EK
Sbjct: 184 RRVPRYPEAYLAVHMPEELPSPTAYSSVASEAAGSEYRESFSEQSSSSSQSQSPPSVEKL 243
Query: 142 --QTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSV 199
+T+ +S SD F+G+L S+VRC +CK +ST E +++SLP+P + S
Sbjct: 244 AEETSWSSPVSDAFLGKLISTVRCMHCKNSSTTIEPVYDVSLPIPSAPVDFSKISGGSFA 303
Query: 200 RCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQY----CKKQSDLV 255
+ K S + + +LY+CL F E L + QY C+K+ D
Sbjct: 304 ASPSMKVCSGFWGWMNSARAYLGDAKVSLYDCLATFCQNEELTGSEQYHCDCCEKKCDGR 363
Query: 256 KLYEIQRLPPVLILWFKRFSSN---FTQKVTSPIKFP-REGLDMEYYI-----SASGRRV 306
K P L++ RF + F QK + + FP E L++ ++ SA R
Sbjct: 364 KFIRFYSTPETLVIHLNRFRYDEGWFGQKNSRAVSFPVEEELNIAQFMHMDSASAVANRS 423
Query: 307 E-------SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
E Y L + HIG GHY AYCR E T W YDD V+ VD+ V
Sbjct: 424 EVVGGVGNQTTAYRLTGLIRHIGSVG-SGHYVAYCRHEETDEWLEYDDARVTKVDSAQVA 482
Query: 360 SAEAEHGAYILVYQR 374
E AY+L YQ+
Sbjct: 483 GFE----AYVLFYQK 493
>gi|344297764|ref|XP_003420566.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Loxodonta africana]
Length = 367
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 169/376 (44%), Gaps = 66/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I KS G++ A M MW
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-ITALQKSCGEVATAFAYLMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + F QQDAQEFL+Y+L L+E K +Y+ +Y
Sbjct: 101 LGDSGCVSPEIFRSALGNLYPAFMKKTQQDAQEFLIYVLNDLHEALK----KYHRRSYEK 156
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S+++ K TE+S+ + +F GQL V C
Sbjct: 157 GSTRRC--------CRKVIATESSIITRLFEGQLNYDVIC-------------------- 188
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
++C NC + E+F LSLP+P +L +CL FF +TL
Sbjct: 189 ---------------LKCENCSYKN---EVFTVLSLPIPSEYECSLQDCLQCFFQQDTLT 230
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDME 296
C +C+ + + I + P ++I KRF T +K+ + I +P LD+
Sbjct: 231 WNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDVQGTMKRKLRTHIHYPLTNLDLT 290
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y LCAV NH G GHYTA+CR T WY +DDT VS +
Sbjct: 291 PYICPIFRK---HPKYSLCAVVNHFGDLD-GGHYTAFCRNSVTQAWYSFDDTRVSEIPNT 346
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 347 SVQTAT----AYLLFY 358
>gi|71022651|ref|XP_761555.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
gi|46101424|gb|EAK86657.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
Length = 1198
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 171/407 (42%), Gaps = 83/407 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNT-PAFRNVL-------LNEDIPIHPDSKSQGQLVDAL 55
GL G+ N GN+CY+NS LQCLS T P R +L +N P+ +QGQL AL
Sbjct: 840 GLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKTAINRTNPL----GTQGQLATAL 895
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
+ +MW ++ A+ + F G Q D+QEFL LL L+E+ V +
Sbjct: 896 AGLVHVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVTTR 955
Query: 116 YNGSTYS-------NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
+ T +Q+ S + W ++ S+ D F GQ R+ + C C +
Sbjct: 956 PAAIEMTPARENELETLPQQIASIKE---WGIYRMRNDSLVVDWFQGQFRNKLTCLTCGK 1012
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
TST YE F LSLPVP G G G L
Sbjct: 1013 TSTTYEAFTYLSLPVPSGRGV----------------------------------GKVAL 1038
Query: 229 YECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKV 282
+CL+ F E L C CK+ K I RLP VL++ KRFS FT K+
Sbjct: 1039 QQCLDAFVREEVLDKGDMWNCSRCKRPRKATKRLSISRLPRVLLIHLKRFSFKGPFTDKI 1098
Query: 283 TSPIKFP-REGLDMEYYISASGRRV-------------ESRYTYDLCAVSNHIGKTALYG 328
+ + FP LD+ Y+ + Y YDL A ++H G G
Sbjct: 1099 DTTVTFPVNTALDLTNYMPPPLPPGAAAAAGVKESLSQQPPYLYDLYAATHHFGSLNT-G 1157
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
HYTA + W+ DD+ ++ D + A++ AY+L ++R+
Sbjct: 1158 HYTATVK--SANDWWYCDDSRITKGDTSHL----ADNSAYVLWFRRK 1198
>gi|353230425|emb|CCD76596.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 654
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 178/386 (46%), Gaps = 67/386 (17%)
Query: 6 NGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLV--------DALVN 57
NG+ N GNTCYINSV+Q LS+T A + L D + Q V +V
Sbjct: 301 NGLRNLGNTCYINSVVQSLSHTRALVHYFL--------DGFHERQAVVSNRLGYGGEIVK 352
Query: 58 FMKMMWSSGNLVLNTKAILLALRS----YTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP 113
+M+ S+ N A L RS + KF N QQD+ EFLL+LL L+E+
Sbjct: 353 HFEMLLSALYNQPNQDAELYKFRSAVAKHQSKFSSNDQQDSLEFLLFLLDGLHEDLNEAR 412
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
+ N N S+K + + Y + EA+ I +S+ S+
Sbjct: 413 SEKN-----NNSTKLKHNESMIEYTSSNEQAEAAW---IQHKDFNNSIIVSS-------- 456
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
++ LRS+V+C++C TST +++F LSLP+ L +CL
Sbjct: 457 -----------------FQGLLRSTVKCNSCHVTSTTFDVFMVLSLPIEQNKCQLTDCLK 499
Query: 234 KFFNGETLHNTCQY----CKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIK 287
F E + C++ C + D K E+ +LP LI+ KRF + +K T+ +
Sbjct: 500 LFLEKEEMVGQCRWHCPSCNTRRDASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVD 559
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP E LDM +I G ++ S Y L +V NH G T GHYT +CR GRWY YDD
Sbjct: 560 FPIECLDMSSFI--VGPKLHSS-EYALYSVLNHRG-TMESGHYTTFCRNIRDGRWYEYDD 615
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQ 373
VS +D +++ AYIL Y+
Sbjct: 616 ENVSLLDKNEIQND----NAYILFYE 637
>gi|294898802|ref|XP_002776382.1| hypothetical protein Pmar_PMAR013108 [Perkinsus marinus ATCC 50983]
gi|239883320|gb|EER08198.1| hypothetical protein Pmar_PMAR013108 [Perkinsus marinus ATCC 50983]
Length = 667
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 191/435 (43%), Gaps = 77/435 (17%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQG-------QLVDALVNFM 59
G N GNTC++N+ LQCL +T + L N P ++ G +LV+A M
Sbjct: 87 GFFNLGNTCFMNAALQCLVHTAPLQKALRN-----MPPPRAHGGTLPPARRLVEACRTIM 141
Query: 60 KMMWSSGNL---------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-- 108
+ W S +L N +A+L A++ F G QQD+QEFL +L A++EE
Sbjct: 142 EEQWGSEDLPQKVITTSDAYNPEAMLKAVQELNPMFQGYHQQDSQEFLHCVLDAMHEELR 201
Query: 109 -----------AKVVPDQYNGST-YSNTSSKQVGS-FRALHYW--------------EKF 141
A +P++ T YS+ +S+ GS +R EK
Sbjct: 202 RRVPRYPEAYLAVHMPEELPSPTAYSSVASEAAGSEYRESFSEQSSSSSQSQSPPSVEKL 261
Query: 142 --QTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSV 199
+T+ +S SD F+G+L S+VRC +CK +ST E +++SLP+P + S
Sbjct: 262 AEETSWSSPVSDAFLGKLISTVRCMHCKNSSTTIEPVYDVSLPIPSAPVDFSKISGGSFA 321
Query: 200 RCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQY----CKKQSDLV 255
+ K S + + +LY+CL F E L + QY C+K+ D
Sbjct: 322 ASPSMKVCSGFWGWMNSARAYLGDAKVSLYDCLATFCQNEELTGSEQYHCDCCEKKCDGR 381
Query: 256 KLYEIQRLPPVLILWFKRFSSN---FTQKVTSPIKFP-REGLDMEYYI-----SASGRRV 306
K P L++ RF + F QK + + FP E L++ ++ SA R
Sbjct: 382 KFIRFYSTPETLVVHLNRFRYDEGWFGQKNSRAVSFPVEEELNIAQFMHMDSASAVANRS 441
Query: 307 E-------SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
E Y L + HIG GHY AYCR E T W YDD V+ VD+ V
Sbjct: 442 EVVGGVGNQTTAYRLTGLIRHIGSVG-SGHYVAYCRHEETDEWLEYDDARVTKVDSAQVA 500
Query: 360 SAEAEHGAYILVYQR 374
E AY+L YQ+
Sbjct: 501 GFE----AYVLFYQK 511
>gi|340373937|ref|XP_003385496.1| PREDICTED: hypothetical protein LOC100638383 [Amphimedon
queenslandica]
Length = 1278
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 173/370 (46%), Gaps = 47/370 (12%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALV 56
+ PGL G+ N GNTC+++SV+QCL TP N D+ S G L +
Sbjct: 940 IGPGLTGLRNLGNTCFMSSVIQCLCATPPLVKYFFNGQYRADLNRSNPLGSGGILAEEFY 999
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-AKVVPDQ 115
+ +W + + F GN+Q D+QEFL+YLL L+E+ KV+
Sbjct: 1000 ILVAAIWLGKFRYIAPLEFKNTVSQVAPYFAGNEQHDSQEFLVYLLDGLHEDLNKVLVKS 1059
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
Y ++ V +A W+ + S+ D+F G L+S++ C +C + ++E
Sbjct: 1060 YVELPDTDGVPDPVAVEQA---WQAHKKRNNSIIIDLFHGLLKSTITCLSCGKKKVMFEP 1116
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F LS+P+P G R+S +C + T E GT NK+
Sbjct: 1117 FVSLSVPIPRG---------RTSCSYHDCFKLFTAKERMT----------GT-----NKW 1152
Query: 236 FNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGL 293
F C CK D K I RLPP+L+L FKRF T +K+++ I FP E L
Sbjct: 1153 F--------CPQCKASRDSEKTLFIWRLPPILLLHFKRFQDKGTVREKLSTSISFPIESL 1204
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
D+ Y+ G R ++Y+ L A+SNH G + GHYTA CR + +++ +DD V
Sbjct: 1205 DLNSYV--VGPRPTNQYS--LYAISNHTG-SLQSGHYTATCRHPRSQKFHFFDDQDVRQT 1259
Query: 354 DAQTVESAEA 363
+Q + +++
Sbjct: 1260 SSQNINVSDS 1269
>gi|256081222|ref|XP_002576871.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 1027
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 178/386 (46%), Gaps = 69/386 (17%)
Query: 6 NGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLV--------DALVN 57
NG+ N GNTCYINSV+Q LS+T A + L D + Q V +V
Sbjct: 676 NGLRNLGNTCYINSVVQSLSHTRALVHYFL--------DGFHERQAVVSNRLGYGGEIVK 727
Query: 58 FMKMMWSSGNLVLNTKAILLALRS----YTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP 113
+M+ S+ N A L RS + KF N QQD+ EFLL+LL L+E+
Sbjct: 728 HFEMLLSALYNQPNQDAELYKFRSAVAKHQSKFSSNDQQDSLEFLLFLLDGLHED----- 782
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
N +N S+K + + Y + EA+ I +S+ S+
Sbjct: 783 --LNEVKKNNNSTKLKHNESMIEYTSSNEQAEAAW---IQHKDFNNSIIVSS-------- 829
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
++ LRS+V+C++C TST +++F LSLP+ L +CL
Sbjct: 830 -----------------FQGLLRSTVKCNSCHVTSTTFDVFMVLSLPIEQNKCQLTDCLK 872
Query: 234 KFFNGETLHNTCQY----CKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIK 287
F E + C++ C + D K E+ +LP LI+ KRF + +K T+ +
Sbjct: 873 LFLEKEEMVGQCRWHCPSCNTRRDASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVD 932
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP E LDM +I G ++ S Y L +V NH G T GHYT +CR GRWY YDD
Sbjct: 933 FPIECLDMSSFI--VGPKLHSS-EYALYSVLNHRG-TMESGHYTTFCRNIRDGRWYEYDD 988
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQ 373
VS +D +++ AYIL Y+
Sbjct: 989 ENVSLLDKNEIQND----NAYILFYE 1010
>gi|388856574|emb|CCF49880.1| related to Ubiquitin carboxyl-terminal hydrolase 4 [Ustilago hordei]
Length = 1223
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 178/411 (43%), Gaps = 92/411 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNT-PAFRNVL-------LNEDIPIHPDSKSQGQLVDAL 55
GL G+ N GN+CY+NS LQCLS T P R +L +N P+ +QGQL + L
Sbjct: 864 GLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKQAINRTNPL----GTQGQLANTL 919
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------- 108
+ +MW ++ A+ + F G Q D+QEFL LL L+E+
Sbjct: 920 AGLIHVMWGEKYAFISPVTFREAMAKFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVVTR 979
Query: 109 ---AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN 165
++ P++ N T +Q+ S + W ++ S+ D F GQ R+ + C
Sbjct: 980 PAAIEMTPEREN---ELETLPQQIASLKE---WSIYRMRNDSLVVDCFQGQFRNKLTCLT 1033
Query: 166 CKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG 225
C +TST YE + LSLPVP G G
Sbjct: 1034 CGKTSTTYEAYTYLSLPVPHGRGA----------------------------------NK 1059
Query: 226 GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFT 279
TL +CL+ F E L C CKK K I RLP +L++ KRFS FT
Sbjct: 1060 VTLQQCLDAFVREEVLDKADMWNCPRCKKPRKATKRLSISRLPHILLIHLKRFSFKGPFT 1119
Query: 280 QKVTSPIKFP-REGLDMEYYI--------SASGRRV----ESRYTYDLCAVSNHIGKTAL 326
K+ + + FP LD+ Y+ + +G V + Y YDL A ++H G
Sbjct: 1120 DKIDTTVTFPTNTSLDLTNYMPPPLPPGSAGAGALVSQSQKPPYLYDLYAATHHFGSLNT 1179
Query: 327 YGHYTA--YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYTA C +E W+ DD+ + D + + + + Y+L ++RR
Sbjct: 1180 -GHYTATVRCNKE----WWYCDDSRILKGDGRQLHT----NSPYVLWFRRR 1221
>gi|393240409|gb|EJD47935.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1128
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 179/418 (42%), Gaps = 98/418 (23%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFR--------NVLLNEDIPIHPDSKSQGQLV 52
M +G+ N GNTCY+N+ +QCLS T F +N P+ ++GQL
Sbjct: 763 MQVATSGLKNLGNTCYMNATIQCLSATVPFARFFTDGRWKTAVNMVNPL----GTKGQLA 818
Query: 53 DALVNFMKMMWSSGNLVLNTK-AILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV 111
A + MW G+L + A + ++ +F+ ++Q D QEFL LL L+E+
Sbjct: 819 SAFATLLHEMWH-GDLPYRSPYAFRKTVCAFATQFNNSEQHDCQEFLSALLDGLHEDLNR 877
Query: 112 VPDQYNGSTYSN------TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN 165
+ + N T T + Q+ S + W+ +Q + S+ D F GQ R+
Sbjct: 878 IIAKPNVETTPEREAELETLAVQIASEQE---WQIYQMRDDSLIVDYFQGQFRNR----- 929
Query: 166 CKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG 225
V+C C +TST Y F LSLP+P G
Sbjct: 930 ---------------------------------VQCLTCHKTSTTYNSFMYLSLPIPAGR 956
Query: 226 G----TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-- 275
G TL +CL+ F E + C CK + RLPPVL++ KRFS
Sbjct: 957 GVNKVTLNQCLDHFVREEVIDRENAWNCPNCKCPRRATTQLSLSRLPPVLLIHLKRFSVK 1016
Query: 276 SNFTQKVTSPIKFPREGLDMEYYIS--------------ASGRRVESR-----YTYDLCA 316
FT K+ + + FP+ GLD+ Y+ A R + R Y YDL A
Sbjct: 1017 GPFTDKLETVVDFPQRGLDLTNYMPPPLPPGTARPARAGAPLRTDDPRIQVPPYKYDLYA 1076
Query: 317 VSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
V+NH G T GHYTA GT W DD+ +S D Q++ + AY+L Y+R
Sbjct: 1077 VTNHYG-TLTGGHYTALIASRGT--WLHCDDSRISEADPQSLTTR-----AYVLFYRR 1126
>gi|431916120|gb|ELK16374.1| Ubiquitin carboxyl-terminal hydrolase 21 [Pteropus alecto]
Length = 593
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 182/402 (45%), Gaps = 59/402 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N +
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEVNRRGRRAAPLLA 329
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCS--- 164
GS + + ++ G+ RA W+++ E S VG R+ R S
Sbjct: 330 GSP-APSPPRRAGARPAEPELSDDDRANLMWKRYLEREDSKI----VGMERARQRGSRGT 384
Query: 165 --NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP 222
C R + P G L+ QL+S ++C C ST +E+F +LSLP+P
Sbjct: 385 LTGCGRKTGRC-----------PRGRDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIP 433
Query: 223 P---GGG--TLYECLNKFFNGETLH----NTCQYCKKQSDLVKLYEIQRLPPVLILWFKR 273
GG +L +C + F E L C C++++ K +QR P +L+L R
Sbjct: 434 KKGFAGGKVSLRDCFSLFTKEEELELENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNR 493
Query: 274 FSSNF--TQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYT 331
FS++ +K + + FP + L + + S Y L A+ NH G + GHYT
Sbjct: 494 FSASRGSIKKSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHCGHYT 548
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
A CR + TG W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 549 ALCRCQ-TG-WHVYNDSRVSPVSENQVASSE----GYVLFYQ 584
>gi|118399164|ref|XP_001031908.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89286243|gb|EAR84245.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 680
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 181/408 (44%), Gaps = 73/408 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDS--KSQGQLVDALVNFM 59
GL G++N GNTC++NS LQCLSN P + L++ + I+ DS SQG++ M
Sbjct: 82 GLVGLSNLGNTCFMNSALQCLSNVPPLCDYFLSKLHEKEINYDSFLGSQGKITQQFAELM 141
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD----- 114
MW++ + + + L A+ ++ +F QQD+ EFL +L+ L+E +++
Sbjct: 142 IDMWNTSDSYIIPQKFLRAIGNFGPQFADGSQQDSHEFLAFLMDILHEVSQLTNQLQQNK 201
Query: 115 ----------------------QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDI 152
YNG+ Y A W+++ S+ D+
Sbjct: 202 QNFFEIYKDLNRVKQKPYIEGKDYNGNDYEKY---------AKECWKEYLMRNRSIIVDL 252
Query: 153 FVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYE 212
F GQ +S++RC C S +E F LS+P+P + +
Sbjct: 253 FQGQTKSTLRCLKCNTVSHKFETFMYLSVPIPD---------------------SQKSKK 291
Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLI 268
+ + S+ +L C+ +F E L C CKK + K ++ ++P +LI
Sbjct: 292 LSSKRSIEEDSESFSLQRCIQEFTKEEKLERGELWFCPKCKKHQESTKKIDLWKMPNILI 351
Query: 269 LWFKRFSSNFTQ--KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
+ KRF N + K+++ I FP + D+ + R + YDL AVSNH G T
Sbjct: 352 IHLKRFEFNKDRRCKLSNKIDFPIKNFDISSLTAGKQRDIP---IYDLFAVSNH-GGTLS 407
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT+Y + WY ++DT V V + E + +Y+L Y +
Sbjct: 408 SGHYTSYAKNRIDQNWYFFNDTQVQYV--EDPEDKLSSSQSYVLFYSK 453
>gi|119573028|gb|EAW52643.1| ubiquitin specific peptidase 21, isoform CRA_b [Homo sapiens]
Length = 551
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 171/393 (43%), Gaps = 83/393 (21%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
+C N F E L + C C++++ K +QR P +L L RFS++ +
Sbjct: 418 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSASRGSIK 474
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S A S H YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDK-------------AGSVH------YGHYTALCRCQ-TG 514
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 515 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 542
>gi|302686404|ref|XP_003032882.1| hypothetical protein SCHCODRAFT_32018 [Schizophyllum commune H4-8]
gi|300106576|gb|EFI97979.1| hypothetical protein SCHCODRAFT_32018, partial [Schizophyllum
commune H4-8]
Length = 300
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 153/335 (45%), Gaps = 57/335 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAF----RNVLLNEDIPIHPDSKSQGQLVDALVNFM 59
G++G+ N GNTCY N+ LQCLS T F ++ I +H S+G L A +
Sbjct: 1 GVSGLKNLGNTCYANAPLQCLSATIPFAQFFKDTRWKNAINMHNTMGSKGVLSAAFAALV 60
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
MWSS + ++ ++ + A+R+ +++ G+ Q D+QEFL +LL ++E+ + + N
Sbjct: 61 HQMWSSESQLIPSE-FMRAIRAINEQYKGSDQHDSQEFLSFLLDGIHEDLNRILKREN-- 117
Query: 120 TYSNTSSKQVGSFR------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
Y+ T ++ R + W+ ++ S+ D F GQLR+ V+C C +TST Y
Sbjct: 118 -YTRTPEQEAELERLPPQIASEQEWQAWRLRNDSIIVDYFQGQLRNQVKCLTCGQTSTTY 176
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
F LSLPVP G L +CL+
Sbjct: 177 NTFSILSLPVPHARAG----------------------------------GKAHLKQCLD 202
Query: 234 KFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIK 287
FFN ETL C CK + K + RLPPVL++ KRF ++ F+ K+ + +
Sbjct: 203 AFFNSETLEKDDAWDCPRCKTKRSASKSLMLARLPPVLVIHLKRFEAHGRFSDKIDTFVD 262
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIG 322
FP G R Y YDL V+NH G
Sbjct: 263 FPLNGASTS---PEDPRTQLPPYKYDLYGVTNHFG 294
>gi|326427127|gb|EGD72697.1| hypothetical protein PTSG_04426 [Salpingoeca sp. ATCC 50818]
Length = 1574
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 165/383 (43%), Gaps = 63/383 (16%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNF 58
P G+ N GNTCY+N+VLQCL++T + + H + +S+ G++ + L
Sbjct: 1237 PISTGLKNLGNTCYMNAVLQCLAHTKQLATYFVQKRYRNHLNRRSKFGCKGEVAEELAEL 1296
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ S L+ SY +F G QQD QEF LL L+E+ V
Sbjct: 1297 LTVLTSRQYRHLSPSMFKEVFASYCPQFAGYDQQDCQEFASMLLDKLHEDLNRVVAKPPA 1356
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
S + + G+ W++ + S+ +D+F GQ
Sbjct: 1357 KDLDLSGMDAVRAGN----EAWKQCIARDNSIITDLFQGQF------------------- 1393
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKF 235
RS RC+ C+ S Y F LSLPVPP G +L+ C+ F
Sbjct: 1394 -------------------RSVTRCNTCRYESATYSPFTSLSLPVPPHGRYSLHHCIRLF 1434
Query: 236 FNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFP 289
E + C CK D +K I RLP L++ KRF N F K+ + I FP
Sbjct: 1435 SRQENMTGNNQWKCPKCKAYRDAIKFMGIWRLPRCLLIHLKRFYFNGPFRDKINTMIDFP 1494
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
+ L + S R E R Y L AV+NH G T GHY A+ + GRW YDD+V
Sbjct: 1495 -QNLQLGKDDVMSFSRPEQRENYSLYAVANHYG-TLTGGHYIAFAKH--AGRWEKYDDSV 1550
Query: 350 VSPVDAQTVESAEAEHGAYILVY 372
VSP+ Q V + AY+L Y
Sbjct: 1551 VSPMAPQQVVTP----AAYVLFY 1569
>gi|347965036|ref|XP_001231055.3| AGAP001052-PA [Anopheles gambiae str. PEST]
gi|333469366|gb|EAU76649.3| AGAP001052-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 169/381 (44%), Gaps = 62/381 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NS++QCLS+T + L + SK L + +K MW
Sbjct: 10 GLCGLWNIGNTCFMNSMIQCLSHTRELTSFLRGQSSSERGTSKDHLILAE-YTKLIKNMW 68
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL----AALNEEAKVVPDQYNGS 119
S +N + A S + + G+ QQDAQEFL + L ALN K P
Sbjct: 69 SGTQRSINPSDLKYAFSSKHRMYSGSAQQDAQEFLRFFLDSLHGALNAAIKRDP------ 122
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
S +A WE + E S+ D+FVGQLRS+++C+ C ST+++ FW+L
Sbjct: 123 -LSEIDDNMNNKDKADMLWEWYSKAENSMIKDLFVGQLRSTLKCTFCNMESTMFDPFWDL 181
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SLP+ SS RC L CL F E
Sbjct: 182 SLPL-----------PSSSSRCK-------------------------LENCLEMFIKEE 205
Query: 240 TLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPRE--GL 293
+ TC C + K I+R P L++ KRFS K+T+ ++FP + L
Sbjct: 206 IMDGIDQPTCSNCDTRRKCTKRLTIERFPRYLVIHLKRFSEARWSKLTNIVEFPTKNRAL 265
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+++ Y S + Y L +SNH+G TA GHY A C+ T +W ++D V+
Sbjct: 266 NLQPYASED---ISGPIYYSLYGISNHMGSTA-GGHYVAVCKHPQTQQWNEFNDNYVT-- 319
Query: 354 DAQTVESAEAEHGAYILVYQR 374
+ E AY+L Y+R
Sbjct: 320 --EAFERNLVTSNAYVLFYER 338
>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
Length = 528
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 171/390 (43%), Gaps = 66/390 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDS--KSQGQLVDALVNFM 59
G G++N GNTC++NS +QCLSNT + L D I+ D+ S+G L + +
Sbjct: 105 GRVGLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRSEINHDNFLGSKGALASSYAEVV 164
Query: 60 KMMW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ-YN 117
K +W G + +L + +FDG+QQ DAQE L YLL ++E+ V + Y
Sbjct: 165 KHLWLGQGAQHYSPGRFKSSLAKFAPQFDGSQQHDAQELLAYLLDGMHEDLNRVKSKPYI 224
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ S+ V + A W + + S+ D+F GQLRS + CS C + S ++ F
Sbjct: 225 EDDDCDGSNDDVDAIAA---WSNYLRRDQSIVVDLFQGQLRSRMTCSVCGKVSVKFDSFM 281
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
LSLPV ++C+ TL +CL F
Sbjct: 282 YLSLPV-----------------TADCR---------------------TLDDCLGLFCE 303
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPR 290
E L C CK D K ++ LPP+LI+ KRF S K+ I +P
Sbjct: 304 EEYLSGDDAWYCPRCKCHVDAAKKMDLFMLPPILIVHLKRFEFSESGRRSKIERDISYPL 363
Query: 291 EGLDMEYYISASGRRVES--RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD- 347
D+ +S ++ E R YDL A +H G TA GHYTA GRWY ++D
Sbjct: 364 SEWDL-----SSSKKGEGGLRPVYDLYAACHHSG-TAGGGHYTATAVNRFDGRWYRFNDS 417
Query: 348 ---TVVSPVDAQTVESAEAEHGAYILVYQR 374
+V VD + E AY L Y R
Sbjct: 418 SCRSVDVDVDGDGMVRGEGRRTAYCLFYNR 447
>gi|167525557|ref|XP_001747113.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774408|gb|EDQ88037.1| predicted protein [Monosiga brevicollis MX1]
Length = 344
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 170/385 (44%), Gaps = 69/385 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-----IPIHPDS-KSQGQLVDALVN 57
G +G+ N GNTC+ N++LQCLS+ V NE + H + S G + A
Sbjct: 7 GKSGLVNIGNTCFFNAILQCLSHIRPLGEVFGNEAKLSSLLNTHSKALGSHGLIAQAYGR 66
Query: 58 FMKMMWSSGNLV-LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
++ +W + + A+ ++F G QQDA EFL +LL L+E+ V
Sbjct: 67 LLRDLWQPARMTPVRPADFKRAISRRNRRFMGYDQQDAPEFLEFLLDELHEDVNRV---- 122
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
K + RA W F + S D+F GQLRS V C C + S +++ F
Sbjct: 123 --------GEKPYAADRA---WANFHRRDDSPVVDLFQGQLRSRVCCPTCSKVSVIFDPF 171
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
L+LP+P R C+ + ++ V G T YE L K
Sbjct: 172 RSLALPLP-----------RPRTPCTGQEASAAV-------------GLHTAYELLAK-- 205
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ----KVTSPIKF 288
E L + C CK+ +K + RLPP+L++ FKRF+ ++ T+ I +
Sbjct: 206 -PEVLSHDNQWYCNRCKEHRQAIKELAVWRLPPILVVHFKRFAHGASRLRVTSATTQITY 264
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P E L ++ ASG+ + Y L V H G T YGHY AY R TG WY YDD
Sbjct: 265 P-ERLHLD---DASGQGRD----YRLRGVVCHRG-TLYYGHYVAYARHAVTGDWYYYDDD 315
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQ 373
V + +S GAY+L Y+
Sbjct: 316 TCRRV---SDDSYLGHRGAYLLFYE 337
>gi|347965034|ref|XP_003437189.1| AGAP001052-PB [Anopheles gambiae str. PEST]
gi|333469367|gb|EGK97273.1| AGAP001052-PB [Anopheles gambiae str. PEST]
Length = 533
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 169/381 (44%), Gaps = 62/381 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NS++QCLS+T + L + SK L + +K MW
Sbjct: 204 GLCGLWNIGNTCFMNSMIQCLSHTRELTSFLRGQSSSERGTSKDHLILAE-YTKLIKNMW 262
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL----AALNEEAKVVPDQYNGS 119
S +N + A S + + G+ QQDAQEFL + L ALN K P
Sbjct: 263 SGTQRSINPSDLKYAFSSKHRMYSGSAQQDAQEFLRFFLDSLHGALNAAIKRDP------ 316
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
S +A WE + E S+ D+FVGQLRS+++C+ C ST+++ FW+L
Sbjct: 317 -LSEIDDNMNNKDKADMLWEWYSKAENSMIKDLFVGQLRSTLKCTFCNMESTMFDPFWDL 375
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SLP+ SS RC L CL F E
Sbjct: 376 SLPL-----------PSSSSRCK-------------------------LENCLEMFIKEE 399
Query: 240 TLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPRE--GL 293
+ TC C + K I+R P L++ KRFS K+T+ ++FP + L
Sbjct: 400 IMDGIDQPTCSNCDTRRKCTKRLTIERFPRYLVIHLKRFSEARWSKLTNIVEFPTKNRAL 459
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+++ Y S + Y L +SNH+G TA GHY A C+ T +W ++D V+
Sbjct: 460 NLQPYASED---ISGPIYYSLYGISNHMGSTA-GGHYVAVCKHPQTQQWNEFNDNYVT-- 513
Query: 354 DAQTVESAEAEHGAYILVYQR 374
+ E AY+L Y+R
Sbjct: 514 --EAFERNLVTSNAYVLFYER 532
>gi|347965032|ref|XP_003437188.1| AGAP001052-PC [Anopheles gambiae str. PEST]
gi|333469368|gb|EGK97274.1| AGAP001052-PC [Anopheles gambiae str. PEST]
Length = 724
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 169/381 (44%), Gaps = 62/381 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NS++QCLS+T + L + SK L + +K MW
Sbjct: 395 GLCGLWNIGNTCFMNSMIQCLSHTRELTSFLRGQSSSERGTSKDHLILAE-YTKLIKNMW 453
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL----AALNEEAKVVPDQYNGS 119
S +N + A S + + G+ QQDAQEFL + L ALN K P
Sbjct: 454 SGTQRSINPSDLKYAFSSKHRMYSGSAQQDAQEFLRFFLDSLHGALNAAIKRDP------ 507
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
S +A WE + E S+ D+FVGQLRS+++C+ C ST+++ FW+L
Sbjct: 508 -LSEIDDNMNNKDKADMLWEWYSKAENSMIKDLFVGQLRSTLKCTFCNMESTMFDPFWDL 566
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SLP+ SS RC L CL F E
Sbjct: 567 SLPL-----------PSSSSRCK-------------------------LENCLEMFIKEE 590
Query: 240 TLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPRE--GL 293
+ TC C + K I+R P L++ KRFS K+T+ ++FP + L
Sbjct: 591 IMDGIDQPTCSNCDTRRKCTKRLTIERFPRYLVIHLKRFSEARWSKLTNIVEFPTKNRAL 650
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+++ Y S + Y L +SNH+G TA GHY A C+ T +W ++D V+
Sbjct: 651 NLQPYASED---ISGPIYYSLYGISNHMGSTA-GGHYVAVCKHPQTQQWNEFNDNYVT-- 704
Query: 354 DAQTVESAEAEHGAYILVYQR 374
+ E AY+L Y+R
Sbjct: 705 --EAFERNLVTSNAYVLFYER 723
>gi|403414636|emb|CCM01336.1| predicted protein [Fibroporia radiculosa]
Length = 1176
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 169/403 (41%), Gaps = 77/403 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
G +G+ N GNTCY+NS +QCLS T F + + + ++G L A N +
Sbjct: 816 GTSGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKSAVNMMNPMGTKGNLAHAFANIL 875
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV--PDQYN 117
+ MW L+ +L Y +F G +Q D+QEFL +LL L+E+ V Q +
Sbjct: 876 RDMWQGELQCLSPVTFRRSLCQYAPQFGGTEQHDSQEFLNFLLDGLHEDLNRVLQKPQID 935
Query: 118 GSTYSNTSSKQVGS-FRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+ +++ + + W+ ++ S+ D F GQ R+ +
Sbjct: 936 STPEREAELERLPTQIASEQEWQIWRMRNDSLVVDFFQGQFRNRLE-------------- 981
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG----TLYECL 232
C C +TST Y F L+LP+P +L CL
Sbjct: 982 ------------------------CLTCHKTSTTYNTFMYLTLPIPTSRSLSKVSLSHCL 1017
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS--NFTQKVTSPI 286
+ F E + + C +CK K + RLPPVL++ KRFSS +FT K+ + +
Sbjct: 1018 DAFVKEEVMEKSDAWNCPHCKTLRKATKNLSLSRLPPVLLIHLKRFSSKGHFTDKIETFV 1077
Query: 287 KFPREGLDMEYYISA---------------SGRRVESRYTYDLCAVSNHIGKTALYGHYT 331
+P GLD+ Y+ R Y YDL V+NH G T GHYT
Sbjct: 1078 DYPLRGLDLTNYMPPPLPPGVNAGPQMPRDDPRAQIPPYRYDLYGVTNHFG-TLSSGHYT 1136
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
A+ G W DD+ +S D + V AY+L Y+R
Sbjct: 1137 AFISSRGG--WLYCDDSRISQADPKDV----VGKPAYMLFYKR 1173
>gi|156370210|ref|XP_001628364.1| predicted protein [Nematostella vectensis]
gi|156215339|gb|EDO36301.1| predicted protein [Nematostella vectensis]
Length = 409
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 171/380 (45%), Gaps = 82/380 (21%)
Query: 10 NAGNTCYINSVLQCLSNTP---------AFRNVLLNEDIPIHPDSKSQGQLVD----ALV 56
N GNTCY+NSVLQCL NT AFR+ +N++ P+ + G +D +
Sbjct: 84 NLGNTCYMNSVLQCLFNTAPLAAYFVSGAFRDD-INKENPL----GTSGMYLDFYFITSI 138
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQ 115
NF + SS + F+G QQD QEFL ++ L+E+ ++
Sbjct: 139 NFSFYLTSSP--------------EFFTTFEGVCQQDFQEFLALMMDKLHEDVCQIRHKP 184
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
Y + N + + W+ + S+ ++F G +S+VRC C + S YE
Sbjct: 185 YLKAPDDNIDPAEAANIT----WDNHRKRNESLMLNLFDGMFKSTVRCLVCAKDSVTYET 240
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRC-SNCKRTSTVYEIFWELSLPVPPGGGTLYECLNK 234
F L+LP+P G C LR ++ + +R S G Y
Sbjct: 241 FSNLTLPLP---GNSNHCSLRDCIKLFTRAERMS---------------GDDMWY----- 277
Query: 235 FFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
C CK+ K +I RLPP+LI+ KRF + + QK+ + + FP +G
Sbjct: 278 ----------CPRCKQHRVASKQLQIWRLPPILIVHLKRFQYDGMWRQKLQTAVSFPVDG 327
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LDM YI+ +R Y L VSNH G T GHYTA+C+ RW+ +DD VV+
Sbjct: 328 LDMSGYITGPTKRP----AYHLYGVSNHYG-TMHGGHYTAFCKNAHNQRWFKFDDQVVTE 382
Query: 353 VDAQTVESAEAEHGAYILVY 372
+ A + S+ AY+L Y
Sbjct: 383 MSANDIVSS----AAYLLFY 398
>gi|195426425|ref|XP_002061335.1| GK20778 [Drosophila willistoni]
gi|194157420|gb|EDW72321.1| GK20778 [Drosophila willistoni]
Length = 917
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 193/446 (43%), Gaps = 82/446 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIH--PDSKSQGQLVDALVNFMK 60
GL G+ N NTCY+NS LQ LSN + +N D+ H S S+ + V N+ +
Sbjct: 74 GLVGLQNLANTCYMNSALQALSNLNPMTHYFINCGDLVEHIADQSSSRCKPVGLAKNYQR 133
Query: 61 MM---W---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNE------- 107
+M W + + IL +RS F G QQ D QEFL + L+E
Sbjct: 134 LMQDIWLNIDDPKEFIAPRGILYGIRSVHPMFRGYQQHDTQEFLRCFMDQLHEELTEQIQ 193
Query: 108 ------EAKVVPDQYNGSTYSNT---------------SSKQVGSFRALHYWEKFQ---- 142
E K ++ +G S T SS S L E F
Sbjct: 194 QHQLKTEEKSDANEEDGDHVSATLHTPTASESEYDTCESSMSETSGEVLMKTEYFMAPKI 253
Query: 143 ---------------------TTEAS--VFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
T E+S + SD+F G+L SSV+C C R ST E F +L
Sbjct: 254 RSHKNSTSQSMPPAAAAAASPTVESSRSIISDVFDGKLLSSVQCLTCDRISTREETFQDL 313
Query: 180 SLPVPPGGGTLYECQLRS-SVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLYECLNKF 235
SLP+P Q S SV+ N + + I W L G TLY+C+ F
Sbjct: 314 SLPIPTRDFLNVLHQTHSLSVQSLNATDANEGW-ISWMWGLLRSWLYGPSVTLYDCMASF 372
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFP 289
F+ + L +C+ C K +K + LP VL + KRF + ++ K++S + FP
Sbjct: 373 FSADELKGDNMYSCEKCNKLRTGIKYSRVLNLPEVLCIHLKRFRHDLSYSSKISSHVYFP 432
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
EG DM Y+ + + Y+Y+L +V H G T GHYT Y R GRWY +DD
Sbjct: 433 LEGFDMHPYVDKNCQ--SQVYSYNLSSVICHHG-TVGGGHYTCYARNSLNGRWYEFDDQF 489
Query: 350 VSPVDAQTVESAEAEHGAYILVYQRR 375
V+ V + V++ + AY+L YQ+
Sbjct: 490 VTEVLPEVVQNCQ----AYVLFYQKH 511
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 174/397 (43%), Gaps = 60/397 (15%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHP------------DSKSQ 48
++ G G+ N GNTC++N++LQ LSN F +++P ++SQ
Sbjct: 155 IAVGATGLRNLGNTCFMNAILQSLSNIEQFSCYF--KELPAVSLRSGKTAGRRMYHTRSQ 212
Query: 49 GQ----LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA 104
G LV+ + +W + ++ + F G QQQDA EF+ YLL
Sbjct: 213 GDSSVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGYQQQDAHEFMRYLLDH 272
Query: 105 LNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
L+ E QY + S+ +S Q G + + ASV + IF G L++ V C
Sbjct: 273 LHREL-----QYGRNGASHAASPQDGVRLSAADGKCCINGTASVVTSIFGGILQNEVNCL 327
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
C S ++ F +LSL +P Q R KR+ P
Sbjct: 328 ICGTESRKFDPFLDLSLDIPS--------QFRQ-------KRSKD----------QEPGP 362
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNF 278
TL +CL F + E L T C CKK+ K + +Q+LP VL L KRF ++
Sbjct: 363 TCTLSDCLRSFTDLEELDETELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFL 422
Query: 279 TQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
K+ + ++FP +GLDM Y+ + YDL AV H G GHYTAY EG
Sbjct: 423 RNKIDTYVEFPLKGLDMRGYLLEPENSLPESCVYDLVAVVVHHGSGVGSGHYTAYGSHEG 482
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
WY ++D+ V+ + V A+ AYIL Y R
Sbjct: 483 C--WYHFNDSTVTLTNEDAVRKAK----AYILFYVER 513
>gi|428179085|gb|EKX47957.1| hypothetical protein GUITHDRAFT_106044 [Guillardia theta CCMP2712]
Length = 353
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 166/350 (47%), Gaps = 51/350 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQG-QLVDALVNFMKMM 62
L G++N GNTC++NSVLQCL NT + ++ + S+ QLVD + K M
Sbjct: 10 ALVGLSNLGNTCFMNSVLQCLVNTAPLSAYFVADEYSGELNRSSKSWQLVDDYASLAKDM 69
Query: 63 W-SSGNL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
W ++GN +N A+ + + + ++F G +Q D+QE L +LL L +E + P +
Sbjct: 70 WRTAGNTHTSINPSALKMQISRWARQFSGYEQHDSQELLRFLLDGL-QEGLMRPKREPPW 128
Query: 120 TYSNTS-SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
Y + K+ + ++ WE + S +DIF GQLRS V C+ CKR S Y+ F +
Sbjct: 129 PYDDKDFEKRAIAEQSRRMWENYLARNNSQITDIFCGQLRSRVTCATCKRESNCYDPFMD 188
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P L + RSS + CK L +CL +F +
Sbjct: 189 LSLPIPKKFQGL--SKWRSSAQ--ECK----------------------LQDCLEQFVDE 222
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L C CKK +K +I R P VL+L KRF S+ K+ + ++FP
Sbjct: 223 EKLEGNEMYYCSRCKKHQVAIKEMKIFRCPLVLVLHLKRFDKRSSSRSKLNASVRFPTAS 282
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
L++ Y+S+ + S T+D LYG + Y E GR+
Sbjct: 283 LELAPYMSSDSPDL-STSTFD------------LYGETSLYENEEDDGRF 319
>gi|224010108|ref|XP_002294012.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970684|gb|EED89021.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1472
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 172/398 (43%), Gaps = 74/398 (18%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVD 53
+PG G+ N GN+CY+NS+LQC+++ P+ L N++ P+ S G++
Sbjct: 1090 APGSVGLHNLGNSCYMNSILQCINHIPSITQYFLKGEYQKEVNKNNPL----GSGGKVAT 1145
Query: 54 ALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP 113
A +F+ +W+ +L + + + Y +F+ N Q D+QEF YL+ L+E+ V
Sbjct: 1146 AYASFLNDIWTGEYSILAPRLLKQIVGCYAPQFNNNYQHDSQEFHQYLMDGLHEDLNRVK 1205
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
D+ K A+ W+K S+F D G
Sbjct: 1206 DKPYVEDVEALGMKD--DRAAIESWKKHLLRHDSLFVDYTQG------------------ 1245
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG----TLY 229
L+ RS + C +C + S ++++ +SLP+ P L
Sbjct: 1246 ----------------LH----RSHLTCPSCGKESIKFDVYSSISLPLVPSKNRPSIPLE 1285
Query: 230 ECLNKFFNGETL--HNT--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN-------- 277
+CL++F GE L HN C CKK +KL + P VL+L KRF+
Sbjct: 1286 DCLDQFAAGEQLDEHNAWYCSGCKKHVCALKLITLWNTPDVLVLHLKRFTYEKCSQVDGR 1345
Query: 278 -FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRR 336
K+ + FP + LD+ Y+ + ++ Y L VS H G TA GHYTA R
Sbjct: 1346 IIRSKIEDKVDFPIDRLDLTPYVLGP-KDPDAPPIYKLFGVSEHTGATANSGHYTATVRN 1404
Query: 337 EGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
G WY Y+D+ V T A GAY+L YQR
Sbjct: 1405 SKDGNWYRYNDSHV----GTTSGDAAVTGGAYLLFYQR 1438
>gi|396474876|ref|XP_003839649.1| hypothetical protein LEMA_P110890.1 [Leptosphaeria maculans JN3]
gi|312216219|emb|CBX96170.1| hypothetical protein LEMA_P110890.1 [Leptosphaeria maculans JN3]
Length = 1072
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 176/409 (43%), Gaps = 77/409 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N G TCY+NSV+QCLS T + ++ L + D+ ++G L +A + +
Sbjct: 691 GLLNFGVTCYMNSVVQCLSGTLSLSDLFLTQRYQRDLQRDNWKGTKGILPEAYATLLSNL 750
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
+ + + ++ ++QQDA+EFL ++L ++E+ + +N S
Sbjct: 751 YKGDVGSVRPSTFRRICGHFNSQWGVDEQQDAKEFLEFVLDYMHEDLNIT---WNKSPLK 807
Query: 123 NTSSKQ-------VGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
S +Q + A W ++Q + SV IF GQ S + C C TST YE
Sbjct: 808 PLSDQQELQREQFPRQYAAKIEWGRYQHRDMSVIGGIFAGQHASQLTCQTCGVTSTTYEA 867
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
FW +S+ +P G +C +R +R S C + W
Sbjct: 868 FWSISVEIPREG----QCDVRDCLR-SYCAPERLAGDELWR------------------- 903
Query: 236 FNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREG 292
C CKK + VK I R P L++ FKRFS++ T+ KV +P+ FP +G
Sbjct: 904 ---------CPRCKKDREAVKKITITRAPETLVIHFKRFSASRTESARKVRTPVHFPLQG 954
Query: 293 LDM------------EYYISASGRR-------------VESRYTYDLCAVSNHIGKTALY 327
LDM E YI+ + R + Y Y+ AV HIG T
Sbjct: 955 LDMAPFVEPPMTPTQEAYITQNARDGPAQLASVKADPTMNGPYIYNAYAVIWHIGATLGS 1014
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTV--ESAEAEHGAYILVYQR 374
GHYTA+ + + G W ++D ++ D + S AYI+ Y+R
Sbjct: 1015 GHYTAFVKDKSRGSWRSFNDDKITDFDPGNLPPHSRLQNEKAYIVFYER 1063
>gi|340508522|gb|EGR34211.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 547
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 170/387 (43%), Gaps = 65/387 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDS--KSQGQLVDALVNFM 59
GL G+ N GNTCYIN+ LQCLSNTP + L++ + I+P++ S GQ+ +
Sbjct: 79 GLVGLYNLGNTCYINAALQCLSNTPPLCDYFLSQLHEKEINPNAFLGSNGQITSQFGKLI 138
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-AKVVPDQYNG 118
+W + + + + + ++F QQD+ EFL +LL L+E+ +V+ Y
Sbjct: 139 LDLWQTDQNFIEPIDFINEIGQFAEQFADGTQQDSHEFLAFLLDILHEDLNRVIKKPYIK 198
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
N + S + W+++ S+ D+F GQ +
Sbjct: 199 EKDYNCEKHEEYSKES---WKEYLMRNKSIIVDLFQGQTK-------------------- 235
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-----TLYECLN 233
S+++C C S +E F LS+PVP L EC+
Sbjct: 236 ------------------STLKCLVCGSVSHKFEAFQFLSVPVPANKSHNEIINLSECIQ 277
Query: 234 KFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIK 287
+F E L C CKK K ++ +LP +LI+ KRF N K+ + +
Sbjct: 278 EFTKEEYLDQNEWWYCFKCKKNRKSTKQIDLWKLPNILIIHLKRFRFDKNIKAKIKNFVD 337
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP + D++ Y R + YDL A+SNH G + GHYTAY + WYL+DD
Sbjct: 338 FPIQNFDLQPYTIGRQR---DQPIYDLFAISNHEGNLS-SGHYTAYAKNRANQNWYLFDD 393
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQR 374
V + ++S + AY+L Y +
Sbjct: 394 CNVQQCLKEQIKSEK----AYVLFYSK 416
>gi|299744717|ref|XP_001831228.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
gi|298406256|gb|EAU90391.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
Length = 1108
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 167/413 (40%), Gaps = 93/413 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL----NEDIPIHPDSKSQGQLVDALVNFM 59
G +G+ N GNTCY+N+ +QCLS T F I SQG+LV A +
Sbjct: 744 GTSGLKNLGNTCYMNAPIQCLSATVPFARFFTEGRWKTAINYTNSLGSQGRLVQAFAKLV 803
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--------- 110
MW L ++ +++ G+ Q D+QEFL +LL ++E+
Sbjct: 804 HEMWGGDLPYLTPMDFRKSICQLNQQYIGSDQHDSQEFLSFLLDGVHEDLNRVMVKPKIV 863
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
V P+Q + S R W ++ S+ D F GQ
Sbjct: 864 VTPEQ---EAELERLPPMIASDRE---WRNWKARNDSIIVDFFQGQF------------- 904
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--- 227
RS ++C C++TST Y +F L +P+P +
Sbjct: 905 -------------------------RSRLQCLTCEKTSTTYNVFSILQVPIPNSRSSKVP 939
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
L CL+ FN E L C CK + K + RLPP+L++ KRF +N F+ K
Sbjct: 940 LQRCLDALFNEEVLEKDDAWDCPQCKTKRRASKTLSLARLPPILLIHLKRFEANGRFSDK 999
Query: 282 VTSPIKFPREGLDMEYYISA--------------------SGRRVESRYTYDLCAVSNHI 321
+ + ++FP + LD+ Y+ R Y YDL V+NH
Sbjct: 1000 IDTFVEFPMKSLDLTNYMPPPLPPGADKSEINGGVPMSLEDPRTQVPPYKYDLYGVTNHY 1059
Query: 322 GKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
G + GHYTAY G W L DD+ V P+D + V AY+L Y+R
Sbjct: 1060 GNLS-SGHYTAYIASRGG--WMLCDDSSVKPIDPRQV----VNQKAYVLFYKR 1105
>gi|444514644|gb|ELV10629.1| Putative ubiquitin carboxyl-terminal hydrolase 50 [Tupaia
chinensis]
Length = 373
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ + K ++ A M MW
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-MTALQKDCSEVATAFAYLMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + +F QQDAQEFL+Y+L L+E K + +Y
Sbjct: 101 LGDSDCVSPEIFRSALGNLYPEFMKKTQQDAQEFLIYVLNELHEALKTY---HRKRSYEK 157
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S++Q K +E S+ + +F GQLR + C
Sbjct: 158 RSTQQC--------CRKVIASETSIITQLFEGQLRYDIVC-------------------- 189
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
++C NC + V+ I LSLP+P +L +CL FF +TL
Sbjct: 190 ---------------LKCDNCAHKNEVFSI---LSLPIPSDYECSLQDCLQCFFQQDTLT 231
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
C C + I + P V+I KRF +K+ + I +P LD+
Sbjct: 232 WNNQMHCSLCDTMQETAVRASISKAPKVVIFHLKRFDIQGMTKRKLRTDIHYPLTNLDLT 291
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 292 PYICPVARK---HPKYSLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDS 347
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 348 SVQTA----TAYLLFY 359
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 186/403 (46%), Gaps = 87/403 (21%)
Query: 6 NGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP----------IHPDSKSQGQ---LV 52
+G+ N GNTC++N+VLQ LSN F + + +P I S ++G +V
Sbjct: 152 SGLRNLGNTCFMNAVLQSLSNIQTFCGYI--QQLPSLEQKMSKKKITTRSCTEGNDVFVV 209
Query: 53 DALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-AKV 111
+ L + +W ++ +++ + +F G QQQDA EF+ YLL L+ E +
Sbjct: 210 EELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTELMTL 269
Query: 112 VPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
+P YN + N S VGS ++SV + IF G L+S V C C S
Sbjct: 270 IP--YNATVRPN--SPYVGS----------PLGKSSVVTAIFGGILQSEVNCLICGMESK 315
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT---L 228
++ F ++SL +P + + C+ P P G L
Sbjct: 316 KHDPFLDISLDIP----SKFTCKT------------------------PNPKNGEIVCDL 347
Query: 229 YECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKV 282
+CL+ F + E L +T C CK + K + I+RLP VL L KRF S+ KV
Sbjct: 348 SDCLSSFTDVEELEDTELYMCANCKCRQRSTKKFWIRRLPNVLCLHLKRFRWSTYLRVKV 407
Query: 283 TSPIKFPREGLDMEYYI----------SASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
+ I FP GL+M +++ SASG S+ YDL AV H G A GHYT+
Sbjct: 408 DTHINFPLRGLEMNHFMLDNLHETRNSSASG----SQSKYDLAAVVVHHGSGAGSGHYTS 463
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
Y EG WY ++D+ V+ D +TV A+ AYIL Y RR
Sbjct: 464 YAVHEGG--WYHFNDSSVTQCDEETV----AKCKAYILFYVRR 500
>gi|354471307|ref|XP_003497884.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
carboxyl-terminal hydrolase 50-like [Cricetulus griseus]
Length = 450
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 163/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL N L+ I K ++ A M MW
Sbjct: 67 GVTGLRNLGNTCYMNAILQCLCNISPLVEYFLSGKY-ITALQKDCSEVTTAFAYLMTDMW 125
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + L AL S F QQDAQEFL+Y+L L+E K Y
Sbjct: 126 LGDSDCVSPEIFLSALGSLYPAFLKKTQQDAQEFLIYVLNELHEALK---KHCRRRAYER 182
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
SS++ K +E S+ + +F GQ
Sbjct: 183 RSSQKC--------CRKVMASETSIITRLFEGQ--------------------------- 207
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
L S+ C C+ + E+F LSLP+P +L +CL FF +TL
Sbjct: 208 -----------LNYSITCLKCENCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLT 256
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P +++ KRF + +K+ + I++P LD+
Sbjct: 257 WNNQIHCSFCEIKQETAVRATISKAPKIIVFHLKRFDIQGSVKRKLRTDIRYPLTNLDIT 316
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 317 PYICPVFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 372
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 373 SVQTA----TAYLLFY 384
>gi|67972114|dbj|BAE02399.1| unnamed protein product [Macaca fascicularis]
Length = 331
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 57/343 (16%)
Query: 17 INSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSGNLVLNT 72
+NS+LQCL N P F +DI +G++ + MK +W+ ++
Sbjct: 1 MNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKALWTGQYRYISP 60
Query: 73 KAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSF 132
K + + +F G QQD+QE LL+L+ L+E+ N Y +++ + F
Sbjct: 61 KDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NRKRYKEENNEHLDDF 117
Query: 133 RAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 191
+A H W+K + S+ +F GQ +
Sbjct: 118 KAAEHAWQKHKQLNESIIVALFQGQFK--------------------------------- 144
Query: 192 ECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETLHNT----CQ 246
S+V+C C + S +E F LSLP+ TL +CL F E L + C
Sbjct: 145 -----STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCS 199
Query: 247 YCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDMEYYISASGR 304
+C+ + D +K EI +LPPVL++ KRFS + QK+ + + FP E LD+ Y+
Sbjct: 200 HCRARRDSLKKIEIWKLPPVLLVHLKRFSYDDRWKQKLQTSVDFPLENLDLSQYVIGPKN 259
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 260 NLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 298
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 174/390 (44%), Gaps = 65/390 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHP------------DSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F +++P ++SQG
Sbjct: 164 GLRNLGNTCFMNAILQSLSNIQVFSCYF--KELPSVALRSGKTAGRRMYHTRSQGDSSVS 221
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + A+ + F G QQQDA EFL YLL L+ E +
Sbjct: 222 LVEEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGYQQQDAHEFLRYLLDHLHREMQ 281
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEK--FQTTEASVFSDIFVGQLRSSVRCSNCKR 168
NGS S V S H E F +++ + +F G L++ V C C
Sbjct: 282 ---GNKNGS-----PSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVYCLICGT 333
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
S ++ F +LSL +P Q R +T+ E P TL
Sbjct: 334 ESRKFDPFLDLSLDIPN--------QFRI--------KTTKDQE---------PGPTCTL 368
Query: 229 YECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKV 282
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 369 SDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKV 428
Query: 283 TSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
+ ++FP GLDM+ Y+ + R YDL AV H G GHYTAY R E G+W
Sbjct: 429 DTYVEFPMCGLDMKSYLLEPENSLPERCLYDLAAVVVHHGSGIGSGHYTAYGRHE--GQW 486
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
Y ++D+ V+ V + V A+ AYIL Y
Sbjct: 487 YHFNDSTVTLVSEEAVLKAK----AYILFY 512
>gi|297296433|ref|XP_001107612.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Macaca mulatta]
gi|75076336|sp|Q4R6D3.1|UBP50_MACFA RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 50;
AltName: Full=Deubiquitinating enzyme 50; AltName:
Full=Ubiquitin thioesterase 50; AltName:
Full=Ubiquitin-specific-processing protease 50
gi|67969991|dbj|BAE01342.1| unnamed protein product [Macaca fascicularis]
Length = 373
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 172/379 (45%), Gaps = 65/379 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCL-SNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
S G+ G+ N GNTCY+N++LQCL S +P L + I + S+ + A M
Sbjct: 40 SQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDCSE--VATAFAYLMT 97
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
MW + ++ + AL + F QQDAQEFL+Y+L L+E K +Y+
Sbjct: 98 DMWLGDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALK----KYH--- 150
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
Y S + GS A K+ TTE SV + +F GQ
Sbjct: 151 YPRRRSHEKGS--AQRCCRKWITTETSVITQLFEGQ------------------------ 184
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGE 239
L S+ C C++ + E+F LSLP+P +L +CL FF +
Sbjct: 185 --------------LNYSIVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQD 230
Query: 240 TL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGL 293
TL C +C+ + + I + P ++I KRF T +K+ + I +P L
Sbjct: 231 TLTWNNQIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNL 290
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
D+ YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 291 DLTPYICPIFRKYPK---YNLCAVVNHFGDLDG-GHYTAFCKNSFTQAWYSFDDTRVSEI 346
Query: 354 DAQTVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 347 PDTSVQNA----TAYLLFY 361
>gi|325187626|emb|CCA22162.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 447
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 180/403 (44%), Gaps = 50/403 (12%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC + QCLS+ D +S +GQ+V + + M+ +W
Sbjct: 57 GLVGLENIGNTCCV----QCLSHLQVLMRYFDTNDR--MEESAGRGQVVVSFHSLMQKLW 110
Query: 64 SSGNLV--LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV--PDQYNG- 118
S+ + K ++ L+ +F G++Q DAQEFL +LL +L++E V P +Y
Sbjct: 111 SNAKSIEPYELKRVISRLQP---QFQGHEQHDAQEFLRFLLDSLHDELNRVQDPPKYREI 167
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T +N + ++V YW S FSD F GQL S V+C +C S ++ FW+
Sbjct: 168 KTNTNANDREVSD----GYWGYHLERNQSFFSDTFCGQLGSEVKCQSCLHRSLCFDTFWD 223
Query: 179 LSLPVPPGGGTLYEC--QLRS-----------SVRCSNCKRTSTVYEIFWELSLPVPPGG 225
+SL P + LR+ S+ N ++ + + V P
Sbjct: 224 ISLSFPLMRKIKHPILSPLRAVFQSRVNVPNLSMESRNGSKSIPSSPKAFGFTRTVSPTR 283
Query: 226 G-------TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF 274
+L ECL F E L + C C+K K RLP +L++ KRF
Sbjct: 284 NSLEERSISLIECLELFTASELLEESNGFYCSKCRKNGSTWKTIVFYRLPEILVIHLKRF 343
Query: 275 --SSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
+ +K I+FP E LD+E + ASG ++ YDL V H G T GHYTA
Sbjct: 344 EVKAAHCKKNMRNIEFPVESLDLERFC-ASGAVLDGGTKYDLMGVVLHDG-TLNDGHYTA 401
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
C WY ++D VS + + SA YIL YQRR
Sbjct: 402 ECLHGVKKAWYSFNDACVSSIAKPSNNSA----SPYILFYQRR 440
>gi|395535365|ref|XP_003769697.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Sarcophilus
harrisii]
Length = 535
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 163/368 (44%), Gaps = 64/368 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
G G+ N GNTC++N+VLQCLS+T R+ L D + ++ +L +A + +
Sbjct: 208 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAHQELTEAFADVLGA 267
Query: 62 MWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQY 116
+W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 268 LWHPDSCEAVNPTRFRTVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL 327
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
T + + ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 328 -ADTPAPSLPRRGGALLEEPELSDDERANLMWKRYLDREDSKIVDLFVGQLKSCLKCQAC 386
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 387 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 416
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
+C + F E L + C C++++ K +QR P +L+L RFS++ +
Sbjct: 417 ---DCFSLFTKEEELESENAPVCDRCRQRTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 473
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K + + FP + L + + S Y L A+ NH G + YGHYTA CR G
Sbjct: 474 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCR--GQT 526
Query: 341 RWYLYDDT 348
W++Y+D+
Sbjct: 527 GWHVYNDS 534
>gi|353240766|emb|CCA72619.1| related to Ubiquitin carboxyl-terminal hydrolase 4 [Piriformospora
indica DSM 11827]
Length = 1027
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 177/430 (41%), Gaps = 107/430 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
G++G+ N GNTCY+NSVLQCLS T F ++ + + ++G+L + +
Sbjct: 644 GMSGLKNLGNTCYMNSVLQCLSATAPFARFFIDGRWRNAVNMLNPLGTKGKLTEGYARLL 703
Query: 60 KMMWSS-------------GNLVLNTKAILLALR----SYTKKFDGNQQQDAQEFLLYLL 102
MW + G+ + + + L+ +Y +F + Q DAQEF+++LL
Sbjct: 704 VDMWQADMGALTPIPFRVRGSRLRPVEDAEICLKKTVCAYAPQFADSNQHDAQEFMIFLL 763
Query: 103 AALNEEAKVVPDQYNGSTYSNTS------SKQVGSFRALHYWEKFQTTEASVFSDIFVGQ 156
L+E+ + ++ T S Q+ S + W+ ++ T S+ D F GQ
Sbjct: 764 DGLHEDLNRILQRHIIETRPEREAELEALSTQIASEQE---WQLYRMTNNSIIVDYFQGQ 820
Query: 157 LRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWE 216
R+ + C C +TST Y F
Sbjct: 821 FRNRME--------------------------------------CMTCHKTSTTYNTFMH 842
Query: 217 LSLPVPPGGG----TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLI 268
LSLPVP +L +CL+ F E + T C CK K+ + RLPPVL+
Sbjct: 843 LSLPVPDHKQASRVSLQQCLDAFVQQEVMEKTDAWNCPNCKALRKATKVLTLCRLPPVLL 902
Query: 269 LWFKRFS--SNFTQKVTSPIKFPREGLDMEYYI----------------------SASGR 304
+ KRFS FT+K+ + + FP LD+ Y+ S R
Sbjct: 903 IHLKRFSFKGPFTEKIETLVDFPINNLDLTGYMPPPLPAGAERTIVKYGRPQVLGSDDPR 962
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
R + Y YDL V+NH G T GHYTA+ W DD+ ++ D V
Sbjct: 963 RQQPPYKYDLFGVTNHYG-TLSSGHYTAFV--SSAAGWRYCDDSRITRADKNAV----VT 1015
Query: 365 HGAYILVYQR 374
AYIL Y+R
Sbjct: 1016 KAAYILFYKR 1025
>gi|340503036|gb|EGR29667.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 381
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 176/384 (45%), Gaps = 51/384 (13%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCYINS LQCL N L + + K++G + D ++ M ++
Sbjct: 27 GLQNIGNTCYINSALQCLFNCSQLLEYFLQKIDEKEKNQKNKG-VSDEFAKLIRKMATNN 85
Query: 67 NLVLNTKAILLA-LRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQYNGSTYSNT 124
L + L + + KF GN Q+D QEFL LL LN++ +V+ + ++
Sbjct: 86 KLTPEYPSELKSSIEKICTKFKGNNQEDCQEFLRTLLENLNDDLNRVIGKKPYKELEADP 145
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
++Q + +++ ++ + S+ +DIF GQL S V C C++ S ++ F +LSL
Sbjct: 146 KNQQDLQKISDIWFQYYKERDNSIITDIFTGQLLSIVSCLKCEKQSYAFDNFMDLSLSF- 204
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
+N R + VYE L + +F E L N
Sbjct: 205 -----------------TNNHRFNFVYE---------------LERLIEQFLKEEPLDNA 232
Query: 245 --CQYCKKQSDLVKLYEIQRLPPVLILWFKR--FSSNFTQKVTSPIKFPREGLDMEYYIS 300
CQ CK + + +EIQ+LP VL++ KR F S +K+ I F + LD+ +I
Sbjct: 233 YYCQKCKNHTKSKRRFEIQKLPDVLVIHIKRFYFGSIRKEKLLHKITFNIQNLDLRKFIK 292
Query: 301 ASGRRVESRY-------TYDLCAVSNHIGKTALY-GHYTAYCRREGTGRWYLYDDTVVSP 352
S + + Y TYDL + NH+G L+ GHY A C+ G W ++D + S
Sbjct: 293 NSSNKQQKLYDKSVLDCTYDLIGIVNHMG--GLHGGHYYAECKNPYDGTWNQFNDAICSE 350
Query: 353 VDAQTVE-SAEAEHGAYILVYQRR 375
++ + + Y+L YQ+R
Sbjct: 351 INILNKKYDTDGSSEPYMLFYQKR 374
>gi|348572084|ref|XP_003471824.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Cavia porcellus]
Length = 378
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 163/377 (43%), Gaps = 66/377 (17%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMM 62
PG+ G+ N GNTCY+N+VLQCL++ P + + K ++ A + M
Sbjct: 47 PGVAGLRNLGNTCYMNAVLQCLASVPPLAQYFRSGQY-VTALRKDCREVATAFAYLLTDM 105
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
W ++ + AL F QQDAQEFL+Y+L AL+E
Sbjct: 106 WLGDADCVSPEEFRAALGRLHPDFTKRTQQDAQEFLIYVLNALHE--------------- 150
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
+ R H G+ RS+ RC C R I E S+
Sbjct: 151 --------ALRKYHQRS---------------GEKRSTQRC--CSRG-----IASETSII 180
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL 241
L+E QL S+ C C+ S E+F LSLP+P TL +CL FF +TL
Sbjct: 181 T-----QLFEGQLNYSIMCLKCENCSYRNEVFTVLSLPIPSEYECTLQDCLQCFFQQDTL 235
Query: 242 ----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDM 295
C +C+ + + I + P +I KRF +K+ + I +P LD+
Sbjct: 236 TWNNQIHCSFCETKQETAVRASISKPPKTIIFHLKRFDIQGQVKRKLRTDIHYPLTNLDL 295
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
YI R+ Y+LCAV NH G GHYTA CR T WY +DDT VS + A
Sbjct: 296 TPYICPVFRKHPK---YNLCAVVNHFGDLD-GGHYTASCRNSVTQAWYSFDDTRVSEIPA 351
Query: 356 QTVESAEAEHGAYILVY 372
V+++ AY+L Y
Sbjct: 352 PLVQTS----MAYLLFY 364
>gi|303272151|ref|XP_003055437.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463411|gb|EEH60689.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 364
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 169/394 (42%), Gaps = 64/394 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++NS +QCL++ P F + L+E P +P + + L A+ +K +
Sbjct: 7 GLRGLQNLGNTCFLNSCVQCLAHAPPFSDYFLSE--PAYPRRRKKTILAPAMEAVVKAIH 64
Query: 64 SSGNLVL--------NTKAILLALRSYT--KKFDGNQQQDAQEFLLYLLAALNEEAKVV- 112
+ V N + +L A+ F Q D+QEFL LL LN+E VV
Sbjct: 65 DANPSVASARRVAAHNPRGLLRAMDDVPPLDLFTDRDQHDSQEFLRMLLENLNDELNVVE 124
Query: 113 -PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
P Y T + V +A W ++ SV + F GQLRSSV C C ST
Sbjct: 125 KPPPYREEKDDFTEPENV---KADRLWAQYVARCDSVMTRTFAGQLRSSVECHKCGTCST 181
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYEC 231
Y+ FW+LSLP LR+S + S I + +C
Sbjct: 182 SYDPFWDLSLP------------LRASKKGSVGGGGGGAGPI-------------GVIDC 216
Query: 232 LNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIK 287
L F ETL TC CK + K ++R P VL++ KRF+ K P K
Sbjct: 217 LRAFTEDETLEGSDTRTCPKCKVKGSATKRLRVKRWPRVLVIHLKRFTWG---KSGRPGK 273
Query: 288 FPREGLDMEYYISAS---------GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
+D+ Y +S G R Y L AV+NH+G GHYTA C G
Sbjct: 274 KMDAAVDVPYDLSLGDFLADDALEGGRGLHPPKYKLFAVTNHMGSLG-GGHYTASC-EVG 331
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
G+W+ ++D S D S AY+L Y
Sbjct: 332 GGKWFTFNDENCSGEDGPPRVSKH----AYVLFY 361
>gi|443897977|dbj|GAC75315.1| ubiquitin C-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 1070
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 179/407 (43%), Gaps = 87/407 (21%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNT-PAFRNVL-------LNEDIPIHPDSKSQGQLVDAL 55
GL G+ N GN+CY+NS LQCLS T P R +L +N P+ +QGQL AL
Sbjct: 715 GLTGLKNLGNSCYMNSTLQCLSATIPLARFLLDGSYKQAINRTNPL----GTQGQLAMAL 770
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------- 108
+ +MW ++ A+ + F G Q D+QEFL LL L+E+
Sbjct: 771 AGLIHVMWGEKYAFVSPVTFREAMARFAPSFRGYDQHDSQEFLAILLDGLHEDLNYVVTR 830
Query: 109 ---AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN 165
++ P++ T +QV S + W ++ S+ D F GQ R+ + C
Sbjct: 831 PAAVEMTPER---EAQLETLPQQVASVKE---WAIYRMRNDSLVVDWFQGQFRNKLTCLT 884
Query: 166 CKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG 225
C +TST YE + LSLPVP G G G
Sbjct: 885 CGKTSTTYEAYTYLSLPVPHGRGV----------------------------------GK 910
Query: 226 GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFT 279
+L +CL+ F E L C C K K I RLP +L++ KRFS FT
Sbjct: 911 VSLEQCLDAFVREEVLDKADMWNCPRCNKPRKATKRLSISRLPQILLIHLKRFSFKGPFT 970
Query: 280 QKV-TSPIKFPREGLDMEYYISA-----SGRRVES-----RYTYDLCAVSNHIGKTALYG 328
K+ T+ +D+ Y+ A SG +VES Y YDL AV++H G G
Sbjct: 971 DKIDTTVTFPTTTPMDLTNYMPAPLPPGSG-QVESGSQRPPYRYDLYAVTHHFGSLNT-G 1028
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
HYTA + +G W+ DD+ ++ D + + + + Y+L ++R+
Sbjct: 1029 HYTATVK--SSGEWWYCDDSRITRGDDRQLHT----NSPYVLWFRRK 1069
>gi|296417169|ref|XP_002838233.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634156|emb|CAZ82424.1| unnamed protein product [Tuber melanosporum]
Length = 1078
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 171/404 (42%), Gaps = 80/404 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNT-PAFRNVL-------LNEDIPIHPDSKSQGQLVDAL 55
G G+ N GNTCY+N+VLQC+S T P R L +++D P+ S+G L +A
Sbjct: 718 GTTGLKNLGNTCYMNAVLQCMSGTIPLSRYFLDGSYKSHVSKDNPL----GSRGVLAEAF 773
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
++ +WS ++ I + F N QQDAQEFL +LL L+E+ + P
Sbjct: 774 AAIVRHLWSGEYSFISPITIKDVAGRLNEMFRNNDQQDAQEFLEFLLDGLHED--LNPHA 831
Query: 116 YNGSTYSNTSSKQVGSFR------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
+G ++ R ++ W+++ SV + F GQL S + C C RT
Sbjct: 832 NHGKLRPLNDDEECRRERLPVQLASIIEWQRYTHHNYSVVVNWFQGQLSSMLSCLTCGRT 891
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
ST Y F LSLP+P + + +N TL
Sbjct: 892 STTYSPFMYLSLPIP-------------ATKSNNF----------------------TLR 916
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVT 283
+CL +F ETL C CKK K I RLP +LI+ KRF++ + K+
Sbjct: 917 DCLEEFVGEETLEGNDAWLCPRCKKARKATKKLTITRLPHILIIHLKRFTNRGPWRDKLN 976
Query: 284 SPIKFPREGLDMEYYISASGRRVE-------------SRYTYDLCAVSNHIGKTALYGHY 330
+ + P LD+ Y+ E + YDL A+ NH G T GHY
Sbjct: 977 TFVDIPLRHLDLTKYMPPPLASDELPRTLPPPTAETTPPFFYDLYAICNHYG-TINGGHY 1035
Query: 331 TAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
TA R G W +DD+ A VE AY+L + R
Sbjct: 1036 TAVVRSSCKGGWNSFDDS-----KATLVEEERVTKNAYVLFWVR 1074
>gi|336363428|gb|EGN91818.1| hypothetical protein SERLA73DRAFT_66796 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1114
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 170/414 (41%), Gaps = 97/414 (23%)
Query: 6 NGIANAGNTCYINSVLQCLSNTPAFRNVL--------LNEDIPIHPDSKSQGQLVDALVN 57
+G+ N GNTCY+NS +QCLS T F +N P+ ++G L A N
Sbjct: 750 SGLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNAVNMLNPL----GTKGNLALAFSN 805
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ M S L A ++ S+ +F G++Q D+QEFL +LL L+E+ V
Sbjct: 806 ILYEMAHSELPHLTPNAFRRSICSHAPQFSGSEQHDSQEFLSFLLDGLHEDLNRV---LQ 862
Query: 118 GSTYSNTSSKQV------GSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
Y T ++ + W ++ S+ D F GQ R+ +
Sbjct: 863 KPHYEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRME--------- 913
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG----T 227
C C +TST Y F L+LP+P G +
Sbjct: 914 -----------------------------CLTCHKTSTTYNTFMYLTLPIPIVRGSSKVS 944
Query: 228 LYECLNKFFNGETLHNT------CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFT 279
L CL+ F E L NT C CK K + RLPP+L++ KRFS FT
Sbjct: 945 LQSCLDAFVKEEILENTDAWYVHCPNCKALRKATKRLSLSRLPPILLIHLKRFSFKGPFT 1004
Query: 280 QKVTSPIKFPREGLDMEYY------------------ISASGRRVES-RYTYDLCAVSNH 320
K+ + + FP LD+ Y +S R+++ Y YDL V+NH
Sbjct: 1005 DKIETVVDFPLRTLDLTNYMPPPLPPGMDKGNMNGANLSTEDPRMQTPPYKYDLYGVTNH 1064
Query: 321 IGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
G T GHYTA+ G W DD+ V+P DA+ V AY+L Y+R
Sbjct: 1065 FG-TLSGGHYTAFIASRGG--WVYCDDSRVTPTDAKQV----VGRPAYVLYYKR 1111
>gi|402874299|ref|XP_003900979.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Papio anubis]
Length = 373
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 167/378 (44%), Gaps = 63/378 (16%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S G+ G+ N GNTCY+N++LQCL + L+ I ++ A M
Sbjct: 40 SQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-ITALQNDCSEVATAFAYLMTD 98
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW + ++ + AL + F QQDAQEFL+Y+L L+E K +Y+ Y
Sbjct: 99 MWLGDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALK----KYH---Y 151
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
S + G A K+ TTE SV + +F GQ
Sbjct: 152 PRRRSHEKGP--AQRCCRKWITTETSVITQLFEGQ------------------------- 184
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGET 240
L S+ C C++ + E+F LSLP+P +L +CL FF +T
Sbjct: 185 -------------LNYSIVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDT 231
Query: 241 L----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLD 294
L C +C+ + + I + P ++I KRF T +K+ + I +P LD
Sbjct: 232 LTWNNQIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQRTTKRKLRTDIHYPLTNLD 291
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 292 LTPYICPIFRKYPK---YNLCAVVNHFGDLDG-GHYTAFCKNSFTQAWYSFDDTRVSEIP 347
Query: 355 AQTVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 348 DTSVQNA----TAYLLFY 361
>gi|195435249|ref|XP_002065614.1| GK14576 [Drosophila willistoni]
gi|194161699|gb|EDW76600.1| GK14576 [Drosophila willistoni]
Length = 318
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 162/366 (44%), Gaps = 58/366 (15%)
Query: 17 INSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSGNLVLNTKAIL 76
+NSV+QCLS+T + L + Q++ + MW++ + +
Sbjct: 1 MNSVIQCLSHTSELSSFLRSHHGSYPSSGNKDQQILHEFAKLISEMWTANVRSVAPMELK 60
Query: 77 LALRSYTKKFDGNQQQDAQEFLLYLLA----ALNEEAKVVPDQYNGSTYSNTSSKQVGSF 132
A + F QQDAQEFL + L ALN +K G+ Y K +
Sbjct: 61 RAFSRKHRMFSDFNQQDAQEFLRFFLDSLHLALNTGSK------GGTLY--IDDKVSDNK 112
Query: 133 RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 192
+A W + + E S+ D+FVGQL+S+++CS C TS ++ FW+LS+P+P
Sbjct: 113 KADLMWNWYSSHENSLIRDLFVGQLKSTLKCSTCGNTSVTFDPFWDLSVPLP-------- 164
Query: 193 CQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYC 248
SS RC L CLN F E L C C
Sbjct: 165 ---LSSTRCK-------------------------LDTCLNLFIKEEVLDGNDMPNCSRC 196
Query: 249 KKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISASGRRVES 308
+ + K + IQR P L++ KRFS K++ ++FP +++ S +
Sbjct: 197 QARRKSTKSFTIQRFPKYLVIHLKRFSGTRFSKLSHLVEFPTSARELDMGSYGSNSNSSA 256
Query: 309 RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAY 368
+Y+ L A+SNH+G T GHY A C+ + +W+ ++D +VS DA ES AY
Sbjct: 257 QYS--LYAISNHMGSTG-GGHYVALCKHPISHKWHEFNDNIVS--DA-LPESFLVSPSAY 310
Query: 369 ILVYQR 374
IL Y+R
Sbjct: 311 ILFYER 316
>gi|344248884|gb|EGW04988.1| Transient receptor potential cation channel subfamily M member 7
[Cricetulus griseus]
Length = 2128
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 163/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL N L+ I K ++ A M MW
Sbjct: 1797 GVTGLRNLGNTCYMNAILQCLCNISPLVEYFLSGKY-ITALQKDCSEVTTAFAYLMTDMW 1855
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + L AL S F QQDAQEFL+Y+L L+E K Y
Sbjct: 1856 LGDSDCVSPEIFLSALGSLYPAFLKKTQQDAQEFLIYVLNELHEALK---KHCRRRAYER 1912
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
SS++ K +E S+ + +F GQ
Sbjct: 1913 RSSQKCC--------RKVMASETSIITRLFEGQ--------------------------- 1937
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
L S+ C C+ + E+F LSLP+P +L +CL FF +TL
Sbjct: 1938 -----------LNYSITCLKCENCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLT 1986
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P +++ KRF + +K+ + I++P LD+
Sbjct: 1987 WNNQIHCSFCEIKQETAVRATISKAPKIIVFHLKRFDIQGSVKRKLRTDIRYPLTNLDIT 2046
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 2047 PYICPVFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 2102
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 2103 SVQTA----TAYLLFY 2114
>gi|115399242|ref|XP_001215210.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192093|gb|EAU33793.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1063
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 174/397 (43%), Gaps = 64/397 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+AN G TCY+NS +QCLS T ++ + SQG + N ++ +W
Sbjct: 698 GLANFGVTCYMNSTIQCLSATVMLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 757
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 758 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 805
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q + V + R C R +
Sbjct: 806 --NWQRNPLRPLTFEEEMQREKMPVAKVSRIEWDRY------CHREESFI---------- 847
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +PP G G +Y+CL + E L
Sbjct: 848 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPPSGTGDIYQCLRSYCQEEMLS 903
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK + K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 904 GDEVWKCPYCKCERVATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLHGLRM 963
Query: 296 EYYISASGRRVESR---------------YTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
+ ++ AS V + +TYD V HIG + GHY + R
Sbjct: 964 DDFVFASAPPVSNDANAAVRQDMSPTAPPFTYDAYGVLRHIGSSMGSGHYISLVRDAQRQ 1023
Query: 341 RWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
W +DD S P D + + + E AYI+ Y+R
Sbjct: 1024 CWRKFDDDRSSDFNPRDLRYKDRLQNEQ-AYIVFYER 1059
>gi|74000108|ref|XP_850913.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
isoform 1 [Canis lupus familiaris]
Length = 373
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + ++ I + ++ A M MW
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFVSGKY-ITALQRDCREVATAFAYVMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL S F QQDAQEFL+Y+L L+E K Y
Sbjct: 101 LGDSECVSPEVFRSALGSLYPAFMKKTQQDAQEFLIYVLNELHEALK---------KYHR 151
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S + GS L K +E+S+ + +F GQ
Sbjct: 152 KRSHEKGS--VLRCCRKVIASESSIITQLFEGQ--------------------------- 182
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
L S+ C C+ + E+F LSLP+P +L +CL FF +TL
Sbjct: 183 -----------LNYSIMCLKCENCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLT 231
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P ++I KRF +K+ + I +P LD+
Sbjct: 232 WNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDILGTMKRKLRTDIHYPLTNLDLT 291
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 292 PYICPVFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 347
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 348 SVQTA----TAYLLFY 359
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 166/376 (44%), Gaps = 76/376 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++N+VLQCL+ TPA LL++D +K L + + + + SS
Sbjct: 203 GLVNMGNTCFLNAVLQCLTYTPALAQFLLSDDCTRMSRNKGPDALHNLATHVRRALSSSA 262
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+ +AI+ LR+ K+F +Q+DA EF+ +L+ AL + A Q +
Sbjct: 263 GPSITPQAIVSKLRTIYKRFRLGRQEDAHEFMRFLIEALQKSAVSTVGQLD--------- 313
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
E+ +TT SV IF G LRS VRC +CK S Y+ F +LSL
Sbjct: 314 ------------ERSKTT--SVIHGIFGGYLRSQVRCLSCKYESNTYDPFLDLSL----- 354
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQ 246
+ +CQ TL + L FF+ E L Q
Sbjct: 355 --EIGKCQ--------------------------------TLDKALRHFFSPEKLLRENQ 380
Query: 247 Y----CKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDMEYYIS 300
Y C+K D +K + LP VL + KRFS S F KV +++P E LDM Y++
Sbjct: 381 YRCDGCRKYVDALKQFSCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYP-EILDMAPYVN 439
Query: 301 ASGR-RVESRYT-YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+ + + R T Y L AV H G + GHY Y R WY DD VS Q V
Sbjct: 440 KTQQASMTDRGTRYRLYAVLVHAGHSLQSGHYYCYV-RNSNNIWYRMDDARVSTASQQEV 498
Query: 359 ESAEAEHGAYILVYQR 374
AYIL Y R
Sbjct: 499 ----MRQQAYILFYTR 510
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 175/389 (44%), Gaps = 68/389 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDS--KSQGQLVDALVN 57
S GL G+ N GNTC++NS +Q LSNT + +++ I+PD+ SQG +V +
Sbjct: 45 SQGLLGLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHVKEINPDNPLSSQGNIVQSFAQ 104
Query: 58 FMKMMWSSGNL-------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
++++W + L + + +Y F Q+DA EF+ +LL ++E+
Sbjct: 105 LIRLLWQKVDQYTLEEIQALKPTQFISTIGNYNPIFAEGTQEDAHEFIAFLLDMIHEDLN 164
Query: 111 VVPDQ-YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
+ + Y T +K + A W K+ + S+ D+F G + ++
Sbjct: 165 RIKKKPYVEQT---KFTKLPTNDDAHQEWTKYLSRNQSIIVDLFQGHMLDTLS------- 214
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
C CK + +E F LS+PV L
Sbjct: 215 -------------------------------CLTCKSSRYCFEPFMYLSVPVLSRECDLL 243
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
EC+ +F ETL C C ++ D K ++ +P +LI+ KRF +S F K+
Sbjct: 244 ECIEEFLKTETLTGDEGWNCTKCSQRRDSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIR 303
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
S +++P + L E + +++E + TYDL AV NH G T GHYTAY + +WY
Sbjct: 304 SLVRYPLQNLSFENLVCT--KQIE-KPTYDLYAVINHSG-TLTSGHYTAYAKNRDDLQWY 359
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
Y+D++VSPV E + AY+L Y
Sbjct: 360 HYNDSLVSPVS-----QPENQSDAYLLFY 383
>gi|378733709|gb|EHY60168.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 1111
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 178/395 (45%), Gaps = 65/395 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNT---PAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ N G TCY+NS LQCLS T AF N + E S G + N ++ +W
Sbjct: 750 GLTNFGVTCYMNSTLQCLSATIPLSAFFNDRVYEGYVQRNWKGSNGIMPKLYANLIQAVW 809
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ---YNGST 120
V+ +++ ++QQDA+EF +L+ L+E+ V ++ +T
Sbjct: 810 QEDTDVIKPSTFRNFCGRMNREWAIDRQQDAKEFFDFLVDCLHEDLNVNWERNPLRPLTT 869
Query: 121 YSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+++ RA W++++ + S S IF GQ S +R
Sbjct: 870 AEEMQRERMEIARASPIEWKRYEHRDHSFLSSIFAGQHASRLR----------------- 912
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNG 238
C C+RTST YE F+ +S+ +P G G +Y+CLN +
Sbjct: 913 ---------------------CLTCRRTSTTYEAFYSISIEIPRSGVGHIYDCLNSYCRE 951
Query: 239 ETLHN--TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---FTQKVTSPIKFPREGL 293
E L C YCK + + K + RLP L++ FKRF+++ QK+ +PI+FP GL
Sbjct: 952 EKLSELWRCPYCKCEREATKQIILTRLPQFLVIHFKRFAASKHERAQKIHTPIEFPLHGL 1011
Query: 294 DMEYYI--------SASGRRVE----SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
M+ ++ G+ V+ YTYD V H+G + GHY + + +G G
Sbjct: 1012 SMDDFVIPRPPPAPEQEGQPVDMATTPPYTYDAYGVLRHLGNSGDGGHYISIVKDQGRGC 1071
Query: 342 WYLYDDTVVSPVDAQTVESAEA-EHG-AYILVYQR 374
W +DD +D + S + ++G AYI+ YQR
Sbjct: 1072 WRKFDDERHYDLDPNKLGSRDRLQNGEAYIVFYQR 1106
>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
Length = 927
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 163/381 (42%), Gaps = 63/381 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNFM 59
G G+ N GNTCY+NS++Q L + L + + K+ +G + +
Sbjct: 583 GYTGLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKYRADINKKNFLGHKGLVAEHFAVVA 642
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ-YNG 118
K +W G + AL S F +QQDAQE L++LL L+E+ V D+ Y
Sbjct: 643 KGLWHGGFKNFQPRMFKEALASCNPIFGNYKQQDAQELLIFLLDGLHEDLNKVKDRRYIE 702
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
++ Q+ A WE S+ D+F GQ +
Sbjct: 703 EKDADGRPDQLV---ADESWENHTRLNKSIIVDLFQGQFK-------------------- 739
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFN 237
++++C +CK TS ++ F LSLP+P G TL CLN F
Sbjct: 740 ------------------ATIKCLSCKFTSVKFDAFMFLSLPIPTSGKATLESCLNLFQQ 781
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPRE 291
E L TC CK+ D + + R+P +LI+ KRF S+ + KV++ I +P
Sbjct: 782 TEKLTGDDRWTCPKCKRARDAERTLRLWRMPTLLIIHLKRFKSDGRWKSKVSTNISYPTT 841
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
G D++ ++ Y+L AV++HIG + GHY A CRR W DD V+
Sbjct: 842 GFDLKPQTLGKKKQP----PYNLIAVTHHIGASTDSGHYVASCRR--AKGWVKADDAEVT 895
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ ES AYIL Y
Sbjct: 896 AIS----ESKAISPTAYILFY 912
>gi|328863265|gb|EGG12365.1| ubiquitin-specific protease [Melampsora larici-populina 98AG31]
Length = 1194
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 161/365 (44%), Gaps = 77/365 (21%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNT-PAFR-------NVLLNEDIPIHPDSKSQGQLVDAL 55
G+ G+ N GNTCY+NS LQC+S T P R +N P+ ++G L + +
Sbjct: 866 GMTGLKNLGNTCYMNSTLQCISATIPLARFFKDGSYKRCINRVNPL----GTKGALAETV 921
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
++MMWS+ ++ A+ + +F G+ Q DAQEFL +LL L+E+ +V +
Sbjct: 922 AELVRMMWSAQYTFVSPTIFREAICRFAPQFRGSDQHDAQEFLGFLLDGLHEDLNLVTHK 981
Query: 116 YNGSTYSNTSSKQVGSF----RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
S+ ++ + + WE ++ + SV ++F GQ RS ++C C TST
Sbjct: 982 PAPIEMSSAREAELEALPTQLASAREWEIYKRRDNSVIVELFQGQYRSRLQCLTCGTTST 1041
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYEC 231
Y F LSLP+P G G S V +L +C
Sbjct: 1042 TYNTFMYLSLPIPTGRGM-------SKV---------------------------SLTQC 1067
Query: 232 LNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSP 285
L+ F E + C CK + K I RLPP+L++ KRFS F+ K+ +
Sbjct: 1068 LDAFLKEEIMEKDDAWNCPKCKTRRKATKRLSIARLPPILLIHLKRFSFKGPFSDKLEAF 1127
Query: 286 IKFPREGLDMEYYISASGRRVESRY--------------------TYDLCAVSNHIGKTA 325
+++P GLD+ YI A + + + YDL AV NH G +
Sbjct: 1128 VQYPLYGLDLTNYIPAPLESLNNHHPSKKSSSKNGGGGGGGGPSTVYDLYAVCNHFGSLS 1187
Query: 326 LYGHY 330
GH+
Sbjct: 1188 -SGHW 1191
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 170/394 (43%), Gaps = 60/394 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHP------------DSKSQGQ- 50
G G+ N GNTC++N++LQ LSN F +++P ++SQG
Sbjct: 82 GATGLRNLGNTCFMNAILQSLSNIEQFSCYF--KELPAVALRSGKTAGRRMYHTRSQGDN 139
Query: 51 ---LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNE 107
LV+ + +W + ++ A+ F G QQQDA EF+ YLL L+
Sbjct: 140 SVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLDHLHR 199
Query: 108 EAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
E QY+ + S+ S Q G + + SV + IF G L++ V C C
Sbjct: 200 EL-----QYSRNGASHPVSPQDGVRLSSAEGKCCTNGAPSVVTSIFGGLLQNEVNCLICG 254
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
S ++ F +LSL +P Q R KR+ P T
Sbjct: 255 TESRKFDPFLDLSLDIPS--------QFRQ-------KRSKD----------QEPSPTCT 289
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQK 281
L +CL F + E L T C CKK+ K + I LP VL L KRF ++ K
Sbjct: 290 LRDCLYSFTDLEELDETELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNK 349
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + ++FP +GLDM Y+ + YDL AV H G GHYTAY E
Sbjct: 350 IDTYVEFPLKGLDMRGYLLEPENSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSHEAC-- 407
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
WY ++D+ V+ + TV A+ AYIL Y R
Sbjct: 408 WYHFNDSTVTLTNEDTVRKAK----AYILFYVER 437
>gi|427797533|gb|JAA64218.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1080
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 172/380 (45%), Gaps = 56/380 (14%)
Query: 7 GIANAGNTCYINSVLQCLSNT-PAFRNVLLN---EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GNTCY+N+ LQCL+NT P + L + +DI + G++ + + M
Sbjct: 730 GLRNLGNTCYMNATLQCLANTIPLALHFLFDRYKKDINRESHRGTGGEVAHEFKSLLAQM 789
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
+ + V L R ++ + G +QQDA EFLL + L+E+ ++ G+
Sbjct: 790 YYNDKSVSPKGFKSLMGRLFSV-YAGYEQQDAHEFLLNFIDKLHEDVNRAVNR-KGAPAP 847
Query: 123 NTSSKQVG---SFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+V + R +W + SV SD+F G L S++ C C+++S+ +E+F L
Sbjct: 848 LPPVDEVALSLNGRINRFWCQHLDRHLSVVSDLFEGLLVSNLTCLVCRKSSSSFEVFSCL 907
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SLP+P G++ C L+ +CL F E
Sbjct: 908 SLPIPAVSGSV--CYLQ---------------------------------DCLKLFLETE 932
Query: 240 TLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF---TQKVTSPIKFPREG 292
++ C CK++ K I RLP +LI+ F RF ++K+ + + FP
Sbjct: 933 SMSGEAAWDCPTCKQKRKAEKRMIIARLPKILIVQFNRFRCETAWQSKKLQTYVHFPINN 992
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
LDM Y+ + + R Y L A NH G T GHY AYCR G+WY+YDD V+
Sbjct: 993 LDMNCYVDHTRVDTQHRPPYHLYAFLNHYG-TLATGHYIAYCRAGLGGQWYMYDDASVTE 1051
Query: 353 VDAQTVESAEAEHGAYILVY 372
V S + AYIL Y
Sbjct: 1052 VTL----SESDKRNAYILFY 1067
>gi|395737001|ref|XP_003776847.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Pongo abelii]
Length = 997
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 167/382 (43%), Gaps = 62/382 (16%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N NTCY+NS+LQCL N P F +DI +G++
Sbjct: 643 PALTGLHNLRNTCYMNSILQCLCNAPHLADYFNXNCYQDDINKSNLLGHKGEVAKVFGII 702
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + + F G QQD+QEFLL+L+ L+E+ N
Sbjct: 703 MKALWTGQYRCISPKDLKITIGKINYHFAGYSQQDSQEFLLFLMDGLHEDLNKTD---NR 759
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
TY ++ + F+A H +K + S+ +F GQ +
Sbjct: 760 KTYKEENNDHLNYFKAAEHAXQKHKRLNESIIVVLFQGQFK------------------- 800
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C + S +E F LSL + TL +CL F
Sbjct: 801 -------------------STVQCLTRHKKSRTFEAFMYLSLLIASTSNCTLXDCLRLFS 841
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPR 290
E L + C +C+ Q D K EI +LPPVL++ K FS N + QK+ + + FP
Sbjct: 842 KEEKLIDNNRFYCNHCRAQWDSXK-EEIWKLPPVLLVHLKHFSYNGRWKQKLQTSVDFPL 900
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E L + Y+ ++ Y+L +VS+H G GHYTAYC+ RW+ +DD +
Sbjct: 901 ENLALSQYVIGPKNNLKK---YNLFSVSDHCGGLD-GGHYTAYCKNAAKQRWFKFDDHEI 956
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
+ S+ AYIL Y
Sbjct: 957 ----SDISVSSVKSSAAYILFY 974
>gi|119480139|ref|XP_001260098.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
181]
gi|119408252|gb|EAW18201.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
181]
Length = 1108
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 176/395 (44%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS +QCLS T ++ + SQG + N ++ +W
Sbjct: 745 GLTNFGVTCYMNSTIQCLSATVMLSKFFIDNRFRFYVQKNWKGSQGVMPGLFANLIRSLW 804
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 805 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 852
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 853 --NWQRTPLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI---------- 894
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-GGGTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +PP G G +Y+CL + E L
Sbjct: 895 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPPTGTGDIYQCLRSYCQEELLS 950
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK + K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 951 GDEVWKCPYCKCERVATKQIIITRAPQILVIHFKRFSASKTQSARKIHTPIDFPLHGLRM 1010
Query: 296 -EYYISAS-GRRVESR-----------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
++ ISA+ G ++R +TYD V HIG T GHY + R W
Sbjct: 1011 DDFVISANPGSATDARAADMNSATTGPFTYDAYGVLRHIGSTMGSGHYISLVRDAQRQCW 1070
Query: 343 YLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
+DD T +P D + + + E AYI+ Y+R
Sbjct: 1071 RKFDDERATDFNPRDLRFKDRLQNEQ-AYIVFYER 1104
>gi|350631244|gb|EHA19615.1| hypothetical protein ASPNIDRAFT_179052 [Aspergillus niger ATCC
1015]
Length = 374
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 175/396 (44%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS LQCL+ T ++ + SQG + N ++ +W
Sbjct: 11 GLTNFGVTCYMNSTLQCLNATVVLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 70
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 71 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 118
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V V +I W+
Sbjct: 119 --NWQRTPLRPLTFEEEMQRERMPV---------------------PKVSKIEWDRYCHR 155
Query: 184 PPGG-GTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGETL 241
+L+ Q S +RC+ CKRTST YE F+ +S+ +PP G G +Y+CL + E L
Sbjct: 156 EESFISSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPPSGTGDIYQCLRSYCQEEML 215
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLD 294
C YCK + K I R P +L++ FKRFS++ TQ K+ +PI FP GL
Sbjct: 216 SGDEVWKCPYCKCERVATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLHGLR 275
Query: 295 MEYYISASGRRVESR-------------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
M+ ++ ++ + ++ +TYD V HIG + GHY + R
Sbjct: 276 MDDFVFSAYNQGQTNGLPHDPIAATVPPFTYDAYGVLRHIGSSMGSGHYISLVRDAQRQC 335
Query: 342 WYLYDDTVV---SPVDAQTVESAEAEHGAYILVYQR 374
W +DD V +P D ++ + + E AYI+ Y+R
Sbjct: 336 WRRFDDERVIDFNPRDLRSKDRLQNEQ-AYIVFYER 370
>gi|260166690|ref|NP_083439.2| putative ubiquitin carboxyl-terminal hydrolase 50 [Mus musculus]
gi|81892336|sp|Q6P8X6.1|UBP50_MOUSE RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 50;
AltName: Full=Deubiquitinating enzyme 50; AltName:
Full=Ubiquitin thioesterase 50; AltName:
Full=Ubiquitin-specific-processing protease 50
gi|38174591|gb|AAH61020.1| Ubiquitin specific peptidase 50 [Mus musculus]
gi|148696219|gb|EDL28166.1| ubiquitin specific peptidase 50, isoform CRA_a [Mus musculus]
Length = 390
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I K ++ A M MW
Sbjct: 43 GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKY-ITALKKDCSEVTTAFAYLMTDMW 101
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + L A+ S F QQDAQEFL+Y+L L+E K
Sbjct: 102 LGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALK-------KHCRRR 154
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ K+ G K E S+ + +F GQ
Sbjct: 155 VNEKRTGQ----SCCRKVPAQETSIITRLFEGQ--------------------------- 183
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
L S+ C C+ + E+F LSLP+P +L +CL FF +TL
Sbjct: 184 -----------LSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQQDTLT 232
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDME 296
C +C+ + + I ++P +++ FKRF T +K+ + I +P LD+
Sbjct: 233 WSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDIHYPLTNLDLT 292
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 293 PYICPVFRK---HPMYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 348
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 349 SVQTA----TAYLLFY 360
>gi|449675268|ref|XP_004208370.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like, partial
[Hydra magnipapillata]
Length = 284
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 144/307 (46%), Gaps = 64/307 (20%)
Query: 79 LRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV----PDQYNGSTYSNTSSKQVGSFRA 134
++ Y +F G+ QQDAQEFL YLL ++++ V P + S+ V
Sbjct: 26 IQKYASRFAGSNQQDAQEFLRYLLEGIHDDLNTVKKKTPLILDDKHLSDGEKSNV----- 80
Query: 135 LHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQ 194
YWE++ T E+S DIFVGQL+S +
Sbjct: 81 --YWERYLTKESSPMQDIFVGQLKSILT-------------------------------- 106
Query: 195 LRSSVRCSNCKRTSTVYEIFWELSLPVP-PGGGT--LYECLNKFFNGETLHN----TCQY 247
CS C+ S Y+ FW+LSLP+P P T L +C + ETL C+
Sbjct: 107 ------CSVCQYRSVTYDPFWDLSLPIPNPVTSTISLTKCFQAYTQEETLDGEEKPICEK 160
Query: 248 CKKQSDLVKLYEIQRLPPVLILWFKRFSSN-FTQKVTSPIKFPREGLDMEYYISASGRRV 306
CKK K + I+R P VL+L KRFS F K+ + ++FP+ E+ +S +R+
Sbjct: 161 CKKSRKCFKGFLIERFPKVLVLHLKRFSGQRFRSKLETKVEFPKVISLKEFSSDSSDQRI 220
Query: 307 ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHG 366
E Y+L V NH G T L GHYT++ + TG W++Y+D++V + SA
Sbjct: 221 EP--VYNLYGVVNHSGGT-LGGHYTSFVKHPDTGSWHIYNDSIVGETSVSRLISA----S 273
Query: 367 AYILVYQ 373
AY+L Y+
Sbjct: 274 AYLLFYE 280
>gi|395503246|ref|XP_003755981.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
isoform 2 [Sarcophilus harrisii]
Length = 371
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 160/378 (42%), Gaps = 65/378 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S G+ G+ N GNTCY+N++LQCL + L+ I K G+ A M
Sbjct: 38 SQGVTGLRNLGNTCYMNAILQCLCSITPLVEYFLSGKY-ITALQKDSGEAATAFAYLMTD 96
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW + ++ + A+ F QQDAQEFL+Y+L L+E K Y
Sbjct: 97 MWLGDSDCVSPEVFRAAIGKIYPAFLKRTQQDAQEFLIYVLNELHEALK---------KY 147
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+++ G + + K ++E+S+ + +F GQL + C
Sbjct: 148 RRKKTQENG--LSTKCYRKVASSESSIITRLFEGQLNYDIVC------------------ 187
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGET 240
++C NC + E+F LSLP+P +L ECL FF +T
Sbjct: 188 -----------------LKCENCTYKN---EVFTVLSLPIPSECECSLQECLGCFFQQDT 227
Query: 241 L----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLD 294
L C +C+ + D I + P +I KRF +K+ + I +P LD
Sbjct: 228 LTWNNQIHCAFCESKQDAAVRASIAKAPKTVIFHLKRFDCQGRVKRKLRTDIHYPLNNLD 287
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ YI R+ Y LC V NH G GHYTA+C+ WY +DDT V +
Sbjct: 288 LSPYIYPLFRK---HPKYSLCGVVNHFGDLD-GGHYTAFCKNTVNQTWYSFDDTRVCEIP 343
Query: 355 AQTVESAEAEHGAYILVY 372
V++A AY+L Y
Sbjct: 344 DSAVQTA----AAYLLFY 357
>gi|198435016|ref|XP_002126339.1| PREDICTED: similar to ubiquitin specific peptidase 8 [Ciona
intestinalis]
Length = 1094
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 161/358 (44%), Gaps = 56/358 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GN+CY+NSVLQC+ N +L + D+ G++ ++ +
Sbjct: 757 GLCGLRNLGNSCYMNSVLQCMFNMTQLAEYILTDSYTKDLNRANKIGHGGRVAESFSVLL 816
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD-QYNG 118
+ +WSS + + + F G Q+D+QEFL+ LL L+E+ P +Y
Sbjct: 817 RAVWSSKYEYIVPSDFKSIIGTINSSFAGYTQEDSQEFLMLLLDGLHEDLNKAPQSEYKE 876
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
++ + + A Y +K + S + E
Sbjct: 877 EPDNDALDDEEAAQMAWKYHKK--------------------------RNESIIVE---- 906
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
L + Q +++V+C +C + S ++ F LSLP+P ++Y+ L F
Sbjct: 907 -----------LLKGQFKATVKCLHCGKASRKFDPFMYLSLPLPNKSASIYDILKSFQRV 955
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREG 292
E + + C CK D V+ EI +LPPVLI+ FKRF + + K+ + I +P
Sbjct: 956 EQMTGSDRWHCPNCKTLRDAVRSIEIWKLPPVLIIHFKRFVHTGRWRDKIHTNISYPMTQ 1015
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
LD+ +IS RR + Y+L AVS+H G GHYTA C+ WY +DDT V
Sbjct: 1016 LDLTPFISGKQRRPK----YNLFAVSHHQGAGLDSGHYTASCKSVLDNNWYKFDDTEV 1069
>gi|358054547|dbj|GAA99473.1| hypothetical protein E5Q_06172 [Mixia osmundae IAM 14324]
Length = 1213
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 172/401 (42%), Gaps = 77/401 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNT-PAFR-------NVLLNEDIPIHPDSKSQGQLVDAL 55
GL G+ N GNTCY+NS +QCLS T P R +N P+ +QG L DA+
Sbjct: 787 GLTGLKNMGNTCYMNSTIQCLSATIPLARFFKDGSYRRAINRQNPM----GTQGVLADAV 842
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
+K++W+ + + A+ + +F G Q D+QEFL +LL L+E+ V
Sbjct: 843 GELIKVLWTETYNFVAPVSFRDAICRFAPQFRGTDQHDSQEFLAFLLDGLHEDLNFV--- 899
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
V R + T E + Q+ S R + +
Sbjct: 900 -------------VKKPRPVEM-----TPEREAALESLPTQVASEKEWQIYTRRNNSVIV 941
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLYECL 232
W ++ Q R+ ++C C +TST Y+ F LSLP+P +L +CL
Sbjct: 942 NW-------------FQGQYRNRLQCLTCGKTSTTYDTFMYLSLPLPNKSRSEVSLQQCL 988
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPI 286
+ F E L + C CK + K + RLPP+L++ FKRFS F++++ + +
Sbjct: 989 DAFVKEEVLEKSEAWNCPRCKTRRKATKRLTLSRLPPILLIHFKRFSFKGPFSERLDTVV 1048
Query: 287 KFPREGLDMEYYISASGRRV-----------------ESRYTYDLCAVSNHIGKTALYGH 329
++P LD+ Y+ S Y YDL AVSNH G + GH
Sbjct: 1049 RYPLSSLDLTNYLPPPLPPATANLYNVKPETVGPTASSSSYRYDLYAVSNHFGSLS-SGH 1107
Query: 330 YTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYIL 370
YTA+ + G W + D V D+ + ++ YIL
Sbjct: 1108 YTAFV-KNNRGWWSIGDSRVSKASDSDVQHAGKS---VYIL 1144
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 176/389 (45%), Gaps = 72/389 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-----EDIPIHPDSKSQGQLVDALVNF 58
GL G+ N GNTC++NS +Q LSNT + ++ E P +P S SQG +V +
Sbjct: 66 GLFGLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHIKEINPENPLS-SQGNIVKSFAQL 124
Query: 59 MKMMWSSGNL-------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV 111
++++W + VL + + +Y F Q+DA EF+ +LL ++E+
Sbjct: 125 IRLLWQKVDQYQYDDMKVLKPTQFISTVGNYNPIFAEGTQEDAHEFIAFLLDMIHEDLNR 184
Query: 112 VPDQ--YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
+ + + ++ + + W+K+ + S+ D+F GQ+ ++
Sbjct: 185 IKKKPYVEQAKFTKFPTNEDADAE----WKKYLSRNQSIIVDLFQGQMLDTLS------- 233
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
C CK + +E F LS+PV L
Sbjct: 234 -------------------------------CLTCKSSRYCFEPFMYLSVPVLNRECELQ 262
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKR--FSSNFTQKVT 283
EC+ +F ETL C C ++ D K ++ +P +LI+ KR F+S F K+
Sbjct: 263 ECIEEFLKKETLKGDEGWNCTNCNQRRDSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIR 322
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
S +K+P + L E + ++VE + TYDL AV NH G T GHYTAY + WY
Sbjct: 323 SLVKYPLQNLSFENLVCT--KQVE-KPTYDLYAVINHSG-TLTSGHYTAYGKNRDDLHWY 378
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D++V+P V+ E+ + AY+L Y
Sbjct: 379 HFNDSLVTP-----VQQPESLNDAYLLFY 402
>gi|134079115|emb|CAK40670.1| unnamed protein product [Aspergillus niger]
Length = 815
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 175/395 (44%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS LQCL+ T ++ + SQG + N ++ +W
Sbjct: 452 GLTNFGVTCYMNSTLQCLNATVVLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 511
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 512 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 559
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 560 --NWQRTPLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI---------- 601
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +PP G G +Y+CL + E L
Sbjct: 602 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPPSGTGDIYQCLRSYCQEEMLS 657
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK + K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 658 GDEVWKCPYCKCERVATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLHGLRM 717
Query: 296 EYYISASGRRVESR-------------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
+ ++ ++ + ++ +TYD V HIG + GHY + R W
Sbjct: 718 DDFVFSAYNQGQTNGLPHDPIAATVPPFTYDAYGVLRHIGSSMGSGHYISLVRDAQRQCW 777
Query: 343 YLYDDTVV---SPVDAQTVESAEAEHGAYILVYQR 374
+DD V +P D ++ + + E AYI+ Y+R
Sbjct: 778 RRFDDERVIDFNPRDLRSKDRLQNEQ-AYIVFYER 811
>gi|449666470|ref|XP_002164031.2| PREDICTED: uncharacterized protein LOC100201504 [Hydra
magnipapillata]
Length = 995
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 174/382 (45%), Gaps = 65/382 (17%)
Query: 5 LNGIANAGNTCYINSVLQCLSNT----PAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
L G+ N GNTCY+NSV+QCL+ T F + + + + + G+L L F+
Sbjct: 654 LTGLKNLGNTCYMNSVIQCLACTLPLGKYFTTGMYEKHLNLCNTNAHPGELARELA-FLI 712
Query: 61 MMWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQYNG 118
++ S+G ++ +AL + F G +QQDA E L++ + L+E+ K+V +
Sbjct: 713 IVISAGEYRSVSPIDFKIALGKFAPDFSGFKQQDAHELLMFFMDGLHEDVNKIVKKEIIK 772
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
++ S ++ + A W+ ++ SV D+F GQ
Sbjct: 773 VKETDNLSDEIAADIA---WKDYKLNNDSVIVDLFQGQF--------------------- 808
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE-CLNKFFN 237
RS+V C +C + S ++ F L LP+P T E C+ F
Sbjct: 809 -----------------RSTVTCLSCNKRSKTFDAFNCLQLPLPSNQSTTLENCIQTFTK 851
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPRE 291
E + C CK+ + K EI +LPPVLI+ KRF + K+ + + FP +
Sbjct: 852 AEKIGGNDSWKCSNCKRYREASKTIEIWKLPPVLIIQLKRFHFDGRWHNKIQTTVNFPMQ 911
Query: 292 GLDMEYYISASGRRVESRYT-YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
+M YI A +S +T Y L AV NH G GHYTA C +WY +DD++V
Sbjct: 912 NFNMSKYIVAP----QSIHTKYHLYAVINHYGSFE-SGHYTANCVNPYYEKWYNFDDSIV 966
Query: 351 SPVDAQTVESAEAEHGAYILVY 372
+D ++++ + AY+L Y
Sbjct: 967 KEIDVNSIKT----NTAYLLFY 984
>gi|334314734|ref|XP_001380549.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Monodelphis domestica]
Length = 370
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 159/378 (42%), Gaps = 66/378 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S G+ G+ N GNTCY+N++LQCL + L+ I K G+ A M
Sbjct: 38 SQGVTGLRNLGNTCYMNAILQCLCSITPLVEYFLSGKY-ITALQKDSGEAATAFAYLMTD 96
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW + ++ + A+ F QQDAQEFL+Y+L L+E K +
Sbjct: 97 MWLGDSDCVSPEVFRTAIGKIYPTFLKRTQQDAQEFLIYVLNELHEALKKYRRKKPHEKV 156
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ ++V S +E+S+ + +F GQL + C
Sbjct: 157 TTKCYRKVAS------------SESSIITRLFEGQLNYDIVC------------------ 186
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGET 240
++C NC + E+F LSLP+P +L ECL FF +T
Sbjct: 187 -----------------LKCENCTYKN---EVFTVLSLPIPSECECSLQECLGCFFQQDT 226
Query: 241 L----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLD 294
L C +C+ + D I + P +I KRF +K+ + I +P LD
Sbjct: 227 LTWNNQIHCAFCESKQDAAVRASIAKAPKTVIFHLKRFDCQGRMKRKLRTDIHYPLNNLD 286
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ YI R+ Y LC V NH G GHYTA+C+ + WY +DDT V +
Sbjct: 287 LSPYIYPLFRK---HPKYSLCGVVNHFGDLD-GGHYTAFCKNTVSQTWYSFDDTRVCEIP 342
Query: 355 AQTVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 343 DSSVQTA----AAYLLFY 356
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C C+K+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCRKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY + E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYAKHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLADEDTVVKAK----AYILFYVER 511
>gi|195383962|ref|XP_002050694.1| GJ20067 [Drosophila virilis]
gi|194145491|gb|EDW61887.1| GJ20067 [Drosophila virilis]
Length = 923
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 180/466 (38%), Gaps = 114/466 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-----EDIPIHPDSKSQGQLVDALVNF 58
GL G+ N NTCY+NS LQ LSN + +N E I P SK G L +
Sbjct: 33 GLVGLQNIANTCYMNSALQALSNLSPVTHYFINCSDLVEHIASTPRSKPAG-LAKSYQRL 91
Query: 59 MKMMW---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA------ 109
M+ MW L + IL +RS F G QQ D QEFL + L+EE
Sbjct: 92 MQEMWLDVDDPKDFLAPRGILYGIRSVHPMFRGYQQHDTQEFLRCFMDQLHEELTEPPQP 151
Query: 110 -------------------KVVPDQYNGSTYSNTSSKQVGS----------FRALHYWEK 140
VP + T S + S + +Y
Sbjct: 152 QLPQGQQQQQASETDDENYDEVPKACHTPTASESEYDTCESSISERSSEVLMKTEYYIAP 211
Query: 141 FQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVR 200
+ + ++ SD Q +S K + I + +++ +L SSV+
Sbjct: 212 HRNSSSNPISDTSTTQQQSPKTVQESKPVEAAHSIISD-----------VFDGKLLSSVQ 260
Query: 201 CSNCKRTSTVYEIFWELSLPVPP------------------------------------- 223
C C R ST E F +LSLP+P
Sbjct: 261 CLTCDRISTREETFQDLSLPIPTRDFLNVLHQTHSLSVQSLNAADLASARSNEGWLAWMW 320
Query: 224 ---------GGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILW 270
TLY+C+ FF+ + L +C+ C K +K + LP VL +
Sbjct: 321 NMVRSWIFGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLNLPEVLCIH 380
Query: 271 FKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYG 328
KRF + ++ K++S + FP EG DM Y+ + TY+LC+V H G T G
Sbjct: 381 LKRFRHDLSYSSKISSHVYFPLEGFDMRPYLHKDCTSLVP--TYNLCSVICHHG-TVGGG 437
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
HYT Y R GRWY +DD +V V V++ + AY+L YQ+
Sbjct: 438 HYTCYARNALNGRWYEFDDQLVMEVTPDVVQNCQ----AYVLFYQK 479
>gi|392346694|ref|XP_003749615.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
[Rattus norvegicus]
Length = 385
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL +T L+ I K ++ A M MW
Sbjct: 38 GVTGLRNLGNTCYMNAILQCLCSTSPLVEYFLSGKY-ITALQKDCSEVTTAFAYLMTDMW 96
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + L A+ S F QQDAQEFL+Y+L L+E K
Sbjct: 97 LGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALK-------KHCRGR 149
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S K+ A + K E S+ + +F GQ
Sbjct: 150 ASEKRT----AQNCCRKVPAHETSIITRLFEGQ--------------------------- 178
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
L S+ C C+ + E+F LSLP+P +L +CL FF +TL
Sbjct: 179 -----------LSYSITCLKCETCTYKNEVFTILSLPIPSEYECSLQDCLQCFFQQDTLT 227
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P +++L KRF +K+ + I +P LD+
Sbjct: 228 WNNQIHCSFCEIKQETAVRTTISKAPKIIVLHLKRFDIQGAVKKKLRTDIHYPLTNLDLT 287
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 288 PYICPVFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 343
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 344 SVQTA----TAYLLFY 355
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 182/403 (45%), Gaps = 84/403 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVL-----LNEDIPIHPDSKSQGQ------- 50
P +G+ N GNTC++N+VLQ LSN F + L E + +++
Sbjct: 117 PRSSGLRNLGNTCFMNAVLQSLSNIQQFCGYIKQLPSLEEKVTKVKKIQTRKSKTPEEDV 176
Query: 51 -LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE- 108
LV+ L + +W ++ +++ + +F G QQQDA EF+ YLL L+ E
Sbjct: 177 LLVEELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTEL 236
Query: 109 AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
++P Y N+ S +G ++++ + IF G L++ V C C
Sbjct: 237 LTLLP-------YPNSDSPFIGP-----------KGKSTIVTAIFGGLLQNEVTCLVCGV 278
Query: 169 TSTVYEIFWELSLPVPPGGGTL-YECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
S ++ F +LSL +P T + + +RC T
Sbjct: 279 ESKKHDPFLDLSLDIPQQFCTRGVKAKDGEQLRC-------------------------T 313
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQK 281
L +CL F E L + C CKK+ K + I+RLP VL L KRF S F K
Sbjct: 314 LSDCLQSFTELEELEESELYMCSTCKKKQRSTKKFWIRRLPNVLCLHIKRFRWQSFFRVK 373
Query: 282 VTSPIKFPREGLDMEYYI---------SASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
+ + ++FP EGL+M YI S SG YDL AV H G A GHYT+
Sbjct: 374 LETFVEFPLEGLNMHKYILDNLHETRGSGSGSN-----EYDLAAVVVHHGSGAGSGHYTS 428
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
Y R E G+W+ ++D+ V+P + +TV A+ AYIL Y RR
Sbjct: 429 YARHE--GQWFHFNDSTVTPCEPETV----AKCKAYILFYIRR 465
>gi|410961319|ref|XP_003987231.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
carboxyl-terminal hydrolase 50-like [Felis catus]
Length = 381
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 166/378 (43%), Gaps = 66/378 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S G+ G+ N GNTCY+N++LQCL + L+ I K ++ A M
Sbjct: 40 SQGVTGLRNLGNTCYMNAILQCLCSISPLAEYFLSGKY-ITALQKDCSEVATAFAYVMTD 98
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW + ++ + A + F QQDAQEFL+Y+L L+E K
Sbjct: 99 MWLGDSECVSPEIFRSAFGNLYPAFMKKTQQDAQEFLIYVLNELHESLKKC--------- 149
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ S + GS RC C++T I E+S+
Sbjct: 150 -HRKSYEKGSIP----------------------------RC--CRKT-----IANEVSI 173
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGET 240
L+E QL S+ C C+ + E+F L LP+P +L +CL FF +T
Sbjct: 174 IT-----QLFEGQLNYSIMCLKCENCTYKNEVFTILCLPIPSDYECSLQDCLQCFFQQDT 228
Query: 241 L--HNT--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLD 294
L HN C +C+ + + I + P V+I KRF +K+ + I +P LD
Sbjct: 229 LTWHNQIHCSFCETKQETAVRASISKAPKVIIFHLKRFDILGTMKRKLRTDIHYPLTNLD 288
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 289 LSPYICPVFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIP 344
Query: 355 AQTVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 345 DTSVQTA----TAYLLFY 358
>gi|317032259|ref|XP_001394433.2| ubiquitin hydrolase [Aspergillus niger CBS 513.88]
Length = 1101
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 175/395 (44%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS LQCL+ T ++ + SQG + N ++ +W
Sbjct: 738 GLTNFGVTCYMNSTLQCLNATVVLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 797
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 798 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 845
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 846 --NWQRTPLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI---------- 887
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +PP G G +Y+CL + E L
Sbjct: 888 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPPSGTGDIYQCLRSYCQEEMLS 943
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK + K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 944 GDEVWKCPYCKCERVATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLHGLRM 1003
Query: 296 EYYISASGRRVESR-------------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
+ ++ ++ + ++ +TYD V HIG + GHY + R W
Sbjct: 1004 DDFVFSAYNQGQTNGLPHDPIAATVPPFTYDAYGVLRHIGSSMGSGHYISLVRDAQRQCW 1063
Query: 343 YLYDDTVV---SPVDAQTVESAEAEHGAYILVYQR 374
+DD V +P D ++ + + E AYI+ Y+R
Sbjct: 1064 RRFDDERVIDFNPRDLRSKDRLQNEQ-AYIVFYER 1097
>gi|194034732|ref|XP_001927691.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Sus scrofa]
Length = 373
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 163/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I K ++ A M MW
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-ITALQKDCSEVATAFAYVMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + QQDAQEFL+Y+L L+E K + +Y N
Sbjct: 101 LGDSECVSPEIFRSALGNLYPALMKKTQQDAQEFLIYVLNELHEALK---KYHRRRSYEN 157
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S + K +E+S+ + +F GQL S+ C
Sbjct: 158 RSIPRCC--------RKMIASESSIITRLFEGQLSYSIIC-------------------- 189
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
++C NC + E+F L LP+P +L +CL FF +TL
Sbjct: 190 ---------------LKCENCTYKN---EVFTVLPLPIPSEYECSLQDCLQCFFQQDTLT 231
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P +++ KRF +K+ + I +P LD+
Sbjct: 232 WNNQIHCSFCETKQETAVRASISKAPKIIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLT 291
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 292 PYICPIFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 347
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 348 SVQTA----TAYLLFY 359
>gi|291403016|ref|XP_002717774.1| PREDICTED: Putative ubiquitin carboxyl-terminal hydrolase 50-like
[Oryctolagus cuniculus]
Length = 373
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I K + A M MW
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLGSISPLVEYFLSGKY-ITALQKDCSDVATAFAYLMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + F QQDAQEFL+Y+L L+E K Y
Sbjct: 101 LGDSDCVSPEIFRSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALK---------KYHR 151
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S + GS + K E S+ + +F GQL + C
Sbjct: 152 RRSYEKGSTQRC--CRKAIANETSIITQLFEGQLNYGIIC-------------------- 189
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
++C NC + E+F LSLP+P +L +CL FF +TL
Sbjct: 190 ---------------LKCENCTYRN---EVFTVLSLPIPSEYECSLQDCLQCFFQQDTLT 231
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDME 296
C +C+ + + I + P ++I KRF T +K+ + I +P LD+
Sbjct: 232 WNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDIQGTVKRKLRTDIHYPLTNLDLT 291
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 292 PYICPVFRKHPK---YNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPNT 347
Query: 357 TVESAEAEHGAYILVY 372
+V+++ AY+L Y
Sbjct: 348 SVQTST----AYLLFY 359
>gi|159129011|gb|EDP54125.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
A1163]
Length = 1108
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 174/395 (44%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS +QCLS T ++ + SQG + N ++ +W
Sbjct: 745 GLTNFGVTCYMNSTIQCLSATVMLSKFFIDNRFRFYVQKNWKGSQGIMPGLFANLIRSLW 804
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 805 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 852
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 853 --NWQRTPLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI---------- 894
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP-PGGGTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL + E L
Sbjct: 895 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPHTGTGDIYQCLRSYCQEELLS 950
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK Q K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 951 GDEVWKCPYCKCQRVATKQIIITRAPQILVIHFKRFSASKTQSARKIHTPIDFPLHGLRM 1010
Query: 296 -EYYISAS-GRRVESR-----------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
++ ISA+ G + R +TYD V HIG T GHY + R W
Sbjct: 1011 DDFVISANPGSATDDRAADMTSATTGPFTYDAYGVLRHIGSTMGSGHYISLVRDAQRQCW 1070
Query: 343 YLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
+DD T +P D + + + E AYI+ Y+R
Sbjct: 1071 RKFDDERATDFNPRDLRFKDRLQNEQ-AYIVFYER 1104
>gi|70989509|ref|XP_749604.1| ubiquitin C-terminal hydrolase [Aspergillus fumigatus Af293]
gi|66847235|gb|EAL87566.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
Af293]
Length = 1108
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 174/395 (44%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS +QCLS T ++ + SQG + N ++ +W
Sbjct: 745 GLTNFGVTCYMNSTIQCLSATVMLSKFFIDNRFRFYVQKNWKGSQGIMPGLFANLIRSLW 804
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 805 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 852
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 853 --NWQRTPLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI---------- 894
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP-PGGGTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL + E L
Sbjct: 895 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPHTGTGDIYQCLRSYCQEELLS 950
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK Q K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 951 GDEVWKCPYCKCQRVATKQIIITRAPQILVIHFKRFSASKTQSARKIHTPIDFPLHGLRM 1010
Query: 296 -EYYISAS-GRRVESR-----------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
++ ISA+ G + R +TYD V HIG T GHY + R W
Sbjct: 1011 DDFVISANPGSATDDRAADMTSATTGPFTYDAYGVLRHIGSTMGSGHYISLVRDAQRQCW 1070
Query: 343 YLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
+DD T +P D + + + E AYI+ Y+R
Sbjct: 1071 RKFDDERATDFNPRDLRFKDRLQNEQ-AYIVFYER 1104
>gi|453088529|gb|EMF16569.1| cysteine proteinase [Mycosphaerella populorum SO2202]
Length = 1037
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 166/407 (40%), Gaps = 76/407 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDS--KSQGQLVDALVNFMKMM 62
GI N GNTCY+N+ LQ LS T ++L++ + D+ S+G L + N ++ +
Sbjct: 661 GIHNFGNTCYMNATLQALSATTPLTILMLDDQYKKMVQKDNWKGSRGLLPEIYANMVRSL 720
Query: 63 WSSGNLVLNTKAILLALRSYTKKF-DGNQQQDAQEFLLYLLAALNEEAKVV----PDQYN 117
W G + +L F D QQQDAQEF +++ L+E+ V P +
Sbjct: 721 WQGGVDYIKPSTLLTFCGRLNSTFKDPTQQQDAQEFFSFIVDCLHEDFNTVWSKMPLRVL 780
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ A W ++ E S + +F GQ S +R
Sbjct: 781 TEQEEAKRERMPPLVVAKTEWGRYIHRENSFLTSLFYGQHSSRLR--------------- 825
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
CS C TST YE + L L +P L +CL F
Sbjct: 826 -----------------------CSACSFTSTTYEAWALLQLEIPEVETRLKDCLRAHFR 862
Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF---TQKVTSPIKFPR 290
E L TC CK K + R PP L++ KRF N +K+++ ++FP
Sbjct: 863 SEELDGENQWTCPRCKVPRRATKKLTMTRAPPFLVVALKRFKQNARGEQRKLSTAVRFPL 922
Query: 291 EGLDMEYYI----SASGRRVESR----------------YTYDLCAVSNHIGKTALYGHY 330
GLDME +I S S + +R Y YD AV H+G T GHY
Sbjct: 923 TGLDMEEFILQPPSPSEVQEIAREHGHDTLKVDDSLSPPYIYDAYAVVRHMGSTTTSGHY 982
Query: 331 TAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
TA R G W +++DT + +T+ EA + AY + +QRR
Sbjct: 983 TAVVRDTARGCWRIFNDTQYRDIKPETLSPGEALDNNQAYFIFFQRR 1029
>gi|403365930|gb|EJY82756.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 828
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 178/395 (45%), Gaps = 56/395 (14%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ-------GQLVD 53
M GL GI N GNTC++N+ +QCLS + L + +H + ++ G++
Sbjct: 190 MDAGLCGIYNMGNTCFLNTAIQCLSAVQPLTDFFLGD---LHEQTINKTNPMGTSGEISI 246
Query: 54 ALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP 113
N +K +W + + +L L + QDAQEFL YLL L+E+
Sbjct: 247 YFANLLKDIWRGKEEKIYPQKLLKKLNEFAP------HQDAQEFLAYLLDCLHED----- 295
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQT----TEASVFSDIFVGQLRSSVRCSNCKRT 169
N + N KQ + + + +K Q+ + + + F G S R
Sbjct: 296 --LNRADKFNNLKKQ----KEIDHKKKIQSLTLGKQETEQQENFAG--YSEERQELIAYD 347
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG----G 225
+ +F S+ V L++ QL+S+++C C+ S ++ F LS+P+P G
Sbjct: 348 AWKDHLFNNRSIIV-----DLFQGQLKSALKCLTCQHMSIKFDSFMYLSVPIPSGYKGRN 402
Query: 226 GTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ- 280
TL EC+ +F E L C CK K +I +LP +LI+ KRF + +
Sbjct: 403 PTLEECVEEFTREEILDGDDKWKCPKCKINQRASKKIDIWKLPSILIVHLKRFEFHEKRY 462
Query: 281 -KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
K+ + FP L++ Y+S R + YDL AVSNH G GHY A+ +
Sbjct: 463 GKINDYVDFPLHNLNLTPYVSKLQRE---KPIYDLFAVSNHEGYLG-GGHYYAFTKHRQN 518
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
WY +DD +V + + V SA GAYIL Y +
Sbjct: 519 QLWYSFDDDIVKRISDEKVTSA----GAYILFYSK 549
>gi|426196486|gb|EKV46414.1| hypothetical protein AGABI2DRAFT_205603 [Agaricus bisporus var.
bisporus H97]
Length = 1106
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 174/408 (42%), Gaps = 83/408 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-----IPIHPDSKSQGQLVDALVNF 58
GL+G+ N GNTCY+N+ +QCLS T F NE+ I S+G++ A
Sbjct: 743 GLSGLKNLGNTCYMNAPIQCLSATVPFSR-FFNENRWKNAINYTNPFGSKGRITSAFAKL 801
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ M + ++ ++D + Q D+QEFL +L+ ++E+ +V ++
Sbjct: 802 LYQMRGQDLPYVTPIEFRKSICQLRSQYDNSDQHDSQEFLSFLMDGIHEDLNRVIVKPKW 861
Query: 117 NGSTYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ +++ A W++++ S+ D F GQ R
Sbjct: 862 TQTPEQEAELERLPPLIASEREWKEWKARNDSIIVDYFQGQFR----------------- 904
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLYECL 232
S ++C C +TST Y +F L LP+P G T+ +CL
Sbjct: 905 ---------------------SRLQCLTCHQTSTTYNVFSILQLPIPHGRNGRVTIEKCL 943
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPI 286
+ FN E L C CK + K + RLPPVL++ FKRF +N F+ K+ + +
Sbjct: 944 DALFNEEILEKDDAWDCPKCKTKRRASKTLSLARLPPVLLIHFKRFEANGRFSDKIDTFV 1003
Query: 287 KFPREGLDMEYYISA--------------------SGRRVESRYTYDLCAVSNHIGKTAL 326
++P + LD+ Y+ A R Y YDL AV+NH G
Sbjct: 1004 EYPMKSLDLTNYMPAPLPPGADKSELNGGLPMSLEDPRSQLPPYRYDLYAVTNHYGNLT- 1062
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT++ G W DD+ + V+ ++V AY+L Y+R
Sbjct: 1063 SGHYTSFVASRGG--WMYCDDSSIKSVEPKSV----INQKAYVLFYKR 1104
>gi|409081251|gb|EKM81610.1| hypothetical protein AGABI1DRAFT_35800 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1121
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 173/408 (42%), Gaps = 83/408 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-----IPIHPDSKSQGQLVDALVNF 58
GL+G+ N GNTCY+N+ +QCLS T F NE+ I S+G++ A
Sbjct: 758 GLSGLKNLGNTCYMNAPIQCLSATVPFSR-FFNENRWKNAINYTNPFGSKGRITSAFAKL 816
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ M + ++ ++D + Q D+QEFL +L+ ++E+ +V ++
Sbjct: 817 LYQMRGQDLPYVTPIEFRKSICQLRSQYDNSDQHDSQEFLSFLMDGIHEDLNRVIVKPKW 876
Query: 117 NGSTYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ +++ A W++++ S+ D F GQ R
Sbjct: 877 TQTPEQEAELERLPPLIASEREWKEWKARNDSIIVDYFQGQFR----------------- 919
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLYECL 232
S ++C C +TST Y +F L LP+P G T+ CL
Sbjct: 920 ---------------------SRLQCLTCHQTSTTYNVFSILQLPIPHGRNGRVTIERCL 958
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPI 286
+ FN E L C CK + K + RLPPVL++ FKRF +N F+ K+ + +
Sbjct: 959 DALFNEEILEKDDAWDCPKCKTKRRASKTLSLARLPPVLLIHFKRFEANGRFSDKIDTFV 1018
Query: 287 KFPREGLDMEYYISA--------------------SGRRVESRYTYDLCAVSNHIGKTAL 326
++P + LD+ Y+ A R Y YDL AV+NH G
Sbjct: 1019 EYPMKSLDLTNYMPAPLPPGADKSELNGGLPMSLEDPRSQLPPYRYDLYAVTNHYGNLT- 1077
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT++ G W DD+ + V+ ++V AY+L Y+R
Sbjct: 1078 SGHYTSFVASRGG--WMYCDDSSIKSVEPKSV----INQKAYVLFYKR 1119
>gi|47228612|emb|CAG07344.1| unnamed protein product [Tetraodon nigroviridis]
Length = 313
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 156/354 (44%), Gaps = 50/354 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G G+ N GNTC++N+++QCLS+T R+ L + + +L +A + +W
Sbjct: 1 GRIGLRNIGNTCFLNAIVQCLSHTRGLRDYCLLKRYRQEKFANQDAKLTEAFSQVLTGLW 60
Query: 64 SSGNL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP-DQYNGST 120
+ +N + + + F G QQDAQEFL +LL L+ E P +
Sbjct: 61 DENEVESAINPRQLYSVFKEAVPYFSGYSQQDAQEFLRFLLDKLHVEINRRPYVRRPVKE 120
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ ++ S A W+K + S D+F GQLRSS+ CS C S +++F +LS
Sbjct: 121 HEQIYARFRISEEAAVMWKKHLERDDSRIVDLFSGQLRSSLHCSVCSHHSNTFDVFCDLS 180
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
LP+P RSS R TL +CL+ F E
Sbjct: 181 LPIPK----------RSSGR------------------------DVTLKDCLDLFSQEEK 206
Query: 241 LHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLD 294
L C+ C + + K IQR P V+++ RF+++ K T + FP LD
Sbjct: 207 LDKENSPMCERCTRHTACTKRLSIQRFPQVIVIHLNRFTTSRWSISKSTVYVSFPLTNLD 266
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
+ Y V Y+L A+ NH+G T GHYTA C E W LY+D+
Sbjct: 267 LGPYGPVDYGPV----LYNLYAICNHVG-TVNMGHYTACCLDENG--WCLYNDS 313
>gi|345305034|ref|XP_001506997.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Ornithorhynchus anatinus]
Length = 368
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 158/378 (41%), Gaps = 70/378 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED--IPIHPDSKSQGQLVDALVNFMKM 61
G+ G+ N GNTCY+N+VLQCL++ L+ +H D +G++ AL +
Sbjct: 40 GVTGLRNLGNTCYMNAVLQCLASIAPLVEYFLSGKYVTALHRD---RGEVATALAYLLTD 96
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW + + LA+ F QQDAQEFL+++L AL+E K
Sbjct: 97 MWLGDADCVAPEVFRLAVGDRHPAFGKKSQQDAQEFLIFVLNALHEALK--------KPR 148
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
S++ S R K E+S+ S +F GQ
Sbjct: 149 RRKPSEKAASRRG----GKAAAGESSIVSQLFEGQ------------------------- 179
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGET 240
L V C C S E F LSLP+P +L ECL +FF +T
Sbjct: 180 -------------LSYDVVCLKCDSCSYKGETFTVLSLPIPSHYQCSLQECLERFFQQDT 226
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLD 294
L C YC + D + + P V+I KRF +K+ + I++P LD
Sbjct: 227 LRWNNQIYCSYCDAKQDAAVRATVVKAPNVVIFHLKRFECYGKMKRKLRTNIRYPLANLD 286
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ YI R+ Y+L AV NH G GHYTA C+ T W+ +DDT V V
Sbjct: 287 LSPYIYPPCRK---HPKYNLWAVVNHFGDLD-GGHYTALCKNTVTQSWFSFDDTRVCEVP 342
Query: 355 AQTVESAEAEHGAYILVY 372
V++A AY+L Y
Sbjct: 343 EAAVQTA----AAYLLCY 356
>gi|145483549|ref|XP_001427797.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394880|emb|CAK60399.1| unnamed protein product [Paramecium tetraurelia]
Length = 604
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 177/413 (42%), Gaps = 60/413 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSK--SQGQLVDALVNFM 59
G+ G+ N GNTCY NS + CLS+T + +L+ + I+ +SK S+GQ+ + +
Sbjct: 68 GVVGLKNLGNTCYFNSAIHCLSHTQPLLDYMLSRVFEKEINKNSKLGSKGQVTECFAQLL 127
Query: 60 KMMW----SSGNLVLN--------TKAILLALRSYTKKFD-------------GNQ---- 90
+W S G +N +K L + Y D NQ
Sbjct: 128 SDIWKDERSIGMSTINQGNDTKDKSKDKQLKQKQYENWVDPLRNTQGDLKQDVNNQHNQL 187
Query: 91 -QQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVF 149
Q+D QE L YLL ++E+ + N T + A W + S+
Sbjct: 188 EQEDCQELLSYLLDMIHEDLNRCKKKENIKEKDYTGDPK--EEWAAESWGEHLKINKSIV 245
Query: 150 SDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTST 209
D+F GQL+S+V C C S +E F L+LP+ + Q + S + +
Sbjct: 246 VDLFQGQLKSTVECKYCNYQSHKWEPFLFLNLPIKQQKQQQQQQQQQQSFQSKTLGSSQL 305
Query: 210 VYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLIL 269
+ EL+ ECL++F ET+ C C++ D K I +LP +LI+
Sbjct: 306 KQDTTCELT-----------ECLDQFQQDETIQWKCPKCQETRDCKKGIRIWKLPNILII 354
Query: 270 WFKRFSSNFTQ--KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALY 327
KRF Q K+T + FP LDM Y + V Y+L AV+ H G + Y
Sbjct: 355 HLKRFEYGTKQSGKITQKVNFPLNQLDMSPYCNQQNDTV-----YNLYAVAQHHG-SLQY 408
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPV-----DAQTVESAEAEHGAYILVYQRR 375
GHY + C+ +WY+Y+D V V Q E + AY+L YQ++
Sbjct: 409 GHYVSICKHRVDNQWYMYNDDAVLKVIQFQLQIQDPEKVIVDSQAYVLFYQKQ 461
>gi|113678342|ref|NP_001038361.1| ubiquitin carboxyl-terminal hydrolase 49 [Danio rerio]
gi|213627546|gb|AAI71546.1| Similar to Ubiquitin carboxyl-terminal hydrolase 49 (Ubiquitin
thiolesterase 49) (Ubiquitin-specific processing
protease 49) (Deubiquitinating enzyme 49) [Danio rerio]
gi|213627548|gb|AAI71548.1| Similar to Ubiquitin carboxyl-terminal hydrolase 49 (Ubiquitin
thiolesterase 49) (Ubiquitin-specific processing
protease 49) (Deubiquitinating enzyme 49) [Danio rerio]
Length = 649
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 176/431 (40%), Gaps = 99/431 (22%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI---------PIHPD------- 44
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D+ HP
Sbjct: 260 LAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEELLAKSNHPQVGALSAG 319
Query: 45 -----------------------SKSQGQLVDALVNFMKMMWSSGNLVLNTKAILLALRS 81
S+ Q L L ++MWS +++ A+L ++ +
Sbjct: 320 GGGGGGGVPSSLQSAEQKEPRSSSRQQVSLCHELHTLFRVMWSGRWSLVSPFAMLHSVWN 379
Query: 82 YTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKF 141
F G QQDAQEFL LL + +E + S+ K F K
Sbjct: 380 LIPAFRGYDQQDAQEFLCELLDKVQQELE-----------SDAPRKH---FLIPITQRKL 425
Query: 142 QTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRC 201
V + IF GQL S V C +CKR S E FW+LSL P Y + S
Sbjct: 426 SKQVLKVLNTIFHGQLLSQVTCLSCKRKSNTVEPFWDLSLEFPER----YHRMEKPSA-- 479
Query: 202 SNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN---TCQYCKKQ------- 251
+ C+R+ ++ E+ L KF E L C +C ++
Sbjct: 480 AACQRSCSLSEM------------------LAKFTETEALEGCIYACNFCNRKRRKSSHK 521
Query: 252 ----SDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLDMEYYISASGR 304
S+ K I RLP VL L KRF N +K+ + F + L+++ Y S S
Sbjct: 522 PLSLSEACKQLLICRLPQVLRLHLKRFRWSGRNHREKIGVHVAFD-QVLNIQPYCSCSDA 580
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
YTYDL AV H GK GHYTAYC G W +D+ ++ + V S +
Sbjct: 581 AAREAYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMNVCSVEEVCSTQ-- 638
Query: 365 HGAYILVYQRR 375
AYIL Y +R
Sbjct: 639 --AYILFYTQR 647
>gi|395503244|ref|XP_003755980.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
isoform 1 [Sarcophilus harrisii]
Length = 423
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 168/391 (42%), Gaps = 50/391 (12%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S G+ G+ N GNTCY+N++LQCL + L+ I K G+ A M
Sbjct: 49 SQGVTGLRNLGNTCYMNAILQCLCSITPLVEYFLSGKY-ITALQKDSGEAATAFAYLMTD 107
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MW + ++ + A+ F QQDAQEFL+Y+L L+E K
Sbjct: 108 MWLGDSDCVSPEVFRAAIGKIYPAFLKRTQQDAQEFLIYVLNELHEALK----------- 156
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRS-SVRCSNCKRTSTVY------- 173
K +G+ R W Q + + +++ VG S S+R + + Y
Sbjct: 157 -----KGIGTGRE---WR--QMDQGGILAEVQVGHEESLSLRDGSDGKRQGEYRRKKTQE 206
Query: 174 -----EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-T 227
+ + +++ L+E QL + C C+ + E+F LSLP+P +
Sbjct: 207 NGLSTKCYRKVASSESSIITRLFEGQLNYDIVCLKCENCTYKNEVFTVLSLPIPSECECS 266
Query: 228 LYECLNKFFNGETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQK 281
L ECL FF +TL C +C+ + D I + P +I KRF +K
Sbjct: 267 LQECLGCFFQQDTLTWNNQIHCAFCESKQDAAVRASIAKAPKTVIFHLKRFDCQGRVKRK 326
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + I +P LD+ YI R+ Y LC V NH G GHYTA+C+
Sbjct: 327 LRTDIHYPLNNLDLSPYIYPLFRK---HPKYSLCGVVNHFGDLD-GGHYTAFCKNTVNQT 382
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
WY +DDT V + V++A AY+L Y
Sbjct: 383 WYSFDDTRVCEIPDSAVQTA----AAYLLFY 409
>gi|219119288|ref|XP_002180407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407880|gb|EEC47815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 348
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 170/391 (43%), Gaps = 63/391 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFM 59
G+ G+ N GNTC++NS LQCLS T + L D I H + G+L A M
Sbjct: 1 GVVGLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINQHNVLGTGGKLATAYAELM 60
Query: 60 KMMW-----SSGNLVLNTKAIL-----LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA 109
K +W SG ++ + + +L S+ +F G Q DAQE L +LL ++E+
Sbjct: 61 KELWLQAAPVSGYTKISARVVKPTRFKSSLESFAPQFLGTSQHDAQELLSFLLDGIHEDL 120
Query: 110 KVVPDQ-YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
+P + Y + + + + A W+ + + S+ DIF GQLR+++ C C+
Sbjct: 121 NRIPKKPYIEDRDCDGTHDERDAIEA---WKNYLRRDKSLVVDIFQGQLRNTLTCLTCRH 177
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
+ +E F LSLP+ TL +C LR + R + Y
Sbjct: 178 VNVRFEPFMYLSLPLNDDSHTLDDC-LRLYLAEERLVRENQWY----------------- 219
Query: 229 YECLNKFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN----FTQKVTS 284
C C+ D K ++ +P +LI+ KRF N K +
Sbjct: 220 ----------------CSVCQTHRDATKKTDLWIVPAILIVHLKRFKFNEYGQLGSKNNA 263
Query: 285 PIKFP-REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
I++P + D+ + + G YDL AVSNH+G GHYTAY WY
Sbjct: 264 CIRYPVGDSWDLSGVVCSRG---SEEPLYDLYAVSNHVGDLG-GGHYTAYSLNRFDDHWY 319
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
++DT +D +T++ + AY+L Y R
Sbjct: 320 EFNDTTCRKIDDRTLQGNSS--SAYLLFYNR 348
>gi|340375672|ref|XP_003386358.1| PREDICTED: hypothetical protein LOC100638851 [Amphimedon
queenslandica]
Length = 1002
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 170/383 (44%), Gaps = 58/383 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N+ N+CY+N+VLQC+S+T + L+ + P S+ ++ A +F+K MW
Sbjct: 660 GLIGLKNSKNSCYLNAVLQCVSHTTKLTDYFLSGEAKKEPGYSSK--IIGAYNSFLKDMW 717
Query: 64 SSGNLVLNTKAIL-----LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
NTKA+L AL N Q+DAQEFL YLL L++ P
Sbjct: 718 MPKE---NTKAVLPRRIRAALTPSIDILQENGQEDAQEFLQYLLPCLHDHINKPPLDSPR 774
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ ++ + + +F S FS++F+GQ +SS+ C C RTS+ E FW
Sbjct: 775 TKALKRNNGLISITPPVPISSEFM---KSCFSELFMGQTKSSLTCHKCSRTSSSVESFWN 831
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+P G L+ + Y F TL +C F
Sbjct: 832 LSLPLPTKG--LF-----------------SKYVSF------------TLSDCFRLFAAE 860
Query: 239 ETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREG 292
E L C C + K E+Q+ P IL KRFS K+TS +K P
Sbjct: 861 EKLIKENRPRCSKCGTLQNFSKKLEVQKFPESFILHLKRFSFQDGHLVKLTSAVKVPTTL 920
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
E I+A +S Y Y+L V +H G GHY A C+ G+WY ++D +VS
Sbjct: 921 SVKE--IAADKESAKSFY-YELYGVIHHSGYLD-GGHYQADCKH--NGKWYNFNDDIVS- 973
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
T E Y+L Y+++
Sbjct: 974 -KKSTAEITVPSSSPYLLFYEKK 995
>gi|403357049|gb|EJY78138.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 490
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 167/373 (44%), Gaps = 52/373 (13%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++NS+LQC+ +P + L + + +L DA + +K +
Sbjct: 160 GLRNIGNTCFLNSILQCIFASPYLNDYFLGQ--YQKGSGVGKARLADAYHSLIKQVKQGH 217
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ--YNGSTYSNT 124
++ + A+ +F G QQDAQEFL +LL L+EE V + Y +
Sbjct: 218 ETTISPTDLKYAVSKVAPQFSGYGQQDAQEFLRFLLDGLHEELNRVRKKPAYKEMDFDKL 277
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
+ Q ++ +W+ + + S+ +D+F GQL + + C +C S ++ F +LS+ +P
Sbjct: 278 PADQ----QSEKWWQYNKERDDSIITDLFTGQLMNKIECQSCGYCSNAFDNFQDLSVSIP 333
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
RS VR + K +L ECL F E++
Sbjct: 334 -----------RSGVRITGYK---------------------SLDECLESFIKAESMETC 361
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYI 299
C CKK + K + R P ++++ KRF SS +KV + I P++ +D+ Y
Sbjct: 362 GYKCSKCKKVDNFKKEMTLYRFPKIMVIHLKRFYNSSMRREKVNTTITIPQK-IDLSSYA 420
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
S + + Y L +S+H G T GHY G+WY +D+ V + +E
Sbjct: 421 PHSNHESKKKAKYQLYGISHHSG-TLYGGHYIGEAFNFDDGKWYQCNDSWVKAC-SPDLE 478
Query: 360 SAEAEHGAYILVY 372
SA AY+L Y
Sbjct: 479 SAS----AYVLFY 487
>gi|388581444|gb|EIM21752.1| cysteine proteinase, partial [Wallemia sebi CBS 633.66]
Length = 454
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 154/361 (42%), Gaps = 76/361 (21%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAF----------RNVLLNEDIPIHPDSKSQGQLVD 53
GL G+ N GNTCY+NS LQCLS T F R V N + + QG+L +
Sbjct: 137 GLTGLKNLGNTCYMNSTLQCLSATIPFARFFTSGVWRRFVNHNNKMGM------QGRLAE 190
Query: 54 ALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP 113
+ + MW ++ + ++ +F G Q DAQEFL +LL L+E+ V
Sbjct: 191 SFSQILTHMWREQYTFISPMTFRKNICTFANQFIGTDQHDAQEFLSFLLDGLHEDLMVGE 250
Query: 114 DQYNGSTYSNTS----SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
Q +N + +GS R W++++ SV D F GQ R+ + C +C +T
Sbjct: 251 GQKPTEDTNNDALESLPTPLGSERE---WKRYKQMNDSVIVDYFQGQFRNRMECMSCHKT 307
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
ST Y F LSLPVP +L+ SV +L
Sbjct: 308 STTYNSFMYLSLPVP-------TKKLKGSV---------------------------SLT 333
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVT 283
CL+ F E + C CK +K I RLPP+L++ KRFS N F+ K+
Sbjct: 334 TCLDSFLKDEVMEKDNAWNCPNCKVARKSIKRLSIARLPPILLIQLKRFSFNGPFSDKIE 393
Query: 284 SPIKFPREGLDMEYYISASGRRV------------ESRYTYDLCAVSNHIGKTALYGHYT 331
+ + +P + ++ Y + + Y+L V+NH G + GHYT
Sbjct: 394 TLVTYPLKNFNLTPYTPHMANQYYGITNKDDPTLQHPPFIYELYGVTNHYG-SLQSGHYT 452
Query: 332 A 332
A
Sbjct: 453 A 453
>gi|428170656|gb|EKX39579.1| hypothetical protein GUITHDRAFT_89035 [Guillardia theta CCMP2712]
Length = 406
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 162/370 (43%), Gaps = 57/370 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHP-------DSKSQGQLVDALV 56
GL+G+ N GNTCY+N+ +Q L +TP+F ++ I P + +Q ++V +L
Sbjct: 56 GLSGLPNLGNTCYLNAPVQVLVHTPSFAGFFVDCADFIPPRLEVGNSRAITQRRMVHSLA 115
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-AKVVPDQ 115
+ + +W G V + + + + G QQDAQEFL L L+EE + P
Sbjct: 116 DIVYQVWDEGLKVASPHNFVRDVLDLNPDYRGLGQQDAQEFLRRTLDVLHEELQESTPSP 175
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
NG+ S + + H EK S+ DIF G L S V+C++C + S E
Sbjct: 176 ENGNAESKS--------KETHRHEK--RLHNSIVLDIFAGVLISEVKCNHCGKVSVTEEP 225
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
+ S+ +P + R S+C + P G Y+
Sbjct: 226 VLDQSISIPSKKARQRLLSAHKNYRASDC---------LLQYYEPEHLTGNDKYK----- 271
Query: 236 FNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKR------FSSNFTQKVTSPIKFP 289
C++C + D K + + P VL L KR F +N K++ I+FP
Sbjct: 272 ---------CEHCDQFRDCTKKLSLLKPPEVLTLHLKRFRYESLFGNNMGTKISEHIQFP 322
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALY-GHYTAYCRREGTGRWYLYDDT 348
+GLDM +I + YDL AV H G AL+ GHY AY R G+W+ ++D+
Sbjct: 323 IKGLDMRPFIKENA-------IYDLLAVIEHRG--ALHGGHYIAYIRNNSDGKWFEFNDS 373
Query: 349 VVSPVDAQTV 358
V+ + V
Sbjct: 374 QVNTISGADV 383
>gi|395822175|ref|XP_003784399.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Otolemur garnettii]
Length = 375
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ + K ++ A M MW
Sbjct: 44 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-MTALQKDCSEVATAFAYLMTDMW 102
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + F QQDAQEFL+Y+L L+E K + +Y
Sbjct: 103 LGDSDCVSPEIFRSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALK---KYHRRRSYEK 159
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S ++ K E S+ + +F GQL S+ C
Sbjct: 160 RSIQRCC--------RKVIANETSIITRLFEGQLNYSIVC-------------------- 191
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
++C NC + E+F LSLP+P +L +CL FF +TL
Sbjct: 192 ---------------LKCENCTYRN---EVFTVLSLPIPCEYECSLQDCLQCFFQQDTLT 233
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
C +C+ + I + P +++ KRF +K+ + I +P LD+
Sbjct: 234 WNNQIRCAFCETNQETAVRASISKAPKIIVFHLKRFDIQGMMKRKLRTNIHYPLTNLDLT 293
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 294 SYICPIFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 349
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 350 SVQTA----TAYLLFY 361
>gi|397565680|gb|EJK44726.1| hypothetical protein THAOC_36712, partial [Thalassiosira oceanica]
Length = 977
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 176/392 (44%), Gaps = 75/392 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N NTC++NS LQCL++T R+ L+ +D+ + G+L + + M
Sbjct: 244 GLGNLVNTCFMNSTLQCLAHTTPLRDYFLSGRFRDDLNTDNPLGTGGELTREFASLLTEM 303
Query: 63 WSSGNLVLNTKAILL--ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
W + + IL L + +F G+ Q D+QE +YLL A++E+ +V D+
Sbjct: 304 WKGDDTTI---PILFKTVLGKHADQFFGHDQHDSQELAIYLLDAVHEDTNLVRDK----- 355
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT-STVYEIFWEL 179
LHY E + SD+ + + + KR S ++ F
Sbjct: 356 --------------LHYIENPEL--GPEVSDVVASE---TAWADHLKRNVSFIHNHFMG- 395
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-------TLYECL 232
Q++S + C K TST ++ LS+P+P GG TL +C+
Sbjct: 396 --------------QIKSRLECPFTKNTSTTFDPTMYLSVPIPRGGNGNYPNNVTLMDCI 441
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQ---KVTS 284
K+ E L ++ C CK K + R PP+LI+ KRF S+ TQ K+ +
Sbjct: 442 YKYCEREQLDDSEPWYCSKCKDHVRAWKKISVYRTPPILIIHLKRFHVSSETQLRVKIDT 501
Query: 285 PIKFPREGLDMEYYISASGRRVES--RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
+ FP GLD+ ++ G E+ YD AVSNH G GH TAYC +E G W
Sbjct: 502 LVNFPLVGLDLRNFV---GHEEENGIEPVYDCYAVSNHFGGLG-GGHCTAYC-KEDDGTW 556
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
YDD V+ ++ V S E AY+L Y R
Sbjct: 557 SNYDDWRVTEINENEVVSPE----AYVLFYIR 584
>gi|25152734|ref|NP_510570.2| Protein USP-33 [Caenorhabditis elegans]
gi|22265887|emb|CAB01885.2| Protein USP-33 [Caenorhabditis elegans]
Length = 716
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 175/388 (45%), Gaps = 37/388 (9%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP-------IHPDSKSQGQLVDALV 56
GL G N GNTCY+N+VLQ L + F L+ E IP H K+ Q+ L
Sbjct: 180 GLLGYLNFGNTCYMNAVLQLLGHCSPFTQYLI-ELIPPGGWSNCSHDIPKTAIQMALDLR 238
Query: 57 NFMKMMWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
N M+S L L+ I+ +R+ F+ QQQDA EF+ LL L+ + K +
Sbjct: 239 N----MYSDFPLPYLSPWKIITCVRNEMPGFECFQQQDASEFMRNLLDILDRDLKTCSEY 294
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ +T + ++ A++ + S IF G L + ++C +C S E
Sbjct: 295 HRTNTLIEMGNPEMDYAIAMN-----APHTKTAISAIFQGVLENQIQCHSCGFRSRTIEN 349
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECL 232
F +LS+P+ G E + TS+ E + V G +L CL
Sbjct: 350 FLDLSIPIV-GENEFEEMYASKKLDTPKAPCTSSNIEDGQDPGFLVHQGAFNKTSLESCL 408
Query: 233 NKFFNGETLHNTCQY----CKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPI 286
++FF TL + QY C+ D K + RLP V+I+ KRF + KV +
Sbjct: 409 DRFFQNSTLQDDNQYSCSKCEVLVDATKSTKAHRLPEVIIIQLKRFRHTMFGSCKVGKVV 468
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+FP D + ++ + YDL H G++ +GHY +YCR E +WY +D
Sbjct: 469 EFPLRSQDFGRWTTSGEPAL-----YDLVGFVVHEGRSLEFGHYVSYCRHEQDNQWYKFD 523
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQR 374
D VV+ DA V A+ YIL+Y++
Sbjct: 524 DMVVTRCDATQV----AKSQPYILMYRK 547
>gi|149692387|ref|XP_001501949.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Equus caballus]
Length = 373
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 158/376 (42%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I K ++ A M MW
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-ITALQKDCSEVATAFAYVMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + F QQDAQEFL+Y+L L+E K Y
Sbjct: 101 LGDSDCVSPEIFRSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALK---------KYHR 151
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S + GS K E S+ + +F GQ
Sbjct: 152 RRSCEKGSVPRC--CRKAIANETSIITRLFEGQ--------------------------- 182
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-GGGTLYECLNKFFNGETL- 241
L SV C C+ + E+F LSLP+P +L +CL FF +TL
Sbjct: 183 -----------LNYSVTCLTCENCTYKNEVFTVLSLPIPSEAQCSLQDCLQCFFQQDTLT 231
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P +I KRF +K+ + I +P LD+
Sbjct: 232 WNNRIHCSFCETKQETAVRASISKAPKTVIFHLKRFDILGTMKRKLRTNIHYPLTNLDLT 291
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 292 PYICPIFRK---HSKYNLCAVVNHFGDLD-GGHYTAFCKNSVTHAWYSFDDTRVSEIPDT 347
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 348 SVQTA----TAYLLFY 359
>gi|426233320|ref|XP_004010665.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Ovis aries]
Length = 378
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 163/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I+ K ++ A M MW
Sbjct: 47 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-INALQKGCSEVATAFAYVMTDMW 105
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + + AL + F QQDAQEFL+Y+L L+E K + +Y
Sbjct: 106 LADCDCVSPEILRSALGNLYPVFMKKTQQDAQEFLIYVLNELHEALK---KYHRRKSYEK 162
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S + Y K E+S+ + +F GQL S+ C
Sbjct: 163 RSIPR--------YCRKMIANESSIITRLFEGQLSYSIVC-------------------- 194
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
++C NC + V+ I +SLP+P +L +CL FF +TL
Sbjct: 195 ---------------LKCENCTYKNEVFTI---ISLPIPSKYECSLQDCLQCFFQQDTLT 236
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P ++ KRF +K+ + I +P LD+
Sbjct: 237 WNNQIHCSFCETKQETAVRATISKAPKTIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLT 296
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+ + T WY +DDT +S +
Sbjct: 297 PYICPIFRK---HPKYNLCAVVNHFGDLD-GGHYTAFSKNSVTQAWYSFDDTRISEIPDT 352
Query: 357 TVESAEAEHGAYILVY 372
V++A AY+L Y
Sbjct: 353 AVQTA----AAYLLFY 364
>gi|358367203|dbj|GAA83822.1| ubiquitin C-terminal hydrolase [Aspergillus kawachii IFO 4308]
Length = 1100
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 174/395 (44%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS LQCLS T ++ + SQG + N ++ +W
Sbjct: 737 GLTNFGVTCYMNSTLQCLSATVVLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 796
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 797 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 844
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 845 --NWQRTPLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI---------- 886
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL + E L
Sbjct: 887 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSSGTGDIYQCLRSYCQEEMLS 942
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK + K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 943 GDEVWKCPYCKCERVATKQIIITRAPQILVVHFKRFSASKTQTARKIHTPIDFPLHGLRM 1002
Query: 296 EYYISASGRRVESR-------------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
+ ++ ++ + ++ +TYD V HIG + GHY + R W
Sbjct: 1003 DDFVFSAYNQGQTNGLPHDPIAAMVPPFTYDAYGVLRHIGSSMGSGHYISLVRDAQRQCW 1062
Query: 343 YLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
+DD T +P D ++ + + E AYI+ Y+R
Sbjct: 1063 RRFDDEWVTDFNPRDLRSKDRLQNEQ-AYIVFYER 1096
>gi|121710222|ref|XP_001272727.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
1]
gi|119400877|gb|EAW11301.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
1]
Length = 1111
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 174/399 (43%), Gaps = 66/399 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS +QCLS T ++ + SQG + N ++ +W
Sbjct: 744 GLTNFGVTCYMNSTIQCLSATIMLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 803
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 804 KNDVEVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 851
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 852 --NWQRTPLRPLTFEEEMQRERMPVPKVSRIEWDRY------CHREESFI---------- 893
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-GGGTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL + E L
Sbjct: 894 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSTGTGDIYQCLRSYCQEEMLS 949
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK + + K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 950 GDEVWKCPYCKCEREATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLHGLRM 1009
Query: 296 EYYI-------SASGRRVES----------RYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
+ ++ S+ GR + +TYD V HIG + GHY + R
Sbjct: 1010 DDFVIYPNLGASSDGRVAGAPQEMISATMPPFTYDAYGVLRHIGSSMGSGHYISLVRDAQ 1069
Query: 339 TGRWYLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
W +DD T +P D + + + E AYI+ Y+R
Sbjct: 1070 RQCWRKFDDDRATDFNPRDMRFKDRLQNEQ-AYIVFYER 1107
>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 847
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 171/408 (41%), Gaps = 77/408 (18%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNV--------LLNEDIPIHPDSKSQGQLV 52
+ GL G+ N GNTC++N+ +QCLS+ + LLN P+ + G +
Sbjct: 218 LDSGLTGLYNMGNTCFLNTAVQCLSSVQPLTDFFIGNLHKKLLNTTNPMG----TGGDVT 273
Query: 53 DALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV 112
N +K +W + L L + QQQDAQEFL Y+L +L+E+
Sbjct: 274 LRYANLIKDIWQGKEEKIYPAQFLKTLSKHAPHLVCGQQQDAQEFLAYILDSLHEDLNRA 333
Query: 113 PD-----QYNGSTYSNTSSK------------------QVGSFRALHYWEKFQTTEASVF 149
Q S SSK ++ +A W+ S+
Sbjct: 334 DKLTNMKQKREKELSKKSSKNEDEDSLLDKLLDTDPSEELQEHQAYESWKDHLLNNRSII 393
Query: 150 SDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTST 209
D+F GQL+S+++C C S ++ F L++P+P ++ S + C T
Sbjct: 394 VDLFQGQLKSTLKCLVCNHMSIKFDSFMYLTIPIPQ--------KMMSDPKLEECVEEFT 445
Query: 210 VYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLIL 269
EI + NK+ C C K K +I +LP VLI+
Sbjct: 446 KEEIL---------------DGQNKW--------KCPKCDKFQRATKKIDIWKLPSVLII 482
Query: 270 WFKRFSSNFTQ--KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALY 327
KRF N + K+ ++FP + LD+ Y+S R + YDL AV+NH G
Sbjct: 483 NLKRFEFNQKKKAKINDLVEFPLKNLDLTPYVSKLQRE---KPIYDLFAVANHEGYLT-G 538
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPV-DAQTVESAEAEHGAYILVYQR 374
GHY +Y + +WY +DD VV + + + V S E AYIL Y +
Sbjct: 539 GHYYSYSKHRNNQQWYYFDDEVVKKIKNEEKVVSKE----AYILFYSK 582
>gi|12854228|dbj|BAB29966.1| unnamed protein product [Mus musculus]
Length = 390
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I K ++ A M MW
Sbjct: 43 GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKY-ITALKKDCSEVTTAFAYLMTDMW 101
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + L A+ S F QQDAQEFL+Y+ LNE + +
Sbjct: 102 LGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYV---LNE----LHEALKKHCRRR 154
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ K+ G K E S+ + +F GQ
Sbjct: 155 VNEKRTGQ----SCCRKVPAQEISIITRLFEGQ--------------------------- 183
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
L S+ C C+ + E+F LSLP+P +L +CL FF +TL
Sbjct: 184 -----------LSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQQDTLT 232
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDME 296
C +C+ + + I ++P +++ FKRF T +K+ + I +P LD+
Sbjct: 233 WSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDIHYPLTNLDLT 292
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 293 PYICPVFRK---HPMYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 348
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 349 SVQTA----TAYLLFY 360
>gi|345560761|gb|EGX43880.1| hypothetical protein AOL_s00210g327 [Arthrobotrys oligospora ATCC
24927]
Length = 1191
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 168/408 (41%), Gaps = 80/408 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK----SQGQLVDALVNFM 59
G G+ N GNTCY+NS++QC+S T L+ H + + S+G +A N
Sbjct: 823 GTTGLKNLGNTCYMNSIIQCMSGTVPLARYFLSGFYKGHLNRENRLGSRGIFAEAFANLN 882
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+ +W ++ I +F G QQDAQE+L + L L+E+ +
Sbjct: 883 RNLWEETYAFVSPVTIKDISGRLNSQFRGKDQQDAQEYLEFFLDYLHEDLNANAGKPRLR 942
Query: 120 TYSNTSSK-------QVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
++ K Q+ S+ + WE++ T S+ F GQ RS ++C C TST
Sbjct: 943 ELTDDEEKRREELPVQLASY---YEWERYVHTNLSMIVKWFQGQFRSRLKCLKCGHTSTT 999
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
Y F LSLP+P G P G TL +C+
Sbjct: 1000 YSPFMYLSLPIPAKAG----------------------------------PNGCTLKDCM 1025
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPI 286
++F E L C CKK K I R+P VLI+ KRFS++ + KV + +
Sbjct: 1026 DEFTKEEILDGDDAWHCPVCKKPRKASKQLSISRMPVVLIIHLKRFSNHGMWRDKVNTLV 1085
Query: 287 KFPREGLDMEYYISAS--------------GRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
F + +D+ Y+ G V + Y L AV+NH G + GHYTA
Sbjct: 1086 NFGK-SVDLTRYVPPPLDPKDVPGGMGLPMGSEVTPPFYYSLYAVTNHYG-SLTSGHYTA 1143
Query: 333 Y------CRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ G W+ +DDT + ++ V AYIL + R
Sbjct: 1144 FVRVGGGTGGREGGVWHRFDDTKATKMETDDV----VNRNAYILFWVR 1187
>gi|145509625|ref|XP_001440751.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407979|emb|CAK73354.1| unnamed protein product [Paramecium tetraurelia]
Length = 481
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 171/396 (43%), Gaps = 66/396 (16%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
+S G+ G+ N GNTC++NSVLQCL N PAF N D +SK+ + + +
Sbjct: 128 VSKGICGLRNIGNTCFMNSVLQCLLNLPAFNEHFFNGDYLKDMNSKN-SSVPNEYSKLVS 186
Query: 61 MMWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALN---------EEAK 110
+ S+ N + I A+ + F G QQDAQEFL+ LL L+ K
Sbjct: 187 TIRSTPNFQSVAPYGIKSAVENVMPCFRGYAQQDAQEFLVALLDGLSLGLNRVKSKSTYK 246
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ D NG T + S + +WE ++ E S+ D F GQL +++CS C S
Sbjct: 247 EMNDNLNGRTLQDLSKE---------WWEYSKSRENSLVLDYFQGQLLHTIKCSYCNHNS 297
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
++ F + SL + ++I ++ L
Sbjct: 298 YAFDTFLDTSLAF------------------------TRAFKILEDMDLD---------R 324
Query: 231 CLNKFFNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIK 287
L+K+ ET+ + C CKK + + + I RLP +L+ KRF + K+ +K
Sbjct: 325 LLDKYVIEETIDDYYCSKCKKHQKVKRKFTIWRLPHILMFHIKRFDYRRFSSDKLNHRVK 384
Query: 288 FPREGLDMEYYISASGR-------RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
FP E LDM +I S + + Y LC + NH G T GHYTA
Sbjct: 385 FPLE-LDMTKFIQDSRKTFLILVDQSTKNCQYSLCGIVNHSG-TLYGGHYTADSLNPFNL 442
Query: 341 RWYLYDDTVVSPVDA-QTVESAEAEHGAYILVYQRR 375
+WY Y+D+ V +D Q + YIL Y R+
Sbjct: 443 KWYRYNDSDVREIDVKQQRYDTDGSSSPYILFYARK 478
>gi|405968000|gb|EKC33109.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
Length = 1129
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 165/387 (42%), Gaps = 96/387 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNFM 59
L G+ N GNTCY+NS +Q +SQ G++ D +
Sbjct: 807 ALTGLRNLGNTCYMNSTIQ-----------------------ESQLGYYGEIADDFSVII 843
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNE------EAKVVP 113
+ +WS + + + + F G QQD+ +FL +L+ L+E + +P
Sbjct: 844 RALWSGQYKCITPRDFKYVVGKHNPDFAGTTQQDSHDFLTFLMDGLHEGLNRVKKRPEIP 903
Query: 114 DQYNGSTYSNTSSKQVGSFRALHY-WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
+Q N ++G +A W+ Q S+ ++F GQ
Sbjct: 904 EQDND---------KMGDSQAAELAWKHHQLCNESIIVELFQGQ---------------- 938
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYEC 231
L+S++ C +C++ S ++ F L+LP+PP +L EC
Sbjct: 939 ----------------------LKSTLMCLHCQKMSVNFQAFMFLTLPIPPSSRCSLGEC 976
Query: 232 LNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSP 285
L F E L + C CK D VK +I RLP +L++ RF + +K+ S
Sbjct: 977 LKLFLKEERLTGSSRWRCPRCKVDRDAVKKIDIWRLPRILLIGLNRFVYKGQWREKINSF 1036
Query: 286 IKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
+ FP LD+ Y+ + ++S +Y L A SNH G T GHYTAYCR T +W+ Y
Sbjct: 1037 VDFPTRNLDLNPYLEGP-KSIKS--SYRLYATSNHSG-TLDGGHYTAYCRNPCTEKWFKY 1092
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVY 372
DD VS + V S+ AY+L Y
Sbjct: 1093 DDDHVSEMKESDVRSS----LAYVLYY 1115
>gi|392576694|gb|EIW69824.1| hypothetical protein TREMEDRAFT_30214 [Tremella mesenterica DSM 1558]
Length = 1221
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 170/380 (44%), Gaps = 77/380 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
GL G+ N G TCY+NS +QCLS T F + L+ + + + ++G L A + +
Sbjct: 874 GLTGLKNLGATCYMNSTIQCLSATYPFARLFLDGGYKKMVNVSNPLGTKGVLAKAFGDLL 933
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDG-NQQQDAQEFLLYLLAALNEE---------- 108
+W L K ++ ++ +F N+Q D+QEFL ++L L+E+
Sbjct: 934 HALWEEQYHFLTPKTFRASITAFAPQFTATNEQHDSQEFLSFVLDGLHEDLNRVLVKPPP 993
Query: 109 AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
++ P++ + T S +V S + W+ ++ + S D+F GQ R+ + C C +
Sbjct: 994 VEMTPEREHAL---ETLSPEVASEKE---WQIYRMRDDSFIVDLFQGQYRNRLECLTCGK 1047
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
TST Y+ F +SL +P G L +
Sbjct: 1048 TSTTYDAFMYMSLQIPRGKNKL------------------------------------VV 1071
Query: 229 YECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---FTQK 281
E +++F E + C CK K I RLPPVL++ KRFS+ F K
Sbjct: 1072 QELIDEFVETEIIDKDDAWYCPRCKVPRRASKTLTIARLPPVLLIQLKRFSTKDGLFWDK 1131
Query: 282 VTSPIKFPREGLDMEYYIS---ASGR------RVE-SRYTYDLCAVSNHIGKTALYGHYT 331
+ I FP + LD+ Y+ ++GR R + + + YD AVSNHIG T GHYT
Sbjct: 1132 SDAHIVFPLKNLDLSRYVPPRMSTGREDLGDPRTQVAPFKYDCYAVSNHIG-TLSSGHYT 1190
Query: 332 AYCRREGTGRWYLYDDTVVS 351
AY + + W +D+ ++
Sbjct: 1191 AYVK--SSKGWMFCEDSRIT 1208
>gi|67523231|ref|XP_659676.1| hypothetical protein AN2072.2 [Aspergillus nidulans FGSC A4]
gi|40745748|gb|EAA64904.1| hypothetical protein AN2072.2 [Aspergillus nidulans FGSC A4]
gi|259487441|tpe|CBF86122.1| TPA: ubiquitin C-terminal hydrolase, putative (AFU_orthologue;
AFUA_2G04720) [Aspergillus nidulans FGSC A4]
Length = 1022
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 172/399 (43%), Gaps = 66/399 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+AN G TCY+NS +QCLS T +++ + SQG + N ++ +W
Sbjct: 655 GLANFGVTCYMNSTIQCLSATVLMSKFFIDDRFRFYVQKNWKGSQGVMPGLYANLIRSLW 714
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ V
Sbjct: 715 KNDVQVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLHEDLNV------------ 762
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q V + R C R +
Sbjct: 763 --NWQRTQLRPLTFEEEMQRERMPVAKVSKIEWDRY------CHREESFI---------- 804
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNGETLH 242
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL + E L
Sbjct: 805 ----SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPASGKGDIYQCLRSYCQEEMLS 860
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C YCK + K I R P +L++ FKRFS++ TQ K+ +PI FP GL M
Sbjct: 861 GDEVWKCPYCKCERVATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLHGLRM 920
Query: 296 EYYISASGRR-----------------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
+ ++ + ++ E +TYD V H+G + GHY + R
Sbjct: 921 DDFVFSQPKQTSNGDGPSSGPQDPTSATEPPFTYDAYGVLRHLGSSMGSGHYISLVRDAS 980
Query: 339 TGRWYLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
W +DD T P D + + E AYI+ Y+R
Sbjct: 981 RQCWRKFDDGRATDFIPRDLPFKDRLQNEQ-AYIVFYER 1018
>gi|403414385|emb|CCM01085.1| predicted protein [Fibroporia radiculosa]
Length = 658
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 157/361 (43%), Gaps = 81/361 (22%)
Query: 6 NGIANAGNTCYINSVLQCLSNTPAFRNVL--------LNEDIPIHPDSKSQGQLVDALVN 57
+G+ N GNTCY+NS +QCLS T F +N P+ ++G L A N
Sbjct: 329 SGLKNLGNTCYMNSTIQCLSATVPFARFFTEGRWKSAINMINPM----GTKGNLAQAFAN 384
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-------AK 110
++ + S + L+ A +L + +FDG +Q D+QEFL +LL L+E+ A+
Sbjct: 385 ILQDLQQSESQCLSPGAFRRSLCRHAPQFDGTEQHDSQEFLHFLLDGLHEDLNRVLVRAQ 444
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ P + + Q+ S + W+ +Q S+ D F GQLR+ + C C +TS
Sbjct: 445 IDPTPEREAELERLPT-QIASEQE---WQIWQRRNDSLVVDFFQGQLRNRLECLTCHKTS 500
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
T Y F L+LPVP G +L +
Sbjct: 501 TTYNTFMYLTLPVPTRRGL----------------------------------SKVSLSQ 526
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS--NFTQKVTS 284
CL+ F E + + C +CK K + RLPPVL+++ KRFSS +FT K+ +
Sbjct: 527 CLDAFVKEEVMEESDAWNCPHCKTLRKATKNLSLSRLPPVLLIYLKRFSSKGHFTDKIET 586
Query: 285 PIKFPREGLDMEYYI----------------SASGRRVESRYTYDLCAVSNHIGKTALYG 328
+ +P LD+ Y+ G ++ Y YDL V+NH G T G
Sbjct: 587 FVDYPVRDLDLTNYMPLPLPPGVDGGPHMPRDDPGVQIPP-YRYDLYGVTNHYG-TLSSG 644
Query: 329 H 329
H
Sbjct: 645 H 645
>gi|390594435|gb|EIN03846.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1186
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 163/406 (40%), Gaps = 86/406 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GNTCY+NS +QCL+ T F L+ I + ++G + ++ +
Sbjct: 826 GLKNMGNTCYMNSTIQCLNATVPFARFFLDGYWQHAINMVNPLGTKGAVTAGFATLLRDI 885
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
L + +FDG++Q D QEFL LL +L+E+ + TY
Sbjct: 886 NQGAVSYLTPVKFRADFIRHANQFDGSEQHDCQEFLSTLLDSLHEDMNRI---LQKPTYQ 942
Query: 123 NTSSKQVGSFR------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
T ++ R + W ++ S+ D F GQ R+ +
Sbjct: 943 PTPERERELERLPQQIASEQEWHIYRMRNDSLIVDFFQGQFRNRL--------------- 987
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG---GGTLYECLN 233
+C C+ TST Y F L+LPVP G TL +CL+
Sbjct: 988 -----------------------QCLTCQNTSTTYNTFMYLTLPVPTGRLSKVTLQQCLD 1024
Query: 234 KFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIK 287
F E + + C +CK K + RLPP+L++ KRFSS K+ + +
Sbjct: 1025 AFVKEEIMEKSDAWNCPHCKALRRATKQLSLSRLPPILLIHLKRFSSKGAAADKIETFVD 1084
Query: 288 FPREGLDMEYYISA-------------------SGRRVESRYTYDLCAVSNHIGKTALYG 328
FP +GLD+ Y+ RR Y YDL AV+NH G + G
Sbjct: 1085 FPTKGLDLTNYMPPPLPPGVDNGIPGAQQLSLDDPRRQIPPYKYDLYAVTNHFGSLS-SG 1143
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
HYTA+ +W DD+ V D + V AY+L Y+R
Sbjct: 1144 HYTAFI--SSRNQWLYCDDSRVVQADPKEV----VGKPAYVLFYKR 1183
>gi|291290972|ref|NP_001073699.2| ubiquitin specific peptidase 50 [Bos taurus]
Length = 378
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 161/376 (42%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I+ K ++ A M MW
Sbjct: 47 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKY-INALQKDCSEVATAFAYVMTDMW 105
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + F QQDAQEFL+Y+L L+E K + Y
Sbjct: 106 LGDSDCVSPEIFRSALGNLYPVFMKKTQQDAQEFLIYVLNELHEALK---KYHRRKAYEK 162
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S + K E+S+ + +F GQL S+ C
Sbjct: 163 RSIPRCC--------RKMIANESSIITRLFEGQLSYSIVC-------------------- 194
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
++C NC + V+ I +SLP+P +L +CL FF +TL
Sbjct: 195 ---------------LKCENCTYKNEVFTI---ISLPIPSEYECSLQDCLQCFFQQDTLT 236
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I ++P ++ KRF +K+ + I +P LD+
Sbjct: 237 WNNQIHCSFCETKQEAAVRATISKVPKTIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLT 296
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
YI R+ Y+LCAV NH G GHYTA+ + T WY +DDT VS +
Sbjct: 297 PYICPIFRK---HPKYNLCAVVNHFGDLD-GGHYTAFSKNSVTQAWYSFDDTRVSEIPDT 352
Query: 357 TVESAEAEHGAYILVY 372
V++A AY+L Y
Sbjct: 353 AVQTA----AAYLLFY 364
>gi|301770087|ref|XP_002920465.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Ailuropoda melanoleuca]
Length = 373
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 157/376 (41%), Gaps = 65/376 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL + L+ I K ++ A M MW
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLGSISPLAEYFLSGKY-ITALQKDCSEVATAFAYVMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL S F QQDAQEFL+Y+L L+E K + +Y
Sbjct: 101 LGDSECVSPEIFRSALGSLYPAFMKKTQQDAQEFLIYVLNELHEALK---KYHRRRSYGK 157
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S + K E S+ + +F GQ
Sbjct: 158 ESVPRC--------CRKVIANETSIITQLFEGQ--------------------------- 182
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT-LYECLNKFFNGETL- 241
L S+ C C+ + E+F LSLP+P L +CL FF +TL
Sbjct: 183 -----------LNYSIMCLKCESCTYKNEVFTVLSLPIPSEYECYLQDCLQCFFQQDTLT 231
Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDME 296
C +C+ + + I + P ++I KRF +K+ + I +P LD+
Sbjct: 232 WNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDILGTMKRKLRTDIHYPLTNLDLT 291
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+I R+ Y+LCAV NH G GHYTA+C+ T WY +DDT V +
Sbjct: 292 PFICPVFRK---HPKYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVREIPDT 347
Query: 357 TVESAEAEHGAYILVY 372
+V++A AY+L Y
Sbjct: 348 SVQTA----TAYLLFY 359
>gi|296813633|ref|XP_002847154.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
gi|238842410|gb|EEQ32072.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
Length = 1050
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 173/429 (40%), Gaps = 102/429 (23%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+NS++Q LS T + D H + SQG L N ++
Sbjct: 659 GLINLGSTCYMNSIIQSLSATVQLTKFFV--DNRFHSQVQKNWKGSQGVLPGLFANLIRS 716
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPDQYN 117
+W + V+ + + ++ G+QQQDA+EF L+ L+E+ + P
Sbjct: 717 LWKNDVEVIRPTSFRKFVGRLNTEWAGSQQQDAKEFFDVLVDCLHEDLNLNWQRTP--LR 774
Query: 118 GSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
T++ ++ + W ++ E S S +F GQ S +RC+ C++TST YE
Sbjct: 775 PLTFAEEMRREQMPIHKVSEIEWGRYTHRELSYISSLFAGQHASRLRCTTCRKTSTTYEA 834
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F+ +S+ +PP G G +Y+CLN +
Sbjct: 835 FYSISVEIPPTG-------------------------------------TGDIYQCLNSY 857
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKF 288
E L C YCK++ + K + R P L+ FKRFS++ Q K+ +P+ F
Sbjct: 858 CQEEVLSGDEVWKCPYCKREREAAKQIILTRAPRFLVFHFKRFSASRRQQARKIHTPVSF 917
Query: 289 PREGLDMEYYI--------------------SASGRR--------------------VES 308
P GLDM ++ S G R S
Sbjct: 918 PLNGLDMTPFMIQQPQPSQSSRPVSPLPNINSTDGNRDDLQLHTSKSQSMLKPHELATSS 977
Query: 309 RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEH 365
Y Y+ AV H+G T GHY + R + W +DD V+ P +++
Sbjct: 978 PYIYNAYAVVRHLGSTMNEGHYISLVRDDLRKCWRKFDDQRVTDFQPSSSRSSPDNLQNE 1037
Query: 366 GAYILVYQR 374
AY++ Y+R
Sbjct: 1038 QAYLVFYER 1046
>gi|145491367|ref|XP_001431683.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398788|emb|CAK64285.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 165/391 (42%), Gaps = 68/391 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNF 58
GL G+ N GN CY+N+ +Q LSN + + ED + ++ +QG A N
Sbjct: 83 GLVGLKNLGNKCYMNASIQLLSNLQPLSDYFI-EDFQLTEINRKNPISTQGLATVAFANL 141
Query: 59 MKMMWSSGNLVLNTKAILLALRSY--------TKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+K +W L K + + K F N QQDAQEFL+YLL ++E+
Sbjct: 142 IKSLWQMDIQKLTVKGTPIIIPEEFNKIIGYCNKSFSDNTQQDAQEFLMYLLDMIHEDLN 201
Query: 111 VVP---DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
V YS +++ +A W + S+ D+ GQ ++S++C +C
Sbjct: 202 RVTFPIKSVQLREYSGDCNQRELEKQAAETWGDYLQRSKSIIVDLMQGQFKNSLKCLSCD 261
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
+ +E LS+P+P ECQ
Sbjct: 262 NYTYKFEPLMYLSVPIPESE----ECQ--------------------------------- 284
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQK 281
L EC+ ++ E L N C+ C K D +K ++ +LP +LI+ KRF N +K
Sbjct: 285 LIECIKEYVKEEQLTNGNQWFCENCHKLVDAIKKIDLWKLPTILIIHLKRFKFIENGIKK 344
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ I FP E L++ + + + Y+L V H G T+ GHY Y R +
Sbjct: 345 IEQAINFPMESLNLSQCLPKLQKE---KPIYELLGVICHTG-TSDRGHYYTYARSKENFN 400
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
WYL++D V V+ + + AY+L+Y
Sbjct: 401 WYLFNDRQVKQVNFTEI----PQEDAYLLMY 427
>gi|340505013|gb|EGR31392.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 399
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 75/404 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
GL G+ N NTC++NS +QCLSN +++ +D+ I+ ++GQL + N +
Sbjct: 39 GLTGLLNLTNTCFLNSAIQCLSNIEKLTFYMISNQFIKDLNINNPLGTKGQLAVSYSNLI 98
Query: 60 KMMWSSGNLVLNTKAILLALRSYTK----KFDGNQQQDAQEFLLYLLAALNEEAKVVPD- 114
K +W ++ I + K +F G QQD+QE L ++L L+E+ + +
Sbjct: 99 KQIWQGTEPYVSPIQIKKIIEKKNKKIHCQFSGFNQQDSQELLNFILDGLHEDLNRIKNK 158
Query: 115 ------QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
+Y G A ++ ++ S+ D+ +GQ +S++ C +C++
Sbjct: 159 PIIENIEYQGGN---------DELYAERFFMNYKQRNDSIICDLMLGQFKSTLMCPDCRK 209
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
S ++ + +S+PVP Q+ S++ NC+ T ++
Sbjct: 210 ISITFDPYMTISVPVPQIR------QINLSLQW-NCQNTFSI------------------ 244
Query: 229 YECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT----- 279
Y+C+N+F E L C C + K EI + P +LIL KRF
Sbjct: 245 YDCINEFVQEEILQKGNEWYCNICGEHKLAKKKIEIYQTPEILILHLKRFKVGTVNKYGG 304
Query: 280 --------QKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYT 331
+K+TS + FP E L++E ++ + +++ + Y+L AVS H+G+ A GHYT
Sbjct: 305 KYFVEQEGKKITSLVDFPIENLNLEDFV-LNKKQISN--VYNLFAVSQHLGEAA-GGHYT 360
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+WY Y+D + ++ E ++ AYIL Y+R+
Sbjct: 361 TMALNFLNQKWYEYNDQ-----NVLQKKNIEVKNQAYILFYKRK 399
>gi|212529154|ref|XP_002144734.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
gi|210074132|gb|EEA28219.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
Length = 1115
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 174/409 (42%), Gaps = 80/409 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS LQCLS+T +++ + SQG + N ++ +W
Sbjct: 742 GLTNFGVTCYMNSTLQCLSSTAVMSKFFIDDRFRYYVQKNWKGSQGVMPGLYANLIRSLW 801
Query: 64 SSGNLVLNTKAILLALRSYTKKFDG----NQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+ V+ I + R++ + + ++QQDA+EF +L+ L+E+ +
Sbjct: 802 KNDVEVI----IPTSFRNFCGRLNREWAIDRQQDAKEFFDFLVDCLHEDLNI-------- 849
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ Q R L + E+ Q V + R C R +
Sbjct: 850 ------NWQRTQLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI------ 891
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP-PGGGTLYECLNKFFNG 238
+L+ Q S ++C+ CKRTST YE F+ +S+ +P G G +Y+CL +
Sbjct: 892 --------SSLFAGQHASRLKCTTCKRTSTTYEAFYSISVEIPHTGTGDIYQCLRSYCQE 943
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPRE 291
E L C YCK + K I R P +L++ KRFS++ TQ K+ +P+ FP
Sbjct: 944 EMLSGDEVWKCPYCKCERVATKQIIITRAPQILVIHLKRFSASKTQSARKIHTPVDFPLH 1003
Query: 292 GLDMEYYI-----------------------SASGRRVESRYTYDLCAVSNHIGKTALYG 328
GL M+ ++ S S +TYD V H+G T G
Sbjct: 1004 GLRMDNFVIPYPAANPEGDSVNGNGGAATPSSTSLSPTTPPFTYDAYGVLRHLGSTLSGG 1063
Query: 329 HYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
HY + R W +DD VS P D + + + E AYIL Y+R
Sbjct: 1064 HYISLVRDAQRQCWRRFDDERVSDFNPRDLRFSDRLQNEQ-AYILFYER 1111
>gi|297690455|ref|XP_002822651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pongo abelii]
Length = 566
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 146/308 (47%), Gaps = 50/308 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTC++NS+LQCLSNT R+ L +H S + L++ ++
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALMEEFAKLIQT 324
Query: 62 MWSSGNLVLNTKA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
+W+S + + + ++ Y +F G QQDAQEFL +LL L+ E V + N
Sbjct: 325 IWTSSPSDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + + G W K+ E S D+FVGQL+SS+ C++C STV++ FW+
Sbjct: 385 ENFDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 440
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSLP+ G + E+ TL +C+ F
Sbjct: 441 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 465
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
+ L TC C+ + +K + IQR P +L+L KRFS + T K+T+ + FP
Sbjct: 466 DVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 525
Query: 293 LDMEYYIS 300
LD+ + S
Sbjct: 526 LDLREFAS 533
>gi|295673712|ref|XP_002797402.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282774|gb|EEH38340.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1121
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 177/407 (43%), Gaps = 75/407 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSK-SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++QCLS T ++ + + K SQG L N ++ +W
Sbjct: 747 GLVNMGSTCYMNSIIQCLSATTQLTKFFIDNRYHTQVQKNWKGSQGILPGLFANLVRSLW 806
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G++QQDA+EF LL L+E+ + D+
Sbjct: 807 KNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNINWDR-------- 858
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN-CKRTSTVYEIFWELSLP 182
R L TTE + + + S++ + C R +
Sbjct: 859 ------TPLRPL-------TTEQELRREQMPIEQVSTIEWNRYCHREYSYI--------- 896
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYECLNKFFNG 238
+L+ Q S +RC C RTST YE F+ +S+ +P G G LY C +
Sbjct: 897 -----SSLFAGQHASRLRCKTCSRTSTTYEAFFSISVEIPSSPKSGRGDLYNCFTSYCQE 951
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNF--TQKVTSPIKFPRE 291
E L C YC+++ + K + R P +L++ FKRFS S F T+K+ +PI FP
Sbjct: 952 EMLSGDEVWKCPYCRREREATKQIILTRAPRLLVIHFKRFSLSRFQQTRKINTPISFPIT 1011
Query: 292 GLDMEYY---------------------ISASGRRVESRYTYDLCAVSNHIGKTALYGHY 330
GLD+ + +S S Y Y+ + HIG ++ GHY
Sbjct: 1012 GLDLTPFMVRPDRSPSPDSNADETTSTNMSNSAFSTTPPYIYNAYGIVRHIGSSSTEGHY 1071
Query: 331 TAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
+ R + G W +DD V+ PV + + + + AY++ Y+R
Sbjct: 1072 VSLVRDDRRGCWRKFDDQRVTDFNPVGLRPADGLQNDQ-AYLVFYER 1117
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 177/392 (45%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 173
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 174 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 231
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ D +NG ++S + L K +S V + IF G L++ V C C
Sbjct: 232 -LQDGFNGVSHSAILQEN----STLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTE 286
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 287 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 321
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 322 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 381
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 382 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 439
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 440 HFNDSTVTLTDEETVVKAK----AYILFYVER 467
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 177/392 (45%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ D +NG ++S + L K +S V + IF G L++ V C C
Sbjct: 276 -LQDGFNGVSHSAILQEN----STLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFYVER 511
>gi|355778037|gb|EHH63073.1| hypothetical protein EGM_15969, partial [Macaca fascicularis]
Length = 343
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 156/353 (44%), Gaps = 66/353 (18%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSN---------TPAFRNVLLNEDIPIHPDSKSQGQLV 52
S G+ G+ N GNTCY+N++LQCL + + + L E P S ++
Sbjct: 40 SQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKETYPFLLPSDC-SEVA 98
Query: 53 DALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV 112
A M MW + ++ + AL + F QQDAQEFL+Y+L L+E K
Sbjct: 99 TAFAYLMTDMWLGDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALK-- 156
Query: 113 PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
+Y+ Y S + GS A K+ TTE SV + +F GQL S+ C C++ +
Sbjct: 157 --KYH---YPRRRSHEKGS--AQRCCRKWITTETSVITQLFEGQLNYSIVCLKCEKCTYK 209
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
E+F LSLP+P + YEC L+ +CL
Sbjct: 210 NEVFTVLSLPIP----SEYECSLQ---------------------------------DCL 232
Query: 233 NKFFNGETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPI 286
FF +TL C +C+ + + I + P ++I KRF T +K+ + I
Sbjct: 233 QCFFQQDTLTWNNQIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQGTTKRKLRTDI 292
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
+P LD+ YI R+ Y+LCAV NH G GHYTA+C+ T
Sbjct: 293 HYPLTNLDLTPYICPIFRKYPK---YNLCAVVNHFGDLD-GGHYTAFCKNSFT 341
>gi|145537628|ref|XP_001454525.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422291|emb|CAK87128.1| unnamed protein product [Paramecium tetraurelia]
Length = 472
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 170/385 (44%), Gaps = 69/385 (17%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVN 57
S GL G+ N GNTCYIN+ +QCLSNT F+ L N ++ I S+GQ+ +A
Sbjct: 48 SCGLIGLQNLGNTCYINAAIQCLSNTQPLTEYFQQNLHNHELNIENPLSSRGQITNAYAR 107
Query: 58 FMKMMW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
+ +W S +N ++ ++ + F N QQD+ E L +LL L+E+ V ++
Sbjct: 108 LICSLWKESYQKSINPIELISMIQLWNPFFVMNSQQDSHELLAFLLDMLHEDLNRV--KH 165
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
T +Q +A W + S+ D+F GQ + ++C C S +E F
Sbjct: 166 KPYIEEKTYDQQPNQQQANKAWSDYLKRNRSIIVDLFQGQSINMLQCMVCNTKSYKFETF 225
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
LSLP+ L +C++++
Sbjct: 226 MYLSLPIQQDAD---------------------------------------LIQCISEYL 246
Query: 237 NGETLHNTCQYCKKQSDL-------VKLYEIQRLPPVLILWFKR--FSSNFTQKVTSPIK 287
E L Q+ + +KL+ +LP +L++ KR F++N+ K+ I
Sbjct: 247 REEELDEANQWHCSKCKSVKKSKKGIKLW---KLPNILVIHLKRFKFTANYRCKLRWLIN 303
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP LD+ Y + + TYDL V NH G T GHYT+ C+ + T +WY +DD
Sbjct: 304 FPMYNLDLSNYSE------QEQATYDLYGVINHSG-TLHSGHYTSNCKNKDTQKWYNFDD 356
Query: 348 TVVSPVDAQTVESAEAEHGAYILVY 372
T + + + V +++ AY+L Y
Sbjct: 357 TRIKEIMEKEVLTSD----AYLLFY 377
>gi|326471092|gb|EGD95101.1| ubiquitin C-terminal hydrolase [Trichophyton tonsurans CBS 112818]
Length = 1074
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 108/432 (25%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---DIPIHPDSK-----SQGQLVDALVNF 58
G+ N G+TCY+NS++Q LS T VLL + D H + SQG L N
Sbjct: 683 GLINLGSTCYMNSIIQSLSAT-----VLLTKFFVDNRFHAQVQKNWKGSQGVLPGLFANL 737
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPD 114
++ +W + V+ + + ++ G+QQQDA+EF L+ L+E+ + P
Sbjct: 738 IRSLWKNDVEVIRPTSFRKFVGRLNTEWAGSQQQDAKEFFDVLVDCLHEDLNLRWQRTP- 796
Query: 115 QYNGSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
T++ ++ + W ++ E S S +F GQ S +RC+ C++TST
Sbjct: 797 -LRPLTFAEEMRREQMPIHKVSEIEWARYSHRELSYVSTLFAGQHASRLRCTTCRKTSTT 855
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
YE F+ +S+ +P G G +Y+CL
Sbjct: 856 YEAFYSISVEIPVTGA-------------------------------------GDIYQCL 878
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSP 285
+ E L C YCK++ + K + R P L+ FKRFS++ Q K+ +P
Sbjct: 879 KSYCQEEVLSGDEVWKCPYCKREREAAKQIILTRAPRFLVFHFKRFSASRRQQARKIHTP 938
Query: 286 IKFPREGLDMEYYI------SASGRRV--------------------------------- 306
+ FP GLDM ++ S S R V
Sbjct: 939 VSFPLSGLDMTPFMIQHPQHSQSSRPVSPLPDGNDDKLDSKSNSHAPPKSQSVLQTNELA 998
Query: 307 -ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAE 362
S Y Y+ AV HIG T GHY + R E W +DD V+ P +++
Sbjct: 999 TSSPYIYNAYAVVRHIGSTMNEGHYISLVRDEQRRCWRKFDDQRVTDFQPSSSRSSPDNL 1058
Query: 363 AEHGAYILVYQR 374
AY++ Y+R
Sbjct: 1059 QNEQAYLVFYER 1070
>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
Length = 347
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 167/395 (42%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFM 59
GL G++N GNTC++NS LQCL++ L +D+ +G+L +A +
Sbjct: 1 GLAGLSNLGNTCFMNSSLQCLAHAVPLMQAFLGGTYIKDLNRTNPLGMKGELAEAFGMLL 60
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+ +W G ++ ++ + + +F G Q D+QEFL +LL L+E+ + +
Sbjct: 61 QQLWRGGVSSVSPRSFKAKIGRFAPQFSGYAQHDSQEFLAFLLDGLHEDTNRIKTKPYFE 120
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
T A W +++ S+ D F G L+S +
Sbjct: 121 TKDEPGRPD--EELATEAWSQYRARNNSLVVDHFQGLLKSGLD----------------- 161
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLYECLNKFF 236
C C S ++ F LSLP+P L +C+ F
Sbjct: 162 ---------------------CPKCAYHSVKFDPFMYLSLPLPESRRRPVALEDCMRVFL 200
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQ-KVTSPIKFPR 290
E L + C CK+ K ++ LP VL++ KRFS + +++ K+ + + FP
Sbjct: 201 QPERLDESDAWYCPRCKEHVCADKKLDLWSLPEVLVVHLKRFSYTRYSRNKLDTRVDFPL 260
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCR-----------REGT 339
GLD+ Y+ R YD AVSNH G GHYTAY + +G
Sbjct: 261 HGLDLGSYVL---RAQGVAPLYDCFAVSNHFGSMG-GGHYTAYAKLPGPPPGTAAGADGA 316
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
WY +DD+ VS V+ + V S+ AY+L Y+R
Sbjct: 317 EAWYCFDDSHVSAVEPEAVRSS----AAYVLFYRR 347
>gi|226292059|gb|EEH47479.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides brasiliensis
Pb18]
Length = 1106
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 75/407 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSK-SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++QCLS T ++ + + K SQG L N ++ +W
Sbjct: 732 GLVNMGSTCYMNSIIQCLSATTQLTKFFIDNRYHTQVQKNWKGSQGILPGLFANLVRSLW 791
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G++QQDA+EF LL L+E+ + D+
Sbjct: 792 KNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNINWDRT------- 844
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN-CKRTSTVYEIFWELSLP 182
R L TTE + + + S++ + C R +
Sbjct: 845 -------PLRPL-------TTEQELRREQMPIEQVSTIEWNRYCHREYSFI--------- 881
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYECLNKFFNG 238
+L+ Q S +RC C RTST YE F+ +S+ +P G G LY C +
Sbjct: 882 -----SSLFAGQHASRLRCKTCSRTSTTYEAFFSISVEIPSSPKSGRGDLYNCFTSYCQE 936
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNF--TQKVTSPIKFPRE 291
E L C +C+++ + K + R P +L++ FKRFS S F T+K+ +PI FP
Sbjct: 937 EMLSGDEVWKCPHCRREREATKQIILTRAPRLLVIHFKRFSLSRFQQTRKINTPISFPIT 996
Query: 292 GLDMEYYISASGR---------------------RVESRYTYDLCAVSNHIGKTALYGHY 330
GLD+ ++ R Y Y+ + HIG ++ GHY
Sbjct: 997 GLDLTPFMVRPDRSPSPDSNADETTSTNMTNSAFSTTPPYIYNAYGIVRHIGSSSTEGHY 1056
Query: 331 TAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
+ R + G W +DD V+ PV + + + + AY++ Y+R
Sbjct: 1057 VSLVRDDRRGCWRKFDDQRVTDFNPVGLKPADGLQNDQ-AYLVFYER 1102
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 178/392 (45%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 162 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDVNVS 219
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 220 LVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 277
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +++GS++S S Q R++ K AS V + +F G L++ V C C
Sbjct: 278 -LQGEFDGSSHSVLS--QANCSRSVS--NKCCINGASTVVTSVFGGVLQNEVNCLICGTE 332
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ RC N + T TL
Sbjct: 333 SRKFDPFLDLSLDIPS--------QFRNK-RCKNQENGPTC----------------TLR 367
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L TC CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 368 DCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 427
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ + FP GLDM+ ++ YDL AV H G GHYTAY E GRW+
Sbjct: 428 TYVDFPLRGLDMKSFLLEPENIGPESCLYDLEAVVVHHGSGVGSGHYTAYATHE--GRWF 485
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ + +TV A+ AYIL Y R
Sbjct: 486 HFNDSTVTLTEEETVAKAK----AYILFYVER 513
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHRCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEDTVVKAK----AYILFYVER 511
>gi|326479777|gb|EGE03787.1| ubiquitin carboxyl-terminal hydrolase [Trichophyton equinum CBS
127.97]
Length = 1074
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 108/432 (25%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---DIPIHPDSK-----SQGQLVDALVNF 58
G+ N G+TCY+NS++Q LS T VLL + D H + SQG L N
Sbjct: 683 GLINLGSTCYMNSIIQSLSAT-----VLLTKFFVDNRFHAQVQKNWKGSQGVLPGLFANL 737
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPD 114
++ +W + V+ + + ++ G+QQQDA+EF L+ L+E+ + P
Sbjct: 738 IRSLWKNDVEVIRPTSFRKFVGRLNTEWAGSQQQDAKEFFDVLVDCLHEDLNLRWQRTP- 796
Query: 115 QYNGSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
T++ ++ + W ++ E S S +F GQ S +RC+ C++TST
Sbjct: 797 -LRPLTFAEEMRREQMPIHKVSEIEWARYSHRELSYVSTLFAGQHASRLRCTTCRKTSTT 855
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
YE F+ +S+ +P G G +Y+CL
Sbjct: 856 YEAFYSISVEIPVTGA-------------------------------------GDIYQCL 878
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSP 285
+ E L C YCK++ + K + R P L+ FKRFS++ Q K+ +P
Sbjct: 879 KSYCQEEVLSGDEVWKCPYCKREREAAKQIILTRAPRFLVFHFKRFSASRRQQARKIHTP 938
Query: 286 IKFPREGLDMEYYI------SASGRRV--------------------------------- 306
+ FP GLDM ++ S S R V
Sbjct: 939 VSFPLSGLDMTPFMIQHPQHSQSSRPVSPLPDGNDDKLDSKSNSHAPPKSQSVLQTNELA 998
Query: 307 -ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAE 362
S Y Y+ AV HIG T GHY + R E W +DD V+ P +++
Sbjct: 999 TSSPYIYNAYAVVRHIGSTMNEGHYISLVRDEQRRCWRKFDDQRVTDFQPSSSRSSPDNL 1058
Query: 363 AEHGAYILVYQR 374
AY++ Y+R
Sbjct: 1059 QNEQAYLVFYER 1070
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 176/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 195
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 196 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 253
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + AL K AS V + IF G L++ V C C
Sbjct: 254 -LQGGFNGVSRSTILQEN----SALSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 308
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 309 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 343
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 344 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 403
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 404 TYVEFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 461
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 462 HFNDSTVTLTDEETVVKAK----AYILFYVER 489
>gi|327302584|ref|XP_003235984.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
gi|326461326|gb|EGD86779.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
Length = 1074
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 108/432 (25%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---DIPIHPDSK-----SQGQLVDALVNF 58
G+ N G+TCY+NS++Q LS T VLL + D H + SQG L N
Sbjct: 683 GLINLGSTCYMNSIIQSLSAT-----VLLTKFFVDNRFHAQVQKNWKGSQGVLPGLFANL 737
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPD 114
++ +W + V+ + + ++ G+QQQDA+EF L+ L+E+ + P
Sbjct: 738 IRSLWKNDVEVIRPTSFRKFVGRLNTEWAGSQQQDAKEFFDVLVDCLHEDLNLRWQRTP- 796
Query: 115 QYNGSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
T++ ++ + W ++ E S S +F GQ S +RC+ C++TST
Sbjct: 797 -LRPLTFAEEMRREQMPIHKVSEIEWARYSHRELSYVSSLFAGQHASQLRCTTCRKTSTT 855
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
YE F+ +S+ +P G G +Y+CL
Sbjct: 856 YEAFYSISVEIPVTG-------------------------------------TGDIYQCL 878
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSP 285
+ E L C YCK++ + K + R P L+ FKRFS++ Q K+ +P
Sbjct: 879 KSYCQEEVLSGDEVWKCPYCKREREAAKQIILTRAPRFLVFHFKRFSASRRQQARKIHTP 938
Query: 286 IKFPREGLDMEYYI------SASGRRV--------------------------------- 306
+ FP GLDM ++ S S R V
Sbjct: 939 VSFPLSGLDMTPFMIQHPQHSQSSRPVSPLPDGSDDKLDSKSNSHAPPKSQSVLQTNELA 998
Query: 307 -ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAE 362
S Y Y+ AV HIG T GHY + R E W +DD V+ P +++
Sbjct: 999 TSSPYIYNAYAVVRHIGSTMNEGHYISLVRDEQRRCWRKFDDQRVTDFQPSSSRSSPDNL 1058
Query: 363 AEHGAYILVYQR 374
AY++ Y+R
Sbjct: 1059 QNEQAYLVFYER 1070
>gi|83767337|dbj|BAE57476.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 872
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 175/404 (43%), Gaps = 76/404 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+AN G TCY+NS +QCL+ T ++ + SQG + N ++ +W
Sbjct: 505 GLANFGVTCYMNSTIQCLNATMMLSRFFVDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 564
Query: 64 SSGNLVLNTKAILLALRSYTKKFDG----NQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
V+ + + R++ + + ++QQDA+EF + + L+E+ +
Sbjct: 565 KGDVEVI----VPTSFRNFCGRLNQEWAIDRQQDAKEFFDFTVDCLHEDLNI-------- 612
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ Q R L + E+ Q V + R C R +
Sbjct: 613 ------NWQRSPLRPLTFEEEMQRERMPVAKVSKIEWDRY------CHREESFI------ 654
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNG 238
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL +
Sbjct: 655 --------SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSSGTGDIYQCLRSYCKE 706
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPRE 291
E L C YCK + K I R P +L++ FKRFS++ TQ K+ +PI+FP
Sbjct: 707 EMLSGDEVWKCPYCKCERVATKQIIITRAPQILVIHFKRFSASKTQTARKIHTPIEFPLH 766
Query: 292 GLDMEYYISASGRRVESR------------------YTYDLCAVSNHIGKTALYGHYTAY 333
GL M+ ++ S ES +TYD V HIG + GHY +
Sbjct: 767 GLRMDDFV-YSPPSPESNGDPKATMPHDTTLATVPPFTYDAYGVLRHIGSSMSSGHYISL 825
Query: 334 CRREGTGRWYLYDD--TV-VSPVDAQTVESAEAEHGAYILVYQR 374
R W +DD TV +P D + + + E AYI+ Y+R
Sbjct: 826 VRDGARQCWRRFDDERTVDFNPRDLRNKDRLQNEQ-AYIVFYER 868
>gi|225681226|gb|EEH19510.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides brasiliensis
Pb03]
Length = 1106
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 176/407 (43%), Gaps = 75/407 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSK-SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++QCLS T ++ + + K SQG L N ++ +W
Sbjct: 732 GLVNMGSTCYMNSIIQCLSATTQLTKFFIDNRYHTQVQKNWKGSQGILPGLFANLVRSLW 791
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G++QQDA+EF LL L+E+ + D+
Sbjct: 792 KNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNINWDRT------- 844
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN-CKRTSTVYEIFWELSLP 182
R L TTE + + + S++ + C R +
Sbjct: 845 -------PLRPL-------TTEQELRREQMPIEQVSTIEWNRYCHREYSYI--------- 881
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYECLNKFFNG 238
+L+ Q S +RC C RTST YE F+ +S+ +P G G LY C +
Sbjct: 882 -----SSLFAGQHASRLRCKTCSRTSTTYEAFFSISVEIPSSPKSGRGDLYNCFTSYCQE 936
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNF--TQKVTSPIKFPRE 291
E L C +C+++ + K + R P +L++ FKRFS S F T+K+ +PI FP
Sbjct: 937 EMLSGDEVWKCPHCRREREATKQIILTRAPRLLVIHFKRFSLSRFQQTRKINTPISFPIT 996
Query: 292 GLDMEYYISASGR---------------------RVESRYTYDLCAVSNHIGKTALYGHY 330
GLD+ ++ R Y Y+ + HIG ++ GHY
Sbjct: 997 GLDLTPFMVRPDRSPSPDSNADETTSTNMTNSAFSTTPPYIYNAYGIVRHIGSSSTEGHY 1056
Query: 331 TAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
+ R + G W +DD V+ PV + + + + AY++ Y+R
Sbjct: 1057 VSLVRDDRRGCWRKFDDQRVTDFNPVGLKPADGLQNDQ-AYLVFYER 1102
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 176/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + F + K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQENSTLFAS----NKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTVTDEETVVKAK----AYILFYVER 511
>gi|397567796|gb|EJK45783.1| hypothetical protein THAOC_35581 [Thalassiosira oceanica]
Length = 578
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 164/393 (41%), Gaps = 67/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK----SQGQLVDALVNFM 59
G G+ N GN+CY+NS+LQC++ L D + S G++ A +F+
Sbjct: 198 GTVGLHNLGNSCYMNSILQCINQIKPITGYFLEGDYQKELNKANPLGSGGRVATAYGSFL 257
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+W V+ + + + + ++F+ N Q D+QEF YL+ L+E+ V ++
Sbjct: 258 NDIWGGEYSVVAPRILKQTVSMFAQQFNNNYQHDSQEFCQYLMDGLHEDLNRVREKPYVE 317
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ + A+ W K S+F D G RS +
Sbjct: 318 AVEAFGMEDGKA--AVESWRKHLLRHDSIFVDYTQGMHRSHLT----------------- 358
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG--GGT---LYECLNK 234
C C + S ++++ +SLP+ P G + L CL++
Sbjct: 359 ---------------------CPACGKESIKFDVYSSISLPIVPAKEGSSSVPLKACLDQ 397
Query: 235 FFNGETL--HNT--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---------FTQK 281
F GE L HN C CK+ +K ++ P V++L KRF+ +K
Sbjct: 398 FAVGEQLDEHNAWYCPSCKRHVCALKHIQLWNTPDVIVLHMKRFTFEKCPDEDGKIIRRK 457
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + FP + LD+ Y+ + ++ Y L VS H G TA GHYTA R G G
Sbjct: 458 IEETVDFPIDRLDLSPYVYGP-KYEDAPPVYRLFGVSEHTGATANSGHYTATVRNSGDGN 516
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
WY Y+D+ V + A GAY+L YQR
Sbjct: 517 WYRYNDSHV----GSSSGDAAVTGGAYLLFYQR 545
>gi|195170310|ref|XP_002025956.1| GL10121 [Drosophila persimilis]
gi|194110820|gb|EDW32863.1| GL10121 [Drosophila persimilis]
Length = 976
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 190/468 (40%), Gaps = 105/468 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQ------LVDAL 55
GL G+ N NTCY+NS LQ LSN P + +N + + D ++ + L +
Sbjct: 80 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIADQRANARICKPAGLAKSY 139
Query: 56 VNFMKMMWS---SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE--AK 110
+ M+ +WS + + IL +RS F G QQ D QEFL + L+EE +
Sbjct: 140 IRLMQEIWSEIEDPKEYIAPRGILYGIRSVHPIFRGYQQHDTQEFLRCFMDQLHEELTEQ 199
Query: 111 VVP----------DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS---------VFSD 151
V P Q N + N S A +++T E+S + ++
Sbjct: 200 VSPQSRQSQQRQNKQPNETDDENEDEVPPSSHSATGSESEYETCESSMSEIAGEVMINTE 259
Query: 152 IFVGQLRSSVRCSNC----------KRTSTVYEIFWELSLPVPPGGGTL---YECQLRSS 198
FV R+ + +R E + P+ + ++ +L S+
Sbjct: 260 FFVTPSRTVIGSGTAIPEAPPKPQQQRKQKKRETSSDQKPPIESARSIISDVFDGKLLSA 319
Query: 199 VRCSNCKRTSTVYEIFWELSLPVPP----------------------------------- 223
V+C C R S+ E F +LSLP+P
Sbjct: 320 VQCLTCDRVSSRQETFQDLSLPIPTRDFLNVLHQTHSLSVQSLSAAETSSRTNDGWLAWM 379
Query: 224 ----------GGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLIL 269
TLY+C+ FF+ + L +C C K +K + LP VL +
Sbjct: 380 WGVFRSWLYGPSVTLYDCMASFFSADELKGDNMYSCSRCNKLRTGIKYSRVINLPEVLCI 439
Query: 270 WFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRY-TYDLCAVSNHIGKTAL 326
KRF + ++ K++S + FP EG DM Y+ ++ +S Y+L +V H G T
Sbjct: 440 HLKRFRHDLSYSSKISSHVIFPMEGFDMRPYVH---KQCKSEVPIYNLSSVICHHG-TVG 495
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT Y R GRWY +DD V+ V V++ + AY+L YQ+
Sbjct: 496 GGHYTCYARNTLNGRWYEFDDQFVTVVSPDVVQNCQ----AYVLFYQK 539
>gi|313228219|emb|CBY23368.1| unnamed protein product [Oikopleura dioica]
Length = 595
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 164/381 (43%), Gaps = 82/381 (21%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-----PDSKSQGQLVDAL 55
++ L GI N+GN CYI++ LQCL R LL+ + H P +L +
Sbjct: 285 IAKDLTGIKNSGNNCYISTALQCLYRMEDLREFLLSGEYKKHLNKTSPADGEIAELTSEI 344
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
MK + S+ ++ + + A+ ++ F+ ++Q+DA+EFLL L+ L+ + +
Sbjct: 345 FGKMKNLESN----ISIEDLKDAVSEFSGMFENDEQEDAEEFLLTLIDGLHLDLEKSSGF 400
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ N+S W ++ + E S + +FVGQ S++
Sbjct: 401 VESANVPNSSE---------EAWNQYISEENSFLTSLFVGQAESTLT------------- 438
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
C C+ ++ +E FW +SLP+ G ++ EC+ KF
Sbjct: 439 -------------------------CLACQESTKNWESFWNISLPIS-GSSSIEECIEKF 472
Query: 236 FNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPRE 291
ETL C+ C+K+ D+ K I ++P L+L KRFSS K +S IKFP
Sbjct: 473 QKSETLTGEDQPFCESCQKKCDMTKSLRISKIPRTLLLHLKRFSSK--SKDSSLIKFP-- 528
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
+ L +V NH GK+ GHY A R G W+ D +S
Sbjct: 529 ---------VDSSLSLESSEFKLSSVINHQGKSTSSGHYLASVRH--NGNWFSISDEKIS 577
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ + VESA+ AY+L Y
Sbjct: 578 SL--EKVESAD----AYVLFY 592
>gi|302663843|ref|XP_003023559.1| hypothetical protein TRV_02306 [Trichophyton verrucosum HKI 0517]
gi|291187562|gb|EFE42941.1| hypothetical protein TRV_02306 [Trichophyton verrucosum HKI 0517]
Length = 1074
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 108/432 (25%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---DIPIHPDSK-----SQGQLVDALVNF 58
G+ N G+TCY+NS++Q LS T VLL + D H + SQG L N
Sbjct: 683 GLINLGSTCYMNSIIQSLSAT-----VLLTKFFVDNRFHAQVQKNWKGSQGVLPGLFANL 737
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPD 114
++ +W + V+ + + ++ G+QQQDA+EF L+ L+E+ + P
Sbjct: 738 IRSLWKNDVEVIRPTSFRKFVGRLNTEWAGSQQQDAKEFFDVLVDCLHEDLNLRWQRTP- 796
Query: 115 QYNGSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
T++ ++ + W ++ E S S +F GQ S +RC+ C++TST
Sbjct: 797 -LRPLTFAEEMRREQMPIHKVSEIEWARYSHRELSYVSSLFAGQHASRLRCTTCRKTSTT 855
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
YE F+ +S+ +P G G +Y+CL
Sbjct: 856 YEAFYSISVEIPVTG-------------------------------------TGDIYQCL 878
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSP 285
+ E L C YCK++ + K + R P L+ FKRFS++ Q K+ +P
Sbjct: 879 KSYCQEEVLSGDEVWKCPYCKREREAAKQIILTRAPRFLVFHFKRFSASRRQQARKIHTP 938
Query: 286 IKFPREGLDMEYYI------SASGRRV--------------------------------- 306
+ FP GLDM ++ S S R V
Sbjct: 939 VSFPLSGLDMTPFMIQHPQHSQSSRPVSPLPDGNDDKLDSKSNSHAPPKSQSALQTNELA 998
Query: 307 -ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAE 362
S Y Y+ AV HIG T GHY + R E W +DD V+ P +++
Sbjct: 999 TSSPYIYNAYAVVRHIGSTMNEGHYISLVRDEQRRCWRKFDDQRVTDFQPSSSRSSPDNL 1058
Query: 363 AEHGAYILVYQR 374
AY++ Y+R
Sbjct: 1059 QNEQAYLVFYER 1070
>gi|348507883|ref|XP_003441485.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Oreochromis
niloticus]
Length = 649
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 173/439 (39%), Gaps = 113/439 (25%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--------------------- 39
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D+
Sbjct: 258 LAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEELLAKTNHSQGMKGVTG 317
Query: 40 -----------------PIHPDSKSQGQLVDALVNFMKMMWSSGNLVLNTKAILLALRSY 82
P ++ Q L L ++MWS +++ A+L ++ +
Sbjct: 318 GAGCWNLPVGKKESVSPPPRCSTRQQMSLCHELHTLFRVMWSGRWSLVSPFAMLHSVWNL 377
Query: 83 TKKFDGNQQQDAQEFLLYLLAALNEEAK--------VVPDQYNGSTYSNTSSKQVGSFRA 134
F G QQDAQEFL LL + +E V+P SKQV
Sbjct: 378 IPAFRGYDQQDAQEFLCELLDKVQQELDTEGSKRRIVIP------ITKRKLSKQV----- 426
Query: 135 LHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQ 194
V + IF GQL S V C +CK S E FW+LSL P ++ +
Sbjct: 427 -----------LKVLNTIFHGQLLSQVTCLSCKHKSNTVEPFWDLSLEFPERYHSIDK-- 473
Query: 195 LRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT---CQYCKKQ 251
+ST Y+ TL E L+KF E L + C +C K+
Sbjct: 474 ----------GSSSTAYQ-----------RSCTLTEMLSKFTEMEALEGSIYACNHCNKR 512
Query: 252 -----------SDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLDMEY 297
S+ K I RLP VL L KRF N +K+ + F + Y
Sbjct: 513 RRKSSHKPLVLSEACKQLLIYRLPQVLRLHLKRFRWSGRNHREKIGVHVAFDQVLNIKPY 572
Query: 298 YISASGRRVE-SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+ SG V YTYDL AV H GK GHYTAYC G W +D+ + +
Sbjct: 573 CCTGSGHSVHRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVE 632
Query: 357 TVESAEAEHGAYILVYQRR 375
V + + AYIL Y +R
Sbjct: 633 EVCNTQ----AYILFYTQR 647
>gi|193787209|dbj|BAG52415.1| unnamed protein product [Homo sapiens]
Length = 285
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 135/297 (45%), Gaps = 53/297 (17%)
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 1 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 57
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
Y ++ + F+A H W+K + S+ +F GQ +
Sbjct: 58 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 98
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
S+V+C C + S +E F LSLP+ TL +CL F
Sbjct: 99 -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 139
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPR 290
E L + C +C+ + D +K EI +LPPVL++ KRFS + + QK+ + + FP
Sbjct: 140 KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 199
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
E LD+ Y+ ++ Y+L +VSNH G GHYTAYC+ RW+ +DD
Sbjct: 200 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-RGHYTAYCKNAARQRWFKFDD 252
>gi|395746718|ref|XP_002825502.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Pongo abelii]
Length = 360
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 154/358 (43%), Gaps = 61/358 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N NTCY+N++LQCL + L+ I ++ A M MW
Sbjct: 42 GVTGLQNLCNTCYVNAILQCLCSILPLVEYFLSGKY-ITALQNDCSEVATAFAYLMTDMW 100
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + AL + F QQDAQEFL+Y+L L+E K +Y+ Y
Sbjct: 101 LGDSDCVSPEIFQSALGNLYPAFMKKTQQDAQEFLIYVLNELHEALK----KYH---YPR 153
Query: 124 TSSKQVGSF-RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
S + GS R W TE SV + +F GQ
Sbjct: 154 RRSYEKGSTQRCCRMW---INTETSVITQLFEGQ-------------------------- 184
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL 241
L S+ C NC++ + E+F LSLP+P +L +CL FF + L
Sbjct: 185 ------------LNYSIVCLNCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQSFFQQDAL 232
Query: 242 ----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDM 295
C +C+ + + I + P ++I KR+ T +K+ + I +P LD+
Sbjct: 233 TWNNEIHCSFCETKQETAVKANISKAPKIIIFHLKRYDIQGTTKRKLRTDIHYPLTNLDL 292
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
YI + R+ Y LCAV NH G GHYTA+C+ T WY +DDT VS +
Sbjct: 293 APYICSICRKYPK---YSLCAVVNHFGDLDG-GHYTAFCKNSVTQAWYSFDDTRVSEI 346
>gi|355692712|gb|EHH27315.1| hypothetical protein EGK_17486, partial [Macaca mulatta]
Length = 343
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 154/353 (43%), Gaps = 66/353 (18%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN---------EDIPIHPDSKSQGQLV 52
S G+ G+ N GNTCY+N++LQCL + L+ E P S ++
Sbjct: 40 SQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKNLCSFQKETYPFLLPSDC-SEVA 98
Query: 53 DALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV 112
A M MW + ++ + AL + F QQDAQEFL+Y+L L+E K
Sbjct: 99 TAFAYLMTDMWLGDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALK-- 156
Query: 113 PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
+Y+ Y S + GS A K+ TTE SV + +F GQL S+ C C++ +
Sbjct: 157 --KYH---YPRRRSHEKGS--AQRCCRKWITTETSVITQLFEGQLNYSIVCLKCEKCTYK 209
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
E+F LSLP+P + YEC L+ +CL
Sbjct: 210 NEVFTVLSLPIP----SEYECSLQ---------------------------------DCL 232
Query: 233 NKFFNGETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPI 286
FF +TL C +C+ + + I + P ++I KRF +K+ + I
Sbjct: 233 QCFFQQDTLTWNNQIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQGKTKRKLRTDI 292
Query: 287 KFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
+P LD+ YI R+ Y+LCAV NH G GHYTA+C+ T
Sbjct: 293 HYPLTNLDLTPYICPIFRKYPK---YNLCAVVNHFGDLD-GGHYTAFCKNSFT 341
>gi|255932867|ref|XP_002557904.1| Pc12g10840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582523|emb|CAP80711.1| Pc12g10840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1091
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 173/396 (43%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS +QCLS T ++ + SQG + N + +W
Sbjct: 728 GLTNFGVTCYMNSTIQCLSATIPLSRFFIDNRFRYYVQKNWKGSQGVMPGLYANLTRSLW 787
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 788 KNDIEVIMPTSFRNFCGRLNREWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 835
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q + + R C R +
Sbjct: 836 --NWQRTPLRPLTFSEEMQRERMPMTKVSRIEWDRY------CHREESFI---------- 877
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-GGGTLYECLNKFFNGETLH 242
+L+ Q S +RC+ C +TST YE F+ +S+ +PP G G +Y+CL + E L
Sbjct: 878 ----SSLFAGQHASRLRCTTCHQTSTTYEAFYSISVEIPPTGAGDIYQCLRSYCKEEMLS 933
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C +CK + K I R P +L++ FKRFS++ TQ K+ +PI+FP GL M
Sbjct: 934 GDEVWKCPHCKCKRMATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIEFPLHGLRM 993
Query: 296 EYYI--------------SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ ++ +G V +TYD AV H+G + GHY + R
Sbjct: 994 DDFVISHPPPPPPEPGMPPTTGATVPP-FTYDAFAVLRHLGSSMGSGHYISLVRDAERQC 1052
Query: 342 WYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
W +DD V+ P + +T + + E AYI+ Y+R
Sbjct: 1053 WRKFDDDRVTDFNPRELRTRDRLQNEQ-AYIVFYER 1087
>gi|302510026|ref|XP_003016973.1| hypothetical protein ARB_05267 [Arthroderma benhamiae CBS 112371]
gi|291180543|gb|EFE36328.1| hypothetical protein ARB_05267 [Arthroderma benhamiae CBS 112371]
Length = 1074
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 175/432 (40%), Gaps = 108/432 (25%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---DIPIHPDSK-----SQGQLVDALVNF 58
G+ N G+TCY+NS++Q LS T VLL + D H + SQG L N
Sbjct: 683 GLINLGSTCYMNSIIQSLSAT-----VLLTKFFVDNRFHAQVQKNWKGSQGVLPGLFANL 737
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPD 114
++ +W + V+ + + ++ G+QQQDA+EF L+ L+E+ + P
Sbjct: 738 IRSLWKNDVEVIRPTSFRKFVGRLNTEWAGSQQQDAKEFFDVLVDCLHEDLNLRWQRTP- 796
Query: 115 QYNGSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
T++ ++ + W ++ E S S +F GQ S +RC+ C++TST
Sbjct: 797 -LRPLTFAEEMRREQMPIHKVSEIEWARYSHRELSYVSSLFAGQHASRLRCTTCRKTSTT 855
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
YE F+ +S+ +P G G +Y+CL
Sbjct: 856 YEAFYSISVEIPVTG-------------------------------------TGDIYQCL 878
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSP 285
+ E L C YCK++ + K + R P L+ FKRFS++ Q K+ +P
Sbjct: 879 KSYCQEEVLSGDEVWKCPYCKREREAAKQIILTRAPRFLVFHFKRFSASRRQQARKIHTP 938
Query: 286 IKFPREGLDMEYYI------SASGRRV--------------------------------- 306
+ FP GLDM ++ S S R V
Sbjct: 939 VSFPLSGLDMTPFMIQHPQHSQSSRPVSPLPDGNDDKLDSKSNSHAPLKSQSALQTNELA 998
Query: 307 -ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAE 362
S Y Y+ AV HIG T GHY + R E W +DD V+ P +++
Sbjct: 999 TSSPYIYNAYAVVRHIGSTMNEGHYISLVRDEQRRCWRKFDDQRVTDFQPSSSRSSPDNL 1058
Query: 363 AEHGAYILVYQR 374
AY++ Y+R
Sbjct: 1059 QNEQAYLVFYER 1070
>gi|238487642|ref|XP_002375059.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
gi|220699938|gb|EED56277.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
Length = 827
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 175/404 (43%), Gaps = 76/404 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+AN G TCY+NS +QCL+ T ++ + SQG + N ++ +W
Sbjct: 460 GLANFGVTCYMNSTIQCLNATMMLSRFFVDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 519
Query: 64 SSGNLVLNTKAILLALRSYTKKFDG----NQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
V+ + + R++ + + ++QQDA+EF + + L+E+ +
Sbjct: 520 KGDVEVI----VPTSFRNFCGRLNQEWAIDRQQDAKEFFDFTVDCLHEDLNI-------- 567
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ Q R L + E+ Q V + R C R +
Sbjct: 568 ------NWQRSPLRPLTFEEEMQRERMPVAKVSKIEWDRY------CHREESFI------ 609
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNG 238
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL +
Sbjct: 610 --------SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSSGTGDIYQCLRSYCKE 661
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPRE 291
E L C YCK + K I R P +L++ FKRFS++ TQ K+ +PI+FP
Sbjct: 662 EMLSGDEVWKCPYCKCERVATKQIIITRAPQILVIHFKRFSASKTQTARKIHTPIEFPLH 721
Query: 292 GLDMEYYISASGRRVESR------------------YTYDLCAVSNHIGKTALYGHYTAY 333
GL M+ ++ S ES +TYD V HIG + GHY +
Sbjct: 722 GLRMDDFV-YSPPSPESNGDPKATMPHDTTLATVPPFTYDAYGVLRHIGSSMSSGHYISL 780
Query: 334 CRREGTGRWYLYDD--TV-VSPVDAQTVESAEAEHGAYILVYQR 374
R W +DD TV +P D + + + E AYI+ Y+R
Sbjct: 781 VRDGARQCWRRFDDERTVDFNPRDLRNKDRLQNEQ-AYIVFYER 823
>gi|321453276|gb|EFX64527.1| hypothetical protein DAPPUDRAFT_66136 [Daphnia pulex]
Length = 294
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 150/327 (45%), Gaps = 48/327 (14%)
Query: 48 QGQLVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNE 107
+G++ D + + + +WS ++ K + A+ Y F G +QQD+ EFL L+ L+E
Sbjct: 1 RGEISDEVSSTLNALWSGQYRSISCKDLKNAVGRYKSSFRGYEQQDSHEFLTILVDWLHE 60
Query: 108 EAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
E + + +N + A WE + + SV +F GQ RS +RC+ C+
Sbjct: 61 ELNEIRVKRPLKEQNNYGIPDEKA--AAMAWEDYTDSNKSVIVKLFAGQQRSCLRCAVCR 118
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
+ S +E F+ LSLP+PP S+ +CS
Sbjct: 119 KESVTFEPFFNLSLPIPP-----------SNSQCS------------------------- 142
Query: 228 LYECLNKFFNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-SSNFTQKVTSP 285
+ EC + E + +C +CK + K +I +PPVL++ +RF + +K +
Sbjct: 143 IMECFQLYTKPEQISGWSCPFCKNKKGASKTIDIWEVPPVLVVHLQRFYNDGIWRKRLNM 202
Query: 286 IKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
+ F LD+E + S + + SRY L AVSNH G T GHYTAYC+ +W+ +
Sbjct: 203 VDFNLNDLDLEGVVK-SKKSLYSRYK--LYAVSNHYG-TMDAGHYTAYCKNAEYNKWFKF 258
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVY 372
DD V + V SA AYIL Y
Sbjct: 259 DDQDVMEISGNEVRSA----AAYILFY 281
>gi|195998045|ref|XP_002108891.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
gi|190589667|gb|EDV29689.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
Length = 333
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 160/374 (42%), Gaps = 74/374 (19%)
Query: 17 INSVLQCLSNT-PAFRNVL-------LNEDIPIHPDSKSQGQLVDALVNFMKMMWSSGNL 68
+NS+LQCL N+ P + L LN + P+ G++ + + W
Sbjct: 1 MNSILQCLINSVPLTKYFLTSTYRTDLNRENPL----GMHGEVAEEFATIVHASWCGEYR 56
Query: 69 VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNGSTYSNTSS 126
++ L + + +F GN Q D+QE L+ LL L+E+ V D S+
Sbjct: 57 YISPTDFKLTMSKFADRFAGNSQHDSQELLMILLDGLHEDINRVKQKDYIEDDDTSHLPD 116
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
++ + W++ + S+ ++F GQ +
Sbjct: 117 EEAANIA----WDRHKRRNQSIIVELFQGQFK---------------------------- 144
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECLNKFFNGETLHNT 244
S++ C C + S +++F LS+P+P TL +CL F E +
Sbjct: 145 ----------STLVCLTCNKRSVTFQVFMNLSVPLPSHRSHCTLNDCLELFSKAERVQGD 194
Query: 245 ----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
C CK + +K EI +LPPVL++ FKRFS + QK + + FP GL ++
Sbjct: 195 NKWFCSKCKCYREAMKKLEIWKLPPVLLIHFKRFSGTGLYWQKADTAVNFPVNGLTLKNQ 254
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
R Y+L AVSNH G T GHYTA+C+ WY +DD +VS + + V
Sbjct: 255 TVGPKHR-----HYNLYAVSNHYG-TLEGGHYTAFCQNPYAKEWYKFDDHIVSRISSNDV 308
Query: 359 ESAEAEHGAYILVY 372
+++ AYIL Y
Sbjct: 309 KTS----SAYILFY 318
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 176/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 280 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 337
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 338 LVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 395
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + +L K AS V + IF G L++ V C C
Sbjct: 396 -LQGGFNGVSRSVILQEN----SSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 450
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KRT + S P+ TL
Sbjct: 451 SRKFDPFLDLSLDIPS--------QFRN-------KRTKN------QESGPMC----TLR 485
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 486 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 545
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 546 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAHE--GRWF 603
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 604 HFNDSTVTLTDEETVGKAK----AYILFYVER 631
>gi|198461001|ref|XP_002138937.1| GA25084 [Drosophila pseudoobscura pseudoobscura]
gi|198137202|gb|EDY69495.1| GA25084 [Drosophila pseudoobscura pseudoobscura]
Length = 976
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 190/468 (40%), Gaps = 105/468 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQ------LVDAL 55
GL G+ N NTCY+NS LQ LSN P + +N + + D ++ + L +
Sbjct: 80 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIADQRANARICKPAGLAKSY 139
Query: 56 VNFMKMMWS---SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE--AK 110
+ M+ +WS + + IL +RS F G QQ D QEFL + L+EE +
Sbjct: 140 IRLMQEIWSEIEDPKEYIAPRGILYGIRSVHPIFRGYQQHDTQEFLRCFMDQLHEELTEQ 199
Query: 111 VVP----------DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS---------VFSD 151
V P Q N + N S A +++T E+S + ++
Sbjct: 200 VSPQSRQSQQRQNKQPNETDDENEDEVPPSSHSATGSESEYETCESSMSEIAGEVMINTE 259
Query: 152 IFVGQLRSSVRCSNC----------KRTSTVYEIFWELSLPVPPGGGTL---YECQLRSS 198
FV R+ + +R E + P+ + ++ +L S+
Sbjct: 260 FFVTPSRTVIGSGTATPEAPPKPQQQRKQKKRETSSDQKPPIESARSIISDVFDGKLLSA 319
Query: 199 VRCSNCKRTSTVYEIFWELSLPVPP----------------------------------- 223
V+C C R S+ E F +LSLP+P
Sbjct: 320 VQCLTCDRVSSRQETFQDLSLPIPTRDFLNVLHQTHSLSVQSLSAAETSSRTNDGWLAWM 379
Query: 224 ----------GGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLIL 269
TLY+C+ FF+ + L +C C K +K + LP VL +
Sbjct: 380 WGLFRSWLYGPSVTLYDCMASFFSADELKGDNMYSCSRCNKLRTGIKYSRVINLPEVLCI 439
Query: 270 WFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRY-TYDLCAVSNHIGKTAL 326
KRF + ++ K++S + FP EG DM Y+ ++ +S Y+L +V H G T
Sbjct: 440 HLKRFRHDLSYSSKISSHVIFPMEGFDMRPYVH---KQCKSEVPIYNLSSVICHHG-TVG 495
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT Y R GRWY +DD V+ V V++ + AY+L YQ+
Sbjct: 496 GGHYTCYARNTLNGRWYEFDDQFVTVVSPDVVQNCQ----AYVLFYQK 539
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 174/391 (44%), Gaps = 61/391 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSSVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E +
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ 277
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ +G+ +S S + ++V + +F G L++ V C C S
Sbjct: 278 GGFNGVSGTAILQENSSLAASNKCC------INGASTVVTAVFGGVLQNEVNCLICGTES 331
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
++ F +LSL +P Q RS KR+ + + PV +L +
Sbjct: 332 RKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLRD 366
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTS 284
CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV +
Sbjct: 367 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 426
Query: 285 PIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 427 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFH 484
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 485 FNDSTVTLTDEDTVGKAK----AYILFYVER 511
>gi|345315473|ref|XP_001514295.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like, partial
[Ornithorhynchus anatinus]
Length = 282
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 142/306 (46%), Gaps = 59/306 (19%)
Query: 55 LVNFMKMMW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--V 111
++ +W SS N V++ ++ Y +F G QQDAQEFL +LL L+ E +
Sbjct: 23 FARLIQALWTSSANDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRIM 82
Query: 112 VPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
V + + + ++ G W K+ E S D+FVGQ
Sbjct: 83 VRPKSHAENLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQ--------------- 123
Query: 172 VYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTL 228
++SS+ C+ C STV++ FW+LSLP+ G TL
Sbjct: 124 -----------------------MKSSLTCTECGYCSTVFDPFWDLSLPITKRGFPEVTL 160
Query: 229 YECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKV 282
+CL F + L TC C+ + +K + IQ+ P +L+L KRFS + T K+
Sbjct: 161 MDCLRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKL 220
Query: 283 TSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
T+ + FP + LD+ + S S Y+L AVSNH G T + GHYTAYCR TG W
Sbjct: 221 TTFVNFPLKDLDLREFASESSNHA----IYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEW 275
Query: 343 YLYDDT 348
+ ++D+
Sbjct: 276 HTFNDS 281
>gi|406603343|emb|CCH45135.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 815
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 171/398 (42%), Gaps = 70/398 (17%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GNTCY+NS++QCL TP F LN E + I+ ++G + + +
Sbjct: 456 GLYNIGNTCYMNSIIQCLLGTPPFLQFFLNGSYKEHVNINSKLGTKGIMAKFFAELAQAV 515
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
+ V K +A+ S F N QQD EFL ++L L+E+ + ++ N
Sbjct: 516 FKQNGRVYEPKNFKIAIGSLNTSFKNNDQQDCSEFLNFVLDGLHED---LNEEGNRPRLG 572
Query: 123 NTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ ++++ + WE++ T S +F GQ S ++C C TST Y+
Sbjct: 573 DLTTEEEELRERMPIRLASVIEWERYLKTNYSAVVALFQGQYLSQLKCLECGTTSTTYQA 632
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
F LSLP+P EL + P +L CL +F
Sbjct: 633 FSVLSLPIP------------------------------QEL-VQSPLEKISLKRCLEEF 661
Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT-QKVTSPIKFPR 290
E L C CK+ K I RLP L++ KRF + QK+T+ I++P
Sbjct: 662 TKLEVLDGDDRWNCSKCKQLRKSTKKITITRLPSNLVIHLKRFKTGVNLQKITTFIEYPF 721
Query: 291 EGLDMEYYISASGRRVESR-------------YTYDLCAVSNHIGKTALYGHYTAYCRRE 337
E +D+ Y + ES+ + Y+L VSNH G T + GHYT+Y +
Sbjct: 722 E-MDLTDYWPKVVSKEESKKLLTFPLRGQTPPFKYNLYGVSNHSG-TLVGGHYTSYVWKG 779
Query: 338 GTGRWYLYDDT-VVSPVDAQTVESAEAEHGAYILVYQR 374
+W +DDT +V V ++ AY+L Y R
Sbjct: 780 TNKKWCYFDDTRIVQNFTKTNVINS----NAYVLFYTR 813
>gi|317143438|ref|XP_001819478.2| ubiquitin hydrolase [Aspergillus oryzae RIB40]
gi|391864151|gb|EIT73449.1| ubiquitin carbon terminal hydrolase [Aspergillus oryzae 3.042]
Length = 1098
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 173/404 (42%), Gaps = 76/404 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+AN G TCY+NS +QCL+ T ++ + SQG + N ++ +W
Sbjct: 731 GLANFGVTCYMNSTIQCLNATMMLSRFFVDNRFRYYVQKNWKGSQGVMPGLFANLIRSLW 790
Query: 64 SSGNLVLNTKAILLALRSYTKKFDG----NQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
V+ + + R++ + + ++QQDA+EF + + L+E+ +
Sbjct: 791 KGDVEVI----VPTSFRNFCGRLNQEWAIDRQQDAKEFFDFTVDCLHEDLNI-------- 838
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ Q R L + E+ Q V + R C R +
Sbjct: 839 ------NWQRSPLRPLTFEEEMQRERMPVAKVSKIEWDRY------CHREESFI------ 880
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFNG 238
+L+ Q S +RC+ CKRTST YE F+ +S+ +P G G +Y+CL +
Sbjct: 881 --------SSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSSGTGDIYQCLRSYCKE 932
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPRE 291
E L C YCK + K I R P +L++ FKRFS++ TQ K+ +PI+FP
Sbjct: 933 EMLSGDEVWKCPYCKCERVATKQIIITRAPQILVIHFKRFSASKTQTARKIHTPIEFPLH 992
Query: 292 GLDMEYYISASGRRVESR------------------YTYDLCAVSNHIGKTALYGHYTAY 333
GL M+ ++ S ES +TYD V HIG + GHY +
Sbjct: 993 GLRMDDFV-YSPPSPESNGDPKATMPHDTTLATVPPFTYDAYGVLRHIGSSMSSGHYISL 1051
Query: 334 CRREGTGRWYLYDDTVV---SPVDAQTVESAEAEHGAYILVYQR 374
R W +DD +P D + + + E AYI+ Y+R
Sbjct: 1052 VRDGARQCWRRFDDERTVDFNPRDLRNKDRLQNEQ-AYIVFYER 1094
>gi|391327504|ref|XP_003738238.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Metaseiulus occidentalis]
Length = 779
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 199/471 (42%), Gaps = 115/471 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQGQLVDALVNFMKM- 61
GL G+ N GNTCY+N+ LQ LSN LN ++P+ ++ G+ + +++ KM
Sbjct: 47 GLAGLQNLGNTCYMNAALQALSNCTQLTEYFLNTPNLPL----RNNGRGANLAMSYSKMI 102
Query: 62 --MWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVP--- 113
MW + + + S F G QQDAQEFL L L++E K P
Sbjct: 103 LQMWHEKRPPCVVPSGVAYGINSVCPVFRGPTQQDAQEFLRCFLDQLHDELKNEFFPKKE 162
Query: 114 ---DQYNGSTYSNTSSKQVGSFRALHYWEK-------------FQTTEASVFSDIFVGQL 157
D+ + + ++ +A + E ++T ++ + S+ +
Sbjct: 163 QDEDEEGAEEHHRANEEEEDEDKASYDAEVAANSNNPDNKEDLYETCDSGLSSE----KS 218
Query: 158 RSSVRCSNCKRTST-------VYEIFWELSLPVPPGG------------GTLYECQLRSS 198
+S + ++ R+ + E+ +S PVP G +++ ++ SS
Sbjct: 219 EASEKTADNHRSLETSLGSFLIGELKKVISSPVPRGDLKRPTPSYRSIISDVFDGRMLSS 278
Query: 199 VRCSNCKRTSTVYEIFWELSLPVP-----------PGGG--------------------- 226
V+C C+ S+ E+F +LSLP+P P
Sbjct: 279 VQCFTCETVSSTEEVFQDLSLPIPSRYHLNRLHHGPSDADLTSSSTSLNSLASSQGQQGW 338
Query: 227 -----------------TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPP 265
+L +CL FF+ + L +C C K + VK + LP
Sbjct: 339 MDWLLRWLYSWVWGPSVSLTDCLAAFFSADELEGDNMYSCGKCNKLRNGVKYSKPMELPE 398
Query: 266 VLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGK 323
VL + KRF F+ K++S ++FP EGLDM + R + TY+L AV H G
Sbjct: 399 VLCIHLKRFRHELMFSTKISSYVQFPLEGLDMTPFTHPHAR--DKVTTYELTAVICHHG- 455
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
TA GHY Y + G+WY YDD V+ V+A TV + E AY+L Y++
Sbjct: 456 TAGMGHYICYAMNDCDGQWYEYDDVYVTQVEASTVANCE----AYVLFYRK 502
>gi|242764330|ref|XP_002340749.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus ATCC
10500]
gi|218723945|gb|EED23362.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus ATCC
10500]
Length = 1110
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 177/408 (43%), Gaps = 79/408 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS LQCLS+T +++ + SQG + N ++ +W
Sbjct: 738 GLTNFGVTCYMNSTLQCLSSTVIMSKFFIDDRFRYYVQKNWKGSQGVMPGLYANLIRSLW 797
Query: 64 SSGNLVLNTKAILLALRSYTKKFDG----NQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+ V+ I + R++ + + ++QQDA+EF +++ L+E+ +
Sbjct: 798 KNDVEVI----IPTSFRNFCGRLNREWAIDRQQDAKEFFDFVVDCLHEDLNI-------- 845
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ Q R L + E+ Q V + R C R +
Sbjct: 846 ------NWQRTQLRPLTFEEEMQRERMPVPKVSKIEWDRY------CHREESFI------ 887
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP-PGGGTLYECLNKFFNG 238
+L+ Q S ++C+ CKRTST YE F+ +S+ +P G G +Y+CL +
Sbjct: 888 --------SSLFAGQHASRLKCTTCKRTSTTYEAFYSISVEIPHTGTGDIYQCLQSYCQE 939
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPRE 291
E L C YCK + K I R P +L++ KRFS++ TQ K+ +P+ FP
Sbjct: 940 EMLSGDEVWKCPYCKCERVATKQIIITRAPQILVIHLKRFSASKTQSARKIHTPVDFPLH 999
Query: 292 GLDMEYYI-------SASGRRVESR---------------YTYDLCAVSNHIGKTALYGH 329
GL M+ ++ S SG + +TYD AV H+G T GH
Sbjct: 1000 GLRMDNFVIPYTPANSESGDQANDNGVSAAPPSLTPTTPPFTYDAYAVLRHLGSTLSGGH 1059
Query: 330 YTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
Y + R W +DD VS P D + + + E AYIL Y+R
Sbjct: 1060 YISLVRDAQRQCWRRFDDERVSDFNPRDLRFSDRLQNEQ-AYILFYER 1106
>gi|50288319|ref|XP_446588.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525896|emb|CAG59515.1| unnamed protein product [Candida glabrata]
Length = 947
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 172/402 (42%), Gaps = 76/402 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N +LQC+ T + LN + I I+ S+G L +M
Sbjct: 584 GLENMGNSCYMNCILQCIMGTNELSQIFLNNSYEKHININSKLGSKGVLARYFARLAHIM 643
Query: 63 WSSGNLVLNTKAIL------LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
+ AI+ +A+ S F QQD QEF +LL L+E+ +
Sbjct: 644 HQTSYDQEKKAAIVRPTQFRMAIASINSMFRNTNQQDCQEFCQFLLDGLHEDLNQCGNNP 703
Query: 117 NGSTYSNTSSK--QVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
S + K ++ S R WE+F TT SV D+F GQ S ++CS C TST
Sbjct: 704 PLKELSEEAEKKRELLSLRIASSIEWERFLTTNFSVIIDLFQGQYASRLKCSVCSNTSTT 763
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
Y+ F LS+P+P G +SSV L +C
Sbjct: 764 YQPFSVLSVPLPTGT--------KSSV---------------------------NLMDCF 788
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKF 288
N+F E L + C CKK+ K I RLP LI+ KRF N K T I +
Sbjct: 789 NEFTKCEKLEHDEYWNCPTCKKKQPSTKQLTITRLPRNLIIHLKRF-DNRMNKNTKLIDY 847
Query: 289 PREGLDMEYYIS----------ASGRRVESR-----YTYDLCAVSNHIGKTALY-GHYTA 332
P LD+ + + S + +R + Y L AV+NH G +LY GHYT+
Sbjct: 848 PF-NLDLTSFWANDKDDRLPPGVSIDELPARGQIPPFKYSLYAVANHFG--SLYGGHYTS 904
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
Y + + WY +DD V +T E + AY+L Y+R
Sbjct: 905 YVNKGLSRGWYYFDDQNYRLV-KKTSEVVNS--NAYVLFYRR 943
>gi|328778708|ref|XP_001122214.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like, partial
[Apis mellifera]
Length = 867
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 195/470 (41%), Gaps = 110/470 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMM 62
GL G+ N GNTCY+N+ LQ LSN P L+ + SK + L + +N ++ M
Sbjct: 134 GLVGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDM 193
Query: 63 W---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYN 117
W + G +V IL +R+ F G Q D QEFL + L+EE K + D+ N
Sbjct: 194 WNRKTRGYVV--PHGILSGIRTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDN 251
Query: 118 -------GSTYSNTSSKQV---GSFRALHYWEKFQT--TEASVFSDIFVGQLRSSVRCSN 165
G S+ ++ GS ++ +E + +E S SD G+ + R S
Sbjct: 252 ILRLKGLGEQSSDEDETEIDGNGSSQSDAEYETCDSGVSEQSSLSD--EGERGTKRRYSR 309
Query: 166 CKRTSTVYEIFWELSLPVP--------PGGGT---------------------LYECQLR 196
+T + F S+ P T +++ +L
Sbjct: 310 VSQTEKLRSKFTNRSIKKSTVDQPFSQPQRSTQNSPVKYRTKKQMKTRSIISDIFDGKLL 369
Query: 197 SSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------------------------ 226
SSV+C C R ST E F +LSLP+P
Sbjct: 370 SSVQCLTCDRISTRVETFQDLSLPIPSRDHIDMLHQGPLTPQKAGPCSDVVYVTNQSGWL 429
Query: 227 ----------------TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPV 266
+L++CL+ FF+ + L +C+ C K + +K ++ LP +
Sbjct: 430 SWFLQWMRSWFWGPVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEI 489
Query: 267 LILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKT 324
L + KRF F+ K+ + + FP EGLDM Y+ V YDL +V H G T
Sbjct: 490 LCVHLKRFRHELMFSSKIANYVSFPLEGLDMRPYLHKEC--VSKVTMYDLISVICHHG-T 546
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
A GHYT Y +W+ +DD V+ V ++TV+ E AY+L Y++
Sbjct: 547 AGGGHYTCYALNPIVNKWFEFDDQCVTEVSSETVKHCE----AYVLFYKK 592
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 177/392 (45%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 107 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDVNVS 164
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 165 LVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 222
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +++GS++S S Q R+ K AS V + +F G L++ V C C
Sbjct: 223 -LQGEFDGSSHSVLS--QANCSRSAS--NKCCINGASTVVTSVFGGVLQNEVNCLICGTE 277
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ RC N + T TL
Sbjct: 278 SRKFDPFLDLSLDIPS--------QFRNK-RCKNQENGPTC----------------TLR 312
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L TC CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 313 DCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 372
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ + FP GLDM+ ++ YDL AV H G GHYTAY + GRW+
Sbjct: 373 TYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHK--GRWF 430
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ + +TV A+ AYIL Y R
Sbjct: 431 HFNDSTVTLTEEETVAKAK----AYILFYVER 458
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 177/392 (45%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 162 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDVNVS 219
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 220 LVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 277
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +++GS++S S Q R+ K AS V + +F G L++ V C C
Sbjct: 278 -LQGEFDGSSHSVLS--QANCSRSA--CNKCCINGASTVVTSVFGGVLQNEVNCLICGTE 332
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ RC N + T TL
Sbjct: 333 SRKFDPFLDLSLDIPS--------QFRNK-RCKNQENGPTC----------------TLR 367
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L TC CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 368 DCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 427
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ + FP GLDM+ ++ YDL AV H G GHYTAY + GRW+
Sbjct: 428 TYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHK--GRWF 485
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ + +TV A+ AYIL Y R
Sbjct: 486 HFNDSTVTLTEEETVAKAK----AYILFYVER 513
>gi|290988758|ref|XP_002677060.1| predicted protein [Naegleria gruberi]
gi|284090665|gb|EFC44316.1| predicted protein [Naegleria gruberi]
Length = 320
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 168/356 (47%), Gaps = 45/356 (12%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++NS LQCL + R+ L++ I+P K +G L ++ + S
Sbjct: 1 GLKNIGNTCFMNSTLQCLCSIQPIRDYFLSQ-FKINP--KKEGNLATQFSALLRSLTSVD 57
Query: 67 NLV--LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
+L +N L YT F GN QQD+QEFL Y+L L+E+ + ++ +
Sbjct: 58 DLYTPVNPIDFKRTLNQYTSLFRGNDQQDSQEFLRYVLDGLSEDTNRIVEKPKYEELEDI 117
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
+++ + ++ ++ + +S +D+F+GQL+S ++C C R S ++ F ++ LP+
Sbjct: 118 ANENIID-QSNRWFRNYIERSSSFVTDLFLGQLKSEIKCLVCGRQSVTFDPFLDICLPI- 175
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
N KR Y I ++ + +L ECL KF E L
Sbjct: 176 ------------------NLKRGRKSY-ISYDRDV-------SLEECLLKFTEEECLGGI 209
Query: 245 ----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
C CKK D K+ R+P VL++ KRFS++ QK+ + E L+ Y++
Sbjct: 210 EQVYCSSCKKHQDTSKVLSFFRVPEVLVIQLKRFSND--QKLLDQVNLC-ELLEFNNYVA 266
Query: 301 --ASGRRVESR-YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
A+ + ++ TY L V H G + GHY R G+W Y+D+ V V
Sbjct: 267 PEAADKIYNNQPITYQLMGVIKHFG-SLRGGHYICQVRN-AEGQWIEYNDSAVKNV 320
>gi|313241942|emb|CBY34144.1| unnamed protein product [Oikopleura dioica]
Length = 649
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 163/375 (43%), Gaps = 78/375 (20%)
Query: 5 LNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD--SKSQGQLVDALVN-FMKM 61
L GI N+GN CYI++ LQCL R LL+ + H + S + G++ + F KM
Sbjct: 343 LAGIKNSGNNCYISTALQCLYRMEDLREFLLSGEYKKHLNKTSPADGEIAELTAEIFGKM 402
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
N+ + + A+ ++ F+ ++Q+DA+EFLL L+ L+ + + +
Sbjct: 403 KNLESNISIAD--LKDAVSEFSGMFENDEQEDAEEFLLTLIDGLHLDLEKSSGFVESANV 460
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N+S W ++ + E S + +FVGQ S++
Sbjct: 461 PNSSE---------EAWNQYISEENSFLTSLFVGQAESTLT------------------- 492
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
C C+ ++ +E FW +SLP+ G ++ EC+ KF ETL
Sbjct: 493 -------------------CLACQESTKNWESFWNISLPIS-GSSSIEECIEKFQKSETL 532
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
C+ C+K+ D+ K I ++P L+L KRFSS K +S IKFP
Sbjct: 533 TGEDQPFCESCQKKCDMTKSLRISKIPKTLLLHLKRFSSK--SKDSSLIKFP-------- 582
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
+ L +V NH GK+ GHY A R G W+ D VS + +
Sbjct: 583 ---VDSSLSLESSEFKLSSVINHQGKSTSSGHYLASVRH--NGNWFSISDEKVSCL--EK 635
Query: 358 VESAEAEHGAYILVY 372
VESA+ AY+L Y
Sbjct: 636 VESAD----AYVLFY 646
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 142 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 199
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 200 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 257
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG S+ + L K AS V + IF G L++ V C C
Sbjct: 258 -LQGGFNGVPRSSILQEN----STLSANNKCCINGASTVVTAIFGGILQNEVNCLICGTE 312
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + S PV +L
Sbjct: 313 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QESGPVC----SLR 347
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 348 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 407
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 408 TYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 465
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 466 HFNDSTVTVTDEETVGKAK----AYILFYVER 493
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 75 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 132
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 133 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 190
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG S+ + L K AS V + IF G L++ V C C
Sbjct: 191 -LQGGFNGVPRSSILQEN----STLSANNKCCINGASTVVTAIFGGILQNEVNCLICGTE 245
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + S PV +L
Sbjct: 246 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QESGPVC----SLR 280
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 281 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 340
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 341 TYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 398
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 399 HFNDSTVTVTDEETVGKAK----AYILFYVER 426
>gi|380015099|ref|XP_003691548.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Apis
florea]
Length = 915
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 195/470 (41%), Gaps = 110/470 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMM 62
GL G+ N GNTCY+N+ LQ LSN P L+ + SK + L + +N ++ M
Sbjct: 182 GLVGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDM 241
Query: 63 W---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYN 117
W + G +V IL +R+ F G Q D QEFL + L+EE K + D+ N
Sbjct: 242 WNRKTRGYVV--PHGILSGIRTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDN 299
Query: 118 -------GSTYSNTSSKQV---GSFRALHYWEKFQT--TEASVFSDIFVGQLRSSVRCSN 165
G S+ ++ GS ++ +E + +E S SD G+ + R S
Sbjct: 300 VLRLKGLGEQSSDEDETEIDGNGSSQSDAEYETCDSGVSEQSSLSD--EGERGTKRRYSR 357
Query: 166 CKRTSTVYEIFWELSLPVP--------PGGGT---------------------LYECQLR 196
+T + F S+ P T +++ +L
Sbjct: 358 VSQTEKLRSKFTNRSIKKSTVDQPFSQPQRSTQNSPVKYRTKKQMKTRSIISDIFDGKLL 417
Query: 197 SSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------------------------ 226
SSV+C C R ST E F +LSLP+P
Sbjct: 418 SSVQCLTCDRISTRVETFQDLSLPIPSRDHIDMLHQGPLTPQKAGPCSDVVYVTNQSGWL 477
Query: 227 ----------------TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPV 266
+L++CL+ FF+ + L +C+ C K + +K ++ LP +
Sbjct: 478 SWFLQWMRSWFWGPVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEI 537
Query: 267 LILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKT 324
L + KRF F+ K+ + + FP EGLDM Y+ V YDL +V H G T
Sbjct: 538 LCVHLKRFRHELMFSSKIANYVSFPLEGLDMRPYLHKEC--VSKVTMYDLISVICHHG-T 594
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
A GHYT Y +W+ +DD V+ V ++TV+ E AY+L Y++
Sbjct: 595 AGGGHYTCYALNPIVNKWFEFDDQCVTEVSSETVKHCE----AYVLFYKK 640
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 174/391 (44%), Gaps = 61/391 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E +
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ 277
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ + S +S S + ++V + IF G L++ V C C S
Sbjct: 278 GGFNGVSRSVILQENSSLTASSKCC------INGASTVVTAIFGGILQNEVNCLICGTES 331
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
++ F +LSL +P Q R+ KRT + + P+ TL +
Sbjct: 332 RKFDPFLDLSLDIPS--------QFRN-------KRTKN------QENGPM----CTLRD 366
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTS 284
CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV +
Sbjct: 367 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 426
Query: 285 PIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 427 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWFH 484
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 485 FNDSTVTLTDEETVVKAK----AYILFYVER 511
>gi|324502429|gb|ADY41070.1| Ubiquitin carboxyl-terminal hydrolase 33 [Ascaris suum]
Length = 1035
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 126/247 (51%), Gaps = 23/247 (9%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
S+ S++F G+LRS+V+C C+ S +E F +LSL + P L +
Sbjct: 522 SIVSEVFDGELRSAVKCLTCQHVSETHETFQDLSLSI-PTKEQLERIAAAKDDDDQDMSV 580
Query: 207 TSTVYEIFWELSLPVPPG----------GGT--LYECLNKFFNGETLHN----TCQYCKK 250
+ Y W+ G GG+ L + L+ FF+ + L +C+ C K
Sbjct: 581 ANGGYSSVWQWPWWFGLGWLRSVYAYLFGGSVSLMDALSAFFSPDDLRGENMYSCEKCSK 640
Query: 251 QSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYISASGRRVES 308
+ VK+ +I +LP +L + KRF ++++ KV++ + FP LD+ +++ S R E
Sbjct: 641 LRNGVKMCKITQLPEILCIHLKRFRHDASYSSKVSTSVTFPVCDLDLSPFVTQSVRTQEK 700
Query: 309 RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAY 368
+ YDLCA +H G TA GHY AYCR E WY +DDT+V+ ++ V E AY
Sbjct: 701 KTLYDLCAFVSHQGSTADSGHYLAYCRNEVDNNWYEFDDTIVTRLEVADVMGKE----AY 756
Query: 369 ILVYQRR 375
+L YQRR
Sbjct: 757 VLFYQRR 763
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-------SQGQLVDALV 56
GL G+ N GNTCY+N+ +Q LSN + L + P S S+ + +
Sbjct: 252 GLTGLCNLGNTCYLNAAVQALSNCAPLAD-LFRSSATMAPFSSQLAFSRGSEPPVSRSFR 310
Query: 57 NFMKMMWSSGNLVLNTKAILLA-LRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
++ +WS + +LL +R++ +F G QQD+QEF+ L L+ E +
Sbjct: 311 LLLQSIWSPARSGCTSPHLLLTQVRTHCPQFRGWAQQDSQEFIRCFLDLLHRELR 365
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFYVER 511
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 71 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 128
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 129 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 186
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 187 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 241
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 242 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPVC----SLR 276
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 277 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 336
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 337 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 394
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 395 HFNDSTVTLTDEETVVKAK----AYILFYVER 422
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFYVER 511
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 195
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 196 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 253
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 254 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 308
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 309 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 343
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 344 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 403
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 404 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 461
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 462 HFNDSTVTLTDEETVVKAK----AYILFYVER 489
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 173
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 174 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 231
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 232 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 286
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 287 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 321
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 322 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 381
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 382 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 439
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 440 HFNDSTVTLTDEETVVKAK----AYILFYVER 467
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 195
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 196 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 253
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 254 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 308
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 309 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 343
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 344 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 403
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 404 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 461
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 462 HFNDSTVTLTDEETVVKAK----AYILFYVER 489
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFYVER 511
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 71 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 128
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 129 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 186
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 187 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 241
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 242 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPVC----SLR 276
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 277 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 336
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 337 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 394
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 395 HFNDSTVTLTDEETVVKAK----AYILFYVER 422
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 112 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 169
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 170 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 227
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + AL K AS V + IF G L++ V C C
Sbjct: 228 -LQGGFNGVSRSAILQEN----SALSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 282
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 283 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPVC----SLR 317
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 318 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 377
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 378 TYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 435
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 436 HFNDSTVTLTDEDTVVKAK----AYILFYVER 463
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 131 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 188
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 189 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 246
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 247 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 301
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 302 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPVC----SLR 336
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 337 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 396
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 397 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 454
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 455 HFNDSTVTLTDEETVVKAK----AYILFYVER 482
>gi|340717142|ref|XP_003397046.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
terrestris]
Length = 935
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 195/469 (41%), Gaps = 107/469 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMM 62
GL G+ N GNTCY+N+ LQ LSN P L+ + SK + L + +N ++ M
Sbjct: 201 GLVGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDM 260
Query: 63 W---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYN 117
W + G +V IL +R+ F G Q D QEFL + L+EE K + D+ N
Sbjct: 261 WNKKTRGYVV--PHGILSGIRTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDN 318
Query: 118 -------GSTYSNTSSKQV---GSFRALHYWEKFQT--TEASVFSD----------IFVG 155
G S+ ++ GS ++ +E + +E S SD V
Sbjct: 319 VLRLKGLGEQSSDEDETEIDGNGSSQSDAEYETCDSGVSEQSSLSDEGERGTKRRYSRVS 378
Query: 156 Q---LRSSVRCSNCKRTSTVYEIFWEL---------------SLPVPPGGGTLYECQLRS 197
Q LRS N K+++ + F + + +++ +L S
Sbjct: 379 QSEKLRSKFTNRNIKKSTVESQPFSQQQRSTQNSPVKYRTKKQMKTRSIISDIFDGKLLS 438
Query: 198 SVRCSNCKRTSTVYEIFWELSLPVPPGGG------------------------------- 226
SV+C C R ST E F +LSLP+P
Sbjct: 439 SVQCLTCDRISTRVETFQDLSLPIPSRDHIDMLHQGPLTPQKAGPCSDVVYVTNQSGWLS 498
Query: 227 ---------------TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVL 267
+L++CL+ FF+ + L +C+ C K + +K ++ LP +L
Sbjct: 499 WFLQWMRSWFWGPVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEIL 558
Query: 268 ILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTA 325
+ KRF F+ K+ + + FP EGLDM Y+ V YDL +V H G TA
Sbjct: 559 CVHLKRFRHELMFSSKIANYVSFPLEGLDMRPYLHKEC--VSKVTMYDLISVICHHG-TA 615
Query: 326 LYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT Y +W+ +DD V+ V +TV+ E AY+L Y++
Sbjct: 616 GGGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCE----AYVLFYKK 660
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 130 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 187
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 188 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 245
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 246 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 300
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 301 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPVC----SLR 335
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 336 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 395
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 396 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 453
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 454 HFNDSTVTLTDEETVVKAK----AYILFYVER 481
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 130 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 187
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 188 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 245
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 246 -LQGGFNGVSRSVILQENA----TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 300
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KRT + + P+ TL
Sbjct: 301 SRKFDPFLDLSLDIPS--------QFRN-------KRTKN------QENGPMC----TLR 335
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 336 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 395
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 396 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWF 453
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 454 HFNDSTVTLTDEETVVKAK----AYILFYVER 481
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 174/389 (44%), Gaps = 63/389 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDTSVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAVLQEN----STLSASSKCCVNGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSDPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 484 HFNDSTVTLTDEETVGKAK----AYILFY 508
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 174/391 (44%), Gaps = 61/391 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 143 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 200
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E +
Sbjct: 201 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ 260
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ + S +S GS + ++V + IF G L++ V C C S
Sbjct: 261 GGFNGVSRSAILQENSALSGSNKCC------INGASTVVTAIFGGILQNEVNCLICGTES 314
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
++ F +LSL +P Q R+ KR+ + + PV +L +
Sbjct: 315 RKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPVC----SLRD 349
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTS 284
CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV +
Sbjct: 350 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 409
Query: 285 PIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 410 YVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFH 467
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 468 FNDSTVTLTDEDTVVKAK----AYILFYVER 494
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 172/388 (44%), Gaps = 60/388 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNGVS 218
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 219 LVEEFRKTLCALWQGSQAAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHRE-- 276
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ +NG + S+ ++ A ++V + IF G L++ V C C S
Sbjct: 277 -LQGGFNGVSRSSVLLQENSGLSA--GGRCCINGASTVVTAIFGGILQNEVNCLICGTES 333
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
++ F +LSL +P Q R+ R N + T TL +
Sbjct: 334 RKFDPFLDLSLDIPS--------QFRNK-RSKNQENGPTC----------------TLRD 368
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTS 284
CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV +
Sbjct: 369 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 428
Query: 285 PIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++FP GLDM+ ++ YDL AV H G GHYTAY E GRW+
Sbjct: 429 YVEFPLRGLDMKCFLLEPENSRPENCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWFH 486
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 487 FNDSTVTLTDEETVLRAK----AYILFY 510
>gi|350416461|ref|XP_003490956.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
impatiens]
Length = 916
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 194/469 (41%), Gaps = 107/469 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMM 62
GL G+ N GNTCY+N+ LQ LSN P L+ + SK + L + +N ++ M
Sbjct: 182 GLVGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDM 241
Query: 63 WSS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYN 117
W+ G +V IL +R+ F G Q D QEFL + L+EE K + D+ N
Sbjct: 242 WNKKTRGYVV--PHGILSGIRTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDN 299
Query: 118 -------GSTYSNTSSKQV---GSFRALHYWEKFQT--TEASVFSD----------IFVG 155
G S+ ++ GS ++ +E + +E S SD V
Sbjct: 300 VLRLKGLGEQSSDEDETEIDGNGSSQSDAEYETCDSGVSEQSSLSDEGERGTKRRYSRVS 359
Query: 156 Q---LRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---------------GTLYECQLRS 197
Q LRS N K+++ + F + +++ +L S
Sbjct: 360 QSEKLRSKFTNRNIKKSTVESQPFSQQQRSTQNSPVKYRTKKQMKTRSIISDIFDGKLLS 419
Query: 198 SVRCSNCKRTSTVYEIFWELSLPVPPGGG------------------------------- 226
SV+C C R ST E F +LSLP+P
Sbjct: 420 SVQCLTCDRISTRVETFQDLSLPIPSRDHIDMLHQGPLTPQKAGPCSDVVYVTNQSGWLS 479
Query: 227 ---------------TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVL 267
+L++CL+ FF+ + L +C+ C K + +K ++ LP +L
Sbjct: 480 WFLQWMRSWFWGPVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEIL 539
Query: 268 ILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTA 325
+ KRF F+ K+ + + FP EGLDM Y+ V YDL +V H G TA
Sbjct: 540 CVHLKRFRHELMFSSKIANYVSFPLEGLDMRPYLHKEC--VSKVTMYDLISVICHHG-TA 596
Query: 326 LYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT Y +W+ +DD V+ V +TV+ E AY+L Y++
Sbjct: 597 GGGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCE----AYVLFYKK 641
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 75 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 132
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 133 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 190
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 191 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 245
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 246 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPVC----SLR 280
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 281 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 340
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 341 TYVEFPLRGLDMKCYLLEPENSGLESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 398
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 399 HFNDSTVTLTDEETVVKAK----AYILFYVER 426
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 176/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 134 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 191
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E +
Sbjct: 192 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ 251
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+NG + S + G L K AS V + IF G L++ V C C
Sbjct: 252 ---GGFNGVSRSVILQENSG----LSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 304
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + P+ +L
Sbjct: 305 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPM----CSLR 339
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 340 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 399
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 400 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 457
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 458 HFNDSTVTLTDEETVVKAK----AYILFYVER 485
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 173/397 (43%), Gaps = 86/397 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP-IHPDSKSQGQ--------------- 50
G+ N GNTC++N++LQ LSN F +++P I + K+ +
Sbjct: 150 GLRNLGNTCFMNAILQSLSNLKYFSGYF--KELPAIELNVKNMDEQTKKYYTRSYQSDDI 207
Query: 51 -LVDALVNFMKMMWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
LV+ L + +W G N ++ +++ + +F G QQ DA EF+ LL ++ E
Sbjct: 208 SLVEELRKVLCALWQQGSNTAISPESLFTVVWKVVPRFRGYQQHDAHEFMHCLLDRVHNE 267
Query: 109 AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
L ++F ++ S IF GQL+S V C C
Sbjct: 268 --------------------------LLTSKRFTNGCDTIISGIFGGQLQSDVTCLTCGT 301
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
S E + +LSL +P + ++ S K+ + P L
Sbjct: 302 ISKKQEAYRDLSLDIP----------FKPKLKTSPGKKKT--------------PSACQL 337
Query: 229 YECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKV 282
+CL F ETL + C+ C K+ K + I RLP VL L KRF S KV
Sbjct: 338 IDCLQSFVEMETLDESEWYMCEKCNKKQPSTKKFWILRLPNVLCLHLKRFRYSPLARTKV 397
Query: 283 TSPIKFPREGLDMEYYISASGRRVE----SRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
+ ++FP + L+M+ +I + ++ + YDL A H G A GHYT Y R EG
Sbjct: 398 DTFVRFPIKELNMDPFILKTNQKTNRMSIKAHLYDLAACVVHHGSGAGSGHYTTYARHEG 457
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ WY ++D+ VS + ++++ + AYIL Y R+
Sbjct: 458 S--WYNFNDSSVSLTNEESIQHCK----AYILFYTRQ 488
>gi|307172608|gb|EFN63967.1| Ubiquitin carboxyl-terminal hydrolase 8 [Camponotus floridanus]
Length = 971
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 159/359 (44%), Gaps = 79/359 (22%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
+ PG+ G+ N GN+CY+NS++QCLSNT + D L
Sbjct: 670 VHPGITGLKNLGNSCYMNSIIQCLSNTTNLAKYF------------TDNSYADDLNTTND 717
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLA----ALNEEAKVVPDQY 116
M S + + +A+ + +F+ +QQD+ EFL +LL L +EAK+ +
Sbjct: 718 NMTRS---QVVEEVAQVAVGQHKLQFENYEQQDSHEFLTFLLDWMHNDLKKEAKMPIEMT 774
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N A W+K ++ S+ SD+F GQLRS++ CS CK+ ST YE F
Sbjct: 775 N----------------AEKEWDKAMNSQRSIISDLFFGQLRSTITCSFCKQASTTYETF 818
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
L++ L S RC TL +C+ KF
Sbjct: 819 NSLTM------------SLSQSNRC-------------------------TLNDCMEKFV 841
Query: 237 NGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGL 293
G+ + C C+ D K ++ +L P++++ RF+ + +K + + FP G
Sbjct: 842 TGQKVSGWKCPKCQTPRDATKKFDFVKLAPIVVIHLNRFADTGGWLEKRNTAVDFPLTGF 901
Query: 294 DMEYYISASGRRVES---RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
+++ Y+ + + Y Y+L A+SNH G T GHYTA+C+ ++ +++ +
Sbjct: 902 NLKPYLVVENTKAMNNIRNYNYNLYAMSNHYG-TMEGGHYTAFCKNATYNKYDEWEEKI 959
>gi|444517773|gb|ELV11787.1| Ubiquitin carboxyl-terminal hydrolase 20 [Tupaia chinensis]
Length = 752
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 177/418 (42%), Gaps = 64/418 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 125 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPA--LCKSYQKLVSEVW 182
Query: 64 SSG--------NLVLNTKAILLALRSYTKKF--------DGNQQQDAQEFLLYLLAALNE 107
+L K + R Y ++ D + + +
Sbjct: 183 HKKRPSYVVPTSLSHGIKLVNPMFRGYAQQHGPLSAPEPDNDACARSSSRPCSPVHLHEA 242
Query: 108 EAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEA--SVFSDIFVGQLRSSVRCSN 165
AK+ S S + + L + + + SV SDIF G + S V+C
Sbjct: 243 HAKLSSSPPRASPVRMGPSYVLKKAQVLSTGSRRRKEQHYRSVISDIFDGSILSLVQCLT 302
Query: 166 CKRTSTVYEIFWELSLPVP-------------------PGG-GTLYECQLRSSVRCSNCK 205
C R ST E F +LSLP+P PG G Y Q + +
Sbjct: 303 CDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIR 362
Query: 206 R--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYE 259
R S FW PV TL +CL FF + L +C+ CKK + VK +
Sbjct: 363 RFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCK 415
Query: 260 IQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYT-YDLCA 316
+ RLP +L + KRF ++ K++S + FP EGLD+ +++ + S+ T YDL +
Sbjct: 416 VLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLA---KECTSQITAYDLLS 472
Query: 317 VSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
V H G TA GHY AYC+ G+WY +DD V+ V V++AE AY+L Y++
Sbjct: 473 VICHHG-TAGSGHYVAYCQNVINGQWYEFDDQYVTEVHETVVQNAE----AYVLFYRK 525
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG+
Sbjct: 132 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGENNVS 189
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 190 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 247
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG S +S Q S L K AS V + IF G L++ V C C
Sbjct: 248 -LQGGFNG--ISRSSILQENS--TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 302
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ R N + T +L
Sbjct: 303 SRKFDPFLDLSLDIPS--------QFRNK-RSKNQENGPTC----------------SLR 337
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 338 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 397
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 398 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 455
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 456 HFNDSTVTLTDEDTVLKAK----AYILFYVER 483
>gi|315040860|ref|XP_003169807.1| ubiquitin carboxyl-terminal hydrolase 2 [Arthroderma gypseum CBS
118893]
gi|311345769|gb|EFR04972.1| ubiquitin carboxyl-terminal hydrolase 2 [Arthroderma gypseum CBS
118893]
Length = 1077
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 178/432 (41%), Gaps = 108/432 (25%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---DIPIHPDSK-----SQGQLVDALVNF 58
G+ N G+TCY+NS++Q LS T +LL + D H + SQG L N
Sbjct: 686 GLINLGSTCYMNSIIQSLSAT-----ILLTKFFVDNRFHTQVQKNWKGSQGVLPGLFANL 740
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPD 114
++ +W + V+ + + ++ G+QQQDA+EF L+ L+E+ + P
Sbjct: 741 IRSLWKNDVEVIRPTSFRKFVGRLNTEWAGSQQQDAKEFFDVLVDCLHEDLNLHWQRTP- 799
Query: 115 QYNGSTYSNTSSKQVGSFRALH--YWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
T++ ++ + W ++ E S S +F GQ S +RC+ C++TST
Sbjct: 800 -LRPLTFAEEMRREQMPIHKVSDIEWARYSHRELSYVSSLFAGQHASRLRCTTCRKTSTT 858
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL 232
YE F+ +S+ +P G G +Y+CL
Sbjct: 859 YEAFYSISVEIPVTG-------------------------------------TGDIYQCL 881
Query: 233 NKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSP 285
+ E L C YCK++ + K + R P L+ FKRFS++ Q K+ +P
Sbjct: 882 KSYCQEEVLSGDEVWKCPYCKREREAAKQIILTRAPRFLVFHFKRFSASRRQQARKIHTP 941
Query: 286 IKFPREGLDMEYYI-----------------SASGRRVESR------------------- 309
+ FP GLDM ++ +++G ++S+
Sbjct: 942 VSFPLSGLDMTPFMIQHPQHTQSSRPVSPLPNSNGDTLDSKSNSHPSSKSQSVLASHDLA 1001
Query: 310 ----YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAE 362
Y Y+ AV H+G T GHY + R E W +DD V+ P +++
Sbjct: 1002 TSTPYIYNAYAVVRHLGSTMNEGHYISLVRDEQRKCWRKFDDQRVTDFQPSSSRSSPDNL 1061
Query: 363 AEHGAYILVYQR 374
AY++ Y+R
Sbjct: 1062 QNEQAYLVFYER 1073
>gi|156846814|ref|XP_001646293.1| hypothetical protein Kpol_1032p28 [Vanderwaltozyma polyspora DSM
70294]
gi|239977663|sp|A7TGY3.1|UBP4_VANPO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|156116968|gb|EDO18435.1| hypothetical protein Kpol_1032p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 882
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 168/403 (41%), Gaps = 79/403 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QCL +T + LN + I ++ S+G L + M
Sbjct: 520 GLENMGNSCYMNCIIQCLLSTHELSQIFLNNSYEKHINLNSKLGSKGVLAKYFARLVHTM 579
Query: 63 WSSG--------NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV-- 112
+ G N + +A S F N QQD+QEF +LL L+E+
Sbjct: 580 YREGSFKRPLEKNKPIQPIQFKMACGSINSLFKDNTQQDSQEFCQFLLDGLHEDLNQCGA 639
Query: 113 --PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
P + K + WE+F TT+ SV D+F GQ S ++C C TS
Sbjct: 640 NPPLKELSEDAEKMREKLSMRIASSIEWERFLTTDFSVIVDLFQGQYASQLKCKVCGCTS 699
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
T Y+ F LS+PVP S+C + +
Sbjct: 700 TTYQTFSVLSVPVP---------------HVSSCH----------------------ILD 722
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPI 286
C N+F E L +C CKK+ K I RLP LI+ KRF N K +
Sbjct: 723 CFNEFTKVEKLGTDELWSCPTCKKKQPSTKKLTITRLPRNLIIHLKRF-DNMMNKNNVFV 781
Query: 287 KFPREGLDMEYYISA--SGR-------RVESR-----YTYDLCAVSNHIGKTALY-GHYT 331
K+P LD+ Y + GR + +R + Y L AV++H+G +LY GHYT
Sbjct: 782 KYPF-LLDLTPYWANDFDGRLPPGVTDELPTRGQVPPFRYKLNAVASHVG--SLYGGHYT 838
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
AY + W+ +DDT P+ E+ AY+L Y R
Sbjct: 839 AYVNKGINRGWHYFDDTSYRPIKN---ETECITPNAYVLFYHR 878
>gi|194756894|ref|XP_001960705.1| GF13485 [Drosophila ananassae]
gi|190622003|gb|EDV37527.1| GF13485 [Drosophila ananassae]
Length = 981
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 187/464 (40%), Gaps = 100/464 (21%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQ----GQLVDALVN 57
GL G+ N NTCY+NS LQ LSN P + +N E + D ++ L +
Sbjct: 76 GLVGLQNIANTCYMNSALQALSNLPPMTHFFINCSELVEYIADQSARRCKPAGLAKSYRR 135
Query: 58 FMKMMW---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE----AK 110
M+ +W + + IL +RS F G QQ D QEFL + L+EE
Sbjct: 136 LMQDIWQDIEDRKDFIAPRGILYGIRSVHPMFRGYQQHDTQEFLRCFMDQLHEELTEQVS 195
Query: 111 VVPDQYNGS-----TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN 165
++P ++ + T + + G+ ++ T E+S+ L++ +
Sbjct: 196 LLPQPHSQAQKPNETDEDNEEEAAGASHTPASESEYDTCESSMSDRSAEVLLKTEYFVTP 255
Query: 166 CK--RTSTVYEIFWELSLPVPPGG----------------------GTLYECQLRSSVRC 201
C+ +S+ ++ LP +++ +L SSV+C
Sbjct: 256 CRTQSSSSALPDAHQVHLPQVQTQQQQQNTSASSDQKPVESARSIISDVFDGKLLSSVQC 315
Query: 202 SNCKRTSTVYEIFWELSLPVP--------------------------------------- 222
C R ST E F +LSLP+P
Sbjct: 316 LTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAAETSARSNEGWLAWMWNV 375
Query: 223 ------PGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFK 272
TLY+C+ FF+ + L +C+ C K +K + LP VL + K
Sbjct: 376 LRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLK 435
Query: 273 RFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHY 330
RF + ++ K++S + FP EG DM YI + Y+L +V H G T GHY
Sbjct: 436 RFRHDLSYSSKISSDVYFPLEGFDMRPYIHKDCK--SQVPLYNLSSVICHHG-TVGGGHY 492
Query: 331 TAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
T Y R GRWY +DD V+ V +TV + + AY+L YQ+
Sbjct: 493 TCYARNVLNGRWYEFDDQFVTEVSPETVATCQ----AYVLFYQK 532
>gi|383864033|ref|XP_003707484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Megachile
rotundata]
Length = 915
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 194/470 (41%), Gaps = 110/470 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMM 62
GL G+ N GNTCY+N+ LQ LSN P L+ + SK + L + +N ++ M
Sbjct: 182 GLVGLQNIGNTCYMNAALQALSNVPPLTQFFLDCGHMVSYMSKDRKPGLSLSYLNLIRDM 241
Query: 63 W---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV-VPDQYN- 117
W + G +V IL +R+ F G Q D QEFL + L+EE K + D +
Sbjct: 242 WNRKTRGYVV--PHGILSGIRTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDS 299
Query: 118 -------GSTYSNTSSKQV---GSFRALHYWEKFQT--TEASVFSDIFVGQLRSSVRCSN 165
G S+ ++ GS ++ +E + +E S SD G+ + R S
Sbjct: 300 LLRLKGLGEQSSDEDETEIDGNGSSQSDAEYETCDSGVSEQSSLSD--EGERGTKRRYSR 357
Query: 166 CKRTSTVYEIFWELSLPV----PPGGGT-------------------------LYECQLR 196
++ + F S+ PP + +++ +L
Sbjct: 358 VSQSEKLRSKFTNRSIKKSTVDPPFSQSQRSTQNSPVKYRTKKQMKTRSIISDIFDGKLL 417
Query: 197 SSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------------------------ 226
SSV+C C R ST E F +LSLP+P
Sbjct: 418 SSVQCLTCDRISTRVETFQDLSLPIPSRDHIDMLHQGSLTPQKAGPCSDVVYVTNQSGWL 477
Query: 227 ----------------TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPV 266
+L++CL+ FF+ + L +C+ C K + +K ++ LP +
Sbjct: 478 SWFLQWMRSWFWGPVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEI 537
Query: 267 LILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKT 324
L + KRF F+ K+ + + FP EGLDM Y+ V YDL +V H G T
Sbjct: 538 LCVHLKRFRHELMFSSKIANYVSFPLEGLDMRPYLHKEC--VSKVTMYDLISVICHHG-T 594
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
A GHYT Y +W+ +DD V+ V +TV+ E AY+L Y++
Sbjct: 595 AGGGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCE----AYVLFYKK 640
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 173/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 173
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 174 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 231
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG S +S Q S L K AS V + IF G L++ V C C
Sbjct: 232 -LQGGFNG--ISRSSILQENS--TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 286
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ R N + T +L
Sbjct: 287 SRKFDPFLDLSLDIPS--------QFRNK-RSKNQENGPTC----------------SLR 321
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 322 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 381
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 382 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 439
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 440 HFNDSTVTLTDEDTVVKAK----AYILFYVER 467
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 174/389 (44%), Gaps = 63/389 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFY 508
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 174/389 (44%), Gaps = 63/389 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 195
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 196 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 253
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 254 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 308
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 309 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 343
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 344 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 403
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 404 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 461
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 462 HFNDSTVTLTDEETVVKAK----AYILFY 486
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 174/389 (44%), Gaps = 63/389 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 173
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 174 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 231
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 232 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 286
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 287 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 321
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 322 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 381
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 382 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 439
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 440 HFNDSTVTLTDEETVVKAK----AYILFY 464
>gi|391338083|ref|XP_003743391.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Metaseiulus occidentalis]
Length = 722
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 190/477 (39%), Gaps = 127/477 (26%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQGQLVDALVNFMKM- 61
GL G+ N GNTCY+N+ LQ LSN LN ++P+ ++ G+ + +++ KM
Sbjct: 105 GLAGLQNLGNTCYMNAALQALSNCTQLTEYFLNTPNLPL----RNNGRGANLAMSYSKMI 160
Query: 62 --MWSSGN-LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQ- 115
MW + + ++S F G QQDAQEFL L L++E K P +
Sbjct: 161 LQMWHEKRPPYVVPSGVAYGIKSVCPVFRGATQQDAQEFLRCFLDQLHDELKKEFFPKKE 220
Query: 116 -------------------------YNGSTYSN------------------TSSKQVGSF 132
Y+ +N +S K S
Sbjct: 221 QDEDEEGAEEHHRANEEEEDEDMASYDAEVAANSNNPDNNEDLYETCDSGLSSEKSEASE 280
Query: 133 RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 192
+ +T+ S+ + S+V + KR + Y +++
Sbjct: 281 KTADNHRSLETSLGSLLIGELQKVISSTVPGGDLKRPTPSYRSII----------SDVFD 330
Query: 193 CQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--------------------------- 225
++ SSV+C C+ S+ E+F +LSLP+P
Sbjct: 331 GRILSSVQCFTCETVSSTKEVFQDLSLPIPSRYHLNRLHHGPSYADLTASSTSLNSLASS 390
Query: 226 -----------GTLY-----------ECLNKFFNGETLHN----TCQYCKKQSDLVKLYE 259
G LY +CL FF+ + L +C C K + VK +
Sbjct: 391 QGQQGWMDWLLGWLYSWVWGPSVSLTDCLAAFFSADELKGDNMYSCGKCNKLRNGVKYSK 450
Query: 260 IQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAV 317
+ LP VL + KRF F+ K+++ ++FP EGLDM + R + TY+L AV
Sbjct: 451 LMELPEVLCIHLKRFRHELMFSTKISNYVQFPLEGLDMTPFTHPHAR--DKVTTYELTAV 508
Query: 318 SNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
H G TA GHY Y + G+WY YDD V+ VDA TV + E AY+L Y++
Sbjct: 509 ICHHG-TAGMGHYICYAMNDCDGQWYEYDDVYVTQVDASTVANCE----AYVLFYRK 560
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 174/389 (44%), Gaps = 63/389 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFY 508
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP L L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTVTDEETVGKAK----AYILFYVER 511
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 173
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 174 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 231
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 232 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 286
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 287 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPV----CSLR 321
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 322 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 381
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 382 TYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 439
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 440 HFNDSTVTLTDEDTVVKAK----AYILFYVER 467
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 174/389 (44%), Gaps = 63/389 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 195
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 196 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 253
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 254 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 308
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 309 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 343
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 344 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 403
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 404 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 461
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 462 HFNDSTVTLTDEETVVKAK----AYILFY 486
>gi|410967706|ref|XP_003990358.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Felis catus]
Length = 1042
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 137/287 (47%), Gaps = 53/287 (18%)
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ P G ++S + KQ +R SV SDIF G + SSV+C C R S
Sbjct: 558 LAPTHKKGRSFSYSEEKQHKKYR-------------SVISDIFDGTIISSVQCLTCDRVS 604
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSS------VRCSNCKRT-----------STVYEI 213
E F +LSLP+P G +L SS V+ +C V
Sbjct: 605 VTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKSW 661
Query: 214 FWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLIL 269
FW PV TL +CL FF + L +C+ CKK + VK ++Q+ P +L +
Sbjct: 662 FWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCI 714
Query: 270 WFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALY 327
KRF F+ K+++ + FP EGLD++ ++ A V+ TYDL +V H G TA
Sbjct: 715 HLKRFRHELMFSTKISTHVSFPLEGLDLQPFL-AKDSPVQI-VTYDLLSVICHHG-TASS 771
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHY AYCR WY +DD V+ V TV++AE AY+L Y++
Sbjct: 772 GHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----AYVLFYRK 814
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 291 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 348
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 349 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 396
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 173/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG S +S Q S L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNG--ISRSSILQENS--TLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ R N + T +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRNK-RSKNQENGPTC----------------SLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEDTVVKAK----AYILFYVER 511
>gi|219113607|ref|XP_002186387.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583237|gb|ACI65857.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 347
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 163/401 (40%), Gaps = 83/401 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVDA 54
PG G+ N GN+C++N+ +QCL++ L N + P+ S G + +
Sbjct: 1 PGSVGLHNLGNSCFLNATIQCLNHIEPLTQYFLQGKYLDELNRNNPL----GSGGNVAMS 56
Query: 55 LVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP- 113
+ +K MW L + + + S+ +FD Q D+QEF +L+ L+E+ V
Sbjct: 57 YASLLKKMWGGEYSTLVPRLLKQTVASFAPQFDNCYQHDSQEFGQFLMDGLHEDLNRVQT 116
Query: 114 ----DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
++ G + + A+ W K S+ D +C+
Sbjct: 117 KPYVEELEGLGMPDDQA-------AIESWRKHLLRHDSIIVD-------------HCQGM 156
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGG 225
RS + C C R S ++IF +S+P+
Sbjct: 157 H-------------------------RSHLTCPRCGRESIKFDIFSSISVPLACTKQKSA 191
Query: 226 GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---- 277
L +CL KF GE L C C++ +K+ + +P +LI+ KRF+ +
Sbjct: 192 IQLQDCLEKFMEGEQLDERNAWYCPKCRQHVCALKMIALWTIPDILIIHLKRFTFDTCMA 251
Query: 278 ----FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAY 333
KV ++FP EGLD+ YI ++ Y L VS H G TA GHYTA
Sbjct: 252 SGHMLRSKVDDKVEFPIEGLDLTKYILGP-VDPDAPPVYRLFGVSEHTGPTANSGHYTAT 310
Query: 334 CRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
R G+WY +D+ V +T A GAY+L YQR
Sbjct: 311 VRNSIDGQWYRCNDSHV----GRTSGEASITGGAYVLFYQR 347
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEDTVVKAK----AYILFYVER 511
>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
Length = 604
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 174/405 (42%), Gaps = 89/405 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNT----------PAFRNVLLNEDI--PIH------PDSKSQ 48
G+ N GNTC++N VLQ +N P + +E P H P +
Sbjct: 245 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIAFDESTGPPTHRGRIVTPGRAKE 304
Query: 49 GQLVDALV--NFMKMMWS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYL 101
+ DAL+ K++ S ++ + + LA+ +F G QQQDA EFL Y+
Sbjct: 305 MSMSDALLAEELRKVLLGLSLGGSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEFLTYM 364
Query: 102 LAALNEEA-KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSS 160
L L+ E +++P G KQ S+ + +F G L S
Sbjct: 365 LDRLHTELLQLLPRL--GHEPLGLRGKQ------------------SIVTAVFGGTLLSV 404
Query: 161 VRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLP 220
V C NC+ S +E F +LSL +P +L+ S RT E+
Sbjct: 405 VHCMNCRTDSKTHEPFQDLSLDIPD--------RLQRS-------RTKEQEEVC------ 443
Query: 221 VPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS- 275
+L L +FF E L ++ C C + K + I RLP VL L KRF
Sbjct: 444 ------SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW 497
Query: 276 -SNFTQKVTSPIKFPREGLDMEYYI--SASGRRV--ESRYTYDLCAVSNHIGKTALYGHY 330
+++ KV + + FP E LDM + +G R+ ++ + YDL AV H G A GHY
Sbjct: 498 CNSYRSKVDTQVDFPMESLDMSAFTVRGVTGTRLGAQNSHLYDLAAVIVHHGSGAGTGHY 557
Query: 331 TAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
TA+ + G+W+ ++D+ V P V A+ YIL Y RR
Sbjct: 558 TAFAVHD--GQWFHFNDSSVRPATTDAV----AKCKPYILFYVRR 596
>gi|428180637|gb|EKX49504.1| hypothetical protein GUITHDRAFT_47981, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 152/344 (44%), Gaps = 43/344 (12%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS--QGQLVDALVNFMKM 61
GL G+ N GNTC++N+ +QCL+ P FR+ L+ D+ S +G L + +
Sbjct: 1 GLVGLQNLGNTCFLNACIQCLAAVPPFRDFFLSNHHIFRLDTGSSMRGTLALSFGELLHK 60
Query: 62 MWSSGNLVLNTKAILLALR--SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP-DQYNG 118
+W G + A +L R + +F G +Q D+QEFL +LL L+E+ K D+
Sbjct: 61 IW-QGEPYSSVSAAILKDRVSKFAPQFTGCRQHDSQEFLRFLLDGLHEDLKTSDNDEMRQ 119
Query: 119 STYSNTSSKQVGSF--RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+ QV S ++ E + S + F GQL S + C C S Y+ F
Sbjct: 120 FMEVRMAHDQVASKYNESMPAMEMYCLDNLSCVTAAFGGQLVSQIECRTCSHQSRCYDPF 179
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
++SLP+P + RC L +C N F
Sbjct: 180 LDISLPIPSPSQFKEGQEQAHRPRCH-------------------------LTDCFNLFT 214
Query: 237 NGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPR 290
E L +C C +S K + LPP+L+L KRFS +K+ + ++FP+
Sbjct: 215 EKEVLEGENMYSCPNCNSRSCATKQLKFVSLPPILVLHIKRFSYTEVSREKLVTSLEFPK 274
Query: 291 EGLDMEYYI--SASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
GLD+ + + SG R E YDL +V+ H+G A GHY A
Sbjct: 275 AGLDLSPFAVETGSGER-EYPPIYDLKSVALHVGGMA-GGHYHA 316
>gi|449471572|ref|XP_002196987.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Taeniopygia guttata]
Length = 343
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 155/381 (40%), Gaps = 70/381 (18%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCL-SNTPAFRNVLLNE-DIPIHPDSKSQGQLVDALVNF 58
+ PGL G+ N NTCY+N+VLQCL S TP + L + + +H + G+ A
Sbjct: 19 LHPGLTGLQNLENTCYMNAVLQCLCSLTPLVQYFLSGKWNTDLH---QEIGESATAFGCL 75
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ MW ++ +A F Q DAQEFL+ +L L+E K V Q
Sbjct: 76 VSDMWLGKFDYVSPEAFHSVFGKRYPAFSRRTQHDAQEFLICVLDDLHEAFKEVRAQL-- 133
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
Q R S R+S+ I
Sbjct: 134 -------------------------------------QERQSPAAGASTRSSSGTSII-- 154
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFFN 237
L+E QL +RC CK S E F LSLP+P +L +CL FF
Sbjct: 155 ---------THLFEGQLSYGIRCLTCKTLSDRPESFTILSLPIPSTRVCSLQDCLECFFQ 205
Query: 238 GETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
+TL C C D I + P ++I KRF+ +K+++ + +P
Sbjct: 206 PDTLTWNNQIRCHRCGSNQDATVKASITKAPQIIIFHLKRFAWQDKHRRKLSTTVCYPFS 265
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
LD+ YIS S Y LCAV NH G YGHYTA+C+ T WY +DD V+
Sbjct: 266 HLDLSPYISTSCHNTTE---YSLCAVVNHAGDLD-YGHYTAFCKHSITKHWYSFDDDQVT 321
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ +SA AY+L Y
Sbjct: 322 KIP----DSAVQADTAYLLFY 338
>gi|189201425|ref|XP_001937049.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984148|gb|EDU49636.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1083
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 172/410 (41%), Gaps = 79/410 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N G TCY+NSV+QCLS ++ +++ ++ ++G L +A + +
Sbjct: 703 GLLNFGVTCYMNSVVQCLSGHLLLSDLFISQRYQRELQRENWKGTKGILPEAYATLLSNL 762
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
+ + + +++ ++QQDA+EFL ++L ++E+ + ++ +
Sbjct: 763 YKGDVTSVRPSTFRRICGHFNRQWGIDEQQDAKEFLEFVLDYMHEDMNLTWNKTPLKPLT 822
Query: 123 N----TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ T + + A+ W ++Q + SV +F GQ S + C C TST YE FW
Sbjct: 823 DQEELTRERYPRQYSAMIEWRRYQHRDMSVIGGMFAGQHASQLTCQTCGVTSTTYEAFWS 882
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+S+ +P G +C LR ECL +
Sbjct: 883 ISVEIPRQG----QCSLR---------------------------------ECLQSYCAP 905
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPRE 291
E L C CKK + VK I R P L++ FKRFS++ T+ KV P+ FP +
Sbjct: 906 ERLAGDELWRCPRCKKDREAVKKITITRAPDTLVIHFKRFSASRTESARKVRRPVDFPLQ 965
Query: 292 GLDM------------EYYISASGRR-------------VESRYTYDLCAVSNHIGKTAL 326
LDM E Y++ + R + + Y+ AV H G T
Sbjct: 966 RLDMSPFIEPPMTPEQEAYVAQTARDGPAQLAGVKSDPTMNGPFLYNAYAVIWHHGATLG 1025
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE--AEHGAYILVYQR 374
GHY A+ + + G W ++D + D + E AYI+ Y+R
Sbjct: 1026 SGHYVAFVKDKSRGCWRSFNDDKIYEFDPGNLPEHERLQNEKAYIVFYER 1075
>gi|195583324|ref|XP_002081472.1| GD11032 [Drosophila simulans]
gi|194193481|gb|EDX07057.1| GD11032 [Drosophila simulans]
Length = 1033
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 189/471 (40%), Gaps = 106/471 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQ-----GQLVDALVN 57
GL G+ N NTCY+NS LQ LSN P + +N D+ + +S G L +
Sbjct: 78 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKPGGLAKSYRR 137
Query: 58 FMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE----AK 110
M+ +W + + + IL +R+ F G QQ D QEFL + L+EE
Sbjct: 138 LMQDIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEELTEQVS 197
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWE------------KFQTTEASVF--------- 149
++P N Y +Q + E ++ T E+S+
Sbjct: 198 MLPHTQNQPQYPTLQQQQPSETDDENDDEAAPASLSPASESEYDTCESSMSERSAEVLLK 257
Query: 150 SDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL-----------PVPPGGGTL---YECQL 195
++ FV R++ S +V L P+ + ++ +L
Sbjct: 258 TEYFVTPCRTNGSNSGLPEGHSVQLQQPPLQHQQKNASSAEQKPIEAARSIISDVFDGKL 317
Query: 196 RSSVRCSNCKRTSTVYEIFWELSLPVP--------------------------------- 222
SSV+C C R ST E F +LSLP+P
Sbjct: 318 LSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAAETSARTNEGWL 377
Query: 223 ------------PGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPV 266
TLY+C+ FF+ + L +C+ C K +K + LP V
Sbjct: 378 SWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEV 437
Query: 267 LILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKT 324
L + KRF ++ ++ K++S + FP EG DM YI + + Y+L +V H G T
Sbjct: 438 LCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVA--IYNLSSVICHHG-T 494
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT + R G+WY +DD V+ V ++ V+S + AY+L Y +
Sbjct: 495 VGGGHYTCFARNALNGKWYEFDDQFVTEVSSEVVQSCQ----AYVLFYHKH 541
>gi|242003056|ref|XP_002422594.1| DNA double-strand break repair Rad50 ATPase, putative [Pediculus
humanus corporis]
gi|212505395|gb|EEB09856.1| DNA double-strand break repair Rad50 ATPase, putative [Pediculus
humanus corporis]
Length = 870
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 172/379 (45%), Gaps = 68/379 (17%)
Query: 5 LNGIAN--AGNTCYINSVLQCLSNTPAF-----RNVLLNEDIPIHPDSKSQGQLVDALVN 57
NG+ NTCY+NS++QC+SN PA N+ N+ +H +K++G++ + L
Sbjct: 537 FNGVKGNVVRNTCYLNSIVQCISNNPALVKYFCDNLYRND---LHKGNKTKGEVAEELAA 593
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+K +WS + + + + ++ +QQD+ EFL +L+ L+ + N
Sbjct: 594 LVKTLWSGQFRSIACRDFKNTVGMFKPEYATYEQQDSHEFLTFLMDWLH-------NDLN 646
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
ST+ + S+++ + +W+ F+ S+ S +F G +S+V
Sbjct: 647 KSTFGSMDSEKLDNDMEKAWWD-FKKKNISLISTLFYGLQKSTVS--------------- 690
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG-GTLYECLNKFF 236
C+ C S YE F LSL +P + +CL +
Sbjct: 691 -----------------------CTKCDEASVTYEPFSNLSLIIPDSEYSSTEQCLGLYL 727
Query: 237 NGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGL 293
E + C CK+ D K +I LPP+LI+ KRF ++K TS + FP L
Sbjct: 728 KSERISGWRCPKCKEFRDAEKKTDICILPPILIIHLKRFHYIEVLSRKRTSFVDFPLTDL 787
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+M Y+ +R YDL A+SNH G T GHYTAYC+ RWY +DD V +
Sbjct: 788 NMSQYVGCIKQR---HINYDLYAISNHYG-TMEGGHYTAYCKSPLYKRWYKFDDHEVFEI 843
Query: 354 DAQTVESAEAEHGAYILVY 372
+ V+S + AYIL Y
Sbjct: 844 SSNDVKS----NAAYILFY 858
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 177/406 (43%), Gaps = 91/406 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNT----------PAFRNVLLNE---DIPIH------PDSKS 47
G+ N GNTC++N VLQ +N P + +E + P H P
Sbjct: 191 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIAFDEASLEPPTHRGRIVTPGRAK 250
Query: 48 QGQLVDALV--NFMKMMWS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLY 100
+ + DAL+ K++ S ++ + + LA+ +F G QQQDA EFL Y
Sbjct: 251 EMSMSDALLAEELRKVLLGLSLGGSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEFLTY 310
Query: 101 LLAALNEEA-KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRS 159
+L L+ E +++P G KQ S+ + +F G L S
Sbjct: 311 MLDRLHTELLQLLPRL--GHEPPGLRGKQ------------------SIVTAVFGGTLLS 350
Query: 160 SVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSL 219
V C NC+ S +E F +LSL +P +L+ +RT E+
Sbjct: 351 VVHCMNCRTDSKTHEPFQDLSLDIPD--------RLQ--------RRTKEQEEVC----- 389
Query: 220 PVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS 275
+L L +FF E L ++ C C + K + I RLP VL L KRF
Sbjct: 390 -------SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFR 442
Query: 276 --SNFTQKVTSPIKFPREGLDMEYYI--SASGRRV--ESRYTYDLCAVSNHIGKTALYGH 329
+++ KV + + FP E LDM + +G R+ ++ + YDL AV H G A GH
Sbjct: 443 WCNSYRSKVDTQVDFPMESLDMSAFTVRGMTGTRLGAQNSHLYDLAAVIVHHGSGAGTGH 502
Query: 330 YTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
YTA+ + G+W+ ++D+ V P ++V A+ YIL Y R+
Sbjct: 503 YTAFAVHD--GQWFHFNDSSVRPASTESV----AKCKPYILFYVRK 542
>gi|195334288|ref|XP_002033815.1| GM21521 [Drosophila sechellia]
gi|194125785|gb|EDW47828.1| GM21521 [Drosophila sechellia]
Length = 979
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 188/470 (40%), Gaps = 106/470 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQ-----GQLVDALVN 57
GL G+ N NTCY+NS LQ LSN P + +N D+ + +S G L +
Sbjct: 78 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKPGGLAKSYRR 137
Query: 58 FMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE----AK 110
M+ +W + + + IL +R+ F G QQ D QEFL + L+EE
Sbjct: 138 LMQDIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEELTEQVS 197
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWE------------KFQTTEASVFSDIFVGQLR 158
++P N Y +Q + E ++ T E+S+ L+
Sbjct: 198 MMPHTQNQPQYPTLQQQQPSETDDENDDEAAPASLSPASESEYDTCESSMSERSAEVLLK 257
Query: 159 SSVRCSNCKRTSTVYEI--FWELSLPVPPGG---------------------GTLYECQL 195
+ + C+ + + + L PP +++ +L
Sbjct: 258 TEYFVTPCRTNGSNSGLPEGHSVQLQQPPMQHQQKNSSSAEQKPIEAARSIISDVFDGKL 317
Query: 196 RSSVRCSNCKRTSTVYEIFWELSLPVP--------------------------------- 222
SSV+C C R ST E F +LSLP+P
Sbjct: 318 LSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAAETSARTNEGWL 377
Query: 223 ------------PGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPV 266
TLY+C+ FF+ + L +C+ C K +K + LP V
Sbjct: 378 SWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEV 437
Query: 267 LILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKT 324
L + KRF ++ ++ K++S + FP EG DM YI + + Y+L +V H G T
Sbjct: 438 LCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVA--IYNLSSVICHHG-T 494
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT + R G+WY +DD V+ V ++ V+S + AY+L Y +
Sbjct: 495 VGGGHYTCFARNALNGKWYEFDDQFVTEVSSEVVQSCQ----AYVLFYHK 540
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 176/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 351 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 408
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E +
Sbjct: 409 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ 468
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+NG + S + +L K AS V + IF G L++ V C C
Sbjct: 469 ---GGFNGVSRSVILQEN----SSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 521
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + P+ +L
Sbjct: 522 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPL----CSLR 556
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 557 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 616
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 617 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 674
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 675 HFNDSTVTLTDEETVVKAK----AYILFYVER 702
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 176/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + +L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSVILQEN----SSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + P+ +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPL----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFYVER 511
>gi|302794831|ref|XP_002979179.1| hypothetical protein SELMODRAFT_2719 [Selaginella moellendorffii]
gi|300152947|gb|EFJ19587.1| hypothetical protein SELMODRAFT_2719 [Selaginella moellendorffii]
Length = 350
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 167/390 (42%), Gaps = 62/390 (15%)
Query: 5 LNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQG--------------Q 50
L G+ N GNTC++NS LQCL++T + +L P +++G
Sbjct: 1 LVGLMNEGNTCFLNSCLQCLAHTVPLSSAILG---PFSELIQTKGAAARSRRDTASLSEM 57
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA 109
L + +K + + + ++LL +L+ + +F GN+Q DAQE + ++ L+E
Sbjct: 58 LAYSFRQLLKDLCGKPSYSTASASMLLQSLQGLSPQFAGNRQHDAQEAMRTIIDGLHEAL 117
Query: 110 KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
P + A WE + S+ GQL+S++ CS C R
Sbjct: 118 NRKPP--GRPKCPEPPPTTPEAEIADICWEHHKMWNNSLTISCLTGQLQSAIECSVCHRK 175
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSLP+ GG+ + R R+ E
Sbjct: 176 SHCFDPFLDLSLPLSKSGGS-------DNFRTFGSSRSRMTIE----------------- 211
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF---SSNFTQKV 282
+CL+ F ETL + C CK K I R P VL+L KRF +K
Sbjct: 212 DCLSAFVAPETLDPSNKYYCSGCKAPQISTKKLSIYRAPSVLVLHIKRFYGVEPRSYRKD 271
Query: 283 TSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
P+ +P GLD+ ++ + + TYDL V +H G YGHYTA CR G W
Sbjct: 272 DRPVVYPLNGLDLSSFMR---HLSQQQATYDLYGVCSHFGSLG-YGHYTATCRSVDNG-W 326
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
Y Y+D+ V+ V V+S+ AYIL Y
Sbjct: 327 YCYNDSSVTSVQ-DPVDSS-----AYILFY 350
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSPSNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEDTVVKAK----AYILFYVER 511
>gi|431897014|gb|ELK06278.1| Ubiquitin carboxyl-terminal hydrolase 33 [Pteropus alecto]
Length = 931
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 470 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 526
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW PV TL +CL FF + L +C
Sbjct: 527 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PVV----TLQDCLAAFFARDELKGDNMYSC 579
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 580 EKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 639
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 640 PA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNHWYEFDDQSVTEVSESTVQNAE- 695
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 696 ---AYVLFYRK 703
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ + D K + + + M +W
Sbjct: 182 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLVRTDKKP--AICKSYLKLMTELW 239
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V ++ +++ F G QQDAQEFL L+ L+EE K
Sbjct: 240 HKSRPGSVV--PTSLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 287
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 175/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSPTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGVLQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTA+ E GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAFATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEETVLKAK----AYILFYVER 511
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 173/389 (44%), Gaps = 63/389 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 173
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 174 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 231
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 232 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 286
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 287 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 321
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 322 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 381
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHY AY E GRW+
Sbjct: 382 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYIAYATHE--GRWF 439
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
++D+ V+ D +TV A+ AYIL Y
Sbjct: 440 HFNDSTVTLTDEETVVKAK----AYILFY 464
>gi|300797726|ref|NP_001178023.1| ubiquitin carboxyl-terminal hydrolase 33 [Rattus norvegicus]
Length = 897
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 33/247 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 KRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCK 249
V FW PV TL +CL FF + L +C+ CK
Sbjct: 501 GEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCK 553
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVE 307
K + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 554 KLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS--PA 611
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE A
Sbjct: 612 QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----A 666
Query: 368 YILVYQR 374
Y+L Y++
Sbjct: 667 YVLFYRK 673
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 208
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 256
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G +QQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYRQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSANNKCCINGASTVVTTIFGGILQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q RS KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP L L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 TYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVFVHHGSGVGSGHYTAYAVHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D +TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTVTDEETVGKAK----AYILFYVER 511
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 89 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 146
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 147 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 204
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 205 -LQGGFNGVSCSPILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 259
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 260 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPVC----SLR 294
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 295 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 354
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
+ ++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 355 TYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 412
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ + TV A+ AYIL Y R
Sbjct: 413 HFNDSTVTLTEEDTVVKAK----AYILFYAER 440
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 33/247 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLARLHSSSHPTIVKAGSC 501
Query: 205 KRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCK 249
V FW PV TL +CL FF + L +C+ CK
Sbjct: 502 GEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCK 554
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVE 307
K + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 555 KLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS--PA 612
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE A
Sbjct: 613 QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----A 667
Query: 368 YILVYQR 374
Y+L Y++
Sbjct: 668 YVLFYRK 674
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|332809270|ref|XP_003308214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
troglodytes]
Length = 828
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW PV TL +CL FF + L +C
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSC 582
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 583 EKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 642
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 643 --PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 698
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 699 ---AYVLFYRK 706
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|323449693|gb|EGB05579.1| hypothetical protein AURANDRAFT_38431 [Aureococcus anophagefferens]
Length = 812
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 128/285 (44%), Gaps = 27/285 (9%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK----SQGQLVDALVNF 58
PG G+ N GNTC++NS LQCLS+TP R +L+E + SQG++VD N
Sbjct: 83 PGATGLVNLGNTCFMNSALQCLSHTPLLRAYVLSEQFAAEINRANPLGSQGRMVDEFANV 142
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQYN 117
++M+WS + AL +F GN QQD+QEFL +L L+E+ +VV Y
Sbjct: 143 LRMLWSDRYRSVAPSKFKRALARAKPQFAGNDQQDSQEFLNEMLDVLHEDVNRVVEKPYV 202
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ +K A W+++ SV D+F GQL+S +C C + S +E F
Sbjct: 203 EEPDDDDVAKLTYEVAARDAWDRYLLRNRSVIVDLFQGQLKSEKQCCACGKKSVKFEPFM 262
Query: 178 ELSLPVP---------------PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELS--LP 220
LS+P+P PG E QLR+++ + R V ++ LS
Sbjct: 263 HLSVPLPSTQEKRLKHAASKKRPG-----EKQLRAAIFGVSVPRLGEVGDLKSALSEVTG 317
Query: 221 VPPGGGTLYECLNKFFNGETLHNTCQYCKKQSDLVKLYEIQRLPP 265
VP + + F + + D+V YE PP
Sbjct: 318 VPRADIAVGDVYRHRFARILEDDEPLAAVRDDDVVVAYEKSEAPP 362
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 13/160 (8%)
Query: 224 GGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSN 277
GG L CL+ F ETL C CK+ E +LP +L++ KRF S+
Sbjct: 641 GGIPLSHCLDAFSKEETLSEADAWICPQCKEPRSATSKIEPWKLPDILVIHVKRFLCSAK 700
Query: 278 FTQKVTSPIKFPREGLDMEYYISASGRRVE-SRYTYDLCAVSNHIGKTALYGHYTAYCRR 336
+ +K+ + + FP LDM ++ R ++ TYDL AV+NH+G GHYT+Y R
Sbjct: 701 WREKIRTKVLFPLSALDMAPWVHEEARSLQRGAMTYDLFAVTNHLGGMT-GGHYTSYVRA 759
Query: 337 EGTG-RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+G RW DD VV ++V + AY+L Y+RR
Sbjct: 760 DGGDYRWLHVDDDVVEEAGPKSVVT----DAAYVLFYRRR 795
>gi|449303688|gb|EMC99695.1| hypothetical protein BAUCODRAFT_45097, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1006
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 160/413 (38%), Gaps = 82/413 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK----SQGQLVDALVNFMKMM 62
G+ N NTCY+NS +Q LS T + L++ ++ S G + + N ++ +
Sbjct: 631 GLVNFRNTCYMNSTIQALSATTPLSVLFLDDGFRSQVQAENWKGSHGHMTNIYANLIRNL 690
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----VPDQYNG 118
W V+ +R +FD +QQDA+EF ++ L+E+ V P Q
Sbjct: 691 WKGDVEVVKPSTFRSLVRRLASQFDNEEQQDAKEFFDVVIDTLHEDLNVNWARTPLQALT 750
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + + W ++ E S ++F GQ S +
Sbjct: 751 EQEEAKRERMPKVYASKIEWSRYNHRELSFIYNLFAGQHASKLT---------------- 794
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--------GTLYE 230
C C TST YE F +S+ +P TL +
Sbjct: 795 ----------------------CLECNFTSTTYEAFTSISVEIPLDARFWRNGRYPTLDD 832
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTS 284
CL + + E L C CK + K + R P L++ FKRF+S Q K+
Sbjct: 833 CLRSYCSEEMLTRDDQWRCPRCKTFREAKKRLTLTRAPQFLVVHFKRFASQGRQSRKIRI 892
Query: 285 PIKFPREGLDMEYYI--------------------SASGRRVESRYTYDLCAVSNHIGKT 324
P+ FP ++ Y+ +G + YTYD AV HIG T
Sbjct: 893 PVDFPLNDFSLDPYMLPQLTPEDARKVADLYGEDAPKTGPEMTPPYTYDAYAVVRHIGAT 952
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
GHY + +G W+++DD+ V+ + + A+A AYI+ YQRR
Sbjct: 953 MQSGHYITAAKDQGRRCWHMFDDSRVNDFQPEQLRGADALQNEQAYIVFYQRR 1005
>gi|432911380|ref|XP_004078651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Oryzias
latipes]
Length = 911
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 135/279 (48%), Gaps = 53/279 (18%)
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+T+S T SK+ +R S+ SD+F G + SSV+C C R S E F +
Sbjct: 435 TTFSPTKSKRQKKYR-------------SIISDVFDGTIVSSVQCLTCDRVSVTLENFQD 481
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEI-----------------FWELSLPV 221
+SLP+P G +L SS ++ + + E FW PV
Sbjct: 482 ISLPIP---GKEDLAKLHSSTHQTSLVKAGSCGEAYAAQGWIAFVMEYIKSWFWG---PV 535
Query: 222 PPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN 277
TL +CL FF + L +C+ CKK + VK ++Q+LP +L + KRF
Sbjct: 536 V----TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKMQKLPEILCIHLKRFRHE 591
Query: 278 --FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCR 335
F+ K+++ + FP EGLD++ ++S + YDL +V H G TA GHY AYCR
Sbjct: 592 LMFSTKISTHVSFPLEGLDLQPFLSKDSSAQTT--NYDLLSVICHHG-TASSGHYIAYCR 648
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ WY +DD V+ V V++AE AY+L Y++
Sbjct: 649 NDSNNLWYEFDDQSVTEVSESCVQNAE----AYVLFYKK 683
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL+G+ N GNTCY+N+ LQ LSN P L + D K L + + +W
Sbjct: 154 GLSGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKP--ALCKSYQKLVSDLW 211
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T + +++ F G QQD+QEFL L+ L+EE K
Sbjct: 212 HKNRPSYVVPT-TLFQGIKAINPMFRGYSQQDSQEFLRCLMDQLHEELK 259
>gi|302813726|ref|XP_002988548.1| hypothetical protein SELMODRAFT_2558 [Selaginella moellendorffii]
gi|300143655|gb|EFJ10344.1| hypothetical protein SELMODRAFT_2558 [Selaginella moellendorffii]
Length = 350
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 167/390 (42%), Gaps = 62/390 (15%)
Query: 5 LNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQG--------------Q 50
L G+ N GNTC++NS LQCL++T + +L P +++G
Sbjct: 1 LVGLMNEGNTCFLNSCLQCLAHTVPLSSAILG---PFSELIQTKGAAARSRRDTASLSEM 57
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA 109
L + +K + + + ++LL +L+ + +F GN+Q DAQE + ++ L+E
Sbjct: 58 LAYSFRQLLKDLCGKPSYSTASASMLLQSLQGLSPQFAGNRQHDAQEAMRTIIDGLHEAL 117
Query: 110 KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
P + A WE + S+ GQL+S++ CS C R
Sbjct: 118 NRKPP--GRPKCPEPPPTTPEAEIADICWEHHKMWNNSLTISCLTGQLQSTIECSVCHRK 175
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSLP+ GG+ + R R+ E
Sbjct: 176 SHCFDPFLDLSLPLSKSGGS-------DNFRNFGSSRSRMTIE----------------- 211
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF---SSNFTQKV 282
+CL+ F ETL + C CK K I R P VL+L KRF +K
Sbjct: 212 DCLSAFVAPETLDPSNKYYCSGCKAPQISTKKLSIYRAPSVLVLHIKRFYGVEPRSYRKD 271
Query: 283 TSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
P+ +P GLD+ ++ + + TYDL V +H G YGHYTA CR G W
Sbjct: 272 DRPVVYPLNGLDLSSFMR---HFSQQQATYDLYGVCSHFGSLG-YGHYTATCRSVDNG-W 326
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
Y Y+D+ V+ V V+S+ AYIL Y
Sbjct: 327 YCYNDSSVTSVQ-DPVDSS-----AYILFY 350
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 173/392 (44%), Gaps = 63/392 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF+ YLL L+ E
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
+ +NG + S + L K AS V + IF G L++ V C C
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGFLQNEVNCLICGTE 330
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Q R+ KR+ + + PV +L
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRN-------KRSKN------QENGPV----CSLR 365
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ KV
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425
Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
++FP GLDM+ Y+ YDL AV H G GHYTAY E GRW+
Sbjct: 426 IYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483
Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
++D+ V+ D TV A+ AYIL Y R
Sbjct: 484 HFNDSTVTLTDEDTVVKAK----AYILFYVER 511
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 33/247 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 KRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCK 249
V FW PV TL +CL FF + L +C+ CK
Sbjct: 501 GEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCK 553
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVE 307
K + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 554 KLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA-- 611
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE A
Sbjct: 612 QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----A 666
Query: 368 YILVYQR 374
Y+L Y++
Sbjct: 667 YVLFYRK 673
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 33/247 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 KRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCK 249
V FW PV TL +CL FF + L +C+ CK
Sbjct: 501 GEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCK 553
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVE 307
K + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 554 KLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA-- 611
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE A
Sbjct: 612 QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----A 666
Query: 368 YILVYQR 374
Y+L Y++
Sbjct: 667 YVLFYRK 673
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|291398653|ref|XP_002715595.1| PREDICTED: ubiquitin specific protease 33 [Oryctolagus cuniculus]
Length = 873
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 416 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 472
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW PV TL +CL FF + L +C
Sbjct: 473 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSC 525
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 526 EKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 585
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 586 PT--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 641
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 642 ---AYVLFYRK 649
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 126 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 183
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 184 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 231
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 33/247 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 KRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCK 249
V FW PV TL +CL FF + L +C+ CK
Sbjct: 501 GEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCK 553
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVE 307
K + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 554 KLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA-- 611
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE A
Sbjct: 612 QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----A 666
Query: 368 YILVYQR 374
Y+L Y++
Sbjct: 667 YVLFYRK 673
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 33/247 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 KRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCK 249
V FW PV TL +CL FF + L +C+ CK
Sbjct: 501 GEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCK 553
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVE 307
K + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 554 KLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA-- 611
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE A
Sbjct: 612 QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----A 666
Query: 368 YILVYQR 374
Y+L Y++
Sbjct: 667 YVLFYRK 673
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 124/250 (49%), Gaps = 39/250 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS-----VRC 201
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 496 SVISDIFDGTVISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTIVKA 552
Query: 202 SNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQ 246
+C V FW PV TL +CL FF + L +C+
Sbjct: 553 GSCGEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCE 605
Query: 247 YCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGR 304
CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 606 KCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS- 664
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 665 -PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE-- 720
Query: 365 HGAYILVYQR 374
AY+L Y++
Sbjct: 721 --AYVLFYRK 728
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 207 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 264
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 265 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 312
>gi|115640606|ref|XP_784858.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8
[Strongylocentrotus purpuratus]
Length = 1187
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 156/361 (43%), Gaps = 61/361 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI-----PIHPDSKSQGQLVDALVNF 58
L G+ N GNTC++NSV+QCLSNT + +D +P + G++ +
Sbjct: 848 ALTGLRNLGNTCFMNSVVQCLSNTTPLAKYFITDDYLQDINRANPLGRG-GEVAEEFAVV 906
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGN--QQQDAQEFLLYLLAALNEEAKVVPDQY 116
++ WS + + + + Y +F + D+QEFLL+LL L+E+ V +
Sbjct: 907 VRANWSGQYRSIAPRDLRDTVTKYVPEFRKHVGHHHDSQEFLLFLLDGLHEDLNEVKKR- 965
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
+ + K+ EA+ S +L S+ S
Sbjct: 966 --------------QYIKEEDFSKYPDHEAAGLSWRNHEKLNRSIIVS------------ 999
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKF 235
L++ Q +S+VRC +C S +E F LSLP+ +L+ECL +F
Sbjct: 1000 -------------LFQGQFKSTVRCLSCNNKSVKFEAFMYLSLPIASKSKCSLHECLQQF 1046
Query: 236 FNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFP 289
E L C +CK K I +LP +L++ KRF + QK+ + + FP
Sbjct: 1047 SKPEELTGDNATHCTHCKGNRKSEKTILIWKLPHILLIHLKRFYYEGMWRQKLQTNVDFP 1106
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
+ L M+ Y+ +R Y L VSNH G T GHYTA CR RWY YDD
Sbjct: 1107 ND-LTMDRYVIGPAQR----NIYQLYGVSNHSG-TLDGGHYTACCRNAVNKRWYKYDDHE 1160
Query: 350 V 350
V
Sbjct: 1161 V 1161
>gi|417413151|gb|JAA52921.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 927
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 466 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 522
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW P+ TL +CL FF + L +C
Sbjct: 523 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PI----VTLQDCLAAFFARDELKGDNMYSC 575
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 576 EKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 635
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 636 --PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 691
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 692 ---AYVLFYRK 699
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ + D K + + + M +W
Sbjct: 174 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLVRTDKKP--AICKSYLKLMTELW 231
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 232 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 279
>gi|296208309|ref|XP_002751018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Callithrix
jacchus]
Length = 1035
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 574 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 630
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW P+ TL +CL FF + L +C
Sbjct: 631 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PI----VTLQDCLAAFFARDELKGDNMYSC 683
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 684 EKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 743
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 744 --PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 799
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 800 ---AYVLFYRK 807
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 284 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 341
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 342 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 389
>gi|149026258|gb|EDL82501.1| rCG28827, isoform CRA_b [Rattus norvegicus]
Length = 672
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 121/246 (49%), Gaps = 33/246 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 KRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCK 249
V FW PV TL +CL FF + L +C+ CK
Sbjct: 501 GEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCEKCK 553
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVE 307
K + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 554 KLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA-- 611
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE A
Sbjct: 612 QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE----A 666
Query: 368 YILVYQ 373
Y+L Y+
Sbjct: 667 YVLFYR 672
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 208
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 256
>gi|401837724|gb|EJT41616.1| DOA4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 926
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 160/399 (40%), Gaps = 70/399 (17%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 63 W-----SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ +S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 623 YKEQVDASKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKICGHTSTTY 742
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P VP T+ +C
Sbjct: 743 QPFTVLSIPIPRK----------------------------------VPQNEITIEDCFK 768
Query: 234 KFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP 289
+F E L C +CKK+ K + RLP LI+ KRF N K +K+P
Sbjct: 769 EFTKCENLEVDEQWLCPHCKKRQPSTKQLTVTRLPRNLIIHLKRF-DNLLNKNNDFVKYP 827
Query: 290 ---------REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCR 335
D + + + R + Y+L V+ H G T GHYTAY +
Sbjct: 828 FLLDLTPFWANDFDGVFPPGVNDDELPVRGQIPPFKYELYGVACHFG-TLYGGHYTAYVK 886
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ W +DDT PV +T AY+L Y R
Sbjct: 887 KGLRKGWLYFDDTKFKPVKNKT---DVTNSNAYVLFYHR 922
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 124/250 (49%), Gaps = 39/250 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS-----VRC 201
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 494 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIP---GKEDLAKLHSSSHPTIVKA 550
Query: 202 SNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQ 246
+C V FW PV TL +CL FF + L +C+
Sbjct: 551 GSCGEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCE 603
Query: 247 YCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGR 304
CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 604 KCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS- 662
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 663 -PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE-- 718
Query: 365 HGAYILVYQR 374
AY+L Y++
Sbjct: 719 --AYVLFYRK 726
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 205 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 262
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 263 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 310
>gi|170032730|ref|XP_001844233.1| ubiquitin specific protease [Culex quinquefasciatus]
gi|167873063|gb|EDS36446.1| ubiquitin specific protease [Culex quinquefasciatus]
Length = 862
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 160/375 (42%), Gaps = 91/375 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNT R L ++ +K+QG++V+ + +K
Sbjct: 558 GLTGLKNLGNTCYMNSILQCLSNTAFLREHFLEGTFRQNLNRSNKTQGRIVEEVAAVIKA 617
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + +K + + Y ++F G +QQD+ EFL L+ L+ + + VP Q S
Sbjct: 618 LWLGQYKCIASKNLRYVVGQYERQFGGIEQQDSHEFLTILMDWLHSDIQTVPIQQYSSLE 677
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
++S++ W + S S++F GQ++S+
Sbjct: 678 DLSASEKA--------WIDYLKGMESYVSNLFYGQIKST--------------------- 708
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V+C C + S YE F LSL +P + ++ F+
Sbjct: 709 -----------------VKCVRCGKESATYESFSNLSLELPQNANRCHLNVSGFYADPEA 751
Query: 242 HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISA 301
T Y KKQ N+ +KFP + LDM +I+
Sbjct: 752 VATV-YKKKQ-------------------------NY-------VKFPLQELDMTTHIAP 778
Query: 302 S----GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
S + + +R Y L VSNH G + GHYTA+C+ +WY +DD V+ +D
Sbjct: 779 SELSRNKTLRAR-RYHLFGVSNHYG-SMESGHYTAFCKNTVHQKWYKFDDHTVTSLDTSD 836
Query: 358 VESAEAEHGAYILVY 372
V S+ YIL Y
Sbjct: 837 VCSS----AGYILFY 847
>gi|395822081|ref|XP_003784352.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Otolemur
garnettii]
Length = 1125
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 664 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 720
Query: 201 CSNCKRTST-----------VYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW PV TL +CL FF + L +C
Sbjct: 721 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PVV----TLQDCLAAFFARDELKGDNMYSC 773
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 774 EKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 833
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 834 --PTQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTQVSESTVQNAE- 889
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 890 ---AYVLFYRK 897
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 374 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 431
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 432 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 479
>gi|301773886|ref|XP_002922367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Ailuropoda melanoleuca]
Length = 932
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 126/251 (50%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 471 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 527
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW P+ TL +CL FF + L +C
Sbjct: 528 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PI----VTLQDCLAAFFARDELKGDNMYSC 580
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++ A
Sbjct: 581 EKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL-AKD 639
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
V+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 640 SPVQI-VTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 696
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 697 ---AYVLFYRK 704
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 180 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 237
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 238 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 285
>gi|332222240|ref|XP_003260275.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Nomascus leucogenys]
Length = 942
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 582
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 583 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 642
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 643 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 699
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 700 STVQNAE----AYVLFYRK 714
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQD QEFL + L+E+ K
Sbjct: 241 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDGQEFLRCFMDDLHEDXK 288
>gi|42516561|ref|NP_963920.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Homo sapiens]
gi|16741735|gb|AAH16663.1| Ubiquitin specific peptidase 33 [Homo sapiens]
gi|119626773|gb|EAX06368.1| ubiquitin specific peptidase 33, isoform CRA_b [Homo sapiens]
gi|123981168|gb|ABM82413.1| ubiquitin specific peptidase 33 [synthetic construct]
gi|123995993|gb|ABM85598.1| ubiquitin specific peptidase 33 [synthetic construct]
Length = 828
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW PV TL +CL FF + L +C
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSC 582
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD++ +++
Sbjct: 583 EKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 642
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 643 --PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 698
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 699 ---AYVLFYRK 706
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|55731067|emb|CAH92249.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 497
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 498 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 550
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 551 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 610
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 611 QPFLAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 667
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 668 STVQNAE----AYVLFYRK 682
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|145524988|ref|XP_001448316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415860|emb|CAK80919.1| unnamed protein product [Paramecium tetraurelia]
Length = 482
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 175/395 (44%), Gaps = 70/395 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY N+ + C+S+T + L++ ++ + G + A V+ M+ +W
Sbjct: 62 GVVGLKNLGNTCYFNTAIHCISHTQPLVDYFLSKAYKVNSSCPTSGNITKAFVSLMEQIW 121
Query: 64 SSGNLVLNTK---------------------AILLALRSYTKKFDGNQQQDAQEFLLYLL 102
N +K +L L+ Y+K+F Q+D QE L YLL
Sbjct: 122 DDENCFAESKDFKQLVQGQKLKPYNKCINPIKLLNLLQKYSKRFALGDQEDCQELLSYLL 181
Query: 103 AALNEEA-KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSV 161
L++E + P+ + S + + + V A W + S+ D+F GQL+S+
Sbjct: 182 DLLHQELNRSQPN--SKSITKDYTGEYVDPKWAADSWGEHLKINRSIIVDLFQGQLKSTC 239
Query: 162 RCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPV 221
+C C S +E F L+LP+P ++Y+C ++F E P
Sbjct: 240 QCQECGFQSHKFEPFLFLNLPIPKQKVSIYKC-----------------LDLFQE---PE 279
Query: 222 PPGGGTLYECLNKFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ- 280
G ++C N CK D K ++ +LP LI+ KRF + +
Sbjct: 280 LLSGSCQWKCPN--------------CKINRDFKKQIQLWKLPNQLIIHLKRFEFHHRKQ 325
Query: 281 -KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
K+ + ++FP E LDM Y ++ Y L AV+ H G ++ GHY A C+ +
Sbjct: 326 VKLNTVVEFPLE-LDMAQYCVD-----QAISCYQLYAVAQHDG-SSYGGHYVALCKAQNN 378
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
WY+Y+D V + Q V+ AY+L YQR
Sbjct: 379 N-WYMYNDDQVFRI--QDVKKMVQNEYAYMLFYQR 410
>gi|390355680|ref|XP_786312.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Strongylocentrotus purpuratus]
Length = 538
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 171/405 (42%), Gaps = 62/405 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ + LV + + +
Sbjct: 158 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDKHHCENERSRDNCLVCEMTRVFQEFY 217
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S V +L + ++ + G +QQDA EF + L L+ K +NG++ +N
Sbjct: 218 SGIRSVHIPYRLLHLVWTHARHLAGYEQQDAHEFFIAALDVLHRHCK----GHNGASGNN 273
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C CK ST + FW++SL +
Sbjct: 274 PNHCNC------------------IIDQIFTGGLQSDVTCQACKGISTTVDPFWDISLDL 315
Query: 184 PPGGGT---------LYECQLRSSVRCSNCKRTSTVYEIFW--ELSLPVPPG----GGTL 228
P + + L SN +ST + L PPG +L
Sbjct: 316 GPSSSSNSAPLPVPIIVPTPLPDFSLDSNSSGSSTSSSSLHNGDSGLMSPPGFDDVPHSL 375
Query: 229 YECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKV 282
+CL +F E L ++ C C+ + K ++ LP V KRF SS F +K+
Sbjct: 376 DDCLRRFTRPEYLGSSAKIKCSVCQNYQESTKQLTMKTLPLVACFHLKRFEHSSRFRKKI 435
Query: 283 TSPIKFPREGLDMEYYISA------------SGRRVESRYTYDLCAVSNHIGKTALYGHY 330
++ I FP E LDM Y+S S R S Y L AV NH G GHY
Sbjct: 436 STFISFPHE-LDMTPYMSTHRRANGLSHHPRSNRTTTSDNQYSLFAVVNHHGSLEA-GHY 493
Query: 331 TAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
T Y R+ +W+ DD +++ V +E Y+L Y +R
Sbjct: 494 TCYVRQH-QDQWFKCDDALITKASVHDVLQSE----GYLLFYHKR 533
>gi|410301274|gb|JAA29237.1| ubiquitin specific peptidase 33 [Pan troglodytes]
Length = 942
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 530 AGSCGEAYAPQGWIAFFMGYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 582
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 583 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 642
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 643 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 699
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 700 STVQNAE----AYVLFYRK 714
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|403258399|ref|XP_003921756.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Saimiri boliviensis boliviensis]
Length = 1020
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 574 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 630
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 631 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 683
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 684 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 743
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 744 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 800
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 801 STVQNAE----AYVLFYRK 815
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 284 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 341
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 342 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 389
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 41/255 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
KR S V FW PV TL +CL FF + L
Sbjct: 501 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 553
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 554 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 613
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV+
Sbjct: 614 AKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 360 SAEAEHGAYILVYQR 374
+AE AY+L Y++
Sbjct: 671 NAE----AYVLFYRK 681
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|452989642|gb|EME89397.1| hypothetical protein MYCFIDRAFT_55813 [Pseudocercospora fijiensis
CIRAD86]
Length = 1079
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 168/415 (40%), Gaps = 91/415 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDS--KSQGQLVDALVNFMKMM 62
GI N GNTCY+N+ LQ LS T ++L++ + D+ S+G L + N ++ +
Sbjct: 700 GIQNFGNTCYMNATLQALSATTPLTILVLDDGYKKLVQKDNWKGSRGLLPEIYANTVRSL 759
Query: 63 WSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
W + + T + R + D NQQQDAQEF +++ L+E+ +NG
Sbjct: 760 WEGKYDYIKPTTLLGFCARLNSTFKDPNQQQDAQEFFSFIVDCLHED-------FNGQWA 812
Query: 122 SN-----TSSKQVGSFR------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
T ++ R A W ++ E S + +F GQ S ++
Sbjct: 813 KQPLRMLTEQEEAKRERMPRLVVAKTEWGRYIHRENSFLTSLFYGQHSSKLK-------- 864
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT-LY 229
C C TST YE + L + +P L
Sbjct: 865 ------------------------------CPKCSFTSTTYEAWALLQVEIPDTREIRLQ 894
Query: 230 ECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF---TQKV 282
ECL + F E L + TC CK K + R PP L++ KRF N +K+
Sbjct: 895 ECLRQHFKDELLDDENQWTCPSCKVPRRATKKLTMTRAPPFLVVALKRFKQNARGDQRKI 954
Query: 283 TSPIKFPREGLDMEYYISASGRRVES--------------------RYTYDLCAVSNHIG 322
+ ++FP +GLDME ++ E+ Y YD AV H+G
Sbjct: 955 HTAVRFPLQGLDMEEFVLPPPSPQEAVDIATHHGADALKTDVTLTPPYIYDAYAVVRHLG 1014
Query: 323 KTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
T GHYT + + G W ++DT S + V + +A AY++ YQRR
Sbjct: 1015 DTTKSGHYTCAVKDKARGCWRYFNDTRHSDFHPENVSAGQALDNDQAYLVFYQRR 1069
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 41/255 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
KR S V FW PV TL +CL FF + L
Sbjct: 501 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 553
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 554 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 613
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV+
Sbjct: 614 AKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 360 SAEAEHGAYILVYQR 374
+AE AY+L Y++
Sbjct: 671 NAE----AYVLFYRK 681
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|344237481|gb|EGV93584.1| Ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus griseus]
Length = 910
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 41/255 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLARLHSSSHPTIVKAGSC 501
Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
KR S V FW PV TL +CL FF + L
Sbjct: 502 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 554
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 555 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 614
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV+
Sbjct: 615 AKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 671
Query: 360 SAEAEHGAYILVYQR 374
+AE AY+L Y++
Sbjct: 672 NAE----AYVLFYRK 682
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|332809268|ref|XP_003308213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
troglodytes]
gi|397472608|ref|XP_003807832.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
paniscus]
Length = 942
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 582
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 583 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 642
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 643 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 699
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 700 STVQNAE----AYVLFYRK 714
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|21619540|gb|AAH31366.1| Usp33 protein, partial [Mus musculus]
Length = 685
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 41/255 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 217 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 276
Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
KR S V FW PV TL +CL FF + L
Sbjct: 277 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 329
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 330 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 389
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV+
Sbjct: 390 AKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 446
Query: 360 SAEAEHGAYILVYQR 374
+AE AY+L Y++
Sbjct: 447 NAE----AYVLFYRK 457
>gi|351698851|gb|EHB01770.1| Ubiquitin carboxyl-terminal hydrolase 33 [Heterocephalus glaber]
Length = 909
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 440 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 496
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 497 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 549
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 550 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 609
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 610 QPFLAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 666
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 667 STVQNAE----AYVLFYRK 681
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 208
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 HKSRPGSVVPTN--LFQGIKTVNPMFRGYCQQDAQEFLRCLMDLLHEELK 256
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 41/255 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
KR S V FW PV TL +CL FF + L
Sbjct: 501 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 553
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 554 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 613
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV+
Sbjct: 614 AKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 360 SAEAEHGAYILVYQR 374
+AE AY+L Y++
Sbjct: 671 NAE----AYVLFYRK 681
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|75055226|sp|Q5REG5.1|UBP33_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|55726137|emb|CAH89842.1| hypothetical protein [Pongo abelii]
Length = 914
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 497
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 498 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 550
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 551 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 610
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 611 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 667
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 668 STVQNAE----AYVLFYRK 682
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|209413794|ref|NP_001124855.1| ubiquitin carboxyl-terminal hydrolase 33 [Pongo abelii]
Length = 910
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 497
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 498 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 550
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 551 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 610
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 611 QPFLAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 667
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 668 STVQNAE----AYVLFYRK 682
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|402855020|ref|XP_003892146.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Papio anubis]
gi|380786519|gb|AFE65135.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Macaca mulatta]
Length = 911
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 498
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 499 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 551
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 552 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 611
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 612 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 668
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 669 STVQNAE----AYVLFYRK 683
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|440905214|gb|ELR55625.1| Ubiquitin carboxyl-terminal hydrolase 33, partial [Bos grunniens
mutus]
Length = 929
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 460 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 516
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW P+ TL +CL FF + L
Sbjct: 517 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PI----VTLQDCLAAFFARDEL 569
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 570 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 629
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 630 QPFLAKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 686
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 687 STVQNAE----AYVLFYRK 701
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 169 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 226
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 227 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 274
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 41/255 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
KR S V FW PV TL +CL FF + L
Sbjct: 501 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 553
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 554 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 613
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV+
Sbjct: 614 AKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 360 SAEAEHGAYILVYQR 374
+AE AY+L Y++
Sbjct: 671 NAE----AYVLFYRK 681
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 532 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 588
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 589 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 641
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 642 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 701
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 702 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 758
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 759 STVQNAE----AYVLFYRK 773
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 289 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 346
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 347 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 394
>gi|417413175|gb|JAA52933.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 935
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 466 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 522
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW P+ TL +CL FF + L
Sbjct: 523 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PI----VTLQDCLAAFFARDEL 575
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 576 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 635
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 636 QPFLAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 692
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 693 STVQNAE----AYVLFYRK 707
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ + D K + + + M +W
Sbjct: 174 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLVRTDKKP--AICKSYLKLMTELW 231
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 232 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 279
>gi|444321522|ref|XP_004181417.1| hypothetical protein TBLA_0F03610 [Tetrapisispora blattae CBS 6284]
gi|387514461|emb|CCH61898.1| hypothetical protein TBLA_0F03610 [Tetrapisispora blattae CBS 6284]
Length = 1144
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 169/405 (41%), Gaps = 81/405 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QCL N + LN + I I+ S+G L + + M
Sbjct: 736 GLENMGNSCYLNCIIQCLLNNHELTKMFLNNSYEKHININSKLGSKGILAKSFARLVHSM 795
Query: 63 WSSGNLVLNTKA-----------ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK- 110
+ +G L + + A S F G+ QQD QEF +LL L+E+
Sbjct: 796 YQNGTLSIKNHSNKKNPPVQPITFKTACGSINSLFKGSNQQDCQEFCQFLLDGLHEDLNQ 855
Query: 111 --VVPDQYNGSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
P ST + +++ S R WE+F TT+ SV D++ GQ S ++C C
Sbjct: 856 CGANPPLKELSTEAERMREKL-SLRIASSIEWERFLTTDFSVIIDLYQGQYASQLKCQVC 914
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
TST Y+ F LS+PVP + +++
Sbjct: 915 GTTSTTYQTFSVLSVPVP---------------------KNKSIH--------------- 938
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKV 282
L +C N+F E L +C CKK+ K I RLP LI+ KRF N K
Sbjct: 939 -LLDCFNEFTKTEFLGKDELWSCTECKKKQPSTKTLTITRLPKNLIIHLKRF-DNMLHKN 996
Query: 283 TSPIKFPREGLDMEYYISAS--------------GRRVESRYTYDLCAVSNHIGKTALY- 327
+K+P LD+ Y + R + Y+L V+ H+G +LY
Sbjct: 997 NVFVKYPL-ILDLTNYWANDFDGKLPPGVTEELPARGQIPPFKYELSGVALHMG--SLYG 1053
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
GHYTAY + WY +DDTV + + + + +I+ Y
Sbjct: 1054 GHYTAYVNKGLKNGWYYFDDTVYRSIKYSSEMITQNAYVLFIIEY 1098
>gi|332809266|ref|XP_513509.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Pan
troglodytes]
gi|397472606|ref|XP_003807831.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
paniscus]
Length = 911
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 498
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 499 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 551
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 552 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 611
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 612 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 668
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 669 STVQNAE----AYVLFYRK 683
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|149026259|gb|EDL82502.1| rCG28827, isoform CRA_c [Rattus norvegicus]
Length = 680
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 124/254 (48%), Gaps = 41/254 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SDIF G + SSV+C C R S E F +LSLP+P L+ + V+ +C
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500
Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
KR S V FW PV TL +CL FF + L
Sbjct: 501 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 553
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 554 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 613
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ TYDL +V H G TA GHY AYCR WY +DD V+ V TV+
Sbjct: 614 AKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 360 SAEAEHGAYILVYQ 373
+AE AY+L Y+
Sbjct: 671 NAE----AYVLFYR 680
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 208
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 256
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 639 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 695
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 696 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 748
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 749 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 808
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 809 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 865
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 866 STVQNAE----AYVLFYRK 880
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 348 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 405
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
G++V + +++ F G QQDAQEFL L+ L+EE K + T
Sbjct: 406 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDT 463
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSD 151
++ T+ + + ++ + FQ+ E+ SD
Sbjct: 464 HAITTEESMEEDKSQSDVD-FQSCESCGSSD 493
>gi|167518329|ref|XP_001743505.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778604|gb|EDQ92219.1| predicted protein [Monosiga brevicollis MX1]
Length = 328
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 151/364 (41%), Gaps = 56/364 (15%)
Query: 17 INSVLQCL----SNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSGNLVLNT 72
+NSVLQCL T F +D+ +G+L + + + L
Sbjct: 1 MNSVLQCLLYARPLTMYFTQGRYRKDLNRTNPMGCKGELAEEYSALVVELNKRCYRYLAP 60
Query: 73 KAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSF 132
K L S+ +F+G QQQDAQEF + L L+E+ V +
Sbjct: 61 KFFKATLASFAPQFEGTQQQDAQEFASFFLDGLHEDLNRVRKKVCDCNLDGMPDH----L 116
Query: 133 RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 192
A W ++ T S+ D+F GQ R
Sbjct: 117 AADKAWNEYLTRHNSIIVDLFQGQYR---------------------------------- 142
Query: 193 CQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT-LYECLNKFFNGETLHN-TCQYCKK 250
S++RC C S + F L+LP+P + CL +F E ++ C CK
Sbjct: 143 ----SAMRCLTCGHESLNFSPFMFLTLPIPANPSVDIRACLQEFVRAERVNGWRCPKCKC 198
Query: 251 QSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYISASGRRVES 308
D K I RLPP+L++ KRF S F K+++ + FP L ++ + A+ + E
Sbjct: 199 ARDASKTLSIWRLPPLLMIHLKRFTFSGPFRDKLSTRVDFPLTNLKIQDGV-ANPKLQEQ 257
Query: 309 RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAY 368
+ Y L VSNH G + GHY A+CR + RWY +DD+ VSP+ ES + AY
Sbjct: 258 KRDYKLFGVSNHYGNMS-GGHYIAFCRDFQSRRWYKFDDSAVSPMP----ESQVCSNAAY 312
Query: 369 ILVY 372
+L Y
Sbjct: 313 LLFY 316
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 172/401 (42%), Gaps = 86/401 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLV---------- 52
G+ N GNTC++N VLQ +N F L E IP +G++V
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 53 DALV--NFMKMMWS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL 105
DAL+ K++ S ++ + + L + +F G QQQDA EFL Y+L L
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRL 306
Query: 106 NEEA-KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
+ E +++P G KQ S+ + +F G L S V C
Sbjct: 307 HTELLQLLPRL--GHEPLGLRGKQ------------------SIVTAVFGGTLLSVVHCM 346
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
NC+ S +E F +LSL +P +L+ +RT E+
Sbjct: 347 NCRTDSKTHEPFQDLSLDIPD--------RLQ--------RRTKEQEEVC---------- 380
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNF 278
+L L +FF E L ++ C C + K + I RLP VL L KRF +++
Sbjct: 381 --SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSY 438
Query: 279 TQKVTSPIKFPREGLDMEYY----ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYC 334
KV + + FP + LDM + +S + + + YDL AV H G A GHYTA+
Sbjct: 439 RSKVDTQVDFPMKSLDMSAFTVRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 498
Query: 335 RREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ G+W+ ++D+ V P V A+ YIL Y R+
Sbjct: 499 VHD--GQWFHFNDSSVRPATTDAV----AKCKPYILFYVRK 533
>gi|155372005|ref|NP_001094609.1| ubiquitin carboxyl-terminal hydrolase 33 [Bos taurus]
gi|281312480|sp|A6QNM7.1|UBP33_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|151556801|gb|AAI48906.1| USP33 protein [Bos taurus]
gi|296489213|tpg|DAA31326.1| TPA: ubiquitin specific protease 33 [Bos taurus]
Length = 912
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 129/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 443 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 499
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 500 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 552
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 553 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 612
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ ++ A V+ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 613 QPFL-AKDSPVQI-VTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 669
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 670 STVQNAE----AYVLFYRK 684
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|345801778|ref|XP_537108.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Canis lupus familiaris]
Length = 907
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 438 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 494
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW P+ TL +CL FF + L
Sbjct: 495 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PI----VTLQDCLAAFFARDEL 547
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 548 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 607
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 608 QPFLAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 664
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 665 STVQNAE----AYVLFYRK 679
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 147 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 204
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 205 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 252
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 172/401 (42%), Gaps = 86/401 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLV---------- 52
G+ N GNTC++N VLQ +N F L E IP +G++V
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 53 DALV--NFMKMMWS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL 105
DAL+ K++ S ++ + + L + +F G QQQDA EFL Y+L L
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRL 306
Query: 106 NEEA-KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
+ E +++P G KQ S+ + +F G L S V C
Sbjct: 307 HTELLQLLPRL--GHEPLGLRGKQ------------------SIVTAVFGGTLLSVVHCM 346
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
NC+ S +E F +LSL +P +L+ +RT E+
Sbjct: 347 NCRTDSKTHEPFQDLSLDIPD--------RLQ--------RRTKEQEEVC---------- 380
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNF 278
+L L +FF E L ++ C C + K + I RLP VL L KRF +++
Sbjct: 381 --SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSY 438
Query: 279 TQKVTSPIKFPREGLDMEYY----ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYC 334
KV + + FP + LDM + +S + + + YDL AV H G A GHYTA+
Sbjct: 439 RSKVDTQVDFPMKSLDMSAFTVRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 498
Query: 335 RREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ G+W+ ++D+ V P V A+ YIL Y R+
Sbjct: 499 VHD--GQWFHFNDSSVRPATTDAV----AKCKPYILFYVRK 533
>gi|367000257|ref|XP_003684864.1| hypothetical protein TPHA_0C02770 [Tetrapisispora phaffii CBS 4417]
gi|357523161|emb|CCE62430.1| hypothetical protein TPHA_0C02770 [Tetrapisispora phaffii CBS 4417]
Length = 970
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 168/403 (41%), Gaps = 80/403 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNFMKMM 62
G+ N GN+CY+N ++QCL ++ F + LN H + KS+ G L + M
Sbjct: 609 GLENMGNSCYLNCIIQCLLSSHEFTRIFLNNSYEKHINLKSKLGSKGVLARNFARLINTM 668
Query: 63 WSSG--------NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV-- 112
++ G N + LA S F + QQD+QEF +LL L+E+
Sbjct: 669 YTEGSEQSKNDRNGPVKPAQFKLACGSINSIFRSDLQQDSQEFCQFLLDGLHEDLNQCGA 728
Query: 113 --PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
P + K + WE++ TT+ SV D F GQ S +RC C TS
Sbjct: 729 NPPLKELSPNAEKMREKLSLRIASSIEWERYLTTDFSVIVDQFQGQYASQLRCKVCGGTS 788
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
T Y+ F LS+PVP G C+ + +
Sbjct: 789 TTYQAFSVLSVPVPRGKS------------CN-------------------------IID 811
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPI 286
C N+F E L C +CKK+ K I RLP LI+ KRF N K +
Sbjct: 812 CFNEFTKVENLETDELWACPHCKKKQPSTKKLTITRLPRNLIIHLKRF-DNMLNKNNIFV 870
Query: 287 KFPREGLDMEYYISA--SGR-------RVESR-----YTYDLCAVSNHIGKTALY-GHYT 331
K+P LD+ Y + GR + +R + Y L AV+ H G +LY GHYT
Sbjct: 871 KYPF-LLDLTPYWANDFDGRLPPGVTEELPTRGQIPPFNYKLNAVAAHFG--SLYGGHYT 927
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+Y + G W +DDT + P+ + E + AY+L Y R
Sbjct: 928 SYVDKGKFG-WRYFDDTKIRPL-KNSYECITS--NAYVLFYHR 966
>gi|367010522|ref|XP_003679762.1| hypothetical protein TDEL_0B04220 [Torulaspora delbrueckii]
gi|359747420|emb|CCE90551.1| hypothetical protein TDEL_0B04220 [Torulaspora delbrueckii]
Length = 825
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 166/406 (40%), Gaps = 86/406 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNFMKMM 62
G+ N GN+CYIN ++QCL T N+ LN+ H + S +G L M
Sbjct: 464 GLENMGNSCYINCIVQCLLGTHELTNIFLNKSYERHINMNSRLGSKGVLAKYFAKLTHSM 523
Query: 63 WSSGNLVLNTKA-------ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
+ + + LN K +A + F + QQD QEF +LL L+E+ +Q
Sbjct: 524 YQNASHKLNEKGKPVQPMEFKMACGTINSLFRESGQQDCQEFCQFLLDGLHEDL----NQ 579
Query: 116 YNGSTYSNTSSKQVGSFR--------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
G+ S + R + WE+F TT+ SV D+F GQ S +RC C
Sbjct: 580 CGGNPPLKELSDEAEKMREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASQLRCQVCG 639
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
TST Y+ F LS+PVP +C
Sbjct: 640 LTSTTYQPFSVLSVPVP---------------HAKSC----------------------N 662
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVT 283
+ +C +F E L +C CKK+ K I RLP LI+ KRF N K
Sbjct: 663 IIDCFKEFTKVEKLETDEQWSCPRCKKKQPSTKKLTITRLPRNLIIHLKRF-DNMMNKNN 721
Query: 284 SPIKFPREGLDMEYYISA--SGR-------RVESR-----YTYDLCAVSNHIGKTALY-G 328
+K+P LD+ Y + GR + +R + Y L +++H+G +LY G
Sbjct: 722 VFVKYPF-TLDLTPYWANDFDGRLPPGVTEELPTRGQSPPFNYKLYGIASHVG--SLYGG 778
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
HYT+Y + W +DDT PV T AY+L Y R
Sbjct: 779 HYTSYVDKGPKRGWCYFDDTSFRPVRNAT---ECITPNAYVLFYHR 821
>gi|254564991|ref|XP_002489606.1| Ubiquitin isopeptidase [Komagataella pastoris GS115]
gi|238029402|emb|CAY67325.1| Ubiquitin isopeptidase [Komagataella pastoris GS115]
gi|328350028|emb|CCA36428.1| ubiquitin carboxyl-terminal hydrolase 8 [Komagataella pastoris CBS
7435]
Length = 708
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 165/400 (41%), Gaps = 77/400 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
GI N GNTCY+N +LQCL + F + L D I I+ S+G L + ++
Sbjct: 353 GINNLGNTCYMNCILQCLLESDKFVSFFLQGDYKKHININSRLGSRGILATGFHLLVLLI 412
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
S + + + + K F +QQD EFL +LL +L+E+ ++ + +
Sbjct: 413 SRSSGKTVTPSSFAKDVSTVNKNFKLGEQQDCFEFLDFLLDSLHEDLNECGNEPPIAELT 472
Query: 123 NTSSKQVGSF----RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
K + + WE++ S+ D+F GQ S +
Sbjct: 473 PEEEKLREALPIRIASTIEWERYLKNNFSIVEDVFQGQYFSRLE---------------- 516
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG--GGTLYECLNKFF 236
C+ CK TST Y F LSLP+P TL +C F
Sbjct: 517 ----------------------CTVCKSTSTTYNSFSSLSLPIPLDRQNVTLDDCFQAFC 554
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ----KVTSPIKF 288
+ E L+ C CKK+ K I RLP VLI+ FKRF + K+ I +
Sbjct: 555 SVEELNGDDRWHCPSCKKKQVAFKKLGISRLPSVLIVHFKRFQVKWETGHIIKIDKFISY 614
Query: 289 PREGLDMEYYISASGRRVESR-------------YTYDLCAVSNHIGKTALYGHYTAYCR 335
P + L M+ Y + E R + Y L V+NH G GHYT+Y +
Sbjct: 615 PFK-LSMDKYWPKAQSEEELRNLEKLPSRNQNPPFNYRLTGVANHFGTRTSSGHYTSYVQ 673
Query: 336 REGTGRWYLYDDTVV-SPVDAQTVESAEAEHGAYILVYQR 374
+ G+WY +DD+ V S VD + + AY+L Y+R
Sbjct: 674 K--GGQWYYFDDSAVTSNVDRHKIVNG----NAYVLFYRR 707
>gi|10434504|dbj|BAB14279.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+C V FW PV TL +CL FF + L +C
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSC 582
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q P +L + +RF F+ K+++ + FP EGLD++ +++
Sbjct: 583 EKCKKLRNGVKFCKVQNFPEILCIHLRRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS 642
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 643 --PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 698
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 699 ---AYVLFYRK 706
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|281349070|gb|EFB24654.1| hypothetical protein PANDA_011320 [Ailuropoda melanoleuca]
Length = 929
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 129/259 (49%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 460 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 516
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW P+ TL +CL FF + L
Sbjct: 517 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PI----VTLQDCLAAFFARDEL 569
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 570 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 629
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ ++ A V+ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 630 QPFL-AKDSPVQI-VTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 686
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 687 STVQNAE----AYVLFYRK 701
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 169 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 226
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 227 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 274
>gi|42516567|ref|NP_055832.3| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Homo sapiens]
gi|116242838|sp|Q8TEY7.2|UBP33_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1;
Short=hVDU1
gi|119626774|gb|EAX06369.1| ubiquitin specific peptidase 33, isoform CRA_c [Homo sapiens]
Length = 942
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 582
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 583 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 642
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 643 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 699
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 700 STVQNAE----AYVLFYRK 714
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|410924033|ref|XP_003975486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Takifugu
rubripes]
Length = 909
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 135/285 (47%), Gaps = 42/285 (14%)
Query: 113 PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
P +G N + K+V +F K Q SV SD+F G + SSV+C C R S
Sbjct: 416 PKTASGWHSLNPAHKKVTTFSQPK--NKHQKKYRSVVSDVFDGTIVSSVQCLTCDRVSVT 473
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEI-----------------FW 215
E F ++SLP+P G +L SS ++ + + E FW
Sbjct: 474 LENFQDISLPIP---GKEDLAKLHSSTHQTSLVKAGSCGEAYAPQGWIAFVMEYIKSWFW 530
Query: 216 ELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWF 271
PV TL +CL FF + L +C+ CKK + VK ++Q LP +L +
Sbjct: 531 G---PVV----TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKMQNLPEILCIHL 583
Query: 272 KRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGH 329
KRF F+ K+++ + FP EGLD++ +++ YDL +V H G TA GH
Sbjct: 584 KRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS--FSQTTNYDLLSVICHHG-TASSGH 640
Query: 330 YTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
Y AYCR + WY +DD V+ V V++AE AY+L Y++
Sbjct: 641 YIAYCRNDENNLWYEFDDHRVTEVSESCVQNAE----AYVLFYKK 681
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L + D K L + + +W
Sbjct: 154 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGMVRTDKKP--ALCKSYQKLVSDLW 211
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ + V+ T + +++ F G QQD+QEFL L+ L+EE K
Sbjct: 212 HKNRSSYVVPTN-LFQGIKAINPMFRGYSQQDSQEFLRCLMDQLHEELK 259
>gi|194211186|ref|XP_001498483.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Equus
caballus]
Length = 961
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 492 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 548
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW P+ TL +CL FF + L
Sbjct: 549 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PIV----TLQDCLAAFFARDEL 601
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD+
Sbjct: 602 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKINTHVSFPLEGLDL 661
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 662 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 718
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 719 STVQNAE----AYVLFYRK 733
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 201 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 258
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 259 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 306
>gi|119626776|gb|EAX06371.1| ubiquitin specific peptidase 33, isoform CRA_e [Homo sapiens]
Length = 942
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 582
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 583 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 642
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 643 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 699
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 700 STVQNAE----AYVLFYRK 714
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|18698433|gb|AAL78314.1|AF383172_1 pVHL-interacting deubiquitinating enzyme 1 type I [Homo sapiens]
Length = 942
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 582
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 583 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 642
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 643 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 699
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 700 STVQNAE----AYVLFYRK 714
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240
Query: 64 ---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 241 YKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288
>gi|118366697|ref|XP_001016564.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89298331|gb|EAR96319.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 751
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 69/379 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFM 59
G+ G+ N N CY+N+ +QCL + P + L+E+ + I K+ ++V + +
Sbjct: 419 GVRGLHNQSNYCYLNASVQCLLSIPELNSYFLSEEYRRVVKIQGTRKA-LKIVPVYADMI 477
Query: 60 KMMW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
K+ +S N +L+ + ++ K F ++Q DAQEF+ Y+L+ + +E + N
Sbjct: 478 KLYEKTSENNILDMNLLKKVIK---KPFIPHEQHDAQEFIRYILSEIQDELNPILPSKNP 534
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ + ++ A Y+ +FQ S+ IF GQL S+
Sbjct: 535 TQFKDSE-------EAYQYYLRFQN---SIIDYIFSGQLSSN------------------ 566
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
V CS C S Y+ F +LSL + ++ +CLNKFF+
Sbjct: 567 --------------------VNCSKCGYISRTYDPFLDLSLGMDSKTTSVQDCLNKFFSE 606
Query: 239 ETLHN--TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS-NFTQKVTSPIKFPREGLDM 295
E L + C+ C + + K I + P +L L KRF +K+T IK+P + L +
Sbjct: 607 EILSDDYKCEKCNQNNKAKKQVLISKTPYILTLHLKRFKIYPKKRKITDFIKYPIQNLSI 666
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ Y+ S Y Y+L + H G + GHY +Y +RE RW+ DD V
Sbjct: 667 KQYVKNSS--TSGGYYYNLIGIIVHSG-SQDSGHYISYVKRE--NRWFCCDDGKYQEVSE 721
Query: 356 QTVESAEAEHGAYILVYQR 374
+TV E Y+L YQR
Sbjct: 722 KTVIKQE----VYLLFYQR 736
>gi|42516565|ref|NP_963918.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Homo sapiens]
gi|119626772|gb|EAX06367.1| ubiquitin specific peptidase 33, isoform CRA_a [Homo sapiens]
Length = 911
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 498
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 499 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 551
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 552 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 611
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 612 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 668
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 669 STVQNAE----AYVLFYRK 683
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|395536735|ref|XP_003770367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Sarcophilus
harrisii]
Length = 892
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 139/293 (47%), Gaps = 55/293 (18%)
Query: 117 NGSTYSNTSSKQVGSFRALHY----WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
+ S +S T+S G RAL +K Q SV SDIF G + SSV+C C R S
Sbjct: 405 SSSLWSGTTS---GHKRALPASSPKRKKQQKRYRSVISDIFDGTIVSSVQCLTCDRVSVT 461
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSS------VRCSNCKRT------------------- 207
E F +LSLP+P G +L S+ V+ +C
Sbjct: 462 LETFQDLSLPIP---GKEDLARLHSASHPTAMVKAGSCGEAYAPQGWIALLVEYLRRFVV 518
Query: 208 STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRL 263
S V FW PV TL +CL FF + L +C+ CKK + VK ++Q+
Sbjct: 519 SCVPSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSCERCKKLRNGVKFCKVQKF 571
Query: 264 PPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHI 321
P +L + KRF F+ K+++ + FP EGLD++ +++ TYDL +V H
Sbjct: 572 PEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDS--PAQIVTYDLLSVICHH 629
Query: 322 GKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
G TA GHY AYCR WY +DD V+ V TV++AE AY+L Y++
Sbjct: 630 G-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEVTVQNAE----AYVLFYRK 677
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK--- 60
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + MK
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMKDFL 208
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 FLPRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 256
>gi|5689531|dbj|BAA83049.1| KIAA1097 protein [Homo sapiens]
Length = 980
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 511 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 567
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 568 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 620
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 621 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 680
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 681 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 737
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 738 STVQNAE----AYVLFYRK 752
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 221 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 278
Query: 64 ---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 279 YKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 326
>gi|119626775|gb|EAX06370.1| ubiquitin specific peptidase 33, isoform CRA_d [Homo sapiens]
Length = 911
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 498
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 499 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 551
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 552 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 611
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 612 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 668
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 669 STVQNAE----AYVLFYRK 683
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|18698435|gb|AAL78315.1|AF383173_1 pVHL-interacting deubiquitinating enzyme 1 type II [Homo sapiens]
gi|168278803|dbj|BAG11281.1| ubiquitin carboxyl-terminal hydrolase 33 [synthetic construct]
Length = 911
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 498
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW PV TL +CL FF + L
Sbjct: 499 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 551
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 552 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 611
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ TYDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 612 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 668
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 669 STVQNAE----AYVLFYRK 683
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 ---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 YKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|254914123|gb|ACT83760.1| AT03982p [Drosophila melanogaster]
Length = 240
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 116/241 (48%), Gaps = 47/241 (19%)
Query: 138 WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRS 197
WE + E S+ D+FVGQL+S+++C+ C TS ++ FW+LS+P+P S
Sbjct: 42 WEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLP------------S 89
Query: 198 SVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSD 253
S RC L CL+ F E L TC CK +
Sbjct: 90 SSRCK-------------------------LEACLDLFIREEVLDGDEMPTCAKCKTRRK 124
Query: 254 LVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYD 313
K + IQR P L++ KRFS K+++ ++FP D E + + G S Y
Sbjct: 125 CTKSFTIQRFPKYLVIHLKRFSETRWSKLSNIVEFPTS--DSELNMGSYGANSNSNVHYS 182
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
L A+SNH+G TA GHY A C+ + +W+ ++D +VS DA + E+ AYIL Y+
Sbjct: 183 LYAISNHMGSTA-GGHYVALCKHPVSRKWHEFNDNIVS--DALS-ENHLVSSSAYILFYE 238
Query: 374 R 374
R
Sbjct: 239 R 239
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 172/401 (42%), Gaps = 86/401 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLV---------- 52
G+ N GNTC++N VLQ +N F L E IP +G++V
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 53 DALV--NFMKMMWS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL 105
DAL+ K++ S ++ + + L + +F G QQQDA EFL Y+L L
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRL 306
Query: 106 NEEA-KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
+ E +++P G KQ S+ + +F G L S V C
Sbjct: 307 HTELLQLLPRL--GHEPLGLRGKQ------------------SIVTAVFGGTLLSVVHCM 346
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
NC+ S +E F +LSL +P +L+ +RT E+
Sbjct: 347 NCRTDSKTHEPFQDLSLDIPD--------RLQ--------RRTKEQEEVC---------- 380
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNF 278
+L L +FF E L ++ C C + K + I RLP VL L KRF +++
Sbjct: 381 --SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSY 438
Query: 279 TQKVTSPIKFPREGLDMEYY----ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYC 334
KV + + FP + LDM + ++ + + + YDL AV H G A GHYTA+
Sbjct: 439 RSKVDTQVDFPMKSLDMSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 498
Query: 335 RREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ G+W+ ++D+ V P V A+ YIL Y R+
Sbjct: 499 VHD--GQWFHFNDSSVRPATTDAV----AKCKPYILFYVRK 533
>gi|348521962|ref|XP_003448495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Oreochromis niloticus]
Length = 911
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 137/285 (48%), Gaps = 42/285 (14%)
Query: 113 PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
P +G N + K+V +F K Q S+ SD+F G + SSV+C C R S
Sbjct: 418 PKAASGWPSLNPAHKKVTTFSPPK--NKRQKKYRSIISDVFDGTIVSSVQCLTCDRVSVT 475
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEI-----------------FW 215
E F ++SLP+P G +L SS ++ + + E FW
Sbjct: 476 LENFQDISLPIP---GKEDLAKLHSSTHQTSLVKAGSCGEAYAPQGWIAFVMEYIKSWFW 532
Query: 216 ELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWF 271
PV TL +CL FF + L +C+ CKK + VK ++Q LP +L +
Sbjct: 533 G---PVV----TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKMQSLPEILCIHL 585
Query: 272 KRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGH 329
KRF F+ K+++ + FP EGLD++ +++ + +YDL +V H G TA GH
Sbjct: 586 KRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSSAQTT--SYDLLSVICHHG-TASNGH 642
Query: 330 YTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
Y AYCR + WY +DD V+ V V++AE AY+L Y++
Sbjct: 643 YIAYCRNDVNNLWYEFDDQSVTEVSEACVQNAE----AYVLFYKK 683
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L + D K L + + +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSDLW 208
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T + +++ F G QQD+QEFL L+ L+EE K
Sbjct: 209 HKNRPSYVVPTN-LFQGIKAINPMFRGYAQQDSQEFLRCLMDQLHEELK 256
>gi|157123971|ref|XP_001653999.1| hypothetical protein AaeL_AAEL009702 [Aedes aegypti]
gi|108874166|gb|EAT38391.1| AAEL009702-PA [Aedes aegypti]
Length = 1214
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 56/276 (20%)
Query: 140 KFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP------------PGG 187
K + E S+ SDIF G+L SSV+C C R ST E F +LSLP+P PG
Sbjct: 398 KDKLPERSIISDIFDGKLLSSVQCLTCDRISTREETFQDLSLPIPGKDHLAVLHQNHPGM 457
Query: 188 GTLYECQLR------SSVRCSNCKRTST----------------VYEIFWELSLPVPPGG 225
+ S + CS+ T V FW ++
Sbjct: 458 PSPSAHPSSPVAGSSSGITCSDAVYPVTGDSWMWWFWNWPFWSWVRSWFWGPAV------ 511
Query: 226 GTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FT 279
TL++C+ FF+ + L +C+ C K + VK + LP +L + KRF + ++
Sbjct: 512 -TLHDCMAAFFSADELKGDNMYSCEKCNKLRNGVKFSRVLALPEMLCVHLKRFRHDLSYS 570
Query: 280 QKVTSPIKFPREGLDMEYYISASGRRVESRYT-YDLCAVSNHIGKTALYGHYTAYCRREG 338
K++SP+ FP GLDM Y+ + +S T YDL AV H G T GHYT++ + E
Sbjct: 571 SKISSPVNFPMNGLDMRPYLH---KDCKSEVTSYDLGAVICHHG-TVGGGHYTSFAKHEP 626
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
TG+W+ +DD +V+ V + V++ E AY+L Y++
Sbjct: 627 TGKWFEFDDQLVTQVSPEDVQNCE----AYVLFYRK 658
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD-----SKSQGQLVDALVNF 58
GL G+ N NTCY+NS +Q LSN+P L+ I D + S+ L
Sbjct: 165 GLVGLQNIANTCYMNSAIQALSNSPPLTGYFLDCGSIIETDLLGNQTVSKPGLAKHYHKL 224
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV 112
+K MW + IL +R F G QQ D QEFL + L+EE K V
Sbjct: 225 IKEMWCKNRRYVVPSGILYGIRIVHPMFRGYQQHDTQEFLRCFMDQLHEELKEV 278
>gi|388580255|gb|EIM20571.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 515
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 159/370 (42%), Gaps = 75/370 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ--LVDALVNFMKMMWS 64
G+ N GNTC++NS LQCL +TP+ N L ++ H +S + +++AL K +S
Sbjct: 117 GLRNLGNTCFLNSTLQCLLHTPSLMNFLQSQ----HAKGRSDNKFCMIEALRTCAKTTFS 172
Query: 65 SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
++ L++ + +Q+DAQEFL Y + AL ++Y +
Sbjct: 173 GSGGSFAPAPVVRNLKAIARHMTVGRQEDAQEFLRYAVDALQ------------ASYLSN 220
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
K V K + +E++ IF G+LRS V C N K S ++ F +LS+ V
Sbjct: 221 YPKTV----------KEKHSESNPIHKIFGGKLRSRVLCQNSKHASDTFDTFLDLSVNV- 269
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
CSN + + + L E NK+
Sbjct: 270 --------------KGCSNIQESFKSFTALDRL------------EGANKY--------K 295
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISASGR 304
C+ CKK K + + P L + KRFS QK+ + F E LD++ Y+S
Sbjct: 296 CENCKKPVAATKQFTVHEAPQCLTVHLKRFSP-LGQKLNGSLSF-DENLDIQKYMS---- 349
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
+ + Y L V +H G +A GHY A+ + GRWY +D +VSP +
Sbjct: 350 KGQQSPKYRLYGVVSHYGGSARSGHYIAHVKAP-NGRWYEMNDDLVSP-----SKPPFGS 403
Query: 365 HGAYILVYQR 374
AY+L Y++
Sbjct: 404 KNAYVLFYEK 413
>gi|322800359|gb|EFZ21363.1| hypothetical protein SINV_03789 [Solenopsis invicta]
Length = 918
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 184/477 (38%), Gaps = 121/477 (25%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMM 62
GL G+ N GNTCY+N+ LQ LSN L+ + SK + L +N ++ M
Sbjct: 183 GLVGLQNIGNTCYMNAALQALSNVSPLTQFFLDCGHMVSYMSKDRKPGLSLNYLNLIRDM 242
Query: 63 W---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--------- 110
W + G +V IL +R+ F G Q D QEFL + L+EE K
Sbjct: 243 WNKKTRGYVV--PHGILSGIRTVHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDV 300
Query: 111 ----------VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSS 160
D+ N SS+ + +E S SD G+ +
Sbjct: 301 QLRLKGLGDQSSEDEDETEIDGNASSQSDAEYETC----DSGVSEQSSLSD--EGERGTK 354
Query: 161 VRCSNCKRTSTVYEIFW---------ELSLPVPPGG----------------------GT 189
R S +T + F E +LP P
Sbjct: 355 RRYSRVSQTEKLRNKFTSRNMKKSNVEPTLPFAPPQRSPQNSPAKHRTKKQMKTRSIISD 414
Query: 190 LYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG----------------------- 226
++ +L SSV+C C R ST E F +LSLP+P
Sbjct: 415 TFDGKLLSSVQCLTCDRISTRVETFQDLSLPIPSRDHIDMLHQGSLTPQKAGPCSDVVYV 474
Query: 227 -----------------------TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYE 259
+L++CL+ FF+ + L +C+ C K + +K +
Sbjct: 475 TNQSGWLSWFLQWMRSWFWGPVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSK 534
Query: 260 IQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAV 317
+ LP +L + KRF F+ K+ + + FP EGLDM Y+ + TY+L +V
Sbjct: 535 VLELPEILCIHLKRFRHELMFSSKIANYVSFPLEGLDMRPYLHKEC--ISKVTTYNLISV 592
Query: 318 SNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
H G TA GHYT Y +WY +DD V+ V +TV+ E AY+L Y++
Sbjct: 593 ICHHG-TAGGGHYTCYALNPIANKWYEFDDQCVTEVSPETVKHCE----AYVLFYKK 644
>gi|229558006|sp|A6H8I0.1|UBP22_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|148921505|gb|AAI46619.1| Usp22 protein [Danio rerio]
Length = 506
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 171/404 (42%), Gaps = 91/404 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 210
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG
Sbjct: 211 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK----DDNGK 266
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+N + + IF G L+S V C C ST + FW++
Sbjct: 267 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 308
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSL----------PVPPGGGTLY 229
SL + PG T FW LS P G TL
Sbjct: 309 SLDL-PGSST-----------------------PFWPLSPGSDGSVVNGDSHPSGATTLT 344
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
+CL +F E L ++ C C + K ++RLP V KRF S+ +K+T
Sbjct: 345 DCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRRKIT 404
Query: 284 SPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYT 331
+ + FP E LDM ++++S R+ +Y Y L AV NH G T GHYT
Sbjct: 405 TYVSFPLE-LDMTPFMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQG-TLESGHYT 462
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ R+ +W+ DD +++ + V +E Y+L Y ++
Sbjct: 463 TFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 501
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 172/401 (42%), Gaps = 86/401 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLV---------- 52
G+ N GNTC++N VLQ +N F L E IP +G++V
Sbjct: 188 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 247
Query: 53 DALV--NFMKMMWS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL 105
DAL+ K++ S ++ + + L + +F G QQQDA EFL Y+L L
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRL 307
Query: 106 NEEA-KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
+ E +++P G KQ S+ + +F G L S V C
Sbjct: 308 HTELLQLLPRL--GHEPLGLRGKQ------------------SIVTAVFGGTLLSVVHCM 347
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
NC+ S +E F +LSL +P +L+ +RT E+
Sbjct: 348 NCRTDSKTHEPFQDLSLDIPD--------RLQ--------RRTKEQEEVC---------- 381
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNF 278
+L L +FF E L ++ C C + K + I RLP VL L KRF +++
Sbjct: 382 --SLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSY 439
Query: 279 TQKVTSPIKFPREGLDMEYY----ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYC 334
KV + + FP + LDM + ++ + + + YDL AV H G A GHYTA+
Sbjct: 440 RSKVDTQVDFPMKSLDMSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFA 499
Query: 335 RREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ G+W+ ++D+ V P V A+ YIL Y R+
Sbjct: 500 VHD--GQWFHFNDSSVRPATTDAV----AKCKPYILFYVRK 534
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 166/373 (44%), Gaps = 62/373 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++N++LQ L + LV+ + +W
Sbjct: 208 GLRNLGNTCFMNAILQSLRS------------------------LVEEFRKTLCALWQGS 243
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+ +++ + F G QQQDA EF+ YLL L+ E + +NG + S
Sbjct: 244 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE---LQGGFNGVS----RS 296
Query: 127 KQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
+ +L K AS V + IF G L++ V C C S ++ F +LSL +P
Sbjct: 297 AMLQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPS 356
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT- 244
Q RS + S + V + +++L + +CL F + E L T
Sbjct: 357 --------QFRS--KRSKNQENGPVCSLRAQITL--------VSDCLRSFTDLEELDETE 398
Query: 245 ---CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYI 299
C CKK+ K + IQ+LP VL L KRF ++ KV + ++FP GLDM+ Y+
Sbjct: 399 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 458
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
YDL AV H G GHYTAY E GRW+ ++D+ V+ D +TV
Sbjct: 459 LEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFHFNDSTVTLTDEETVG 516
Query: 360 SAEAEHGAYILVY 372
A+ AYIL Y
Sbjct: 517 KAK----AYILFY 525
>gi|397515264|ref|XP_003827874.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Pan paniscus]
Length = 373
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 165/377 (43%), Gaps = 65/377 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCL-SNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ G+ N GNTC +N++LQCL S P L + I + S+ + A M M
Sbjct: 42 GVTGLWNLGNTCCVNAILQCLCSILPLVEYFLTGKYITALQNDCSE--VATAFAYLMTDM 99
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
W + ++ + AL + F QQDAQEFL+ +L L E K +Y+ YS
Sbjct: 100 WLGDSDCVSPEIFWSALGNLYPAFTKKMQQDAQEFLICVLNELYEALK----KYH---YS 152
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
+ GS + K+ TTE SV + +F
Sbjct: 153 RRRPYEKGSTQRC--CRKWITTETSVITQLF----------------------------- 181
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL 241
E QL S+ C C++ + E+F SLP+P +L +CL FF + L
Sbjct: 182 ---------EEQLNYSIVCLKCEKCTYKNEVFTVFSLPIPSKYACSLRDCLQCFFQQDAL 232
Query: 242 ----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDM 295
C +C+ + + I + P ++I KRF T +K+ + I +P LD+
Sbjct: 233 TWNNEIHCSFCETKQETAVRASISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDL 292
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
YI + R+ Y+LCAV NH G GHYTA+ + T WY +D+T VS +
Sbjct: 293 TPYICSIFRKYPK---YNLCAVVNHSGDLE-GGHYTAFYKNSVTQAWYSFDNTRVSEIPD 348
Query: 356 QTVESAEAEHGAYILVY 372
++++A AY+L Y
Sbjct: 349 TSIQNA----MAYLLFY 361
>gi|448534895|ref|XP_003870857.1| Doa4 protein [Candida orthopsilosis Co 90-125]
gi|380355213|emb|CCG24729.1| Doa4 protein [Candida orthopsilosis]
Length = 799
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 170/398 (42%), Gaps = 87/398 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPA-----FRNVLLN----EDIPIHPDSKSQGQLVDALVN 57
G+ N GN+CY+N ++QCL+ TP F ++ +N + I ++ +QG+L A V
Sbjct: 415 GLVNLGNSCYMNCMIQCLAATPQLTTFFFPSISMNGSYKQHINVNNKLGTQGKLTSAFVE 474
Query: 58 FMKMMWSSGNLVLNTKAI--LLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP-- 113
+ M ++ V + + S ++F QQD EF+ +LL L+E+ +P
Sbjct: 475 LLLNMLNNNGKVFSPSKFKKIAGECSPGRQFASCSQQDCTEFVTFLLDGLHEDLNQMPVL 534
Query: 114 DQYNGSTYSNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
D S + +Q + L WE++ S+ D F GQ S +RC C
Sbjct: 535 DPNEKKRISELTPEQEKNREILPVRLASTIEWERYLKLNFSIIVDNFQGQYLSQLRCLEC 594
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
+ TST Y F L+LP+P +R + ++
Sbjct: 595 RTTSTTYNAFSILTLPIP--------------------ERLNQTQKV------------- 621
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--- 279
TL +C+ +F E L + C CKK + K I RLP VLI+ FKRF N +
Sbjct: 622 TLQDCIEEFTTTELLEDGNKWHCSRCKKFTRSTKKIAITRLPQVLIVNFKRFKVNTSGQI 681
Query: 280 QKVTSPIKFP-REGLDMEYYISASG-------------------------RRVESRYTYD 313
+K+ + + +P E LD+ Y + G R E + Y
Sbjct: 682 RKLETFVTYPVTEMLDLTKYWTKPGTIMGDADAPKMSIEEETTIIESFPVRNQEPPFRYK 741
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L V+NH G T GHYT+Y + G RW +DD+ ++
Sbjct: 742 LYGVANHFG-TLSTGHYTSYVYKRGKKRWCYFDDSKIT 778
>gi|348524280|ref|XP_003449651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Oreochromis niloticus]
Length = 921
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 137/288 (47%), Gaps = 53/288 (18%)
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
G YS ++ + S R +K Q+ SV SDIF G + S V+C C R ST E F
Sbjct: 426 GPAYSFKKAQLLLSAR-----KKKQSHYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQ 480
Query: 178 ELSLPVPPGGGTLYECQLRSS------VRCSNCKRT-------------------STVYE 212
+LSLP+P G +L SS V+ C T S +
Sbjct: 481 DLSLPIP---GKEDLAKLHSSIHQNLPVKTGVCPDTYGSQGWISYIMDSIRRFVVSCIPS 537
Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLI 268
FW + TL +CL FF + L +C+ CKK + VK ++ RLP +L
Sbjct: 538 WFWGPMV-------TLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILC 590
Query: 269 LWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
+ KRF ++ K++S + FP EGLDM +++ + TYDL +V H G TA
Sbjct: 591 IHLKRFRHEVMYSFKISSHVSFPLEGLDMRPFLAKESPSQVT--TYDLLSVICHHG-TAG 647
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHY AYC+ G+WY +DD V+ V V++AE AY+L Y++
Sbjct: 648 SGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE----AYVLFYRK 691
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L+ + D K L + + +W
Sbjct: 147 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDCGGLVRTDKKP--ALCKSYQKLISELW 204
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 205 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 252
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 167/373 (44%), Gaps = 63/373 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+AN GNTC++NSVLQCL++TPA N L + + S L + + + + SSG
Sbjct: 3 GLANLGNTCFLNSVLQCLTHTPALANFALRGEHKKYKTGGSFNALYEIGEHVARALNSSG 62
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-AKVVPDQYNGSTYSNTS 125
+ T A++ LR+ +K F +Q+DA E LL A++++ +VV + S S
Sbjct: 63 RTIAPT-ALVKNLRALSKTFRKGRQEDAHELARCLLDAMHKKCVEVVKPK-----ISPNS 116
Query: 126 SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
++ SF W+ +F G+LRS V C C R S ++ F +LSL V
Sbjct: 117 ARAETSF----VWK------------VFGGRLRSQVNCKTCGRNSETFDPFLDLSLEVG- 159
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTC 245
R +V F + G Y C K N ++
Sbjct: 160 --------------------RAKSVLGAFKMFTHTEVLDGDNKYRCEGKSANSKS----- 194
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQ-KVTSPIKFPREGLDMEYYISASG 303
+ K S K + + + P VL L KRF+ F + K+ +++P E LD+ Y S G
Sbjct: 195 -HLTKAS---KQFTVNQAPNVLALQLKRFAYVPFGRGKLNHFVEYPLE-LDITPYTSDEG 249
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYC-RREGTGRWYLYDDTVVSPVDAQTVESAE 362
+ YDL V H G ++ GHY YC + TG W L DD ++ V + V +
Sbjct: 250 LTSRGKAVYDLYGVLVHAGNSSNSGHY--YCFVKVATGTWCLMDDDEITSVSEKVVLKQQ 307
Query: 363 AEHGAYILVYQRR 375
AY+L Y RR
Sbjct: 308 ----AYLLFYARR 316
>gi|426215772|ref|XP_004002143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Ovis aries]
Length = 912
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + SSV+C C R S E F +LSLP+P G +L SS V+
Sbjct: 443 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 499
Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
+C KR S V FW P+ TL +CL FF + L
Sbjct: 500 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PI----VTLQDCLAAFFARDEL 552
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++Q+ P +L + KRF F+ K+++ + FP EGLD+
Sbjct: 553 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 612
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ YDL +V H G TA GHY AYCR WY +DD V+ V
Sbjct: 613 QPFLAKDSP--AQIVNYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 669
Query: 356 QTVESAEAEHGAYILVYQR 374
TV++AE AY+L Y++
Sbjct: 670 STVQNAE----AYVLFYRK 684
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|327276737|ref|XP_003223124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 2
[Anolis carolinensis]
Length = 890
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + SSV+C C R S E F +LSLP+P G +L S+ ++ +
Sbjct: 430 SVISDIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSASHQTSLVK 486
Query: 207 TSTVYEI-----------------FWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+ E FW ++ TL +CL FF + L +C
Sbjct: 487 AGSCGEAYAPQGWIAFFVEYFKSWFWGPTV-------TLQDCLAAFFARDELKGDNMYSC 539
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q P +L + KRF + F+ K+ + + FP EGLD++ +++
Sbjct: 540 EKCKKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDS 599
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
YDL +V H G TA+ GHY AYC RWY +DD V+ V TV++AE
Sbjct: 600 PA--QIVMYDLLSVICHHG-TAINGHYIAYCWNNLNNRWYEFDDQSVTEVTESTVQNAE- 655
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 656 ---AYVLFYRK 663
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + M +W
Sbjct: 145 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGNLARTDKKP--AICRSYYKLMTELW 202
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
S V+ T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 203 HKSRPGAVVPTN-LFQGIKTVNPAFRGYSQQDAQEFLRCLMDLLHEELK 250
>gi|327276735|ref|XP_003223123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 1
[Anolis carolinensis]
Length = 897
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + SSV+C C R S E F +LSLP+P G +L S+ ++ +
Sbjct: 437 SVISDIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSASHQTSLVK 493
Query: 207 TSTVYEI-----------------FWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+ E FW ++ TL +CL FF + L +C
Sbjct: 494 AGSCGEAYAPQGWIAFFVEYFKSWFWGPTV-------TLQDCLAAFFARDELKGDNMYSC 546
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++Q P +L + KRF + F+ K+ + + FP EGLD++ +++
Sbjct: 547 EKCKKLRNGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDS 606
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
YDL +V H G TA+ GHY AYC RWY +DD V+ V TV++AE
Sbjct: 607 PA--QIVMYDLLSVICHHG-TAINGHYIAYCWNNLNNRWYEFDDQSVTEVTESTVQNAE- 662
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 663 ---AYVLFYRK 670
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L+ D K + + M +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGNLARTDKKP--AICRSYYKLMTELW 209
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
S V+ T + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 210 HKSRPGAVVPTN-LFQGIKTVNPAFRGYSQQDAQEFLRCLMDLLHEELK 257
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 164/373 (43%), Gaps = 69/373 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++N++LQ L + LV+ + +W
Sbjct: 402 GLRNLGNTCFMNAILQSLRS------------------------LVEEFRKTLCALWQGS 437
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+ +++ + F G QQQDA EF+ YLL L+ E + +NG + S
Sbjct: 438 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQ---GGFNGVSRSAILQ 494
Query: 127 KQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
+ L K AS V + IF G L++ V C C S ++ F +LSL +P
Sbjct: 495 EN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPS 550
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT- 244
Q RS KR+ + + PV +L +CL F + E L T
Sbjct: 551 --------QFRS-------KRSKN------QENGPV----CSLRDCLRSFTDLEELDETE 585
Query: 245 ---CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYI 299
C CKK+ K + IQ+LP VL L KRF ++ KV + ++FP GLDM+ Y+
Sbjct: 586 LYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYL 645
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
YDL AV H G GHYTAY E GRW+ ++D+ V+ D +TV
Sbjct: 646 LEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHFNDSTVTLTDEETVV 703
Query: 360 SAEAEHGAYILVY 372
A+ AYIL Y
Sbjct: 704 KAK----AYILFY 712
>gi|170594039|ref|XP_001901771.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158590715|gb|EDP29330.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 850
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 169/386 (43%), Gaps = 73/386 (18%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK--SQGQLVDALVN 57
+PG G+ N GNTC++NSVLQ L NT R + + ++ +K + G +
Sbjct: 518 NPGYTGLYNLGNTCFMNSVLQTLFNTIPLRRIFTKNEFFKFVNRTNKMGTMGIISSVFSA 577
Query: 58 FMKMMWSSGNLVLNTKAIL--LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPD 114
M +WS L + L A DG QQ DAQEF +YLL AL+E+ +V+
Sbjct: 578 MMDSVWSGLFSALRPQQFLETFAAEVNASLADG-QQHDAQEFQIYLLDALHEDTNRVMKR 636
Query: 115 QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+ Y+ + K A Y EK + S SDIF Q SS++C+ CKR S +E
Sbjct: 637 KTFEQNYTGANLKA----EAADYNEKLRGFACSPISDIFNCQTVSSLQCNKCKRQSVTFE 692
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNK 234
+LS+ VP R ST+ + C+
Sbjct: 693 ELAQLSIEVP--------------------NRNSTIED------------------CIRN 714
Query: 235 FFNGETLHNTCQY----CKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKF 288
F L +C++ C+ + + +LP VL++ KRF+ + QK + + F
Sbjct: 715 HFQDVELDGSCKWRCPDCESLQTATRRTFLWKLPEVLVIHLKRFTFMGDNWQKNDAYVTF 774
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
L +++S Y + L AV NH G GHYTA R + T +W L+DD
Sbjct: 775 NTFPL-----------KLQSEY-FSLYAVVNHRGSLN-SGHYTAVVRNQITKQWLLFDDD 821
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQR 374
VV+P+D + S A+IL +Q+
Sbjct: 822 VVAPIDVDLICS----KYAFILYFQK 843
>gi|195121782|ref|XP_002005398.1| GI19092 [Drosophila mojavensis]
gi|193910466|gb|EDW09333.1| GI19092 [Drosophila mojavensis]
Length = 940
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRS-SVRCSNCK 205
S+ SD+F G+L SSV+C C R ST E F +LSLP+P Q S SV+ N
Sbjct: 293 SIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPTRDFLNVLHQTHSLSVQSLNAA 352
Query: 206 RTSTVYE----IFWELSLP---VPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDL 254
++ I W ++ + TLY+C+ FF+ + L +C+ C K
Sbjct: 353 DLASARSNEGWIAWMWNMVRSWIFGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTG 412
Query: 255 VKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTY 312
+K + LP VL + KRF + ++ K++S + FP EG DM Y+ + TY
Sbjct: 413 IKYSRVLNLPEVLCIHLKRFRHDLSYSSKISSHVYFPLEGFDMRPYLHKDC--TSTVPTY 470
Query: 313 DLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
+LC+V H G T GHYT Y R GRWY YDD +V V V++ + AY+L Y
Sbjct: 471 NLCSVICHHG-TVGGGHYTCYARNALNGRWYEYDDQLVMEVTPDVVQNCQ----AYVLFY 525
Query: 373 QRR 375
Q+
Sbjct: 526 QKH 528
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-----EDIPIHPDSKSQGQLVDALVNF 58
GL G+ N NTCY+NS LQ LSN + +N E I P +K G L +
Sbjct: 70 GLVGLQNIANTCYMNSALQALSNLSPVTHYFINCSDIVEHIASTPRAKPAG-LAKSYQRL 128
Query: 59 MKMMW---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
M+ +W L + IL +RS F G QQ D QEFL + L+EE
Sbjct: 129 MQEIWLDVDEPKDYLAPRGILYGIRSVHPMFRGYQQHDTQEFLRCFMDQLHEE 181
>gi|410902432|ref|XP_003964698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Takifugu rubripes]
Length = 511
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 176/408 (43%), Gaps = 94/408 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 210
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K G
Sbjct: 211 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK-------GD 263
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
T + + K+ + + + IF G L+S V C C ST + FW++
Sbjct: 264 TIRDDNGKKANNPNHCN----------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 313
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------- 226
SL + PG T FW P+ PGG
Sbjct: 314 SLDL-PGSST-----------------------PFW----PLSPGGDGGTMNGESHLSGS 345
Query: 227 -TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT 279
TL +CL +F E L ++ C C + K +++LP V KRF S+
Sbjct: 346 TTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTLKKLPIVACFHLKRFEHSAKLR 405
Query: 280 QKVTSPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALY 327
+K+T+ + FP E LDM ++++S R+ +Y Y L AV NH G T
Sbjct: 406 RKITTYVSFPLE-LDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLES 463
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT++ R+ +W+ DD +++ + V +E Y+L Y ++
Sbjct: 464 GHYTSFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 506
>gi|410902430|ref|XP_003964697.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Takifugu rubripes]
Length = 527
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 173/408 (42%), Gaps = 95/408 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 227
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG
Sbjct: 228 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGK 287
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+N + + IF G L+S V C C ST + FW++
Sbjct: 288 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 329
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------- 226
SL + PG T FW P+ PGG
Sbjct: 330 SLDL-PGSST-----------------------PFW----PLSPGGDGGTMNGESHLSGS 361
Query: 227 -TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT 279
TL +CL +F E L ++ C C + K +++LP V KRF S+
Sbjct: 362 TTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTLKKLPIVACFHLKRFEHSAKLR 421
Query: 280 QKVTSPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALY 327
+K+T+ + FP E LDM ++++S R+ +Y Y L AV NH G T
Sbjct: 422 RKITTYVSFPLE-LDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLES 479
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT++ R+ +W+ DD +++ + V +E Y+L Y ++
Sbjct: 480 GHYTSFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 522
>gi|355727928|gb|AES09357.1| ubiquitin specific peptidase 2 [Mustela putorius furo]
Length = 217
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 122/242 (50%), Gaps = 50/242 (20%)
Query: 138 WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRS 197
W K+ E S D+FVGQL+SS+ C++C STV++ FW+LSLP+ G
Sbjct: 13 WRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRG---------- 62
Query: 198 SVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSD 253
+ E+ TL +C+ F + L TC C+ +
Sbjct: 63 ----------------YPEV---------TLMDCMRLFTKEDVLDGDEKPTCCRCRARKR 97
Query: 254 LVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYT 311
+K + IQR P +L+L KRFS + T K+T+ + FP LD+ + S +
Sbjct: 98 CIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFASENTNHA----V 153
Query: 312 YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILV 371
Y+L AVSNH G T + GHYTAYCR TG W+ ++D+ V+P+ + V +++ AY+L
Sbjct: 154 YNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSD----AYLLF 208
Query: 372 YQ 373
Y+
Sbjct: 209 YE 210
>gi|349577136|dbj|GAA22305.1| K7_Doa4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 926
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P R+++ +C R T +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +CKK+ K I RLP LI+ KRF N K + +P
Sbjct: 776 LEVDEQWL---CPHCKKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890
Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
W +DDT PV + A+A AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922
>gi|348525308|ref|XP_003450164.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 510
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 173/408 (42%), Gaps = 95/408 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 210
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG
Sbjct: 211 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGK 270
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+N + + IF G L+S V C C ST + FW++
Sbjct: 271 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 312
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------- 226
SL + PG T FW P+ PGG
Sbjct: 313 SLDL-PGSST-----------------------PFW----PLSPGGDGSTVNGESHLSGS 344
Query: 227 -TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT 279
TL +CL +F E L ++ C C + K +++LP V KRF S+
Sbjct: 345 TTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLR 404
Query: 280 QKVTSPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALY 327
+K+T+ + FP E LDM ++++S R+ +Y Y L AV NH G T
Sbjct: 405 RKITTYVSFPLE-LDMTPFMASSKESRMNGQYQQSVDVLNNDNKYSLFAVVNHQG-TLES 462
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT++ R+ +W+ DD +++ + V +E Y+L Y ++
Sbjct: 463 GHYTSFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 505
>gi|410919595|ref|XP_003973269.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49-like [Takifugu
rubripes]
Length = 670
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 131/464 (28%), Positives = 177/464 (38%), Gaps = 138/464 (29%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED---------------------- 38
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D
Sbjct: 254 LAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFLTLDLCETEELLAKSNHTQGVKGVTG 313
Query: 39 --------------------IPI-----HPDSKSQGQLVDA----------------LVN 57
+P+ P S +LV A L
Sbjct: 314 AVVSNGNTALSGCPLGRIGNLPVGRKESAPPSTQAAELVQAKASRCSTRQQMSLCYELHT 373
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK------- 110
++MWS +++ A+L ++ + F G QQDAQEFL LL + +E
Sbjct: 374 LFRVMWSGRWSLVSPFAMLHSVWNLIPAFRGYDQQDAQEFLCELLDKVQQELDTEGSRRR 433
Query: 111 -VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
V+P SKQV V + IF GQL S V C +CK
Sbjct: 434 IVIP------ITKRKLSKQV----------------LKVLNTIFHGQLLSQVTCLSCKHK 471
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S E FW+LSL P + SV+ S +S+ Y+ TL
Sbjct: 472 SNTVEPFWDLSLEFP---------ERYHSVKGSG---SSSAYQ-----------RSCTLT 508
Query: 230 ECLNKFFNGETLHN---TCQYCKKQ-----------SDLVKLYEIQRLPPVLILWFKRF- 274
E L+KF E L C +C K+ S+ K I RLP VL L KRF
Sbjct: 509 EMLSKFTEMEALEGNIYACNHCNKKRRKSSHKPLVLSEACKQLLIYRLPQVLRLHLKRFR 568
Query: 275 --SSNFTQKVTSPIKFPREGLDMEYYISASGRRVE-SRYTYDLCAVSNHIGKTALYGHYT 331
N +K+ + F + Y + SG V YTYDL AV H GK GHYT
Sbjct: 569 WSGRNHREKIGVHVAFDQVLNIKPYCCTGSGHSVHRGGYTYDLSAVVMHHGKGFGSGHYT 628
Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
AYC G W +D+ + + V + + AYIL Y +R
Sbjct: 629 AYCYNTEGGFWVHCNDSEMKVCSVEEVCNTQ----AYILFYTQR 668
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 165/376 (43%), Gaps = 69/376 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++N++LQ L + LV+ + +W
Sbjct: 160 GLRNLGNTCFMNAILQSLRS------------------------LVEEFRKTLCALWQGS 195
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+ +++ + F G QQQDA EF+ YLL L+ E + +NG + S
Sbjct: 196 QTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE---LQGGFNGVSRSAILQ 252
Query: 127 KQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
++ L K AS V + IF G L++ V C C S ++ F +LSL +P
Sbjct: 253 EK----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPS 308
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT- 244
Q RS KR+ + + PV +L +CL F + E L T
Sbjct: 309 --------QFRS-------KRSKN------QENGPV----CSLRDCLRSFTDLEELDETE 343
Query: 245 ---CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYI 299
C CKK+ K + IQ+LP L L KRF ++ KV + ++FP GLDM+ Y+
Sbjct: 344 LYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYL 403
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
YDL AV H G GHYTAY E GRW+ ++D+ V+ D +TV
Sbjct: 404 LEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFHFNDSTVTVTDEETVG 461
Query: 360 SAEAEHGAYILVYQRR 375
A+ AYIL Y R
Sbjct: 462 KAK----AYILFYVER 473
>gi|432868293|ref|XP_004071466.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Oryzias latipes]
Length = 510
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 172/408 (42%), Gaps = 95/408 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 210
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG
Sbjct: 211 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGK 270
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+N + + IF G L+S V C C ST + FW++
Sbjct: 271 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 312
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------- 226
SL + PG T FW P+ PGG
Sbjct: 313 SLDL-PGSST-----------------------PFW----PLSPGGDSGTVNGEGHLSGS 344
Query: 227 -TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT 279
TL +CL +F E L ++ C C + K +++LP V KRF S+
Sbjct: 345 TTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLR 404
Query: 280 QKVTSPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALY 327
+K+T+ + FP E LDM ++++S R+ +Y Y L AV NH G T
Sbjct: 405 RKITTYVSFPLE-LDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLES 462
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT++ R+ +W+ DD +++ + V +E Y+L Y +
Sbjct: 463 GHYTSFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKH 505
>gi|254585447|ref|XP_002498291.1| ZYRO0G06798p [Zygosaccharomyces rouxii]
gi|238941185|emb|CAR29358.1| ZYRO0G06798p [Zygosaccharomyces rouxii]
Length = 877
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 166/406 (40%), Gaps = 86/406 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CYIN ++QCL T N+ LN I ++ S+G L + M
Sbjct: 516 GLENMGNSCYINCIIQCLLGTHELTNIFLNNSYERHINLNSKLGSKGVLAKHFARLIHQM 575
Query: 63 WSSG-------NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
S N + +A S F + QQD+QEF +LL L+E+ +Q
Sbjct: 576 HQSAAFKKSDKNKAVRPYEFKMACGSINSLFRESGQQDSQEFCQFLLDGLHEDL----NQ 631
Query: 116 YNGSTYSNTSSKQVGSFR--------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
G+ S++ R + WE++ T + SV D+F GQ S +RC C
Sbjct: 632 CGGNPPLKELSEEAEKMRERLSMRIASSIEWERYLTRDFSVIVDLFQGQYASQLRCKVCN 691
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
TST Y+ F L+ PVP +C
Sbjct: 692 HTSTTYQPFSILAAPVP---------------HAKSC----------------------Y 714
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVT 283
L +C +F E L C YCKK+ K I RLP LI+ KRF N K
Sbjct: 715 LLDCFKEFTKLEQLEKDEEWLCPYCKKKQPSTKKLTITRLPRNLIIHLKRF-DNLLNKNN 773
Query: 284 SPIKFPREGLDMEYYISA--SGR-------RVESR-----YTYDLCAVSNHIGKTALY-G 328
+ +P LD+ + + GR + SR + Y L AV++H G +LY G
Sbjct: 774 VLVNYPF-FLDLTPFWANDFDGRLPPGVTDELPSRGQVAPFKYKLYAVASHSG--SLYGG 830
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
HYTAY + WY +DDT P+ T E + AY+L Y R
Sbjct: 831 HYTAYVDKGLNKGWYYFDDTGYRPMRTPT-ECITS--NAYVLFYHR 873
>gi|239977665|sp|A6ZY34.1|UBP4_YEAS7 RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Vacuole biogenesis protein SSV7
gi|151942058|gb|EDN60414.1| ubiquitin isopeptidase [Saccharomyces cerevisiae YJM789]
Length = 926
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P R+++ +C R T +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +CKK+ K I RLP LI+ KRF N K + +P
Sbjct: 776 LEVDEQWL---CPHCKKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890
Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
W +DDT PV + A+A AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922
>gi|366987141|ref|XP_003673337.1| hypothetical protein NCAS_0A03910 [Naumovozyma castellii CBS 4309]
gi|342299200|emb|CCC66949.1| hypothetical protein NCAS_0A03910 [Naumovozyma castellii CBS 4309]
Length = 795
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 167/407 (41%), Gaps = 83/407 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ-GQLVDALVNFMKMMWSS 65
G+ N N+CY+N ++QCL + P + LN H + +S+ G + +F K++
Sbjct: 430 GLENMSNSCYMNCIIQCLLSVPELIQICLNNSFLKHINMESKLGSKGVIMKHFAKLIQDM 489
Query: 66 GNLVLNTKAILL-----------ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD 114
+ + T L A S + + G+QQQD QEF +LL L+E+ +
Sbjct: 490 HSQQVKTGRSLFSYPVKTIDFKNACASVSSIYSGSQQQDCQEFCEFLLDGLHEDL----N 545
Query: 115 QYNGSTYSNTSSKQVGSFR--------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
Q G+ + + Q R + WE F S+ D+F GQ S +RC C
Sbjct: 546 QCGGNPPARELTDQEERLREGLCMRVASSMAWENFLHNNFSLIIDLFAGQYGSQLRCCVC 605
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
+ TST Y+ F LS+PVP S R S C
Sbjct: 606 QYTSTTYQPFTLLSVPVP------------LSSRVSRC---------------------- 631
Query: 227 TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKV 282
++ +C +F E L C CK++ K +I RLP LI+ FKRF N K
Sbjct: 632 SIIDCFQEFTKCERLDKDEEWFCPQCKRKQPSTKQLKITRLPKNLIIHFKRF-DNMMNKN 690
Query: 283 TSPIKFPRE---------------GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALY 327
I++P E L M + G +V + Y L AV+ H+G T
Sbjct: 691 NIFIQYPYELDLTPFWVNDFNGELPLGMTNSLLTKGGQV-GPFKYQLNAVACHMG-TLGS 748
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYTAY + WY +DD+ V + + AY+L Y R
Sbjct: 749 GHYTAYVNKGPDVGWYYFDDSSHRIVK---IATEYMNPDAYLLFYHR 792
>gi|452847186|gb|EME49118.1| hypothetical protein DOTSEDRAFT_67997 [Dothistroma septosporum NZE10]
Length = 1079
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 164/409 (40%), Gaps = 78/409 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDS--KSQGQLVDALVNFMKMM 62
G+ N G+TCY+N+ LQ LS T + L++ + D+ S+G L D N ++ +
Sbjct: 698 GLVNFGSTCYMNATLQALSATTPLSVLFLDDQFKGLVQKDNWKGSRGLLPDIYANTVRSL 757
Query: 63 WSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
W N + T R + D QQQDAQEF ++ L+E+ + +
Sbjct: 758 WKGDVNCIKPTTLFNFVGRLNSMFRDPGQQQDAQEFFSMIVDVLHEDFNAMWARTPLRAL 817
Query: 122 SNTSSKQVGSFRALHY----WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
++ ++ +H W ++ E S + +F GQ S ++
Sbjct: 818 TDQEEQKRERMPKIHVAKTEWGRYTHRENSFLTSLFYGQQSSRLK--------------- 862
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-GGGTLYECLNKFF 236
C C TST Y+ L + +P + +C + F
Sbjct: 863 -----------------------CPQCGLTSTQYDALALLQVEIPDCREAKIQDCFRQHF 899
Query: 237 NGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF----TQKVTSPIKF 288
E L TC CK K + R PP L++ KRF +N +K+ + ++F
Sbjct: 900 KDELLDEDNQWTCPNCKAPRRAWKKLTMTRAPPFLVVGLKRFKTNPRTSDQRKIHTAVRF 959
Query: 289 PREGLDMEYYISASGRRVESR--------------------YTYDLCAVSNHIGKTALYG 328
P +GLDME ++ E++ Y YD AV H+G++ G
Sbjct: 960 PLDGLDMEEFMLPQPSPQEAQAIASTYGAEALKTDMTLTPPYMYDAYAVVRHMGESTRSG 1019
Query: 329 HYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
HYTA R W ++DT D +T+ S+ A AY++ YQRR
Sbjct: 1020 HYTAAVRDRVRNCWRYFNDTSAQDFDPRTLSSSRALDNDQAYLVFYQRR 1068
>gi|207346788|gb|EDZ73182.1| YDR069Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 365
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 162/395 (41%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 2 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 61
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 62 YKEQVDGSKKIPISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 121
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 122 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 181
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P N + T+ + F E + +C N
Sbjct: 182 QPFTVLSIPIPK----------------KNSRNNITIEDCFREFT-----------KCEN 214
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +C+K+ K I RLP LI+ KRF N K + +P
Sbjct: 215 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 270
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 271 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 329
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
W +DDT PV + + AY+L Y R
Sbjct: 330 KGWLYFDDTKYKPVKNK---ADAINSNAYVLFYHR 361
>gi|432868295|ref|XP_004071467.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Oryzias latipes]
Length = 527
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 172/408 (42%), Gaps = 95/408 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 227
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG
Sbjct: 228 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGK 287
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+N + + IF G L+S V C C ST + FW++
Sbjct: 288 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 329
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------- 226
SL + PG T FW P+ PGG
Sbjct: 330 SLDL-PGSST-----------------------PFW----PLSPGGDSGTVNGEGHLSGS 361
Query: 227 -TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT 279
TL +CL +F E L ++ C C + K +++LP V KRF S+
Sbjct: 362 TTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLR 421
Query: 280 QKVTSPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALY 327
+K+T+ + FP E LDM ++++S R+ +Y Y L AV NH G T
Sbjct: 422 RKITTYVSFPLE-LDMTPFMASSKESRMNGQYQQTVEVLNNDNKYSLFAVVNHQG-TLES 479
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT++ R+ +W+ DD +++ + V +E Y+L Y +
Sbjct: 480 GHYTSFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKH 522
>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 170/390 (43%), Gaps = 86/390 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N V+Q L+++P R+ L E P S+ +V + +
Sbjct: 157 GLRGLVNQGNTCFMNVVIQALTHSPVLRDYFLMEKHPRCSPSEISSCIVCEFSQIFQEFF 216
Query: 64 SSGNLVLNT--KAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
S+ N T + +LL R+ ++ G +QQDA EFL+ +L ++E ++ P GS
Sbjct: 217 SNENSNPMTPYRLLLLVWRN-SEYLAGYEQQDAHEFLIAVLDMIHE--RLQPRIEGGSI- 272
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ E S+ +F G ++S+V
Sbjct: 273 -----------------DLTGHAERSIIDQVFTGYMQSNVV------------------- 296
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-GGGTLYECLNKFFNGET 240
C+ C S + ++SL +P +L +CL+KF E
Sbjct: 297 -------------------CNQCGNISQTIDPLRDISLDIPQVPSASLMDCLSKFTKKEQ 337
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT---QKVTSPIKFPREGL 293
L N C+ C K+ + K I RLP V L KRF T KV +P+ FP+ L
Sbjct: 338 LGNASKINCKKCGKRQESSKQLTISRLPVVACLHLKRFEQTATGSRSKVATPVSFPKT-L 396
Query: 294 DMEYYISASGRRV--------ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
DM ++S S R + Y Y+L AV NH+G GHYT++ R+ T W+
Sbjct: 397 DMGPFMS-SARNTSLSPEFCDSAHYKYELFAVVNHMGNLQ-SGHYTSFIRQ--TSSWFRC 452
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD++++ + V ++E AY+L Y ++
Sbjct: 453 DDSLITKASIEQVLNSE----AYLLFYHKK 478
>gi|123497928|ref|XP_001327289.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121910216|gb|EAY15066.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 583
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 167/379 (44%), Gaps = 70/379 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVN-FMKM 61
G N GNTCY N+ LQCL + +++L+ I S G++ A + M +
Sbjct: 264 GFVNLGNTCYFNASLQCLFHIQRLTDIILSPSFLSRINTTNKKGSGGRVAMAYRSTLMSL 323
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+ VL I A S +K+ N + DAQE +L +L AL+E+ +++ G
Sbjct: 324 CNAKDYSVLTPTDIRAAFTSRFRKYANNNEHDAQEAMLDMLDALHEDT----NEHAGLEI 379
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ +W+ + S D+F G+L SS+ C +C + +V+E F LS+
Sbjct: 380 PKNLTD---------HWQIHLSQNNSPIVDLFHGELVSSIHCPSCGKDESVHEPFTFLSV 430
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
P+ Q+ SSV +L EC+N+F + L
Sbjct: 431 PI--------RSQIFSSV---------------------------SLEECINEFAERDVL 455
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
+ C +CK+ + VK + R P +L++ KRF+ +T+ I +P + LDM
Sbjct: 456 DASNKWECPFCKEHVEAVKELAVFRCPSILLIQLKRFNPVTKAAITTNITYP-DTLDMRG 514
Query: 298 YISASGRRVESRYTYDLC-AVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
++ + L AV H K+ HYT+ C +WY +DD +V +D
Sbjct: 515 FVKGPDPG-----NFKLIGAVFYH--KSVFMEHYTSACLSMANNKWYSFDDNIVKEID-- 565
Query: 357 TVESAEAEHGAYILVYQRR 375
+++ + AYIL+YQ+R
Sbjct: 566 --QTSAHQGNAYILIYQKR 582
>gi|328773644|gb|EGF83681.1| hypothetical protein BATDEDRAFT_86065 [Batrachochytrium
dendrobatidis JAM81]
Length = 332
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 167/384 (43%), Gaps = 83/384 (21%)
Query: 17 INSVLQCLSNTPAFRNVLLNEDIPIHPD--SKSQGQLVDALVNFMK---MMWSSGN---- 67
+NS+LQCL + F + H + S ++G + F+K + S+G
Sbjct: 1 MNSILQCLFSIGKFMAYFESGQYLSHFNLQSSTKGLIAKTFGEFVKNINHVDSAGRGKIA 60
Query: 68 --LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE---AKVVPDQYNGSTYS 122
L+L + LLA +F G Q D+QEFL +LL L+E+ + Y Y
Sbjct: 61 SPLLLKRQIELLA-----PQFSGYNQHDSQEFLRFLLDGLHEDVNTGRPTKFSYTDEQYD 115
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
+++Q + + W +++ S DIF GQL+
Sbjct: 116 QLTTRQ----KTIVSWNRYKKFNNSPICDIFSGQLQ------------------------ 147
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLP-------VPPGGGTLYECLNKF 235
S+V C C+ TST ++ FW++S P + G TL +CL+ F
Sbjct: 148 --------------STVTCLECQTTSTTFDTFWDISAPLISSNLQIDQDGVTLDQCLDSF 193
Query: 236 FNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF-----SSNFTQKVTSPIKFP 289
F E L C CK + +K I RLP VL++ KRF + ++K+ + + FP
Sbjct: 194 FEAEKLDTYRCGKCKCDTLAIKQLGISRLPSVLVIHLKRFQVLPLTDIPSRKLHTMVTFP 253
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
M Y S + YDL AVSNH G+ GHYT++ R TG W+L+ D++
Sbjct: 254 IHQFTMNAYTSEL-----TSAEYDLVAVSNHSGELH-GGHYTSHTRNTDTGHWHLWSDSI 307
Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
S + +E ++ AY+L YQ
Sbjct: 308 GSQCN--DLEFGQSR-DAYVLFYQ 328
>gi|405966260|gb|EKC31567.1| Ubiquitin carboxyl-terminal hydrolase 20 [Crassostrea gigas]
Length = 914
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 124/243 (51%), Gaps = 26/243 (10%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP--------GGGTLYECQLRSS 198
SV SDIF G++ SSV+C C+R ST E F +LSLP+P G T L
Sbjct: 376 SVISDIFDGKILSSVQCLTCERISTTKETFQDLSLPIPTKDHLHMLHGHNT---SALTKV 432
Query: 199 VRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDL 254
C K+ + W + + P TL +CL FF+ + L +C+ CKK +
Sbjct: 433 GACGEAKQGWFSWMFGWMRNWFIGP-TITLQDCLAAFFSADELKGDNMYSCEKCKKLRNG 491
Query: 255 VKLYEIQRLPPVLILWFKRFSSNF-TQKVTSPIKFPREGLDMEYYISASGRRVESRYT-Y 312
+K + LP +L + KRF F + K++S + FP + LDM+ Y+ R S+ T +
Sbjct: 492 LKFSRVLELPEILCIHLKRFRHEFYSSKISSYVSFPLDSLDMKKYLH---RDCSSQVTVF 548
Query: 313 DLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
DL AV H G TA GHYTAYC +WY +DD V+ V+ V + E AY+L Y
Sbjct: 549 DLHAVICHHG-TAGGGHYTAYCLNYLNDQWYEFDDQYVTEVEVGQVINCE----AYVLFY 603
Query: 373 QRR 375
++R
Sbjct: 604 RKR 606
>gi|449508398|ref|XP_002189650.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Taeniopygia guttata]
Length = 911
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 125/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSS-VRCSN 203
SV SDIF G + SSV+C C R S E F +LSLP+P L+ ++S V+ +
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRLSVTLETFQDLSLPIPGKEDLAKLHSASHQTSLVKAGS 501
Query: 204 C-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
C KR S V FW PV TL +CL FF + L
Sbjct: 502 CGEAYAPQGWIAFFMEYFKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGD 554
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD++ +
Sbjct: 555 NMYSCGRCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPF 614
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYCR WY +DD V+ V TV
Sbjct: 615 LAKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTV 671
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 672 QNAE----AYVLFYRK 683
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P + L+ D K + + + M +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLARTDKKP--AICKSYLKLMTELW 208
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 HKSRPGSVV--PTGLFQGIKTVNPMFRGYSQQDAQEFLRCLMDLLHEELK 256
>gi|281312481|sp|A5PMR2.1|UBP33_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
Length = 897
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 127/258 (49%), Gaps = 40/258 (15%)
Query: 140 KFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS- 198
K Q S+ S++F G + SSV+C C R S E F ++SLP+P G +L SS
Sbjct: 429 KRQRKYHSIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIP---GKEDLAKLHSSS 485
Query: 199 -----VRCSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
V+ +C + FW PV TL +CL FF + L
Sbjct: 486 HQTALVKAGSCGEAYAPQGWIAFVMEYIKSWFWG---PV----VTLQDCLAAFFARDELK 538
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
+C+ CKK + VK ++Q LP +L + KRF F+ K+ + + FP EGL+M+
Sbjct: 539 GDNMYSCEKCKKLRNGVKFCKVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQ 598
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+++ + + TYDL +V H G TA GHY AYCR E WY +DD V+ V
Sbjct: 599 PFLAKDSSALTT--TYDLLSVICHHG-TASSGHYIAYCRNELNQLWYEFDDQSVTEVSES 655
Query: 357 TVESAEAEHGAYILVYQR 374
V++AE AY+L Y++
Sbjct: 656 CVQNAE----AYVLFYKK 669
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L + D K L + + +W
Sbjct: 154 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKP--ALCKSYQKLITDLW 211
Query: 64 SSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQYNGS 119
N + + +++ F G QQD+QEFL L+ L+EE K + P+ N +
Sbjct: 212 HKNRNAYVVPTNLFQGIKAVNPMFRGYSQQDSQEFLRCLMDQLHEELKELIPEPEDPNQA 271
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSD 151
+ S + ++ + FQ+ E+ SD
Sbjct: 272 VAMDDSPDEDNHSQS----DDFQSCESCGSSD 299
>gi|403215445|emb|CCK69944.1| hypothetical protein KNAG_0D01930 [Kazachstania naganishii CBS
8797]
Length = 986
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 171/405 (42%), Gaps = 82/405 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK--SQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QCL + L+ ++ +SK S+G L + M
Sbjct: 621 GLENMGNSCYLNCIIQCLLGNNELIKIFLDNSFEKYVNLNSKLGSKGVLARYFSRLIHTM 680
Query: 63 WSSGNLV--------LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD 114
+++ + + +A S F G QQD QEF +LL L+E+ +
Sbjct: 681 YNNARTIKHGGKHAPVKPAQFKMACGSVNSAFKGGSQQDCQEFCQFLLDGLHEDL----N 736
Query: 115 QYNGSTYSNTSSKQVGSFR--------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
Q G+ +++ + R + WE+F TT+ SV D+F GQ S ++C C
Sbjct: 737 QCGGNKRLAELTEEAENLREKLSLRIASSIEWERFLTTDFSVIGDLFQGQYASRLQCKTC 796
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
+TST Y+ F LS+PVP S S C
Sbjct: 797 GKTSTTYQPFSVLSIPVP-------------SKHISKC---------------------- 821
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKV 282
++ +C ++F E L +C CK + K I RLP LI+ KRF N K
Sbjct: 822 SIIDCFDEFTKVENLEVDEQWSCPRCKSKQPSTKKLTITRLPRNLIIHLKRF-DNRLNKN 880
Query: 283 TSPIKFP---------REGLDMEYYISAS---GRRVESRYTYDLCAVSNHIGKTALY-GH 329
+++P D + ++ S R + + Y L V+ H G +LY GH
Sbjct: 881 NILVQYPFTLDLTTFWANDFDGKLPLNVSELPTRGQKPPFNYKLYGVACHFG--SLYGGH 938
Query: 330 YTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
YTAY + WY +DDT P+ ++E + AY+L Y+R
Sbjct: 939 YTAYVDKGIKNGWYYFDDTSCRPI-KNSMEPITS--SAYVLFYKR 980
>gi|50308817|ref|XP_454413.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74624748|sp|Q9HFS7.1|UBP4_KLULA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|10444512|gb|AAG17929.1|AF303215_1 deubiquitinating enzyme [Kluyveromyces lactis]
gi|49643548|emb|CAG99500.1| KLLA0E10275p [Kluyveromyces lactis]
Length = 796
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 167/411 (40%), Gaps = 93/411 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QCL + L H + S +G L + ++ M
Sbjct: 433 GLVNLGNSCYLNCIIQCLLGCHELSYIFLTNSYRKHVNVNSRLGSKGLLANYFSQLVQKM 492
Query: 63 WSSGNL-----------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE--- 108
+ G L ++ LA S F G QQQD QEF +LL L+E+
Sbjct: 493 YQQGKLQAYNNTNMESTAVHPTQFKLACGSINSLFKGKQQQDCQEFCQFLLDGLHEDLNQ 552
Query: 109 -------AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSV 161
++ P+ T ++ S A+ WE++ TT+ SV D+F GQ S +
Sbjct: 553 CGTNPPLKELSPE---AEKMRETMPMRIAS--AIE-WERYLTTDFSVIVDLFQGQYASQL 606
Query: 162 RCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPV 221
RC C TST Y+ F LS+PVP R +C
Sbjct: 607 RCKICAHTSTTYQAFSVLSVPVP---------------RARSC----------------- 634
Query: 222 PPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN 277
T+Y+C +F ETL C YCK++ K I RLP LI+ KRF N
Sbjct: 635 -----TIYDCFKEFTKLETLEKDELWYCPYCKQRQPSTKQIIITRLPNNLIIHLKRF-DN 688
Query: 278 FTQKVTSPIKFPREGLDMEYY--------------ISASGRRVESRYTYDLCAVSNHIGK 323
K + +P E LD+ + +S R + + Y L AV++H G
Sbjct: 689 MMNKNNVFVNYPNE-LDLTGFWIDDYNGEMPKDNGVSLPLRGQKPPFNYRLFAVASHSG- 746
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
T GHYT++ + G W +DD + + AY+L Y+R
Sbjct: 747 TLYGGHYTSFVDKGRVG-WCSFDDVSWRKIRRK---DEYITPNAYVLFYRR 793
>gi|326925187|ref|XP_003208801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Meleagris
gallopavo]
Length = 910
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 125/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSS-VRCSN 203
SV SDIF G + SSV+C C R S E F +LSLP+P L+ ++S V+ +
Sbjct: 441 SVISDIFDGTIVSSVQCLTCDRLSVTLETFQDLSLPIPGKEDLAKLHSASHQTSLVKTGS 500
Query: 204 C-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
C KR S V FW PV TL +CL FF + L
Sbjct: 501 CGEAYAPQGWIAFFMEYFKRFVVSCVPSWFWG---PVV----TLQDCLAAFFARDELKGD 553
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD++ +
Sbjct: 554 NMYSCGRCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPF 613
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYCR WY +DD V+ V TV
Sbjct: 614 LAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTV 670
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 671 QNAE----AYVLFYRK 682
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P + L+ D K + + + M +W
Sbjct: 150 GLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLARTDKKP--AICKSYLKLMTELW 207
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + ++S F G QQDAQEFL L+ L+EE K
Sbjct: 208 HKNRPGSVV--PTGLFQGIKSVNPTFRGYSQQDAQEFLRCLMDLLHEELK 255
>gi|47086035|ref|NP_998392.1| ubiquitin carboxyl-terminal hydrolase 33 [Danio rerio]
gi|46362501|gb|AAH66557.1| Ubiquitin specific peptidase 33 [Danio rerio]
Length = 897
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 127/258 (49%), Gaps = 40/258 (15%)
Query: 140 KFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS- 198
K Q S+ S++F G + SSV+C C R S E F ++SLP+P G +L SS
Sbjct: 429 KRQRKYHSIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIP---GKEDLAKLHSSS 485
Query: 199 -----VRCSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
V+ +C + FW PV TL +CL FF + L
Sbjct: 486 HQTALVKAGSCGEAYAPQGWIAFVMEYIKSWFWG---PV----VTLQDCLAAFFARDELK 538
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
+C+ CKK + VK ++Q LP +L + KRF F+ K+ + + FP EGL+M+
Sbjct: 539 GDNMYSCEKCKKLRNGVKFCKVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQ 598
Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
+++ + + TYDL +V H G TA GHY AYCR E WY +DD V+ V
Sbjct: 599 PFLAKDSSALTT--TYDLLSVICHHG-TASSGHYIAYCRNELNQLWYEFDDQSVTEVSES 655
Query: 357 TVESAEAEHGAYILVYQR 374
V++AE AY+L Y++
Sbjct: 656 CVQNAE----AYVLFYKK 669
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P L + D K L + + +W
Sbjct: 154 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKP--ALCKSYQKLVTDLW 211
Query: 64 SSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQYNGS 119
N + + +++ F G QQD+QEFL L+ L+EE K + P+ N +
Sbjct: 212 HKNRNSYVVPTNLFQGIKAVNPMFRGYSQQDSQEFLRCLMDQLHEELKELIPEPEDPNQA 271
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSD 151
+ S + ++ + FQ+ E+ SD
Sbjct: 272 VAMDDSPDEDNHSQS----DDFQSCESCGSSD 299
>gi|312068520|ref|XP_003137252.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 783
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 195/476 (40%), Gaps = 110/476 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-----PDSKSQGQLVDALVNF 58
GL G+ N GNTCY+N+ +Q LSN P F + + D D+ + + +
Sbjct: 14 GLTGLTNLGNTCYMNAAIQALSNCPPFSDFFRSVDSVASFASKILDNNGEPPVSRSFRCL 73
Query: 59 MKMMWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQ 115
++ +WS + +N + L +R +F G QQDAQEF+ LL L+ E + V +
Sbjct: 74 LRSLWSEERSRCINPQLFLAQVRHQYPQFRGLAQQDAQEFIRCLLDVLHRELRQPVFAWE 133
Query: 116 YNGSTY---SNTSSKQVGSFRALHY------------WEKFQTTEASVFSDIFV------ 154
Y T+ + T + + F Y E+++T ++ SD V
Sbjct: 134 YRNITHTCNTQTEEESISGFIRSRYVPSRSSSSASDDDERYETADSGWSSDGEVAAASKA 193
Query: 155 ----GQLRSSVRCS------NCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCS 202
G + S R N + + + + P+ +++ +L S V+C
Sbjct: 194 SKHAGPISSDRRTHIPDHSVNQQESEETDQRNKQSRSPIYYRSLVTEVFDGRLSSVVKCL 253
Query: 203 NCKRTSTVYEIFWELSLPVPPG-------------------------------------- 224
C S YE F +LSL +P
Sbjct: 254 TCHHLSETYETFQDLSLSIPTREQLGHIASYSMNLNSENKKNNKEQEEVDSSGNSFWQWP 313
Query: 225 ---GGTLY---------------ECLNKFF-----NGETLHNTCQYCKKQSDLVKLYEIQ 261
GG+L+ + L FF GE ++ +C+ C K + VK+ +I
Sbjct: 314 SWLGGSLFRSVYHYLFGDLVSLNDALAAFFLPDDLCGENMY-SCEKCAKLRNGVKICKII 372
Query: 262 RLPPVLILWFKRFSS--NFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSN 319
P +L + KRF +++ K+ + + FP LD+ +I AS + + YDL A
Sbjct: 373 DPPEILCIHLKRFRHELSYSVKIRNKVTFPVHDLDLTPFI-ASFEKNKEPVLYDLVAFIT 431
Query: 320 HIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
H G A GHY AYC+ E WY +DDT+V+ ++ + S E AY+L YQR+
Sbjct: 432 HYGANAESGHYVAYCKNEMDDNWYEFDDTMVTRLEIADILSKE----AYVLFYQRQ 483
>gi|393911690|gb|EFO26812.2| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 855
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 195/476 (40%), Gaps = 110/476 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-----PDSKSQGQLVDALVNF 58
GL G+ N GNTCY+N+ +Q LSN P F + + D D+ + + +
Sbjct: 127 GLTGLTNLGNTCYMNAAIQALSNCPPFSDFFRSVDSVASFASKILDNNGEPPVSRSFRCL 186
Query: 59 MKMMWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQ 115
++ +WS + +N + L +R +F G QQDAQEF+ LL L+ E + V +
Sbjct: 187 LRSLWSEERSRCINPQLFLAQVRHQYPQFRGLAQQDAQEFIRCLLDVLHRELRQPVFAWE 246
Query: 116 YNGSTY---SNTSSKQVGSFRALHY------------WEKFQTTEASVFSDIFV------ 154
Y T+ + T + + F Y E+++T ++ SD V
Sbjct: 247 YRNITHTCNTQTEEESISGFIRSRYVPSRSSSSASDDDERYETADSGWSSDGEVAAASKA 306
Query: 155 ----GQLRSSVRCS------NCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCS 202
G + S R N + + + + P+ +++ +L S V+C
Sbjct: 307 SKHAGPISSDRRTHIPDHSVNQQESEETDQRNKQSRSPIYYRSLVTEVFDGRLSSVVKCL 366
Query: 203 NCKRTSTVYEIFWELSLPVPPG-------------------------------------- 224
C S YE F +LSL +P
Sbjct: 367 TCHHLSETYETFQDLSLSIPTREQLGHIASYSMNLNSENKKNNKEQEEVDSSGNSFWQWP 426
Query: 225 ---GGTLY---------------ECLNKFF-----NGETLHNTCQYCKKQSDLVKLYEIQ 261
GG+L+ + L FF GE ++ +C+ C K + VK+ +I
Sbjct: 427 SWLGGSLFRSVYHYLFGDLVSLNDALAAFFLPDDLCGENMY-SCEKCAKLRNGVKICKII 485
Query: 262 RLPPVLILWFKRFSS--NFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSN 319
P +L + KRF +++ K+ + + FP LD+ +I AS + + YDL A
Sbjct: 486 DPPEILCIHLKRFRHELSYSVKIRNKVTFPVHDLDLTPFI-ASFEKNKEPVLYDLVAFIT 544
Query: 320 HIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
H G A GHY AYC+ E WY +DDT+V+ ++ + S E AY+L YQR+
Sbjct: 545 HYGANAESGHYVAYCKNEMDDNWYEFDDTMVTRLEIADILSKE----AYVLFYQRQ 596
>gi|41053756|ref|NP_956551.1| ubiquitin carboxyl-terminal hydrolase 44 [Danio rerio]
gi|82188491|sp|Q7ZUM8.1|UBP44_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 44; AltName:
Full=Deubiquitinating enzyme 44; AltName: Full=Ubiquitin
thioesterase 44; AltName:
Full=Ubiquitin-specific-processing protease 44
gi|28856210|gb|AAH48060.1| Zgc:55661 [Danio rerio]
gi|182891180|gb|AAI64039.1| Zgc:55661 protein [Danio rerio]
Length = 695
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 170/443 (38%), Gaps = 116/443 (26%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP-------------------- 40
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D+
Sbjct: 290 VTPGVTGLRNLGNTCYMNSILQVLSHLHVFRECFLRLDLNQALELLASAVSRKLGLSAQR 349
Query: 41 -IHPDSKSQGQ--------------------------LVDALVNFMKMMWSSGNLVLNTK 73
I P +QG L L +MWS +++
Sbjct: 350 VIQPKGLNQGSGLSGGASRSRNMELIQPKEPSSKHISLCHELHTLFPVMWSGKWALVSPF 409
Query: 74 AILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS--KQVGS 131
A+L ++ F G QQDAQEFL LL + E + + +N KQV
Sbjct: 410 AMLHSVWQLIPAFRGYAQQDAQEFLCELLDKVQHELERTRTLTPATVPANQRRLIKQV-- 467
Query: 132 FRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 191
SV + IF GQL S VRC C S E FW+LSL P Y
Sbjct: 468 --------------LSVVNTIFHGQLLSQVRCLACDHRSNTIEPFWDLSLEFP----ERY 509
Query: 192 ECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN---TCQYC 248
SN K + V P G L E L KF E L C YC
Sbjct: 510 H---------SNSKDAAQV------------PCG--LTEMLAKFTETEALEGAIYACDYC 546
Query: 249 KKQ-----SDLVKLYEIQ------RLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLD 294
+ S V L E Q +LP VL L KRF N +K+ ++F +E L+
Sbjct: 547 NNKRRRFCSKQVVLTEAQKQLMVHKLPHVLRLHLKRFRWSGRNHREKIGVHVQFEQE-LN 605
Query: 295 MEYYISASGRRV--ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
ME Y + + Y L AV H GK GHYTA+C G W +D+ +S
Sbjct: 606 MEPYCCKDSGNLPHPQHFLYQLSAVVMHHGKGFGSGHYTAFCYNTEGGFWVHCNDSKLSV 665
Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
+ V A+ AYIL Y +R
Sbjct: 666 CAVEEVCKAQ----AYILFYTQR 684
>gi|354548287|emb|CCE45023.1| hypothetical protein CPAR2_700270 [Candida parapsilosis]
Length = 793
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 178/421 (42%), Gaps = 90/421 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPA-----FRNVLLN----EDIPIHPDSKSQGQLVDALVN 57
G+ N GN+CY+N ++QCL+ TP F +V N + I ++ +QG+L V
Sbjct: 409 GLFNLGNSCYMNCMIQCLAATPQLTSFFFPSVTTNGSYKQHINVNNKLGTQGKLTMGFVE 468
Query: 58 FMKMMWSS-GNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP-- 113
+ M ++ G +K +A S ++F QQD EF+ +LL L+E+ +P
Sbjct: 469 LLLNMLNNNGKAFSPSKFKKIAGECSPGRQFASCSQQDCTEFVTFLLDGLHEDLNQMPVL 528
Query: 114 DQYNGSTYSNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
D + + +Q + L WE++ S+ D F GQ S +RC C
Sbjct: 529 DPKEKKRITELTPEQERNREILPVRLASTIEWERYLKLNFSIIVDNFQGQYLSQLRCLEC 588
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
TST Y F LSLP+P ++S V
Sbjct: 589 GTTSTTYNAFSLLSLPIP-----------------EKLNQSSKV---------------- 615
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--- 279
TL++C+ +F E L + C +CK+ + K I RLP VLI+ FKRF N
Sbjct: 616 TLHDCIEEFTKTELLDDGNKWHCSHCKRFTKSTKRIAITRLPQVLIVNFKRFKVNNNGQI 675
Query: 280 QKVTSPIKFP-REGLDMEYYISASG-------------------------RRVESRYTYD 313
+K+ + + +P E LD+ Y + G R E + Y
Sbjct: 676 RKLETFVTYPVSETLDLTKYWTKRGTTMGDSGSPKMSLEEETTILESFPVRNQEPPFRYQ 735
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
+ V+NH G T GHYT+Y + G RW +DD+ ++ AQT A+ L +Q
Sbjct: 736 IYGVANHFG-TLSTGHYTSYVYKSGKKRWCYFDDSKITTNVAQT---EVMNKNAFCLFFQ 791
Query: 374 R 374
R
Sbjct: 792 R 792
>gi|449508402|ref|XP_004176928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2
[Taeniopygia guttata]
Length = 903
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 122/251 (48%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + SSV+C C R S E F +LSLP+P G +L S+ ++ +
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRLSVTLETFQDLSLPIP---GKEDLAKLHSASHQTSLVK 498
Query: 207 TSTVYEI-----------------FWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
+ E FW PV TL +CL FF + L +C
Sbjct: 499 AGSCGEAYAPQGWIAFFMEYFKSWFWG---PV----VTLQDCLAAFFARDELKGDNMYSC 551
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD++ +++
Sbjct: 552 GRCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDS 611
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 612 PA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE- 667
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 668 ---AYVLFYRK 675
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P + L+ D K + + + M +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLARTDKKP--AICKSYLKLMTELW 208
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 HKSRPGSVV--PTGLFQGIKTVNPMFRGYSQQDAQEFLRCLMDLLHEELK 256
>gi|430811472|emb|CCJ31113.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 1230
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 163/393 (41%), Gaps = 82/393 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAF----RNV----------LLNEDIPIHPDSKS-- 47
G G+ N GNTCY+N+++QCLSNT F R + LL+ H + +
Sbjct: 595 GTTGLTNLGNTCYMNAIIQCLSNTIPFARYYRGIFFIAFLFLTHLLDGSYKKHINFDNPL 654
Query: 48 --QGQLVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL 105
+G+L + +W + + ++ + ++F N QQD+QEFL +LL L
Sbjct: 655 GYKGELAQTFAQLISYLWDNEHTYVSPLFFKNVIGRLKEQFRNNDQQDSQEFLAFLLDGL 714
Query: 106 NEEAKVVPDQYNGSTYSNTSSKQVGSF----RALHYWEKFQTTEASVFSDIFVGQLRSSV 161
+EE + + ++ S + W+++ S+ +F GQL+S +
Sbjct: 715 HEELNTAAGRLKPRELTVEEKLKIESMPDQIASNIEWQRYTHLNNSIVVSLFQGQLQSRL 774
Query: 162 RCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPV 221
+C C ST Y F LSLP+P Q ++S
Sbjct: 775 KCLTCSFQSTTYNPFTYLSLPIPF-------TQAKTS----------------------- 804
Query: 222 PPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS- 276
TLYECL F E L + C CKK D K I ++P +L++ KRF +
Sbjct: 805 -----TLYECLQFFVQKEYLKDKEQWYCSKCKKPRDATKTLTISKIPEILLIHLKRFRTC 859
Query: 277 -NFTQKVTSPIKFPREGLDMEYYISASGRRVES----RYTYDLCAVSNHIGK-------- 323
++ K+ + + F LD+ ++ S +S +Y Y L AV+NH G
Sbjct: 860 GHWKDKIDTKVDFLINNLDLTDFLLKSELFTDSSNHEKYLYHLYAVTNHYGNLDGGHCKK 919
Query: 324 ------TALYGHYTAYCRREGTGRWYLYDDTVV 350
+ L+ TA + T W L+DD V
Sbjct: 920 TFLILLSYLFAD-TAVIKNGFTNSWNLFDDRRV 951
>gi|449275838|gb|EMC84595.1| Ubiquitin carboxyl-terminal hydrolase 33 [Columba livia]
Length = 911
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 125/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSS-VRCSN 203
SV SDIF G + SSV+C C R S E F +LSLP+P L+ ++S V+ +
Sbjct: 442 SVISDIFDGTIISSVQCLTCDRLSVTLETFQDLSLPIPGKEDLAKLHSASHQTSLVKAGS 501
Query: 204 C-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
C KR S V FW PV TL +CL FF + L
Sbjct: 502 CGEAYAPQGWIAFFMEYFKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGD 554
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD++ +
Sbjct: 555 NMYSCGRCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPF 614
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYCR WY +DD V+ V TV
Sbjct: 615 LAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSETTV 671
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 672 QNAE----AYVLFYRK 683
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P + L+ D K + + + M +W
Sbjct: 151 GLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLARTDKKP--AICKSYLKLMTELW 208
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + +++ F G QQDAQEFL L+ L+EE K
Sbjct: 209 HKSRPGSVV--PTGLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 256
>gi|118094484|ref|XP_422389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Gallus gallus]
Length = 910
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 125/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSS-VRCSN 203
SV SDIF G + SSV+C C R S E F +LSLP+P L+ ++S V+ +
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRLSVTLETFQDLSLPIPGKEDLAKLHSASHQTSLVKTGS 500
Query: 204 C-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
C KR S V FW PV TL +CL FF + L
Sbjct: 501 CGEAYAPQGWIAFFMEYFKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGD 553
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD++ +
Sbjct: 554 NMYSCGRCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPF 613
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYCR WY +DD V+ V TV
Sbjct: 614 LAKDSP--AQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTV 670
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 671 QNAE----AYVLFYRK 682
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P + L+ D K + + + M +W
Sbjct: 150 GLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLARTDKKP--AICKSYLKLMTELW 207
Query: 64 SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
G++V + ++S F G QQDAQEFL L+ L+EE K
Sbjct: 208 HKNRPGSVV--PTGLFQGIKSVNPTFRGYSQQDAQEFLRCLMDLLHEELK 255
>gi|363740497|ref|XP_415470.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Gallus gallus]
Length = 892
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 124/251 (49%), Gaps = 40/251 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ + +
Sbjct: 429 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSAIYQTVPAK 485
Query: 207 TST-----------------VYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TC 245
T + FW PV TL +CL FF + L +C
Sbjct: 486 TGACGDNYASQGWIAFIMEYIRSWFWG---PVV----TLEDCLAAFFAADELKGDNMYSC 538
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASG 303
+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +++
Sbjct: 539 ERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKEC 598
Query: 304 RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA 363
V TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V++AE
Sbjct: 599 --VSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE- 654
Query: 364 EHGAYILVYQR 374
AY+L Y++
Sbjct: 655 ---AYVLFYRK 662
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 137 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 194
Query: 64 SSGNLVLNTKAIL-LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ L ++ F G QQD QEFL L+ L+EE K
Sbjct: 195 HKKRPSYVVPSSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 242
>gi|302308584|ref|NP_985554.2| AFR007Wp [Ashbya gossypii ATCC 10895]
gi|442570061|sp|Q754R5.2|UBP4_ASHGO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|299790700|gb|AAS53378.2| AFR007Wp [Ashbya gossypii ATCC 10895]
gi|374108783|gb|AEY97689.1| FAFR007Wp [Ashbya gossypii FDAG1]
Length = 852
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 168/409 (41%), Gaps = 90/409 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY++ ++QCL T + LN I ++ S+G L + M
Sbjct: 489 GLVNCGNSCYMSCIIQCLLGTQELCTMFLNNSYQNHINLNSRLGSKGLLARYFSQLIHQM 548
Query: 63 WSSGNLVL----NTKAILL------ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV 112
+ G + N K ++ A S F N QQD QEF +LL L+E+
Sbjct: 549 YQYGKDIRKKMGNEKTAVIPTQFKIACGSINSSFKDNTQQDCQEFCQFLLDGLHEDL--- 605
Query: 113 PDQYNGSTYSNTSSKQVGSFRALH--------YWEKFQTTEASVFSDIFVGQLRSSVRCS 164
+Q + S++ R + WE++ TT+ SV D+F GQ S ++C
Sbjct: 606 -NQCGNNPPLKELSEEAEKMREMMPMRLASAIEWERYLTTDFSVIVDLFQGQYASQLQCK 664
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
C+RTST Y+ F LS+PVP S+ C
Sbjct: 665 VCQRTSTTYQPFSVLSVPVP------------STRTC----------------------- 689
Query: 225 GGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ 280
TL +C +F ETL +C CKK+ K I RLP LI+ KRF N
Sbjct: 690 --TLTDCFTEFTKIETLEQEEQWSCPSCKKRQPSTKKITITRLPRNLIIHLKRF-DNMLN 746
Query: 281 KVTSPIKFPREGLDM------EYYISASGRRVE--SR-----YTYDLCAVSNHIGKTALY 327
K + +P LD+ +Y + VE SR + Y L ++ H G T
Sbjct: 747 KNNVFVSYP-SVLDLTAFWANDYDKKVTNNNVELPSRGQVPPFNYQLYGIACHDG-TLRA 804
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQR 374
GHYTAY + W YDDT + + + SA AY+L Y R
Sbjct: 805 GHYTAYVNKGAVLGWCYYDDT-----NWRQIRSAREYITQNAYVLFYHR 848
>gi|344298090|ref|XP_003420727.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Loxodonta
africana]
Length = 592
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 241 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSC-LVCEMSSLFQEFY 299
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 300 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 356
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 357 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 398
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 399 PGSSTPFWPLSPGSEGSMVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 444
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 445 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 503
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 504 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 561
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 562 DDAIITKASIKDVLDSE----GYLLFYHKQ 587
>gi|348502347|ref|XP_003438729.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 506
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 172/408 (42%), Gaps = 99/408 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 210
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG
Sbjct: 211 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK----DDNGK 266
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+N + + IF G L+S V C C ST + FW++
Sbjct: 267 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPFWDI 308
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------- 226
SL + PG T FW P+ PGG
Sbjct: 309 SLDL-PGSST-----------------------PFW----PLSPGGDGSALNGESHTTGA 340
Query: 227 -TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT 279
TL +CL +F E L ++ C C + K +++LP V KRF S+
Sbjct: 341 TTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLR 400
Query: 280 QKVTSPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALY 327
+K+T+ + FP E LDM ++++S R+ +Y Y L AV NH G T
Sbjct: 401 RKITTYVSFPLE-LDMTPFMASSKESRMNGQYQQTVDPFNNDNKYSLFAVVNHQG-TLES 458
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT + R+ +W+ DD +++ + V +E Y+L Y ++
Sbjct: 459 GHYTTFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 501
>gi|706835|emb|CAA58985.1| deubiquinating enzyme [Saccharomyces cerevisiae]
Length = 891
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 528 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 587
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 588 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 647
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 648 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 707
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P R+++ +C R T +C N
Sbjct: 708 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 740
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +C+K+ K I RLP LI+ KRF N K + +P
Sbjct: 741 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 796
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 797 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 855
Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
W +DDT PV + A+A AY+L Y R
Sbjct: 856 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 887
>gi|126297738|ref|XP_001364410.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Monodelphis
domestica]
Length = 908
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 125/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 437 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQSVPAKPGA 496
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S + FW PV TL +CL FF + L
Sbjct: 497 CGDSYTSQGWIAFIMEYIRRFVVSCIPSWFWG---PVV----TLEDCLAAFFAADELKGD 549
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD++ +
Sbjct: 550 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLQPF 609
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ V TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 610 LAKEC--VSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 666
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 667 QNAE----AYVLFYRK 678
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGLKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|291290970|ref|NP_987090.2| inactive ubiquitin carboxyl-terminal hydrolase 50 [Homo sapiens]
Length = 334
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 156/339 (46%), Gaps = 51/339 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCL-SNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ G+ N GNTC +N++ QCL S P L + I + S+ + A M M
Sbjct: 42 GVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQNDCSE--VATAFAYLMTDM 99
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
W + ++ + AL + F QQDAQEFL+ +L L+E K +Y+ YS
Sbjct: 100 WLGDSDCVSPEIFWSALGNLYPAFTKKMQQDAQEFLICVLNELHEALK----KYH---YS 152
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
S + GS + K+ TTE S+ + +F QL S+ C C++ + E+F SLP
Sbjct: 153 RRRSYEKGSTQRC--CRKWITTETSIITQLFEEQLNYSIVCLKCEKCTYKNEVFTVFSLP 210
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+P + YEC LR ++C F + +L +N E +H
Sbjct: 211 IP----SKYECSLRDCLQC-----------FFQQDALT---------------WNNE-IH 239
Query: 243 NTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDMEYYIS 300
C +C+ + + I + P ++I KRF T +K+ + I +P LD+ YI
Sbjct: 240 --CSFCETKQETAVRASISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYIC 297
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
+ R+ Y+LCAV NH G GHYTA+C+ T
Sbjct: 298 SIFRKYPK---YNLCAVVNHFGDLD-GGHYTAFCKNSVT 332
>gi|62859025|ref|NP_001016228.1| ubiquitin carboxyl-terminal hydrolase 33 [Xenopus (Silurana)
tropicalis]
gi|123892401|sp|Q28CN3.1|UBP33_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|89268163|emb|CAJ82183.1| ubiquitin specific protease 33 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 121/249 (48%), Gaps = 36/249 (14%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS----VRCS 202
SV +DIF G + SSV+C C R S E F +LSLP+ PG L + S V+
Sbjct: 431 SVIADIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPI-PGKEDLAKLHSSSHQSSLVKAG 489
Query: 203 NCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQY 247
+C FW ++ TL +CL FF + L +C+
Sbjct: 490 SCGEAYAPQGWIAFFLEYFKSWFWGPTV-------TLQDCLAAFFARDELKGDNMYSCEK 542
Query: 248 CKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRR 305
CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD++ +++
Sbjct: 543 CKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPS 602
Query: 306 VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEH 365
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 603 --QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQNAE--- 656
Query: 366 GAYILVYQR 374
AY+L Y++
Sbjct: 657 -AYVLFYRK 664
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P + L+ D K L + M +W
Sbjct: 146 GLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDKKP--ALCKSYQKLMSDIW 203
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-----VVPDQY 116
V+ T + ++S F G QQDAQEFL L+ L+EE K V D
Sbjct: 204 HKNRPGFVIPTN-LFQGIKSVNPTFRGYSQQDAQEFLRCLMDVLHEELKEQIVEVEEDAQ 262
Query: 117 NGSTYSNTSSKQVGSFRALH 136
G N + S H
Sbjct: 263 TGIVEENLDEDKSQSDNDFH 282
>gi|392300180|gb|EIW11271.1| Doa4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 926
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 163/397 (41%), Gaps = 66/397 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P R+++ +C R T +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +C+K+ K I RLP LI+ KRF N K + +P
Sbjct: 776 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890
Query: 340 GRWYLYDDTVVSPV--DAQTVESAEAEHGAYILVYQR 374
W +DDT PV A + S AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNKAHAINS-----NAYVLFYHR 922
>gi|256269859|gb|EEU05118.1| Doa4p [Saccharomyces cerevisiae JAY291]
Length = 926
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P R+++ +C R T +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +C+K+ K I RLP LI+ KRF N K + +P
Sbjct: 776 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQMPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890
Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
W +DDT PV + A+A AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922
>gi|110625685|ref|NP_001004143.2| ubiquitin carboxyl-terminal hydrolase 22 [Mus musculus]
gi|78103329|sp|Q5DU02.2|UBP22_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|74196250|dbj|BAE33026.1| unnamed protein product [Mus musculus]
Length = 525
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|347361005|ref|NP_001178573.1| ubiquitin carboxyl-terminal hydrolase 22 [Rattus norvegicus]
Length = 525
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|398365391|ref|NP_010354.3| Doa4p [Saccharomyces cerevisiae S288c]
gi|464993|sp|P32571.2|UBP4_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Vacuole biogenesis protein SSV7
gi|408457|gb|AAC48915.1| deubiquitinating enzyme [Saccharomyces cerevisiae]
gi|577796|emb|CAA86791.1| ubiquitin carboxy terminal hydrolase 4 [Saccharomyces cerevisiae]
gi|798920|emb|CAA89098.1| Ubp4p [Saccharomyces cerevisiae]
gi|1431527|emb|CAA98887.1| DOA4 [Saccharomyces cerevisiae]
gi|259145312|emb|CAY78576.1| Doa4p [Saccharomyces cerevisiae EC1118]
gi|285811091|tpg|DAA11915.1| TPA: Doa4p [Saccharomyces cerevisiae S288c]
Length = 926
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P R+++ +C R T +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +C+K+ K I RLP LI+ KRF N K + +P
Sbjct: 776 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890
Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
W +DDT PV + A+A AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922
>gi|213624427|gb|AAI71081.1| hypothetical protein LOC548982 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 121/249 (48%), Gaps = 36/249 (14%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS----VRCS 202
SV +DIF G + SSV+C C R S E F +LSLP+ PG L + S V+
Sbjct: 431 SVIADIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPI-PGKEDLAKLHSSSHQSSLVKAG 489
Query: 203 NCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQY 247
+C FW ++ TL +CL FF + L +C+
Sbjct: 490 SCGEAYAPQGWIAFFLEYFKSWFWGPTV-------TLQDCLAAFFARDELKGDNMYSCEK 542
Query: 248 CKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRR 305
CKK + VK ++Q+ P +L + KRF F+ K+ + + FP EGLD++ +++
Sbjct: 543 CKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPS 602
Query: 306 VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEH 365
TYDL +V H G TA GHY AYCR WY +DD V+ V TV++AE
Sbjct: 603 --QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQNAE--- 656
Query: 366 GAYILVYQR 374
AY+L Y++
Sbjct: 657 -AYVLFYRK 664
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P + L+ D K L + M +W
Sbjct: 146 GLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDKKP--ALCKSYQKLMSDIW 203
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-----VVPDQY 116
V+ T + ++S F G QQDAQEFL L+ L+EE K V D
Sbjct: 204 HKNRPGFVIPTN-LFQGIKSVNPTFRGYSQQDAQEFLRCLMDVLHEELKEQIVEVEEDAQ 262
Query: 117 NGSTYSNTSSKQVGSFRALH 136
G N + S H
Sbjct: 263 TGIVEENLDEDKSQSDNDFH 282
>gi|150866195|ref|XP_001385704.2| hypothetical protein PICST_62413 [Scheffersomyces stipitis CBS
6054]
gi|149387451|gb|ABN67675.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 848
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 172/440 (39%), Gaps = 109/440 (24%)
Query: 5 LNGIANAGNTCYINSVLQCLSNTPAFRNVL---LNEDIPIHPDSKSQGQLVDALVNFMKM 61
+ G+ N GN+CY+N +LQCL TP ++ +P S SQ Q +N
Sbjct: 447 VTGLVNLGNSCYMNCILQCLGATPPLTKFFFPGISNSLP----SSSQVQSYRQHINVNNK 502
Query: 62 MWSSGNLVLNTKAILLAL-----RSYT----KKFDGN----------QQQDAQEFLLYLL 102
+ S G + N +L + +SY+ KK G+ QQD EFL +LL
Sbjct: 503 LGSKGIMTTNFFGLLANMFNSNGKSYSPTNFKKVMGSLSPGGQFATFDQQDCLEFLTFLL 562
Query: 103 AALNEEAK--VVPDQYNGSTYSNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIF 153
L+E+ V+ + S + +Q + L WE++ S+ D F
Sbjct: 563 DGLHEDLNQMVISNPEEKKAISELTPEQEKTREILPVRLASTIEWERYLKLNFSIIVDYF 622
Query: 154 VGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEI 213
GQ S ++C C TST Y F LSLP+P G Y R S
Sbjct: 623 QGQYLSQLKCLECGMTSTTYNAFSVLSLPIPEKLG--YSTNQRVS--------------- 665
Query: 214 FWELSLPVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLIL 269
L +CL +F E L + C CK+ + K I RLP +LI+
Sbjct: 666 --------------LDDCLKEFTTTELLDDNNKWHCPRCKRFTKSTKKITITRLPQILII 711
Query: 270 WFKRFS---SNFTQKVTSPIKFP-REGLDMEYYISASGRRVESR---------------- 309
FKRF + + K+ + + FP ++ LD+ Y G V S
Sbjct: 712 HFKRFKMTPNGYFNKLDTFVNFPVKDTLDLTSYWPDVGTSVNSNLKDSEIMSKEKEEQIL 771
Query: 310 -----------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGR----WYLYDDTVVSPVD 354
+ Y L V+NH G GHYT+Y +EG + W +DD ++
Sbjct: 772 STLPSRNQQKPFRYKLYGVANHFGNLTT-GHYTSYIHKEGESKKTRGWIYFDDAKLT--- 827
Query: 355 AQTVESAEAEHGAYILVYQR 374
ES AY L YQR
Sbjct: 828 YNCKESDVMNKNAYCLFYQR 847
>gi|348560267|ref|XP_003465935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cavia
porcellus]
Length = 525
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHHCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|74145360|dbj|BAE36137.1| unnamed protein product [Mus musculus]
Length = 525
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|60360058|dbj|BAD90248.1| mKIAA1063 protein [Mus musculus]
Length = 570
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 219 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 277
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 278 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 334
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 335 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 376
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 377 PGSSTPFWPLSPGSEGSVVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 422
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 423 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 481
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 482 FMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 539
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 540 DDAIITKASIKDVLDSE----GYLLFYHKQ 565
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 165/402 (41%), Gaps = 100/402 (24%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFR---------NVLLNEDIPIHPDSKSQGQLVDALV- 56
G+ N GNTC++N+VLQ L+N F + N H S ++ ++ D ++
Sbjct: 225 GLKNLGNTCFMNAVLQSLNNIQEFSYYFSQLPSLEMKTNGRKVYHSRSYTRQEMHDVVMA 284
Query: 57 -NFMKMMWS------SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE- 108
K++ + ++ + + L + +F G QQQDA EFL Y+L L+ E
Sbjct: 285 EELRKVLINLNTGGCGSKAAISPECLFLVIWKVVPRFRGYQQQDAHEFLRYMLDRLHTEL 344
Query: 109 AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
++VPD+ G AS+ + +F
Sbjct: 345 QQLVPDRPEGVK-----------------------APASIVTAVF--------------- 366
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-- 226
GGTL +S VRC C S ++ F +LSL +P G
Sbjct: 367 ------------------GGTL-----QSEVRCLACGTESKKFDPFLDLSLELPESGRHD 403
Query: 227 ---TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSN 277
+L +CL F E L +T C CK + K + I+RLP VL L KRF +
Sbjct: 404 APVSLTDCLASFVQIEELADTERYFCSSCKCKQKSTKQFWIRRLPNVLCLHLKRFRWHNY 463
Query: 278 FTQKVTSPIKFPREGLDMEYY----ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAY 333
F KV + I FP LDM + + + R YDL AV H G A GHYTA+
Sbjct: 464 FRTKVDTSISFPLLSLDMSGFVLPNVPDTRRSGRGSLLYDLAAVIVHHGSGAGSGHYTAF 523
Query: 334 CRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
E +W+ ++D V D+ V S + YIL Y RR
Sbjct: 524 AINE--EQWFHFNDQTVRATDSAAVASCK----PYILFYIRR 559
>gi|239977664|sp|B3LGK1.1|UBP4_YEAS1 RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Vacuole biogenesis protein SSV7
gi|190404963|gb|EDV08230.1| ubiquitin isopeptidase [Saccharomyces cerevisiae RM11-1a]
gi|365766573|gb|EHN08069.1| Doa4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 926
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 623 YKEQVDGSKKIPISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P R+++ +C R T +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +C+K+ K I RLP LI+ KRF N K + +P
Sbjct: 776 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890
Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
W +DDT PV + A+A AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922
>gi|327283671|ref|XP_003226564.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
2 [Anolis carolinensis]
Length = 510
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + +
Sbjct: 159 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSC-LVCEMSTLFQEFY 217
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 218 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 274
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 275 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 316
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + T G TL +CL +F E L +
Sbjct: 317 PGSSTPFWPLSPGSDGSVVNGESHVT--------------GTTTLTDCLRRFTRPEHLGS 362
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 363 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 421
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 422 FMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 479
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 480 DDAIITKASIKDVLDSE----GYLLFYHKQ 505
>gi|327283669|ref|XP_003226563.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like isoform
1 [Anolis carolinensis]
Length = 525
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSC-LVCEMSTLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + T G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSDGSVVNGESHVT--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|410895865|ref|XP_003961420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Takifugu
rubripes]
Length = 506
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 171/411 (41%), Gaps = 105/411 (25%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K Q Q LV M ++
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCQMQSDSCLVCEMSQLF 210
Query: 64 S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG
Sbjct: 211 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK----DDNGK 266
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+N + + IF G L+S V C C ST + FW++
Sbjct: 267 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 308
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------------- 226
SL + PG T FW P+ PGG
Sbjct: 309 SLDL-PGSST-----------------------PFW----PLSPGGDSSALNGESHATGA 340
Query: 227 -TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT 279
TL +CL +F E L ++ C C + K +++LP V KRF S+
Sbjct: 341 TTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLR 400
Query: 280 QKVTSPIKFPREGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKT 324
+K+T+ + FP E LDM ++++S ESR Y L AV NH G T
Sbjct: 401 RKITTYVSFPLE-LDMTPFMASSK---ESRMNGQCQQIVDPFNNDNKYSLFAVVNHQG-T 455
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT + R+ +W+ DD +++ + V +E Y+L Y ++
Sbjct: 456 LESGHYTTFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 501
>gi|344302352|gb|EGW32657.1| hypothetical protein SPAPADRAFT_51192 [Spathaspora passalidarum
NRRL Y-27907]
Length = 848
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 167/424 (39%), Gaps = 95/424 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF-----------RNVLLNEDIPIHPDSKSQGQLVDAL 55
G+ N GN+CY+N VLQCL TP N + I + S+G L
Sbjct: 463 GLVNLGNSCYMNCVLQCLGATPQLTTFFFPSSSDLSNPQFKQHINTNNKLGSKGILTVQF 522
Query: 56 VNFMKMMWSSGNLVLNT---KAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-- 110
+ M+SS V N K I+ +L S +++F QQD EFL++LL L+E+
Sbjct: 523 AELLSNMFSSNGKVFNPSKFKKIMGSL-SPSRQFATYDQQDCIEFLIFLLDTLHEDLNQM 581
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRC 163
+ D S + +Q S L WE++ SV D F GQL S ++C
Sbjct: 582 AILDPQEKKMISELTPEQEKSRETLPIRLASTIEWERYLKLNFSVIVDYFQGQLLSQLKC 641
Query: 164 SNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 223
C TST Y F LSLP+P +L S + S
Sbjct: 642 LECGFTSTTYNSFSILSLPIPE--------KLNKSTKVS--------------------- 672
Query: 224 GGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT 279
L +CL +F E L + C CK+ + K I RLP VLI+ F RF
Sbjct: 673 ----LQDCLEEFTTIELLDDNNKWHCPKCKRFTKSTKKIAITRLPQVLIINFTRFKMTPD 728
Query: 280 ---QKVTSPIKFP-REGLDMEYYISASGRRVESR-------------------------Y 310
K+ + + +P E LD+ Y G + +
Sbjct: 729 GRFNKLETFVTYPVSEELDLTKYWPDVGTSINPSLPSVMSVDKEREMLKTFPVRNQVPPF 788
Query: 311 TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYIL 370
Y L V+NH G GHYT+Y ++ G G W +DD+ ++ + AY L
Sbjct: 789 KYQLFGVANHFGNLTT-GHYTSYVKKHGRG-WCYFDDSKIT---YKCSTDKVLNKNAYCL 843
Query: 371 VYQR 374
+QR
Sbjct: 844 FFQR 847
>gi|239611326|gb|EEQ88313.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ER-3]
Length = 1070
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 178/414 (42%), Gaps = 88/414 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+NS++QCLS T + D H + SQG L N ++
Sbjct: 697 GLVNMGSTCYMNSIIQCLSVTVQLTKFFI--DNRFHSQVQKNWKGSQGILPGLFANLVRS 754
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + V+ + + ++ G++QQDA+EF LL L+E+ + +N +
Sbjct: 755 LWKNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNL---NWNRTPL 811
Query: 122 SNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+++Q + W ++ E S S +F GQ S +RC C+RTST
Sbjct: 812 RPLTAEQEMRREQMPIEQVSTIEWNRYCHREFSYISSLFAGQHASRLRCRTCRRTST--- 868
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYE 230
YE F+ +S+ +P G G LY+
Sbjct: 869 -----------------------------------TYEAFFSISVEIPTSPSSGAGDLYQ 893
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF---TQKVT 283
CLN + E L C +C+ + + K I R P L++ FKRFS + T+K+
Sbjct: 894 CLNSYCQEEMLSGDEVWKCPHCRCEREATKQIIITRAPRFLVIHFKRFSVSRYQQTRKIH 953
Query: 284 SPIKFPREGLDMEYYIS------------ASGRRVESR--------YTYDLCAVSNHIGK 323
+PI FP GLD+ +++ A G +S+ Y Y+ + HIG
Sbjct: 954 TPINFPITGLDITPFMAPPVGTSALLNGGADGTNKKSQPELATTPPYIYNAYGIVRHIGS 1013
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
++ GHY + R + G W +DD V+ + + A++ AY++ Y+RR
Sbjct: 1014 SSSEGHYISLVRDDRRGCWRKFDDQRVTDFNPSGLRPADSLQNDQAYLVFYERR 1067
>gi|194883136|ref|XP_001975660.1| GG20435 [Drosophila erecta]
gi|190658847|gb|EDV56060.1| GG20435 [Drosophila erecta]
Length = 980
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRS-SVRCSNCK 205
S+ SD+F G+L SSV+C C R ST E F +LSLP+P Q S SV+ N
Sbjct: 312 SIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAA 371
Query: 206 RTSTVYEIFW------ELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLV 255
TS W L + TLY+C+ FF+ + L +C+ C K +
Sbjct: 372 ETSARTNEGWLSWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGI 431
Query: 256 KLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYD 313
K + LP VL + KRF ++ ++ K++S + FP EG DM YI + + Y+
Sbjct: 432 KYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVA--IYN 489
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
L +V H G T GHYT Y R G+WY +DD V+ V ++ V+S + AY+L Y
Sbjct: 490 LSSVICHHG-TVGSGHYTCYARNALNGKWYEFDDQFVTEVPSELVQSCQ----AYVLFYH 544
Query: 374 R 374
+
Sbjct: 545 K 545
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQ-----GQLVDALVN 57
GL G+ N NTCY+NS LQ LSN P + +N D+ + +S G L +
Sbjct: 78 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKPGGLAKSYRR 137
Query: 58 FMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
M+ +W + + + IL +R+ F G QQ D QEFL + L+EE
Sbjct: 138 LMQDIWQDVDDPKEFIAPRGILYGIRTVHPMFRGFQQHDTQEFLRCFMDQLHEE 191
>gi|149758247|ref|XP_001488653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Equus
caballus]
Length = 480
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 129 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 187
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 188 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 244
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + + IF G L+S V C C ST + FW++SL +
Sbjct: 245 PNHC------------------SCIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 286
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 287 PGSSTPFWPLSPGSEGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 332
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 333 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 391
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 392 FMASSKESRMNGQYQQPMDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 449
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 450 DDAIITKASIEDVLDSE----GYLLFYHKQ 475
>gi|195485907|ref|XP_002091282.1| GE13566 [Drosophila yakuba]
gi|194177383|gb|EDW90994.1| GE13566 [Drosophila yakuba]
Length = 985
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRS-SVRCSNCK 205
S+ SD+F G+L SSV+C C R ST E F +LSLP+P Q S SV+ N
Sbjct: 312 SIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAA 371
Query: 206 RTSTVYEIFW------ELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLV 255
T+ W L + TLY+C+ FF+ + L +C+ C K +
Sbjct: 372 ETTARTNEGWLSWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGI 431
Query: 256 KLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYD 313
K + LP VL + KRF ++ ++ K++S + FP EG DM YI + + Y+
Sbjct: 432 KFSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVA--IYN 489
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
L +V H G T GHYT Y R G+WY +DD V+ V ++ V+S + AY+L Y
Sbjct: 490 LSSVICHHG-TVGGGHYTCYARNALNGKWYEFDDQFVTEVSSELVQSCQ----AYVLFYH 544
Query: 374 R 374
+
Sbjct: 545 K 545
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQ-----GQLVDALVN 57
GL G+ N NTCY+NS LQ LSN P + +N D+ + +S G L +
Sbjct: 78 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKPGGLAKSYRR 137
Query: 58 FMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
M+ +W + + ++IL +R+ F G QQ D QEFL + L+EE
Sbjct: 138 LMQDIWQDVDDPKEFIAPRSILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEE 191
>gi|327348664|gb|EGE77521.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ATCC 18188]
Length = 1107
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 178/414 (42%), Gaps = 88/414 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+NS++QCLS T + D H + SQG L N ++
Sbjct: 734 GLVNMGSTCYMNSIIQCLSVTVQLTKFFI--DNRFHSQVQKNWKGSQGILPGLFANLVRS 791
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + V+ + + ++ G++QQDA+EF LL L+E+ + +N +
Sbjct: 792 LWKNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNL---NWNRTPL 848
Query: 122 SNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+++Q + W ++ E S S +F GQ S +RC C+RTST
Sbjct: 849 RPLTAEQEMRREQMPIEQVSTIEWNRYCHREFSYISSLFAGQHASRLRCRTCRRTST--- 905
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYE 230
YE F+ +S+ +P G G LY+
Sbjct: 906 -----------------------------------TYEAFFSISVEIPTSPSSGAGDLYQ 930
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF---TQKVT 283
CLN + E L C +C+ + + K I R P L++ FKRFS + T+K+
Sbjct: 931 CLNSYCQEEMLSGDEVWKCPHCRCEREATKQIIITRAPRFLVIHFKRFSVSRYQQTRKIH 990
Query: 284 SPIKFPREGLDMEYYIS------------ASGRRVESR--------YTYDLCAVSNHIGK 323
+PI FP GLD+ +++ A G +S+ Y Y+ + HIG
Sbjct: 991 TPINFPITGLDITPFMAPPVGTSALLNGGADGTNKKSQPELATTPPYIYNAYGIVRHIGS 1050
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
++ GHY + R + G W +DD V+ + + A++ AY++ Y+RR
Sbjct: 1051 SSSEGHYISLVRDDRRGCWRKFDDQRVTDFNPSGLRPADSLQNDQAYLVFYERR 1104
>gi|324515005|gb|ADY46059.1| Ubiquitin carboxyl-terminal hydrolase 46 [Ascaris suum]
Length = 392
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 164/390 (42%), Gaps = 61/390 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSV+Q L FR +L + + L+ L + + +
Sbjct: 26 GLVNFGNTCYCNSVIQALYFCQPFREKILQYKQQLKKSGTQKENLLTCLADLFHNIATQK 85
Query: 67 NLV--LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
V + K + L+ + FD QQDA EFL YLL ++E + S
Sbjct: 86 RRVGTIAPKRFITKLKKENEIFDNYMQQDAHEFLNYLLNTISE-------TLSEEKRSEK 138
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST-VYEIFWELSLPV 183
+SK G + +SV + RS + S K ST ++EIF
Sbjct: 139 ASKANGMAKK----------GSSVINPSNTHDSRSQCQPSGSKGESTWIHEIFQ------ 182
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
GTL + RC NC+ S+ E F +LS+ V ++ CL F N ETL
Sbjct: 183 ----GTL-----TNETRCLNCETVSSKDEDFLDLSVDVEQNA-SITHCLRVFSNMETLQA 232
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREGLD 294
C+ C + + K +++LP +L L KRF S +T K++ + FP L+
Sbjct: 233 DQKYYCENCCSKQEAQKRMRVKKLPQLLALHLKRFKYVEQLSRYT-KLSYRVLFP---LE 288
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ + + S V YDLCAV H G T GHY + W L+DD +V +D
Sbjct: 289 LRLF-NVSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITVVKSHAF--WLLFDDDIVDKID 345
Query: 355 AQTVES---------AEAEHGAYILVYQRR 375
T+E + AYIL YQ R
Sbjct: 346 PVTIEDFFGLSECGVQKNSESAYILFYQAR 375
>gi|47219848|emb|CAF97118.1| unnamed protein product [Tetraodon nigroviridis]
Length = 977
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 138/287 (48%), Gaps = 53/287 (18%)
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
G +YS S+ + S + +K Q+ SV SDIF G + S V+C C R ST E F
Sbjct: 427 GPSYSFKKSQMMLSSK-----KKKQSHFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQ 481
Query: 178 ELSLPVPPGGGTLYECQLRSS------VRCSNCKRT-------------------STVYE 212
+LSLP+P G +L SS V+ C + S +
Sbjct: 482 DLSLPIP---GKEDLAKLHSSIHQNLPVKTGTCPESYNSQGWISYIMESIRRFVVSCIPT 538
Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLI 268
FW + TL +CL FF + L +C+ CKK + VK ++ +LP +L
Sbjct: 539 WFWGPMV-------TLEDCLAAFFAADELKGDNMYSCEKCKKLRNGVKYCKVLKLPEILC 591
Query: 269 LWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
+ KRF ++ K++S + FP EGL+M+ +++ + TYDL +V H G TA
Sbjct: 592 IHLKRFRHEVMYSFKISSHVSFPLEGLNMQPFLAKDSPSQVT--TYDLLSVICHHG-TAG 648
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
GHY AYC+ G+WY +DD V+ V V++AE AY+L Y+
Sbjct: 649 SGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE----AYVLFYR 691
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L+ + D K L + + +W
Sbjct: 147 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDCSGLVRTDKKP--ALCKSYQKLISELW 204
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 205 HKKRPSYVVPT-SLSNGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 252
>gi|410051732|ref|XP_003953155.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Pan troglodytes]
Length = 513
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 162 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 220
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 221 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 277
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 278 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 319
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 320 PGSSTPFWPLSPGSEGNVVNGESHMS--------------GTTTLTDCLRRFTRPEHLGS 365
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 366 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 424
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 425 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 482
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 483 DDAIITKASIKDVLDSE----GYLLFYHKQ 508
>gi|5689463|dbj|BAA83015.1| KIAA1063 protein [Homo sapiens]
Length = 593
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 242 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 300
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 301 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 357
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 358 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 399
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 400 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 445
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 446 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 504
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 505 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 562
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 563 DDAIITKASIKDVLDSE----GYLLFYHKQ 588
>gi|320580098|gb|EFW94321.1| Ubiquitin isopeptidase [Ogataea parapolymorpha DL-1]
Length = 1130
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 167/408 (40%), Gaps = 87/408 (21%)
Query: 5 LNGIANAGNTCYINSVLQCLSNTPAFRNVLL----NEDIPIHPDSKSQGQLVDALVNFMK 60
+ G+AN GN+CY+NS LQCL + + + I ++ S+G L + + +
Sbjct: 771 MTGLANLGNSCYMNSALQCLIGSKRLTEFFIVGTFKQHINMNSRLGSKGILANEFSSLLT 830
Query: 61 MMWSSGN-------LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE----- 108
++ + + ++ +L S + D QQD EFL Y L +L+E+
Sbjct: 831 ELYKKSSPSRPQSVTPRQFRKVIASLNSMYRTLD---QQDCSEFLNYALDSLHEDLNENG 887
Query: 109 --AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
K+ ++ S WE++ T S+ DIF GQ+ S +
Sbjct: 888 NHPKLPELSKEEEEKREKLPIRIASTIE---WERYLKTNFSIIVDIFQGQIMSQL----- 939
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG- 225
RC NC TST Y F +SLP+P G
Sbjct: 940 ---------------------------------RCLNCSTTSTTYNAFSTVSLPIPENGP 966
Query: 226 -GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFT 279
TL C ++F E L N C +CK + +K +I RLP VLI+ KRF N+
Sbjct: 967 KSTLGACFDEFVKPELLDNDNAWLCPHCKTKQRTLKHLQISRLPQVLIIHLKRFKMGNYL 1026
Query: 280 QKVTSPIKFPREGLDMEYY---ISASGRRVE-SR---------YTYDLCAVSNHIGKTAL 326
K+ + I +P E L ++ Y + + R+E SR + Y L V NH G +
Sbjct: 1027 TKLNTYIDYPLE-LQLDKYWPNVESELERIELSRLPIRGQVPPFRYKLYGVINHFG-NLI 1084
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYTA+ + W L+DD V + AY+L Y+R
Sbjct: 1085 NGHYTAFVEKGPGNGWCLFDDEKVY---KNCAPNKVVNGDAYMLFYER 1129
>gi|261205450|ref|XP_002627462.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
gi|239592521|gb|EEQ75102.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
Length = 1082
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 178/414 (42%), Gaps = 88/414 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+NS++QCLS T + D H + SQG L N ++
Sbjct: 709 GLVNMGSTCYMNSIIQCLSVTVQLTKFFI--DNRFHSQVQKNWKGSQGILPGLFANLVRS 766
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + V+ + + ++ G++QQDA+EF LL L+E+ + +N +
Sbjct: 767 LWKNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNL---NWNRTPL 823
Query: 122 SNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+++Q + W ++ E S S +F GQ S +RC C+RTST
Sbjct: 824 RPLTAEQEMRREQMPIEQVSTIEWNRYCHREFSYISSLFAGQHASRLRCRTCRRTST--- 880
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYE 230
YE F+ +S+ +P G G LY+
Sbjct: 881 -----------------------------------TYEAFFSISVEIPTSPSSGAGDLYQ 905
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF---TQKVT 283
CLN + E L C +C+ + + K I R P L++ FKRFS + T+K+
Sbjct: 906 CLNSYCQEEMLSGDEVWKCPHCRCEREATKQIIITRAPRFLVIHFKRFSVSRYQQTRKIH 965
Query: 284 SPIKFPREGLDMEYYIS------------ASGRRVESR--------YTYDLCAVSNHIGK 323
+PI FP GLD+ +++ A G +S+ Y Y+ + HIG
Sbjct: 966 TPINFPITGLDITPFMAPPVGTSALLNGGADGTNKKSQPELATTPPYIYNAYGIVRHIGS 1025
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
++ GHY + R + G W +DD V+ + + A++ AY++ Y+RR
Sbjct: 1026 SSSEGHYISLVRDDRRGCWRKFDDQRVTDFNPSGLRPADSLQNDQAYLVFYERR 1079
>gi|10441889|gb|AAG17222.1|AF217979_1 unknown [Homo sapiens]
Length = 550
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 158/380 (41%), Gaps = 93/380 (24%)
Query: 22 QCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMMWSSGNL-VLNTKAILLAL 79
+CLS+T R+ L D P +L +A + + +W + +N
Sbjct: 227 ECLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCEAVNPTRFRAVF 286
Query: 80 RSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQYNGSTYSNTSSKQVGSF-- 132
+ Y F G QQDAQEFL L+ L+ E + P NG S ++ G+
Sbjct: 287 QKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANGPVPS--PPRRGGALLE 344
Query: 133 --------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
RA W+++ E S D+FVGQL+
Sbjct: 345 EPELSDDDRANLMWKRYLEREDSKIVDLFVGQLK-------------------------- 378
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP---GGG--TLYECLNKFFNGE 239
S ++C C ST +E+F +LSLP+P GG +L +C N F E
Sbjct: 379 ------------SCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEE 426
Query: 240 TLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGL 293
L + C C++++ K +QR P +L+L RFS++ +K + + FP + L
Sbjct: 427 ELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRL 486
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
+ + S A S H YGHYTA CR + TG W++Y+D+ VSPV
Sbjct: 487 SLGDFASDK-------------AGSVH------YGHYTALCRCQ-TG-WHVYNDSRVSPV 525
Query: 354 DAQTVESAEAEHGAYILVYQ 373
V S+E Y+L YQ
Sbjct: 526 SENQVASSE----GYVLFYQ 541
>gi|117558705|gb|AAI26899.1| USP22 protein [Homo sapiens]
Length = 513
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 162 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 220
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 221 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 277
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 278 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 319
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 320 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 365
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 366 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 424
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 425 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 482
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 483 DDAIITKASIKDVLDSE----GYLLFYHKQ 508
>gi|397466402|ref|XP_003804951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pan paniscus]
Length = 513
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 162 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 220
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 221 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 277
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 278 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 319
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 320 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 365
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 366 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 424
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 425 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 482
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 483 DDAIITKASIKDVLDSE----GYLLFYHKQ 508
>gi|293346292|ref|XP_001081082.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
[Rattus norvegicus]
Length = 375
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 156/381 (40%), Gaps = 85/381 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G+ G+ N GNTCY+N++LQCL +T L+ I K ++ A M MW
Sbjct: 38 GVTGLRNLGNTCYMNAILQCLCSTSPLVEYFLSGKY-ITALQKDCSEVTTAFAYLMTDMW 96
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ ++ + L A+ S F QQDAQEFL+Y+L L+E K
Sbjct: 97 LGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALK-------KHCRGR 149
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S K+ A + K E S+ + +F GQL S+ C C+ + E+F LSLP+
Sbjct: 150 ASEKRT----AQNCCRKVPAHETSIITRLFEGQLSYSITCLKCETCTYKNEVFTILSLPI 205
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL-- 241
P + YEC L+ +CL FF +TL
Sbjct: 206 P----SEYECSLQ---------------------------------DCLQCFFQQDTLTW 228
Query: 242 --HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKR--------FSSNFTQKVTSPIKFPRE 291
C +C+ + + I + P +++L KR S+ Q+ FP+
Sbjct: 229 NNQIHCSFCEIKQETAVRTTISKAPKIIVLHLKRSLIQMAPGHSTLKKQQEEDGKGFPKP 288
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
G Y+ + NH G GHYTA+C+ T WY +DDT VS
Sbjct: 289 G-----YLGNVSQ--------------NHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVS 328
Query: 352 PVDAQTVESAEAEHGAYILVY 372
+ +V++A AY+L Y
Sbjct: 329 EIPDTSVQTAT----AYLLFY 345
>gi|425767739|gb|EKV06301.1| hypothetical protein PDIP_80120 [Penicillium digitatum Pd1]
gi|425769512|gb|EKV08004.1| hypothetical protein PDIG_70800 [Penicillium digitatum PHI26]
Length = 1088
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 175/396 (44%), Gaps = 64/396 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G TCY+NS +QCLS T ++ + SQG + N + +W
Sbjct: 725 GLTNFGVTCYMNSTIQCLSATIPLSRFFIDNRFRSYVQKNWKGSQGVMPGLYANLTRSLW 784
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + +++ ++QQDA+EF +++ L+E+ +
Sbjct: 785 KNDVEVIMPTSFRNFCGRLNREWAIDRQQDAKEFFDFVVDCLHEDLNI------------ 832
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ Q R L + E+ Q + V Q+ C E F
Sbjct: 833 --NWQRTPLRPLTFSEEMQRERMPMTK---VSQIEWDRYCHR-------EESFI------ 874
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-GGGTLYECLNKFFNGETLH 242
+L+ Q S +RC+ C++TST YE F+ +S+ +PP G G +Y+CL + E L
Sbjct: 875 ----SSLFAGQHASRLRCTTCQQTSTTYEAFYSISIEIPPTGAGDIYQCLRSYCQEEMLS 930
Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM 295
C +CK + K I R P +L++ FKRFS++ TQ KV +PI+FP GL M
Sbjct: 931 GDEVWKCPHCKCKRMATKQIIITRAPQILVVHFKRFSASKTQSARKVHTPIEFPLHGLRM 990
Query: 296 EYYI--------------SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ ++ +G V +TYD AV H+G + GHY + R
Sbjct: 991 DDFVISHPHPPPPEPGSPPTTGATVPP-FTYDAFAVLRHLGSSMGSGHYISLVRDAERQC 1049
Query: 342 WYLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
W +DD T +P D ++ E + E AYI+ Y+R
Sbjct: 1050 WRKFDDDRTTDFNPRDLRSRERLQNEQ-AYIVFYER 1084
>gi|393912474|gb|EFO28420.2| hypothetical protein LOAG_00066 [Loa loa]
Length = 931
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 165/379 (43%), Gaps = 63/379 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK--SQGQLVDALVNFM 59
G G+ N GNTC++NSVLQ L NT R + + ++ ++K + G + M
Sbjct: 601 GYTGLYNLGNTCFMNSVLQTLFNTIPLRRIFTKNEFVRFVNRNNKMGTMGVISSVFSAMM 660
Query: 60 KMMWSSGNLVLNTKAIL--LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+WS L + L A DG QQ DAQEF +YLL AL+E+ V +
Sbjct: 661 DSVWSGLFKALRPQQFLETFAAEVNASLADG-QQHDAQEFQIYLLDALHEDTNRVVKRI- 718
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
T+ + A Y EK + S SDIF Q SS++C+ CKR S +E
Sbjct: 719 --TFEQNYTGADLEAEAADYNEKLRRFACSPISDIFNCQTVSSLQCNKCKRQSVTFEELA 776
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LS+ VP T+ +C + F ++ L G + C N
Sbjct: 777 QLSIEVPNRNSTIEDC----------------IRNHFQDVEL----DGSCKWRCPN---- 812
Query: 238 GETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDM 295
C+ + + +LP VL++ KRF+ + QK + + F L
Sbjct: 813 ----------CESLQTATRRTFLWKLPEVLVIHLKRFTFMGDNWQKNDAYVAFNTFPL-- 860
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
++++ Y + L AV NH G GHYTA R + T +W L+DD +V+P+D
Sbjct: 861 ---------KLQAEY-FSLYAVINHRGSLN-SGHYTAVVRNQTTKQWLLFDDDLVAPIDV 909
Query: 356 QTVESAEAEHGAYILVYQR 374
+ S A+IL +Q+
Sbjct: 910 DLICSKY----AFILYFQK 924
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 129/254 (50%), Gaps = 28/254 (11%)
Query: 140 KFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLR--- 196
K T S+ SD+F G++ SSV+C C+R S+ E F +LSLP+ P L++ Q+
Sbjct: 361 KKPTELKSIVSDVFDGRILSSVQCLTCERVSSTRETFQDLSLPI-PSKDHLHQIQVNHSH 419
Query: 197 --SSVRCSNCKRTS------TVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----T 244
SS C S + W + P G L +CL FF+ + L +
Sbjct: 420 APSSTHKGTCGEVSLNQGGLLSWLFSWMKNWLWGPVIG-LQDCLAAFFSEDELKGDNMYS 478
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISAS 302
C+ CKK + K ++ RLP +L + KRF F+ K+ S + FP E LDM Y+
Sbjct: 479 CEKCKKLRNGKKYSKVMRLPEILCIHLKRFRHEFMFSTKINSYVSFPLENLDMGPYLH-- 536
Query: 303 GRRVESRY-TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESA 361
+ E++ TYDL AV H G TA GHYT+Y + +WY +DD V+ VD Q VE+
Sbjct: 537 -KDCENQVTTYDLVAVICHHG-TAGGGHYTSYALNHLSQQWYEFDDQYVTEVDLQQVENC 594
Query: 362 EAEHGAYILVYQRR 375
E AY+L Y+ +
Sbjct: 595 E----AYVLFYRSK 604
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ +Q LSN P L D P + S + L + + M+ +W
Sbjct: 112 GLTGLQNIGNTCYMNAAIQSLSNCPPLCRFFL--DSPAYVKSDKKPMLSLSYMKLMQEIW 169
Query: 64 SSGNLV-LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ ++ ++ F G QQDAQEFL + ++EE K
Sbjct: 170 HKKRPSYVVPSSVSQGIKFIHPMFRGYTQQDAQEFLRCFMDQVHEELK 217
>gi|395748703|ref|XP_002827183.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pongo abelii]
Length = 746
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 395 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 453
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 454 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 510
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 511 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 552
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 553 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 598
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 599 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 657
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 658 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 715
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 716 DDAIITKASIKDVLDSE----GYLLFYHKQ 741
>gi|431914524|gb|ELK15774.1| Ubiquitin carboxyl-terminal hydrolase 22 [Pteropus alecto]
Length = 525
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPADSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIEDVLDSE----GYLLFYHKQ 520
>gi|410212034|gb|JAA03236.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410262710|gb|JAA19321.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410299182|gb|JAA28191.1| ubiquitin specific peptidase 22 [Pan troglodytes]
gi|410356232|gb|JAA44523.1| ubiquitin specific peptidase 22 [Pan troglodytes]
Length = 525
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGNVVNGESHMS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|402899046|ref|XP_003912516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Papio anubis]
Length = 525
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGNVVNGESHMS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|84569929|gb|AAI10500.1| USP22 protein [Homo sapiens]
Length = 512
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 161 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 219
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 220 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 276
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 277 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 318
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 319 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 364
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 365 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 423
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 424 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 481
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 482 DDAIITKASIKDVLDSE----GYLLFYHKQ 507
>gi|298714959|emb|CBJ33989.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 323
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 129/304 (42%), Gaps = 24/304 (7%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNFMKMM 62
G+ N GNTC++NS LQCL N A + L D + + +G + A + M
Sbjct: 25 GLQNLGNTCFMNSALQCLFNCEALADYFLGFDWKREINRGNFLGHKGLMASAFGSLANDM 84
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG-STY 121
W S L + F G +QQD QEFL +LL A++E+ VP+
Sbjct: 85 WRSDKASLRPGDFKTQVGESMPLFAGYEQQDVQEFLAFLLDAVHEDLNRVPNADRKYVEA 144
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ A+ W+ + S+ D+F GQLRS+++CS C R S ++ F LS+
Sbjct: 145 KEAKEGEAEEMVAMQAWKGYLERNRSIIVDLFQGQLRSALQCSVCGRRSVTFDPFMYLSV 204
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
P+P S I +L C+ F E L
Sbjct: 205 PLPEDMNMNNGDDEGEGRPRRGPGGGSGGPGI-------------SLEACIRMFCEEEVL 251
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
C CKK K ++ ++PPVLI+ KRF+ + K++S + FP EGLD+
Sbjct: 252 DGDNAWYCSNCKKHQRATKKLDLWKVPPVLIVHLKRFAG--SSKISSLVTFPLEGLDLSE 309
Query: 298 YISA 301
+ +
Sbjct: 310 VVKS 313
>gi|118380392|ref|XP_001023360.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89305127|gb|EAS03115.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 807
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 55/355 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSKSQGQLVDALVNFMKMMWS 64
G+ N GNTC++NS LQC+ NTP F + + I+P +K Q L+ K + +
Sbjct: 462 GLNNIGNTCFMNSALQCVFNTPVFNEFFFSGSFEKDINPKNKGVAQSYSVLI---KQVRN 518
Query: 65 SGNLVLNTK-AILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+GN A+ ++ + +F G QQDAQE L LL L+E+ V +
Sbjct: 519 TGNSSSQAPYALKKSIERVSSQFYGTDQQDAQELLRCLLDGLHEDLNRVRAKPKYRELEA 578
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
++K+ + +++ ++ + SV +D F GQL S V CS CK S ++ F +LSL
Sbjct: 579 DTNKRTLQEISDDWYQYYKGRDDSVVTDFFSGQLLSKVICSKCKNESLAFDNFMDLSLSF 638
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
G L + L F E L +
Sbjct: 639 SRG-----------------------------------QENEADLVDLLKAFLKEENLDD 663
Query: 244 T--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDMEYYI 299
C CK ++ + +E+ +LP +L++ KRF+ ++ K++S + FP D++ +I
Sbjct: 664 DYYCSKCKARTKSRRQFELYKLPQILVIHLKRFNFGRSYRNKISSNVSFPVTNFDVQQFI 723
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYC---------RREGTGRWYLY 345
+S Y+L + NH G + GHYT++ R + +GR Y
Sbjct: 724 QSSTDNSVKNSKYELFGIVNHSGSLS-GGHYTSHAGSISQESINRYQSSGRQSPY 777
>gi|390481017|ref|XP_003736056.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-like [Callithrix jacchus]
Length = 697
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 346 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 404
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 405 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 461
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 462 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 503
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + G TL +CL +F E L +
Sbjct: 504 PGSSTPFWPLSPGSEGNVVNGESHMA--------------GTTTLTDCLRRFTRPEHLGS 549
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 550 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 608
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 609 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 666
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 667 DDAIITKASIKDVLDSE----GYLLFYHKQ 692
>gi|345305249|ref|XP_001511206.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ornithorhynchus anatinus]
Length = 540
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 169/391 (43%), Gaps = 63/391 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S + + F + +
Sbjct: 189 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQE--F 246
Query: 64 SSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG +
Sbjct: 247 YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKAN 303
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
N + + IF G L+S V C C ST + FW++SL
Sbjct: 304 NPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLD 345
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+P + S N + + G TL +CL +F E L
Sbjct: 346 LPGSSTPFWPLSPGSDGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLG 391
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDME 296
++ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 392 SSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMT 450
Query: 297 YYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 451 PFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFK 508
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 509 CDDAIITKASIKDVLDSE----GYLLFYHKQ 535
>gi|432101254|gb|ELK29492.1| Ubiquitin carboxyl-terminal hydrolase 21 [Myotis davidii]
Length = 663
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 56/319 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
S+ + + + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 329 ASSPAPSPPHRGGALLEEPDLSDNDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
ST +E+F +LSLP+P G + LR
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417
Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQK 281
+C + F E L + C C++++ K +QR P +L+L RFS++ +K
Sbjct: 418 --DCFSLFTKEEELESENAPVCDRCQQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475
Query: 282 VTSPIKFPREGLDMEYYIS 300
+ + FP + L + + S
Sbjct: 476 SSVGVDFPLQRLSLGDFAS 494
>gi|210147497|ref|NP_001129942.1| ubiquitin carboxyl-terminal hydrolase 49 [Rattus norvegicus]
Length = 685
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 175/455 (38%), Gaps = 125/455 (27%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-----------------IPIHP 43
++PG+ G+ N GNTCY+NS+LQ LS+ FR LN D IP P
Sbjct: 245 VAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQIPSRP 304
Query: 44 DS-----------KSQG-------------------------------QLVDALVNFMKM 61
S ++QG L L ++
Sbjct: 305 ASSTAAGFSVRSDRAQGFEPQGFCWSSGASISRSLELIQNKEPSSKHISLCHELHTLFRV 364
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
MWS +++ A+L ++ S F G QQDAQEFL LL + +E + GST
Sbjct: 365 MWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQEL-----ESEGSTR 419
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEA--SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
R L + + + T+ V + IF GQL S V C +C S E FW+L
Sbjct: 420 -----------RILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCVSCNYKSNTIEPFWDL 468
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SL P +R V + F +P+ L E L KF E
Sbjct: 469 SLEFP--------------------ERYHCVEKGF----VPLNQTECLLTEMLAKFTETE 504
Query: 240 TLHN---TCQYCKKQ-----------SDLVKLYEIQRLPPVLILWFKRF---SSNFTQKV 282
L C C + S+ K I RLP VL L KRF N +K+
Sbjct: 505 ALEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKI 564
Query: 283 TSPIKFPREGLDMEYYISAS--GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
+ F + L ME Y + + YDL AV H GK GHYTAYC G
Sbjct: 565 GVHVVFD-QVLTMEPYCCGDMLSSLDKDTFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGG 623
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
W +D S +D +VE + AYIL Y RR
Sbjct: 624 FWVHCND---SKLDVCSVEEV-CKTQAYILFYTRR 654
>gi|150010639|ref|NP_056091.1| ubiquitin carboxyl-terminal hydrolase 22 [Homo sapiens]
gi|78103328|sp|Q9UPT9.2|UBP22_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|307684440|dbj|BAJ20260.1| ubiquitin specific peptidase 22 [synthetic construct]
Length = 525
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|326930344|ref|XP_003211307.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Meleagris
gallopavo]
Length = 906
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 125/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ S +
Sbjct: 435 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSAIYQSVPAK 491
Query: 207 T-------------------------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
T S + FW PV TL +CL FF + L
Sbjct: 492 TGACGDNYASQGWIAFIMEYIRRFVVSCIPSWFWG---PVV----TLEDCLAAFFAADEL 544
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+
Sbjct: 545 KGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDL 604
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+++ V TYDL +V H G TA GHY AYC+ G+WY +DD V+ V
Sbjct: 605 RPFLAKEC--VSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHE 661
Query: 356 QTVESAEAEHGAYILVYQR 374
V++AE AY+L Y++
Sbjct: 662 TVVQNAE----AYVLFYRK 676
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSGNLVLNTKAIL-LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ L ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPSSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|432884788|ref|XP_004074587.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Oryzias
latipes]
Length = 926
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 129/267 (48%), Gaps = 48/267 (17%)
Query: 139 EKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS 198
+K Q+ SV SDIF G + S V+C C R ST E F +LSLP+P G +L SS
Sbjct: 449 KKKQSHYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSS 505
Query: 199 ------VRCSNCKRT-------------------STVYEIFWELSLPVPPGGGTLYECLN 233
V+ C + S + FW + TL +CL
Sbjct: 506 IHQNLPVKTGVCPDSYSSQGWISFIMDSIRRFVVSCIPTWFWGPMV-------TLEDCLA 558
Query: 234 KFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIK 287
FF + L +C+ CKK + +K ++ +LP +L + KRF ++ K++S +
Sbjct: 559 AFFAADELKGDNMYSCERCKKLRNGIKYCKVLKLPEILCIHLKRFRHEVMYSFKISSHVS 618
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP EGLDM +++ + TYDL +V H G TA GHY AYC+ G+WY +DD
Sbjct: 619 FPLEGLDMRPFLAKESPSQVT--TYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDD 675
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQR 374
V+ V V++AE AY+L Y++
Sbjct: 676 QYVTEVHETVVQNAE----AYVLFYRK 698
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L+ + D K L + + +W
Sbjct: 147 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDCSGLVRTDKKP--ALCKSYQKLISELW 204
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 205 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 252
>gi|325096103|gb|EGC49413.1| ubiquitin-specific protease [Ajellomyces capsulatus H88]
Length = 1099
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 178/414 (42%), Gaps = 88/414 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+N+++QCLS T + D H + SQG L N ++
Sbjct: 726 GLVNMGSTCYMNAIIQCLSVTVQLTKFFI--DNRFHSQVQKNWKGSQGILPGLFANLVRS 783
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + V+ + + ++ G++QQDA+EF LL L+E+ + +N +
Sbjct: 784 LWKNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNL---NWNRTPL 840
Query: 122 SNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+++Q + W ++ E S S +F GQ S +RC C+RTST
Sbjct: 841 RPLTTEQEMRREQMPIEQVSTIEWNRYCHREYSYISSLFAGQHASRLRCRTCRRTST--- 897
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYE 230
YE F+ +S+ +P G G LY+
Sbjct: 898 -----------------------------------TYEAFFSISVEIPSSPASGAGDLYQ 922
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNF--TQKVT 283
CLN + E L C YC+ + + K + R P L++ FKRFS S + T+K+
Sbjct: 923 CLNSYCKEEMLSGDEVWKCPYCRSEREATKQIILTRAPRFLVIHFKRFSLSRYQQTRKIH 982
Query: 284 SPIKFPREGLDMEYYI-------SASGRRVESR-------------YTYDLCAVSNHIGK 323
+PI FP GLD+ ++ SA R + Y Y+ + HIG
Sbjct: 983 TPINFPITGLDITSFMAPPIRTSSAPNGRADGHNKQLQPELATTPPYIYNAYGIVRHIGS 1042
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
++ GHY + R + G W +DD V+ + ++ A++ AY++ Y+R+
Sbjct: 1043 SSSEGHYISLVRDDRRGCWRKFDDQRVTDFNPMGLKPADSLQNDQAYLVFYERK 1096
>gi|426349090|ref|XP_004042152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Gorilla
gorilla gorilla]
Length = 525
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|240278037|gb|EER41544.1| ubiquitin C-terminal hydrolase [Ajellomyces capsulatus H143]
Length = 1082
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 178/414 (42%), Gaps = 88/414 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+N+++QCLS T + D H + SQG L N ++
Sbjct: 709 GLVNMGSTCYMNAIIQCLSVTVQLTKFFI--DNRFHSQVQKNWKGSQGILPGLFANLVRS 766
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + V+ + + ++ G++QQDA+EF LL L+E+ + +N +
Sbjct: 767 LWKNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNL---NWNRTPL 823
Query: 122 SNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+++Q + W ++ E S S +F GQ S +RC C+RTST
Sbjct: 824 RPLTTEQEMRREQMPIEQVSTIEWNRYCHREYSYISSLFAGQHASRLRCRTCRRTST--- 880
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYE 230
YE F+ +S+ +P G G LY+
Sbjct: 881 -----------------------------------TYEAFFSISVEIPSSPASGAGDLYQ 905
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNF--TQKVT 283
CLN + E L C YC+ + + K + R P L++ FKRFS S + T+K+
Sbjct: 906 CLNSYCQEEMLSGDEVWKCPYCRSEREATKQIILTRAPRFLVIHFKRFSLSRYQQTRKIH 965
Query: 284 SPIKFPREGLDMEYYI-------SASGRRVESR-------------YTYDLCAVSNHIGK 323
+PI FP GLD+ ++ SA R + Y Y+ + HIG
Sbjct: 966 TPINFPITGLDITSFMAPPIRTSSAPNGRADGHNKQLQPELATTPPYIYNAYGIVRHIGS 1025
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
++ GHY + R + G W +DD V+ + ++ A++ AY++ Y+R+
Sbjct: 1026 SSSEGHYISLVRDDRRGCWRKFDDQRVTDFNPMGLKPADSLQNDQAYLVFYERK 1079
>gi|427785435|gb|JAA58169.1| Putative ubiquitin carboxyl-terminal hydrolase 20 [Rhipicephalus
pulchellus]
Length = 834
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 124/248 (50%), Gaps = 28/248 (11%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP-----------GGGT--LYEC 193
S+ SD+F G++ SSV+C C ST E F +LSLP+P G GT +
Sbjct: 355 SIVSDVFDGRILSSVQCLTCDTVSTTRETFQDLSLPIPSRDHLAVLHAAQGSGTTGVPGA 414
Query: 194 QLRSSVRCSNCKRTSTVYEIF-WELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYC 248
LR ++ + + +F W P G L +CL FF+ + L +C C
Sbjct: 415 HLRGALEPQQGWLSWILGRMFSWVFGWLWGP-GVALQDCLAAFFSADELKGDNMYSCDKC 473
Query: 249 KKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRV 306
K + +K + +LP VL + KRF F+ K++S + FP EGLDM ++ + R
Sbjct: 474 CKLRNGIKYSRVLQLPEVLCIHLKRFRHEVMFSSKISSYVSFPLEGLDMAPFLHSECPR- 532
Query: 307 ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHG 366
S TYDL AV H G TA +GHYT Y +WY +DD V+ V+ Q V++ E
Sbjct: 533 -SATTYDLMAVICHHG-TAGFGHYTTYALNHLNDQWYEFDDQYVTSVEPQVVQNCE---- 586
Query: 367 AYILVYQR 374
AY+L Y++
Sbjct: 587 AYVLFYRK 594
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P N L+ + D K L + + ++ MW
Sbjct: 144 GLTGLQNLGNTCYMNAALQALSNCPQLTNFFLDCGSLVQCDKKP--GLSKSYMRLVREMW 201
Query: 64 SSGNLV-LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV 111
+ I ++ F G QQDAQEFL L L+EE K
Sbjct: 202 HKRRPSYVVPSGIAYGIKMVYPVFRGYSQQDAQEFLRCFLDQLHEELKA 250
>gi|119623000|gb|EAX02595.1| hCG28655 [Homo sapiens]
Length = 556
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 205 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 263
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 264 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 320
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 321 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 362
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 363 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 408
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 409 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 467
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 468 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 525
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 526 DDAIITKASIKDVLDSE----GYLLFYHKQ 551
>gi|395856749|ref|XP_003800781.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Otolemur garnettii]
Length = 725
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 374 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 432
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 433 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 489
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 490 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 531
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 532 PGSSTPFWPLSPGSEGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 577
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 578 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 636
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 637 FMASSKESRMNGQYQQPVDSLSSDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 694
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 695 DDAIITKASIKDVLDSE----GYLLFYHKQ 720
>gi|225557399|gb|EEH05685.1| ubiquitin carboxyl-terminal hydrolase [Ajellomyces capsulatus G186AR]
Length = 1097
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 178/414 (42%), Gaps = 88/414 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+N+++QCLS T + D H + SQG L N ++
Sbjct: 724 GLVNMGSTCYMNAIIQCLSVTVQLTKFFI--DNRFHSQVQKNWKGSQGILPGLFANLVRS 781
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + V+ + + ++ G++QQDA+EF LL L+E+ + +N +
Sbjct: 782 LWKNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNL---NWNRTPL 838
Query: 122 SNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+++Q + W ++ E S S +F GQ S +RC C+RTST
Sbjct: 839 RPLTTEQEMRREQMPIEQVSTIEWNRYCHREYSYISSLFAGQHASRLRCRTCRRTST--- 895
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYE 230
YE F+ +S+ +P G G LY+
Sbjct: 896 -----------------------------------TYEAFFSISVEIPSSPASGAGDLYQ 920
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNF--TQKVT 283
CLN + E L C YC+ + + K + R P L++ FKRFS S + T+K+
Sbjct: 921 CLNSYCQEEMLSGDEVWKCPYCRSEREATKQIILTRAPRFLVIHFKRFSLSRYQQTRKIH 980
Query: 284 SPIKFPREGLDMEYYI-------SASGRRVESR-------------YTYDLCAVSNHIGK 323
+PI FP GLD+ ++ SA R + Y Y+ + HIG
Sbjct: 981 TPINFPITGLDITSFMAPPIRTSSAPNGRADGNNKQLQPELATTPPYIYNAYGIVRHIGS 1040
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
++ GHY + R + G W +DD V+ + ++ A++ AY++ Y+R+
Sbjct: 1041 SSSEGHYISLVRDDRRGCWRKFDDQRVTDFNPMGLKPADSLQNDQAYLVFYERK 1094
>gi|380784219|gb|AFE63985.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|380784221|gb|AFE63986.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416981|gb|AFH31704.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416983|gb|AFH31705.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939714|gb|AFI33462.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939716|gb|AFI33463.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
Length = 525
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|449281395|gb|EMC88475.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Columba livia]
Length = 424
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + +
Sbjct: 73 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSC-LVCEMSTLFQEFY 131
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 132 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 188
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 189 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 230
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 231 PGSSTPFWPLSPGSDGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 276
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 277 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 335
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 336 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 393
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 394 DDAIITKASIKDVLDSE----GYLLFYHKQ 419
>gi|449475954|ref|XP_002188777.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Taeniopygia guttata]
Length = 476
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 169/391 (43%), Gaps = 63/391 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S + + F + +
Sbjct: 125 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQE--F 182
Query: 64 SSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG +
Sbjct: 183 YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKAN 239
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
N + + IF G L+S V C C ST + FW++SL
Sbjct: 240 NPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLD 281
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+P + S N + + G TL +CL +F E L
Sbjct: 282 LPGSSTPFWPLSPGSDGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLG 327
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDME 296
++ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 328 SSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMT 386
Query: 297 YYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 387 PFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFK 444
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 445 CDDAIITKASIKDVLDSE----GYLLFYHKQ 471
>gi|426238935|ref|XP_004013392.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Ovis aries]
Length = 606
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 255 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 313
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 314 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 370
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 371 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 412
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 413 PGSSTPFWPLSPGSESSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 458
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 459 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 517
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 518 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 575
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ V +E Y+L Y ++
Sbjct: 576 DDAIITKASIADVLDSE----GYLLFYHKQ 601
>gi|21429716|gb|AAM50536.1| AT06247p [Drosophila melanogaster]
Length = 990
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRS-SVRCSNCK 205
S+ SD+F G+L SSV+C C R ST E F +LSLP+P Q S SV+ N
Sbjct: 322 SIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAA 381
Query: 206 RTSTVYEIFW------ELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLV 255
TS W L + TLY+C+ FF+ + L +C+ C K +
Sbjct: 382 ETSARTNEGWLSWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGI 441
Query: 256 KLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYD 313
K + LP VL + KRF ++ ++ K++S + FP EG DM YI + + Y+
Sbjct: 442 KYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVA--IYN 499
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
L +V H G T GHYT + R G+WY +DD V+ V ++ V+S + AY+L Y
Sbjct: 500 LSSVICHHG-TVGGGHYTCFARNALNGKWYEFDDQFVTEVSSELVQSCQ----AYVLFYH 554
Query: 374 R 374
+
Sbjct: 555 K 555
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQ-----GQLVDALVN 57
GL G+ N NTCY+NS LQ LSN P + +N D+ + +S G L +
Sbjct: 93 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKPGGLAKSYRR 152
Query: 58 FMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
M+ +W + + + IL +R+ F G QQ D QEFL + L+EE
Sbjct: 153 LMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEE 206
>gi|34365073|emb|CAE45893.1| hypothetical protein [Homo sapiens]
Length = 453
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 102 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 160
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 161 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 217
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 218 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 259
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 260 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 305
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 306 SATIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 364
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 365 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 422
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 423 DDAIITKASIKDVLDSE----GYLLFYHKQ 448
>gi|355753836|gb|EHH57801.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca
fascicularis]
Length = 469
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 118 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 176
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 177 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 233
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 234 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 275
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 276 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 321
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 322 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 380
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 381 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 438
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 439 DDAIITKASIKDVLDSE----GYLLFYHKQ 464
>gi|398399006|ref|XP_003852960.1| hypothetical protein MYCGRDRAFT_85668 [Zymoseptoria tritici IPO323]
gi|339472842|gb|EGP87936.1| hypothetical protein MYCGRDRAFT_85668 [Zymoseptoria tritici IPO323]
Length = 820
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 164/415 (39%), Gaps = 89/415 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNT---------PAFRNVLLNEDIPIHPDSKSQGQLVDALVN 57
G+ N G+TCY+N+ LQ LS T ++N++ E+ S+G L + N
Sbjct: 437 GLKNFGSTCYMNATLQALSATIPLTILVMDDGYKNMVQKENW-----KGSRGLLPEMYSN 491
Query: 58 FMKMMWSSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV----V 112
++ +W + + T R + D +QQ+D QEF +++ L+E+
Sbjct: 492 VVRELWRGNVDFIKPTTFFNFCGRLNSTFKDPSQQEDTQEFFSFVVDCLHEDFNAHWAKP 551
Query: 113 PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
P + T + A W+++ E S + IF GQ S V
Sbjct: 552 PLRELTPAEEATRERMPRLLVAKTEWDRYTHRENSFLTSIFYGQQSSRV----------- 600
Query: 173 YEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYEC 231
RC+ C TST Y+ + L + +P L +C
Sbjct: 601 ---------------------------RCTVCNATSTQYDPWALLQVEIPEAREAQLQDC 633
Query: 232 LNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN----FTQKVT 283
L F E L TC CK K I R PP L++ KRF ++ +K+
Sbjct: 634 LRNHFGDELLDADNQWTCTNCKVPRRATKKLTITRAPPFLVIGLKRFKTHPRTGEQRKIH 693
Query: 284 SPIKFPREGLDM-------------EYYISASGRR--------VESRYTYDLCAVSNHIG 322
+ ++FP EGLDM E +S G R + Y YD AV H G
Sbjct: 694 TNVRFPLEGLDMGEFILPPPSLQEAEIIVSQHGGREALKTDPALTPPYIYDAYAVVRHQG 753
Query: 323 KTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV--ESAEAEHGAYILVYQRR 375
T GHYTA R G W ++DTV + + + + A GAY++ +QRR
Sbjct: 754 DTTRSGHYTAAVRDRARGCWRFFNDTVSNDFRPEGLGRDKALDNEGAYLVFWQRR 808
>gi|281312477|sp|A5PN09.1|UBP20_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
Length = 911
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 53/288 (18%)
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
G TY+ ++ + S + +K Q+ SV SDIF G + S V+C C R ST E F
Sbjct: 419 GPTYTFKKAQMLLSTK-----KKKQSRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQ 473
Query: 178 ELSLPVPPGGGTLYECQLRSSVR---------CSN--------------CKR--TSTVYE 212
+LSLP+P G +L SS+ C++ +R S +
Sbjct: 474 DLSLPIP---GKEDLAKLHSSIHQSAPVKAGVCTDGYAAQGWISYIMDSIRRFVVSCIPS 530
Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLI 268
FW + TL +CL FF + L +C+ CKK + VK ++ RLP +L
Sbjct: 531 WFWGPMV-------TLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILC 583
Query: 269 LWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
+ KRF ++ K+ S + FP EGLD++ +++ TYDL +V H G TA
Sbjct: 584 IHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESP--SQITTYDLLSVICHHG-TAG 640
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHY AYC+ G+WY +DD V+ V V++AE AY+L Y++
Sbjct: 641 SGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE----AYVLFYRK 684
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P + + D K L + + +W
Sbjct: 146 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFQDCSGLVRTDKKP--ALCKSYQKLISELW 203
Query: 64 SSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
L ++ F G QQD QEFL L+ L+EE K
Sbjct: 204 HKKRPSYVVPTTLFHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 251
>gi|118097855|ref|XP_414805.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A [Gallus
gallus]
Length = 490
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 169/391 (43%), Gaps = 63/391 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S + + F + +
Sbjct: 139 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQE--F 196
Query: 64 SSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG +
Sbjct: 197 YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKAN 253
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
N + + IF G L+S V C C ST + FW++SL
Sbjct: 254 NPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLD 295
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+P + S N + + G TL +CL +F E L
Sbjct: 296 LPGSSTPFWPLSPGSDGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLG 341
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDME 296
++ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 342 SSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMT 400
Query: 297 YYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 401 PFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFK 458
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 459 CDDAIITKASIKDVLDSE----GYLLFYHKQ 485
>gi|51593607|gb|AAH80737.1| Ubiquitin specific peptidase 22 [Mus musculus]
Length = 525
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 168/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC+++ ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMDCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520
>gi|403275468|ref|XP_003929464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Saimiri
boliviensis boliviensis]
Length = 555
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 204 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 262
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 263 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 319
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 320 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 361
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + G TL +CL +F E L +
Sbjct: 362 PGSSTPFWPLSPGSEGNVVNGESHVA--------------GTTTLTDCLRRFTRPEHLGS 407
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 408 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 466
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 467 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 524
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 525 DDAIITKASIKDVLDSE----GYLLFYHKQ 550
>gi|262118284|ref|NP_001160039.1| ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
gi|229558005|sp|P0C8Z3.1|UBP22_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|296476572|tpg|DAA18687.1| TPA: ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
Length = 514
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 163 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 221
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 222 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 278
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 279 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 320
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 321 PGSSTPFWPLSPGSESSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 366
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 367 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 425
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 426 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 483
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ V +E Y+L Y ++
Sbjct: 484 DDAIITKASIADVLDSE----GYLLFYHKQ 509
>gi|432956682|ref|XP_004085735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like, partial
[Oryzias latipes]
Length = 421
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 163/391 (41%), Gaps = 65/391 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ + S LV + + +
Sbjct: 72 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKC--EMASSSCLVCEMSQLFQEFY 129
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K +G SN
Sbjct: 130 SGHRSPHVPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK----DDSGKRTSN 185
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 186 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 227
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT-LYECLNKFFNGETLH 242
P + V L+ P G T L +CL +F E L
Sbjct: 228 PGSSTPFWPLSPEGEVS---------------ALNRETPGSGATALTDCLRRFTRPEHLG 272
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDME 296
++ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 273 SSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMT 331
Query: 297 YYISASGRR------------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++++S + S Y L AV NH G T GHYT + R+ +W+
Sbjct: 332 PFMASSKEKRMNGQNQQTADAFSSDNRYSLFAVVNHQG-TLESGHYTTFIRQH-KDQWFK 389
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD V++ + V +E Y+L Y ++
Sbjct: 390 CDDAVITKASLEEVLDSE----GYLLFYHKQ 416
>gi|22026877|ref|NP_610943.2| CG8494 [Drosophila melanogaster]
gi|21392026|gb|AAM48367.1| LD43649p [Drosophila melanogaster]
gi|21645420|gb|AAF58273.2| CG8494 [Drosophila melanogaster]
Length = 975
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRS-SVRCSNCK 205
S+ SD+F G+L SSV+C C R ST E F +LSLP+P Q S SV+ N
Sbjct: 307 SIISDVFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPNRDFLNVLHQTHSLSVQSLNAA 366
Query: 206 RTSTVYEIFW------ELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLV 255
TS W L + TLY+C+ FF+ + L +C+ C K +
Sbjct: 367 ETSARTNEGWLSWMWNMLRSWIYGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGI 426
Query: 256 KLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYD 313
K + LP VL + KRF ++ ++ K++S + FP EG DM YI + + Y+
Sbjct: 427 KYSRVLTLPEVLCIHLKRFRNDLSYSSKISSDVYFPLEGFDMRPYIHKDCKSEVA--IYN 484
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
L +V H G T GHYT + R G+WY +DD V+ V ++ V+S + AY+L Y
Sbjct: 485 LSSVICHHG-TVGGGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQ----AYVLFYH 539
Query: 374 R 374
+
Sbjct: 540 K 540
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-EDIPIHPDSKSQ-----GQLVDALVN 57
GL G+ N NTCY+NS LQ LSN P + +N D+ + +S G L +
Sbjct: 78 GLVGLQNIANTCYMNSALQALSNLPPMTHYFINCSDLVEYIAEQSARRCKPGGLAKSYRR 137
Query: 58 FMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
M+ +W + + + IL +R+ F G QQ D QEFL + L+EE
Sbjct: 138 LMQEIWQDVDDPKEFIAPRGILYGIRTVHPMFRGYQQHDTQEFLRCFMDQLHEE 191
>gi|334333006|ref|XP_001370855.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Monodelphis domestica]
Length = 880
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + +
Sbjct: 529 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSC-LVCEMSTLFQEFY 587
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 588 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 644
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 645 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 686
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 687 PGSSTPFWPLSPGSDGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 732
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 733 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 791
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 792 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 849
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 850 DDAIITKASIKDVLDSE----GYLLFYHKQ 875
>gi|225709338|gb|ACO10515.1| Ubiquitin carboxyl-terminal hydrolase 22 [Caligus rogercresseyi]
Length = 484
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 161/386 (41%), Gaps = 72/386 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC+++ ++Q L +TP R+ L++ K+ +V + + +
Sbjct: 152 GLRGLINLGNTCFMSCIIQSLIHTPLLRDYFLSDRHRCMFQGKNDC-MVCEVSRLFQEFY 210
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S + L +L ++ G +QQDA EF + L L+
Sbjct: 211 SGSKVPLVPHVLLHMTWTHAHHLAGYEQQDAHEFFIATLDLLHR---------------- 254
Query: 124 TSSKQVGSFRALHYWEKFQTTEAS---VFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
H K A+ + IF G+L+S V C NCK ST + FW++S
Sbjct: 255 ------------HLIHKTTVNPANCDCIVDTIFTGKLQSDVVCQNCKGVSTTIDPFWDIS 302
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L +P +T S +L+ CL +F E
Sbjct: 303 LDLP----------------------AATPSSSNSSSSSSSSNHVISLHNCLERFTKPEH 340
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLD 294
L ++ C C+ + K +++LP V KRF SS F +K+++ I FP E LD
Sbjct: 341 LGSSAKIKCSNCQTYQESTKQLTMKKLPIVASFHLKRFEHSSRFHKKISTRIAFP-EILD 399
Query: 295 MEYYISA----SGRRVES-RYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
M ++S S V S YTY L AV NH G GHYT++ R+ RWY +D
Sbjct: 400 MSPFVSHIRNNSASPVNSGSYTYTLFAVINHTGNIEA-GHYTSFVRQH-RDRWYRCNDHQ 457
Query: 350 VSPVDAQTVESAEAEHGAYILVYQRR 375
+ P D V +E Y+L Y ++
Sbjct: 458 IVPADLSDVLGSE----GYLLFYHKQ 479
>gi|451851059|gb|EMD64360.1| hypothetical protein COCSADRAFT_90126 [Cochliobolus sativus ND90Pr]
Length = 1059
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 165/411 (40%), Gaps = 81/411 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLL----NEDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N G TCY+NSV+QCLS ++ L D+ ++G L +A + +
Sbjct: 679 GLLNFGVTCYMNSVVQCLSGHLLLSDLFLTGRYQRDLQRDNWKGTKGILPEAYATLLSNL 738
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV----PDQYNG 118
+ + + ++ ++QQDA+EFL ++L ++E+ + P +
Sbjct: 739 YKGDVSSVRPSTFRRICGHFNSQWGIDEQQDAKEFLEFVLDYMHEDMNLTWNKPPLKPLT 798
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + + A+ W ++Q + SV +F GQ S +
Sbjct: 799 DQEELTRERFPRQYSAMIEWRRYQHRDMSVIGGLFAGQHASQLT---------------- 842
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
C C TST YE FW +S+ +P G L +CL +
Sbjct: 843 ----------------------CQTCGVTSTTYEAFWSISVEIPREGQCDLRQCLESYCA 880
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPR 290
E L C CKK + VK I R P L++ FKRFS++ T+ KV +P+ FP
Sbjct: 881 PEHLAGDELWRCPRCKKDREAVKKITITRAPDTLVIHFKRFSASRTETARKVRTPVHFPL 940
Query: 291 EGLDM------------EYYISASGRR-------------VESRYTYDLCAVSNHIGKTA 325
+ LD+ E +++ R + Y Y+ AV HIG T
Sbjct: 941 QRLDIGPFVEPPMTPEQEAFVAQKARDGPAQLAGVKADPTMNGPYVYNAYAVIWHIGATL 1000
Query: 326 LYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV--ESAEAEHGAYILVYQR 374
GHY A+ + + G W ++D + D + S AYI+ Y+R
Sbjct: 1001 GSGHYIAFVKDKSRGCWRSFNDDKIQDFDPGNLPANSRLQNEKAYIVFYER 1051
>gi|359319450|ref|XP_851968.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Canis lupus
familiaris]
Length = 474
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 123 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 181
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 182 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 238
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 239 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 280
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + L S S V G TL +CL +F E L +
Sbjct: 281 PGSSTPFWP--LSPGSEGSVVNGESHV------------AGTTTLTDCLRRFTRPEHLGS 326
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 327 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 385
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 386 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 443
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 444 DDAIITKASIEDVLDSE----GYLLFYHKQ 469
>gi|410980119|ref|XP_003996426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Felis catus]
Length = 470
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 119 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 177
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 178 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 234
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 235 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 276
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + L S S V G TL +CL +F E L +
Sbjct: 277 PGSSTPFWP--LSPGSEGSVVNGESHV------------AGTTTLTDCLRRFTRPEHLGS 322
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 323 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 381
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 382 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 439
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 440 DDAIITKASIEDVLDSE----GYLLFYHKQ 465
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 150/372 (40%), Gaps = 72/372 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++NS LQCL+ TP N L++ Q ++ +L + + +G
Sbjct: 108 GLVNLGNTCFLNSALQCLTYTPPLANYLMSNQHRAQCRVNGQFCMLCSLQHHQSASFGNG 167
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+ IL LR K +Q+DA EF+ Y + A+
Sbjct: 168 GKSIRPMNILKNLRIIAKHLQFGRQEDAHEFIRYSVDAM--------------------- 206
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
Q L T ++ IF G LRS V+C C+ S ++ F +LSL +
Sbjct: 207 -QRSCLFGLPSKLDIHTKTTTLVYQIFGGYLRSRVKCRQCRAVSDTFDPFLDLSLDI--- 262
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN--- 243
K+ S L +CL F E LH
Sbjct: 263 -----------------NKQESN-----------------DLRKCLENFVKPELLHGDNL 288
Query: 244 -TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISAS 302
C CKK K + I R P VL + KRFSS K+ I +P + L++ Y S+
Sbjct: 289 YKCYQCKKSVPASKTFSIHRPPNVLTVQLKRFSSFMGNKINRDITYPSK-LNLGPYTSSD 347
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
R E YDL AV H G + GHY AY + G+WY ++D+ V+ V + + +
Sbjct: 348 --RNEG-PIYDLYAVLVHSGFSCNSGHYYAYA-KAANGQWYCFNDSSVNQVSSHQALNQQ 403
Query: 363 AEHGAYILVYQR 374
AY+L Y R
Sbjct: 404 ----AYLLFYHR 411
>gi|147904969|ref|NP_001090240.1| ubiquitin carboxyl-terminal hydrolase 22-B [Xenopus laevis]
gi|50418363|gb|AAH78033.1| Usp27x protein [Xenopus laevis]
Length = 572
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 162/389 (41%), Gaps = 59/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S + LV + + +
Sbjct: 221 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSC-LVCEMSTLFQEFY 279
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 280 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 336
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 337 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 378
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 379 PGSSTPFWPLSPGSDAGVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 424
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E M +
Sbjct: 425 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMMPF 484
Query: 298 YISASGRRVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
S+ R+ +Y Y L AV NH G T GHYT++ R+ +W+ D
Sbjct: 485 MASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKCD 542
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + V +E Y+L Y ++
Sbjct: 543 DAIITKASIKDVIDSE----GYLLFYHKQ 567
>gi|357626409|gb|EHJ76510.1| putative Ubiquitin carboxyl-terminal hydrolase 22 [Danaus
plexippus]
Length = 487
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 165/392 (42%), Gaps = 92/392 (23%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ---LVDALVNFMK 60
GL G+ N G+TC++N ++Q L +TP R+ L E K+QG LV + +
Sbjct: 156 GLRGLQNLGSTCFMNCIVQTLIHTPLLRDYFLGEK----HKCKTQGSGKCLVCEVSKLFQ 211
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+S L +L + ++ + G +QQDA EF + L L+ NG
Sbjct: 212 EFYSGAKTPLTLHRLLHLIWTHARHLAGYEQQDAHEFFIATLDVLHRHC------MNG-- 263
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+T K+ G RC NC + +IF
Sbjct: 264 VEDTEKKENG-------------------------------RC-NC----IIDQIF---- 283
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
GG L+S V C++C ST + FW++SL V G G+L CL +F E
Sbjct: 284 ----TGG-------LQSDVVCTSCSGVSTTIDPFWDISLDV-AGPGSLQACLERFTRAEH 331
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLD 294
L + C C+ + K ++ LP V KRF SS +K+++ + FP E LD
Sbjct: 332 LGSAAKIKCSNCRAYRESTKQLTLETLPIVASFHLKRFEHSSQIDRKISAFVSFPAE-LD 390
Query: 295 MEYYISASGRRVESRYT------------YDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
M ++S R VE+ Y L AV NH+G GHYTAY R+ G W
Sbjct: 391 MTPFMSTHRRAVEAADNNNAPEGVFEDNRYSLFAVVNHLGSLDA-GHYTAYV-RQMKGSW 448
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ DD +++ + V +E Y+L Y +
Sbjct: 449 FKCDDHMITRASLREVLDSE----GYLLFYHK 476
>gi|158966727|ref|NP_957281.2| ubiquitin carboxyl-terminal hydrolase 20 [Danio rerio]
gi|148725228|emb|CAN88088.1| ubiquitin specific protease 20 [Danio rerio]
gi|148725501|emb|CAN88765.1| ubiquitin specific protease 20 [Danio rerio]
Length = 913
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 129/267 (48%), Gaps = 48/267 (17%)
Query: 139 EKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS 198
+K Q+ SV SDIF G + S V+C C R ST E F +LSLP+P G +L SS
Sbjct: 435 KKKQSRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSS 491
Query: 199 VRCS-----------------------NCKR--TSTVYEIFWELSLPVPPGGGTLYECLN 233
+ S + +R S + FW + TL +CL
Sbjct: 492 IHQSAPVKAGVCTDGYAAQGWISYIMDSIRRFVVSCIPSWFWGPMV-------TLEDCLA 544
Query: 234 KFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIK 287
FF + L +C+ CKK + VK ++ RLP +L + KRF ++ K+ S +
Sbjct: 545 AFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVS 604
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP EGLD++ +++ TYDL +V H G TA GHY AYC+ G+WY +DD
Sbjct: 605 FPLEGLDLKPFLAKESP--SQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDD 661
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQR 374
V+ V V++AE AY+L Y++
Sbjct: 662 QYVTEVHETVVQNAE----AYVLFYRK 684
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P + + D K L + + +W
Sbjct: 146 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFQDCSGLVRTDKKP--ALCKSYQKLISELW 203
Query: 64 SSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
L ++ F G QQD QEFL L+ L+EE K
Sbjct: 204 HKKRPSYVVPTTLFHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 251
>gi|410979290|ref|XP_003996018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Felis catus]
Length = 913
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 123/254 (48%), Gaps = 40/254 (15%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-----------------PGG-G 188
SV SDIF G + S V+C C R ST E F +LSLP+P PG G
Sbjct: 444 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHIYQNVPAKPGACG 503
Query: 189 TLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN--- 243
Y Q + +R S FW PV TL +CL FF + L
Sbjct: 504 DGYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGDNM 556
Query: 244 -TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYIS 300
+C+ CKK + VK ++ RLP +L + KRF ++ K++S + FP EGLD+ +++
Sbjct: 557 YSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLA 616
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V++
Sbjct: 617 KEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQN 673
Query: 361 AEAEHGAYILVYQR 374
AE AY+L Y++
Sbjct: 674 AE----AYVLFYRK 683
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HRKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|351713027|gb|EHB15946.1| Ubiquitin carboxyl-terminal hydrolase 22 [Heterocephalus glaber]
Length = 490
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 169/390 (43%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 139 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 197
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K +
Sbjct: 198 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK-----------GD 246
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S K+ + + + IF G L+S V C C ST + FW++SL +
Sbjct: 247 DSGKKANNPNHCN----------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 296
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + ++ G TL +CL +F E L +
Sbjct: 297 PGSSTQFWPLSPGSEGSMVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 342
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 343 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 401
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 402 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 459
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 460 DDAIITKASIKDVLDSE----GYLLFYHKQ 485
>gi|323309861|gb|EGA63064.1| Doa4p [Saccharomyces cerevisiae FostersO]
Length = 552
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 156/378 (41%), Gaps = 59/378 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 204 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 263
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF +LL L+E+
Sbjct: 264 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 323
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 324 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASXLKCKVCSHTSTTY 383
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+P+P N + T+ + F E + +C N
Sbjct: 384 QPFTVLSIPIPK----------------KNSRNNITIEDCFREFT-----------KCEN 416
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +C+K+ K I RLP LI+ KRF N K + +P
Sbjct: 417 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 472
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 473 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 531
Query: 340 GRWYLYDDTVVSPVDAQT 357
W +DDT PV Q+
Sbjct: 532 KGWLYFDDTKYKPVKXQS 549
>gi|326929002|ref|XP_003210661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Meleagris gallopavo]
Length = 758
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 169/391 (43%), Gaps = 63/391 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S + + F + +
Sbjct: 407 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQE--F 464
Query: 64 SSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG +
Sbjct: 465 YSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKAN 521
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
N + + IF G L+S V C C ST + FW++SL
Sbjct: 522 NPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLD 563
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+P + S N + + G TL +CL +F E L
Sbjct: 564 LPGSSTPFWPLSPGSDGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLG 609
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDME 296
++ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 610 SSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMT 668
Query: 297 YYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 669 PFMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFK 726
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 727 CDDAIITKASIKDVLDSE----GYLLFYHKQ 753
>gi|440907885|gb|ELR57973.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Bos grunniens
mutus]
Length = 468
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 117 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 175
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 176 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 232
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 233 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 274
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 275 PGSSTPFWPLSPGSESSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 320
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 321 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 379
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 380 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 437
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ V +E Y+L Y ++
Sbjct: 438 DDAIITKASIADVLDSE----GYLLFYHKQ 463
>gi|345805954|ref|XP_537816.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Canis lupus
familiaris]
Length = 915
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 123/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 444 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLARLHSAIYQNAPAKPGA 503
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 504 CGDSYAAQGWLAFIMEYIRRFLVSCTPSWFWG---PV----VTLEDCLAAFFVADELKGD 556
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K++S + FP EGLD+ +
Sbjct: 557 NMYSCERCKKLRNGVKYCKVLRLPEILYIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPF 616
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 617 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 673
Query: 359 ESAEAEHGAYILVYQR 374
+SAE AY+L Y++
Sbjct: 674 QSAE----AYVLFYRK 685
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 S--SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HRRRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLCCLMDQLHEELK 248
>gi|148230765|ref|NP_001085912.1| ubiquitin carboxyl-terminal hydrolase 22-A [Xenopus laevis]
gi|82184225|sp|Q6GNI6.1|UB22A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-A; AltName:
Full=Deubiquitinating enzyme 22-A; AltName:
Full=Ubiquitin thioesterase 22-A; AltName:
Full=Ubiquitin-specific-processing protease 22-A
gi|49115779|gb|AAH73524.1| MGC82781 protein [Xenopus laevis]
Length = 523
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S + LV + + +
Sbjct: 172 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSC-LVCEMSTLFQEFY 230
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 231 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 287
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 288 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 329
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 330 PGSSTPFWPLSPGSDAGVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 375
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 376 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 434
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 435 FMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 492
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 493 DDAIITKASIKDVLDSE----GYLLFYHKQ 518
>gi|313246635|emb|CBY35520.1| unnamed protein product [Oikopleura dioica]
Length = 515
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 173/379 (45%), Gaps = 84/379 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSKSQGQLVDALVNFMK--MM 62
G+ N GN+CY+NSVLQCL + + L+ + I+ SK+ G++ +
Sbjct: 208 GLKNIGNSCYLNSVLQCLLHCSPMQAYLIKGKYESEINSSSKTSGKVAKYAAQLFDDLLS 267
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
S+GN L A+ A + F G Q+DAQEFL + L AL+E+ V + + +
Sbjct: 268 GSTGNPALVKGAVSKA----SGLFRGTAQEDAQEFLRWFLEALHEDVCRVRSKPRVTQEA 323
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
++S+ W ++ E S D+ VGQL+S
Sbjct: 324 KSASEA---------WRFYKFREDSSIVDMCVGQLKS----------------------- 351
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
S+ CS C S V++ FW+LSLP+P + +CL +F E +
Sbjct: 352 ---------------SLTCSVCSYVSEVWDPFWDLSLPIPSVARGIDDCLKEFQREEIME 396
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT-QKVTSPIKFPREGLDM 295
+ C+ CKK+ + K + I++ P +L++ KRF S+ ++ +K+T+ I+FP
Sbjct: 397 GSEMPKCEKCKKRRKMSKKFSIEKYPQLLVIHLKRFGDSTGYSRRKITADIRFPE----- 451
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+S G + Y+L +V NH G GHYTA+ + + W+ Y+D+ VS
Sbjct: 452 --MMSMDGNK------YELQSVCNHFGSIGG-GHYTAFGKTQNG--WFDYNDSQVSKT-- 498
Query: 356 QTVESAEAEHGAYILVYQR 374
S+ AY+L Y R
Sbjct: 499 ----SSFQSKDAYLLFYTR 513
>gi|327412316|ref|NP_001192175.1| ubiquitin specific peptidase 22 [Xenopus (Silurana) tropicalis]
Length = 572
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 168/391 (42%), Gaps = 63/391 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S + + + F +
Sbjct: 221 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSCLVCEMSTLFQEFY- 279
Query: 64 SSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
SG+ + LL L ++ + G +QQDA EFL+ L L+ K NG +
Sbjct: 280 -SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKAN 335
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
N + + IF G L+S V C C ST + FW++SL
Sbjct: 336 NPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLD 377
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+P + S N + + G TL +CL +F E L
Sbjct: 378 LPGSSTPFWPLSPGSDSAVVNGESHVS--------------GTTTLTDCLRRFTRPEHLG 423
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDME 296
++ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 424 SSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPWE-LDMT 482
Query: 297 YYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYL 344
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 483 PFMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFK 540
Query: 345 YDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 541 CDDAIITKASIKDVLDSE----GYLLFYHKQ 567
>gi|238477375|sp|Q6DCJ1.2|UB22B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22-B; AltName:
Full=Deubiquitinating enzyme 22-B; AltName:
Full=Ubiquitin thioesterase 22-B; AltName:
Full=Ubiquitin-specific-processing protease 22-B
Length = 523
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 162/389 (41%), Gaps = 59/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S + LV + + +
Sbjct: 172 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSC-LVCEMSTLFQEFY 230
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 231 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 287
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 288 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 329
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 330 PGSSTPFWPLSPGSDAGVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 375
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E M +
Sbjct: 376 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMMPF 435
Query: 298 YISASGRRVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
S+ R+ +Y Y L AV NH G T GHYT++ R+ +W+ D
Sbjct: 436 MASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKCD 493
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + V +E Y+L Y ++
Sbjct: 494 DAIITKASIKDVIDSE----GYLLFYHKQ 518
>gi|431898903|gb|ELK07273.1| Ubiquitin carboxyl-terminal hydrolase 20 [Pteropus alecto]
Length = 889
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 34/252 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSV------R 200
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ +
Sbjct: 442 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSAIYQNVPAK 498
Query: 201 CSNCKRT-------STVYEIFWELSLPVPPGG-----GTLYECLNKFFNGETLHN----T 244
C + + + E + P TL +CL FF + L +
Sbjct: 499 SGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYS 558
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISAS 302
C+ CKK + VK ++ RLP +L + KRF ++ K++S + FP EGLD+ +++
Sbjct: 559 CERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKE 618
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
S TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V+SAE
Sbjct: 619 CTSQIS--TYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTKVHETVVQSAE 675
Query: 363 AEHGAYILVYQR 374
AY+L Y++
Sbjct: 676 ----AYVLFYRK 683
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 125 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 182
Query: 64 SSGNLVLNTKAIL-LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
A L ++ F G QQD QEFL L+ L+EE K
Sbjct: 183 HRKRPSCVVPASLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 230
>gi|145552864|ref|XP_001462107.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429945|emb|CAK94734.1| unnamed protein product [Paramecium tetraurelia]
Length = 602
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 169/434 (38%), Gaps = 113/434 (26%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSK--SQGQLVDALVNFM 59
G+ G+ N GNTCY N + CLS+T + +L+ + I+ SK S+GQ+ + +
Sbjct: 68 GVVGLKNLGNTCYFNCAIHCLSHTQPLLDYMLSRVFEKEINKISKLGSRGQVTECFAQLL 127
Query: 60 KMMWS---SGNLVLNTKAILLALRSYTKKF----------------DGN------QQQDA 94
+W S + +N ++ + ++ K++ D N +Q+D
Sbjct: 128 SDIWKDERSIGMSINQMSLSMDMQKKQKQYENWVDPLRNTRRDLKSDVNYQHIQLEQEDC 187
Query: 95 QEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFR---ALHYWEKFQTTEASVFSD 151
QE L YLL ++E+ +G R A W + S+ D
Sbjct: 188 QELLSYLLDMIHEDLNRC-----KKKEIIKEKDYIGEPREEWAAESWGEHLKINKSIVVD 242
Query: 152 IFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVY 211
+F GQL +S V C C S +
Sbjct: 243 LFQGQL--------------------------------------KSKVECKTCNYQSHKW 264
Query: 212 EIFWELSLPVPPGGGT----------------------------LYECLNKFFNGETLHN 243
E F L+LP+ L ECL++F ET+
Sbjct: 265 EPFLFLNLPIKQQQQQQQQQQQKQQSFQSKSLGNSQLKQETICYLTECLDQFQQEETIQW 324
Query: 244 TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDMEYYISA 301
C CK+ D K I +LP +LI+ KRF S T K+T + FP L+M Y +
Sbjct: 325 KCPQCKETRDCKKGIRIWKLPNILIIHLKRFEFGSKQTGKITQKVNFPINDLNMSPYCNE 384
Query: 302 SGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESA 361
+ Y+L AV+ H G + YGHY + C+ +WY+Y+D V + Q +E A
Sbjct: 385 QDNTI-----YNLYAVAQHHG-SLQYGHYISICKHRVDNQWYMYNDDAVFKI--QELEKA 436
Query: 362 EAEHGAYILVYQRR 375
AY+L YQ++
Sbjct: 437 IVNEYAYVLFYQKQ 450
>gi|298706544|emb|CBJ29514.1| similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin
thiolesterase 15) (Ubiquitin-specific processing protease
15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform
11 [Ectocarpus siliculosus]
Length = 1972
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 7/189 (3%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNF 58
PG G+ N GNTCY+NS +QCLS+TP R LL++ ++ + +QG+LV+ +
Sbjct: 998 PGACGLVNVGNTCYLNSAVQCLSHTPLVRAYLLSDMWAAEVNKYNPLGTQGKLVEDFASL 1057
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQYN 117
+K +WS L + L Y +F GN+QQD+QEFL +L AL+E+ +V+ Y
Sbjct: 1058 LKSLWSQEYLCIFPSKFKRGLIKYKPQFAGNEQQDSQEFLAEMLDALHEDVNRVIDKPYV 1117
Query: 118 GSTYSNTSSKQVGSFRAL--HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
+ + ++ S + L W++ SV D+F GQL+ RC+ C + S ++
Sbjct: 1118 AAPDDDDDAESGRSDQDLADEAWDRHVQRNRSVIVDLFQGQLKMECRCTVCNKKSVTFDP 1177
Query: 176 FWELSLPVP 184
F LS+P+P
Sbjct: 1178 FMYLSVPIP 1186
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 31/177 (17%)
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNF 278
G TL +CL+ + ET C C+ V ++ ++P VL++ KRF S+ +
Sbjct: 1789 GLTLEQCLDAYTREETFEEEDSWYCSSCQAHRRGVMKIDLWKMPDVLVIHMKRFHCSARW 1848
Query: 279 TQKVTSPIKFPREGLDMEYYISA-SGRR-----VESRYTYDLCAVSNHIGKTALYGHYTA 332
+K+ + + FP GLDM ++S+ S R ++ YDL V NH+G GHYTA
Sbjct: 1849 REKIRTLVLFPHSGLDMSGFVSSNSAHRNQAGGGQAGMVYDLFGVVNHMGGMT-GGHYTA 1907
Query: 333 YCR---------REGTG-----RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
YCR E TG W +DD V + + S AY+L Y+RR
Sbjct: 1908 YCRSSPCSKDGVEEVTGWGLEHPWLNFDDEFVEEMAPDKIVS----DAAYVLFYRRR 1960
>gi|47215260|emb|CAF96987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 169/418 (40%), Gaps = 95/418 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ K + Q LV M ++
Sbjct: 162 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDR------HKCEMQSNSCLVCEMSQLF 215
Query: 64 SSGNLVLNTKA----------------------------ILLALRSYTKKFDGNQQQDAQ 95
N L T+ +L + ++ + G +QQDA
Sbjct: 216 QEVNAALRTRRTASFPPTQTHDFPLQFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAH 275
Query: 96 EFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVG 155
EFL+ L L+ K NG +N + + IF G
Sbjct: 276 EFLIAALDVLHRHCK----DDNGKKANNPNHCNC------------------IIDQIFTG 313
Query: 156 QLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFW 215
L+S V C C ST + FW++SL +P + N + +T
Sbjct: 314 GLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDASALNGESHAT------ 367
Query: 216 ELSLPVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWF 271
G TL +CL +F E L ++ C C + K +++LP V
Sbjct: 368 --------GATTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHL 419
Query: 272 KRF--SSNFTQKVTSPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAV 317
KRF S+ +K+T+ + FP E LDM ++++S R+ +Y Y L AV
Sbjct: 420 KRFEHSAKLRRKITTYVSFPLE-LDMTPFMASSKESRMNGQYQQIVDPFNNDNKYSLFAV 478
Query: 318 SNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
NH G T GHYT + R+ +W+ DD +++ + V +E Y+L Y ++
Sbjct: 479 VNHQG-TLESGHYTTFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 530
>gi|348521258|ref|XP_003448143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like
[Oreochromis niloticus]
Length = 689
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 174/442 (39%), Gaps = 105/442 (23%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD---SKSQGQLV----- 52
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D+ + S QGQL
Sbjct: 277 VTPGVTGLRNLGNTCYMNSILQVLSHLHVFRECFLRLDLTQALELLASAVQGQLAGKASS 336
Query: 53 ----------------------------------------------DALVNFMKMMWSSG 66
L ++MWS
Sbjct: 337 QPPLIQRKGLQTSLGSGVGLSGGASRARSMELIQPKEPSSKHISLCHELHTLFQVMWSGK 396
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+++ A+L ++ F G QQDAQEFL LL + E + ST +T+S
Sbjct: 397 WALVSPFAMLHSVWQLIPAFRGYAQQDAQEFLCELLDKVQHELE--------STGKHTTS 448
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
V + ++ SV + IF GQL S V C C S E FW+LSL P
Sbjct: 449 AGVPQTQ-----KRLIKQVLSVVNTIFHGQLLSQVTCLACDHRSNTVEPFWDLSLEFP-- 501
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQ 246
Y R S ++C T + + +L G +Y C + C
Sbjct: 502 --ERYHSNSRESAAQASCHLTEMLAKFTETEALE-----GNIYAC-----------DQCN 543
Query: 247 YCKKQ--------SDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLDM 295
+++ ++ K + +LP VL L KRF N +K+ + F + L+M
Sbjct: 544 SARRRTSSKPVILTEAQKQLMVHKLPQVLRLHLKRFRWSGRNHREKIGVHVSFD-QLLNM 602
Query: 296 EYYI--SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
E Y A+G + Y+L AV H GK GHYTAYC G W +D+ ++
Sbjct: 603 EPYCCRDAAGSPRPKHFLYELSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVC 662
Query: 354 DAQTVESAEAEHGAYILVYQRR 375
V A+ AYIL Y +R
Sbjct: 663 SVDEVCRAQ----AYILFYTQR 680
>gi|444725487|gb|ELW66051.1| Ubiquitin carboxyl-terminal hydrolase 49 [Tupaia chinensis]
Length = 459
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 151/365 (41%), Gaps = 71/365 (19%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-----------IPIHPDSKSQG 49
++PG+ G+ N GNTCY+NS+LQ LS+ FR LN D I S
Sbjct: 108 VAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSKTGHLSLELIQNKEPSSKHI 167
Query: 50 QLVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA 109
L L ++MWS +++ A+L ++ S F G QQDAQEFL LL + +E
Sbjct: 168 SLCHELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQEL 227
Query: 110 KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEA-SVFSDIFVGQLRSSVRCSNCKR 168
+ S +++++ + + ++ T + V + IF GQL S V C +C
Sbjct: 228 E-----------SEGAARRI----LIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCVSCNY 272
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
S E FW+LSL P Y C + V P+ L
Sbjct: 273 KSNTIEPFWDLSLEFPER----YHCIEKGFV--------------------PLNQTECLL 308
Query: 229 YECLNKFFNGETLHN---TCQYCKKQ-----------SDLVKLYEIQRLPPVLILWFKRF 274
E L KF E L C C + S+ K I RLP VL L KRF
Sbjct: 309 TEMLAKFTETEALEGRVYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRF 368
Query: 275 ---SSNFTQKVTSPIKFPREGLDMEYYISAS--GRRVESRYTYDLCAVSNHIGKTALYGH 329
N +K+ + F + L ME Y + + YDL AV H GK GH
Sbjct: 369 RWSGRNHREKIGVHVVFD-QVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGH 427
Query: 330 YTAYC 334
YTAYC
Sbjct: 428 YTAYC 432
>gi|242083438|ref|XP_002442144.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
gi|241942837|gb|EES15982.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
Length = 315
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 155/366 (42%), Gaps = 98/366 (26%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPI---HPDSKSQGQLVDALVNFMKMMW 63
G+ N G TCY NS+LQCL +FR + + ++ + HP ++D L +
Sbjct: 25 GLTNLGATCYANSILQCLYMNISFRTGIFSLELEVLKKHP-------VLDQLSRLFAQLH 77
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
SS +++ + AL + D QQD+ EFL L+ L + S
Sbjct: 78 SSKMAFIDSAPFIKAL-----ELDNGVQQDSHEFLTLFLSLLEQ--------------SL 118
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ SK G+ ++ +F G++ RCS+C + S
Sbjct: 119 SHSKVPGA--------------RTIVQHLFCGRVSHVTRCSSCGKDSAA----------- 153
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
S+ E F+EL L + G TL E LN +F+ E L
Sbjct: 154 ------------------------SSKMEDFYELELNIK-GLNTLEESLNDYFSEEALDG 188
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF----SSNFTQKVTSPIKFPREGLDM 295
C+ C+K+ D + +++ LPPV+ KR+ + +K++S FPR+ LD+
Sbjct: 189 ENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSTFSFPRQ-LDL 247
Query: 296 EYYISASGRRVE---SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
G+R+ S TYDL A+ H G A GHY A+ + E G+W+ +DD VS
Sbjct: 248 -------GKRLSNPSSSCTYDLAAILVHKGTGANSGHYVAHIKDESNGQWWEFDDETVSK 300
Query: 353 VDAQTV 358
+ Q V
Sbjct: 301 LGVQPV 306
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 168/391 (42%), Gaps = 66/391 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
G+ N GNTC++N++LQ LSN F RN H ++SQG
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
LV+ + +W + +++ + F G QQQDA EF N
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEF--------NALPF 269
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTT---EASVFSDIFVGQLRSSVRCSNCK 167
P N S Q R L + + ++V + IF G L++ V C C
Sbjct: 270 GPPTLGNFRAVSTVFPAQQFCRRILLCLQVNKCCINGASTVVTAIFGGILQNEVNCLICG 329
Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
S ++ F +LSL +P Q RS KR+ + + PV +
Sbjct: 330 TESRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CS 364
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQK 281
L +CL F + E L T C CKK+ K + IQ+LP VL L KRF ++ K
Sbjct: 365 LRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNK 424
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
V + ++FP GLDM++Y+ YDL AV H G GHYTAY E GR
Sbjct: 425 VDTYVEFPLRGLDMKWYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GR 482
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
W+ ++D+ V+ D +TV A+ AYIL Y
Sbjct: 483 WFHFNDSTVTLTDEETVVKAK----AYILFY 509
>gi|224073512|ref|XP_002198543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Taeniopygia
guttata]
Length = 911
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 125/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ + +
Sbjct: 440 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSAIYQNVPAK 496
Query: 207 T-------------------------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
T S + FW PV TL +CL FF + L
Sbjct: 497 TGACGDNYASQGWIAFIMEYIRRFVVSCIPSWFWG---PV----VTLEDCLAAFFAADEL 549
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+
Sbjct: 550 KGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDL 609
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+++ V TYDL +V H G TA GHY AYC+ G+WY +DD V+ V
Sbjct: 610 RPFLAKEC--VSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHE 666
Query: 356 QTVESAEAEHGAYILVYQR 374
V++AE AY+L Y++
Sbjct: 667 TVVQNAE----AYVLFYRK 681
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSGNLVLNTKAIL-LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ L ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPSSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|410903724|ref|XP_003965343.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Takifugu
rubripes]
Length = 937
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
SV SDIF G + S V+C C R ST E F +LSLP+P G +L SS V+
Sbjct: 468 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSSIHQNLPVK 524
Query: 201 CSNCKRT-------------------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
C + S + FW + TL +CL FF + L
Sbjct: 525 TGTCPDSYNSQGWISYIMDSIRRFVVSCIPTWFWGPMV-------TLEDCLAAFFAADEL 577
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++ +LP +L + KRF ++ K+ S + FP EGL+M
Sbjct: 578 KGDNMYSCERCKKLRNGVKYCKVLKLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNM 637
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ +++ + TYDL +V H G TA GHY AYC+ G+WY +DD V+ V
Sbjct: 638 QPFLAKDSPSQVT--TYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHE 694
Query: 356 QTVESAEAEHGAYILVYQR 374
V++AE AY+L Y++
Sbjct: 695 TVVQNAE----AYVLFYRK 709
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L+ + D K L + + +W
Sbjct: 147 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDCSGLVRTDKKP--ALCKSYQKLISELW 204
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 205 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 252
>gi|348540583|ref|XP_003457767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 1
[Oreochromis niloticus]
Length = 371
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 158/392 (40%), Gaps = 84/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + P K L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRRKE--SLLTCLADLFNSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A L +E K Q NG
Sbjct: 96 KKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKSQERQQNGKLV 155
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N + G W +IF G L + RC NC+ S+ E F +LS+
Sbjct: 156 QNGGGEGEGGKETQQTW----------VHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSV 205
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 206 DVE--------------------QNTSITH-------------------CLRGFSNTETL 226
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 227 CSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 282
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY + G W L+DD +V
Sbjct: 283 LELRLF-NTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVEK 339
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 340 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 370
>gi|410906841|ref|XP_003966900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
Length = 374
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 161/392 (41%), Gaps = 81/392 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + P K L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRRKE--SLLTCLADLFNSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A L +E K Q NG
Sbjct: 96 KKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKSQERQQNGKLV 155
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N GS + T+ + +IF G L + RC NC+ S+ E F +LS+
Sbjct: 156 QNGGGGVGGSDGG-------KETQQTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSV 208
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 209 DVE--------------------QNTSITH-------------------CLRGFSNTETL 229
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 230 CSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 285
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY + G W L+DD +V
Sbjct: 286 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVEK 342
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 343 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 373
>gi|401626323|gb|EJS44275.1| doa4p [Saccharomyces arboricola H-6]
Length = 924
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 162/395 (41%), Gaps = 62/395 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QC+ T + L++ I I+ S+G L + MM
Sbjct: 561 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 620
Query: 63 WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ S + ++ LA S F QQD QEF + L L+E+
Sbjct: 621 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFFLDGLHEDLNQCGSNPP 680
Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
S + ++ S R WE+F TT+ SV D+F GQ S ++C C TST Y
Sbjct: 681 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCCHTSTTY 740
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
+ F LS+PVP N + T+ + F E + +C N
Sbjct: 741 QPFTVLSIPVPK----------------KNSQDKITIEDCFKEFT-----------KCEN 773
Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
+ + L C +CK++ K + RLP LI+ KRF N K +++P
Sbjct: 774 LEVDEQWL---CPHCKRKQPSTKQLTVTRLPRNLIIHLKRF-DNLMNKNNDFVRYPFLLD 829
Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
+ D + + + R + Y+L V+ H G T GHYTAY ++
Sbjct: 830 LTPFWADDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLR 888
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
W +DDT V +T AY+L Y R
Sbjct: 889 KGWLYFDDTKYKSVKNKT---DAINSNAYVLFYHR 920
>gi|193605897|ref|XP_001946935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Acyrthosiphon pisum]
Length = 883
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 26/252 (10%)
Query: 139 EKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS 198
+K+ S+ S+IF G+L SSV+C C R S+ E F +LSLP+P Q SS
Sbjct: 363 KKYHVKYNSIISEIFDGKLLSSVQCLTCNRVSSRVEAFQDLSLPIPTRDHVTVLHQ--SS 420
Query: 199 VRCSNCKRTSTVYE-----IFWELSLPV-----PPGGGTLYECLNKFFNGETLHN----T 244
+ + S +Y IFW + P G L++CL FF+ + L +
Sbjct: 421 TNLCSVHKLSDIYTNQQNWIFWFWDMMYRWFWGPTVG--LHDCLAAFFSADELKGDNMYS 478
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISAS 302
C+ CKK + +K ++ LP VL + KRF F+ K+TS + FP +G+D+ Y+
Sbjct: 479 CEKCKKLRNGIKFSKLLELPEVLCIHLKRFRHELMFSSKITSYVTFPIDGVDLRPYVHKD 538
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
TY L +V H G GHYT Y +WY +DD V+ V A+ V ++E
Sbjct: 539 C--TSQVTTYKLVSVICHHGTIGSGGHYTCYSLNPINEQWYEFDDQCVTLVSAEIVRNSE 596
Query: 363 AEHGAYILVYQR 374
AY+L Y++
Sbjct: 597 ----AYVLFYKK 604
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQG--QLVDALVNFMKM 61
GL G+ N GNTCY+N+ LQ LSNTP + L P +P +S+ L A ++
Sbjct: 146 GLTGLQNIGNTCYMNAALQALSNTPPLTDYFLT-CFPEYPYQQSEKSFSLSKAYHRLIQE 204
Query: 62 MWSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-----VVPDQ 115
+W + + +IL +R+ F G Q D QEFL + L+EE K VVP +
Sbjct: 205 IWHTKRPGYVTPTSILYTMRNAYPMFRGFHQHDTQEFLRCFMDQLHEEMKEPELEVVPSR 264
Query: 116 YNGSTYSNTSSKQ 128
+ +Y TS KQ
Sbjct: 265 RH--SYKGTSRKQ 275
>gi|332230223|ref|XP_003264287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Nomascus leucogenys]
gi|332230225|ref|XP_003264288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Nomascus leucogenys]
Length = 914
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 122/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E+F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVEMFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|260939768|ref|XP_002614184.1| hypothetical protein CLUG_05670 [Clavispora lusitaniae ATCC 42720]
gi|238852078|gb|EEQ41542.1| hypothetical protein CLUG_05670 [Clavispora lusitaniae ATCC 42720]
Length = 831
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 167/423 (39%), Gaps = 93/423 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE-DIPIHPDSK----------SQGQLVDAL 55
G+ N GN+CY+N ++QCL+ TP + + D P K ++G + +
Sbjct: 446 GLTNLGNSCYMNCIIQCLAATPQMTDFFFKKGDKSAEPSYKQHINMNNKLGTKGVITTSY 505
Query: 56 VNFMKMMW--SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE--AKV 111
V + M S G+ N ++ S +F + QQD EFL Y+L +L+E+ +
Sbjct: 506 VKLLSNMLNNSGGSFSPNVFKKIMGSLSPGAQFANSDQQDCVEFLNYILDSLHEDLNQRA 565
Query: 112 VPDQYNGSTYSNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCS 164
V + ++ S++Q + L WE++ SV D F GQ S ++C
Sbjct: 566 VKNAEERASIMELSTEQERAREVLPIRLASTIEWERYLKLNFSVIVDYFQGQYLSQLKCL 625
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
C+ TST Y F LSLP+P P
Sbjct: 626 VCQLTSTTYNTFSVLSLPIPESDARY--------------------------------PR 653
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF---SSN 277
+L +CL+ F E L + C C + K I RLP LI+ FKRF SS
Sbjct: 654 SVSLSQCLDLFTETELLDDDNKWHCPRCNTFTRSTKKISITRLPKALIIHFKRFGYESSG 713
Query: 278 FTQKVTSPIKFP-REGLDMEYYISASG-------------------------RRVESRYT 311
+K+ + IK+P + LD+ Y G R +
Sbjct: 714 RFKKLDTFIKYPVNDELDLTSYWPEVGSYTKEDSSARISVEKERELLATMPVRNQSPPFK 773
Query: 312 YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILV 371
Y L V NH G GHYT+Y ++E W +DD V+ ES+ AY L
Sbjct: 774 YKLYGVVNHFGNLTT-GHYTSYVKKEKG--WCYFDDAKVT---VGCDESSVLTKSAYCLF 827
Query: 372 YQR 374
YQR
Sbjct: 828 YQR 830
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 164/372 (44%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + + ++S DIF G RS ++C +C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSEPTSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + SS + +V + W+ ++ GE
Sbjct: 198 LDI-------------SSAQ--------SVNQALWDTE-------------KSEELRGEN 223
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
+ C C+++ K I P VL+L KRFS++ K+ + +P E LD++ Y+S
Sbjct: 224 AY-YCGRCRQKMPASKTLHIHSAPKVLLLVLKRFSASMGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY +Y + G G+WY DDT V+ D +V
Sbjct: 282 ---QPTGGPLPYALYAVLVHEGATCHSGHYFSYV-KAGHGKWYKMDDTKVTSCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|157427794|ref|NP_001098803.1| ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
gi|281312476|sp|A7Z056.1|UBP20_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|157279133|gb|AAI53255.1| USP20 protein [Bos taurus]
gi|296482025|tpg|DAA24140.1| TPA: ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
Length = 912
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 123/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 441 SVISDIFDGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 500
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 501 CGDSYVAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 553
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K++S + FP EGLD+ +
Sbjct: 554 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPF 613
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 614 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 670
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 671 QNAE----AYVLFYRK 682
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HRKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|426226105|ref|XP_004007194.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Ovis aries]
Length = 992
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 122/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 431 SVISDIFDGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 490
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW + TL +CL FF + L
Sbjct: 491 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVV-------TLEDCLAAFFAADELKGD 543
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K++S + FP EGLD+ +
Sbjct: 544 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPF 603
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 604 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 660
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 661 QNAE----AYVLFYRK 672
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HRKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|301787135|ref|XP_002928982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Ailuropoda melanoleuca]
Length = 523
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 172 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 230
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 231 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 287
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 288 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 329
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + L S S V G TL +CL +F E L +
Sbjct: 330 PGSSTPFWP--LSPGSEGSVVNGESHV------------AGTTTLTDCLRRFTRPEHLGS 375
Query: 244 ----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
C C + K ++++P V KRF S+ +K+T+ + FP E LDM
Sbjct: 376 GAKIKCSGCHSYQESTKQLTMKKVPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 434
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 435 FMASSKESRMNGQYQQLTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 492
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 493 DDAIITKASIEDVLDSE----GYLLFYHKQ 518
>gi|297303872|ref|XP_002806289.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Macaca
mulatta]
Length = 487
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 172/400 (43%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 125 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 179
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 180 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 238
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 239 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 275
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P G+ S R S+ S + PG TL +CL +F
Sbjct: 276 WDISLDLP---GSCTSFWPMSPGRESSVNGESHI------------PGITTLTDCLRRFT 320
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 321 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 380
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 381 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 435
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 436 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 470
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 151/380 (39%), Gaps = 80/380 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQ--LVDALVNFMK 60
G+ N GNTC++N+VLQ L+ FR +LN ED G L D +
Sbjct: 222 GLRNLGNTCFMNAVLQALACIKDFREYILNLPSLEDYVEDEKIAQNGNCFLTDEYQKLLA 281
Query: 61 MMWSSGNLVLNT--KAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
M S+ N T A S +F G +Q D+ EFL YLL ++ E
Sbjct: 282 SM-SARNFRDPTSPNEFREAFVSACPRFRGFRQHDSHEFLRYLLDQMHTE---------- 330
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
R + + + S F G L+SSV C C+ S + F +
Sbjct: 331 -------------MRKCRNLPEMPDDKTTPISKSFEGTLQSSVICQTCRNVSNKMDDFMD 377
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSL VP Y L +CL+ FF
Sbjct: 378 LSLDVPRVSKARYR-----------------------------------LSDCLDLFFQR 402
Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLD 294
E L C CK + K I++LP VL L KRF N K+ + I+FP GL
Sbjct: 403 ELLEKGEKPECSKCKSKQTCSKQMFIKKLPEVLCLHIKRFRDN-GGKIDTLIEFPLTGLS 461
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
++ +++ E Y+L ++ HIG GHY A+ RR +WY +DDTVV ++
Sbjct: 462 VDDFLTEDSD--EPPCVYELHSIIVHIGYGCSSGHYIAFGRR--GAKWYQFDDTVVKAME 517
Query: 355 AQTVESAEAEHGAYILVYQR 374
+ + AY+L+Y +
Sbjct: 518 TSNI----TKQRAYVLMYTK 533
>gi|307193249|gb|EFN76140.1| Ubiquitin carboxyl-terminal hydrolase 36 [Harpegnathos saltator]
Length = 874
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 161/375 (42%), Gaps = 77/375 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-----LVDALVNFMKM 61
G+ N GNTCY+NS LQ L + PA N LL++ P H Q L A+ ++
Sbjct: 125 GMLNIGNTCYLNSTLQALFHVPALVNWLLSD--PHHNSKYEQSDGSTECLTCAVAKTLQF 182
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+ I L+S + QQ+DA EFL YLL + E A
Sbjct: 183 SHLKSGGAIKPFHIYNKLKSICRTMMHGQQEDAHEFLRYLLEGM-ERA------------ 229
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
Y + + T+ +S K T+ + +IF
Sbjct: 230 ---------------YLTRHKATKLDSYS----------------KETTPINQIF----- 253
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
GG +R+ V+C C+ ST ++ F +L + + TL E LN +F+ E L
Sbjct: 254 -----GG-----YIRTEVKCLQCQHVSTTFQHFQDLLVDIRKAN-TLDEALNGYFSREQL 302
Query: 242 HNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYY 298
N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +DM Y
Sbjct: 303 DNNDYKCEACKRRVPATKQFTLERPPKVLCVQLKRFSVGGG-KISRHIGF-KQTIDMSRY 360
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+ + TY L +V H+G + GHYTA + +G++Y +DD V P+ V
Sbjct: 361 LWREPGESPKQLTYKLMSVVTHMGPSVNCGHYTAIA-QVSSGQYYTFDDACVRPISLNNV 419
Query: 359 ESAEAEHGAYILVYQ 373
S AYI++++
Sbjct: 420 LST----NAYIMIFE 430
>gi|451996282|gb|EMD88749.1| hypothetical protein COCHEDRAFT_1196677 [Cochliobolus heterostrophus
C5]
Length = 1059
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 166/411 (40%), Gaps = 81/411 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLL----NEDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N G TCY+NSV+QCLS ++ L D+ ++G L +A + +
Sbjct: 679 GLLNFGVTCYMNSVVQCLSGHLLLSDLFLTGRYQRDLQRDNWKGTKGILPEAYATLLSNL 738
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV----PDQYNG 118
+ + + ++ ++QQDA+EFL ++L ++E+ + P +
Sbjct: 739 YKGDVSSVRPSTFRRICGHFNSQWGIDEQQDAKEFLEFVLDYMHEDMNLTWNKPPLKPLT 798
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
T + + A+ W ++Q + SV +F GQ
Sbjct: 799 DQEELTRERFPRQYSAMIEWRRYQHRDMSVIGGLFAGQ---------------------- 836
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
+ QL C C TST YE FW +S+ +P G L +CL +
Sbjct: 837 ------------HASQLT----CQTCGVTSTTYEAFWSISVEIPREGQCDLRQCLESYCA 880
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPR 290
E L C CKK + VK I R P L++ FKRFS++ T+ KV +P+ FP
Sbjct: 881 PEHLAGDELWRCPRCKKDREAVKKITITRAPDTLVIHFKRFSASRTETARKVRTPVHFPL 940
Query: 291 EGLDM------------EYYISASGRR-------------VESRYTYDLCAVSNHIGKTA 325
+ LD+ E +++ R + + Y+ AV HIG T
Sbjct: 941 QRLDIGPFVEPPMTPEQEAFVAQKARDGPVQLAGVKADSTMNGPFVYNAYAVIWHIGATL 1000
Query: 326 LYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV--ESAEAEHGAYILVYQR 374
GHY A+ + + G W ++D + D + S AYI+ Y+R
Sbjct: 1001 GSGHYIAFVKDKSRGCWRSFNDDKIHDFDPGNLPANSRLQNEKAYIVFYER 1051
>gi|441675766|ref|XP_003276933.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Nomascus
leucogenys]
Length = 788
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 172/400 (43%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 426 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 480
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 481 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 539
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 540 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 576
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P G+ S R S+ S + PG TL +CL +F
Sbjct: 577 WDISLDLP---GSCTSFWPMSPGRESSVNGESHI------------PGITTLTDCLRRFT 621
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 622 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 681
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 682 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 736
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 737 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 771
>gi|384248082|gb|EIE21567.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 934
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 45/288 (15%)
Query: 103 AALNEEAKVVPDQYNGSTYSNTS--SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSS 160
+A +EA VP + + + + +A W + + SV D+F GQL+SS
Sbjct: 661 SAPKQEASEVPKEEGAGDAEGVEVPKEDLEAAKADREWARHLAQDNSVIYDLFSGQLQSS 720
Query: 161 VRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLP 220
++C C T YE+F +LS+P+ G + F + S P
Sbjct: 721 IKCHKCNNRFTTYEVFLDLSVPLTKEG-------------------KGGMLNFFSKNSTP 761
Query: 221 VPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSS 276
++ +CL+ F E + C++C +++ K + I RLP VL+L KRF
Sbjct: 762 ------SIEDCLHAFTTDEVMQGDEAFQCEHCNERTSATKHFRIHRLPKVLLLHIKRFKY 815
Query: 277 NFT--QKVTSPIKFPREGLDMEYYIS-ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAY 333
T +K+T+ + FP + L ++ ++S SG Y+L AVSNHIG + GHY A
Sbjct: 816 TGTTREKITTNVTFPLKNLSLQPFVSDESGLEDADTSKYELFAVSNHIG-SITNGHYMAV 874
Query: 334 CR------REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
C+ + +W+ Y D V V A V S AY+L Y R+
Sbjct: 875 CKAPPPPGAKDKDQWFCYSDDSVKRVPASAVPSP----NAYLLCYHRK 918
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLL 35
M G G+ N GNTC+INS LQ L TP F +L+
Sbjct: 220 MPSGSVGLRNIGNTCFINSALQVLRWTPGFAELLV 254
>gi|148701945|gb|EDL33892.1| mCG3962 [Mus musculus]
Length = 568
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 206 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 260
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 261 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 316
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 317 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 358
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 359 ISLDLPGSCTSFWP---MSPGRESSLNGESHI------------PGITTLTDCLRRFTRP 403
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 404 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 462
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S RV + Y L AV NH G T GHYT++ R
Sbjct: 463 LDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 520
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 521 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 551
>gi|313236716|emb|CBY11972.1| unnamed protein product [Oikopleura dioica]
Length = 515
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 172/379 (45%), Gaps = 84/379 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE--DIPIHPDSKSQGQLVDALVNFMK--MM 62
G+ N GN+CY+NSVLQCL + + L + I+ SK+ G++ +
Sbjct: 208 GLKNIGNSCYLNSVLQCLLHCSPMQAYLTKGKYESEINSSSKTSGKVAKYAAQLFDDLLS 267
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
S+GN L A+ A + F G Q+DAQEFL + L AL+E+ V + + +
Sbjct: 268 GSTGNPALVKGAVSKA----SGLFRGTAQEDAQEFLRWFLEALHEDVCRVRSKPRVTQEA 323
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
++S+ W ++ E S D+ VGQL+S
Sbjct: 324 KSASEA---------WRFYKFREDSSIVDMCVGQLKS----------------------- 351
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
S+ CS C S V++ FW+LSLP+P + +CL +F E +
Sbjct: 352 ---------------SLTCSVCSYVSEVWDPFWDLSLPIPSVARGIDDCLKEFQREEIME 396
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFT-QKVTSPIKFPREGLDM 295
+ C+ CKK+ + K + I++ P +L++ KRF S+ ++ +K+T+ I+FP
Sbjct: 397 GSEMPKCEKCKKRRKMSKKFSIEKYPQLLVIHLKRFGDSTGYSRRKITADIRFPE----- 451
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+S G + Y+L +V NH G GHYTA+ + + W+ Y+D+ VS
Sbjct: 452 --MMSMDGNK------YELQSVCNHFGSIGG-GHYTAFGKTQNG--WFDYNDSQVSKT-- 498
Query: 356 QTVESAEAEHGAYILVYQR 374
S+ AY+L Y R
Sbjct: 499 ----SSFQSKDAYLLFYTR 513
>gi|440912738|gb|ELR62279.1| Ubiquitin carboxyl-terminal hydrolase 22-A, partial [Bos grunniens
mutus]
Length = 541
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 172/398 (43%), Gaps = 78/398 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 166 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 220
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 221 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDAG 276
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 277 KAASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 318
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 319 ISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFTRP 363
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP E
Sbjct: 364 EHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 422
Query: 293 LDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCRRE 337
LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 423 LDMTPFMASSK---ESRMNGQLQLPTNSGNDENKYSLFAVVNHQG-TLESGHYTSFIRHH 478
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 479 -KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 511
>gi|223005910|ref|NP_062334.2| ubiquitin carboxyl-terminal hydrolase 27 [Mus musculus]
gi|226753949|sp|Q8CEG8.2|UBP27_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
thioesterase 27; AltName:
Full=Ubiquitin-specific-processing protease 27; AltName:
Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
Length = 438
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 130
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 131 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 186
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 187 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 228
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 229 ISLDLPGSCTSFWP---MSPGRESSLNGESHI------------PGITTLTDCLRRFTRP 273
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 274 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 332
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S RV + Y L AV NH G T GHYT++ R
Sbjct: 333 LDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 390
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 391 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 421
>gi|223005906|ref|NP_001138545.1| ubiquitin carboxyl-terminal hydrolase 27 [Homo sapiens]
gi|229558013|sp|A6NNY8.3|UBP27_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 27; AltName:
Full=Deubiquitinating enzyme 27; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 22-like; AltName:
Full=Ubiquitin thioesterase 27; AltName:
Full=Ubiquitin-specific-processing protease 27; AltName:
Full=X-linked ubiquitin carboxyl-terminal hydrolase 27
gi|119610336|gb|EAW89930.1| hCG1640930 [Homo sapiens]
gi|380785533|gb|AFE64642.1| ubiquitin carboxyl-terminal hydrolase 27 [Macaca mulatta]
gi|410213554|gb|JAA03996.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
gi|410299550|gb|JAA28375.1| ubiquitin specific peptidase 27, X-linked [Pan troglodytes]
Length = 438
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 172/400 (43%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 130
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 131 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 189
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 190 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 226
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 227 WDISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFT 271
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 272 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 331
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 332 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 386
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 387 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 421
>gi|26326383|dbj|BAC26935.1| unnamed protein product [Mus musculus]
Length = 540
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 178 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 232
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 233 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 288
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 289 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 330
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 331 ISLDLPGSCTSFWP---MSPGRESSLNGESHI------------PGITTLTDCLRRFTRP 375
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 376 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 434
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S RV + Y L AV NH G T GHYT++ R
Sbjct: 435 LDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 492
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 493 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 523
>gi|223005912|ref|NP_001138547.1| ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
gi|296470746|tpg|DAA12861.1| TPA: ubiquitin carboxyl-terminal hydrolase 27 [Bos taurus]
Length = 438
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 172/398 (43%), Gaps = 78/398 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 130
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 131 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDAG 186
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 187 KAASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 228
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 229 ISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFTRP 273
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP E
Sbjct: 274 EHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 332
Query: 293 LDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCRRE 337
LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 333 LDMTPFMASSK---ESRMNGQLQLPTNSGNDENKYSLFAVVNHQG-TLESGHYTSFIRHH 388
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 389 -KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 421
>gi|189217810|ref|NP_001121345.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus laevis]
gi|281312478|sp|B1WBD7.1|UBP20_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|171846441|gb|AAI61716.1| LOC100158436 protein [Xenopus laevis]
Length = 840
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 123/252 (48%), Gaps = 34/252 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ S +
Sbjct: 369 SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIP---GKEDLAKLHSTIHQSTVIK 425
Query: 207 TST-------------VYEIFWELSLPVPPG-----GGTLYECLNKFFNGETLHN----T 244
T V + + P TL +CL FF + L +
Sbjct: 426 AGTCGDSYAAQGWLAFVMDYIRRFVVSCIPSWFWGPMITLEDCLAAFFAADELKGDNMYS 485
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISAS 302
C+ CKK + VK ++ RLP VL + KRF ++ K+ S + FP EGL++ +++
Sbjct: 486 CERCKKLRNGVKYCKVLRLPEVLCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKE 545
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
V TYDL AV H G +A GHY +YC+ G+WY +DD V+ V V++AE
Sbjct: 546 C--VSRITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAE 602
Query: 363 AEHGAYILVYQR 374
AY+L Y++
Sbjct: 603 ----AYVLFYRK 610
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 99 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSELW 156
Query: 64 SSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPD 114
+ L ++ F G QQD QEFL L+ L+EE K ++P+
Sbjct: 157 HKKRPSYVVPSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLHEELKEPILPE 210
>gi|355568328|gb|EHH24609.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Macaca mulatta]
Length = 469
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 166/393 (42%), Gaps = 67/393 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 118 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 176
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 177 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 233
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 234 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 275
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 276 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 321
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 322 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 380
Query: 298 YISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCRREGTGRW 342
++++S ESR Y L AV NH G T GHYT++ R+ +W
Sbjct: 381 FMASSK---ESRMNGQSQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQW 435
Query: 343 YLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ DD +++ + V +E Y+L Y ++
Sbjct: 436 FKCDDAIITKASIKDVLDSE----GYLLFYHKQ 464
>gi|402910176|ref|XP_003917765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Papio anubis]
Length = 726
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 172/400 (43%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 364 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 418
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 419 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 477
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 478 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 514
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P G+ S R S+ S + PG TL +CL +F
Sbjct: 515 WDISLDLP---GSCTSFWPMSPGRESSVNGESHI------------PGITTLTDCLRRFT 559
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 560 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 619
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 620 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 674
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 675 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 709
>gi|363754337|ref|XP_003647384.1| hypothetical protein Ecym_6184 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891021|gb|AET40567.1| hypothetical protein Ecym_6184 [Eremothecium cymbalariae
DBVPG#7215]
Length = 851
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 162/404 (40%), Gaps = 79/404 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY++ ++QCL T + LN I ++ S+G L + M
Sbjct: 487 GLVNCGNSCYMSCIIQCLLGTQELCTMFLNNSYQNHINLNSRLGSKGVLARYFSQLIHQM 546
Query: 63 WSSGNLVLNTK-----AIL-----LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV 112
+ G + T A+L +A S F QQD QEF +LL L+E+
Sbjct: 547 YQQGKDIRKTSGTEKTAVLPAQFKIACGSINALFRDRSQQDCQEFCQFLLDGLHEDLNQC 606
Query: 113 PDQYNGSTYSNTSSK--QVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
+ S + K ++ R WE++ TT+ SV D+F GQ S +RC C R
Sbjct: 607 GNNPPLKELSEKAEKMREMMPMRIASSIEWERYLTTDFSVIVDLFQGQYASQLRCKVCGR 666
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
TST Y+ F LS+PVP SS +C T+
Sbjct: 667 TSTTYQPFSVLSVPVP------------SSRQC-------------------------TI 689
Query: 229 YECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQK--- 281
+C +F ETL +C CKK+ K I RLP LI+ KRF + +
Sbjct: 690 IDCFTEFTKVETLDLDEQWSCPDCKKRQPSTKKITITRLPRNLIIHLKRFDNMLNKNNVF 749
Query: 282 -----VTSPIKFPREGLDMEYY----ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTA 332
V + F D + + R + Y L V+ H G T GHYTA
Sbjct: 750 VSYSAVLNLTSFWANDYDKKVMNNNNVELPSRGQVPPFNYQLYGVACHTG-TLYGGHYTA 808
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQR 374
Y + T W YDDT + + + S+ AY+L Y R
Sbjct: 809 YVNKGATLGWCYYDDT-----NWRQIRSSNEYISQNAYVLFYHR 847
>gi|149239706|ref|XP_001525729.1| hypothetical protein LELG_03657 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451222|gb|EDK45478.1| hypothetical protein LELG_03657 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 829
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 181/426 (42%), Gaps = 91/426 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLL-----------NEDIPIHPDSKSQGQLVDAL 55
G+ N GN+CY+NSV+QCL+ P + + + I ++ +QG+L
Sbjct: 436 GLVNLGNSCYLNSVVQCLTAAPDLTSFFVPSITYNDTDSYKQHINVNNKLGTQGKLTMGF 495
Query: 56 VNF-MKMMWSSGNLVLNTKAILLA-LRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP 113
V + M+ + G L +K +A S ++F QQD EFL +LL L+E+
Sbjct: 496 VELILNMLKNDGKLFSPSKFKQIAGALSPGRQFATYDQQDCVEFLDFLLDGLHEDL---- 551
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
N S+ KQ R + T E ++ +L S++ +
Sbjct: 552 ---NQFAVSDPKEKQ----RIMEL-----TPEQEHAREVLPVRLASTIE----------W 589
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG------- 226
E + +L+ + ++ Q S ++C CK TST Y F LSLP+P G
Sbjct: 590 ERYLKLNFSIIVDK---FQGQYLSQLKCLECKFTSTSYNAFSILSLPIPEKLGRGSNQTV 646
Query: 227 TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF----SSNF 278
TL +CL +F E L C CKK + K I RLP +LIL+FKRF S+
Sbjct: 647 TLNDCLEEFITTELLDEDNKWHCPRCKKLTKSTKRIAITRLPQILILYFKRFKLHESNQL 706
Query: 279 TQKVTSPIKFP-REGLDMEYYISASGR-----RVESRYT--------------------- 311
+K+ + + +P E LD+ Y S G +E+R T
Sbjct: 707 FRKLETFVTYPVTEVLDLTKYWSDIGTTLSDASLENRMTPEEEQQRLKNLPVRNQVPPFK 766
Query: 312 YDLCAVSNHIGKTALYGHYTAYC---RREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAY 368
Y L AV+NH G GHYTAY R+G W ++D+ V+ S AY
Sbjct: 767 YKLFAVANHFGNLTT-GHYTAYVYKKDRKGVKNWCYFEDSRVT---KNVSPSQVMNKNAY 822
Query: 369 ILVYQR 374
L ++R
Sbjct: 823 CLFFRR 828
>gi|395753974|ref|XP_002831695.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pongo abelii]
Length = 665
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 172/400 (43%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 303 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 357
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 358 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 416
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 417 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 453
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 454 WDISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFT 498
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 499 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 558
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 559 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 613
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 614 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 648
>gi|348570388|ref|XP_003470979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cavia
porcellus]
Length = 901
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSV------R 200
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ +
Sbjct: 428 SVISDIFNGSILSFVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSAIYQNVPAK 484
Query: 201 CSNCKRT-------STVYEIFWELSLPVPPGG-----GTLYECLNKFFNGETLHN----T 244
C + + + E + P TL +CL FF + L +
Sbjct: 485 PGTCGDSYVAQGWLAFIVEYIRRFVISCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYS 544
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEYYISAS 302
C+ CKK + VK ++ RLP +L + KRF T KV+S + FP EGLD+ +++
Sbjct: 545 CERCKKLRNGVKYCKVLRLPEILCIHLKRFRHELTYSFKVSSHVSFPLEGLDLRPFLAKE 604
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
TYDL ++ H G TA GHY AYC+ G+WY +DD V+ V V+ AE
Sbjct: 605 C--TSQVTTYDLLSIICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQHAE 661
Query: 363 AEHGAYILVYQR 374
AY+L Y++
Sbjct: 662 ----AYVLFYRK 669
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 142 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 199
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 200 HKKRPSYVIPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 247
>gi|397468706|ref|XP_003806014.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Pan paniscus]
Length = 642
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 170/396 (42%), Gaps = 74/396 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S + LV + + + ++
Sbjct: 280 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPS-PELCLVCEMSSLFRELY 338
Query: 64 SSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNGST 120
SGN + LL L + + G +QQDA EFL+ L L+ K V N
Sbjct: 339 -SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPN 397
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ N + IF G L+S V C C ST + W++S
Sbjct: 398 HCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDIS 434
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L +P + + S R S+ S + PG TL +CL +F E
Sbjct: 435 LDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFTRPEH 479
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLD 294
L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP E LD
Sbjct: 480 LGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLE-LD 538
Query: 295 MEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCRREGT 339
M ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 539 MTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIRHH-K 593
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 594 DQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 625
>gi|50290225|ref|XP_447544.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609540|sp|Q6FQF0.1|UBP4_CANGA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|49526854|emb|CAG60481.1| unnamed protein product [Candida glabrata]
Length = 887
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 162/410 (39%), Gaps = 93/410 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNFMKMM 62
G+ N GN+CYIN ++QC+ T + LN H + +S+ G L +K M
Sbjct: 526 GLENMGNSCYINCIIQCIFATTELIKIFLNGTYAKHINKQSKLGSKGVLSHNFAKLLKDM 585
Query: 63 W---SSGNL-----VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------ 108
+ SS + + T +A S F QQD EF +LL L+E+
Sbjct: 586 YEENSSKKIGKKHGAVKTLQFKMACASVNSLFKDASQQDCLEFCQFLLDGLHEDLNQCGA 645
Query: 109 ----AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
++ P+ N S + S WE++ TT+ S+ D+F GQ S +RC
Sbjct: 646 NPPLKELSPEA--EKMRENLSLRVASSIE----WERYLTTDFSIIVDLFQGQYASQLRCK 699
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
C RTST Y+ F LS+PVP G C
Sbjct: 700 VCNRTSTTYQAFSVLSVPVPSGKS------------CG---------------------- 725
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ 280
L +C +F E L C CKK+ K I RLP LI+ KRF N
Sbjct: 726 ---LLDCFIEFTKTENLEVDEQWFCPSCKKKQPSTKKLTITRLPRNLIIHLKRF-DNMMN 781
Query: 281 KVTSPIKFPREGLDMEYY----------------ISASGRRVESRYTYDLCAVSNHIGKT 324
K +++P + LD+ + I A G+ + Y L + H G T
Sbjct: 782 KNNIFVRYP-QILDLTPFWANDSDGKLPPGITDEIPARGQV--PPFNYRLYGAACHFG-T 837
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT+Y + W +DDTV PV Q + + AY+L Y R
Sbjct: 838 LYGGHYTSYVDKGPEKGWIYFDDTVYRPVRFQNEFISPS---AYVLFYHR 884
>gi|229597175|gb|AAI37613.1| Usp27x protein [Mus musculus]
Length = 733
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 371 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 425
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 426 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 481
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 482 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 523
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 524 ISLDLPGSCTSFWP---MSPGRESSLNGESHI------------PGITTLTDCLRRFTRP 568
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 569 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 627
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S RV + Y L AV NH G T GHYT++ R
Sbjct: 628 LDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 685
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 686 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 716
>gi|426258083|ref|XP_004022649.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
[Ovis aries]
Length = 557
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 172/398 (43%), Gaps = 78/398 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 195 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 249
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 250 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDAG 305
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 306 KAASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 347
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 348 ISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFTRP 392
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP E
Sbjct: 393 EHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 451
Query: 293 LDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCRRE 337
LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 452 LDMTPFMASSK---ESRMNGQLQLPTNSGNDENKYSLFAVVNHQG-TLESGHYTSFIRHH 507
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 508 -KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 540
>gi|332027218|gb|EGI67307.1| Ubiquitin carboxyl-terminal hydrolase 36 [Acromyrmex echinatior]
Length = 874
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 165/378 (43%), Gaps = 81/378 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVD--------ALVNF 58
G+ N GNTCY+NS LQ L + PA N LL++ H +SK + ++D A+
Sbjct: 122 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDP---HHNSKCEQNILDGGGECLTCAVAKT 178
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
++ + + L+ + QQ+DA EFL YLL + E A
Sbjct: 179 LQFSHQKSGGAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGM-ERA--------- 228
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
Y K + T+ +S K T+ + +IF
Sbjct: 229 ------------------YLTKHKATKLDNYS----------------KETTPINQIF-- 252
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
GG +R+ V+C C+ ST ++ F +L + + TL E LN +F+
Sbjct: 253 --------GG-----YIRTEVKCLQCQHVSTTFQHFQDLLVDIRKAN-TLDEALNSYFSR 298
Query: 239 ETLHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDM 295
E L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +DM
Sbjct: 299 EQLDNNDYKCEACKRRVPATKQFTLERPPKVLCVQLKRFSY-LGGKISRHIGF-KQTIDM 356
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
Y+ + TY L ++ H+G + GHYTA + +G++Y +DD+ V P+
Sbjct: 357 GQYLWREPGESPKQLTYKLMSMVTHMGPSVNCGHYTAIA-QVSSGQYYSFDDSCVRPISL 415
Query: 356 QTVESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 416 NNVLST----NAYIMIFE 429
>gi|395506252|ref|XP_003757449.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Sarcophilus harrisii]
Length = 908
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 124/252 (49%), Gaps = 34/252 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSV------R 200
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ +
Sbjct: 437 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSAIYQNVPAK 493
Query: 201 CSNCKRTST-------VYEIFWELSLPVPPGG-----GTLYECLNKFFNGETLHN----T 244
C + T + E + P TL +CL FF + L +
Sbjct: 494 SGTCGDSYTSQGWIAFIMEYIRRFVVSCIPSWFWGPVVTLEDCLAAFFAADELKGDNMYS 553
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISAS 302
C+ CKK + VK ++ RLP +L + KRF ++ K+ S + F EGLD++ +++
Sbjct: 554 CERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFSLEGLDLQPFLAKE 613
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
V TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V++AE
Sbjct: 614 C--VSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE 670
Query: 363 AEHGAYILVYQR 374
AY+L Y++
Sbjct: 671 ----AYVLFYRK 678
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGLKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|291407490|ref|XP_002719920.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
Length = 803
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 172/397 (43%), Gaps = 76/397 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 441 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 495
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 496 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 554
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 555 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 591
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 592 WDISLDLPGSSTSFWP---MSPGRESSVNGESHL------------PGISTLTDCLRRFT 636
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 637 RPEHLGSSAKIKCGGCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 696
Query: 291 EGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREG 338
E LDM ++++S R+ + Y L AV NH G T GHYT++ R
Sbjct: 697 E-LDMTPFMASSKESRINGQLQLPTNSGSNENKYSLFAVVNHQG-TLESGHYTSFIRHH- 753
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 754 KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 786
>gi|426395913|ref|XP_004064203.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
[Gorilla gorilla gorilla]
Length = 549
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 172/400 (43%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 187 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 241
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 242 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 300
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 301 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 337
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 338 WDISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFT 382
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 383 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 442
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 443 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 497
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 498 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 532
>gi|403297603|ref|XP_003939647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27, partial
[Saimiri boliviensis boliviensis]
Length = 550
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 172/400 (43%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 188 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 242
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 243 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 301
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 302 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 338
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 339 WDISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFT 383
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 384 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 443
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 444 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 498
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 499 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 533
>gi|23262727|gb|AAL79676.1| pVHL-interacting deubiquitinating enzyme 2 [Homo sapiens]
gi|168278785|dbj|BAG11272.1| ubiquitin carboxyl-terminal hydrolase 20 [synthetic construct]
Length = 913
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 442 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 501
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 502 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 554
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 555 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 614
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 615 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 671
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 672 QNAE----GYVLFYRK 683
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|24660425|gb|AAH39593.1| Ubiquitin specific peptidase 20 [Homo sapiens]
gi|119608320|gb|EAW87914.1| ubiquitin specific peptidase 20, isoform CRA_b [Homo sapiens]
Length = 913
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 442 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 501
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 502 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 554
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 555 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 614
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 615 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 671
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 672 QNAE----GYVLFYRK 683
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|7673618|gb|AAF66953.1|AF229643_1 ubiquitin specific protease [Mus musculus]
Length = 525
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 172/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 163 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 217
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K
Sbjct: 218 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK-------- 268
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
VG + H + IF G L+S V C C ST + W+
Sbjct: 269 -------GDDVGKVASNH------NHCNCIIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 315
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 316 ISLDLPGSCTSFWP---MSPGRESSVDGESHI------------PGITTLTDCLRRFTRP 360
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+ + I FP E
Sbjct: 361 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKIATYISFPLE- 419
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S RV + Y L AV NH G T GHYT++ R
Sbjct: 420 LDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 477
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 478 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 508
>gi|189521699|ref|XP_688359.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Danio rerio]
Length = 383
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 161/394 (40%), Gaps = 76/394 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L I P K L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKIQPRRKE--SLLTCLADLFNSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A L +E K Q NG
Sbjct: 96 KKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKSQERQQNGKVV 155
Query: 122 SNTSSKQVGSFRALHYWEKFQT--TEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
N S G E T+ + +IF G L + RC NC+ S+ E F +L
Sbjct: 156 QNGGSGSGGGGSGSSTGEGETEEKTQQTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDL 215
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
S+ V + TS + CL F N E
Sbjct: 216 SVDVE--------------------QNTSITH-------------------CLRGFSNTE 236
Query: 240 TLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPR 290
TL + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 237 TLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP- 294
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
L++ + + SG YDL AV H G GHY + G W L+DD +V
Sbjct: 295 --LELRLF-NTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIV 349
Query: 351 SPVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 350 EKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 382
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 169/397 (42%), Gaps = 53/397 (13%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFR---NVLLNEDIPIHPDSKSQGQ----------LVD 53
G+ N GNTC++NSVLQ LSN F N + + + H Q + +V+
Sbjct: 230 GLRNLGNTCFMNSVLQSLSNIQEFSGYFNTMPSLETGKHKHKAYQSRSMKENLDDVFVVE 289
Query: 54 ALVNFMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
L + + G+ ++ + + L + +F G++Q DA EFL Y+L L+ E +
Sbjct: 290 ELRKVLLNLSQGGDGSKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTELQ 349
Query: 111 VV--PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKR 168
V P + + + S + + S+ +++F G L+S VRC C
Sbjct: 350 QVSFPVEISSPSAQKASETKSNPYNIPALSHLQSKGRNSIVTNVFGGILQSEVRCLICGM 409
Query: 169 TSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTL 228
S ++ F +LSL +P Y K E E + PV +
Sbjct: 410 ESKKHDPFLDLSLDIPE---KFYN------------KDPPESGEKDKEGNPPV----CNI 450
Query: 229 YECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKV 282
+CL F E L T C CK + K + I+RLP VL L KRF N + K+
Sbjct: 451 SDCLASFTEVEELTETELYYCSSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYRTKI 510
Query: 283 TSPIKFPREGLDMEYYISASG----RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
I FP LDM ++ +G R S YDL AV H G + GHYT+Y G
Sbjct: 511 DLRISFPINALDMSQFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYTSYAINNG 570
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
W ++D V V + SA AE YIL Y +R
Sbjct: 571 V--WMHFNDHSVKEVSS----SAVAECKPYILFYIKR 601
>gi|183396780|ref|NP_001103773.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397134|ref|NP_006667.3| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397136|ref|NP_001008563.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|116242837|sp|Q9Y2K6.2|UBP20_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2;
Short=hVDU2
Length = 914
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|148233102|ref|NP_001090641.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus (Silurana)
tropicalis]
gi|281312479|sp|A0JM59.1|UBP20_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|117557978|gb|AAI25750.1| usp20 protein [Xenopus (Silurana) tropicalis]
Length = 884
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 123/259 (47%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++ S +
Sbjct: 413 SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIP---GKEDLAKLHSTIHQSAVSK 469
Query: 207 TST-------------------------VYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
T + FW + TL +CL FF + L
Sbjct: 470 AGTCGDSYAAQGWLSFFMDYIRRFVVSCIPSWFWGPMI-------TLEDCLAAFFAADEL 522
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGL++
Sbjct: 523 KGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNL 582
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+++ V TYDL AV H G +A GHY +YC+ G+WY +DD V+ V
Sbjct: 583 RPFLAKEC--VSRITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHE 639
Query: 356 QTVESAEAEHGAYILVYQR 374
V++AE AY+L Y++
Sbjct: 640 TVVQNAE----AYVLFYRK 654
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISELW 200
Query: 64 SSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ L ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLHEELK 248
>gi|410227942|gb|JAA11190.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410227944|gb|JAA11191.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263220|gb|JAA19576.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263222|gb|JAA19577.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303424|gb|JAA30312.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303426|gb|JAA30313.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 PRDSDSSDTDEKREG 274
>gi|119608317|gb|EAW87911.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608318|gb|EAW87912.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608319|gb|EAW87913.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
Length = 916
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 445 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 504
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 505 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 557
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 558 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 617
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 618 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 674
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 675 QNAE----GYVLFYRK 686
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 146 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 203
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 204 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 262
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 263 ARDSDSSDTDEKREG 277
>gi|351707914|gb|EHB10833.1| Ubiquitin carboxyl-terminal hydrolase 49 [Heterocephalus glaber]
Length = 525
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 168/422 (39%), Gaps = 93/422 (22%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED---------IPIH-------PDS 45
+PG+ G+ N GNTCY+NS+LQ LS+ FR LN D H P+
Sbjct: 118 APGVTGLRNLGNTCYMNSILQVLSHLRKFRECFLNLDPCTTEHLFAQAAHRKARLSAPEP 177
Query: 46 KSQGQLVDALVN-----------FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDA 94
+++ +A ++MWS +++ A+L ++ S F G QQDA
Sbjct: 178 QARSDRAEACRRDGLCWNGGVSLTFRVMWSGRWALVSPFAMLHSVWSLIPAFRGYDQQDA 237
Query: 95 QEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEA--SVFSDI 152
QEFL LL + +E + GST R L + + + T+ V + I
Sbjct: 238 QEFLCELLHKVQQELEA-----EGSTR-----------RILIPFSQRKLTKQVLKVVNTI 281
Query: 153 FVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYE 212
F GQL S V C +C S E FW+LSL P Y C + V
Sbjct: 282 FHGQLLSQVTCISCNYKSNTIEPFWDLSLEFPER----YHCIEKGFV------------- 324
Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHN---TCQYCKKQ-----------SDLVKLY 258
P+ L E L KF E L C C + S+ K
Sbjct: 325 -------PLNQTECLLTEMLAKFTETEALEGRIYACDQCNSKRRKSNPKPLVLSEARKQL 377
Query: 259 EIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLDMEYYISAS--GRRVESRYTYD 313
I LP VL L KRF N +K+ + F + L ME Y + + YD
Sbjct: 378 MIYTLPQVLRLHLKRFRWSGRNHREKIGVHVAF-EQVLTMEPYCCRDMLSSLDKETFAYD 436
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
L AV H GK GHYTAYC G W +D+ ++ + V + AYIL Y
Sbjct: 437 LSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQ----AYILFYT 492
Query: 374 RR 375
+R
Sbjct: 493 QR 494
>gi|114627163|ref|XP_520313.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
troglodytes]
gi|332833113|ref|XP_003339229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Pan
troglodytes]
gi|410336889|gb|JAA37391.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410336891|gb|JAA37392.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 PRDSDSSDTDEKREG 274
>gi|40789018|dbj|BAA76847.2| KIAA1003 protein [Homo sapiens]
Length = 917
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 446 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 505
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 506 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 558
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 559 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 618
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 619 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 675
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 676 QNAE----GYVLFYRK 687
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 147 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 204
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 205 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 263
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 264 ARDSDSSDTDEKREG 278
>gi|397503609|ref|XP_003822413.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1 [Pan
paniscus]
gi|397503611|ref|XP_003822414.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
paniscus]
Length = 914
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 PRDSDSSDTDEKREG 274
>gi|170063255|ref|XP_001867024.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880931|gb|EDS44314.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1198
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 58/266 (21%)
Query: 145 EASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP------------PG------ 186
E S+ SDIF G+L SSV+C C R ST E F +LSLP+P PG
Sbjct: 396 ERSIISDIFDGKLLSSVQCLTCDRVSTREETFQDLSLPIPGKDHLAVLHQNHPGMQASPP 455
Query: 187 ------GGTLYECQLRSSVRCS----------------NCKRTSTVYEIFWELSLPVPPG 224
+ + CS N S + FW ++
Sbjct: 456 PHPHPHPHPPPTAGSSTGITCSDAVYPVSGDSWMWWFWNWPFWSWIRSWFWGPAV----- 510
Query: 225 GGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--F 278
+L++C+ FF+ + L +C+ C K + VK + LP +L + KRF + +
Sbjct: 511 --SLHDCMAAFFSADELKGDNMYSCEKCNKLRNGVKYSRVLALPEMLCVHLKRFRHDLSY 568
Query: 279 TQKVTSPIKFPREGLDMEYYISASGRRVESRYT-YDLCAVSNHIGKTALYGHYTAYCRRE 337
+ K++SP+ FP GLDM Y+ + +S T YDLCAV H G T GHYT++ + +
Sbjct: 569 SSKISSPVHFPLNGLDMRPYLH---KDCKSEVTSYDLCAVICHHG-TVGGGHYTSFAKHD 624
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEA 363
TG+W+ +DD +V+ V + V++ EA
Sbjct: 625 PTGKWFEFDDQLVTHVSPEDVQNCEA 650
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD-----SKSQGQLVDALVNF 58
GL G+ N NTCY+NS +Q LSN+P L+ I D + S+ L
Sbjct: 160 GLVGLQNIANTCYMNSAIQALSNSPPLTGYFLDCGSIIETDLLGNQTVSKPGLAKHYHKL 219
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
+K MW + IL +R F G QQ D QEFL + L+EE K V Q
Sbjct: 220 IKEMWCKNRRYVVPSGILYGIRIVHPMFRGYQQHDTQEFLRCFMDQLHEELKEVTQQ 276
>gi|149028472|gb|EDL83857.1| rCG22861 [Rattus norvegicus]
Length = 489
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 127 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 181
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 182 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 237
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 238 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 279
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 280 ISLDLPGSCTSFWP---MSPGRESSLNGESHI------------PGVTTLTDCLRRFTRP 324
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 325 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 383
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S R+ + Y L AV NH G T GHYT++ R
Sbjct: 384 LDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 441
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 442 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 472
>gi|366990235|ref|XP_003674885.1| hypothetical protein NCAS_0B04280 [Naumovozyma castellii CBS 4309]
gi|342300749|emb|CCC68512.1| hypothetical protein NCAS_0B04280 [Naumovozyma castellii CBS 4309]
Length = 922
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 162/401 (40%), Gaps = 75/401 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QCL T + LN I ++ S+G L + +M
Sbjct: 560 GLQNIGNSCYLNCIIQCLLGTHELTKIFLNNFYERHINLNSKLGSKGVLAKYFARLIHLM 619
Query: 63 WSSGNLVLNTKAIL-----LALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV----P 113
+ N L + +A+ S F QQD QEF +LL L+E+ P
Sbjct: 620 HNHANPKLKNNYVRPAQFKMAVGSVNTLFKNCSQQDCQEFCQFLLDGLHEDLNQCGSNPP 679
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
+ S K + WE+F TT+ SV D+F GQ S ++C CK TST Y
Sbjct: 680 LKELSSAAEKNREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLQCEVCKHTSTTY 739
Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT-LYECL 232
+ F LS+P+P VP G + +C
Sbjct: 740 QPFSVLSVPIP-----------------------------------RVPKGVKVNILDCF 764
Query: 233 NKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKF 288
F E L C CKK+ K I RLP LI+ KRF +N + I +
Sbjct: 765 KDFTKLELLDTDEQWLCPTCKKKQRSTKKLTITRLPRNLIIHLKRFDNNLNKNNNF-IDY 823
Query: 289 PREGLDM-EYYIS------ASGRRVE-------SRYTYDLCAVSNHIGKTALY-GHYTAY 333
P LD+ ++++ G R E + Y L V++H G +LY GHYTAY
Sbjct: 824 PF-ILDLTQFWVDDFDGKLPPGVRDELPKRGQIPPFKYKLYGVASHFG--SLYGGHYTAY 880
Query: 334 CRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ WY +DDT + + + AY+L Y R
Sbjct: 881 VDKGPKHGWYYFDDTNYRSIKNK---NEPITSSAYLLFYHR 918
>gi|444521987|gb|ELV13253.1| Ubiquitin carboxyl-terminal hydrolase 27 [Tupaia chinensis]
Length = 437
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 169/396 (42%), Gaps = 74/396 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S + LV + + + ++
Sbjct: 75 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHSCEMPS-PELCLVCEMSSLFRELY 133
Query: 64 SSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNGST 120
SGN + LL L + + G +QQDA EFL+ L L+ K V N
Sbjct: 134 -SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNPN 192
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ N + IF G L + V C C ST + W++S
Sbjct: 193 HCNC-----------------------IIDQIFTGGLHTDVTCQACHGVSTTIDPCWDIS 229
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L +P + + S R S+ S + PG TL +CL +F E
Sbjct: 230 LDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFTRPEH 274
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLD 294
L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP E LD
Sbjct: 275 LGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLE-LD 333
Query: 295 MEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCRREGT 339
M ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 334 MTPFMASSK---ESRMNGQLQLPTSSGNDENKYSLFAVVNHQG-TLESGHYTSFIRHH-K 388
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 389 DQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 420
>gi|417402329|gb|JAA48015.1| Putative ubiquitin carboxyl-terminal hydrolase 22 [Desmodus
rotundus]
Length = 525
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 165/390 (42%), Gaps = 61/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + G TL +CL +F E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGDSHMS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLV-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPADSLSNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 495 DDAIITKASIEDVLDSE----GYLLFYHKQ 520
>gi|223999083|ref|XP_002289214.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974422|gb|EED92751.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 546
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 162/366 (44%), Gaps = 58/366 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
G G+ N GNTC++N+ +QC+++TP+ L + D K LV++ ++ ++
Sbjct: 202 GTIGLDNLGNTCFMNAAIQCIAHTPSLAEFFLTNNHLYDGDEK----LVESFATVVRAIY 257
Query: 64 ---SSG--------------------NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLY 100
S+G + + K L L + +F G++Q D+ EFL
Sbjct: 258 QERSAGRGRGSGVSSHGRGYSIGGGDDQAFSPKDFLEQLVAVAPQFVGSRQHDSHEFLRV 317
Query: 101 LLAALNEE-------AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIF 153
L+ L+++ ++ P Q + S N + + ++ W++ + +S + IF
Sbjct: 318 LIDQLSDDLCDKAECQRLRPRQVSESECDNMTLHSLSNYS----WKQHLSQNSSKITSIF 373
Query: 154 VGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEI 213
GQL S++ CS C ++ F++LSLP P + R+S R S R
Sbjct: 374 GGQLISTIDCSVCHTQRHKFDPFYDLSLPFPEADPNKLDRNRRTSGRLSFFSRMRE---- 429
Query: 214 FWELSLPVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLIL 269
ELS T+ +CL F E L + C+ C+K+ D K ++ + P VL+L
Sbjct: 430 -EELS------ACTIEDCLRAFTTCEVLDDDNKTECRTCRKKQDSTKRLQVFQFPRVLVL 482
Query: 270 WFKRFSSNFTQKVTSPIKFPREGLD---MEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
KRF N +K+ + + FP E D + + + + YDL +H G+
Sbjct: 483 HLKRF-DNSRKKIMTSVDFPLEQFDAGSLAFDYDQVRNPNQHQPVYDLIGACHHSGRMN- 540
Query: 327 YGHYTA 332
+GHY A
Sbjct: 541 FGHYIA 546
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 162/375 (43%), Gaps = 82/375 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS---QG--QLVDALVNFMKM 61
G+ N GNTC++NS LQCL+ TP N +L+ H SK+ QG + + +
Sbjct: 112 GLQNLGNTCFLNSALQCLTYTPPLANYMLS-----HEHSKTCHEQGFCMMCTMQSHITQA 166
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+ +SGN V+ ++ LR K F Q+DA EFL Y + A+ + NGS
Sbjct: 167 LSNSGN-VIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKAC------LNGSNK 219
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVF-SDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ + T+A+ F IF G LRS V+C NCK S ++ + +++
Sbjct: 220 LD------------------RHTQATTFIHQIFGGYLRSRVKCMNCKGVSDTFDPYLDIT 261
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + K ++ + + P G Y+
Sbjct: 262 LEI---------------------KSAQSINKALEQFVKPEQLDGENAYK---------- 290
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
C CKK K + + R VL L KRF++ K+T +K+P E LD+ Y+S
Sbjct: 291 ----CSKCKKMVPASKRFTVHRASNVLTLSLKRFANFSGGKITKEVKYP-EYLDIRPYMS 345
Query: 301 -ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+G + Y L AV H G + GHY Y + G+WY +D+ VS D +TV
Sbjct: 346 QPNGEPI----IYALYAVLVHTGFSCHAGHYYCYI-KASNGQWYQMNDSTVSNSDIRTVL 400
Query: 360 SAEAEHGAYILVYQR 374
+ + AY+L Y R
Sbjct: 401 NQQ----AYVLFYIR 411
>gi|355570050|gb|EHH25577.1| hypothetical protein EGK_21432 [Macaca mulatta]
Length = 914
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK + RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|383410867|gb|AFH28647.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|383410869|gb|AFH28648.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK + RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|392355526|ref|XP_003752062.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
norvegicus]
Length = 912
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 550 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 604
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 605 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 660
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 661 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 702
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P G+ S R S+ S + PG TL +CL +F
Sbjct: 703 ISLDLP---GSCTSFWPMSPGRESSLNGESHI------------PGVTTLTDCLRRFTRP 747
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 748 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 806
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S R+ + Y L AV NH G T GHYT++ R
Sbjct: 807 LDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 864
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 865 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 895
>gi|392343086|ref|XP_003754792.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like [Rattus
norvegicus]
Length = 837
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 475 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 529
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 530 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 585
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 586 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 627
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P G+ S R S+ S + PG TL +CL +F
Sbjct: 628 ISLDLP---GSCTSFWPMSPGRESSLNGESHI------------PGVTTLTDCLRRFTRP 672
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 673 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 731
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S R+ + Y L AV NH G T GHYT++ R
Sbjct: 732 LDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 789
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 790 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 820
>gi|371944853|gb|AEX62674.1| putative ubiquitin carboxyl-terminal hydrolase [Moumouvirus Monve]
Length = 442
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 180/438 (41%), Gaps = 86/438 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAF-------------------RNVL-------LNE 37
GL GI N GNTCY+NS +Q L++ RN+L L E
Sbjct: 21 GLTGIQNLGNTCYMNSAIQALAHNHVLINYMFNNKNEIFKILLKNARNILKDSNKFQLTE 80
Query: 38 D--IPIHPDSKSQG-----QLVDA--------------LVNFMKMMWSSGNLVLNTKAIL 76
D IP+ K Q ++D L+ ++ MW +V+ T +
Sbjct: 81 DNIIPLALKKKIQDPQYNYSMLDKNEINIVLNNTITVQLIRLLEYMWKDNCIVIPTSFRV 140
Query: 77 LALRSYTKKFDGNQQQDAQE----FLLYLLAALNEEAKVVPDQYNGSTYS------NTSS 126
+ + K F GN+ DA+E + ++ L E+ + N + S N
Sbjct: 141 IFSEARNKFFYGNEHHDAEEAYTCIVQKIMEELAEKKNIKFRMQNENVMSLIQFTQNMRE 200
Query: 127 KQVGSFRALH---YWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + + A+ +++Q +++ +I + S+++ + S V E+F
Sbjct: 201 EILKAKDAIERDRLSKQYQEKISTMPQEILMINSYSTMKKYYGESYSHVMEMFTGFQ--- 257
Query: 184 PPGGGTLYECQLRSSVRCSN--CKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
SS+ C N C S +E F L+LP+P + +CL ++F E L
Sbjct: 258 ------------HSSLNCPNNTCGYVSNKFEPFTHLALPLPADMTNIDQCLQEYFKEEVL 305
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
N TC CK +K + LP VL++ KRF+ K +KFP + D+
Sbjct: 306 DNDNSWTCDKCKNNVRAIKKLTLWTLPHVLVIQLKRFNIFRQSKDNRIVKFPMDDFDISK 365
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
YIS + + Y L + NH G +GHY Y +WY+++D +VSP+ +
Sbjct: 366 YISPNQLEPINNSKYKLQCIINHTGGLN-HGHYFTYNLDINMDKWYVFNDDMVSPISHER 424
Query: 358 VESAEAEHGAYILVYQRR 375
V + AY+L Y R+
Sbjct: 425 VITP----SAYLLFYVRQ 438
>gi|109110028|ref|XP_001107144.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Macaca
mulatta]
Length = 914
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLARLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK + RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|380809004|gb|AFE76377.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|380809006|gb|AFE76378.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942948|gb|AFI35079.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942950|gb|AFI35080.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK + RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|402896308|ref|XP_003911245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Papio anubis]
gi|402896310|ref|XP_003911246.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Papio anubis]
Length = 914
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK + RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|223997540|ref|XP_002288443.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975551|gb|EED93879.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 341
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 157/386 (40%), Gaps = 60/386 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVDAL 55
G G+ N GNTCY NS +QCLS P R+ LL N D P+ + G+L++
Sbjct: 1 GACGLINLGNTCYANSGIQCLSYLPLLRSYLLSGQFKGDLNRDNPLG----TGGKLLEEF 56
Query: 56 VNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP-- 113
M++MWS V + L ++ G QQDAQE + ++ L+E+ V
Sbjct: 57 AELMQVMWSGKYGVRAPQKFRSFLGKCRPQYSGADQQDAQELINDMIDMLHEDGNRVKKK 116
Query: 114 ---DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
+ T +VG W +F S SD+ +GQ+ +SV C C +S
Sbjct: 117 PYVEALEDKFIEKTDLPRVGQ----EAWRRFLRRNRSAVSDLSMGQVYNSVTCPVCNHSS 172
Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
++ F LSLP P +++C + VR + +R V +
Sbjct: 173 KNFDPFNMLSLPFPTVAEVIFQCTV---VRRATEQRLDAV-------------------D 210
Query: 231 CLNKFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKF 288
C C CK + + + LP +L KRF SS + +K+++ + F
Sbjct: 211 CWR-----------CPVCKVDREGKQSMALWNLPDLLTFHLKRFNASSRWREKISTKVDF 259
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P GL+M + +E T + + K + + + W +DD
Sbjct: 260 PLTGLNMREWCDKESPLLEEETTPTGWRLGRNKEKDSSSTAASKGVAKSAEPLWLQFDDD 319
Query: 349 VVSPVDAQTVESAEAEHGAYILVYQR 374
+V P+ + V S AY+L Y+R
Sbjct: 320 LVEPLPPRNVVS----ETAYVLFYRR 341
>gi|403298497|ref|XP_003940054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Saimiri
boliviensis boliviensis]
Length = 915
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYATQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNVGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPAVATVALME 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|296191006|ref|XP_002743440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Callithrix
jacchus]
Length = 1058
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSV------- 199
SV SDIF G + S V+C C R ST E F +LSLP+P G +L S++
Sbjct: 586 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP---GKEDLAKLHSAIYQNVPAK 642
Query: 200 --RCSNCKRT----STVYEIFWELSLPVPPGGG-----TLYECLNKFFNGETLHN----T 244
C + T + + E + P TL +CL FF + L +
Sbjct: 643 PGTCGDSYATQGWLAFIVEYIRRFVVSCTPSWFWGPVITLEDCLAAFFAADELKGDNMYS 702
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISAS 302
C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +++
Sbjct: 703 CERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKE 762
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V++AE
Sbjct: 763 C--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE 819
Query: 363 AEHGAYILVYQR 374
Y+L Y++
Sbjct: 820 ----GYVLFYRK 827
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 286 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 343
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 344 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPAVATVTLME 402
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 403 ARDSDSSDTDEKREG 417
>gi|154274702|ref|XP_001538202.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414642|gb|EDN10004.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1099
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 177/414 (42%), Gaps = 88/414 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK-----SQGQLVDALVNFMKM 61
G+ N G+TCY+N+++QCLS T + D H + SQG L N ++
Sbjct: 726 GLVNMGSTCYMNAIIQCLSVTVQLTKFFI--DNRFHSQVQKNWKGSQGILPGLFANLVRS 783
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+W + V+ + + ++ G++QQDA+EF LL L+E+ + +N +
Sbjct: 784 LWKNDVEVIRPTSFRNFIGRLNPEWAGSRQQDAKEFFDVLLDCLHEDLNL---NWNRTPL 840
Query: 122 SNTSSKQVGSFRALHY-------WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
+++Q + W ++ E S S +F GQ S +RC C+RTST
Sbjct: 841 RPLTTEQEMRREQMPIEQVSTIEWNRYCHREYSYISSLFAGQHASRLRCRTCRRTST--- 897
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP----PGGGTLYE 230
YE F+ +S+ +P G G LY+
Sbjct: 898 -----------------------------------TYEAFFSISVEIPTSPASGAGDLYQ 922
Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNF--TQKVT 283
CLN + E L C YC+ + + K + R P L++ FKRFS S + T+K+
Sbjct: 923 CLNSYCQEEMLSGDEVWKCPYCRSEREATKQIILTRAPRFLVIHFKRFSLSRYQQTRKIH 982
Query: 284 SPIKFPREGLDMEYYI-------SASGRRVESR-------------YTYDLCAVSNHIGK 323
+ I FP GLD+ ++ SA R + Y Y+ + HIG
Sbjct: 983 TAINFPITGLDITSFMAPPIRTSSAPNGRTDGNNNQLQPELATTPPYIYNAYGIVRHIGS 1042
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQRR 375
++ GHY + R + G W +DD V+ + ++ A++ AY++ Y+R+
Sbjct: 1043 SSSEGHYISLVRDDRRGCWRKFDDQRVTDFNPMGLKPADSLQNDQAYLVFYERK 1096
>gi|355752999|gb|EHH57045.1| hypothetical protein EGM_06605 [Macaca fascicularis]
Length = 914
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK + RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274
>gi|350579707|ref|XP_001929239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Sus
scrofa]
Length = 914
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 123/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ +LP +L + KRF ++ K++S + FP EGLD+ +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLQLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPF 615
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETLV 672
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 673 QNAE----AYVLFYRK 684
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 144 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVTEVW 201
Query: 64 --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 202 HRKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 249
>gi|344292651|ref|XP_003418039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Loxodonta africana]
Length = 914
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 171/398 (42%), Gaps = 78/398 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 552 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 606
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 607 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 662
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 663 KAASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 704
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 705 ISLDLPGSCTSFWPV---SPGRESSVNGESHI------------PGITTLTDCLRRFTRP 749
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L + C C+ + K + +LP V FKRF + Q K+T+ I FP E
Sbjct: 750 EHLGSNAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 808
Query: 293 LDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCRRE 337
LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 809 LDMTPFMASSK---ESRMNGQLQLPTSSGNNENKYSLFAVVNHQG-TLESGHYTSFIRHH 864
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 865 -KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 897
>gi|344271628|ref|XP_003407639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Loxodonta
africana]
Length = 911
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 123/256 (48%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R ST E F +LSLP+P PG
Sbjct: 440 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGT 499
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 500 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 552
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ + + FP EGLD+ +
Sbjct: 553 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINNHVSFPLEGLDLRPF 612
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ + TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 613 LAKEC--MSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 669
Query: 359 ESAEAEHGAYILVYQR 374
++AE AY+L Y++
Sbjct: 670 QNAE----AYVLFYRK 681
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|291414911|ref|XP_002723699.1| PREDICTED: ubiquitin thiolesterase 22 [Oryctolagus cuniculus]
Length = 529
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 161/378 (42%), Gaps = 57/378 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 332 PGCSTPFWPLSPGSEGSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 377
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494
Query: 346 DDTVVSPVDAQTVESAEA 363
DD +++ + V +E
Sbjct: 495 DDAIITKASIKDVLDSEG 512
>gi|348553656|ref|XP_003462642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Cavia
porcellus]
Length = 806
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 171/400 (42%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 444 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 498
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 499 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 557
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 558 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 594
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P + + S + TS E PG TL +CL +F
Sbjct: 595 WDISLDLPGSCTSFWP--------MSPGRETSVNGESHI-------PGITTLTDCLRRFT 639
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 640 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 699
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 700 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 754
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 755 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 789
>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
Length = 545
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 160/372 (43%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + + ++S DIF G RS ++C +C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSEPTSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + +V + W+ ++ GE
Sbjct: 198 LDI---------------------SSAQSVNQALWDTE-------------KSEELRGEN 223
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
+ C C+++ K I P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 224 AY-YCGRCRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY +Y + G G+WY DDT V+ D +V
Sbjct: 282 ---QPTGGPLPYALYAVLVHEGATCHSGHYFSYV-KAGHGKWYKMDDTKVTSCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|441432438|ref|YP_007354480.1| peptidase C19 subfamily protein [Acanthamoeba polyphaga
moumouvirus]
gi|440383518|gb|AGC02044.1| peptidase C19 subfamily protein [Acanthamoeba polyphaga
moumouvirus]
Length = 442
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 179/438 (40%), Gaps = 86/438 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAF-------------------RNVLLNED------ 38
GL GI N GNTCY+NS +Q L++ RN+L + D
Sbjct: 21 GLTGIQNLGNTCYMNSAIQALAHNHVLINYMFNNKNEIFKILLKNARNILKDSDKFQLTE 80
Query: 39 ---IPIHPDSKSQG-----QLVDA--------------LVNFMKMMWSSGNLVLNTKAIL 76
IP+ K Q ++D L+ ++ MW +V+ T +
Sbjct: 81 ENIIPLALKKKIQDPQYNYSMLDKNEINIVLNNTITVQLIRLLEYMWKDNCIVIPTSFRV 140
Query: 77 LALRSYTKKFDGNQQQDAQE----FLLYLLAALNEEAKVVPDQYNGSTYS------NTSS 126
+ + K F GN+ DA+E + ++ L E+ + N + S N
Sbjct: 141 IFSEARNKFFYGNEHHDAEEAYTCIVQKIMEELAEKKNIKFRMQNENVMSLIQFTQNMRE 200
Query: 127 KQVGSFRALH---YWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + + A+ +++Q +++ +I + S+++ + S V E+F
Sbjct: 201 EILKAKDAIERDRLSKQYQEKISTMPQEILMINSYSTMKKYYGESYSHVMEMFTGFQ--- 257
Query: 184 PPGGGTLYECQLRSSVRCSN--CKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
SS+ C N C S +E F L+LP+P + +CL ++F E L
Sbjct: 258 ------------HSSLNCPNNTCGYVSNKFEPFTHLALPLPADMINIDQCLQEYFKEEVL 305
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
N TC CK +K + LP VL++ KRF+ K +KFP + D+
Sbjct: 306 DNDNSWTCDKCKNNVRAIKKLTLWTLPHVLVIQLKRFNIFRQSKDNRIVKFPMDDFDISK 365
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
YIS + + Y L + NH G +GHY Y +WY+++D +VSP+ +
Sbjct: 366 YISPNQLEPINNSKYKLQCIINHTGGLN-HGHYFTYNLDINMDKWYVFNDDMVSPISHER 424
Query: 358 VESAEAEHGAYILVYQRR 375
V + AY+L Y R+
Sbjct: 425 VITP----SAYLLFYVRQ 438
>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 160/372 (43%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + + ++S DIF G RS ++C +C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSEPTSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + +V + W+ ++ GE
Sbjct: 198 LDI---------------------SSAQSVNQALWDTE-------------KSEELRGEN 223
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
+ C C+++ K I P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 224 AY-YCGRCRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY +Y + G G+WY DDT V+ D +V
Sbjct: 282 ---QPTGGPLPYALYAVLVHEGATCHSGHYFSYV-KAGHGKWYKMDDTKVTSCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 414
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 163/393 (41%), Gaps = 88/393 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + P K L+ L + + +
Sbjct: 85 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRKKE--SLLTCLSDLFNSIATQK 140
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 141 KKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKK--QEKQNGKL 198
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
Q GS + E+ T+ + +IF G L + RC NC+ S+ E F +LS
Sbjct: 199 -------QNGSIES----EEGDKTDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLS 247
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 248 VDVE--------------------QNTSITH-------------------CLRGFSNTET 268
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 269 LCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP-- 325
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY + G W L+DD +V
Sbjct: 326 -LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVE 381
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 382 KIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 413
>gi|308505570|ref|XP_003114968.1| CRE-USP-3 protein [Caenorhabditis remanei]
gi|308259150|gb|EFP03103.1| CRE-USP-3 protein [Caenorhabditis remanei]
Length = 547
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 161/375 (42%), Gaps = 70/375 (18%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++N+VLQ L++ FR +++ +P D +L +G
Sbjct: 231 GLRNIGNTCFMNAVLQALASIYDFREYIMS--LPSLEDYVEDEKL-----------SKNG 277
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
N L D LL ++A N P+++ + S
Sbjct: 278 NCFLT---------------------DEYRKLLISMSAKNYRDPTAPNEFREAFVS---- 312
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
A + F+ ++ F + QL + +R C+ + + + P+
Sbjct: 313 -------ACPRFRGFRQHDSHEFLRYLLDQLNTEMR--KCRHLPDMPD---DKVTPI--- 357
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP---PGGGTLYECLNKFFNGETLHN 243
+E L+SSV C C+ S + F +LSL VP L +CL+ FF E L
Sbjct: 358 -SKHFEGILQSSVICQTCRNCSNKMDEFMDLSLDVPRLSKARIRLSDCLDLFFQKELLEK 416
Query: 244 ----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYI 299
C CK + K I++LP VL L KRF N K+ + I+FP GL ++ ++
Sbjct: 417 GEKPECSKCKSKQTCSKQMFIKKLPDVLCLHIKRFRDN-GGKIDTLIEFPMAGLSVDDFL 475
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ E YDL ++ HIG GHY A+ RR +WY +DDTVV PVD V
Sbjct: 476 TEDSD--EPPCVYDLQSIIVHIGYGCSSGHYIAFGRR--GQKWYQFDDTVVKPVDTSLV- 530
Query: 360 SAEAEHGAYILVYQR 374
++ AY+L+Y +
Sbjct: 531 ---SKQKAYVLMYTK 542
>gi|320039888|gb|EFW21822.1| ubiquitin C-terminal hydrolase [Coccidioides posadasii str. Silveira]
Length = 1079
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 180/414 (43%), Gaps = 83/414 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK-SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++Q LS T N + + K SQG L N ++ +W
Sbjct: 699 GLVNFGSTCYMNSIIQSLSATTELTKFFFNNHFHTVVQKNWKGSQGVLPGLYANLVRSLW 758
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G+QQQDA+EF L+ L+E+ V +
Sbjct: 759 KNDVEVIRPTSFRKFIGRLNSEWAGSQQQDAKEFFDVLVDCLHEDLNV--NWQRTPLRPL 816
Query: 124 TSSKQVGSFR-ALHY-----WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
T+ +++ R +H W ++ E S S +F GQ S +RC+ C+RTST YE F+
Sbjct: 817 TTEQEMRRERMPIHQVSGIEWNRYCHREFSYISSLFAGQHASRLRCTTCRRTSTTYEAFY 876
Query: 178 ELSLPVPPGG-GTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+S+ +PP G G +Y+C LRS C +
Sbjct: 877 SISVEIPPSGKGDIYQC-LRSY--------------------------------CQEEML 903
Query: 237 NGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGL 293
+G+ + C +C+ + + K + R P LIL FKRFS++ Q K+ +P+ FP GL
Sbjct: 904 SGDEVWK-CPHCRTEREATKQIILTRAPQFLILHFKRFSASHRQQARKIHTPVYFPLSGL 962
Query: 294 DMEYY------------------------------ISASGRRVESRYTYDLCAVSNHIGK 323
DM + +S + S + Y+ AV H+G
Sbjct: 963 DMTPFMIQPPSTPPSQPQPNGNPAQTSAVSQSQTELSPNDLATSSPFIYNAYAVVRHLGS 1022
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
T GHY + R W +DD V+ P + + + ++E AY++ Y+R
Sbjct: 1023 TIHEGHYISLVRDANRDCWRKFDDHRVTDFQPGNPGSSDCLQSEQ-AYLVFYER 1075
>gi|348540585|ref|XP_003457768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Oreochromis niloticus]
Length = 372
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 159/392 (40%), Gaps = 83/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + P K L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRRKE--SLLTCLADLFNSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A L +E K Q NG
Sbjct: 96 KKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKSQERQQNGKLG 155
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ + T+ + +IF G L + RC NC+ S+ E F +LS+
Sbjct: 156 GGGGGGEGEGGKE---------TQQTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSV 206
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 207 DVE--------------------QNTSITH-------------------CLRGFSNTETL 227
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 228 CSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 283
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY + G W L+DD +V
Sbjct: 284 LELRLF-NTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVEK 340
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 341 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 371
>gi|189238741|ref|XP_972079.2| PREDICTED: similar to AGAP003821-PA [Tribolium castaneum]
Length = 928
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 123/250 (49%), Gaps = 28/250 (11%)
Query: 140 KFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECQLRS 197
K Q S+ SDIF G+L SSV+C C R S+ E F +LSLP+P L+
Sbjct: 380 KKQQKYRSIISDIFDGKLLSSVQCLTCDRVSSCVETFQDLSLPIPSRDHLVVLHGRTTGP 439
Query: 198 SVRCSNCKRTSTVYEIFWELSL-------PVPPGGGTLYECLNKFFNGETLHN----TCQ 246
+ CS I W L+ PV TL++CL FF+ + L +C+
Sbjct: 440 TATCSEAVIPMNEGWISWILAWLKSWFYGPVV----TLHDCLAAFFSTDELKGDNMYSCE 495
Query: 247 YCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGR 304
C K + +K ++ +LP VL + KRF F+ K++S + FP +GLDM Y+
Sbjct: 496 KCNKLRNGIKFSKVLQLPEVLCIHLKRFRHELMFSSKISSAVSFPLKGLDMRPYLHTDC- 554
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
+ TY+L +V H G TA GHY Y G+WY +DD V+ V + V+S E
Sbjct: 555 -ISKVTTYELFSVICHYG-TAGGGHYICYAL--NGGQWYEFDDQYVTRVPPEKVQSCE-- 608
Query: 365 HGAYILVYQR 374
AY+L Y++
Sbjct: 609 --AYVLFYRK 616
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+N+ LQ LSN L + I + K G L ++
Sbjct: 173 GLVGLQNIGNTCYMNAALQALSNAIPLTRFFLECATTVQILSEGKKPG-LSRTYQTLIRD 231
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-VVPDQYNGST 120
MW + IL +RS F G Q D QEFL + L+EE K V P + T
Sbjct: 232 MWKKNGGYVTPSGILYGIRSVYPMFRGYYQHDTQEFLRNFMDQLHEELKQVAPPEVATMT 291
Query: 121 YSNTSS 126
S+T S
Sbjct: 292 DSDTFS 297
>gi|328768319|gb|EGF78366.1| hypothetical protein BATDEDRAFT_90897 [Batrachochytrium
dendrobatidis JAM81]
Length = 320
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 131/288 (45%), Gaps = 55/288 (19%)
Query: 96 EFLLYLLAALNEE---AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDI 152
+FL +LL L+E+ + Y Y +++Q + + W +++ S DI
Sbjct: 74 KFLRFLLDGLHEDVNTGRPTKFSYTDEQYDQLTTRQ----KTIVSWNRYKKFNNSPICDI 129
Query: 153 FVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYE 212
F GQL+S+V C C+ TST ++ FW++S P+
Sbjct: 130 FSGQLQSTVTCLECQTTSTTFDTFWDISAPLISS-------------------------- 163
Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWF 271
+L + G TL +CL+ FF E L C CK + +K I RLP VL++
Sbjct: 164 -----NLHLDQDGVTLDQCLDSFFEAEKLDTYRCGKCKCDTLAIKQLGISRLPSVLVIHL 218
Query: 272 KRF-----SSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
KRF + ++K+ + + FP M Y S + YDL AVSNH G+
Sbjct: 219 KRFQVLPLTDIPSRKLHTMVTFPIHQFTMNAYTSEL-----TSAEYDLVAVSNHSGELH- 272
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPV-DAQTVESAEAEHGAYILVYQ 373
GHYT++ R TG W+L+ D++ S D + +S + AY+L YQ
Sbjct: 273 GGHYTSHTRNTDTGHWHLWSDSIGSQCNDLEFTQSRD----AYVLFYQ 316
>gi|402856872|ref|XP_003893003.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 21 [Papio anubis]
Length = 670
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 122/287 (42%), Gaps = 56/287 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 240 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 299
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 300 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 359
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
NG S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 360 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 417
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 418 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 447
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLIL 269
+C N F E L + C C++++ K +QR P +L+L
Sbjct: 448 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVL 491
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 269 LWFKRFSSNF--TQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
L RFS++ +K + + FP + L + + S Y L A+ NH G +
Sbjct: 566 LDLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVH 620
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
YGHYTA CR + TG W++Y+D+ VSPV V S+E Y+L YQ
Sbjct: 621 YGHYTALCRCQ-TG-WHVYNDSRVSPVSXNQVASSE----GYVLFYQ 661
>gi|119193700|ref|XP_001247456.1| hypothetical protein CIMG_01227 [Coccidioides immitis RS]
Length = 1017
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 83/414 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK-SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++Q LS T N + + K SQG L N ++ +W
Sbjct: 637 GLVNFGSTCYMNSIIQSLSATTELTKFFFNNHFHTVVQKNWKGSQGVLPGLYANLVRSLW 696
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G+QQQDA+EF L+ L+E+ V +
Sbjct: 697 KNDVEVIRPTSFRKFIGRLNSEWAGSQQQDAKEFFDVLVDCLHEDLNV--NWQRTPLRPL 754
Query: 124 TSSKQVGSFR-ALHY-----WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
T+ +++ R +H W ++ E S S +F GQ S +RC+ C+RTST YE F+
Sbjct: 755 TTEQEMRRERMPIHQVSGIEWNRYCHREFSYISSLFAGQHASRLRCTTCRRTSTTYEAFY 814
Query: 178 ELSLPVPPGG-GTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+S+ +PP G G +Y+C LRS C +
Sbjct: 815 SISVEIPPSGKGDIYQC-LRSY--------------------------------CQEEML 841
Query: 237 NGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGL 293
+G+ + C +C+ + + K + R P L+L FKRFS++ Q K+ +P+ FP GL
Sbjct: 842 SGDEVWK-CPHCRTEREATKQIILTRAPQFLVLHFKRFSASHRQQARKIHTPVYFPLSGL 900
Query: 294 DMEYY------------------------------ISASGRRVESRYTYDLCAVSNHIGK 323
DM + +S + S + Y+ AV H+G
Sbjct: 901 DMTPFMIQPPSTPPSQPQPNGNPAQTSAVSQSQTELSPNDLATSSPFIYNAYAVVRHLGS 960
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
T GHY + R W +DD V+ P + + + ++E AY++ Y+R
Sbjct: 961 TIHEGHYISLVRDANRDCWRKFDDHRVTDFQPGNPGSSDCLQSEQ-AYLVFYER 1013
>gi|270011227|gb|EFA07675.1| hypothetical protein TcasGA2_TC030699 [Tribolium castaneum]
Length = 791
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 123/250 (49%), Gaps = 28/250 (11%)
Query: 140 KFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG--TLYECQLRS 197
K Q S+ SDIF G+L SSV+C C R S+ E F +LSLP+P L+
Sbjct: 231 KKQQKYRSIISDIFDGKLLSSVQCLTCDRVSSCVETFQDLSLPIPSRDHLVVLHGRTTGP 290
Query: 198 SVRCSNCKRTSTVYEIFWELSL-------PVPPGGGTLYECLNKFFNGETLHN----TCQ 246
+ CS I W L+ PV TL++CL FF+ + L +C+
Sbjct: 291 TATCSEAVIPMNEGWISWILAWLKSWFYGPV----VTLHDCLAAFFSTDELKGDNMYSCE 346
Query: 247 YCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGR 304
C K + +K ++ +LP VL + KRF F+ K++S + FP +GLDM Y+
Sbjct: 347 KCNKLRNGIKFSKVLQLPEVLCIHLKRFRHELMFSSKISSAVSFPLKGLDMRPYLHTDC- 405
Query: 305 RVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAE 364
+ TY+L +V H G TA GHY Y G+WY +DD V+ V + V+S E
Sbjct: 406 -ISKVTTYELFSVICHYG-TAGGGHYICYAL--NGGQWYEFDDQYVTRVPPEKVQSCE-- 459
Query: 365 HGAYILVYQR 374
AY+L Y++
Sbjct: 460 --AYVLFYRK 467
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN--EDIPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+N+ LQ LSN L + I + K G L ++
Sbjct: 24 GLVGLQNIGNTCYMNAALQALSNAIPLTRFFLECATTVQILSEGKKPG-LSRTYQTLIRD 82
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-VVPDQYNGST 120
MW + IL +RS F G Q D QEFL + L+EE K V P + T
Sbjct: 83 MWKKNGGYVTPSGILYGIRSVYPMFRGYYQHDTQEFLRNFMDQLHEELKQVAPPEVATMT 142
Query: 121 YSNTSS 126
S+T S
Sbjct: 143 DSDTFS 148
>gi|387019715|gb|AFJ51975.1| Ubiquitin specific peptidase 46 [Crotalus adamanteus]
Length = 369
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 159/391 (40%), Gaps = 84/391 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + L D + G
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQARKKETLLTCLSDLFNSIATQKKKVG 99
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGSTYS 122
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 100 --VIPPKRFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKK--QEKQNGKL-- 153
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
Q GS + ++ + E + +IF G L + RC NC+ S+ E F +LS+
Sbjct: 154 -----QNGSIES----DEGEKAELTWVHEIFQGALTNETRCLNCEAVSSKDEDFLDLSVD 204
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
V + TS + CL F N ETL
Sbjct: 205 VE--------------------QNTSITH-------------------CLRGFSNTETLC 225
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREGL 293
+ C+ C+ + + K +++LP +L L KRF +T K++ + FP L
Sbjct: 226 SEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP---L 281
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
++ + + SG YDL AV H G GHY + G W L+DD +V +
Sbjct: 282 ELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVEKI 338
Query: 354 DAQTVE---------SAEAEHGAYILVYQRR 375
DAQ +E S +E G YIL YQ R
Sbjct: 339 DAQAIEEFYGLTSDISKNSESG-YILFYQSR 368
>gi|281346341|gb|EFB21925.1| hypothetical protein PANDA_019055 [Ailuropoda melanoleuca]
Length = 511
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 160/378 (42%), Gaps = 57/378 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 171 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 229
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 230 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 286
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 287 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 328
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + L S S V G TL +CL +F E L +
Sbjct: 329 PGSSTPFWP--LSPGSEGSVVNGESHV------------AGTTTLTDCLRRFTRPEHLGS 374
Query: 244 ----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
C C + K ++++P V KRF S+ +K+T+ + FP E LDM
Sbjct: 375 GAKIKCSGCHSYQESTKQLTMKKVPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 433
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 434 FMASSKESRMNGQYQQLTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 491
Query: 346 DDTVVSPVDAQTVESAEA 363
DD +++ + V +E
Sbjct: 492 DDAIITKASIEDVLDSEG 509
>gi|392863302|gb|EAS35964.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
Length = 1117
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 83/414 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK-SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++Q LS T N + + K SQG L N ++ +W
Sbjct: 737 GLVNFGSTCYMNSIIQSLSATTELTKFFFNNHFHTVVQKNWKGSQGVLPGLYANLVRSLW 796
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G+QQQDA+EF L+ L+E+ V +
Sbjct: 797 KNDVEVIRPTSFRKFIGRLNSEWAGSQQQDAKEFFDVLVDCLHEDLNV--NWQRTPLRPL 854
Query: 124 TSSKQVGSFR-ALHY-----WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
T+ +++ R +H W ++ E S S +F GQ S +RC+ C+RTST YE F+
Sbjct: 855 TTEQEMRRERMPIHQVSGIEWNRYCHREFSYISSLFAGQHASRLRCTTCRRTSTTYEAFY 914
Query: 178 ELSLPVPPGG-GTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+S+ +PP G G +Y+C LRS C +
Sbjct: 915 SISVEIPPSGKGDIYQC-LRSY--------------------------------CQEEML 941
Query: 237 NGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGL 293
+G+ + C +C+ + + K + R P L+L FKRFS++ Q K+ +P+ FP GL
Sbjct: 942 SGDEVWK-CPHCRTEREATKQIILTRAPQFLVLHFKRFSASHRQQARKIHTPVYFPLSGL 1000
Query: 294 DMEYY------------------------------ISASGRRVESRYTYDLCAVSNHIGK 323
DM + +S + S + Y+ AV H+G
Sbjct: 1001 DMTPFMIQPPSTPPSQPQPNGNPAQTSAVSQSQTELSPNDLATSSPFIYNAYAVVRHLGS 1060
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
T GHY + R W +DD V+ P + + + ++E AY++ Y+R
Sbjct: 1061 TIHEGHYISLVRDANRDCWRKFDDHRVTDFQPGNPGSSDCLQSEQ-AYLVFYER 1113
>gi|303311857|ref|XP_003065940.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105602|gb|EER23795.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1117
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 180/414 (43%), Gaps = 83/414 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK-SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++Q LS T N + + K SQG L N ++ +W
Sbjct: 737 GLVNFGSTCYMNSIIQSLSATTELTKFFFNNHFHTVVQKNWKGSQGVLPGLYANLVRSLW 796
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G+QQQDA+EF L+ L+E+ V +
Sbjct: 797 KNDVEVIRPTSFRKFIGRLNSEWAGSQQQDAKEFFDVLVDCLHEDLNV--NWQRTPLRPL 854
Query: 124 TSSKQVGSFR-ALHY-----WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
T+ +++ R +H W ++ E S S +F GQ S +RC+ C+RTST YE F+
Sbjct: 855 TTEQEMRRERMPIHQVSGIEWNRYCHREFSYISSLFAGQHASRLRCTTCRRTSTTYEAFY 914
Query: 178 ELSLPVPPGG-GTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+S+ +PP G G +Y+C LRS C +
Sbjct: 915 SISVEIPPSGKGDIYQC-LRSY--------------------------------CQEEML 941
Query: 237 NGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGL 293
+G+ + C +C+ + + K + R P L+L FKRFS++ Q K+ +P+ FP GL
Sbjct: 942 SGDEVWK-CPHCRTEREATKQIILTRAPQFLVLHFKRFSASHRQQARKIHTPVYFPLSGL 1000
Query: 294 DMEYY------------------------------ISASGRRVESRYTYDLCAVSNHIGK 323
DM + +S + S + Y+ AV H+G
Sbjct: 1001 DMTPFMIQPPSTPPSQPQPNGNPAQTSAVSQSQTELSPNDLATSSPFIYNAYAVVRHLGS 1060
Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVS---PVDAQTVESAEAEHGAYILVYQR 374
T GHY + R W +DD V+ P + + + ++E AY++ Y+R
Sbjct: 1061 TIHEGHYISLVRDANRDCWRKFDDHRVTDFQPGNPGSSDCLQSEQ-AYLVFYER 1113
>gi|410049168|ref|XP_003952700.1| PREDICTED: LOW QUALITY PROTEIN: inactive ubiquitin
carboxyl-terminal hydrolase 50 [Pan troglodytes]
Length = 332
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 151/333 (45%), Gaps = 51/333 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCL-SNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMM 62
G+ G+ N GNTC +N++LQCL S P L + I + S+ + A M M
Sbjct: 42 GVTGLWNLGNTCCVNAILQCLCSILPLVEYFLTGKYITALQNDCSE--VATAFAYLMTDM 99
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
W + ++ + AL + F QQDAQEFL+ L L E K +Y+ YS
Sbjct: 100 WLGDSDCVSPEIFWSALGNLYPAFTKKMQQDAQEFLICXLNELYEALK----KYH---YS 152
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
+ GS + K+ TTE SV + +F QL S+ C C++ + E+F SLP
Sbjct: 153 RRRPYEKGSTQRC--CRKWITTETSVITQLFEEQLNYSIVCLKCEKCTYKNEVFTVFSLP 210
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+P + YEC LR ++C F + +L +N E +H
Sbjct: 211 IP----SKYECSLRDCLQC-----------FFQQDALT---------------WNNE-IH 239
Query: 243 NTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDMEYYIS 300
C +C+ + + I + P ++I KRF T +K+ + I +P LD+ YI
Sbjct: 240 --CSFCETKQETAVRASISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYIC 297
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAY 333
+ R+ Y+LC+V NH G GHYTA+
Sbjct: 298 SIFRKYPK---YNLCSVVNHFGDLD-GGHYTAF 326
>gi|395844586|ref|XP_003795039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Otolemur
garnettii]
Length = 924
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 123/259 (47%), Gaps = 48/259 (18%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSV------R 200
SV SDIF G + S V+C C R ST E F +LSLP+ PG L +L S++ +
Sbjct: 453 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPI-PGKEDL--AKLHSAIYQNVPAK 509
Query: 201 CSNCKRT-------------------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
C + S FW PV TL +CL FF + L
Sbjct: 510 PGACGDSYAAQGWLAFIMEYVRWFVVSCTPSWFWG---PV----VTLEDCLTAFFAADEL 562
Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDM 295
+C+ CKK + VK ++ RLP +L + KRF T K++S + FP EGLD+
Sbjct: 563 KGDNMYSCERCKKLRNGVKYCKVLRLPEILCVHLKRFRHEVTYSFKISSHVSFPLEGLDL 622
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V
Sbjct: 623 RPFLAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHE 679
Query: 356 QTVESAEAEHGAYILVYQR 374
V++AE Y+L Y++
Sbjct: 680 TVVQNAE----GYVLFYRK 694
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 154 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 211
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 212 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 259
>gi|189194593|ref|XP_001933635.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187979199|gb|EDU45825.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 517
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 169/395 (42%), Gaps = 86/395 (21%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ-GQLVDALVNFMKMM 62
GL G+ N G TC+++ +LQ L + P RN L+E H + + V ++ M +
Sbjct: 176 GLRGLYNMGQTCFMSVILQTLVHNPFIRNFYLSEG---HKQTDCENASCVSCALDEMFVE 232
Query: 63 WSSGNLVLNTKAILLALRSYT--KKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ S A+ + + S+ + G QQQDA E++ ++L L+ GST
Sbjct: 233 FHSAEKTEGFGAVSMLMGSWLAGEALAGYQQQDAHEYMQFILNTLHLAN-------GGST 285
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ K V F G+L S+V C NC+ +T + + +LS
Sbjct: 286 DDSEDCK-------------------CVVHQTFCGKLSSTVMCDNCRNVTTALDPYMDLS 326
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L VR KR + E E L L +CL +F E
Sbjct: 327 L----------------DVRIQGKKRKQQLAEKGEETPL-------DLRDCLERFTVKEK 363
Query: 241 LHN---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDM 295
L + TC+ C + K I+RLPPVL + KRF + + + K+ +P++FP + LD+
Sbjct: 364 LGSADYTCRNCDSPQNATKQLSIKRLPPVLSIHLKRFEHTKSTSSKIETPVRFPVK-LDI 422
Query: 296 EYYISASGRRVESRYT------------------YDLCAVSNHIGKTALYGHYTAYCRRE 337
Y +A + + T Y+L +V H GK GHY +Y RE
Sbjct: 423 HPYTTAHKAAMRAAKTSGAPPSNHNINSPTNALIYELSSVIVHKGKID-SGHYISY-SRE 480
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
G+ W+++DD+ V V V +AE AY+L Y
Sbjct: 481 GSD-WFMFDDSKVVLVSEAEVLAAE----AYLLFY 510
>gi|328768133|gb|EGF78180.1| hypothetical protein BATDEDRAFT_91033 [Batrachochytrium
dendrobatidis JAM81]
Length = 320
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 53/287 (18%)
Query: 96 EFLLYLLAALNEE---AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDI 152
+FL +LL L+E+ + Y Y +++Q + + W +++ S DI
Sbjct: 74 KFLRFLLDGLHEDVNTGRPTKFSYTDEQYDQLTTRQ----KTIVSWNRYKKFNNSPICDI 129
Query: 153 FVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYE 212
F GQL+S+V C C+ TST ++ FW++S P+
Sbjct: 130 FSGQLQSTVTCLECQTTSTTFDTFWDISAPLISS-------------------------- 163
Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWF 271
+L + G TL +CL+ FF E L C CK + +K I RLP VL++
Sbjct: 164 -----NLHLDQDGVTLDQCLDSFFEAEKLDTYRCGKCKCDTLAIKQLGISRLPSVLVIHL 218
Query: 272 KRF-----SSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
KRF + ++K+ + + FP M Y S + YDL AVSNH G+
Sbjct: 219 KRFQVLPLTDIPSRKLHTMVTFPIHQFTMNAYTSEL-----TSAEYDLVAVSNHSGELH- 272
Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
GHYT++ R TG W+L+ D++ S + +E ++ AY+L YQ
Sbjct: 273 GGHYTSHTRNTDTGHWHLWSDSIGSQCN--DLEFGQSR-DAYVLFYQ 316
>gi|330922653|ref|XP_003299920.1| hypothetical protein PTT_11027 [Pyrenophora teres f. teres 0-1]
gi|311326190|gb|EFQ91982.1| hypothetical protein PTT_11027 [Pyrenophora teres f. teres 0-1]
Length = 984
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 135/324 (41%), Gaps = 75/324 (23%)
Query: 89 NQQQDAQEFLLYLLAALNEEAKVV----PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTT 144
++QQDA+EFL ++L ++E+ + P + T + + A+ W ++Q
Sbjct: 690 DEQQDAKEFLEFVLDYMHEDMNLTWNKPPLKPLTDQEELTRERFPRQYSAMIEWRRYQHR 749
Query: 145 EASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNC 204
+ SV +F GQ S + C C TST YE FW +S+ +P G +C LR
Sbjct: 750 DMSVIGGMFAGQHASQLTCQTCGVTSTTYEAFWSISVEIPREG----QCDLR-------- 797
Query: 205 KRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEI 260
ECL + E L C CKK + +K I
Sbjct: 798 -------------------------ECLQSYCAPERLAGDELWRCPRCKKDREAMKKITI 832
Query: 261 QRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDM------------EYYISASGRR 305
R P L++ FKRFS++ T+ KV +P+ FP + LDM E Y++ + R
Sbjct: 833 TRAPDTLVIHFKRFSASRTESARKVRTPVNFPLQRLDMSPFIEPPMTPEQEAYVAQTARD 892
Query: 306 -------------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
+ + Y+ AV HIG T GHY A+ + + G W ++D +
Sbjct: 893 GPAQLAGVKSDPTMNGPFVYNAYAVIWHIGATLGSGHYVAFVKDKSRGCWRSFNDDKIQD 952
Query: 353 VDAQTVESAE--AEHGAYILVYQR 374
D + + AYI+ Y+R
Sbjct: 953 FDPGNLPAHNRLQNEKAYIVFYER 976
>gi|197101307|ref|NP_001126647.1| ubiquitin carboxyl-terminal hydrolase 20 [Pongo abelii]
gi|75054783|sp|Q5R5Z6.1|UBP20_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|55732232|emb|CAH92820.1| hypothetical protein [Pongo abelii]
Length = 913
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 120/256 (46%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SDIF G + S V+C C R S E F +LSLP+P PG
Sbjct: 442 SVISDIFDGSILSLVQCLTCDRVSATVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGT 501
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 502 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 554
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ RLP +L + KRF ++ K+ S + FP EGLD+ +
Sbjct: 555 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 614
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 615 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 671
Query: 359 ESAEAEHGAYILVYQR 374
++AE Y+L Y++
Sbjct: 672 QNAE----GYVLFYRK 683
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 142 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 199
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
+ V+ T ++ ++ F G QQD QEFL L+ L+EE A V +
Sbjct: 200 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 258
Query: 116 YNGSTYSNTSSKQVG 130
S S+T K+ G
Sbjct: 259 ARDSDSSDTDEKREG 273
>gi|351706550|gb|EHB09469.1| Ubiquitin carboxyl-terminal hydrolase 27 [Heterocephalus glaber]
Length = 438
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 173/401 (43%), Gaps = 84/401 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 130
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 131 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 189
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 190 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 226
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P + + S R ++ S + PG TL +CL +F
Sbjct: 227 WDISLDLPGSCTSFWP---MSPGRETSVNGESHI------------PGITTLTDCLRRFT 271
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 272 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSVKQRRKITTYISFPL 331
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAY-C 334
E LDM ++++S ESR Y L AV NH G T GHYT++ C
Sbjct: 332 E-LDMTPFMASSK---ESRMNGQLQLPTSSGNNENKYSLFAVVNHQG-TLESGHYTSFIC 386
Query: 335 RREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ +W+ DD V++ + V +E Y+L Y ++
Sbjct: 387 HHK--DQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 421
>gi|255719866|ref|XP_002556213.1| KLTH0H07678p [Lachancea thermotolerans]
gi|238942179|emb|CAR30351.1| KLTH0H07678p [Lachancea thermotolerans CBS 6340]
Length = 861
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 162/408 (39%), Gaps = 85/408 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ-------GQLVDALVNFM 59
G+ N GN+CY+N ++QCL T + L++ H + S+ + L++ M
Sbjct: 496 GLTNLGNSCYMNCIIQCLLGTHELTQIFLDDSYKNHVNLNSKLGSKGVLAKYFSQLIHTM 555
Query: 60 KMMWSSGNLVLNTKA--------ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV 111
+ +S + N+ +A S F + QQD QEF +LL L+E+
Sbjct: 556 QQQAASASTKQNSGDKTAVQPLHFKVACGSINSLFRSSSQQDCQEFCQFLLDGLHEDL-- 613
Query: 112 VPDQYNGSTYSNTSSKQVGSFR--------ALHYWEKFQTTEASVFSDIFVGQLRSSVRC 163
+Q G+ S++ R + WE++ TT+ SV D+F GQ S + C
Sbjct: 614 --NQCGGNPALKELSEEAEGIREKLCMRIASSIEWERYLTTDFSVIVDLFQGQYASQLTC 671
Query: 164 SNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 223
C RTST Y+ F LS+PVP G S C
Sbjct: 672 KVCGRTSTTYQPFSVLSVPVPSG---------------SKCD------------------ 698
Query: 224 GGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT 279
+ +C +F ETL +C CK + K I RLP L++ KRF N
Sbjct: 699 ----IIDCFKEFTKVETLEKDEQWSCPRCKCKQPSTKKITITRLPRNLVIHLKRF-DNLL 753
Query: 280 QKVTSPIKFPRE-------GLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALY 327
K + +P D + + + +R + Y+L AV+ H G T
Sbjct: 754 HKNNIFVSYPHTLDLTPFWANDFDGRLPPGVAELPTRGQVPPFNYNLYAVACHFG-TLYG 812
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHYT+Y + W +DDT +Q AY+L Y R+
Sbjct: 813 GHYTSYVDKGDKAGWCYFDDTSWRKAKSQ---GECITLSAYVLFYHRK 857
>gi|395854546|ref|XP_003799748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Otolemur garnettii]
Length = 888
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 171/400 (42%), Gaps = 82/400 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 526 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 580
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
+ ++ SGN + LL L + + G +QQDA EFL+ L L+ K V
Sbjct: 581 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 639
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
N + N + IF G L+S V C C ST +
Sbjct: 640 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 676
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
W++SL +P G+ S R S+ S + I TL +CL +F
Sbjct: 677 WDISLDLP---GSCTSFWPMSPGRESSVNGESHISGIT------------TLTDCLRRFT 721
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 722 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 781
Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++++S ESR Y L AV NH G T GHYT++ R
Sbjct: 782 E-LDMTPFMASS---KESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 836
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V++ + V +E Y+L Y ++
Sbjct: 837 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 871
>gi|350276273|ref|NP_001231910.1| ubiquitin carboxyl-terminal hydrolase 46 [Danio rerio]
gi|251765180|sp|A5WWB0.2|UBP46_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
Length = 370
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 161/393 (40%), Gaps = 83/393 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + K + L+ L + + +
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKV----QQKKKENLLTCLADLFHSIATQK 91
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR FD QQDA EFL YLL L EE K ++ NG
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEERK--QEKQNGRL 149
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+N G+ A + + + +IF G L + RC NC+ S+ E F +LS
Sbjct: 150 KNN------GTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLS 203
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 204 VDVE--------------------QNTSITH-------------------CLRDFSNTET 224
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C + + K +++LP +L L KRF +T K++ + FP
Sbjct: 225 LCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYT-KLSYRVVFP-- 281
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG V YDL AV H G GHY + G W L+DD +V
Sbjct: 282 -LELRLF-NTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVE 337
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 338 KIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 369
>gi|405953224|gb|EKC20928.1| Ubiquitin carboxyl-terminal hydrolase 22 [Crassostrea gigas]
Length = 534
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 164/398 (41%), Gaps = 53/398 (13%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDS-KSQGQLVDALVNFMKMM 62
GL G+ N GNTC++N ++Q L +TP R+ L + S ++Q LV + +
Sbjct: 158 GLRGLINLGNTCFMNCIVQSLIHTPVLRDFFLADKHNCQMTSVEAQQCLVCEMARLFQEF 217
Query: 63 WSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
+ SGN + LL L + + G +QQDA EFL+ L L+ K D S
Sbjct: 218 Y-SGNRTPHIPYRLLHLVWTNARHLAGYEQQDAHEFLIAALDVLHRHCKGYSDNKCLSIN 276
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
+ + + H+ + IF G L+S V C C ST + W++SL
Sbjct: 277 KFFTGRNGMTSGNPHHCN-------CIIDQIFTGGLQSDVTCQECNNVSTTIDPIWDISL 329
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFNG 238
+ PG N PG +L +CL +F
Sbjct: 330 DLGPGAPI------------PNALLNVNNSSSSPSSGFSNSPGTYEPTSLLDCLKRFTKP 377
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREG 292
E L ++ C C + K +++LP V KRF S+ +K+++ + FP E
Sbjct: 378 EHLGSSAKIKCSTCHSYQESTKQLTMKKLPIVACFHLKRFEHSTGLHKKISTFVSFPEE- 436
Query: 293 LDMEYYISA---------------SGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRRE 337
LDM ++S+ S + + Y L AV NH+G T GHYT + R+
Sbjct: 437 LDMTPFMSSSRNNTNGYRNQIVQESAKGLSCDNKYSLFAVVNHMG-TIECGHYTCFIRQH 495
Query: 338 GTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD +++ V +E Y+L Y ++
Sbjct: 496 -KDQWFKCDDHLITKATLNEVLKSE----GYLLFYHKQ 528
>gi|311276366|ref|XP_003135158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Sus
scrofa]
Length = 710
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 169/389 (43%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 360 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 418
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K + G SN
Sbjct: 419 SGNRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---EDSVGQEASN 475
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 476 PNCCNC------------------IIDHIFTGGLQSDVTCQVCHTVSTTIDPCWDISLDL 517
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG + CQ N +R + PG +L +CL F E L +
Sbjct: 518 -PGSCATFSCQ--------NPERADGTVSRDERI-----PGNPSLTDCLQWFTRREHLGS 563
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 564 SAKIKCSSCQSYQESTKQLTMKKLPIVACFHIKRFEHVGKQRRKINTFISFPLE-LDMTP 622
Query: 298 YISASG------RRVESRYT-----YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
++S++ R+ ++ Y Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 623 FLSSTKESKMKERQPQTDYAPIENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 680
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D V++ + + +E Y+L Y ++
Sbjct: 681 DAVITKATIEDLLYSE----GYLLFYHKQ 705
>gi|224142545|ref|XP_002324616.1| predicted protein [Populus trichocarpa]
gi|222866050|gb|EEF03181.1| predicted protein [Populus trichocarpa]
Length = 566
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 177/410 (43%), Gaps = 85/410 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-----IPIHPDSKSQGQLVDALVNF 58
GL G+ N GNTC++NSVLQ L +TP RN L++ G L L
Sbjct: 191 GLRGLNNLGNTCFMNSVLQALLHTPPLRNYFLSDRHNRYYCQQKKSGNENGGLRLCLACD 250
Query: 59 MKMMWS---SGNLVLNTKA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPD 114
M M+S SGN V + A L + + +QQDA EF + +L ++E KV D
Sbjct: 251 MDAMFSAVFSGNPVPYSPAKFLYSWWQHAANLASYEQQDAHEFFISMLDGIHE--KVEKD 308
Query: 115 QYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
++ +T + + +F G LRS V C+ C TST Y+
Sbjct: 309 RH-------------------------KTHDCCIAHRVFSGILRSDVMCTACGFTSTKYD 343
Query: 175 IFWELSLPVPPGGGTLYECQLRSSVRC---SNCKRTSTVYEIFWELSLPVPPGGGTLYEC 231
++SL + P G+ + + C ++C +S G TL C
Sbjct: 344 PCVDISLDLEPYLGSSAKSMSLKTHSCNGEADCTNSSQ------------NGGISTLIGC 391
Query: 232 LNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN----FTQKVT 283
L++F E L + CQ C+ + + +K I++LP V KRF + ++KV
Sbjct: 392 LDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSIRKMSRKVD 451
Query: 284 SPIKFPREGLDMEYYISAS------GRRV------------ESRYTYDLCAVSNHIGKTA 325
++FP LDM Y+S+S G R+ E ++L AV H GK
Sbjct: 452 RYLQFPF-SLDMAPYLSSSILRSRFGNRIFPFDGDEADASNEMSSEFELFAVVTHTGKLD 510
Query: 326 LYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHY Y R + +WY DD+ ++ V+ V +A+ Y++ Y ++
Sbjct: 511 -SGHYVTYLRL--SNQWYKCDDSWITQVNENIVRAAQ----GYMMFYVQK 553
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 162/393 (41%), Gaps = 85/393 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + P K L+ L + + +
Sbjct: 147 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRKKE--SLLTCLSDLFNSIATQK 202
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 203 KKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKK--QEKQNGKL 260
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ + G ++ + + + +IF G L + RC NC+ S+ E F +LS
Sbjct: 261 QNGSLESSGG--------DEGEKGDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLS 312
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 313 VDVE--------------------QNTSITH-------------------CLRGFSNTET 333
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 334 LCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP-- 390
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY + G W L+DD +V
Sbjct: 391 -LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVE 446
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 447 KIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 478
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 170/396 (42%), Gaps = 53/396 (13%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNV--------LLNEDIPIHPDSKSQGQ----LVDA 54
G+ N GNTC++NSVLQ LSN F + ++ H S + +V+
Sbjct: 233 GLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALEMKHKQKAYHSRSMKETMDDVFVVEE 292
Query: 55 LVNFMKMMWSSGN---LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV 111
L + + G+ ++ + + L + +F G++Q DA EFL Y+L L+ E +
Sbjct: 293 LRKVLLNLSQGGDGSKSAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTELQQ 352
Query: 112 V--PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
V P + G + K + L + + S+ +++F G L+S VRC C
Sbjct: 353 VSFPVELGGP--KSGEHKNPYNVSGLSHLQA--KGRNSIVTNVFGGVLQSEVRCLICGME 408
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
S ++ F +LSL +P Y + + T + PV +
Sbjct: 409 SKKHDPFLDLSLDIPEK----YYSKEHGA--------DGTNGADGGGGAAPV----CHIS 452
Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVT 283
+CL+ F E L T C CK + K + I+RLP VL L KRF N + K+
Sbjct: 453 DCLSSFTEVEELAETELYYCNSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYRTKID 512
Query: 284 SPIKFPREGLDMEYYISASG----RRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
I FP LDM ++ +G R S YDL AV H G + GHYT++ G
Sbjct: 513 LRIAFPINALDMSQFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYTSFAINNGV 572
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
W ++D V V + V AE YIL Y +R
Sbjct: 573 --WMHFNDHTVKEVSSTAV----AECKPYILFYIKR 602
>gi|301626604|ref|XP_002942482.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Xenopus
(Silurana) tropicalis]
Length = 343
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 141/338 (41%), Gaps = 64/338 (18%)
Query: 51 LVDALVNFMKMMWSSGNLVLNTKAILLAL-RSYTKKFDGNQQQDAQEFLLYLL----AAL 105
L+ + + +WS A L A+ + Y F G QQDAQEFL + + +
Sbjct: 47 LMATFADVIASLWSPDPPDAANPARLKAVFQKYVPSFTGYSQQDAQEFLKFFMDRIHVEI 106
Query: 106 NEEAKVVPDQYNGSTYSNTSSKQ---VGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVR 162
N + + P + + Q RA W+++ E S D+FVGQL+
Sbjct: 107 NRKGRKTPSILSDAKRPAALEHQDSLSDDERANQMWKRYLEREDSKIVDLFVGQLK---- 162
Query: 163 CSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP 222
S ++C C S +E+F +LSLP+P
Sbjct: 163 ----------------------------------SCLKCQACGYRSPTFEVFCDLSLPIP 188
Query: 223 PGGGTLYECLNKFFNGE-----TLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN 277
+ + E + C C++++ K IQR P +L+L RFS+
Sbjct: 189 KVPTAVTGFTGALWPPEGSAVIAHRSICDRCRQRTRSTKKLTIQRFPRILVLHLNRFSTT 248
Query: 278 --FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCR 335
+K + + FP L ++ + S TY+L A+ NH G + YGHYTAYCR
Sbjct: 249 RFSIKKCSVSVDFPLHRLHLKEFASEKS----GNPTYNLYALCNHSG-SVHYGHYTAYCR 303
Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
+ + WY Y+D+ VSP++ V+S E Y+L Y+
Sbjct: 304 TQSS--WYAYNDSRVSPINESQVQSNE----GYVLFYE 335
>gi|156547946|ref|XP_001604800.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 1
[Nasonia vitripennis]
Length = 881
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 161/376 (42%), Gaps = 79/376 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ------LVDALVNFMK 60
G+ N GNTCY+NS LQ L + PA N LL++ H +SK + L A+ ++
Sbjct: 126 GMYNVGNTCYLNSTLQALFHVPALVNWLLSD---AHHESKCEQNDGAGECLTCAVSKTLQ 182
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ + L+ + QQ+DA EFL YLL + +
Sbjct: 183 FSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEK------------- 229
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
++ A H K S K T+ + +IF
Sbjct: 230 ----------AYLARHKALKLD---------------------SYSKETTPINQIF---- 254
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
GG + R+ V+C CK ST ++ F +L L + GTL E L +F+ E
Sbjct: 255 ------GGYI-----RTEVKCLQCKHVSTTFQHFQDLLLDIRK-AGTLDEALAGYFSQEH 302
Query: 241 LHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +DM
Sbjct: 303 LDNNDYKCEACKRRVPATKQFILERPPKVLCVQLKRFSV-LGGKISRHIGF-KQTVDMGP 360
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
Y+ S+ Y L ++ H+G + GHYTA + +G++Y +DD+ V P+
Sbjct: 361 YVRRQPGEQPSKLIYRLASMVTHMGPSVNCGHYTAIA-QVSSGKFYSFDDSSVRPISLNN 419
Query: 358 VESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 420 VVST----NAYIMIFE 431
>gi|301606838|ref|XP_002933022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49-like [Xenopus
(Silurana) tropicalis]
Length = 686
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 162/442 (36%), Gaps = 114/442 (25%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--------------------- 39
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D
Sbjct: 251 VTPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDPSEKEELLARTGTNGKRRVGDA 310
Query: 40 -------------------------PIHPDSKSQGQLVDALVNFMKMMWSSGNLVLNTKA 74
P P +K L L ++MWS +++ A
Sbjct: 311 GGGHPVGGIGLNGGSSITKSLELIQPKEPSTKHLS-LCHELHTLFRVMWSGKWALVSPFA 369
Query: 75 ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRA 134
+L ++ S F G QQDAQEFL LL + +E + GS R
Sbjct: 370 MLHSVWSLIPAFRGYDQQDAQEFLCELLDKVQQELE-----------------SEGSKRR 412
Query: 135 LHY---WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 191
+ K V + IF GQL S V C C S E FW+LSL P Y
Sbjct: 413 ILIPISQRKLTKQVLKVVNTIFHGQLLSQVTCLKCSYKSDTVEPFWDLSLEFP----ERY 468
Query: 192 ECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN---TCQYC 248
Q + PV TL E L KF E L C C
Sbjct: 469 HSQEKGIA--------------------PVTTTECTLTEMLAKFTETEALEGRIYACDQC 508
Query: 249 KKQ-----------SDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLD 294
+ S+ K I RLP VL L KRF N +K+ + F + L+
Sbjct: 509 NSKRRKSSPKPLVLSEAKKQLMIFRLPQVLRLHLKRFRWSGRNHREKIGVHVFFD-QVLN 567
Query: 295 MEYYI-SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
ME Y S Y YDL AV H GK GHYTAYC G W +D+ ++
Sbjct: 568 MEPYCRSVLPPSNPEAYLYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNMC 627
Query: 354 DAQTVESAEAEHGAYILVYQRR 375
+ V + AYIL Y +R
Sbjct: 628 SVEEVCRTQ----AYILFYTQR 645
>gi|393233831|gb|EJD41399.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 544
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 156/398 (39%), Gaps = 98/398 (24%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM-- 61
G G+ N GNTCY+N +LQ N P RN L + +SK+ + K+
Sbjct: 172 GRRGLLNLGNTCYLNCILQTFLNNPLLRNYYLAD----RHNSKACDRAACVSCELDKLFA 227
Query: 62 -MWSSGNLV--LNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
++S L +L + +K G Q DA E L+ LL AL+ + G
Sbjct: 228 EVYSGAQFAQPLGPTTMLHSTWLLSKDVSGYAQHDAHECLITLLNALHAHTR-------G 280
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
ST T+ V IF GQL+S VRC+ C S + +
Sbjct: 281 ST---------------------STSCNCVVHTIFAGQLQSEVRCARCSSHSRTLDPMLD 319
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
LSL + G PPG TL CL ++
Sbjct: 320 LSLSLARDG---------------------------------TPPGQALTLEGCLKRYTR 346
Query: 238 GETLH-NTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN------FTQKVTSPIKFPR 290
E L C C+ ++ K I+RLPPVL + KRF QK+ + ++FP
Sbjct: 347 TERLDARDCPDCRHTAEATKRLSIRRLPPVLCVQLKRFEHKGADKGAAPQKIDAHVRFP- 405
Query: 291 EGLDMEYYIS------------ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREG 338
++M Y+S A S Y YDL AV H G+ GHYT + R +
Sbjct: 406 AAINMLPYVSPKTGAKGAPGSGAVDTGPPSMYDYDLFAVVCHEGQID-NGHYTCFARSQ- 463
Query: 339 TGRWYLYDDTVVSPVDAQTVESAEAEHG-AYILVYQRR 375
WY YDD V+ T+ A + HG AY+L Y +R
Sbjct: 464 -DEWYRYDDDKVT---HATLRDALSPHGHAYMLCYVKR 497
>gi|47210494|emb|CAF91634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 45/255 (17%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
S+ SD+F G + SSV+C C R S E F ++SLP+P G +L SS ++ +
Sbjct: 429 SIVSDVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIP---GKEDLAKLHSSTHQTSLVK 485
Query: 207 TSTVYEIFWELSLPVPPGGGTLY----------------------ECLNK---FFNGETL 241
+ + + P G + E LN F G+ +
Sbjct: 486 AGSCGDAY-------APQGWIAFVMEYIKRYLKKSILVSEPWMFTETLNISIFFILGDNM 538
Query: 242 HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
+ +C+ CKK + VK ++Q LP +L + KRF F+ K+++ + FP EGLD++ ++
Sbjct: 539 Y-SCEKCKKLRNGVKFCKMQNLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 597
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ + YDL +V H G TA GHY AYCR +G WY +DD V+ V V+
Sbjct: 598 AKDSSCQTT--NYDLLSVICHHG-TASSGHYIAYCRNDGNNLWYEFDDHRVTEVSESCVQ 654
Query: 360 SAEAEHGAYILVYQR 374
+AE AY+L Y++
Sbjct: 655 NAE----AYVLFYKK 665
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKM 61
S GL G+ N GNTCY+N+ LQ LSN P L + D K L + +
Sbjct: 133 SRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGMVRTDKKP--ALCKSYQKLVSD 190
Query: 62 MW--SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+W +S + V+ T + +++ F G QQD+QEFL L+ L+EE K
Sbjct: 191 LWHKNSSSYVVPT-TLFQGIKTINPMFRGYSQQDSQEFLRCLMDQLHEELK 240
>gi|145340661|ref|XP_001415439.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575662|gb|ABO93731.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 129/320 (40%), Gaps = 82/320 (25%)
Query: 86 FDGNQQQDAQEFLLYLLAALNEE---AKVVPDQYNG--STYSNTSSKQVGSFRALHYWEK 140
F GN+QQDA EF+ +LL L +E K Q NG S TS K
Sbjct: 44 FAGNEQQDAHEFMRFLLDRLRKELSSGKHAGSQTNGLKGGLSPTSPK------------- 90
Query: 141 FQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVR 200
T + D V + EIF +++ ++V
Sbjct: 91 --TPQGKCEQDDGV-------------TGDKIMEIFGGVAV---------------TTVT 120
Query: 201 CSNCKRTSTVYEIFWELSLPVPP---------------GGGTLYECLNKFFNGETLHNT- 244
C C+R+S E F +LSLP+PP G TL +CL F ETL
Sbjct: 121 CMKCERSSERREPFMDLSLPIPPVVGKNGSIEEGEGPNGEATLQQCLAAFVRNETLSGHG 180
Query: 245 ---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS---SNFTQKVTSPIKFPREGLDMEYY 298
C C K K I +LPPVL L KRF+ K+T + FP + LD+ Y
Sbjct: 181 RYFCDGCGKVQSATKSTRIAKLPPVLCLHLKRFTWKGHAMRTKLTHDVDFPLDDLDLAPY 240
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRR---EGTGRWYLYDDTVVSPVDA 355
+G + YDL AV H G A GHYTA R EG W ++D V+ + A
Sbjct: 241 CETNGEAM-----YDLVAVVTHHGLNAGSGHYTACAREFTAEGNSDWQHFNDDDVNSLTA 295
Query: 356 QTVESAEAEHGAYILVYQRR 375
+ V + + YI +Y R+
Sbjct: 296 EEVRTGQ----GYIFLYARK 311
>gi|328777507|ref|XP_001120426.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
mellifera]
Length = 884
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 159/376 (42%), Gaps = 79/376 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ------LVDALVNFMK 60
G+ N GNTCY+NS LQ L + PA N LL++ H SK + L A+ ++
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDS---HHTSKCEQNDGGGECLTCAVAKTLQ 181
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ I L+ + QQ+DA EFL YLL + +
Sbjct: 182 FSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEK------------- 228
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
++ A H K S K T+ + +IF
Sbjct: 229 ----------AYLARHKASKLD---------------------SYSKETTPINQIF---- 253
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
GG +R+ V+C C+ ST ++ F +L + + TL E L+ +F+ E
Sbjct: 254 ------GG-----YIRTEVKCLQCRHVSTTFQHFQDLLVDIRKAS-TLDEALSSYFSREQ 301
Query: 241 LHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +DM
Sbjct: 302 LDNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSV-LGGKISKHIGF-KQTIDMGP 359
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
Y+ TY L ++ H+G + GHYTA + TG++Y +DD+ V P+
Sbjct: 360 YLWKEPGESSQSLTYKLMSIVTHMGPSVNCGHYTAVA-KVSTGQYYSFDDSCVRPLSLSN 418
Query: 358 VESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 419 VLSTN----AYIMIFE 430
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 163/382 (42%), Gaps = 63/382 (16%)
Query: 17 INSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ----LVDALVNFMK 60
+N++LQ LSN F RN H ++SQG LV+ +
Sbjct: 1 MNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVSLVEEFRKTLC 58
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+W + +++ + F G QQQDA EF+ YLL L+ E + +NG +
Sbjct: 59 ALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE---LQGGFNGVS 115
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
S + L K AS V + IF G L++ V C C S ++ F +L
Sbjct: 116 RSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDL 171
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SL +P Q RS R N + + + +CL F + E
Sbjct: 172 SLDIPS--------QFRSK-RSKNQENGPVCW----------------VRDCLRSFTDLE 206
Query: 240 TLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGL 293
L T C CKK+ K + IQ+LP VL L KRF ++ KV + ++FP GL
Sbjct: 207 ELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGL 266
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
DM+ Y+ YDL AV H G GHYTAY E GRW+ ++D+ V+
Sbjct: 267 DMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHFNDSTVTLT 324
Query: 354 DAQTVESAEAEHGAYILVYQRR 375
D +TV A+ AYIL Y R
Sbjct: 325 DEETVVKAK----AYILFYVER 342
>gi|380012929|ref|XP_003690525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
florea]
Length = 884
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 159/376 (42%), Gaps = 79/376 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ------LVDALVNFMK 60
G+ N GNTCY+NS LQ L + PA N LL++ H SK + L A+ ++
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDS---HHTSKCEQNDGGGECLTCAVAKTLQ 181
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ I L+ + QQ+DA EFL YLL + +
Sbjct: 182 FSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEK------------- 228
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
++ A H K S K T+ + +IF
Sbjct: 229 ----------AYLARHKASKLD---------------------SYSKETTPINQIF---- 253
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
GG +R+ V+C C+ ST ++ F +L + + TL E L+ +F+ E
Sbjct: 254 ------GG-----YIRTEVKCLQCRHVSTTFQHFQDLLVDIRKAS-TLDEALSSYFSREQ 301
Query: 241 LHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +DM
Sbjct: 302 LDNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSV-LGGKISKHIGF-KQTIDMGP 359
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
Y+ TY L ++ H+G + GHYTA + TG++Y +DD+ V P+
Sbjct: 360 YLWKEPGEPSQSLTYKLMSIVTHMGPSVNCGHYTAVA-KVSTGQYYSFDDSCVRPLSLSN 418
Query: 358 VESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 419 VLSTN----AYIMIFE 430
>gi|405960113|gb|EKC26060.1| Ubiquitin carboxyl-terminal hydrolase 15 [Crassostrea gigas]
Length = 923
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLV 52
++PGL G++N GNTC++NS +QC+SN P N LL NED P+ G++
Sbjct: 249 VAPGLCGLSNLGNTCFMNSAIQCMSNVPKLTNYLLGDRWKEEINEDNPLG----MGGEIA 304
Query: 53 DALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KV 111
+ +K MWS + + + + +F G QQQD+QE L +LL L+E+ ++
Sbjct: 305 RSYTELIKTMWSGKYSYTVPRYFKVQVGKFAPQFSGYQQQDSQELLAFLLDGLHEDLNRI 364
Query: 112 VPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
Y SN S Q A WE ++ SV D F G L+S+V C C + S
Sbjct: 365 KKKPYVEIQDSNNRSDQE---VAKESWENYEKRNDSVIVDTFHGLLKSTVNCPECTKVSV 421
Query: 172 VYEIFWELSLPVPPGGGTLYE 192
++ F LSLP+P L E
Sbjct: 422 TFDPFCYLSLPMPIKKERLLE 442
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
L CL F E L C CKK K +++ LP VLI+ KRFS N + K
Sbjct: 751 LDNCLELFTKSEQLGENDLWYCPQCKKHQPATKKFDLWSLPDVLIVHLKRFSYNRFYRDK 810
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + ++FP GL+++ YI TYDL AVSNH G GHYTAY + + G
Sbjct: 811 IDALVEFPARGLNLKKYIINPHH---GPVTYDLIAVSNHYGGLGG-GHYTAYAKNKDDGE 866
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
WY +DD+ V+ V S AY+LVYQ++
Sbjct: 867 WYYFDDSSVTSSSEDDVVSK----AAYVLVYQKQ 896
>gi|401625993|gb|EJS43962.1| ubp5p [Saccharomyces arboricola H-6]
Length = 807
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 166/408 (40%), Gaps = 91/408 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN CY+N +LQCL+ T + L+ I + S+G L N + M
Sbjct: 449 GLENMGNCCYMNCILQCLAGTHDLARMFLDNTYSNFINFNNTRGSKGLLAKNFANLVHNM 508
Query: 63 WSSGNL-VLNTKAILLALRSYTK-------KFDGNQQQDAQEFLLYLLAALNEEAKVVPD 114
G LN++ + + K + + QQD QEF +LL L+E+ +
Sbjct: 509 HKHGAFKPLNSRITPVQTIQFKKICGHINFMYSDSMQQDCQEFCQFLLDGLHEDL----N 564
Query: 115 QYNGSTYSNTSSKQVGSFR---------ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSN 165
Q G + S++ R AL WE+F T+ S D+F GQ S ++C
Sbjct: 565 QNGGKKHLKELSEEEERVRENMSIRKASALE-WERFLLTDFSAIIDLFQGQYASRLQCQA 623
Query: 166 CKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG 225
C TST Y+ F LS+PVP R C
Sbjct: 624 CAHTSTTYQTFSVLSVPVP---------------RIRTC--------------------- 647
Query: 226 GTLYECLNKFFNGETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQK 281
T+ +C +F E L +C C K+ K +I RLP LI+ KRF N K
Sbjct: 648 -TILDCFREFTKCEKLGIDEQWSCSKCLKKQPSSKQLKITRLPKKLIINLKRF-DNQMNK 705
Query: 282 VTSPIKFPREGLDMEYY--------------ISASGRRVESRYTYDLCAVSNHIGKTALY 327
+++P LD+ Y I A G+ RY L V+ H G +LY
Sbjct: 706 NNVFVQYPC-FLDLTPYWARDFNHESIVNEDIPARGQIPPFRYR--LYGVACHSG--SLY 760
Query: 328 -GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
GHYT+Y + W+ +DD++ P+ ++ AY+L Y+R
Sbjct: 761 GGHYTSYVYKGPHKGWFFFDDSIYRPI---RFDNEFVTPNAYVLFYER 805
>gi|440799459|gb|ELR20504.1| ubiquitin specific protease 44 isoform 2, putative [Acanthamoeba
castellanii str. Neff]
Length = 549
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 140/336 (41%), Gaps = 57/336 (16%)
Query: 44 DSKSQGQLVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLA 103
D S + + N +++WS V+ A+L AL + +F QQQDAQEFL+YLL
Sbjct: 79 DGPSLSSISAEIHNIFRVVWSGRWAVVTPFALLDALWKFVPRFRNYQQQDAQEFLVYLLD 138
Query: 104 ALNEEAKVVPDQYNGS---TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSS 160
L++E + NG S + K+ G S+ S F G+L S
Sbjct: 139 KLHDELTSL----NGGREVVASPSGQKRQGE---------------SIISKTFNGELLSQ 179
Query: 161 VRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLP 220
V CS C S+ E + +L L +P Q R + R + V
Sbjct: 180 VTCSACGNVSSRREPYLDLLLDIP--------IQHAGGSRSTRGNRKTNVPSC------- 224
Query: 221 VPPGGGTLYECLNKFFNGETLHN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT 279
+LY+CL+ F E L C+ CK D K IQ LP +++
Sbjct: 225 ------SLYDCLDSFTWPEKLTGYYCEKCKSNQDASKRLAIQTLPDRFC-----WTTTSR 273
Query: 280 QKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
KV + + FP GLD+ + S +DL +V H G GHYTA+C
Sbjct: 274 AKVDTKVLFPLIGLDLSAFCSEE----RENAIFDLSSVVIHHGSGPSAGHYTAFCYHTEQ 329
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
G W ++D VS Q SA+ AY+L YQRR
Sbjct: 330 GTWLHFNDCRVSVSSPQEAASAQ----AYMLFYQRR 361
>gi|198466407|ref|XP_001353988.2| GA18001 [Drosophila pseudoobscura pseudoobscura]
gi|198150586|gb|EAL29724.2| GA18001 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 162/381 (42%), Gaps = 58/381 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMM 62
GL G+ N G TC++N ++Q L +TP + +++ H KS + LV + +
Sbjct: 156 GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDR---HDCGKSSHKCLVCEVSRLFQEF 212
Query: 63 WSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYS 122
+S L+ +L + ++ K G +QQDA EF + L L+ ++ + S
Sbjct: 213 YSGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNS 272
Query: 123 NTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
++S S + + IF G L+S V C CK ST ++ FW++SL
Sbjct: 273 SSSGSGTNSTSSS---TSSYGQCNCIIDQIFTGMLQSDVVCQACKGVSTTFDPFWDISL- 328
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFNGE 239
+L GG TL +CL ++ E
Sbjct: 329 ---------------------------------DLGETTTHGGVTPKTLIDCLERYTRAE 355
Query: 240 TLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGL 293
L + C CK + K + ++ LP V+ KRF S+ +K++S I+FP E
Sbjct: 356 HLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVE-F 414
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
DM ++S + + + L AV NH+G T GHYTAY R + W DD V++
Sbjct: 415 DMTPFMSEK-KNAYGDFRFSLYAVVNHVG-TIDTGHYTAYVRHQ-KDTWVKCDDHVITMA 471
Query: 354 DAQTVESAEAEHGAYILVYQR 374
+ V +E Y+L Y +
Sbjct: 472 SLKQVLDSE----GYLLFYHK 488
>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
thioesterase DUB-1; AltName:
Full=Ubiquitin-specific-processing protease DUB-1
gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
Length = 526
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 155/372 (41%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S +L ++ALV
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKLCAMEALVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSHIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H K + ++S DIF G RS ++C C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSKPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + +V + W+ G Y
Sbjct: 198 LDI---------------------SSAQSVKQALWDTEKSEELCGDNAY----------- 225
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
C C+++ K + P VL++ RFS+ K+ + +P E LD++ Y+S
Sbjct: 226 ---YCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
Y L AV H G T+ GHY C + G G+WY DDT V+ D +V
Sbjct: 282 EP---TGGPLPYALYAVLVHDGATSHSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|195999732|ref|XP_002109734.1| hypothetical protein TRIADDRAFT_52906 [Trichoplax adhaerens]
gi|190587858|gb|EDV27900.1| hypothetical protein TRIADDRAFT_52906 [Trichoplax adhaerens]
Length = 488
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 165/385 (42%), Gaps = 75/385 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+AN GNTC++NS++Q L +TP R+ L++ D+ + + L + + +
Sbjct: 159 GLKGLANLGNTCFMNSIVQALVHTPILRDYFLSDKHQCSHDNNNTC-IACELASIFQKFY 217
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S G+L +L + + + G QQDA EFL+ +L AL+ K
Sbjct: 218 SVGSLPHIPNKLLYLIWTNARHMAGYVQQDAHEFLIAILNALHGHFK------------- 264
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+++ S + E + IF G ++S V C C TST + F+++S+ +
Sbjct: 265 ---RELSS----SFNEIIDNNCRCIVHQIFAGNMQSDVTCQKCGNTSTTIDPFFDISMDI 317
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
G C L S+ STVYE S+ TL CL++F + ETL +
Sbjct: 318 --GSLENERCDLSSA---------STVYETGANSSV-------TLLNCLDRFTHAETLDH 359
Query: 244 TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISA-- 301
C + +E R S F +K+T+ + F + LDM+ Y+S
Sbjct: 360 AKLKCH------RCHEYSRF---------EHSKKFGRKITTYVAFS-DILDMKPYVSKLR 403
Query: 302 ------------SGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
+ + S Y L AV NH G T GHYT Y R+ +W+ DD
Sbjct: 404 INNGESGHADNQNAKSCSSSVRYCLFAVINHSG-TLDSGHYTCYV-RQPYNQWFECDDAK 461
Query: 350 VSPVDAQTVESAEAEHGAYILVYQR 374
+ + V S+E Y+L Y R
Sbjct: 462 IRKATTKDVLSSE----GYLLFYHR 482
>gi|354485985|ref|XP_003505162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like, partial
[Cricetulus griseus]
Length = 541
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 172/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 179 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 233
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 234 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 289
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 290 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 331
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 332 ISLDLPGSCTSFWP---MSPGRESSMNGESHI------------PGITTLTDCLRRFTRP 376
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 377 EHLGSSAKIKCSSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 435
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S R+ + Y L A NH G T GHYT++ R
Sbjct: 436 LDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAGVNHQG-TLESGHYTSFIRHH-RD 493
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V+ + V ++E Y+L Y ++
Sbjct: 494 QWFKCDDAVIIKASIKDVLNSE----GYLLFYHKQ 524
>gi|444525392|gb|ELV13999.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Tupaia
chinensis]
Length = 479
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 164/390 (42%), Gaps = 74/390 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV M ++
Sbjct: 141 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSS-----CLVCEMSSLF 195
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 196 ---------QELLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 243
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 244 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 285
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + G TL +CL +F E L +
Sbjct: 286 PGSSTPFWPLSPGSEGSVVNGESHVA--------------GTTTLTDCLRRFTRPEHLGS 331
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 332 SAKIKCSGWASYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 390
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
++++S R+ +Y Y L AV NH G T GHYT++ R+ +W+
Sbjct: 391 FMASSKESRMNGQYQQPTDSLNSDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 448
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + V +E Y+L Y ++
Sbjct: 449 DDAIITKASIKDVLDSE----GYLLFYHKQ 474
>gi|344249976|gb|EGW06080.1| Ubiquitin carboxyl-terminal hydrolase 27 [Cricetulus griseus]
Length = 438
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 172/395 (43%), Gaps = 72/395 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + +
Sbjct: 76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 130
Query: 60 KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+ ++S GN + LL L + + G +QQDA EFL+ L L+ K G
Sbjct: 131 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 186
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
SN + + IF G L+S V C C ST + W+
Sbjct: 187 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 228
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL +P + + S R S+ S + PG TL +CL +F
Sbjct: 229 ISLDLPGSCTSFWP---MSPGRESSMNGESHI------------PGITTLTDCLRRFTRP 273
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
E L ++ C C+ + K +++LP V FKRF + Q K+T+ I FP E
Sbjct: 274 EHLGSSAKIKCSSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 332
Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
LDM ++++S R+ + Y L A NH G T GHYT++ R
Sbjct: 333 LDMTPFMASSKETRMNGQLQLPTNSGNNENKYSLFAGVNHQG-TLESGHYTSFIRHH-RD 390
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+W+ DD V+ + V ++E Y+L Y ++
Sbjct: 391 QWFKCDDAVIIKASIKDVLNSE----GYLLFYHKQ 421
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 153/339 (45%), Gaps = 49/339 (14%)
Query: 45 SKSQGQ----LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLY 100
++SQG LV+ + +W + +++ + F G QQQDA EF+ Y
Sbjct: 189 TRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRY 248
Query: 101 LLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRS 159
LL L+ E + +NG + S + L K AS V + IF G L++
Sbjct: 249 LLDHLHLE---LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQN 301
Query: 160 SVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSL 219
V C C S ++ F +LSL +P Q RS KR+ + +
Sbjct: 302 EVNCLICGTESRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENG 340
Query: 220 PVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF- 274
PV +L +CL F + E L T C CKK+ K + IQ+LP VL L KRF
Sbjct: 341 PV----CSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFH 396
Query: 275 -SSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAY 333
++ KV + ++FP GLDM+ Y+ YDL AV H G GHYTAY
Sbjct: 397 WTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAY 456
Query: 334 CRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
E GRW+ ++D+ V+ D +TV A+ AYIL Y
Sbjct: 457 ATHE--GRWFHFNDSTVTLTDEETVVKAK----AYILFY 489
>gi|195029733|ref|XP_001987726.1| GH19806 [Drosophila grimshawi]
gi|193903726|gb|EDW02593.1| GH19806 [Drosophila grimshawi]
Length = 920
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 21/242 (8%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS--LPVPPGGGTLYE-----CQLRSSV 199
S+ SD+F G+L SSV+C C R ST E F +LS +P L++ Q ++
Sbjct: 252 SIISDVFDGKLLSSVQCLTCDRISTREETFQDLSLPIPTRDFLNVLHQTHSLSVQSLNAA 311
Query: 200 RCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETLHN----TCQYCKKQSDL 254
++ + W + G TLY+C+ FF+ + L +C+ C K
Sbjct: 312 DLASARSNEGWLAWMWNMVRSWIFGPSVTLYDCMASFFSADELKGDNMYSCERCNKLRTG 371
Query: 255 VKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTY 312
+K + LP VL + KRF + ++ K++S + FP EG DM Y + + TY
Sbjct: 372 IKYSRVLNLPEVLCIHLKRFRHDLSYSSKISSHVYFPLEGFDMRPYQHKECKSLVP--TY 429
Query: 313 DLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
+LC+V H G T GHYT Y R GRWY +DD V+ V V++ + AY+L Y
Sbjct: 430 NLCSVICHHG-TVGGGHYTCYARNTLNGRWYEFDDQHVTEVTPDVVQNCQ----AYVLFY 484
Query: 373 QR 374
Q+
Sbjct: 485 QK 486
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN-----EDIPIHPDSKSQGQLVDALVNF 58
GL G+ N NTCY+NS LQ LSN + +N E I P SK G L +
Sbjct: 34 GLVGLQNIANTCYMNSALQALSNLSPVTHYFINCSDLVEHIASTPRSKP-GGLAKSYQRL 92
Query: 59 MKMMW---SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
M+ MW L + IL +RS F G QQ D QEFL + L+EE
Sbjct: 93 MQEMWLQVDEPKDYLAPRGILYGIRSVHPMFRGYQQHDTQEFLRCFMDQLHEE 145
>gi|50510751|dbj|BAD32361.1| mKIAA1003 protein [Mus musculus]
Length = 961
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SD+F G + S V+C C R ST E F +LSLP+P PG
Sbjct: 490 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 549
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 550 CGDSYSSQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 602
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ LP +L + KRF ++ KV+S + FP EGLD+ +
Sbjct: 603 NMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPF 662
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 663 LAKEC--TSQVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 719
Query: 359 ESAEAEHGAYILVYQR 374
++ E AY+L Y++
Sbjct: 720 QNVE----AYVLFYRK 731
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 188 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISEVW 245
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 246 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 293
>gi|23208620|gb|AAN15803.1|AF449715_1 pVHL-interacting deubiquitinating enzyme 2 [Mus musculus]
Length = 916
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SD+F G + S V+C C R ST E F +LSLP+P PG
Sbjct: 445 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 504
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 505 CGDSYSSQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 557
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ LP +L + KRF ++ KV+S + FP EGLD+ +
Sbjct: 558 NMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPF 617
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 618 LAKEC--TSQVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 674
Query: 359 ESAEAEHGAYILVYQR 374
++ E AY+L Y++
Sbjct: 675 QNVE----AYVLFYRK 686
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|403160479|ref|XP_003320979.2| hypothetical protein PGTG_02021 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170264|gb|EFP76560.2| hypothetical protein PGTG_02021 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1235
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 151/359 (42%), Gaps = 88/359 (24%)
Query: 47 SQGQLVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALN 106
+QG L +++ ++++W + ++ A+ + KF G+ QQDAQ + N
Sbjct: 934 TQGLLAESVAELVRVLWGAQYTFVSPITFKDAICRFAPKFRGSDQQDAQ-------GSPN 986
Query: 107 EEA--KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
+ ++ P++ T Q+ S + WE ++ + SV ++F GQ
Sbjct: 987 KPPPLEMTPER---EAALETLPTQIASAKE---WEIYKRRDNSVIVELFQGQY------- 1033
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
RS ++C C TST Y F LSLP+P
Sbjct: 1034 -------------------------------RSRLQCLTCNTTSTTYNTFMYLSLPIPNK 1062
Query: 225 GG----TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS- 275
G +L +CL+ F E + C CK + K + +LPP+L++ KRFS
Sbjct: 1063 RGISKVSLTQCLDAFLKEEIMEKDDAWNCPKCKTRRKATKRLSLAKLPPILLIHLKRFSF 1122
Query: 276 -SNFTQKVTSPIKFPREGLDMEYYISA------------------SGRRVESRYTYDLCA 316
F+ K+ + +++P GLD+ Y+ + R YDL A
Sbjct: 1123 KGPFSDKLETFVQYPLYGLDLSSYVPPPLSPAALSNELKPVYEDVATRSSPESNIYDLYA 1182
Query: 317 VSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
V NH G + GHYTA+ R + WY D+ VS D ++V++ AY+L ++RR
Sbjct: 1183 VCNHFGSLS-SGHYTAFARSQKD--WYNIGDSRVSKTDEKSVKA----RSAYLLCFRRR 1234
>gi|157821617|ref|NP_001101297.1| ubiquitin carboxyl-terminal hydrolase 20 [Rattus norvegicus]
gi|149039064|gb|EDL93284.1| ubiquitin specific protease 20 (predicted) [Rattus norvegicus]
Length = 915
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SD+F G + S V+C C R ST E F +LSLP+P PG
Sbjct: 444 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 503
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 504 CGDSYSSQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 556
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ LP +L + KRF ++ KV+S + FP EGLD+ +
Sbjct: 557 NMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPF 616
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 617 LAKEC--TSQVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 673
Query: 359 ESAEAEHGAYILVYQR 374
++ E AY+L Y++
Sbjct: 674 QNVE----AYVLFYRK 685
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|354505004|ref|XP_003514562.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus
griseus]
gi|344258150|gb|EGW14254.1| Ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus griseus]
Length = 915
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SD+F G + S V+C C R ST E F +LSLP+P PG
Sbjct: 444 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 503
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 504 CGDSYSSQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 556
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ LP +L + KRF ++ KV+S + FP EGLD+ +
Sbjct: 557 NMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPF 616
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 617 LAKEC--TSQVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 673
Query: 359 ESAEAEHGAYILVYQR 374
++ E AY+L Y++
Sbjct: 674 QNVE----AYVLFYRK 685
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|355704804|gb|EHH30729.1| hypothetical protein EGK_20499, partial [Macaca mulatta]
gi|355757363|gb|EHH60888.1| hypothetical protein EGM_18779, partial [Macaca fascicularis]
Length = 331
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 162/386 (41%), Gaps = 81/386 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GNTC++N ++Q L++TP R+ L++ ++P + LV + + + +
Sbjct: 1 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLFREL 55
Query: 63 WSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNGS 119
+ SGN + LL L + + G +QQDA EFL+ L L+ K V N
Sbjct: 56 Y-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNP 114
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ N + IF G L+S V C C ST + W++
Sbjct: 115 NHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDI 151
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSL---PVPPGGGTLYECLNKFF 236
SL +P WE S+ PG TL +CL +F
Sbjct: 152 SLDLPGS----------------------------WESSVNGESHIPGITTLTDCLRRFT 183
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
E L ++ C C+ + K + +LP V FKRF + Q K+T+ I FP
Sbjct: 184 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 243
Query: 291 EGLDMEYYI-SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
E LDM ++ S + Y L AV NH G T GHYT++ R +W+ DD V
Sbjct: 244 E-LDMTPFMASMPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIRHH-KDQWFKCDDAV 300
Query: 350 VSPVDAQTVESAEAEHGAYILVYQRR 375
++ + V +E Y+L Y ++
Sbjct: 301 ITKASIKDVLDSE----GYLLFYHKQ 322
>gi|30794162|ref|NP_083122.1| ubiquitin carboxyl-terminal hydrolase 20 [Mus musculus]
gi|81876818|sp|Q8C6M1.1|UBP20_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2
gi|26344117|dbj|BAC35715.1| unnamed protein product [Mus musculus]
gi|50927529|gb|AAH79674.1| Ubiquitin specific peptidase 20 [Mus musculus]
gi|74201201|dbj|BAE37447.1| unnamed protein product [Mus musculus]
gi|148676553|gb|EDL08500.1| ubiquitin specific peptidase 20 [Mus musculus]
Length = 916
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
SV SD+F G + S V+C C R ST E F +LSLP+P PG
Sbjct: 445 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 504
Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
G Y Q + +R S FW PV TL +CL FF + L
Sbjct: 505 CGDSYSSQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 557
Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
+C+ CKK + VK ++ LP +L + KRF ++ KV+S + FP EGLD+ +
Sbjct: 558 NMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPF 617
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
++ TYDL +V H G TA GHY AYC+ G+WY +DD V+ V V
Sbjct: 618 LAKEC--TSQVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 674
Query: 359 ESAEAEHGAYILVYQR 374
++ E AY+L Y++
Sbjct: 675 QNVE----AYVLFYRK 686
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISEVW 200
Query: 64 SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
+ V+ T ++ ++ F G QQD QEFL L+ L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248
>gi|47218339|emb|CAG04171.1| unnamed protein product [Tetraodon nigroviridis]
Length = 688
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 173/449 (38%), Gaps = 106/449 (23%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP-------------------- 40
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D+
Sbjct: 267 VTPGVTGLRNLGNTCYMNSILQVLSHLHVFRECFLRLDLTQAVELLASAVHGQMVGKLSS 326
Query: 41 --------------------------------IHPDSKSQGQ--LVDALVNFMKMMWSSG 66
I P S L L ++MWS
Sbjct: 327 PSSLTPRKGLQASSGSGSGLSGGASRSRSMELIQPKEPSSKHISLCHELHTLFQVMWSGK 386
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+++ A+L ++ F G QQDAQEFL LL + E + +T +
Sbjct: 387 WALVSPFAMLHSVWQLIPAFRGYAQQDAQEFLCELLDKVQHELESAGKHTTSTTGVPQTR 446
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
K++ R + SV + IF GQL S V C C S E FW+LSL P
Sbjct: 447 KRL--IRQV----------LSVVNTIFHGQLLSQVTCLACGHRSDTVEPFWDLSLEFP-- 492
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQ 246
Y R S ++C T + + +L G++Y C N T +
Sbjct: 493 --ERYHSNSRESAAQASCHLTEMLAKFTETEALE-----GSIYAC--DHCNASRRRTTAK 543
Query: 247 ---YCKKQSDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLDMEYYI- 299
+ Q L+ + +LP VL L KRF N +K+ ++F + L+ME Y
Sbjct: 544 PVLLTEAQKQLM----VHKLPQVLRLHLKRFRWSGRNHREKIGVHVRFD-QLLNMEPYCC 598
Query: 300 -SASGRRV------------ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+S R + + YDL AV H GK GHYT+YC G W +
Sbjct: 599 RESSPRDLSCSSPSAASPPHHKHFLYDLSAVVMHHGKGFGSGHYTSYCYNTEGGFWVHCN 658
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D+ ++ + V A+ AYIL Y +R
Sbjct: 659 DSKLNVCSEEEVCRAQ----AYILFYTQR 683
>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
Length = 545
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + + ++S DIF G RS ++C +C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSEPTSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + +V + W+ ++ GE
Sbjct: 198 LDI---------------------SSAQSVNQALWDTE-------------KSEELRGEN 223
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
+ C C+++ K I P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 224 AY-YCGRCRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY +Y + G WY DDT V+ D +V
Sbjct: 282 ---QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKAR-HGAWYKMDDTKVTSCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|76156642|gb|AAX27807.2| SJCHGC04287 protein [Schistosoma japonicum]
Length = 222
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 15/186 (8%)
Query: 195 LRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETLHNTCQY----CK 249
LRS+V+C+NC TST +++F LSLP+ L +CL F E + C++ C
Sbjct: 28 LRSTVKCNNCHVTSTTFDVFMVLSLPIEQNNTCQLTDCLKLFLEKEEMVGQCRWHCPTCN 87
Query: 250 KQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDMEYYISASGRRVE 307
+ D K E+ +LP LI+ KRF + +K T+ + FP E LDM +I G ++
Sbjct: 88 TRRDASKWIELWKLPTYLIIHLKRFRYEYDTWRKQTTNVDFPVESLDMSPFIV--GPKLH 145
Query: 308 SRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGA 367
S Y L +V NH G T GHYT +CR GRWY YDD VS ++ +++ A
Sbjct: 146 SS-EYALYSVLNHRG-TMESGHYTTFCRNIRDGRWYEYDDENVSLLNKNQIQND----NA 199
Query: 368 YILVYQ 373
YIL Y+
Sbjct: 200 YILFYE 205
>gi|383858607|ref|XP_003704791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Megachile
rotundata]
Length = 880
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 164/377 (43%), Gaps = 81/377 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ------LVDALVNFMK 60
G+ N GNTCY+NS LQ L + PA N LL++ H SK + L A+ ++
Sbjct: 125 GMYNVGNTCYLNSTLQALFHIPALVNWLLSDS---HHTSKCEQNDGGGECLTCAVAKTLQ 181
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ I L+ + QQ+DA EFL YLL + E+A
Sbjct: 182 FSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGM-EKA----------- 229
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
Y + + ++ +S K T+ + +IF
Sbjct: 230 ----------------YLTRHKASKLDSYS----------------KETTPINQIF---- 253
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
GG +R+ V+C C+ ST ++ F +L + + TL E L +F+ E
Sbjct: 254 ------GG-----YIRTEVKCLQCRHVSTTFQHFQDLLVDIR-KASTLDEALTSYFSREQ 301
Query: 241 LHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
L N C+ CKK+ K + ++R P VL + KRFS K++ I F ++ +DM
Sbjct: 302 LDNNDYKCEACKKRVPATKQFSLERPPKVLCVQLKRFSV-LGGKISKHIGF-KQSIDMGP 359
Query: 298 YI-SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
Y+ G ++ TY L ++ H+G + GHYTA + TG++Y +DD+ V P+
Sbjct: 360 YLWREPGEPIQP-LTYKLMSIVTHMGPSVNCGHYTAVA-KVSTGQYYSFDDSCVRPISLS 417
Query: 357 TVESAEAEHGAYILVYQ 373
+ S AYI++++
Sbjct: 418 NMLST----NAYIMIFE 430
>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + + ++S DIF G RS ++C +C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSEPTSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + +V + W+ ++ GE
Sbjct: 198 LDI---------------------SSAQSVNQALWDTE-------------KSEELRGEN 223
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
+ C C+++ K I P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 224 AY-YCGRCRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY +Y + G WY DDT V+ D +V
Sbjct: 282 ---QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKAR-HGAWYKMDDTKVTSCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|340716721|ref|XP_003396843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
terrestris]
Length = 875
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 159/376 (42%), Gaps = 79/376 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ------LVDALVNFMK 60
G+ N GNTCY+NS LQ L + PA N LL++ H SK + L A+ ++
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDS---HHTSKCEQNDGGGECLTCAVAKTLQ 181
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ I L+ + QQ+DA EFL YLL + +
Sbjct: 182 SSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEK------------- 228
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
++ A H K S K T+ + +IF
Sbjct: 229 ----------AYLARHKASKLD---------------------SYSKETTPINQIF---- 253
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
GG +R+ V+C C+ ST ++ F +L + + TL E L+ +F+ E
Sbjct: 254 ------GG-----YIRTEVKCLQCRHVSTTFQHFQDLLVDIRKAS-TLDEALSSYFSREQ 301
Query: 241 LHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +DM
Sbjct: 302 LDNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSV-LGGKISKHIGF-KQTIDMGP 359
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
Y+ TY L ++ H+G + GHYTA + TG++Y +DD+ V P+
Sbjct: 360 YLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVA-KVSTGQYYSFDDSCVRPLSLSN 418
Query: 358 VESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 419 VFST----NAYIMIFE 430
>gi|163914907|ref|NP_001106637.1| ubiquitin specific peptidase 46 [Xenopus (Silurana) tropicalis]
gi|160774253|gb|AAI55531.1| LOC100127879 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 163/393 (41%), Gaps = 88/393 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + P K L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRKKE--SLLTCLADLFNSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 96 KKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLLEERK--QEKQNGKL 153
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
Q G+ A + + ++ + +IF G L + RC NC+ S+ E F +LS
Sbjct: 154 -------QNGTLEA----PEPEKSDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLS 202
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 203 VDVE--------------------QNTSITH-------------------CLRGFSNTET 223
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 224 LCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP-- 280
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY + G W L+DD +V
Sbjct: 281 -LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVE 336
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 337 KIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 368
>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 158/372 (42%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + + ++S DIF G RS ++C +C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSEPTSEDSSPIHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + +V + W+ ++ GE
Sbjct: 198 LDI---------------------SSAQSVNQALWDTE-------------KSEELRGEN 223
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
+ C C+++ K I P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 224 AY-YCGRCRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY +Y + G WY DDT V+ D +V
Sbjct: 282 ---QPTGGPLPYALYAVLVHEGATCHSGHYFSYVKAR-HGAWYKMDDTKVTSCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 154/372 (41%), Gaps = 71/372 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC+ N+VLQCL+ TP N+ ++ QG+ DAL + + +S
Sbjct: 38 GLLNVGNTCFCNAVLQCLTYTPPLANLCKAQEHSKRITRDGQGKF-DALKEVERHIITSS 96
Query: 67 NL---VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
VL I+ + R + +Q+DA EF L+ A++ A + ++ S YS
Sbjct: 97 RCTQGVLKPSNIVNSFRKIGARLRLGRQEDAHEFTRLLMEAMH-LADLAACRFTESPYS- 154
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + + IF G LRS VRC C+ S Y+ F +LSL +
Sbjct: 155 ------------------RAAQTGLVHGIFGGHLRSQVRCETCRYNSNTYDAFLDLSLEI 196
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
K+ + + + P G Y+
Sbjct: 197 ---------------------KKADNITDALRLFTKPEILDGNNKYK------------- 222
Query: 244 TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGLDMEYYIS 300
C +C ++ K + + R P VL L KRF ++++ K++ + F + L ++ Y+S
Sbjct: 223 -CSHCGCKTRATKRFSVHRAPLVLQLHLKRFETSWSGNSCKLSKHVMF-EQTLQLDPYMS 280
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
G + SR Y+L V H G + GHY A+ + G WY DD V Q S
Sbjct: 281 -EGEKAGSR--YNLYGVVVHSGHSMKSGHYYAFV-KNSNGVWYEMDDDSVR----QVSYS 332
Query: 361 AEAEHGAYILVY 372
A A AY+L Y
Sbjct: 333 AVARQQAYMLFY 344
>gi|242000848|ref|XP_002435067.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498397|gb|EEC07891.1| conserved hypothetical protein [Ixodes scapularis]
Length = 830
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 33/253 (13%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
SV SD+F G++ SSV+C C ST E F +LSLP+P L+ S+
Sbjct: 357 SVVSDVFDGRILSSVQCLTCDTVSTTRETFQDLSLPIPGRDHLAVLHAAAAAGGQGGSSP 416
Query: 205 KRTST----------------VYEIF-WELSLPVPPGGGTLYECLNKFFNGETLHN---- 243
TS + +F W PG G L +CL FF+ + L
Sbjct: 417 HGTSRGPPMDPTASQSWLSWLLTRMFSWVFGWLWGPGVG-LQDCLAAFFSADELKGDNMY 475
Query: 244 TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISA 301
+C+ C+K + +K + +LP VL + KRF F+ K+ S + FP +GLDM ++
Sbjct: 476 SCEKCRKLRNGIKFSRVLQLPEVLCIHLKRFRHEVMFSSKIGSYVSFPLDGLDMSPFLHR 535
Query: 302 SGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESA 361
R + YDL AV H G TA GHYT Y +WY +DD V+ V+ Q V++
Sbjct: 536 ECPRTST--IYDLMAVICHHG-TAGSGHYTTYALNHLNDQWYEFDDQYVTSVEPQVVQNC 592
Query: 362 EAEHGAYILVYQR 374
E AY+L Y++
Sbjct: 593 E----AYVLFYRK 601
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTCY+N+ LQ LSN P N L+ + P SK G L + + ++ MW
Sbjct: 156 GLTGLQNLGNTCYMNAALQALSNCPQLTNFFLDCGSLV-PSSKKPG-LSKSYMRLVREMW 213
>gi|91078882|ref|XP_972954.1| PREDICTED: similar to Ubiquitin-specific protease 36 CG5505-PA
[Tribolium castaneum]
gi|270003709|gb|EFA00157.1| hypothetical protein TcasGA2_TC002978 [Tribolium castaneum]
Length = 739
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 160/373 (42%), Gaps = 77/373 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY+NS LQ L + PA N L+++ S G + + K + S
Sbjct: 112 GMINMGNTCYLNSTLQALFHVPALVNWLISDKEHTAECQDSGGLCI--ICAMRKTLQDSQ 169
Query: 67 NLVLNTKAILL---ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
NT LL LR + +Q+DA EFL YL+ A+ +
Sbjct: 170 QRNTNTIRPLLIYNKLRLVCRNLIPGRQEDAHEFLRYLVEAMEKS--------------- 214
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
Y +F+ S F S K T+ + +I
Sbjct: 215 -------------YLSRFKN--HSEFD-------------SKVKETTPLNQIL------- 239
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
GG LRS+VRC C ST ++ F +L L + TL E L +F+ E L +
Sbjct: 240 ---GG-----YLRSAVRCLKCGHVSTTFQHFQDLLLDIR-KAQTLDEALEGYFSREKLDD 290
Query: 244 T---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
CQ C+K+ K + ++R P VL + KRFS + K+T I F R+ LD+ Y
Sbjct: 291 DSYHCQSCQKKVPATKQFSLERAPMVLCIQLKRFSVS-NNKITKHIHF-RQRLDLTRY-- 346
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ R Y L A+ H+G T GHYTA + +G +Y +DD++V + Q V +
Sbjct: 347 -ARHRPSVPLIYRLVALVTHMGPTVNCGHYTAVA-QAPSGNFYQFDDSMVRVISHQAVFN 404
Query: 361 AEAEHGAYILVYQ 373
AYI++Y+
Sbjct: 405 T----NAYIMLYE 413
>gi|350421826|ref|XP_003492969.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
impatiens]
Length = 875
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 159/376 (42%), Gaps = 79/376 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ------LVDALVNFMK 60
G+ N GNTCY+NS LQ L + PA N LL++ H SK + L A+ ++
Sbjct: 125 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDS---HHTSKCEQNDGGGECLTCAVAKTLQ 181
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ I L+ + QQ+DA EFL YLL + +
Sbjct: 182 SSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEK------------- 228
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
++ A H K S K T+ + +IF
Sbjct: 229 ----------AYLARHKASKLD---------------------SYSKETTPINQIF---- 253
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
GG +R+ V+C C+ ST ++ F +L + + TL E L+ +F+ E
Sbjct: 254 ------GG-----YIRTEVKCLQCRHVSTTFQHFQDLLVDIRKAS-TLDEALSSYFSREQ 301
Query: 241 LHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEY 297
L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +DM
Sbjct: 302 LDNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSV-LGGKISKHIGF-KQTIDMGP 359
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
Y+ TY L ++ H+G + GHYTA + TG++Y +DD+ V P+
Sbjct: 360 YLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVA-KVSTGQYYSFDDSCVRPLSLSN 418
Query: 358 VESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 419 VFST----NAYIMIFE 430
>gi|410918554|ref|XP_003972750.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Takifugu
rubripes]
Length = 693
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 168/462 (36%), Gaps = 131/462 (28%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPD---SKSQGQLV----- 52
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D+ + S QGQLV
Sbjct: 267 VTPGVTGLRNLGNTCYMNSILQVLSHLHVFRECFLRLDLTQALELLASAVQGQLVGKISH 326
Query: 53 ---------------------------------------------DALVNFMKMMWSSGN 67
L ++MWS
Sbjct: 327 LSLTQRKGFQSSSGSGSGLSGGASRGRSMELIQPKEPSSEHISLCHELHTLFQVMWSGKW 386
Query: 68 LVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSK 127
+++ A+L ++ F G QQDAQEFL LL + E + + T +
Sbjct: 387 ALVSPFAMLHSVWQLIPAFRGYAQQDAQEFLCELLDKVQHELESAGKHTTTTGVPQTQKR 446
Query: 128 QVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG 187
+ SV + IF GQL S V C C S E FW+LSL P
Sbjct: 447 LIKQV-------------LSVVNTIFHGQLLSQVTCLACGHRSNTVEPFWDLSLEFP--- 490
Query: 188 GTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN---T 244
Y R S ++C L E L KF E L
Sbjct: 491 -ERYHSNSRESAAQTSCH----------------------LTEMLAKFTETEALEGNIYA 527
Query: 245 CQYC-----KKQSDLVKLYEIQ------RLPPVLILWFKRF---SSNFTQKVTSPIKFPR 290
C +C + S V L E Q +LP VL L KRF N +K+ + F
Sbjct: 528 CDHCNSARRRTTSKSVLLTEAQKRLMVHKLPQVLRLHLKRFRWSGRNHREKIGVHVSFD- 586
Query: 291 EGLDMEYYI-----------------SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAY 333
+ LD+E Y ++G + YDL AV H GK GHYT+Y
Sbjct: 587 QLLDVEPYCYQEPSPKDLSCSSPSSPVSAGSPHHKHFLYDLSAVVMHHGKGFGSGHYTSY 646
Query: 334 CRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
C G W +D+ ++ + V A+ AYIL Y +R
Sbjct: 647 CYNTEGGFWVHCNDSKLNVCSVEEVCRAQ----AYILFYTQR 684
>gi|365981869|ref|XP_003667768.1| hypothetical protein NDAI_0A03680 [Naumovozyma dairenensis CBS 421]
gi|343766534|emb|CCD22525.1| hypothetical protein NDAI_0A03680 [Naumovozyma dairenensis CBS 421]
Length = 1116
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 160/409 (39%), Gaps = 85/409 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSK--SQGQLVDALVNFMKMM 62
G+ N GN+CY+N ++QCL T + LN I+ +SK S+G L L + +M
Sbjct: 748 GLQNMGNSCYLNCIIQCLLGTHELTKIFLNYSFERYINLNSKLGSKGVLAKNLSKLIHLM 807
Query: 63 WS--------------SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE 108
++ SGN + +A S F QQD QEF +LL AL+E+
Sbjct: 808 YNHSTLKNNGDKTKKKSGNNFIKPIQFRMACGSINNLFKNCSQQDCQEFCQFLLDALHED 867
Query: 109 AKVV---PDQYNGSTYSNTSSKQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRC 163
P ST + + +++ S R WE++ TT+ SV D+F GQ S ++C
Sbjct: 868 LNQCGSNPPLKELSTKAESMREKL-SLRIASSIEWERYLTTDFSVIVDLFQGQYASRLQC 926
Query: 164 SNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 223
C TST Y+ F LS+P+P
Sbjct: 927 KTCIHTSTTYQPFSVLSVPIPKKKNL---------------------------------- 952
Query: 224 GGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT 279
L +C F E L C CK + K I RLP LI+ KRF +N
Sbjct: 953 ---NLLDCFKDFTKIENLEVDEQWFCPNCKSKQPSTKKLTITRLPRNLIIHLKRFDNNLN 1009
Query: 280 QKVTSPIKFP---------REGLDMEYYISASG----RRVESRYTYDLCAVSNHIGKTAL 326
+ I +P + D E + R + Y L + H G +L
Sbjct: 1010 KNNNL-IDYPFILDLTQFWADDFDGELPPGVTDELPKRGQIPPFKYRLYGAALHFG--SL 1066
Query: 327 Y-GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
Y GHYTA+ + WY +DDT P+ E AY+L Y R
Sbjct: 1067 YGGHYTAFVNKGIRNGWYYFDDTNYRPIKN---EREPISSNAYVLFYHR 1112
>gi|242020942|ref|XP_002430906.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212516124|gb|EEB18168.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 945
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 19/240 (7%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT--LYECQL--RSSVRCS 202
S+ SD+F G+L SSV+C C + ST E F +LSLP+P L++ + +S CS
Sbjct: 350 SIISDLFDGKLLSSVQCLTCNKISTRVETFQDLSLPIPSRDHVTMLHQGSISPQSMTTCS 409
Query: 203 NC-KRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFNGETLHN----TCQYCKKQSDLVK 256
K + WE G +L++CL FF+ + L +C+ C K + VK
Sbjct: 410 ETYKGKPSWVSWLWEWMKSWFWGPTVSLHDCLAAFFSADELKGDNMYSCEKCSKLRNGVK 469
Query: 257 LYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDL 314
++ LP VL + KRF F+ K+ S + FP GL+M Y+ + + +YDL
Sbjct: 470 YSKVLDLPEVLCIHLKRFRHELAFSSKINSFVNFPLTGLNMRPYLHKDCKSEVT--SYDL 527
Query: 315 CAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+V H G TA GHYT Y TG WY DD V+ V +TV + E Y+L Y++
Sbjct: 528 TSVICHHG-TANGGHYTCYALSPFTGEWYELDDQCVTQVAPETVSNVE----CYVLFYKK 582
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW--- 63
G+ N GNTCY+N+ LQ L NT L + ++ + L K MW
Sbjct: 125 GLQNIGNTCYMNAALQALCNTTPLSQYFLQ--CLVLASNQEKLTLSKNFQRLNKEMWQRN 182
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
S G +V IL +R+ F G QQ D QEFL + L+EE K
Sbjct: 183 SPGCIV--PSGILYGIRNIHPMFRGYQQHDTQEFLRCFMDQLHEELK 227
>gi|345485737|ref|XP_003425327.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 2
[Nasonia vitripennis]
Length = 888
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 162/380 (42%), Gaps = 80/380 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---------DIPIHPDSKSQGQ-LVDALV 56
G+ N GNTCY+NS LQ L + PA N LL++ ++ H S G+ L A+
Sbjct: 126 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNVRHHYFSDGAGECLTCAVS 185
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
++ + + L+ + QQ+DA EFL YLL + +
Sbjct: 186 KTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEK--------- 236
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
++ A H K S K T+ + +IF
Sbjct: 237 --------------AYLARHKALKLD---------------------SYSKETTPINQIF 261
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
GG + R+ V+C CK ST ++ F +L L + GTL E L +F
Sbjct: 262 ----------GGYI-----RTEVKCLQCKHVSTTFQHFQDLLLDIRK-AGTLDEALAGYF 305
Query: 237 NGETLHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGL 293
+ E L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +
Sbjct: 306 SQEHLDNNDYKCEACKRRVPATKQFILERPPKVLCVQLKRFSV-LGGKISRHIGF-KQTV 363
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
DM Y+ S+ Y L ++ H+G + GHYTA + +G++Y +DD+ V P+
Sbjct: 364 DMGPYVRRQPGEQPSKLIYRLASMVTHMGPSVNCGHYTAIA-QVSSGKFYSFDDSSVRPI 422
Query: 354 DAQTVESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 423 SLNNVVST----NAYIMIFE 438
>gi|357622965|gb|EHJ74305.1| hypothetical protein KGM_18534 [Danaus plexippus]
Length = 933
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 116/235 (49%), Gaps = 23/235 (9%)
Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
S+ SD+F G+L SSV+C C R ST E F +LSLP+P L + +
Sbjct: 382 SIISDVFDGKLLSSVQCLICDRVSTRVETFQDLSLPIPSRE------HLAMLHHTPHTDQ 435
Query: 207 TSTVYEIF-WELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQ 261
S ++ +F W S P +L +CL FF+ + L +C C K + VK+ +
Sbjct: 436 DSWLWWLFSWFRSWLYGP-AVSLQDCLAAFFSADELKGDNMYSCSRCNKLRNGVKMSGVI 494
Query: 262 RLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSN 319
RLP VL + KRF F+ KV + + FP L+M Y SRY+ LCAV
Sbjct: 495 RLPEVLCVHLKRFRHELMFSAKVAARVSFPINDLNMAPYCHKECTSSVSRYS--LCAVIC 552
Query: 320 HIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
H G TA GHYT R + RWY +DD V+P+ + S E AY+L Y++
Sbjct: 553 HAG-TAGGGHYTCVARVD--DRWYSFDDASVTPLTTHHLASCE----AYVLFYRK 600
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--NEDIPIHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+N+ LQ LSNT + L + + + K G + A ++
Sbjct: 147 GLVGLQNMGNTCYMNAALQALSNTQPLTSYFLECSAAVALLVGDKKPG-ISRAYQKLIRE 205
Query: 62 MWS---SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
MWS G +V N IL +R+ F G QQ D QEFL + L+EE K
Sbjct: 206 MWSRKTRGYVVPN--GILYGIRNVHPMFRGYQQHDTQEFLRCFMDQLHEELK 255
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 154/372 (41%), Gaps = 84/372 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMKMMWS 64
G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V +
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 145
Query: 65 SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
SG+++ ++ + A Y QQ+DA EFL++ L ++E
Sbjct: 146 SGDIMKPSQILTSAFHKY-------QQEDAHEFLMFTLETMHE----------------- 181
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
S +H + + ++S DIF G RS ++C C+ TS Y+ F ++ L +
Sbjct: 182 ------SCLQVHRQSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDI- 234
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
+V + W+ E LH
Sbjct: 235 --------------------SSAQSVNQALWDTE------------------KSEELHGE 256
Query: 245 ----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
C C+++ K + P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 257 NAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYP-EFLDLKPYLS 315
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY C + G G+WY DDT V+ D +V
Sbjct: 316 ---QPTAGPLPYALYAVLVHDGATCHSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV-- 369
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 370 --LNENAYVLFY 379
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 154/372 (41%), Gaps = 84/372 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMKMMWS 64
G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V +
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 65 SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
SG+++ ++ + A Y QQ+DA EFL++ L ++E
Sbjct: 112 SGDIMKPSQILTSAFHKY-------QQEDAHEFLMFTLETMHE----------------- 147
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
S +H + + ++S DIF G RS ++C C+ TS Y+ F ++ L +
Sbjct: 148 ------SCLQVHRQSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDI- 200
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
+V + W+ E LH
Sbjct: 201 --------------------SSAQSVNQALWDTE------------------KSEELHGE 222
Query: 245 ----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
C C+++ K + P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 223 NAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY C + G G+WY DDT V+ D +V
Sbjct: 282 ---QPTAGPLPYALYAVLVHDGATCHSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|403307110|ref|XP_003944051.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Saimiri
boliviensis boliviensis]
Length = 674
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 324 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 382
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 383 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQETNN 439
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 440 PNCCNC------------------IIDQIFTGGLQSDVTCQTCHSVSTTIDPCWDISLDL 481
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 482 -PGSCATFDSQ--------NPERAGSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 527
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 528 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 586
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 587 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 644
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 645 DAIITKATIEDLLYSE----GYLLFYHKQ 669
>gi|344233822|gb|EGV65692.1| cysteine proteinase [Candida tenuis ATCC 10573]
Length = 481
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 145/374 (38%), Gaps = 66/374 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G N G+TC+I+S+LQ L + P + N D S+ F +
Sbjct: 164 GLKGFVNFGSTCFISSILQTLIHNPMLKREFFNSDEHYFNCDVSECITCSIDKIFTEFFT 223
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
SS N +L+ K G ++QDA EF YLL
Sbjct: 224 SSNNDSFGMTNLLINSWYKNKSLTGYEEQDAHEFWQYLL--------------------- 262
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
F H K E VF G C K
Sbjct: 263 ------NEFHKDHMRLKSDMGENDVF-----GHTYEDCDCITHKH--------------- 296
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVP--PGGGTLYECLNKFFNGETL 241
+ +L S + CS+C T+ + +LSL + P T+Y+CLN F ETL
Sbjct: 297 -------FAGELESLIMCSDCDNTTRTIDPIMDLSLELTNLPDHSTVYDCLNLFTKEETL 349
Query: 242 HN-TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTS--PIKFPREGLDMEYY 298
N CQ+C K S K +I ++ VL + KRF N + + PI+ P L++ Y
Sbjct: 350 ENYKCQFCNKNSKPKKSLKINKMSSVLSIQLKRFKHNVNSFIKNDIPIRNPL-YLNLSDY 408
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+S + Y+L A+ HIG GHY + E +W +DD++++ V Q +
Sbjct: 409 LSQDSNEGSTNQFYELFALVVHIGSVNT-GHYVVLIKTEN-NQWLKFDDSIITLVPQQEI 466
Query: 359 ESAEAEHGAYILVY 372
ES AY+L Y
Sbjct: 467 ESI----NAYLLFY 476
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 154/372 (41%), Gaps = 84/372 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMKMMWS 64
G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V +
Sbjct: 85 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 144
Query: 65 SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
SG+++ ++ + A Y QQ+DA EFL++ L ++E
Sbjct: 145 SGDIMKPSQILTSAFHKY-------QQEDAHEFLMFTLETMHE----------------- 180
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
S +H + + ++S DIF G RS ++C C+ TS Y+ F ++ L +
Sbjct: 181 ------SCLQVHRQSEPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDI- 233
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
+V + W+ E LH
Sbjct: 234 --------------------SSAQSVNQALWDTE------------------KSEELHGE 255
Query: 245 ----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
C C+++ K + P VL+L KRFS+ K+ + +P E LD++ Y+S
Sbjct: 256 NAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYP-EFLDLKPYLS 314
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
+ Y L AV H G T GHY C + G G+WY DDT V+ D +V
Sbjct: 315 ---QPTAGPLPYALYAVLVHDGATCHSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV-- 368
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 369 --LNENAYVLFY 378
>gi|90076018|dbj|BAE87689.1| unnamed protein product [Macaca fascicularis]
Length = 256
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 50/247 (20%)
Query: 133 RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 192
RA W+++ E S D+FVGQL+S ++C C ST +E+F +LSLP+P G
Sbjct: 45 RANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKG----- 99
Query: 193 CQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYC 248
G +L +C N F E L + C C
Sbjct: 100 ----------------------------FAGGKVSLRDCFNLFTKEEELESENAPVCDRC 131
Query: 249 KKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRV 306
++++ K +QR P +L+L RFS++ +K + + FP + L + + S
Sbjct: 132 RQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKA--- 188
Query: 307 ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHG 366
Y L A+ NH G + YGHYTA CR + TG W++Y+D+ VSPV V S+E
Sbjct: 189 -GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG-WHVYNDSRVSPVSENQVASSE---- 240
Query: 367 AYILVYQ 373
Y+L YQ
Sbjct: 241 GYVLFYQ 247
>gi|219990699|gb|ACL68723.1| MIP01435p [Drosophila melanogaster]
Length = 243
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 19/196 (9%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP--IHPDSKSQGQLVDALVNFMKM 61
GL G+ N GNTCY+NS+LQCLSNTP +++ I +K+ GQ+++ + +K
Sbjct: 32 GLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKE 91
Query: 62 MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV--VPDQYNGS 119
+W+ + ++ + + Y K F G QQD+ EFL L+ L+ + + VP Q
Sbjct: 92 LWNGQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMI 151
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
+ S + W +F + S+ +F GQ++S+V+C C + S YE F L
Sbjct: 152 SASEKA------------WLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNL 199
Query: 180 SLPVPPGGGTLYECQL 195
SL +PP CQL
Sbjct: 200 SLELPPNSNV---CQL 212
>gi|345485740|ref|XP_003425328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 3
[Nasonia vitripennis]
Length = 895
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 162/380 (42%), Gaps = 80/380 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNE---------DIPIHPDSKSQGQ-LVDALV 56
G+ N GNTCY+NS LQ L + PA N LL++ ++ H S G+ L A+
Sbjct: 126 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDAHHESKCEQNVRHHYFSDGAGECLTCAVS 185
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQY 116
++ + + L+ + QQ+DA EFL YLL + +
Sbjct: 186 KTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEK--------- 236
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
++ A H K S K T+ + +IF
Sbjct: 237 --------------AYLARHKALKLD---------------------SYSKETTPINQIF 261
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
GG + R+ V+C CK ST ++ F +L L + GTL E L +F
Sbjct: 262 ----------GGYI-----RTEVKCLQCKHVSTTFQHFQDLLLDIRK-AGTLDEALAGYF 305
Query: 237 NGETLHNT---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGL 293
+ E L N C+ CK++ K + ++R P VL + KRFS K++ I F ++ +
Sbjct: 306 SQEHLDNNDYKCEACKRRVPATKQFILERPPKVLCVQLKRFSV-LGGKISRHIGF-KQTV 363
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
DM Y+ S+ Y L ++ H+G + GHYTA + +G++Y +DD+ V P+
Sbjct: 364 DMGPYVRRQPGEQPSKLIYRLASMVTHMGPSVNCGHYTAIA-QVSSGKFYSFDDSSVRPI 422
Query: 354 DAQTVESAEAEHGAYILVYQ 373
V S AYI++++
Sbjct: 423 SLNNVVST----NAYIMIFE 438
>gi|397465305|ref|XP_003804442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pan paniscus]
Length = 687
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 337 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 395
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 396 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 452
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 453 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 494
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 495 -PGSCATFDSQ--------NPERADSAVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 540
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 541 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 599
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 600 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 657
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 658 DAIITKATIEDLLYSE----GYLLFYHKQ 682
>gi|326432192|gb|EGD77762.1| hypothetical protein PTSG_08851 [Salpingoeca sp. ATCC 50818]
Length = 1156
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 153/377 (40%), Gaps = 78/377 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP-IHPDSKSQGQLVDALVNFMKMMWSS 65
G+ N GNTC++N+ LQCL+ TPA N L+ H + ++ + + S
Sbjct: 113 GLGNLGNTCFLNATLQCLAYTPALANFCLSGQYQRTHTPQPGFDAMKLVELHVHRSLTSP 172
Query: 66 GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTS 125
VL K I+ LR K F QQQDA EF + LL A+
Sbjct: 173 KRTVL-PKGIINHLRQINKAFRHYQQQDAHEFFICLLDAMQ------------------- 212
Query: 126 SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
+ +G ++ L + E +V IF G LRS
Sbjct: 213 TALLGDYKNL----DLRVQETTVLHHIFGGYLRSQ------------------------- 243
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT- 244
++C CK S +E F++LS+ + +L L +F E L T
Sbjct: 244 -------------IQCVRCKHCSNTFESFFDLSIDI-KAANSLTRALQQFVTKELLFKTN 289
Query: 245 ---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDMEYYI 299
C CK + K I RLP VL + KRFS S+F K+ + +P + L++ ++
Sbjct: 290 SYSCSGCKNKVPATKQLTIHRLPNVLCIQLKRFSFMSHFGSKLRHKVSYPMQ-LNVHEFL 348
Query: 300 SASGRRVESRYT--YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
S S R SR Y+L V H+G T GHY AY R G WY DD V +
Sbjct: 349 SRSIRSRISRGACRYELYGVLVHLGATLSSGHYIAYV-RAANGMWYCADDDDVR----FS 403
Query: 358 VESAEAEHGAYILVYQR 374
E+ AY+L Y R
Sbjct: 404 KENEVLNQAAYMLFYTR 420
>gi|291407536|ref|XP_002720078.1| PREDICTED: ubiquitin thiolesterase 3-like [Oryctolagus cuniculus]
Length = 706
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 164/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L+ S S LV + + M+
Sbjct: 356 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSNKHKCIMTSPSLC-LVCEMSSLFHAMY 414
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G SN
Sbjct: 415 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSVGQESSN 471
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
++ + IF G L+S V C C ST + W++SL +
Sbjct: 472 SNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 513
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P T + + S R + PG +L +CL F E L +
Sbjct: 514 PGSCATFSP--QNTEMADSTMSRADHI------------PGIPSLTDCLQWFTRPEDLGS 559
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 560 SAKIKCSSCQSYQESTKQLTMKKLPMVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 618
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 619 FLASTKESRMKECQPSTDCVSNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 676
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 677 DAIITKATIEDLLYSE----GYLLFYHKQ 701
>gi|344252454|gb|EGW08558.1| Ubiquitin carboxyl-terminal hydrolase 21 [Cricetulus griseus]
Length = 484
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 122/287 (42%), Gaps = 56/287 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-----KVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
+G S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPS--PPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLIL 269
+C + F E L + C C++++ K +QR P +L+L
Sbjct: 418 ---DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVL 461
>gi|324504579|gb|ADY41976.1| Ubiquitin carboxyl-terminal hydrolase 4 [Ascaris suum]
Length = 847
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNF 58
PG+ G+ N GNTC++NS LQCLSN LN DI GQL A +
Sbjct: 251 PGVCGLENLGNTCFMNSALQCLSNVRELTEYFLNGCYKHDINEENVLGMHGQLARAYADL 310
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
M+ +W+ N + + + L Y ++F G Q D+QE L +LL L+E+ V +
Sbjct: 311 MEQLWNGSNRSMAPRKLKAVLGQYVQQFSGYSQHDSQELLSFLLDGLHEDLNRVKKKV-- 368
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ S + S A W+ ++ SV D GQL+S+V C CK S ++ F
Sbjct: 369 YLEAKDSGGRPDSVVAAEAWQMYKMGNDSVIVDYLHGQLKSTVVCPQCKFVSVKFDPFCF 428
Query: 179 LSLPVPP 185
LSLP+PP
Sbjct: 429 LSLPLPP 435
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 82/164 (50%), Gaps = 28/164 (17%)
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT- 279
G + EC + F E L + C CK+ K ++ +LPPVLI+ KRF +FT
Sbjct: 678 GADINECFHLFTRQELLSDGNLWYCSRCKEHQHATKKLDLWKLPPVLIIHLKRF--HFTR 735
Query: 280 ---QKVTSPIKFPREGLDMEYYISASGRRVESRY---TYDLCAVSNHIGKTALYGHYTAY 333
+K+ P++FP GLD+ + R V+ ++ YDL AVSNH G GHY A+
Sbjct: 736 WSREKIDIPVEFPLTGLDL------TSRVVDEKFGKAVYDLIAVSNHAGGLG-GGHYWAW 788
Query: 334 CRREGTGRWYLYDDTVVS--PVDAQTVESAEAEHGAYILVYQRR 375
R WY ++D VS P + S E AY+L Y++R
Sbjct: 789 AR--NGDDWYDFNDASVSAMPQPNDPIVSKE----AYVLFYRKR 826
>gi|169619930|ref|XP_001803377.1| hypothetical protein SNOG_13165 [Phaeosphaeria nodorum SN15]
gi|160703927|gb|EAT79492.2| hypothetical protein SNOG_13165 [Phaeosphaeria nodorum SN15]
Length = 942
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 158/374 (42%), Gaps = 79/374 (21%)
Query: 42 HPDSKSQGQLVDALVNFMKMMWSS-GNLVLNT-KAILLALRSYTKKFDGNQQQDAQEFLL 99
+PD + + ++D ++ + LV N K + ++R T ++ +QQQDA+EFL
Sbjct: 599 YPDVEVEQSMIDNWKGTKGILPEAYATLVSNLFKGDVSSVRPSTFRWGIDQQQDAKEFLE 658
Query: 100 YLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSF----RALHYWEKFQTTEASVFSDIFVG 155
++L ++E+ V ++ ++ Q F A W ++Q + SV +F G
Sbjct: 659 FVLDYMHEDLNVTWNKAPLRPLTDAQEIQREQFPRQYAAKIEWGRYQHRDMSVIGGMFAG 718
Query: 156 QLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFW 215
Q + QL C C TST YE FW
Sbjct: 719 Q----------------------------------HASQLT----CQTCGVTSTTYEAFW 740
Query: 216 ELSLPVPPGGG-TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILW 270
LSL +P +L +CL + E L C CKK + VK + R P L++
Sbjct: 741 SLSLEIPNVEACSLRDCLQSYCAAERLAGDELWRCPQCKKDREAVKKITLTRAPDTLVVH 800
Query: 271 FKRFSSNFTQ---KVTSPIKFPREGLDM------------EYYISASGRRVESR------ 309
FKRFS++ T+ K+ +P++FP + LDM E +I+ + R S+
Sbjct: 801 FKRFSASRTESARKIRTPVEFPLQSLDMGPFIEPPMTPKEEEFIANNARDGHSQLAGIKA 860
Query: 310 -------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
+ Y+ AV HIG T GHY A+ + + G W ++D ++ + + S
Sbjct: 861 DPHMNGPFIYNAYAVIWHIGATLGSGHYIAFVKDKAKGTWRSFNDDKITEFEPANLASQH 920
Query: 363 --AEHGAYILVYQR 374
AYI+ Y+R
Sbjct: 921 RLQNEKAYIVFYER 934
>gi|114688817|ref|XP_521085.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 isoform 2 [Pan
troglodytes]
Length = 711
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 361 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 419
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 420 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 476
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 477 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 518
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 519 -PGSCATFDSQ--------NPERADSAVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 564
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 565 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 623
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 624 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 681
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 682 DAIITKATIEDLLYSE----GYLLFYHKQ 706
>gi|41152235|ref|NP_958443.1| ubiquitin carboxyl-terminal hydrolase 51 [Homo sapiens]
gi|52000873|sp|Q70EK9.1|UBP51_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 51; AltName:
Full=Deubiquitinating enzyme 51; AltName: Full=Ubiquitin
thioesterase 51; AltName:
Full=Ubiquitin-specific-processing protease 51
gi|40788183|emb|CAE47750.2| ubiquitin specific proteinase 51 [Homo sapiens]
gi|47174857|tpe|CAE48396.2| TPA: ubiquitin specific protease-51 [Homo sapiens]
gi|225000462|gb|AAI72281.1| Ubiquitin specific peptidase 51 [synthetic construct]
Length = 711
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 361 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 419
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 420 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 476
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 477 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 518
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 519 -PGSCATFDSQ--------NPERADSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 564
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 565 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 623
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 624 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 681
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 682 DAIITKATIEDLLYSE----GYLLFYHKQ 706
>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
Length = 370
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 165/395 (41%), Gaps = 91/395 (23%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR+ +L KSQ + ++L+ + ++ S
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRDKVLA--------YKSQPRKKESLLTCLADLFHSI 91
Query: 67 NL------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL + A ++ ++
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI---ADILQEE----- 143
Query: 121 YSNTSSKQVGSFR--ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
KQ G R + + T + + +IF G L + RC C+ S+ E F +
Sbjct: 144 --RKQEKQNGRLRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLD 201
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LS+ V + TS + CL F N
Sbjct: 202 LSVDVE--------------------QNTSITH-------------------CLRGFSNT 222
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFP 289
ETL + C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 223 ETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP 281
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
L++ + + SG YDL AV H G GHY A + W L+DD +
Sbjct: 282 ---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDI 335
Query: 350 VSPVDAQTVE---------SAEAEHGAYILVYQRR 375
V +DAQ +E S +E G YIL YQ R
Sbjct: 336 VEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 369
>gi|297710131|ref|XP_002831758.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Pongo abelii]
Length = 711
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 361 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 419
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 420 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 476
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 477 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 518
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 519 -PGSCATFDSQ--------NPERADSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 564
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 565 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 623
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 624 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 681
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 682 DAIITKATIEDLLYSE----GYLLFYHKQ 706
>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 159/393 (40%), Gaps = 85/393 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKIL----AYRSQPRRKENLLTCLADLFHSIANQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 96 RKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERK--QEKTNGRL 153
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ T Q + A T + +IF G L + RC C+ S+ E F +LS
Sbjct: 154 ANGTLDSQNNNSNA--------TPAPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 205
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 206 VDVE--------------------QNTSITH-------------------CLRGFSNTET 226
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 227 LCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYT-KLSYRVVFP-- 283
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 284 -LELRLF-NTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVE 339
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 340 KIDAQAIEEFYGLTSEISKNSESG-YILFYQSR 371
>gi|38259220|ref|NP_940813.1| ubiquitin carboxyl-terminal hydrolase 49 [Mus musculus]
gi|52000870|sp|Q6P9L4.1|UBP49_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 49; AltName:
Full=Deubiquitinating enzyme 49; AltName: Full=Ubiquitin
thioesterase 49; AltName:
Full=Ubiquitin-specific-processing protease 49
gi|38174228|gb|AAH60712.1| Ubiquitin specific peptidase 49 [Mus musculus]
Length = 685
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 171/455 (37%), Gaps = 125/455 (27%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED-----------------IPIHP 43
++PG+ G+ N GNTCY+NS+LQ LS+ FR LN D + P
Sbjct: 245 VAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQLSGRP 304
Query: 44 DSKSQGQLVDALVNF-----MKMMWSSG-------NLVLNTK------------------ 73
S S +L V + WSSG L+ N +
Sbjct: 305 ASSSAAELSVRSVRAQGCEPQGLCWSSGASISRSLELIQNKEPSSKHISLCHELHTLFRV 364
Query: 74 ------------AILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
A+L ++ S F G QQDAQEFL LL + +E + GST
Sbjct: 365 MWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQEL-----ESEGSTR 419
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEA--SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
R L + + + T+ V + IF GQL S V C +C S E FW+L
Sbjct: 420 -----------RILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIEPFWDL 468
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
SL P Y C + V P+ L E L KF E
Sbjct: 469 SLEFP----ERYHCIEKGFV--------------------PLNQTECLLTEMLAKFTETE 504
Query: 240 TLHN---TCQYCKKQ-----------SDLVKLYEIQRLPPVLILWFKRF---SSNFTQKV 282
L C C + S+ K I RLP VL L KRF N +K+
Sbjct: 505 ALEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREKI 564
Query: 283 TSPIKFPREGLDMEYYISAS--GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
+ F + L ME Y + + YDL AV H GK GHYTAYC G
Sbjct: 565 GVHVIFD-QVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGG 623
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
W +D S +D +VE + AYIL Y RR
Sbjct: 624 FWVHCND---SKLDVCSVEEV-CKTQAYILFYTRR 654
>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Oreochromis niloticus]
gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 372
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 159/393 (40%), Gaps = 85/393 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKIL----AYRSQPRRKENLLTCLADLFHSIANQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 96 RKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERK--QEKTNGRL 153
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ T Q + A T + +IF G L + RC C+ S+ E F +LS
Sbjct: 154 ANGTLDSQNNNSNA--------TPAPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 205
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 206 VDVE--------------------QNTSITH-------------------CLRGFSNTET 226
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 227 LCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYT-KLSYRVVFP-- 283
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 284 -LELRLF-NTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVE 339
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 340 KIDAQAIEEFYGLTSEISKNSESG-YILFYQSR 371
>gi|324513934|gb|ADY45703.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Ascaris suum]
Length = 494
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 167/402 (41%), Gaps = 94/402 (23%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVN 57
S GL G+ N GNTC++NS++Q + +TP ++ + + P HP+S+ L+ L N
Sbjct: 152 SRGLRGLVNLGNTCFMNSIIQAMVHTPHLKDYFMTDQHRCLTPSHPNSQC---LMCELSN 208
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+ + L + ++ + G +QQDA EF + L L+ +++
Sbjct: 209 TFQEFYKGDITPYKPHRFLNLVWTHARHLAGYEQQDAHEFFIAALDVLH--------RHS 260
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
GS+ T+ ++ + IF G+L+S + C NC ST + +W
Sbjct: 261 GSSSLPTTPQECN----------------CIIDWIFTGKLQSDLTCLNCGGVSTTVDPYW 304
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG---TLYECLNK 234
++SL V + +L P G +L +CL +
Sbjct: 305 DISLDVG-------------------------------QEALLSPSADGPHISLEDCLQR 333
Query: 235 FFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKF 288
+ E L + C C + K ++ LP V KRF N +K+ + + F
Sbjct: 334 YIRPEQLGSAAKIKCARCNTYEESTKQLTLKTLPMVACFHLKRFEHNSKHRKKMDTKVYF 393
Query: 289 PREGLDMEYYISASGRR----------------VESRYTYDLCAVSNHIGKTALYGHYTA 332
P + +DM + +A R ++R Y+L AV NH G T GHYT
Sbjct: 394 P-QFIDMTPFTAAYRERSIGHEQKWNSVVADALTKNRNKYELFAVVNHDG-TMESGHYTC 451
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
+ R + +W+ DD ++S +TV ++E Y+L Y +
Sbjct: 452 FIRHQH-NQWFQCDDQIISRAPVETVLASE----GYLLFYHK 488
>gi|426396116|ref|XP_004064301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Gorilla
gorilla gorilla]
Length = 648
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 298 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 356
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 357 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 413
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 414 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 455
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 456 -PGSCATFDSQ--------NPERADSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 501
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 502 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 560
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 561 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 618
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 619 DAIITKATIEDLLYSE----GYLLFYHKQ 643
>gi|426396114|ref|XP_004064300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like [Gorilla
gorilla gorilla]
Length = 469
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 119 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 177
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 178 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 234
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 235 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 276
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 277 -PGSCATFDSQ--------NPERADSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 322
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 323 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 381
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 382 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 439
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 440 DAIITKATIEDLLYSE----GYLLFYHKQ 464
>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
Length = 364
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 165/395 (41%), Gaps = 91/395 (23%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR+ +L KSQ + ++L+ + ++ S
Sbjct: 34 GLVNFGNTCYCNSVLQALYFCRPFRDKVLA--------YKSQPRKKESLLTCLADLFHSI 85
Query: 67 NL------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL + A ++ ++
Sbjct: 86 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI---ADILQEE----- 137
Query: 121 YSNTSSKQVGSFR--ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
KQ G R + + T + + +IF G L + RC C+ S+ E F +
Sbjct: 138 --RKQEKQNGRLRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLD 195
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LS+ V + TS + CL F N
Sbjct: 196 LSVDVE--------------------QNTSITH-------------------CLRGFSNT 216
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFP 289
ETL + C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 217 ETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP 275
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
L++ + + SG YDL AV H G GHY A + W L+DD +
Sbjct: 276 ---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDI 329
Query: 350 VSPVDAQTVE---------SAEAEHGAYILVYQRR 375
V +DAQ +E S +E G YIL YQ R
Sbjct: 330 VEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 363
>gi|17541074|ref|NP_501035.1| Protein H34C03.2 [Caenorhabditis elegans]
gi|351050439|emb|CCD65007.1| Protein H34C03.2 [Caenorhabditis elegans]
Length = 900
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLL--------NEDIPIHPDSKSQGQLVD 53
+PG G++N GNTC++ S QCLSN P R L NED P+ + G L
Sbjct: 271 TPGACGLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPL----GTHGHLAM 326
Query: 54 ALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP 113
A+ MK MWS +N + + + +F+G QQDA E + Y+L L+E+ +
Sbjct: 327 AVGELMKGMWSGDYASINPRKFKSIIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIK 386
Query: 114 DQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
+ S+ +K + A WE ++ S+ D GQL+S++ C C++ S +
Sbjct: 387 KKPYIED-SDEDAKLPEAEYAAKSWEVYKMRNDSIIVDTLHGQLKSTLICPVCEKISIKF 445
Query: 174 EIFWELSLPVPP 185
+ F LSLP+PP
Sbjct: 446 DPFGYLSLPLPP 457
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
L E L+ F E L C CKK K + +LP +LIL KRF +K
Sbjct: 700 LQETLDWFTTKEQLGEQDSWYCPQCKKHERATKQLALWKLPEILILHLKRFQYTKWSREK 759
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+T + P GLD+ ++ + YDL AVS H G + GHYTA + +
Sbjct: 760 LTWEVVIPVRGLDLTDKVANPNH---EKAIYDLIAVSRHYGSLS-GGHYTAIGYNDREQK 815
Query: 342 WYLYDDTVVSPV--DAQTVESAEAEHGAYILVYQRR 375
W+ ++D+ +P A+ ES++ YILVY+RR
Sbjct: 816 WFDFNDSSANPTYPPAEPYESSD----PYILVYRRR 847
>gi|119613630|gb|EAW93224.1| hCG201263, isoform CRA_b [Homo sapiens]
Length = 584
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 234 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 292
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 293 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 349
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 350 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 391
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 392 -PGSCATFDSQ--------NPERADSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 437
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 438 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 496
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 497 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 554
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 555 DAIITKATIEDLLYSE----GYLLFYHKQ 579
>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Cricetulus griseus]
Length = 450
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 160/391 (40%), Gaps = 83/391 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 120 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 175
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
V+ K + LR + FD QQDA EFL YLL + A ++ ++
Sbjct: 176 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI---ADILQEE-------RK 225
Query: 125 SSKQVGSFR--ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
KQ G R + + T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 226 QEKQNGRLRNGDVDTEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVD 285
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
V + TS + CL F N ETL
Sbjct: 286 VE--------------------QNTSITH-------------------CLRGFSNTETLC 306
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREGL 293
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP L
Sbjct: 307 SEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP---L 362
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
++ + + SG YDL AV H G GHY A + W L+DD +V +
Sbjct: 363 ELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEKI 419
Query: 354 DAQTVE---------SAEAEHGAYILVYQRR 375
DAQ +E S +E G YIL YQ R
Sbjct: 420 DAQAIEEFYGLTSDISKNSESG-YILFYQSR 449
>gi|332266327|ref|XP_003282162.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Nomascus
leucogenys]
Length = 711
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 361 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 419
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 420 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 476
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 477 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 518
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG ++ Q N +R + + PG +L +CL F E L +
Sbjct: 519 -PGSCATFDSQ--------NPERADSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 564
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 565 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 623
Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ V + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 624 FLASTKDSRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 681
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 682 DAIITKATIEDLLYSE----GYLLFYHKQ 706
>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
Length = 526
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 154/372 (41%), Gaps = 77/372 (20%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 49 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSL 107
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 108 LHSHSGD-VMKPSHIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H K + ++S DIF G RS ++C C+ TS Y+ F ++
Sbjct: 148 ----------SCLQVHRQSKPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDCFLDIP 197
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
L + +V + W+ G Y
Sbjct: 198 LDI---------------------SSAQSVKQALWDTEKSEELCGDNAY----------- 225
Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
C C+++ K + P VL++ RFS+ K+ + +P E LD++ Y+S
Sbjct: 226 ---YCGKCREKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYP-EFLDLKPYLS 281
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
Y L AV H G T+ GHY C + G G+WY DDT V+ D +V
Sbjct: 282 EP---TGGPLPYALYAVLVHDGATSHSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV-- 335
Query: 361 AEAEHGAYILVY 372
AY+L Y
Sbjct: 336 --LNENAYVLFY 345
>gi|302829414|ref|XP_002946274.1| hypothetical protein VOLCADRAFT_44477 [Volvox carteri f.
nagariensis]
gi|300269089|gb|EFJ53269.1| hypothetical protein VOLCADRAFT_44477 [Volvox carteri f.
nagariensis]
Length = 359
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 156/367 (42%), Gaps = 50/367 (13%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK-MMWSS 65
G+ N GNTC++NS+LQ L+ P LN P S+ + A ++ M+ S
Sbjct: 1 GLQNLGNTCFMNSILQSLNAVPELVQQFLN---PPERHWSSKAVVAPAYSGLVRDMITGS 57
Query: 66 GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTS 125
+N A L + + ++ +QQD+QEFL LL AL E + + TY
Sbjct: 58 YGGCVNPSAFLRKISKHDTRWGDGRQQDSQEFLNSLLEALQAECNRITAK---PTYRELQ 114
Query: 126 SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
K + +A +E ++ SV DIF G +S+++C C+R S +E F L++
Sbjct: 115 GKGSEAAQAAEAYEYARSWNDSVVDDIFGGLTQSTIQCHACQRLSHTFEPFLGLAV---- 170
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
+ ++ G ++ +CL F E L
Sbjct: 171 ----------------PIPPAAAASSGSGGDMDAGRGGAGVSVADCLRAFVECEELQGDD 214
Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFS---------SNFTQ--KVTSPIKFPR 290
C+ CK++ K +I R P VL+L KRF+ S F K +P++
Sbjct: 215 SYKCEACKQRQPHSKRMQIFRPPRVLVLTLKRFAQRPAAPGFFSRFRSPAKNNTPVRLEP 274
Query: 291 EGLDMEYYISASGRR---VESRYT----YDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
E LD+ Y + G R V R Y L AVS+H G GHYTA R G+WY
Sbjct: 275 EPLDLTPYCNPLGLRGLCVRGRGPVAPLYQLVAVSHHSGSLE-GGHYTAQARSCLDGQWY 333
Query: 344 LYDDTVV 350
++D+ V
Sbjct: 334 NFNDSCV 340
>gi|149758441|ref|XP_001487991.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51 [Equus
caballus]
Length = 727
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 165/389 (42%), Gaps = 61/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 378 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 436
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 437 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSVGQEANN 493
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 494 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 535
Query: 184 PPGGGTLYECQLRSSVRC-SNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
P T +S R S R V PG +L +CL F E L
Sbjct: 536 PGSYATFGS---QSPERADSTVSRDDHV------------PGIPSLTDCLQWFTRPEHLG 580
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDME 296
++ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 581 SSAKIKCSSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMT 639
Query: 297 YYI-SASGRRVESRY---------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
++ S R+E + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 640 PFLASTKDSRMEGQLPTDCAPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 697
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D V++ + + +E Y+L Y ++
Sbjct: 698 DAVITKATIEDLLYSE----GYLLFYHKQ 722
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 157/374 (41%), Gaps = 81/374 (21%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 83 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSL 141
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 142 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 181
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + S DIF G RS ++C +C+ TS ++ F ++
Sbjct: 182 ----------SCLQVHRQSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVP 231
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL--NKFFNG 238
L + +V + W+ G E L N ++
Sbjct: 232 LDI---------------------SSAQSVNQALWDT--------GKSEELLGENAYY-- 260
Query: 239 ETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYY 298
C C+++ K + P VL+L KRFS+ K+ + +P E LD++ Y
Sbjct: 261 ------CGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYP-EFLDLKPY 313
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+S Y L AV H G T+ GHY C + G G+WY DDT V+ D +V
Sbjct: 314 LS---EPTGGPLPYALYAVLVHDGATSNSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV 369
Query: 359 ESAEAEHGAYILVY 372
AY+L Y
Sbjct: 370 ----LNENAYVLFY 379
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 157/374 (41%), Gaps = 81/374 (21%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 83 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSL 141
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 142 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 181
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + S DIF G RS ++C +C+ TS ++ F ++
Sbjct: 182 ----------SCLQVHRQSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVP 231
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL--NKFFNG 238
L + +V + W+ G E L N ++
Sbjct: 232 LDI---------------------SSAQSVNQALWDT--------GKSEELLGENAYY-- 260
Query: 239 ETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYY 298
C C+++ K + P VL+L KRFS+ K+ + +P E LD++ Y
Sbjct: 261 ------CGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYP-EFLDLKPY 313
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+S Y L AV H G T+ GHY C + G G+WY DDT V+ D +V
Sbjct: 314 LS---EPTGGPLPYALYAVLVHDGATSNSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV 369
Query: 359 ESAEAEHGAYILVY 372
AY+L Y
Sbjct: 370 ----LNENAYVLFY 379
>gi|149040666|gb|EDL94623.1| rCG20407, isoform CRA_a [Rattus norvegicus]
Length = 460
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 121/286 (42%), Gaps = 56/286 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
W + +N + Y F G QQDAQEFL L+ L+ E + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
+G S ++ G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPS--PPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
ST +E+F +LSLP+P G + LR
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLI 268
+C + F E L + C C++++ K +QR P +LI
Sbjct: 418 ---DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILI 460
>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
Length = 505
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 157/374 (41%), Gaps = 81/374 (21%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
PG G+ N GN+CY+N+ LQCL++TP + +L+++ S ++ ++A V
Sbjct: 48 PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSL 106
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
+ SG+ V+ IL T F +QQ+DA EFL++ L ++E
Sbjct: 107 LHSHSGD-VMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 146
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
S +H + S DIF G RS ++C +C+ TS ++ F ++
Sbjct: 147 ----------SCLQVHRQSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVP 196
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECL--NKFFNG 238
L + +V + W+ G E L N ++
Sbjct: 197 LDI---------------------SSAQSVNQALWDT--------GKSEELLGENAYY-- 225
Query: 239 ETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYY 298
C C+++ K + P VL+L KRFS+ K+ + +P E LD++ Y
Sbjct: 226 ------CGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYP-EFLDLKPY 278
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+S Y L AV H G T+ GHY C + G G+WY DDT V+ D +V
Sbjct: 279 LSEP---TGGPLPYALYAVLVHDGATSNSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV 334
Query: 359 ESAEAEHGAYILVY 372
AY+L Y
Sbjct: 335 ----LNENAYVLFY 344
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 162/374 (43%), Gaps = 77/374 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ--LVDALVNFMKMMWS 64
G++N GNTC++NS LQCL+ TP N LL+ + H + + G ++ + N M ++
Sbjct: 123 GLSNLGNTCFLNSALQCLTYTPPLTNYLLSRE---HGRTCAHGSFCMMCTMQNHMIQTFA 179
Query: 65 SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
+ + +I+ L+ + +Q+DA EFL Y + A+ + NG T +
Sbjct: 180 NSGNAIKPLSIIRDLKKISHNLRFGRQEDAHEFLRYTIDAMQKAC------LNGYTKLDR 233
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
QT ++ IF G LRS V+C CK S Y+ + +++L V
Sbjct: 234 -----------------QTQATTLVHQIFGGYLRSRVKCLECKTVSDTYDPYLDVTLEV- 275
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
R +N R E+F + P GG Y
Sbjct: 276 --------------ERAANIVR---ALELFVK---PEQLGGDNAYR-------------- 301
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLDMEYYIS- 300
C C+K+ K + I R VL + KRF SS+ +K+T + +P E LD+ ++S
Sbjct: 302 CSMCRKKVLASKRFTIHRASNVLTISLKRFGSCSSSGGRKITKDVGYP-EFLDIRPFMSE 360
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
G + TY L AV H G + GHY Y + G+WY +D V P + + V +
Sbjct: 361 PKGDPI----TYGLYAVLVHSGYSCNAGHYFCYV-KASNGQWYRMNDHEVHPSNIKVVLN 415
Query: 361 AEAEHGAYILVYQR 374
+ AY+L Y R
Sbjct: 416 QQ----AYVLFYLR 425
>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
Length = 486
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 164/397 (41%), Gaps = 96/397 (24%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR+ +L KSQ + ++L+ + ++ S
Sbjct: 157 GLVNFGNTCYCNSVLQALYFCRPFRDKVLA--------YKSQPRKKESLLTCLADLFHSI 208
Query: 67 NL------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQY 116
V+ K + LR + FD QQDA EFL YLL L EE K ++
Sbjct: 209 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERK--QEKQ 266
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
NG + + S T + + +IF G L + RC C+ S+ E F
Sbjct: 267 NGRLPNGNIDSENNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDF 315
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+LS+ V + TS + CL F
Sbjct: 316 LDLSVDVE--------------------QNTSITH-------------------CLRGFS 336
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIK 287
N ETL + C+ C+ + + K ++++LP +L L KRF +T K++ +
Sbjct: 337 NTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVV 395
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP L++ + + SG YDL AV H G GHY A + W L+DD
Sbjct: 396 FP---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDD 449
Query: 348 TVVSPVDAQTVE---------SAEAEHGAYILVYQRR 375
+V +DAQ +E S +E G YIL YQ R
Sbjct: 450 DIVEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 485
>gi|328711432|ref|XP_003244535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Acyrthosiphon pisum]
Length = 571
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 171/401 (42%), Gaps = 84/401 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLL----------NEDIPIHPDSKSQG------- 49
GI N+GN C++++V Q L + F + N+ +PD + Q
Sbjct: 216 GILNSGNNCFMSAVWQSLRHLKPFITCMKLFKLVEIEASNKKHNSNPDPRLQDCIAQEMW 275
Query: 50 QLVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALN--- 106
+L++ LV++ K ++ A+ + ++ G Q DA EFL++ L L+
Sbjct: 276 KLMETLVDWQKPPGYKFREAISPAALQQIVCKIKPRYKGYHQHDAHEFLMFTLDTLHNEL 335
Query: 107 --EEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
E++K++ ++ G T+ N S ++ S +F G L S V C
Sbjct: 336 TREKSKLLLEE--GITHHNPSKID------------------TLVSLMFRGFLLSEVYCL 375
Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
C + F ++SL VP YE + S +S PV
Sbjct: 376 KCNTPYRKRDEFTDISLDVPD-----YEDEDPS-------------------VSRPV--- 408
Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNF 278
L +CL ++F E L+ C+ C+K K + + +P +L L KRF S +
Sbjct: 409 -DLLSDCLERYFEIEELNERNFYFCEKCEKPQKSTKRFWMNAVPNILCLHLKRFRWDSTY 467
Query: 279 TQKVTSPIKFPREGLDMEYYISASGRRVE----SRYTYDLCAVSNHIGKTALYGHYTAYC 334
KV + I+FP + LDM Y ++ + +DL AV H G+ GHYT+Y
Sbjct: 468 RTKVHTFIQFPMQSLDMSPYYDDEMKKTQFVGKDTNMFDLVAVVVHDGEGVGSGHYTSYA 527
Query: 335 RREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
G+WY Y+D V VDA VE+ + AY+L Y +R
Sbjct: 528 VDSTEGQWYEYNDEKVHEVDASFVENVQ----AYLLFYIKR 564
>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
Length = 370
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 160/391 (40%), Gaps = 83/391 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
V+ K + LR + FD QQDA EFL YLL + A ++ ++
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI---ADILQEE-------RK 145
Query: 125 SSKQVGSFR--ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
KQ G R + + T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 146 QEKQNGRLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVD 205
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
V + TS + CL F N ETL
Sbjct: 206 VE--------------------QNTSITH-------------------CLRGFSNTETLC 226
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREGL 293
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP L
Sbjct: 227 SEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYT-KLSYRVVFP---L 282
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
++ + + SG YDL AV H G GHY A + W L+DD +V +
Sbjct: 283 ELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEKI 339
Query: 354 DAQTVE---------SAEAEHGAYILVYQRR 375
DAQ +E S +E G YIL YQ R
Sbjct: 340 DAQAIEEFYGLTSDISKNSESG-YILFYQSR 369
>gi|90399346|emb|CAH68425.1| H0811D08.10 [Oryza sativa Indica Group]
Length = 562
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 170/414 (41%), Gaps = 92/414 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE---------DIPIHPDSKSQGQLVDA 54
GL G+ N GNTC++NSVLQ L + P RN L + P+ S
Sbjct: 180 GLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAAC 239
Query: 55 LVNFMKMMWS---SGNLVLNTKA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
L + ++S SG + A L + + +QQDA EF + +L ++E K
Sbjct: 240 LACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIK 299
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
DQ+ + + + +F G LRS V C++C TS
Sbjct: 300 --DDQHKSHAQGH--------------------GDCCIAHRVFSGILRSDVTCTHCGFTS 337
Query: 171 TVYEIFWELSLPVPPG-GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---- 225
T +E ++SL + G +L + VR N +R+S GG
Sbjct: 338 TTFEPCMDISLDLDAGYNNSLGVANPKVHVR--NGERSS---------------GGTNTK 380
Query: 226 -GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--- 277
TL CL +F E L C+ CK++ + +K I+RLP V KRF +
Sbjct: 381 VSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEHSSVK 440
Query: 278 -FTQKVTSPIKFPREGLDMEYYISAS------GRRV------------ESRYTYDLCAVS 318
++KV ++FP LDM Y+S+S G R+ E +++ AV
Sbjct: 441 KMSRKVDHCLQFP-FSLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEFSSEFEIFAVI 499
Query: 319 NHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
H GK GHY Y R WY DD V+ V+ TV +++ AY+L Y
Sbjct: 500 MHSGKLEA-GHYVTYLRL--NNHWYKCDDAWVTRVEEHTVRTSQ----AYMLFY 546
>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
Length = 355
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 160/391 (40%), Gaps = 83/391 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 80
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
V+ K + LR + FD QQDA EFL YLL + A ++ ++
Sbjct: 81 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI---ADILQEE-------RK 130
Query: 125 SSKQVGSFR--ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
KQ G R + + T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 131 QEKQNGRLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVD 190
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
V + TS + CL F N ETL
Sbjct: 191 VE--------------------QNTSITH-------------------CLRGFSNTETLC 211
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREGL 293
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP L
Sbjct: 212 SEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYT-KLSYRVVFP---L 267
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
++ + + SG YDL AV H G GHY A + W L+DD +V +
Sbjct: 268 ELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEKI 324
Query: 354 DAQTVE---------SAEAEHGAYILVYQRR 375
DAQ +E S +E G YIL YQ R
Sbjct: 325 DAQAIEEFYGLTSDISKNSESG-YILFYQSR 354
>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
Full=Deubiquitinating enzyme 12A; AltName:
Full=Ubiquitin thioesterase 12A; AltName:
Full=Ubiquitin-specific-processing protease 12A
gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
Length = 371
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 159/395 (40%), Gaps = 90/395 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKIL----AYRSQPRRKENLLTCLADLFHSIANQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K D+ NG
Sbjct: 96 RKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERK--QDKQNGKL 153
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASV--FSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+ T Q + +T S +IF G L + RC C+ S+ E F +
Sbjct: 154 ANGTLDSQNNN-----------STPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLD 202
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LS+ V + TS + CL F N
Sbjct: 203 LSVDVE--------------------QNTSITH-------------------CLRGFSNT 223
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFP 289
ETL + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 224 ETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYT-KLSYRVVFP 282
Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
L++ + + SG YDL AV H G GHY A + W L+DD +
Sbjct: 283 ---LELRLF-NTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDI 336
Query: 350 VSPVDAQTVE---------SAEAEHGAYILVYQRR 375
V +DAQ +E S +E G YIL YQ R
Sbjct: 337 VEKIDAQAIEEFYGLTSEISKNSESG-YILFYQSR 370
>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
Length = 355
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 160/391 (40%), Gaps = 83/391 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 80
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
V+ K + LR + FD QQDA EFL YLL + A ++ ++
Sbjct: 81 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI---ADILQEE-------RK 130
Query: 125 SSKQVGSFR--ALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
KQ G R + + T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 131 QEKQNGRLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVD 190
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
V + TS + CL F N ETL
Sbjct: 191 VE--------------------QNTSITH-------------------CLRGFSNTETLC 211
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREGL 293
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP L
Sbjct: 212 SEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYT-KLSYRVVFP---L 267
Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
++ + + SG YDL AV H G GHY A + W L+DD +V +
Sbjct: 268 ELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEKI 324
Query: 354 DAQTVE---------SAEAEHGAYILVYQRR 375
DAQ +E S +E G YIL YQ R
Sbjct: 325 DAQAIEEFYGLTSDISKNSESG-YILFYQSR 354
>gi|385303118|gb|EIF47212.1| ubiquitin carboxyl-terminal hydrolase [Dekkera bruxellensis AWRI1499]
Length = 1196
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 83/156 (53%), Gaps = 15/156 (9%)
Query: 227 TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
TL +CL F E L C +C+K K EI +P VL + KRF S+ F+
Sbjct: 1003 TLDDCLQLFSRPEILGENDLWYCPHCQKHQQATKKIEIWSVPDVLAIHLKRFESSRSFSD 1062
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K+ + ++FP EGLDM Y+++ + YDLCAV NH G GHYTAY R G
Sbjct: 1063 KIDATVEFPIEGLDMSKYVAS--EKTHQAMVYDLCAVDNHFGGIG-GGHYTAYVRNFVDG 1119
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHG-AYILVYQRR 375
WY YDD+ VSP D +A G AY+L Y+RR
Sbjct: 1120 EWYYYDDSRVSPADP-----LDAIRGSAYLLFYRRR 1150
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTP--------AFRNVLLNEDIPIHPDSKSQGQLVDAL 55
G G+ N GNTCY+NS LQC+++ P F +N + P+ +G+L +A
Sbjct: 338 GKVGLVNLGNTCYMNSALQCIAHVPELTYYFLYGFYKKEINRENPL----GKKGKLAEAY 393
Query: 56 VNFMKMMWSSGNL---------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALN 106
+ ++ ++ L + + + + F +QQD+QEFL +LL L+
Sbjct: 394 ASLIRHLFDKRMLNNXGSGYRESFSPRDFRYTIGVFNSMFSDYRQQDSQEFLTFLLDGLH 453
Query: 107 EEAKVVPDQYNGSTYSNTSSKQVGSFR--------ALHYWEKFQTTEASVFSDIFVGQLR 158
E+ V + Y G F A W + SV D+FVGQ +
Sbjct: 454 EDLNRVLKK----PYIEKPELPEGKFENKEEVCKLADDCWIAHKRRNDSVIIDLFVGQYK 509
Query: 159 SSVRCSNCKRTSTVYEIFWELSLPVP 184
S++ C C+ S ++ + +L+LP+P
Sbjct: 510 STLICPECQHXSLTFDPYNDLTLPLP 535
>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 159/393 (40%), Gaps = 85/393 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKIL----AYRSQPRRKENLLTCLADLFHSIANQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K D+ NG
Sbjct: 96 RKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERK--QDKTNGRL 153
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ + Q + A ++ +IF G L + RC C+ S+ E F +LS
Sbjct: 154 ANGSLDSQNNNSNA--------PPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 205
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 206 VDVE--------------------QNTSITH-------------------CLRGFSNTET 226
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 227 LCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYT-KLSYRVVFP-- 283
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 284 -LELRLF-NTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVE 339
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 340 KIDAQAIEEFYGLTSEISKNSESG-YILFYQSR 371
>gi|145548391|ref|XP_001459876.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427703|emb|CAK92479.1| unnamed protein product [Paramecium tetraurelia]
Length = 571
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 171/375 (45%), Gaps = 79/375 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ-LVDALVNFMKMMWSS 65
G+ N CY+NS LQ L + + +L + P QGQ + A ++ + S
Sbjct: 268 GLRNPRYYCYLNSALQVLLSIDSLSEGIL----AVQP---KQGQKYLVAYQELLRTIKRS 320
Query: 66 GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTS 125
G+ + A + + KF NQQQD+ EFLL+ L + EE
Sbjct: 321 GSF--SAIAAQSVWENCSGKFQFNQQQDSHEFLLFFLGKIQEEL---------------- 362
Query: 126 SKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
VG ++ ++F + E + +SD TS Y+I
Sbjct: 363 ---VGKYKNK---QEFNSAEQA-WSDY----------------TSKNYDIV--------- 390
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG--GGTLYECLNKFFNGETLHN 243
T++ Q S C +C + Y+ W+LSLP+ G L +CL ++ E +++
Sbjct: 391 --DTIFAGQSTSQSFCKSCNQVCEGYDPIWDLSLPISKSYTGVDLMDCLKSYYREEVIND 448
Query: 244 T--CQYCKKQSDLVKLYE-IQRLPPVLILWFKRFSSNFT-QKVTSPIKFPREGLDMEYYI 299
T C CKK + VK I + P LI+ FKRF++ T QK+ I +P E LD++ +
Sbjct: 449 TWKCDKCKKTNKSVKRRMFISQTPKYLIIQFKRFTTFPTSQKINDSISYP-EKLDIQEFC 507
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
S + ++++Y L A+ H+G + GHY AY R WYL+DD VS ++ + +
Sbjct: 508 S---KGLQTKYK--LKALITHMG-SINGGHYKAYAER--YDNWYLFDDETVSKINGKQL- 558
Query: 360 SAEAEHGAYILVYQR 374
++ AY+L+YQ+
Sbjct: 559 ---SDRSAYVLLYQK 570
>gi|427795287|gb|JAA63095.1| Putative ubiquitin c-terminal hydrolase posttranslational
modification, partial [Rhipicephalus pulchellus]
Length = 929
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 16/192 (8%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVL--------LNEDIPIHPDSKSQGQLVD 53
+PGL G+ N GNTC++NS LQC+SNTP LN+ P+ +G++
Sbjct: 286 TPGLCGLGNIGNTCFMNSALQCMSNTPPLTEYFVTDRYLSELNDSNPL----GMRGEIAK 341
Query: 54 ALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVV 112
+ + +K+MWS + + +A+ + +F G QQQD QE + +LL L+E+ +V+
Sbjct: 342 SYADLIKVMWSGNCSSVIPRPFKMAVGRFAPQFSGFQQQDCQELMAFLLDGLHEDLNRVI 401
Query: 113 PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTV 172
Y S+ +V + A W + S+ DIF G L+S++ C +C + S
Sbjct: 402 NKPYIELKDSDGRPDEVVAQEA---WHNYLLRNNSIIVDIFHGLLKSTLVCPDCHKLSVT 458
Query: 173 YEIFWELSLPVP 184
++ F LSLP+P
Sbjct: 459 FDPFCYLSLPLP 470
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
L ECL F E L C C+ K +++ LP VLI+ KRFS N + K
Sbjct: 749 LRECLELFTTTEKLGAEDPWYCPTCRSHKQATKKFDLWSLPRVLIIHLKRFSYNRFWRDK 808
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + + FP L M+ YI R R YDL AV+NH G GHYTAY + + T +
Sbjct: 809 IDTHVDFPITDLCMDDYII---NRKHERAVYDLIAVANHYGGMGA-GHYTAYAKNKETHK 864
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
WY +DD+ VS V S AY+L Y RR
Sbjct: 865 WYHFDDSSVSSATEDNVVSK----AAYVLFYMRR 894
>gi|321460368|gb|EFX71411.1| hypothetical protein DAPPUDRAFT_308900 [Daphnia pulex]
Length = 869
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALV 56
+ PG G+ N GNTC++NSVLQC+SNTP + L E ++ +QG++ A
Sbjct: 245 VQPGRCGLNNLGNTCFMNSVLQCMSNTPPIQRYFLEERHWAELNKENPLGNQGEIAKAFA 304
Query: 57 NFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQ 115
+ +K MWS + +A L + + +F G QQ D+QE L +LL L+E+ +++
Sbjct: 305 DLLKAMWSGQHHSFPPRAFKLQVGRFAPQFSGYQQHDSQELLTFLLDGLHEDLNRILKKP 364
Query: 116 Y-NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYE 174
Y S ++V A WE ++ SV D+F G L+S++ C C + S ++
Sbjct: 365 YIELKDADGRSDEEV----AREGWENYRKRNDSVIVDLFHGLLKSTLVCPECNKVSVTFD 420
Query: 175 IFWELSLPVP 184
LSLP+P
Sbjct: 421 PTCYLSLPMP 430
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQK 281
L ECL F + E L C CKK K +++ LP VL++ KRFS + K
Sbjct: 682 LKECLEVFTSIERLGADDAWYCPSCKKHVRATKKFDLWSLPEVLVIHLKRFSYTRSLRDK 741
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+ + ++FP GL+M YI YDL V NH G GHYTAY + + G
Sbjct: 742 LDTLVEFPTRGLNMAPYIIDPN---PMDAVYDLIGVCNHYGGLG-GGHYTAYAKNKDDGS 797
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
WY +DD+ V +++ E + AY+L Y RR
Sbjct: 798 WYYFDDSSV----SESSEDSVCSKAAYVLFYIRR 827
>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 159/393 (40%), Gaps = 85/393 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKIL----AYRSQPRRKENLLTCLADLFHSIANQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K D+ NG
Sbjct: 96 RKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERK--QDKTNGRL 153
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ + Q + A ++ +IF G L + RC C+ S+ E F +LS
Sbjct: 154 ANGSLDSQNHNSNA--------PPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 205
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 206 VDVE--------------------QNTSITH-------------------CLRGFSNTET 226
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K +++LP +L L KRF +T K++ + FP
Sbjct: 227 LCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYT-KLSYRVVFP-- 283
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 284 -LELRLF-NTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVE 339
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 340 KIDAQAIEEFYGLTSEISKNSESG-YILFYQSR 371
>gi|159476906|ref|XP_001696552.1| hypothetical protein CHLREDRAFT_98041 [Chlamydomonas reinhardtii]
gi|158282777|gb|EDP08529.1| predicted protein [Chlamydomonas reinhardtii]
Length = 329
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 150/372 (40%), Gaps = 61/372 (16%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G++N GNTC++NS+LQ L+ P HP + S+ + A ++ M
Sbjct: 1 GLSNLGNTCFMNSILQSLNAVPELAAAF------YHPPERIWSSKAVVAPAYSGLVRDMI 54
Query: 64 SSGNL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
S G+L V+N L + ++ +QQD+QEFL LL AL E + + Y
Sbjct: 55 S-GSLGSVVNPSGFLRKVSKQDSRWGDGRQQDSQEFLNSLLEALQSECNRITSK---PVY 110
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
K +A + +T S+ D F G +S+++C CKRTS +E F L++
Sbjct: 111 KELQGKGSEEVQAAEAYVYARTWNDSIVDDTFGGLTQSTLQCLACKRTSHTFEPFLGLAV 170
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
P+P G + +C L + C GE
Sbjct: 171 PIPQAAGAVADC-LSAFTECEQ--------------------------------LEGEDS 197
Query: 242 HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISA 301
+ C+ CK+ K +I R P VL+L KRF+ T + S
Sbjct: 198 YK-CEACKRCQPHAKRMQIFRPPRVLVLTLKRFAQRGGGHGTP--------GGYGGFFSR 248
Query: 302 SGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESA 361
S+ L AVS+H G GHYTA R G+WY ++D S V +
Sbjct: 249 LRGGGTSKNNTALIAVSHHSGSLE-GGHYTAQARSCLDGQWYNFND---SHVRQEAGRPG 304
Query: 362 EAEHGAYILVYQ 373
A AY+L Y+
Sbjct: 305 GASSSAYVLFYR 316
>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
harrisii]
Length = 599
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 158/392 (40%), Gaps = 85/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 269 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 324
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 325 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 384
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N S+ S T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 385 GNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 433
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 434 DVE--------------------QNTSITH-------------------CLRGFSNTETL 454
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 455 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 510
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 511 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEK 567
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 568 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 598
>gi|440302636|gb|ELP94943.1| hypothetical protein EIN_250370 [Entamoeba invadens IP1]
Length = 333
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 159/377 (42%), Gaps = 68/377 (18%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ----LVDALVNFM 59
G G+ N GNTCY+NSVLQCLS+T L +P + Q + ++++ +
Sbjct: 14 GATGLMNLGNTCYLNSVLQCLSHTEYLTEFALQYKLPYYIKGDQQRHYTESVAESMIQVI 73
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
+ ++S+ + ++ K L+ R+Y K F +Q+DA EFL+ L+ ++ + +
Sbjct: 74 QQIYSAQS-TISPKEFLITFRAYNKSFCNGEQKDAAEFLMLLITKVDSDLR-------NQ 125
Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
TYS V S + + + S+ + I G + + + CS CK ++ E F +
Sbjct: 126 TYS-VPPPSVISADYVQSFVDYSLKNRSIITQIMGGMIHTHLECSFCKASNDFSEPFTII 184
Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGE 239
LP+ T +NCK TLY+CL F
Sbjct: 185 QLPIQIMFST------------NNCKMPYI-----------------TLYDCLESFMQSS 215
Query: 240 TLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C K + + PP+L+ RF + ++K T+ + +P L
Sbjct: 216 ---HVCSVCFKLQTPYRTFV--ATPPILVFQLLRFKQTEKGSEKDTTRVFYPLRDL---- 266
Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
V S Y+L + H GK GHYTA C G W+ ++D V ++
Sbjct: 267 --------VVSGVKYELYSQIIHYGKIN-SGHYTANCVIN--GEWFAFNDGSVDKIENAN 315
Query: 358 VESAEAEHGAYILVYQR 374
V ++ AY+L Y+R
Sbjct: 316 VMNS----SAYLLFYKR 328
>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
[Oryctolagus cuniculus]
Length = 475
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 162/396 (40%), Gaps = 93/396 (23%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L KSQ + ++L+ + ++ S
Sbjct: 145 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--------YKSQPRKKESLLTCLADLFHSI 196
Query: 67 NL------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYN 117
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 197 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 256
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
N S+ S T + + +IF G L + RC C+ S+ E F
Sbjct: 257 RLPNGNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFL 305
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LS+ V + TS + CL F N
Sbjct: 306 DLSVDVE--------------------QNTSITH-------------------CLRGFSN 326
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKF 288
ETL + C+ C+ + + K ++++LP +L L KRF +T K++ + F
Sbjct: 327 TETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVF 385
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P L++ + + SG YDL AV H G GHY A + W L+DD
Sbjct: 386 P---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDD 439
Query: 349 VVSPVDAQTVE---------SAEAEHGAYILVYQRR 375
+V +DAQ +E S +E G YIL YQ R
Sbjct: 440 IVEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 474
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 154/374 (41%), Gaps = 75/374 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GN+C+ N VLQCL+ T LL + L + + + S+
Sbjct: 182 GLLNCGNSCFANVVLQCLTYTRPLVAYLLEKGHQTECKHNDWCFLCEFQSHVERASQSA- 240
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
L + IL LR+ +Q+DA EF+ + A++ V D++ G +S
Sbjct: 241 -LPFSPMNILSRLRNIGGNLGYGRQEDAHEFMRF---AIDTMQSVCLDEFGGEKAVEPAS 296
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
+ E ++ IF G+L+S V
Sbjct: 297 Q-----------------ETTIIQHIFGGRLQSQVI------------------------ 315
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQ 246
C+ C + S +E +L++ + +L ECLN+F + E LH
Sbjct: 316 --------------CTKCNKISNQFENMMDLTVEIHGDAESLEECLNQFTDKEWLHGENM 361
Query: 247 Y-CKKQSDLVKLYE---IQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISAS 302
Y C +D VK ++ IQR P VL + KRF S K+ + FP E LD+ Y+S
Sbjct: 362 YKCDGCNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFP-ETLDLSPYMSEK 420
Query: 303 GRRVESRYTYDLCAVSNHIG--KTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
G + Y L AV H+ + +GHY Y ++ G W+ DD+ VS V+ V S
Sbjct: 421 GDGAD---VYKLYAVVVHVDMLNASFFGHYICY-TKDFHGNWHRIDDSKVSSVELDEVLS 476
Query: 361 AEAEHGAYILVYQR 374
GAY+L+Y R
Sbjct: 477 ----QGAYMLLYSR 486
>gi|414585137|tpg|DAA35708.1| TPA: hypothetical protein ZEAMMB73_275507 [Zea mays]
Length = 563
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 163/408 (39%), Gaps = 81/408 (19%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE---------DIPIH---PDSKSQGQL 51
GL G+ N GNTC++NSVLQ L + P RN L + P+ D+ L
Sbjct: 182 GLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRASDADRVACL 241
Query: 52 VDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKV 111
L +S + L + + +QQDA EF + +L ++E
Sbjct: 242 ACDLDEIYSAAFSGDRTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHE---- 297
Query: 112 VPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTST 171
N Q S+ H + + +F G LRS V C++C TST
Sbjct: 298 -----------NIKDDQQKSYAQGH-------GDCCIAHRVFSGILRSDVTCTSCGFTST 339
Query: 172 VYEIFWELSLPVPPGGGTLYE-CQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
+E ++SL + G + + +S VR ++ TL
Sbjct: 340 TFEPCMDISLDMDAGDNSSFGVANTKSHVRNGERGLAGVNSKVL------------TLMR 387
Query: 231 CLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPI 286
CL +F E L C++C ++ + +K I+RLP V KRF + +KV+ +
Sbjct: 388 CLERFTRSERLDAEQKFFCEHCNERQESLKQMSIRRLPLVSCFHIKRFEHSSVKKVSRKV 447
Query: 287 ----KFPREGLDMEYYISAS------GRRV------------ESRYTYDLCAVSNHIGKT 324
+FP LDM Y+S+S G R+ E +++ AV H GK
Sbjct: 448 DHCLQFP-FSLDMAPYLSSSILRSRYGNRIFPAEASDADAVSEVSSEFEIFAVITHSGKL 506
Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
GHY Y R WY DD V+ V+ TV +++ AY+L Y
Sbjct: 507 EA-GHYVTYLRL--NNHWYKCDDAWVTRVEEHTVRTSQ----AYMLFY 547
>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
africana]
Length = 368
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 158/392 (40%), Gaps = 85/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 38 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 93
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 94 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 153
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N S+ S T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 154 GNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 202
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 203 DVE--------------------QNTSITH-------------------CLRGFSNTETL 223
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 224 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 279
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 280 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEK 336
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 337 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 367
>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
domestica]
Length = 376
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 158/392 (40%), Gaps = 85/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 46 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 101
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 102 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 161
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N S+ S T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 162 GNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 210
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 211 DVE--------------------QNTSITH-------------------CLRGFSNTETL 231
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 232 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 287
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 288 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEK 344
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 345 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 375
>gi|351697007|gb|EHA99925.1| Ubiquitin carboxyl-terminal hydrolase 20 [Heterocephalus glaber]
Length = 856
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 121/259 (46%), Gaps = 46/259 (17%)
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
GS+Y ++ GS R + + SV SDIF G + S V+C C R ST E F
Sbjct: 447 GSSYVLKKAQASGSRR------RKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQ 500
Query: 178 ELSLPVP-------------------PGG-GTLYECQLRSSVRCSNCKR--TSTVYEIFW 215
+LSLP+P PG G Y Q + +R S FW
Sbjct: 501 DLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYTAQGWLAFIVEYIRRFVISCTPSWFW 560
Query: 216 ELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWF 271
PV TL +CL FF + L +C+ CKK + VK ++ RLP +L +
Sbjct: 561 G---PVV----TLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHL 613
Query: 272 KRFSSNFTQ--KVTSPIKFPREGLDMEYYISASGRRVESRYT-YDLCAVSNHIGKTALYG 328
KRF T KV+S + FP EGLD+ +++ + S+ T YDL +V H G TA G
Sbjct: 614 KRFRHEVTYSFKVSSHVSFPLEGLDLRPFLA---KECASQITTYDLLSVICHHG-TAGSG 669
Query: 329 HYTAYCRREGTGRWYLYDD 347
HY AYC+ G+WY +DD
Sbjct: 670 HYIAYCQNVINGQWYEFDD 688
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 53/147 (36%), Gaps = 43/147 (29%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GN+CY+N+ LQ LSN P L + D K L + + +W
Sbjct: 137 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 194
Query: 64 SS------------GNLVLNTKAILLALRSYTK--------------------------- 84
G LV K L +SY K
Sbjct: 195 HKKRPPLTQFFLECGGLVRTDKKPALC-KSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVN 253
Query: 85 -KFDGNQQQDAQEFLLYLLAALNEEAK 110
F G QQD QEFL L+ L+EE K
Sbjct: 254 PMFRGYAQQDTQEFLRCLMDQLHEELK 280
>gi|297603462|ref|NP_001054070.2| Os04g0647300 [Oryza sativa Japonica Group]
gi|255675832|dbj|BAF15984.2| Os04g0647300, partial [Oryza sativa Japonica Group]
Length = 591
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 165/413 (39%), Gaps = 90/413 (21%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE---------DIPIHPDSKSQGQLVDA 54
GL G+ N GNTC++NSVLQ L + P RN L + P+ S
Sbjct: 209 GLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAAC 268
Query: 55 LVNFMKMMWS---SGNLVLNTKA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
L + ++S SG + A L + + +QQDA EF + +L ++E K
Sbjct: 269 LACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIK 328
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
DQ+ + + + +F G LRS V C++C TS
Sbjct: 329 --DDQHKSLAQGH--------------------GDCCIAHRVFSGILRSDVTCTHCGFTS 366
Query: 171 TVYEIFWELSLPVPPG-----GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG 225
T +E ++SL + G G + +R+ R S T
Sbjct: 367 TTFEPCMDISLDLDAGYNNSLGVANPKVHVRNGERSSGGTNTKV---------------- 410
Query: 226 GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS----SN 277
TL CL +F E L C+ CK++ + +K I+RLP V KRF
Sbjct: 411 STLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEHSSVKK 470
Query: 278 FTQKVTSPIKFPREGLDMEYYISAS------GRRV------------ESRYTYDLCAVSN 319
++KV ++FP LDM Y+S+S G R+ E +++ AV
Sbjct: 471 MSRKVDHCLQFP-FSLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEFSSEFEIFAVIM 529
Query: 320 HIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
H GK GHY Y R WY DD V+ V+ TV +++ AY+L Y
Sbjct: 530 HSGKLEA-GHYVTYLR--LNNHWYKCDDAWVTRVEEHTVRTSQ----AYMLFY 575
>gi|444520452|gb|ELV13004.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Tupaia
chinensis]
Length = 442
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 146/364 (40%), Gaps = 74/364 (20%)
Query: 12 GNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSGNLVLN 71
GNTCY+N+ LQCL+ TP N +L+++ H + + + W ++ +
Sbjct: 2 GNTCYMNAALQCLTYTPPIANYMLSQE---HSQTCHHQGFCMLCIMQAHITW----VLQH 54
Query: 72 TKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGS 131
+I+ + F N+Q+DA EFL++ L A+ E + +G + + S+
Sbjct: 55 PGSIIQPSYALAASFHRNEQEDAHEFLMFTLEAMQEAS------LSGQKHFDHPSEDSTL 108
Query: 132 FRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 191
RA IF G RS ++C +C S ++ + ++SL +
Sbjct: 109 IRA-----------------IFGGYWRSQIKCLHCHSVSDTFDPYLDISLDI-------- 143
Query: 192 ECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQYCKKQ 251
K +V + EL P G Y C C ++
Sbjct: 144 -------------KTAQSVSQALEELVKPEELDGENAYH--------------CSVCLER 176
Query: 252 SDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYT 311
K + VLIL KRFS +K T +++P E LDM+ Y S R
Sbjct: 177 RLASKTLTLHASSKVLILVLKRFSDFTGEKTTKAVQYP-ECLDMQTYTSEQNR---GPLI 232
Query: 312 YDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILV 371
Y L AV H G + GHY Y + G G+WY DD V+ D V S AY+L
Sbjct: 233 YGLYAVLVHAGSSCHNGHYFCYI-KAGNGQWYKMDDAEVTACDVTVVLSQP----AYVLF 287
Query: 372 YQRR 375
Y ++
Sbjct: 288 YVQK 291
>gi|224066024|ref|XP_002192515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Taeniopygia
guttata]
Length = 904
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 6/186 (3%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNF 58
PGL G++N GNTC++NS LQCLSNTP + L + + + +G++ +A +
Sbjct: 264 PGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYADL 323
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
+K MWS + + + + +F G QQQD+QE L +LL L+E+ V +
Sbjct: 324 IKQMWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRV--KKKP 381
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
++ + S A WE + S+ DIF G +S++ C C + S ++ F
Sbjct: 382 YLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCY 441
Query: 179 LSLPVP 184
L+LP+P
Sbjct: 442 LTLPLP 447
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 227 TLYECLNKFFNGETL--HNT--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
L +C+ F ETL H+ C CKK K +++ LP +L++ KRFS + +
Sbjct: 737 ALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFSYSRYWRD 796
Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
K+ + ++FP GL+M ++ R S Y YDL AVSNH G + GHYTAY + +
Sbjct: 797 KLDTVVEFPIRGLNMSEFVCDP--RAGS-YVYDLIAVSNHYGAMGV-GHYTAYAKNKVNN 852
Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+WY +DD+ VS + AY+L Y+RR
Sbjct: 853 KWYYFDDSSVSVASEDQI----VTKAAYVLFYERR 883
>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
Length = 369
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 163/397 (41%), Gaps = 96/397 (24%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L KSQ + ++L+ + ++ S
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--------YKSQPRKKESLLTCLADLFHSI 91
Query: 67 NL------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQY 116
V+ K + LR + FD QQDA EFL YLL L EE K ++
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERK--QEKQ 149
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
NG + + S T + + +IF G L + RC C+ S+ E F
Sbjct: 150 NGRLPNGNIDSENNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDF 198
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+LS+ V + TS + CL F
Sbjct: 199 LDLSVDVE--------------------QNTSITH-------------------CLRGFS 219
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIK 287
N ETL + C+ C+ + + K ++++LP +L L KRF +T K++ +
Sbjct: 220 NTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVV 278
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP L++ + + SG YDL AV H G GHY A + W L+DD
Sbjct: 279 FP---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDD 332
Query: 348 TVVSPVDAQTVE---------SAEAEHGAYILVYQRR 375
+V +DAQ +E S +E G YIL YQ R
Sbjct: 333 DIVEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 368
>gi|125591848|gb|EAZ32198.1| hypothetical protein OsJ_16406 [Oryza sativa Japonica Group]
Length = 562
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 170/414 (41%), Gaps = 92/414 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE---------DIPIHPDSKSQGQLVDA 54
GL G+ N GNTC++NSVLQ L + P RN L + P+ S
Sbjct: 180 GLRGLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEANDKAAC 239
Query: 55 LVNFMKMMWS---SGNLVLNTKA-ILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
L + ++S SG + A L + + +QQDA EF + +L ++E K
Sbjct: 240 LACDLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIK 299
Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
DQ+ + + + +F G LRS V C++C TS
Sbjct: 300 --DDQHKSLAQGH--------------------GDCCIAHRVFSGILRSDVTCTHCGFTS 337
Query: 171 TVYEIFWELSLPVPPG-GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---- 225
T +E ++SL + G +L + VR N +R+S GG
Sbjct: 338 TTFEPCMDISLDLDAGYNNSLGVANPKVHVR--NGERSS---------------GGTNTK 380
Query: 226 -GTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--- 277
TL CL +F E L C+ CK++ + +K I+RLP V KRF +
Sbjct: 381 VSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRRLPLVSCFHIKRFEHSSVK 440
Query: 278 -FTQKVTSPIKFPREGLDMEYYISAS------GRRV------------ESRYTYDLCAVS 318
++KV ++FP LDM Y+S+S G R+ E +++ AV
Sbjct: 441 KMSRKVDHCLQFP-FSLDMAPYLSSSILRSRFGNRIFPSEASDADSVSEFSSEFEIFAVI 499
Query: 319 NHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
H GK GHY Y R WY DD V+ V+ TV +++ AY+L Y
Sbjct: 500 MHSGKLEA-GHYVTYLRL--NNHWYKCDDAWVTRVEEHTVRTSQ----AYMLFY 546
>gi|403364554|gb|EJY82041.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1072
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 127/294 (43%), Gaps = 50/294 (17%)
Query: 90 QQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQV-GSFRALHYWEKFQTTEASV 148
Q Q QE + L+ L +P+ N + KQ A+ W+ + SV
Sbjct: 382 QNQVNQEPQVNKLSILPRRNARIPEPSNDGDKMVLAPKQKQDEEEAMESWKNYLQKNKSV 441
Query: 149 FSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTS 208
D+F GQL+S++ C C ST ++ LS+P+ S+ R N
Sbjct: 442 IVDLFQGQLKSTLSCLVCGHKSTKFDCLMYLSVPI-------------SAQRDPNT---- 484
Query: 209 TVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLP 264
P+ +L +CL F ETL N C+ CKK K +I +LP
Sbjct: 485 -----------PI-----SLQDCLQDFSKQETLDNQNKWYCEQCKKHQPATKKIDIWKLP 528
Query: 265 PVLILWFKRFS---SNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHI 321
+LI+ KRF N K+ + FP LD+ YIS+ R + YDL +V+NH
Sbjct: 529 SILIICLKRFKFLGRNKYLKINEQVSFPMNNLDLSPYISSPQRE---KPIYDLFSVANHE 585
Query: 322 GKTALYGHYTAYCRREGTGRWYLYDDTVVSPV-DAQTVESAEAEHGAYILVYQR 374
G T GHY AY + WY ++D + + + Q ++S E AYIL Y +
Sbjct: 586 G-TMTQGHYYAYTWNHASRNWYYFNDHEIKLIKNLQKIQSPE----AYILFYSK 634
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 4 GLNGIANAGNTCYINSVLQCLSN----TPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFM 59
GL G+ N GNTC+IN+ +QCLS T F + L E+I +G++ A +
Sbjct: 231 GLVGLYNLGNTCFINTAIQCLSACQPLTDYFNSNLHYEEINEVNPMGYKGEVSRAFGKLV 290
Query: 60 KMMWSSGNLVLNTKAILLALR------SYTKKFDGNQQQDAQEFLLYLLAALNEE 108
K+MW N+ + +R + F QQD QEF+ YLL L+E+
Sbjct: 291 KLMWRD-----NSHTKIYPIRFCKVIEKWASHFANGSQQDTQEFISYLLDCLHED 340
>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
mutus]
Length = 353
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 163/397 (41%), Gaps = 96/397 (24%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L KSQ + ++L+ + ++ S
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--------YKSQPRKKESLLTCLADLFHSI 75
Query: 67 NL------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQY 116
V+ K + LR + FD QQDA EFL YLL L EE K ++
Sbjct: 76 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERK--QEKQ 133
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
NG + + S T + + +IF G L + RC C+ S+ E F
Sbjct: 134 NGRLPNGNIDSENNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDF 182
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+LS+ V + TS + CL F
Sbjct: 183 LDLSVDVE--------------------QNTSITH-------------------CLRGFS 203
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIK 287
N ETL + C+ C+ + + K ++++LP +L L KRF +T K++ +
Sbjct: 204 NTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVV 262
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP L++ + + SG YDL AV H G GHY A + W L+DD
Sbjct: 263 FP---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDD 316
Query: 348 TVVSPVDAQTVE---------SAEAEHGAYILVYQRR 375
+V +DAQ +E S +E G YIL YQ R
Sbjct: 317 DIVEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 352
>gi|348576282|ref|XP_003473916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49-like [Cavia
porcellus]
Length = 670
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 164/445 (36%), Gaps = 115/445 (25%)
Query: 1 MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNED---------------------- 38
++PG+ G+ N GNTCY+NS+LQ LS+ FR L D
Sbjct: 240 VAPGVTGLRNLGNTCYMNSILQVLSHLRKFRECFLKLDPCTTEHLFAHRKARLSATEPQA 299
Query: 39 ---------------------------IPIHPDSKSQGQLVDALVNFMKMMWSSGNLVLN 71
I S L L ++MWS +++
Sbjct: 300 SSDRAEACRRHDLCWTGGASLSRSLELIQNKEPSSRHISLCHELHTLFRVMWSGRWALVS 359
Query: 72 TKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGS 131
A+L ++ S F G QQDAQEFL LL + +E + GST
Sbjct: 360 PFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQELEA-----EGSTR---------- 404
Query: 132 FRALHYWEKFQTTEA--SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 189
R L + + + T+ V + IF GQL S V C +C S E FW+LSL P
Sbjct: 405 -RILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIEPFWDLSLEFP----E 459
Query: 190 LYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN---TCQ 246
Y C + V P+ L E L KF E L C
Sbjct: 460 RYHCIEKGFV--------------------PLNQTECLLTEMLAKFTETEALEGRIYACD 499
Query: 247 YCKKQ-----------SDLVKLYEIQRLPPVLILWFKRF---SSNFTQKVTSPIKFPREG 292
C + S+ K I LP VL L KRF N +K+ + F +
Sbjct: 500 QCNGKRRKSNPKPLVLSEARKQLMIYTLPQVLRLHLKRFRWSGRNHREKIGVHVAF-EQV 558
Query: 293 LDMEYYISAS--GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
L ME Y + + YDL AV H GK GHYTAYC G W +D+ +
Sbjct: 559 LTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKL 618
Query: 351 SPVDAQTVESAEAEHGAYILVYQRR 375
+ + V + AYIL Y +R
Sbjct: 619 NVCSVEEVCKTQ----AYILFYTQR 639
>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
Length = 799
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 159/385 (41%), Gaps = 95/385 (24%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVN-FMKMMWS- 64
G+ N GNTC++NSVLQ L +TP +LL+ G++ + VN F + +
Sbjct: 39 GLQNLGNTCFMNSVLQLLVHTPPLAELLLSGGF---------GRVHNGAVNGFYPIQLAR 89
Query: 65 ---SGNLVLNTKAILL------ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQ 115
S +L T++ L +LR ++ F +Q+DA EFL+ LL A++E
Sbjct: 90 ELVSRSLAQTTRSPLAPMKFAKSLRRISRSFRLGRQEDAHEFLIALLDAMHE-------- 141
Query: 116 YNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEI 175
S + + + S IF G++RS V+CS C S Y+
Sbjct: 142 --------------ASIAGITPKPSPELAQTSFIYRIFGGRMRSQVKCSECGYESNTYDP 187
Query: 176 FWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKF 235
+LSL + R S+ KR L F
Sbjct: 188 CIDLSLEI---------------TRASSVKR------------------------ALEHF 208
Query: 236 FNGETLHNTCQY-CKKQSDLVKLYE---IQRLPPVLILWFKRFSSNFT-QKVTSPIKFPR 290
GE L +Y C +Q V+ + + P VL++ KRF +F+ K++ I F
Sbjct: 209 TKGEVLDGGNKYKCPRQQKAVRAVKRMTVDSAPNVLMIQLKRFEFSFSGHKISKKIDFDL 268
Query: 291 EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVV 350
E LD+ ++S + YDL AV H G + GHY AY R G W++ DDT V
Sbjct: 269 E-LDLGPFMSEA---PLVPALYDLYAVLVHSGHSVHSGHYYAYV-RAPNGIWHICDDTHV 323
Query: 351 SPVDAQTVESAEAEHGAYILVYQRR 375
AQ E AYIL Y +R
Sbjct: 324 ----AQVAERQVMAQKAYILFYLKR 344
>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
caballus]
Length = 414
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 158/392 (40%), Gaps = 85/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 84 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 139
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 140 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 199
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N S+ S T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 200 GNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 248
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 249 DVE--------------------QNTSITH-------------------CLRGFSNTETL 269
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 270 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 325
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 326 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEK 382
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 383 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 413
>gi|308469287|ref|XP_003096882.1| hypothetical protein CRE_24714 [Caenorhabditis remanei]
gi|308241297|gb|EFO85249.1| hypothetical protein CRE_24714 [Caenorhabditis remanei]
Length = 901
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 5/187 (2%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVN 57
+PG G++N GNTC++ S QCLSN P R+ LN+ D+ + + G L A+
Sbjct: 276 TPGACGLSNLGNTCFMASAFQCLSNMPPLRDYFLNDSYLSDLNVENPLGTHGHLAAAVGE 335
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
MK MWS +N + + + +F+G QQDA E + Y+L L+E+ + +
Sbjct: 336 LMKGMWSGEFASINPRKFKGIIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIKKKPY 395
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
S+ +K + A WE ++ S+ D GQL+S++ C C++ S ++ F
Sbjct: 396 IED-SDEDAKLPEAEYAAKSWEIYKMRNDSIIVDTLHGQLKSTLICPVCEKISIKFDPFG 454
Query: 178 ELSLPVP 184
LSLP+P
Sbjct: 455 YLSLPLP 461
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
L E L F E L C CKK K ++ +LP +LIL KRF +K
Sbjct: 699 LEETLEWFTKKEQLGEQDSWYCPQCKKHERATKQLDLWKLPEILILHLKRFQYTKWSREK 758
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+T + P GLD+ ++ + YDL AVS H G + GHYTA + +
Sbjct: 759 LTWEVVIPVRGLDLTDKVANPNH---EKAIYDLIAVSRHYGSLS-GGHYTAIGFNDKARK 814
Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
W+ ++D+ S + T E E+ YILVY+RR
Sbjct: 815 WFDFNDSSASSTSSPT-EPYESS-DPYILVYRRR 846
>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
guttata]
Length = 358
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 161/396 (40%), Gaps = 94/396 (23%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR+ +L + + L+ L + + +
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRDKVL----AYKSQPRKKENLLTCLADLFHSIATQK 84
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQY----N 117
V+ K + LR + FD QQDA EFL YLL A + +E + Q N
Sbjct: 85 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 144
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
GS S +SS + + +IF G L + RC C+ S+ E F
Sbjct: 145 GSVDSESSS----------------PPDPTWVHEIFQGTLTNETRCLTCETVSSKDEDFL 188
Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
+LS+ V + TS + CL F N
Sbjct: 189 DLSVDVE--------------------QNTSITH-------------------CLRGFSN 209
Query: 238 GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKF 288
ETL + C+ C+ + + K ++++LP +L L KRF +T K++ + F
Sbjct: 210 TETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVF 268
Query: 289 PREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDT 348
P L++ + + SG YDL AV H G GHY A + W L+DD
Sbjct: 269 P---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDD 322
Query: 349 VVSPVDAQTVE---------SAEAEHGAYILVYQRR 375
+V +DAQ +E S +E G YIL YQ R
Sbjct: 323 IVEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 357
>gi|341897552|gb|EGT53487.1| hypothetical protein CAEBREN_19011 [Caenorhabditis brenneri]
Length = 902
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVN 57
+PG G++N GNTC++ S QCLSN P R+ +NE D+ + G L A+ +
Sbjct: 277 TPGACGLSNLGNTCFMASAFQCLSNIPPLRDYFINEEYLQDLNEENPLGTHGNLAVAVGD 336
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
MK MWS +N + + + +F+G QQDA E + Y+L L+E+ + +
Sbjct: 337 LMKGMWSGEYASINPRKFKGIIGQFAPRFNGYSQQDAHELMAYVLDGLHEDLNRIKKKPY 396
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
++ +K + A W+ ++ S+ D GQLRS++ C C++ S ++ F
Sbjct: 397 IED-NDEDAKLPEAEYAAKSWQVYKMRNDSIIVDTLHGQLRSTLICPVCQKISIKFDPFG 455
Query: 178 ELSLPVPP 185
LSLP+PP
Sbjct: 456 YLSLPLPP 463
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 16/156 (10%)
Query: 228 LYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
L E LN F E L C CKK K ++ +LP +LIL KRF +K
Sbjct: 702 LEETLNWFTKKEQLGEQDSWYCPQCKKHERASKQLDLWKLPEILILHLKRFQYTKWSREK 761
Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
+T + P GLD+ ++ YDL AVS H G + GHYTA + +
Sbjct: 762 LTWDVVIPVRGLDLTAKVANPNHEAA---VYDLIAVSRHYGSLS-GGHYTAIGFNDKAQK 817
Query: 342 WYLYDD--TVVSPVDAQTVESAEAEHGAYILVYQRR 375
W+ ++D + VS + ES++ YILVY+RR
Sbjct: 818 WFDFNDSSSNVSSPPNEPYESSD----PYILVYRRR 849
>gi|207345835|gb|EDZ72528.1| YER144Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 545
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 159/402 (39%), Gaps = 79/402 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN CY+N +LQCL T + L+ I S+G L + M
Sbjct: 173 GLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYLNFINFDSSRGSKGLLAKNFAILVNNM 232
Query: 63 WSSGNLVL-NTKAILLALRSYTK-------KFDGNQQQDAQEFLLYLLAALNEE-----A 109
G N + I + + K + + QQD QEF +LL L+E+ +
Sbjct: 233 HRHGAFTPPNVRTIPVQTIQFKKICGHINPMYSDSMQQDCQEFCQFLLDGLHEDLNQNGS 292
Query: 110 KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
K Q + + AL WE+F T+ S D+F GQ S ++C C+ T
Sbjct: 293 KKHLKQLSDEEERMREKMSIRKASALE-WERFLLTDFSAIIDLFQGQYASRLQCQVCEHT 351
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
ST Y+ F LS+PVP R C +
Sbjct: 352 STTYQTFSVLSVPVP---------------RVKTC----------------------NIL 374
Query: 230 ECLNKFFNGETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSP 285
+C +F E L +C C K+ K +I RLP LI+ KRF N K
Sbjct: 375 DCFREFTKCERLGVDEQWSCPKCLKKQPSTKQLKITRLPKKLIINLKRF-DNQMNKNNVF 433
Query: 286 IKFPREGLDMEYYISAS-------GRRVESR-----YTYDLCAVSNHIGKTALY-GHYTA 332
+++P LD+ Y + + +R + Y L V+ H G +LY GHYT+
Sbjct: 434 VQYPY-SLDLTPYWARDFNHEAIVNEDIPTRGQVPPFRYRLYGVACHSG--SLYGGHYTS 490
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
Y + WY +DD++ P+ T + AY+L Y+R
Sbjct: 491 YVYKGPKKGWYFFDDSLYRPI---TFSTEFITPSAYVLFYER 529
>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
garnettii]
gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
caballus]
Length = 370
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 158/392 (40%), Gaps = 85/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 155
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N S+ S T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 156 GNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 204
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 205 DVE--------------------QNTSITH-------------------CLRGFSNTETL 225
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 226 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 281
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 282 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEK 338
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 339 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 369
>gi|301792557|ref|XP_002931245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
[Ailuropoda melanoleuca]
gi|281352689|gb|EFB28273.1| hypothetical protein PANDA_022094 [Ailuropoda melanoleuca]
Length = 703
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 164/390 (42%), Gaps = 62/390 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 353 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFNAMY 411
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 412 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSIGQEANN 468
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 469 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 510
Query: 184 PPGGGTLYECQLRSSVRC-SNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
P T +S R S R + PG +L +CL F E L
Sbjct: 511 PGSCATFSS---QSPERADSTVSRDDHI------------PGIPSLTDCLQWFTRPEYLG 555
Query: 243 NT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDME 296
+ C C+ + +K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 556 SNSKIKCSSCQSYQESIKQLTMKKLPVVACFHLKRFEHVGKQRRKINTFISFPLE-LDMT 614
Query: 297 YYISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
+++++ + Y L AV NH G T GHYT++ R++ +W+
Sbjct: 615 PFLASTKESRMKEGQPQTDCTSNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSC 672
Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
DD +++ + + +E Y+L Y ++
Sbjct: 673 DDAIITKATIEDLLYSE----GYLLFYHKQ 698
>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
[Ailuropoda melanoleuca]
Length = 354
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 158/392 (40%), Gaps = 85/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 79
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 80 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 139
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N S+ S T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 140 GNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 188
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 189 DVE--------------------QNTSITH-------------------CLRGFSNTETL 209
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 210 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 265
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 266 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVEK 322
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 323 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 353
>gi|50306927|ref|XP_453439.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642573|emb|CAH00535.1| KLLA0D08459p [Kluyveromyces lactis]
Length = 750
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 160/380 (42%), Gaps = 57/380 (15%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N G TCY N+ +Q + + PA ++ L D+ + L MWSS
Sbjct: 363 GLLNHGVTCYTNAAVQAMVHIPAIQHYLFQLLRGNFKDTVKSNCVSMLLAETTMRMWSSD 422
Query: 67 ---NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
N +N ++ AL Q+D+ E+ + L++ L E++ VP
Sbjct: 423 STKNTYINPDKLINALEDINCMMSAWNQEDSHEYFMSLMSRLQEDS--VP---------- 470
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
K S+ D+F G L+ SV+CSNC ST + ++LSL +
Sbjct: 471 ----------------KGHKMTESIIYDVFGGLLQQSVKCSNCGEISTTEQPIYDLSLHL 514
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
G Q ++SV N S + + ++ + + FFN E +
Sbjct: 515 ---KGRKTTDQDQNSVGQDNSIDNSVDQQQSSKRRF-------SIEKSIRDFFNPELIKR 564
Query: 244 -------TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLD 294
TC+ CKK ++ +K +I R P L++ K+F N T K+ + +P LD
Sbjct: 565 VDNKEGYTCEKCKKVTNALKSNKIIRAPETLVVHLKKFRFNGTSSSKMKQAVSYPM-FLD 623
Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
+ Y S + R Y L +V H G++ GHY A+C++ G W YDD ++ +
Sbjct: 624 LTEYCHESISSLPVR--YQLISVVVHEGRSLSSGHYIAHCKQPD-GSWATYDDEYINKIS 680
Query: 355 AQTVESAEAEHGAYILVYQR 374
+ + E AY LVY R
Sbjct: 681 EKQL---LKEPNAYFLVYTR 697
>gi|403335477|gb|EJY66914.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 783
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 160/408 (39%), Gaps = 120/408 (29%)
Query: 7 GIANAGNTCYINSVLQCLSNT-PAFRNVLLNED-------------------IPIHPDSK 46
G+ N GNTC+ NSV+QCL++T P F E + I D +
Sbjct: 102 GMPNLGNTCFFNSVMQCLTHTKPLFLYCASKEHYSKCQKRESCFLCTYTQYILKIQTDKR 161
Query: 47 SQGQLVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALN 106
+Q QL+ V+ +K +W+ ++ QQ+DA EFL+ L +
Sbjct: 162 AQPQLI---VSRLKTIWN--------------------RYRVGQQEDAHEFLILFLES-- 196
Query: 107 EEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
+ N+ + R + + +++T IF G+ RS V C C
Sbjct: 197 --------------FINSCFQTARPPRDIIHKHQYKTP----ILKIFGGKSRSQVHCLGC 238
Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
S +E LSL +P G PPG
Sbjct: 239 NYKSNTFEDLITLSLDLPFGARG-------------------------------KPPGPM 267
Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKV 282
T CLN+F E L C CKK+ + K + I + P +LI+ FKRF + F +KV
Sbjct: 268 TFESCLNRFCTSEHLKGENKYQCSNCKKKCEATKRFSIDKTPRILIIHFKRFDA-FGRKV 326
Query: 283 TSPIKFPREGLDMEYYISAS---------------GRRVESRYTYDLCAVSNHIGKTALY 327
+ IK+P + ++ + S S S+ YDL V H+G
Sbjct: 327 PTFIKYP-QSFSLKEFTSQSIDAKHDPKIRQELQTNTDKNSQELYDLFGVVVHMGGGCRS 385
Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
GHY +YC + TG WY + S + + E A + AY+L YQ+R
Sbjct: 386 GHYYSYC-KNSTGNWY---ECDDSSISTSSTEQA-LKQQAYVLFYQKR 428
>gi|224143342|ref|XP_002324922.1| predicted protein [Populus trichocarpa]
gi|222866356|gb|EEF03487.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 173/399 (43%), Gaps = 81/399 (20%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE-DIPIHPDSKSQGQLVDALVNF---M 59
GL G+ N G+TC++NSVLQ L + P FRN L+E P +S QL A +F
Sbjct: 105 GLRGLNNLGSTCFMNSVLQALLHAPPFRNYFLSERHDPETCKKRSSDQLCLA-CDFGVIF 163
Query: 60 KMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNE-EAKVVPDQYNG 118
++S + L + ++ +QQDA EF + +L ++E E K
Sbjct: 164 SAVYSGDRTPYSPAQFLYSWWQHSANLASYEQQDAHEFFISVLDGIHEREGK-------- 215
Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+S+K G + + + +F G LRS V C+ C TST Y+ +
Sbjct: 216 ---ERSSNKDNGGCQCIAH-------------RVFSGMLRSDVTCTTCGFTSTTYDPCVD 259
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
+SL + S+V +N S+ G TL CL+ F
Sbjct: 260 ISLNMDTTNF--------STVNVAN-------------KSVREDTGRSTLLACLDLFTRP 298
Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPI----KFPR 290
E L + CQ C+++ D +K I+RLP VL L KRF + ++ + I +FP
Sbjct: 299 ERLGSDQKLYCQNCQEKRDSLKQMSIKRLPLVLSLHIKRFEHSSLRRSSRKIDWYLQFPF 358
Query: 291 EGLDMEYYISAS------GRRV--------ESRYTYDLCAVSNHIGKTALYGHYTAYCRR 336
LDM Y+S S G RV + +++ AV H G GHY Y R
Sbjct: 359 -SLDMTPYLSPSIVRNRFGNRVFGFESDKPDISSEFEIFAVVTHSGMLD-SGHYVTYLRL 416
Query: 337 EGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
+ +WY DD ++ VD + V +A+ Y++ Y ++
Sbjct: 417 Q--NQWYKCDDAWITEVDERIVRAAQ----CYMIFYVQK 449
>gi|335296741|ref|XP_003130951.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sus scrofa]
Length = 366
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 162/397 (40%), Gaps = 95/397 (23%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L KSQ + ++L+ + ++ S
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--------YKSQPRKKESLLTCLADLFHSI 87
Query: 67 NL------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQY 116
V+ K + LR + FD QQDA EFL YLL L EE K ++
Sbjct: 88 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERK--QEKQ 145
Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
NG + + T + + +IF G L + RC C+ S+ E F
Sbjct: 146 NGRLPNGNIDTE----------NNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDF 195
Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+LS+ V + TS + CL F
Sbjct: 196 LDLSVDVE--------------------QNTSITH-------------------CLRGFS 216
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIK 287
N ETL + C+ C+ + + K ++++LP +L L KRF +T K++ +
Sbjct: 217 NTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVV 275
Query: 288 FPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
FP L++ + + SG YDL AV H G GHY A + W L+DD
Sbjct: 276 FP---LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPHRGHYIAIVKSHDF--WLLFDD 329
Query: 348 TVVSPVDAQTVE---------SAEAEHGAYILVYQRR 375
+V +DAQ +E S +E G YIL YQ R
Sbjct: 330 DIVEKIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 365
>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
[Desmodus rotundus]
Length = 374
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 159/393 (40%), Gaps = 87/393 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 44 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 99
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 100 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERK--QEKQNGRL 157
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ + + T + + +IF G L + RC C+ S+ E F +LS
Sbjct: 158 PNGSVDSE----------NNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 207
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 208 VDVE--------------------QNTSITH-------------------CLRGFSNTET 228
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 229 LCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP-- 285
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 286 -LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVE 341
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 342 KIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 373
>gi|57524946|ref|NP_001006134.1| ubiquitin carboxyl-terminal hydrolase 4 [Gallus gallus]
gi|53131277|emb|CAG31805.1| hypothetical protein RCJMB04_11i7 [Gallus gallus]
Length = 964
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNF 58
PGL G++N GNTC++NS LQCLSNTP + L + + + +G++ +A
Sbjct: 324 PGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEAYAEL 383
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQYN 117
+K +WS + + + + +F G QQQD+QE L +LL L+E+ +V Y
Sbjct: 384 IKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 443
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+N V + A WE + S+ DIF G +S++ C C + S ++ F
Sbjct: 444 ELKDANGRPDSVVAKEA---WENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFC 500
Query: 178 ELSLPVPPGGGTLYECQL 195
L+LP+P L E L
Sbjct: 501 YLTLPLPLKRDRLLEVTL 518
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 81/156 (51%), Gaps = 16/156 (10%)
Query: 227 TLYECLNKFFNGETL--HNT--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
L +C+ F ETL H+ C CKK K +++ LP +L++ KRFS + +
Sbjct: 797 ALKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRD 856
Query: 281 KVTSPIKFPREGLDM-EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
K+ + ++FP GL+M E+ G Y YDL AVSNH G + GHYTAY + +
Sbjct: 857 KLDTVVEFPIRGLNMSEFVCDPRG----GSYVYDLIAVSNHYGAMGV-GHYTAYAKNKVN 911
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
G WY +DD+ VS + AY+L YQRR
Sbjct: 912 GEWYYFDDSSVSLASEDQI----VTKAAYVLFYQRR 943
>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
familiaris]
Length = 370
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 158/392 (40%), Gaps = 85/392 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 95
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLL---AALNEEAKVVPDQYNGSTY 121
V+ K + LR + FD QQDA EFL YLL A + +E + Q
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 155
Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
N S+ S T + + +IF G L + RC C+ S+ E F +LS+
Sbjct: 156 GNIDSENNNS-----------TPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSV 204
Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
V + TS + CL F N ETL
Sbjct: 205 DVE--------------------QNTSITH-------------------CLRGFSNTETL 225
Query: 242 HNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREG 292
+ C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 226 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP--- 281
Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 282 LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHEF--WLLFDDDIVEK 338
Query: 353 VDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 339 IDAQAIEEFYGLTSDISKNSESG-YILFYQSR 369
>gi|354491289|ref|XP_003507788.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 51-like
[Cricetulus griseus]
Length = 709
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 66/388 (17%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L+ P ++ L++ S S LV + + + M+
Sbjct: 367 GLRGLINLGNTCFMNCIVQALTRIPLLKDFFLSDKHKCTMTSPSLC-LVCEMSSLFQAMY 425
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ ++ +
Sbjct: 426 SGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSR------------D 473
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
S +Q G+ + + + IF G L+S + C C ST + W++SL +
Sbjct: 474 DSIEQEGNPNSCN----------CIIDQIFTGGLQSDLTCQVCHGVSTTIDPCWDISLDL 523
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P G+ + +V K GG +L +CL F E L +
Sbjct: 524 P---GSYTSERASGTVSRDGSK-----------------AGGPSLTDCLQWFTRPEDLGS 563
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 564 SAKIKCSRCQSYQESTKQLTMKKLPIVACFHLKRFEHLGKQRRKINTFISFPLE-LDMTP 622
Query: 298 YISASGRR----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
+++++ V S Y L AV NH G T GHYT++ R++ +W+ DD
Sbjct: 623 FLASTKESIMKGQPLADCVPSENKYSLFAVINHHG-TLESGHYTSFVRQQ-KDQWFSCDD 680
Query: 348 TVVSPVDAQTVESAEAEHGAYILVYQRR 375
+V+ + + +E Y+L Y R+
Sbjct: 681 AIVTKATMEELLYSE----GYLLFYHRQ 704
>gi|398364885|ref|NP_011071.3| Ubp5p [Saccharomyces cerevisiae S288c]
gi|731042|sp|P39944.1|UBP5_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 5; AltName:
Full=Deubiquitinating enzyme 5; AltName: Full=Ubiquitin
thioesterase 5; AltName:
Full=Ubiquitin-specific-processing protease 5
gi|595377|gb|AAC48928.1| ubiquitin-specific protease [Saccharomyces cerevisiae]
gi|603384|gb|AAB64671.1| Ubp5p: ubiquitin-specific protease [Saccharomyces cerevisiae]
gi|285811777|tpg|DAA07805.1| TPA: Ubp5p [Saccharomyces cerevisiae S288c]
gi|392299847|gb|EIW10939.1| Ubp5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 805
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 159/402 (39%), Gaps = 79/402 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN CY+N +LQCL T + L+ I S+G L + M
Sbjct: 447 GLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYLNFINFDSSRGSKGLLAKNFAILVNNM 506
Query: 63 WSSGNLVL-NTKAILLALRSYTK-------KFDGNQQQDAQEFLLYLLAALNEE-----A 109
G N + I + + K + + QQD QEF +LL L+E+ +
Sbjct: 507 HRHGAFTPPNVRTIPVQTIQFKKICGHINPMYSDSMQQDCQEFCQFLLDGLHEDLNQNGS 566
Query: 110 KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
K Q + + AL WE+F T+ S D+F GQ S ++C C+ T
Sbjct: 567 KKHLKQLSDEEERMREKMSIRKASALE-WERFLLTDFSAIIDLFQGQYASRLQCQVCEHT 625
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
ST Y+ F LS+PVP R C +
Sbjct: 626 STTYQTFSVLSVPVP---------------RVKTC----------------------NIL 648
Query: 230 ECLNKFFNGETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSP 285
+C +F E L +C C K+ K +I RLP LI+ KRF N K
Sbjct: 649 DCFREFTKCERLGVDEQWSCPKCLKKQPSTKQLKITRLPKKLIINLKRF-DNQMNKNNVF 707
Query: 286 IKFPREGLDMEYYISAS-------GRRVESR-----YTYDLCAVSNHIGKTALY-GHYTA 332
+++P LD+ Y + + +R + Y L V+ H G +LY GHYT+
Sbjct: 708 VQYPY-SLDLTPYWARDFNHEAIVNEDIPTRGQVPPFRYRLYGVACHSG--SLYGGHYTS 764
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
Y + WY +DD++ P+ T + AY+L Y+R
Sbjct: 765 YVYKGPKKGWYFFDDSLYRPI---TFSTEFITPSAYVLFYER 803
>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
Length = 440
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 157/393 (39%), Gaps = 87/393 (22%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L + + L+ L + + +
Sbjct: 110 GLVNFGNTCYCNSVLQALYFCRPFREKVL----AYKSQPRKKENLLTCLADLFHSIATQK 165
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
V+ K + LR + FD QQDA EFL YLL L EE K ++ NG
Sbjct: 166 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERK--QEKQNGRL 223
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
+ + S W +IF G L + RC C+ S+ E F +LS
Sbjct: 224 PNGNIDSENNSSPPDPTW----------VHEIFQGTLTNETRCLTCETISSKDEDFLDLS 273
Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
+ V + TS + CL F N ET
Sbjct: 274 VDVE--------------------QNTSITH-------------------CLRGFSNTET 294
Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
L + C+ C+ + + K ++++LP +L L KRF +T K++ + FP
Sbjct: 295 LCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT-KLSYRVVFP-- 351
Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
L++ + + SG YDL AV H G GHY A + W L+DD +V
Sbjct: 352 -LELRLF-NTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDF--WLLFDDDIVE 407
Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
+DAQ +E S +E G YIL YQ R
Sbjct: 408 KIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 439
>gi|326927732|ref|XP_003210044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Meleagris
gallopavo]
Length = 917
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 8/198 (4%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNF 58
PGL G++N GNTC++NS LQCLSNTP + L + + + +G++ +A
Sbjct: 277 PGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEAYAEL 336
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEA-KVVPDQYN 117
+K +WS + + + + +F G QQQD+QE L +LL L+E+ +V Y
Sbjct: 337 IKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 396
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+N V + A WE + S+ DIF G +S++ C C + S ++ F
Sbjct: 397 ELKDANGRPDSVVAKEA---WENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFC 453
Query: 178 ELSLPVPPGGGTLYECQL 195
L+LP+P L E L
Sbjct: 454 YLTLPLPLKRDRLLEVTL 471
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 16/156 (10%)
Query: 227 TLYECLNKFFNGETL--HNT--CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
L +C+ F ETL H+ C CKK K +++ LP +L++ KRFS + +
Sbjct: 750 ALKDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRD 809
Query: 281 KVTSPIKFPREGLDM-EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
K+ + ++FP GL+M E+ G S Y YDL AVSNH G + GHYTAY + +
Sbjct: 810 KLDTVVEFPIRGLNMSEFVCDPRG----SSYVYDLIAVSNHYGAMGV-GHYTAYAKNKVN 864
Query: 340 GRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
G+WY +DD+ VS + AY+L YQRR
Sbjct: 865 GKWYYFDDSSVSLASEDQI----VTKAAYVLFYQRR 896
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 156/369 (42%), Gaps = 71/369 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++NS LQCL+ T N +L + + + +++ +SG
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
N V+ ++L L+ K F Q+DA EFL Y + A+ + +P N
Sbjct: 144 N-VIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAM--QKSCLP--------GNKLD 192
Query: 127 KQVGSFRALHYWEKFQTTEASVF-SDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
+Q T+A+ F IF G LRS V+C NCK S ++ + ++SL +
Sbjct: 193 RQ---------------TQATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEI-- 235
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTC 245
K T+ + F + P G Y+ C
Sbjct: 236 -------------------KTAQTLSKAFEQFVKPEQLDGDNAYK--------------C 262
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISASGRR 305
CKK K + + R VL + KRF++ K+T +++ E LD+ ++S S
Sbjct: 263 SKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGKITKDVRYA-EHLDLRPFMSQSHGE 321
Query: 306 VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEH 365
+ Y L AV H G + GHY Y + G+WY +D+ VS D +TV + +
Sbjct: 322 PQ---IYALYAVLVHSGFSCHAGHYYCYI-KASNGQWYQMNDSSVSLSDIRTVLNQQ--- 374
Query: 366 GAYILVYQR 374
AY+L Y R
Sbjct: 375 -AYLLFYIR 382
>gi|431896007|gb|ELK05425.1| Ubiquitin carboxyl-terminal hydrolase 8 [Pteropus alecto]
Length = 1022
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 8/186 (4%)
Query: 3 PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
P L G+ N GNTCY+NS+LQCL N P F +EDI +G++ +
Sbjct: 770 PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYHEDINRSNLLGHKGEVAEEFGII 829
Query: 59 MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
MK +W+ ++ K + + +F G QQD+QE LL+L+ L+E+ N
Sbjct: 830 MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 886
Query: 119 STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
+ ++ + F+A H W+K + S+ +F GQ +S+V+C C + S +E F
Sbjct: 887 KRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 946
Query: 178 ELSLPV 183
LSLP+
Sbjct: 947 YLSLPL 952
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 315 CAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
C + NH G GHYTAYC+ RW+ +DD VS + +V+SA AYIL Y
Sbjct: 958 CTLQNHYGGLD-GGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSA----AAYILFY 1010
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 156/369 (42%), Gaps = 71/369 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++NS LQCL+ T N +L + + + +++ +SG
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
N V+ ++L L+ K F Q+DA EFL Y + A+ + +P N
Sbjct: 144 N-VIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAM--QKSCLP--------GNKLD 192
Query: 127 KQVGSFRALHYWEKFQTTEASVF-SDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPP 185
+Q T+A+ F IF G LRS V+C NCK S ++ + ++SL +
Sbjct: 193 RQ---------------TQATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEI-- 235
Query: 186 GGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTC 245
K T+ + F + P G Y+ C
Sbjct: 236 -------------------KTAQTLSKAFEQFVKPEQLDGDNAYK--------------C 262
Query: 246 QYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYISASGRR 305
CKK K + + R VL + KRF++ K+T +++ E LD+ ++S S
Sbjct: 263 SKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGKITKDVRYA-EHLDLRPFMSQSHGE 321
Query: 306 VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEH 365
+ Y L AV H G + GHY Y + G+WY +D+ VS D +TV + +
Sbjct: 322 PQ---IYALYAVLVHSGFSCHAGHYYCYI-KASNGQWYQMNDSSVSLSDIRTVLNQQ--- 374
Query: 366 GAYILVYQR 374
AY+L Y R
Sbjct: 375 -AYLLFYIR 382
>gi|443715045|gb|ELU07196.1| hypothetical protein CAPTEDRAFT_18184 [Capitella teleta]
Length = 533
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 175/402 (43%), Gaps = 60/402 (14%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ +SQ LV + + +
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDYFLSDQHKCQMTQESQQCLVCEMSRLFQEFY 216
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L +++ K ++ + ++
Sbjct: 217 SGVRTPHTPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVIHQHCKASRNKED----AD 272
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS--L 181
++ QV + IF G L+S V C C + +Y E+S L
Sbjct: 273 GNTAQVCD---------------CIIDRIFTGGLQSDVTCQEC---NILYTFRLEMSPRL 314
Query: 182 PVPPGGGTLYECQLRSSVRCSN----CKRTS-TVYEIFWELSLPVPPGGGTLYECLNKFF 236
P G ++++ + C S T+ + L +L CL +F
Sbjct: 315 STPSGISPWISAPRKTTLHLVSWSDPCATDSHTLISAVFSNGLDRFEEATSLTYCLRRFT 374
Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPR 290
E L +T C C + K +++LP V KRF S+ + +K+++ + FP
Sbjct: 375 RPEHLGSTAKIKCSKCHNYQESTKQLTMKKLPLVACFHLKRFEHSTGYHKKISTYVSFPE 434
Query: 291 EGLDMEYYISAS---------------GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCR 335
E LDM ++SAS + S Y L AV NH G TA GHYT + R
Sbjct: 435 E-LDMTPFMSASRDNNNGYSHQVIQEAASGLTSENKYSLYAVVNHRG-TADTGHYTCFIR 492
Query: 336 REGTGRWYLYDDTVVSP--VDAQTVESAEAEHGAYILVYQRR 375
+ + W+ +D +++ +D + ++S Y+L Y ++
Sbjct: 493 QHKS-HWFRCEDHLITKASLDYEVLKSE-----GYLLFYHKQ 528
>gi|441677858|ref|XP_003281169.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Nomascus
leucogenys]
Length = 649
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 56/352 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++TP R+ L++ S S LV + + + +
Sbjct: 298 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 356
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + ++ + G +QQDA EFL+ L L+ K NG +N
Sbjct: 357 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 413
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + FW++SL +
Sbjct: 414 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 455
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
P + S N + + G TL +CL +F E L +
Sbjct: 456 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 501
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
+ C C + K +++LP V KRF S+ +K+T+ + FP E LDM
Sbjct: 502 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 560
Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRRE 337
++++S R+ +Y Y L AV NH G T GHYT++ R+
Sbjct: 561 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH 611
>gi|148707160|gb|EDL39107.1| ubiquitin specific peptidase 21, isoform CRA_a [Mus musculus]
Length = 451
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
G G+ N GNTC++N+VLQCLS+T R+ L D P +L +A + + +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 63 WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
W + +N + Y F G QQDAQEFL L+ L N + P
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329
Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
+ + G+ RA W+++ E S D+FVGQL+S ++C C
Sbjct: 330 SGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 389
Query: 168 RTSTVYEIFWELSLPVPPGG 187
ST +E+F +LSLP+P G
Sbjct: 390 YRSTTFEVFCDLSLPIPKKG 409
>gi|258574921|ref|XP_002541642.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901908|gb|EEP76309.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1115
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 176/411 (42%), Gaps = 80/411 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSK---SQGQLVDALVNFMKMMW 63
G+ N G+TCY+NS++Q LS T + SQG L N ++ +W
Sbjct: 738 GLVNLGSTCYMNSIIQSLSATTELTKFFFDNRFHAQVQKNWKGSQGVLPGLYANLVRSLW 797
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
+ V+ + + ++ G+QQQDA+EF L+ L+E+ V +
Sbjct: 798 KNDVEVIRPTSFRKFIGRLNSEWAGSQQQDAKEFFDVLVDCLHEDLNV--NWQRTPLRPL 855
Query: 124 TSSKQVGSFR-ALHY-----WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
T+ +++ R +H W ++ E S S +F GQ S +RC+ C+RTST YE F+
Sbjct: 856 TTEQEMRRERTPVHQVSGIEWSRYCHRELSYISTLFAGQHASRLRCTTCRRTSTTYEAFY 915
Query: 178 ELSLPVP-PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
+S+ +P G G +Y+C LRS C +
Sbjct: 916 SISVEIPVSGTGDIYQC-LRSY--------------------------------CQEEML 942
Query: 237 NGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ---KVTSPIKFPREGL 293
+G+ + C +C+ + + K + R P L+L FKRFS++ Q K+ +P+ FP GL
Sbjct: 943 SGDEVWK-CPHCRTEREATKQIILTRAPRFLVLHFKRFSASHRQQARKIHTPVYFPLSGL 1001
Query: 294 DMEYYI------------------SASGRRVE---------SRYTYDLCAVSNHIGKTAL 326
D+ ++ S + + E Y Y+ AV H+G T
Sbjct: 1002 DLSPFMIEPSNYPPTPQQNGNPTHSDTSTQAELTPHELATSPPYIYNAYAVVRHLGSTIH 1061
Query: 327 YGHYTAYCRREGTGRWYLYDD---TVVSPVDAQTVESAEAEHGAYILVYQR 374
GHY + R W +DD T +P ++ + + E AY++ Y+R
Sbjct: 1062 EGHYISMARDANRDCWRKFDDHRVTDFTPGGPRSPDCLQNEQ-AYLVFYER 1111
>gi|194867188|ref|XP_001972018.1| GG15285 [Drosophila erecta]
gi|251765095|sp|B3NC86.1|UBP36_DROER RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190653801|gb|EDV51044.1| GG15285 [Drosophila erecta]
Length = 1085
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 159/375 (42%), Gaps = 77/375 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ---GQLVDALVNFMKMMW 63
G+ N GNTCY+NS LQ L + PA N L++E + + ++ G +V A+ + +
Sbjct: 174 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLENCNVAESGGGCIVCAMAKTL-LAT 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S + I L+ K +Q+DA EFL +L+ A+ E A ++
Sbjct: 233 QSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAM-ERAYLM----------- 280
Query: 124 TSSKQVGSFRALHYWEKFQ-TTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLP 182
R +Y E Q E + IF G LRS VRC +C S ++ F +L L
Sbjct: 281 ---------RFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLL- 330
Query: 183 VPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
+R ++ TL + F+ E L
Sbjct: 331 ---------------DIRKAD-----------------------TLEDAFEGHFSRERLE 352
Query: 243 N---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKF-PREGLDMEYY 298
+ C+ CKK+ K + ++R P L + KRFS K+T I F PR +D+ Y
Sbjct: 353 DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM-IGNKLTKQISFKPR--IDLSKY 409
Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
+ S TY L ++ H+G + GHYTA + TG +Y +DD+ V P+ Q+V
Sbjct: 410 AARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTD-TGSYYNFDDSYVRPIAMQSV 468
Query: 359 ESAEAEHGAYILVYQ 373
AYI+ Y+
Sbjct: 469 ----CNTNAYIMFYE 479
>gi|330802246|ref|XP_003289130.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
gi|325080797|gb|EGC34337.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
Length = 810
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 161/376 (42%), Gaps = 79/376 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTC++NSVLQCL+ +P N +++ + + +KS + + ++G
Sbjct: 183 GLNNIGNTCFMNSVLQCLTYSPTLANYMISREHSKNCTNKSFCIFCSLEEHIIASHKATG 242
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+ K I +R F +Q+D+ EF+ +++ +L KV ++ + S+ S
Sbjct: 243 RSIT-PKEIAANIRKVAPTFRIGRQEDSHEFIRFVIESL---QKVCLSKFPKGSISHRDS 298
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
+V IF G LRS V+CS C+ S ++ F +L
Sbjct: 299 M------------------TTVIGSIFGGYLRSQVKCSVCQYESNTFDPFMDL------- 333
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT-- 244
C + + +L + L F E L +
Sbjct: 334 --------------CVDINQ------------------ADSLTKGLQNFVKSEILDGSNR 361
Query: 245 --CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDMEYYIS 300
C CKK K +I PP+L + KRFS ++ KV I+F + L++ Y++
Sbjct: 362 YKCSKCKKLVKAAKRLQIHISPPILTVQIKRFSFLGSYGGKVNKHIQF-EQTLNLSPYMT 420
Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT-GRWYLYDDTVVSPVDAQTVE 359
+ YDL AV H+G + GHY YC +GT G WY DD++VS V QTV
Sbjct: 421 QAN----DHSIYDLYAVLVHLGGSTNSGHY--YCYVKGTNGIWYNMDDSMVSQVSLQTVL 474
Query: 360 SAEAEHGAYILVYQRR 375
++ AY+L Y +R
Sbjct: 475 GSK----AYMLFYSKR 486
>gi|323337845|gb|EGA79085.1| Ubp5p [Saccharomyces cerevisiae Vin13]
Length = 819
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 159/402 (39%), Gaps = 79/402 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
G+ N GN CY+N +LQCL T + L+ I S+G L + M
Sbjct: 447 GLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYLNFINFDSSRGSKGLLAKNFAILVNNM 506
Query: 63 WSSGNLVL-NTKAILLALRSYTK-------KFDGNQQQDAQEFLLYLLAALNEE-----A 109
G N + I + + K + + QQD QEF +LL L+E+ +
Sbjct: 507 HRHGAFTPPNVRTIPVQTIQFKKICGHINPMYSDSMQQDCQEFCQFLLDGLHEDLNQNGS 566
Query: 110 KVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRT 169
K Q + + AL WE+F T+ S D+F GQ S ++C C+ T
Sbjct: 567 KKHLKQLSDEEERMREKMSIRKASALE-WERFLLTDFSAIIDLFQGQYASRLQCQVCEHT 625
Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
ST Y+ F LS+PVP R C +
Sbjct: 626 STTYQTFSVLSVPVP---------------RVKTC----------------------NIL 648
Query: 230 ECLNKFFNGETL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSP 285
+C +F E L +C C K+ K +I RLP LI+ KRF N K
Sbjct: 649 DCFREFTKCERLGVDEQWSCPKCLKKQPSTKQLKITRLPKKLIINLKRF-DNQMNKNNVF 707
Query: 286 IKFPREGLDMEYYISAS-------GRRVESR-----YTYDLCAVSNHIGKTALY-GHYTA 332
+++P LD+ Y + + +R + Y L V+ H G +LY GHYT+
Sbjct: 708 VQYPYX-LDLTPYWARDFNHEAIVNEDIPTRGQVPPFRYRLYGVACHSG--SLYGGHYTS 764
Query: 333 YCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
Y + WY +DD++ P+ T + AY+L Y+R
Sbjct: 765 YVYKGPKKGWYFFDDSLYRPI---TFSTEFITPSAYVLFYER 803
>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 503
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 153/370 (41%), Gaps = 76/370 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY+N+ LQCL+ TP N +L++ L +F+ + S G
Sbjct: 57 GLQNMGNTCYMNATLQCLTYTPPLANYMLSQAHSQTCRPSGFCMLCAVETHFLWALHSPG 116
Query: 67 NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS 126
+++ +A+ A F N+Q+DA EFL++ + AL +A +P N
Sbjct: 117 DVIQPCQALAAA-------FHRNRQEDAHEFLVFTVDAL--KAAGLPGLMN--------- 158
Query: 127 KQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 186
VG + S+ IF G +S ++C C+ S + + +++L +
Sbjct: 159 -VVGP-----------KEDKSLSHQIFGGYWKSQIKCLQCQGVSDTLDPYLDIALDI--- 203
Query: 187 GGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNTCQ 246
K +V + +L P G YE C
Sbjct: 204 ------------------KTADSVQQALEQLVKPEELDGENAYE--------------CG 231
Query: 247 YCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS-ASGRR 305
C K++ K +Q VLI KRFS +K+ +++P E LDM Y+S SGR
Sbjct: 232 ICLKKTAASKTLVLQSSGNVLIFVLKRFSDFTGEKIARQVQYP-ECLDMRPYMSQQSGRP 290
Query: 306 VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEH 365
+E Y L A H+G GHY Y + G G WY DD V+ D +V
Sbjct: 291 LE----YVLYAALVHVGLRCQKGHYFCYV-KAGNGHWYKMDDAKVTACDITSV----LNQ 341
Query: 366 GAYILVYQRR 375
AY+L Y ++
Sbjct: 342 SAYVLFYVQK 351
>gi|260832998|ref|XP_002611444.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
gi|229296815|gb|EEN67454.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
Length = 349
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 153/388 (39%), Gaps = 85/388 (21%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
G+ N GNTCY NSVLQ L FR +L K + L+ L + + +
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKVLQ----YKAQPKKKETLLTCLSDLFHSIATQK 80
Query: 67 NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
V+ K + LR + FD QQDA EFL YLL + + + Q G ++
Sbjct: 81 KKVGVIAPKKFIARLRKENELFDNYMQQDAHEFLNYLLNTVADLLQAEKQQAKGINGTDN 140
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
++K ++ + DIF G L + RC C+ S+ E F +LS+ V
Sbjct: 141 NTK----------------SDPTWVHDIFQGTLTNETRCLCCETVSSKDEDFLDLSVDVD 184
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
+ TS + CL F N ETL +
Sbjct: 185 --------------------QNTSITH-------------------CLRGFSNTETLCSE 205
Query: 245 ----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPREGLDM 295
C+ C + + K +++LP +L L KRF +T K++ + FP L++
Sbjct: 206 YKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYT-KLSYRVVFP---LEL 261
Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
+ + S V + YDL AV H G GHY + G W L+DD +V +DA
Sbjct: 262 RLF-NTSDDAVNADKIYDLVAVVIHCGSGPNRGHYITIVKSHGF--WLLFDDDIVEKIDA 318
Query: 356 QTVES--------AEAEHGAYILVYQRR 375
+E + YIL YQ R
Sbjct: 319 HAIEDFYGLTSDIQKTSESGYILFYQSR 346
>gi|452837883|gb|EME39824.1| hypothetical protein DOTSEDRAFT_47375 [Dothistroma septosporum
NZE10]
Length = 513
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 178/416 (42%), Gaps = 93/416 (22%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE---DIPIHPDSKSQGQLVDALVNFMK 60
GL G N G TC+++ +LQ L + P R L E D + L D +F
Sbjct: 139 GLRGFYNMGQTCFMSVILQSLIHNPLIRAWYLCEGHKSSECERDCCTSCSLDDIFTDFFG 198
Query: 61 MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
G ++ +L A G QQDA EFL ++L +L+E
Sbjct: 199 SEKHEGYGAVH---MLQACWKGGGSLAGYSQQDAHEFLGFILDSLHE------------A 243
Query: 121 YSNTSSKQVGSFRALHYWEKFQTTE--ASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
+++ K+ G E + TE + F G +RS+V CS+CK T+T E F +
Sbjct: 244 NTDSEEKEAGD-------ETPKKTENCDCIIHQTFGGVMRSTVTCSDCKNTNTASEPFMD 296
Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
LSL + G + +L T+ V I + ++P+ L ECL++F +
Sbjct: 297 LSLDIKSTGFVTKKKKL---------ALTNAVQTI--KEAIPMD-----LRECLDRFTST 340
Query: 239 ETLHN---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ----KVTSPIKFPRE 291
ETL + TC+ C + +K + +LPPVL + KRF+ + T+ KV + I+FP
Sbjct: 341 ETLTSEDYTCRKCNAPKEAMKKLTLTQLPPVLPIHLKRFAHSKTKAESNKVNTTIRFPF- 399
Query: 292 GLDMEYYIS--------ASGRRVE---------------------------SRYTYDLCA 316
L+M ++S A+G + E + ++L +
Sbjct: 400 SLNMAPWLSKEAKAAKAANGHQAERNNDSDDGDTIDVKPKSGKEKKEDDEPQKPVFELSS 459
Query: 317 VSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
V H GK GHY +Y R+ W+ +DD V VD + V SAE AY+L Y
Sbjct: 460 VVVHKGKID-NGHYISYSRQ--GNEWFRFDDEKVVQVDEREVLSAE----AYMLFY 508
>gi|410988678|ref|XP_004000607.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 51-like [Felis catus]
Length = 667
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 165/389 (42%), Gaps = 60/389 (15%)
Query: 4 GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
GL G+ N GNTC++N ++Q L++ P ++ L++ S S LV + + M+
Sbjct: 317 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCVMTSPSLC-LVCEMSSLFHAMY 375
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S +L + + + G +QQDA EFL+ +L L+ +K D G +N
Sbjct: 376 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSVGQEANN 432
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
+ + IF G L+S V C C ST + W++SL +
Sbjct: 433 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 474
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
PG + Q S R + PG +L +CL F E L +
Sbjct: 475 -PGSCATFSSQSPEGAD-STVSRDDHI------------PGIPSLTDCLQWFTRPEYLGS 520
Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
+ C C+ + K +++LP V KRF Q K+ + I FP E LDM
Sbjct: 521 SAKIKCSSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 579
Query: 298 YISAS--GRRVESR---------YTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
+++++ R E + Y L AV NH G T GHYT++ R++ +W+ D
Sbjct: 580 FLASTKDSRMKEDQPPTDCTPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 637
Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
D +++ + + +E Y+L Y ++
Sbjct: 638 DAIITKATIEDLLYSE----GYLLFYHKQ 662
>gi|340506944|gb|EGR32981.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 778
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 2 SPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVN 57
+ G+ G+ N GNTC++NS LQCLSNT N ++I +QG+L
Sbjct: 145 AKGICGLVNLGNTCFMNSALQCLSNTKILTQFFFNKTYKQEINHTNPLGTQGKLAKKYSQ 204
Query: 58 FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
+K +W + + N I L + F GNQQ D+QEFL ++L L+E+ V ++ N
Sbjct: 205 LLKALWIKKSKIFNPIGIKLVISDLQYMFSGNQQHDSQEFLSFILDGLHEDLNRVKNKVN 264
Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
TY S + + + +W S+ D+ GQ +S V C C S ++ F
Sbjct: 265 --TYPINSDGRNDNIVSFEFWLNHIKRNQSIIVDLMQGQFKSKVTCPQCMYESVTFDPFL 322
Query: 178 ELSLPVP 184
SLP+P
Sbjct: 323 SCSLPIP 329
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 79/182 (43%), Gaps = 40/182 (21%)
Query: 227 TLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN---FT 279
+Y+CL F E L C C+K K I R P +LI KRF ++
Sbjct: 602 NIYDCLKLFEQPEKLQKNNEWYCHMCQKFQKATKQMTIYRAPDILIFHLKRFKTSAGTIK 661
Query: 280 QKVTSPIKFPREGLDMEYYI---------------------SASGRRVESRY-----TYD 313
K+T I FP + L+M Y+ S + +Y YD
Sbjct: 662 SKITKLIDFPLKNLNMTPYVIEKESPYVNYQNQQSQEQNLFQKSSFTLYDQYDKENLIYD 721
Query: 314 LCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
L AV+NH G +GHYTAY + EG WY +DD+ V ++ + S E +YIL Y+
Sbjct: 722 LYAVTNHYGSLG-FGHYTAYAKNEGF--WYRFDDSNVEKINNSIICSEE----SYILFYE 774
Query: 374 RR 375
R+
Sbjct: 775 RQ 776
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 156/372 (41%), Gaps = 74/372 (19%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQ--LVDALVNFMKMMWS 64
G+ N GNTC++NS LQCL+ T N + + H + Q ++ L +K +
Sbjct: 100 GLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGE---HNQTCKQPGFCMMCELQRHIKRCYE 156
Query: 65 SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNT 124
+ + +AIL L+ K +Q+DA EFL Y++ ++ + NG +
Sbjct: 157 NSGSNIKPQAILQKLKMIAKHMHWGRQEDAHEFLRYVVDSMQKSI------LNGHAKLDK 210
Query: 125 SSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP 184
SK E +V + IF G LRS V+C CK S Y+ F ++SL +
Sbjct: 211 FSK-----------------ETTVVNQIFGGYLRSQVQCLRCKEKSNTYDPFLDISLDI- 252
Query: 185 PGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT 244
K ++ + F + LP +C N +
Sbjct: 253 --------------------KTVPSLEKAFEKYVLP------EKLDCDNAYM-------- 278
Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-SNFTQ-KVTSPIKFPREGLDMEYYISAS 302
C CK++ +K + + + P VL + KRF S Q K+ + FP E L++ Y+S
Sbjct: 279 CNRCKQKVPALKRFSVHKPPNVLTVSLKRFDYSKMVQGKIGRHVHFP-EKLNLRPYMSNR 337
Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
G + L AV H G TA GHY Y + +G WY +D+ V V V AE
Sbjct: 338 GGEP---ILFHLNAVLVHSGYTANSGHYYCYV-KASSGSWYCMNDSNVQQVSVNRVLGAE 393
Query: 363 AEHGAYILVYQR 374
AY+L Y +
Sbjct: 394 ----AYVLFYTK 401
>gi|194376994|dbj|BAG63058.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 137/294 (46%), Gaps = 45/294 (15%)
Query: 86 FDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTE 145
F G QQQDA EF+ YLL L+ E + +NG + S + L K
Sbjct: 4 FRGYQQQDAHEFMRYLLDHLHLE---LQGGFNGVSRSAILQEN----STLSASNKCCING 56
Query: 146 AS-VFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNC 204
AS V + IF G L++ V C C S ++ F +LSL +P Q RS
Sbjct: 57 ASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPS--------QFRS------- 101
Query: 205 KRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEI 260
KR+ + + PV +L +CL F + E L T C CKK+ K + I
Sbjct: 102 KRSKN------QENGPVC----SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWI 151
Query: 261 QRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVS 318
Q+LP VL L KRF ++ KV + ++FP GLDM+ Y+ YDL AV
Sbjct: 152 QKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVV 211
Query: 319 NHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
H G GHYTAY E GRW+ ++D+ V+ D +TV A+ AYIL Y
Sbjct: 212 VHHGSGVGSGHYTAYATHE--GRWFHFNDSTVTLTDEETVVKAK----AYILFY 259
>gi|195174068|ref|XP_002027804.1| GL16307 [Drosophila persimilis]
gi|194115480|gb|EDW37523.1| GL16307 [Drosophila persimilis]
Length = 530
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 164/374 (43%), Gaps = 75/374 (20%)
Query: 7 GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ---GQLVDALVNFMKMMW 63
G+ N GNTCY+NS LQ L + PA N L++E + + ++ G ++ A+ ++
Sbjct: 173 GMINVGNTCYLNSTLQALFHIPALANWLVSEQTHLENCNITESNGGCIICAMAKTLQSTQ 232
Query: 64 SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
S + + I L+ K +Q+DA EFL +L+ A+ +
Sbjct: 233 SCQS-AMRPFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKA--------------- 276
Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
Y +F+ F ++ QL K T+ + +IF
Sbjct: 277 -------------YLMRFRN-----FKEL--DQL--------VKETTPLNQIF------- 301
Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
GG L RS VRC +C S ++ F +L L + TL E + +F+ E L +
Sbjct: 302 ---GGYL-----RSEVRCLSCSHVSITFQHFQDLLLDIRKSD-TLEEAFDGYFSRERLED 352
Query: 244 T---CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKF-PREGLDMEYYI 299
C+ CKK+ K + ++R P L + KRFS K+T I F PR +D+ +
Sbjct: 353 MGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM-IGNKLTKTISFKPR--IDLSRFA 409
Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
+ S TY L ++ H+G + GHYTA E +G +Y +DD+ V P+ Q+V
Sbjct: 410 ARSPAAAAQPLTYRLVSMVTHLGVSQHCGHYTAIGMTE-SGSYYNFDDSYVRPIAMQSV- 467
Query: 360 SAEAEHGAYILVYQ 373
AYI+ Y+
Sbjct: 468 ---CNTNAYIMFYE 478
>gi|449512111|ref|XP_002200230.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Taeniopygia guttata]
Length = 262
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 122/293 (41%), Gaps = 66/293 (22%)
Query: 86 FDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTE 145
F Q DAQEFL+ +L L+E K P Q S + S++ ++
Sbjct: 25 FSRRTQHDAQEFLICVLDDLHEAFKE-PSQERQSPAAGASTRS--------------SSG 69
Query: 146 ASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCK 205
S+ + +F GQL +RC CK S E F LSLP+P S+ CS
Sbjct: 70 TSIITHLFEGQLSYGIRCLTCKTLSDRPESFTILSLPIP------------STRVCS--- 114
Query: 206 RTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL----HNTCQYCKKQSDLVKLYEIQ 261
L +CL FF +TL C C D I
Sbjct: 115 ----------------------LQDCLECFFQPDTLTWNNQIRCHRCGSNQDATVKASIT 152
Query: 262 RLPPVLILWFKRFS--SNFTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSN 319
+ P ++I KRF+ +K+++ + +P LD+ YIS S + Y LCAV N
Sbjct: 153 KAPQIIIFHLKRFAWQDKHRRKLSTTVCYPFSHLDLSPYISTS---CHNNTEYSLCAVVN 209
Query: 320 HIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVY 372
H G YGHYTA+C+ T WY +DD V+ + +SA AY+L Y
Sbjct: 210 HAGDLD-YGHYTAFCKHSITKHWYSFDDDQVTKIP----DSAVQADTAYLLFY 257
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,037,855,132
Number of Sequences: 23463169
Number of extensions: 250168372
Number of successful extensions: 536105
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4492
Number of HSP's successfully gapped in prelim test: 4006
Number of HSP's that attempted gapping in prelim test: 501780
Number of HSP's gapped (non-prelim): 20383
length of query: 375
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 231
effective length of database: 8,980,499,031
effective search space: 2074495276161
effective search space used: 2074495276161
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)