BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy15062
         (375 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
           PE=2 SV=1
          Length = 357

 Score =  194 bits (494), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 191/381 (50%), Gaps = 59/381 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
           GL G+ N GNTC++NS+LQCLSNT   R+  L       ++ +S+ +  L+      +++
Sbjct: 17  GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQL 76

Query: 62  MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
           +W SS N  ++       ++ Y  +F G  QQDAQEFL +LL  L+ E    +V  + N 
Sbjct: 77  LWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRANA 136

Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
            T  +    +    ++   W ++Q  E S  SD+FVGQL+SS+ CS C   ST ++ FW+
Sbjct: 137 DTLDHLPDDE----KSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWD 192

Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
           LSLP+P  G                                    G  TL +CL  F   
Sbjct: 193 LSLPIPKKGY-----------------------------------GEVTLMDCLRLFTKE 217

Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
           + L      TC  CK ++   K + IQ+ P +L+L  KRFS    +  K+T+ + FP + 
Sbjct: 218 DVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKD 277

Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
           LD+  + S S         Y+L AVSNH G T + GHYTAYC+   +  W+ ++D+ V+P
Sbjct: 278 LDLREFASQSCNHA----VYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTP 332

Query: 353 VDAQTVESAEAEHGAYILVYQ 373
           + +  V S++    AY+L Y+
Sbjct: 333 MSSSHVRSSD----AYLLFYE 349


>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
           PE=1 SV=2
          Length = 605

 Score =  182 bits (463), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 187/384 (48%), Gaps = 65/384 (16%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
           GL G+ N GNTC++NS+LQCLSNT   R+  L       +H  S +   LV+     ++ 
Sbjct: 265 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQT 324

Query: 62  MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVP--DQYNG 118
           +W SS N V++       ++ Y  +F G  QQDAQEFL +LL  L+ E   V    + N 
Sbjct: 325 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNP 384

Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
               +    + G       W K+   E S   D+FVGQ                      
Sbjct: 385 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 418

Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
                           L+SS+ C++C   STV++ FW+LSLP+   G    TL +C+  F
Sbjct: 419 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLF 462

Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
              + L      TC  C+ +   +K + IQR P +L+L  KRFS +   T K+T+ + FP
Sbjct: 463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFP 522

Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
              LD+  + S +         Y+L AVSNH G T + GHYTAYCR  GTG W+ ++D+ 
Sbjct: 523 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSS 577

Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
           V+P+ +  V +++    AY+L Y+
Sbjct: 578 VTPMSSSQVRTSD----AYLLFYE 597


>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
           PE=1 SV=2
          Length = 613

 Score =  182 bits (461), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 190/381 (49%), Gaps = 59/381 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
           GL G+ N GNTC++NS+LQCLSNT   R+  L       +   S +   L++     ++ 
Sbjct: 273 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 332

Query: 62  MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS- 119
           +W SS N V++       ++ Y  +F G  QQDAQEFL +LL  L+ E   V  +   S 
Sbjct: 333 IWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASP 392

Query: 120 -TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
            T  +   ++ G       W K+   E S   D+FVGQL+SS+ C++C   STV++ FW+
Sbjct: 393 ETLDHLPDEEKGR----QMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 448

Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
           LSLP+   G                          + E+         TL +C+  F   
Sbjct: 449 LSLPIAKRG--------------------------YPEV---------TLMDCMRLFTKE 473

Query: 239 ETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREG 292
           + L      TC  C+ +   +K + +QR P +L+L  KRFS +   T K+T+ + FP   
Sbjct: 474 DILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRD 533

Query: 293 LDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
           LD+  + S +         Y+L AVSNH G T + GHYTAYCR   TG W+ ++D+ V+P
Sbjct: 534 LDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTP 588

Query: 353 VDAQTVESAEAEHGAYILVYQ 373
           + +  V +++    AY+L Y+
Sbjct: 589 MSSSQVRTSD----AYLLFYE 605


>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
           GN=Usp2 PE=1 SV=1
          Length = 618

 Score =  174 bits (441), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/382 (32%), Positives = 185/382 (48%), Gaps = 61/382 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
           GL G+ N GNTC++NS+LQCLSNT   R+  L       +   S +   L++     ++ 
Sbjct: 278 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQT 337

Query: 62  MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
           +W SS N V++       ++ Y  +F G  QQDAQEFL +LL  L+ E   V  +   S 
Sbjct: 338 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKPSP 397

Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
            S          R +  W K+   E S   D+FVGQ                        
Sbjct: 398 ESLDHLPDEEKGRQM--WRKYLEREDSRIGDLFVGQ------------------------ 431

Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFN 237
                         L+SS+ C++C   STV++ FW+LSLP+   G    TL +C+  F  
Sbjct: 432 --------------LKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMRLFTK 477

Query: 238 GETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFPRE 291
            + L      TC  C+ +   +K + +QR P +L+L  KRFS +   T K+T+ + FP  
Sbjct: 478 EDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 537

Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
            LD+  + S +         Y+L AVSNH G T + GHYTAYCR   TG W+ ++D+ V+
Sbjct: 538 DLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVT 592

Query: 352 PVDAQTVESAEAEHGAYILVYQ 373
           P+ +  V +++    AY+L Y+
Sbjct: 593 PMSSSQVRTSD----AYLLFYE 610


>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
           SV=1
          Length = 606

 Score =  167 bits (423), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 186/384 (48%), Gaps = 65/384 (16%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDI--PIHPDSKSQGQLVDALVNFMKM 61
           GL G+ N GNTC++NS+LQCLSNT   R+  L       +   S++   L++     ++ 
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQT 325

Query: 62  MW-SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQYNG 118
           +W SS N V++       ++ Y  +F G  QQDAQEFL +LL  L+ E    +   + N 
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVIARPKSNT 385

Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
               +    + G       W K+   E S   D+FVGQ                      
Sbjct: 386 ENLDHLPDDEKGR----QMWRKYLEREDSRIGDLFVGQ---------------------- 419

Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKF 235
                           L+SS+ C++C   STV++ FW+LSLP+   G    TL +C+  F
Sbjct: 420 ----------------LKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEVTLMDCMRLF 463

Query: 236 FNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQKVTSPIKFP 289
              + L      TC  C+ +   +K + IQR P +L+L  KRFS +   T K+T+ + FP
Sbjct: 464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFP 523

Query: 290 REGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTV 349
              LD+  + S +         Y+L AVSNH G T + GHYTAYCR   TG W+ ++D+ 
Sbjct: 524 LRDLDLREFASENTNHA----VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSS 578

Query: 350 VSPVDAQTVESAEAEHGAYILVYQ 373
           VSP+ +  V +++    AY+L Y+
Sbjct: 579 VSPMSSSQVRTSD----AYLLFYE 598


>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1
            SV=1
          Length = 1118

 Score =  162 bits (409), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 57/357 (15%)

Query: 3    PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
            P L G+ N GNTCY+NS+LQCL N P     F      +DI        +G++ +     
Sbjct: 774  PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 833

Query: 59   MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
            MK +W+     ++ K   + +     +F G  QQD+QE LL+L+  L+E+        N 
Sbjct: 834  MKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKAD---NR 890

Query: 119  STYSNTSSKQVGSFRAL-HYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
              Y   ++  +  F+A  H W+K +    S+   +F GQ +                   
Sbjct: 891  KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFK------------------- 931

Query: 178  ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFF 236
                               S+V+C  C + S  +E F  LSLP+      TL +CL  F 
Sbjct: 932  -------------------STVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972

Query: 237  NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPR 290
              E L +     C +C+ + D +K  EI +LPPVL++  KRFS    + QK+ + + FP 
Sbjct: 973  KEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPL 1032

Query: 291  EGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
            E LD+  Y+      ++    Y+L +VSNH G     GHYTAYC+     RW+ +DD
Sbjct: 1033 ENLDLSQYVIGPKNNLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1085


>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1
            SV=2
          Length = 1080

 Score =  162 bits (409), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 164/356 (46%), Gaps = 55/356 (15%)

Query: 3    PGLNGIANAGNTCYINSVLQCLSNTPA----FRNVLLNEDIPIHPDSKSQGQLVDALVNF 58
            P L G+ N GNTCY+NS+LQCL N P     F      +DI        +G++ +     
Sbjct: 736  PALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGII 795

Query: 59   MKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
            MK +W+     ++ K   + +     +F G+ QQD+QE LL+L+  L+E+     ++   
Sbjct: 796  MKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRH 855

Query: 119  STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
               +N     + +  A H W+K +    S+   +F GQ +                    
Sbjct: 856  KEENNEHLDDLQA--AEHAWQKHKQLNESIIVALFQGQFK-------------------- 893

Query: 179  LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG-TLYECLNKFFN 237
                              S+V+C  C+R S  +E F  LSLP+      TL +CL  F  
Sbjct: 894  ------------------STVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSK 935

Query: 238  GETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS--SNFTQKVTSPIKFPRE 291
             E L +     C +C+ + D +K  EI +LPPVL++  KRFS    + QK+ + + FP E
Sbjct: 936  EEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995

Query: 292  GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDD 347
             LD+  Y+      ++    Y+L +VSNH G     GHYTAYC+     RW+ +DD
Sbjct: 996  NLDLSQYVIGPKNSLKK---YNLFSVSNHYGGLD-GGHYTAYCKNAARQRWFKFDD 1047


>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
           PE=1 SV=1
          Length = 565

 Score =  159 bits (401), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 177/393 (45%), Gaps = 69/393 (17%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
           G  G+ N GNTC++N+VLQCLS+T   R+  L  D     P      +L +A  + +  +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query: 63  WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
           W   +   +N        + Y   F G  QQDAQEFL  L+  L+ E      +  P   
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329

Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
           NG   S    ++ G+           RA   W+++   E S   D+FVGQL+S ++C  C
Sbjct: 330 NGPVPS--PPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387

Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
              ST +E+F +LSLP+P  G    +  LR                              
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417

Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQ 280
              +C N F   E L +     C  C++++   K   +QR P +L+L   RFS++    +
Sbjct: 418 ---DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIK 474

Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
           K +  + FP + L +  + S           Y L A+ NH G +  YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528

Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
            W++Y+D+ VSPV    V S+E     Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556


>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
           PE=1 SV=1
          Length = 566

 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 173/392 (44%), Gaps = 66/392 (16%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
           G  G+ N GNTC++N+VLQCLS+T   R+  L  D     P      +L +A  + +  +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query: 63  WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
           W   +   +N        + Y   F G  QQDAQEFL  L+  L    N   +  P    
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329

Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
                +   +  G+           RA   W+++   E S   D+FVGQL+S ++C  C 
Sbjct: 330 SGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 389

Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
             ST +E+F +LSLP+P  G    +  LR                               
Sbjct: 390 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 418

Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQK 281
             +C + F   E L +     C  C++++   K   +QR P +L+L   RFS++    +K
Sbjct: 419 --DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKK 476

Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
            +  + FP + L +  + S           Y L A+ NH G +  YGHYTA CR + TG 
Sbjct: 477 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 529

Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
           W++Y+D+ VSPV    V S+E     Y+L YQ
Sbjct: 530 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 557


>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
           PE=2 SV=1
          Length = 565

 Score =  154 bits (390), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 175/392 (44%), Gaps = 67/392 (17%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
           G  G+ N GNTC++N++LQCLS+T   R+  L  D     P      +L +A  + +  +
Sbjct: 210 GHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query: 63  WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAAL----NEEAKVVPDQYN 117
           W   +   +N        + Y   F G  QQDAQEFL  L+  L    N   +  P    
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPIL- 328

Query: 118 GSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCK 167
            S+ +    +  G+           RA   W+++   E S   D+FVGQL+S ++C  C 
Sbjct: 329 ASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACG 388

Query: 168 RTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGT 227
             ST +E+F +LSLP+P  G    +  LR                               
Sbjct: 389 YRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------- 417

Query: 228 LYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQK 281
             +C N F   E L +     C  C++++   K   +QR P +L+L   RFS++    +K
Sbjct: 418 --DCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKK 475

Query: 282 VTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGR 341
            +  + FP + L +  + S           Y L A+ NH G +  YGHYTA CR + TG 
Sbjct: 476 SSVGVDFPLQRLSLGDFASDKA----GSPVYQLYALCNHSG-SVHYGHYTALCRCQ-TG- 528

Query: 342 WYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
           W++Y+D+ VSPV    V S+E     Y+L YQ
Sbjct: 529 WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556


>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
           GN=Usp21 PE=2 SV=1
          Length = 565

 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 180/393 (45%), Gaps = 69/393 (17%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIH-PDSKSQGQLVDALVNFMKMM 62
           G  G+ N GNTC++N+VLQCLS+T   R+  L  D     P      +L +A  + +  +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query: 63  WSSGNL-VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE-----AKVVPDQY 116
           W   +   +N        + Y   F G  QQDAQEFL  L+  L+ E      +  P   
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILA 329

Query: 117 NGSTYSNTSSKQVGSF----------RALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNC 166
           +G   S    ++ G+           RA   W+++   E S   D+FVGQL+S ++C  C
Sbjct: 330 SGPVPS--PPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQAC 387

Query: 167 KRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGG 226
              ST +E+F +LSLP+P  G    +  LR                              
Sbjct: 388 GYRSTTFEVFCDLSLPIPKKGFAGGKVSLR------------------------------ 417

Query: 227 TLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNF--TQ 280
              +C + F   E L +     C  C++++   K   +QR P +L+L   RFS++    +
Sbjct: 418 ---DCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIK 474

Query: 281 KVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
           K +  + FP + L +  + S    +V S   Y L A+ NH G +  YGHYTA CR + TG
Sbjct: 475 KSSVGVDFPLQRLSLGDFASD---KVGS-PVYQLYALCNHSG-SVHYGHYTALCRCQ-TG 528

Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQ 373
            W++Y+D+ VSPV    V S+E     Y+L YQ
Sbjct: 529 -WHVYNDSRVSPVSENQVASSE----GYVLFYQ 556


>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
           fascicularis GN=USP50 PE=2 SV=1
          Length = 373

 Score =  142 bits (358), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 172/379 (45%), Gaps = 65/379 (17%)

Query: 2   SPGLNGIANAGNTCYINSVLQCL-SNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMK 60
           S G+ G+ N GNTCY+N++LQCL S +P     L  + I    +  S+  +  A    M 
Sbjct: 40  SQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDCSE--VATAFAYLMT 97

Query: 61  MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
            MW   +  ++ +    AL +    F    QQDAQEFL+Y+L  L+E  K    +Y+   
Sbjct: 98  DMWLGDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEALK----KYH--- 150

Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
           Y    S + GS  A     K+ TTE SV + +F GQ                        
Sbjct: 151 YPRRRSHEKGS--AQRCCRKWITTETSVITQLFEGQ------------------------ 184

Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGE 239
                         L  S+ C  C++ +   E+F  LSLP+P     +L +CL  FF  +
Sbjct: 185 --------------LNYSIVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQD 230

Query: 240 TL----HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGL 293
           TL       C +C+ + +      I + P ++I   KRF    T  +K+ + I +P   L
Sbjct: 231 TLTWNNQIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNL 290

Query: 294 DMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPV 353
           D+  YI    R+      Y+LCAV NH G     GHYTA+C+   T  WY +DDT VS +
Sbjct: 291 DLTPYICPIFRKYPK---YNLCAVVNHFGDLDG-GHYTAFCKNSFTQAWYSFDDTRVSEI 346

Query: 354 DAQTVESAEAEHGAYILVY 372
              +V++A     AY+L Y
Sbjct: 347 PDTSVQNA----TAYLLFY 361


>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
           GN=Usp50 PE=2 SV=1
          Length = 390

 Score =  138 bits (348), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 162/376 (43%), Gaps = 65/376 (17%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           G+ G+ N GNTCY+N++LQCL +        L+    I    K   ++  A    M  MW
Sbjct: 43  GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKY-ITALKKDCSEVTTAFAYLMTDMW 101

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
              +  ++ +  L A+ S    F    QQDAQEFL+Y+L  L+E  K             
Sbjct: 102 LGDSDCVSPEIFLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALK-------KHCRRR 154

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            + K+ G         K    E S+ + +F GQ                           
Sbjct: 155 VNEKRTGQ----SCCRKVPAQETSIITRLFEGQ--------------------------- 183

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG-GGTLYECLNKFFNGETL- 241
                      L  S+ C  C+  +   E+F  LSLP+P     +L +CL  FF  +TL 
Sbjct: 184 -----------LSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQQDTLT 232

Query: 242 ---HNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDME 296
                 C +C+ + +      I ++P +++  FKRF    T  +K+ + I +P   LD+ 
Sbjct: 233 WSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDIHYPLTNLDLT 292

Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
            YI    R+      Y+LCAV NH G     GHYTA+C+   T  WY +DDT VS +   
Sbjct: 293 PYICPVFRK---HPMYNLCAVVNHFGDLD-GGHYTAFCKNSVTQAWYSFDDTRVSEIPDT 348

Query: 357 TVESAEAEHGAYILVY 372
           +V++A     AY+L Y
Sbjct: 349 SVQTA----TAYLLFY 360


>sp|A7TGY3|UBP4_VANPO Ubiquitin carboxyl-terminal hydrolase 4 OS=Vanderwaltozyma
           polyspora (strain ATCC 22028 / DSM 70294) GN=DOA4 PE=3
           SV=1
          Length = 882

 Score =  126 bits (317), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 168/403 (41%), Gaps = 79/403 (19%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLN----EDIPIHPDSKSQGQLVDALVNFMKMM 62
           G+ N GN+CY+N ++QCL +T     + LN    + I ++    S+G L       +  M
Sbjct: 520 GLENMGNSCYMNCIIQCLLSTHELSQIFLNNSYEKHINLNSKLGSKGVLAKYFARLVHTM 579

Query: 63  WSSG--------NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV-- 112
           +  G        N  +      +A  S    F  N QQD+QEF  +LL  L+E+      
Sbjct: 580 YREGSFKRPLEKNKPIQPIQFKMACGSINSLFKDNTQQDSQEFCQFLLDGLHEDLNQCGA 639

Query: 113 --PDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTS 170
             P +           K      +   WE+F TT+ SV  D+F GQ  S ++C  C  TS
Sbjct: 640 NPPLKELSEDAEKMREKLSMRIASSIEWERFLTTDFSVIVDLFQGQYASQLKCKVCGCTS 699

Query: 171 TVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYE 230
           T Y+ F  LS+PVP                 S+C                       + +
Sbjct: 700 TTYQTFSVLSVPVP---------------HVSSCH----------------------ILD 722

Query: 231 CLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPI 286
           C N+F   E L      +C  CKK+    K   I RLP  LI+  KRF  N   K    +
Sbjct: 723 CFNEFTKVEKLGTDELWSCPTCKKKQPSTKKLTITRLPRNLIIHLKRF-DNMMNKNNVFV 781

Query: 287 KFPREGLDMEYYISA--SGR-------RVESR-----YTYDLCAVSNHIGKTALY-GHYT 331
           K+P   LD+  Y +    GR        + +R     + Y L AV++H+G  +LY GHYT
Sbjct: 782 KYPF-LLDLTPYWANDFDGRLPPGVTDELPTRGQVPPFRYKLNAVASHVG--SLYGGHYT 838

Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
           AY  +     W+ +DDT   P+     E+      AY+L Y R
Sbjct: 839 AYVNKGINRGWHYFDDTSYRPIKN---ETECITPNAYVLFYHR 878


>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3
           PE=1 SV=2
          Length = 520

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 174/389 (44%), Gaps = 63/389 (16%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
           G+ N GNTC++N++LQ LSN   F            RN         H  ++SQG     
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDNNVS 217

Query: 51  LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
           LV+     +  +W       + +++   +      F G QQQDA EF+ YLL  L+ E  
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275

Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
            +   +NG + S    +       L    K     AS V + IF G L++ V C  C   
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330

Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
           S  ++ F +LSL +P         Q RS       KR+        + + PV     +L 
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365

Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
           +CL  F + E L  T    C  CKK+    K + IQ+LP VL L  KRF  ++    KV 
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 425

Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
           + ++FP  GLDM+ Y+            YDL AV  H G     GHYTAY   E  GRW+
Sbjct: 426 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 483

Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVY 372
            ++D+ V+  D +TV  A+    AYIL Y
Sbjct: 484 HFNDSTVTLTDEETVVKAK----AYILFY 508


>sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3
           PE=2 SV=1
          Length = 520

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 174/392 (44%), Gaps = 63/392 (16%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAF------------RNVLLNEDIPIHPDSKSQGQ---- 50
           G+ N GNTC++N++LQ LSN   F            RN         H  ++SQG     
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYH--TRSQGDSNVS 217

Query: 51  LVDALVNFMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
           LV+     +  +W       + +++   +      F G QQQDA EF+ YLL  L+ E  
Sbjct: 218 LVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLE-- 275

Query: 111 VVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEAS-VFSDIFVGQLRSSVRCSNCKRT 169
            +   +NG + S    +       L    K     AS V + IF G L++ V C  C   
Sbjct: 276 -LQGGFNGVSRSAILQEN----STLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTE 330

Query: 170 STVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 229
           S  ++ F +LSL +P         Q RS       KR+        + + PV     +L 
Sbjct: 331 SRKFDPFLDLSLDIPS--------QFRS-------KRSKN------QENGPV----CSLR 365

Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
           +CL  F + E L  T    C  CKK+    K + IQ+LP  L L  KRF  ++    KV 
Sbjct: 366 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVD 425

Query: 284 SPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWY 343
           + ++FP  GLDM+ Y+            YDL AV  H G     GHYTAY   E  GRW+
Sbjct: 426 TYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWF 483

Query: 344 LYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
            ++D+ V+  D +TV  A+    AYIL Y  R
Sbjct: 484 HFNDSTVTVTDEETVGKAK----AYILFYVER 511


>sp|Q8R5K2|UBP33_MOUSE Ubiquitin carboxyl-terminal hydrolase 33 OS=Mus musculus GN=Usp33
           PE=1 SV=2
          Length = 909

 Score =  122 bits (306), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 125/255 (49%), Gaps = 41/255 (16%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG--GTLYECQLRSSVRCSNC 204
           SV SDIF G + SSV+C  C R S   E F +LSLP+P       L+     + V+  +C
Sbjct: 441 SVISDIFDGTVISSVQCLTCDRVSITLETFQDLSLPIPGKEDLAKLHSSSHPTIVKAGSC 500

Query: 205 -----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN-- 243
                            KR   S V   FW    PV     TL +CL  FF  + L    
Sbjct: 501 GEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDELKGDN 553

Query: 244 --TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYI 299
             +C+ CKK  + VK  ++Q+ P +L +  KRF     F+ K+++ + FP EGLD++ ++
Sbjct: 554 MYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL 613

Query: 300 SASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVE 359
           +          TYDL +V  H G TA  GHY AYCR      WY +DD  V+ V   TV+
Sbjct: 614 AKDSPA--QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670

Query: 360 SAEAEHGAYILVYQR 374
           +AE    AY+L Y++
Sbjct: 671 NAE----AYVLFYRK 681



 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTCY+N+ LQ LSN P      L+       D K    +  + +  M  +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209

Query: 64  SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                G++V     +   +++    F G  QQDAQEFL  L+  L+EE K
Sbjct: 210 HKSRPGSVV--PANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257


>sp|Q5REG5|UBP33_PONAB Ubiquitin carboxyl-terminal hydrolase 33 OS=Pongo abelii GN=USP33
           PE=2 SV=1
          Length = 914

 Score =  122 bits (306), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 127/259 (49%), Gaps = 48/259 (18%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
           SV SDIF G + SSV+C  C R S   E F +LSLP+P   G     +L SS      V+
Sbjct: 441 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 497

Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
             +C                 KR   S V   FW    PV     TL +CL  FF  + L
Sbjct: 498 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 550

Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
                 +C+ CKK  + VK  ++Q+ P +L +  KRF     F+ K+++ + FP EGLD+
Sbjct: 551 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 610

Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
           + +++          TYDL +V  H G TA  GHY AYCR      WY +DD  V+ V  
Sbjct: 611 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 667

Query: 356 QTVESAEAEHGAYILVYQR 374
            TV++AE    AY+L Y++
Sbjct: 668 STVQNAE----AYVLFYRK 682



 Score = 60.5 bits (145), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTCY+N+ LQ LSN P      L+       D K    +  + +  M  +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209

Query: 64  SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                G++V     +   +++    F G  QQDAQEFL  L+  L+EE K
Sbjct: 210 HKSRPGSVVPTN--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257


>sp|A6QNM7|UBP33_BOVIN Ubiquitin carboxyl-terminal hydrolase 33 OS=Bos taurus GN=USP33
           PE=2 SV=1
          Length = 912

 Score =  122 bits (305), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 129/259 (49%), Gaps = 48/259 (18%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
           SV SDIF G + SSV+C  C R S   E F +LSLP+P   G     +L SS      V+
Sbjct: 443 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 499

Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
             +C                 KR   S V   FW    PV     TL +CL  FF  + L
Sbjct: 500 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 552

Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
                 +C+ CKK  + VK  ++Q+ P +L +  KRF     F+ K+++ + FP EGLD+
Sbjct: 553 KGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 612

Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
           + ++ A    V+   TYDL +V  H G TA  GHY AYCR      WY +DD  V+ V  
Sbjct: 613 QPFL-AKDSPVQI-VTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 669

Query: 356 QTVESAEAEHGAYILVYQR 374
            TV++AE    AY+L Y++
Sbjct: 670 STVQNAE----AYVLFYRK 684



 Score = 62.8 bits (151), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTCY+N+ LQ LSN P      L+       D K    +  + +  M  +W
Sbjct: 152 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 209

Query: 64  SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                G++V  T  +   +++    F G  QQDAQEFL  L+  L+EE K
Sbjct: 210 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 257


>sp|Q8TEY7|UBP33_HUMAN Ubiquitin carboxyl-terminal hydrolase 33 OS=Homo sapiens GN=USP33
           PE=1 SV=2
          Length = 942

 Score =  121 bits (304), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 48/259 (18%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS------VR 200
           SV SDIF G + SSV+C  C R S   E F +LSLP+P   G     +L SS      V+
Sbjct: 473 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIP---GKEDLAKLHSSSHPTSIVK 529

Query: 201 CSNC-----------------KR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
             +C                 KR   S V   FW    PV     TL +CL  FF  + L
Sbjct: 530 AGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWG---PV----VTLQDCLAAFFARDEL 582

Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
                 +C+ CKK  + VK  ++Q  P +L +  KRF     F+ K+++ + FP EGLD+
Sbjct: 583 KGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDL 642

Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
           + +++          TYDL +V  H G TA  GHY AYCR      WY +DD  V+ V  
Sbjct: 643 QPFLAKDS--PAQIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSE 699

Query: 356 QTVESAEAEHGAYILVYQR 374
            TV++AE    AY+L Y++
Sbjct: 700 STVQNAE----AYVLFYRK 714



 Score = 62.4 bits (150), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTCY+N+ LQ LSN P      L+       D K    +  + +  M  +W
Sbjct: 183 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKP--AICKSYLKLMTELW 240

Query: 64  SS---GNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                G++V  T  +   +++    F G  QQDAQEFL  L+  L+EE K
Sbjct: 241 HKSRPGSVVPTT--LFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELK 288


>sp|A6H8I0|UBP22_DANRE Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22
           PE=2 SV=1
          Length = 506

 Score =  120 bits (302), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 171/404 (42%), Gaps = 91/404 (22%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTC++N ++Q L++TP  R+  L++        K + Q    LV  M  ++
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSD------RHKCEMQSNSCLVCEMSQLF 210

Query: 64  S---SGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGS 119
               SG+   +    LL L  ++ +   G +QQDA EFL+  L  L+   K      NG 
Sbjct: 211 QEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK----DDNGK 266

Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWEL 179
             +N +                      +   IF G L+S V C  C   ST  + FW++
Sbjct: 267 KANNPNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDI 308

Query: 180 SLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSL----------PVPPGGGTLY 229
           SL + PG  T                        FW LS             P G  TL 
Sbjct: 309 SLDL-PGSST-----------------------PFWPLSPGSDGSVVNGDSHPSGATTLT 344

Query: 230 ECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVT 283
           +CL +F   E L ++    C  C    +  K   ++RLP V     KRF  S+   +K+T
Sbjct: 345 DCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRRKIT 404

Query: 284 SPIKFPREGLDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYT 331
           + + FP E LDM  ++++S   R+  +Y            Y L AV NH G T   GHYT
Sbjct: 405 TYVSFPLE-LDMTPFMASSKESRMNGQYQQPVDSLNNDNKYSLFAVVNHQG-TLESGHYT 462

Query: 332 AYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
            + R+    +W+  DD +++    + V  +E     Y+L Y ++
Sbjct: 463 TFIRQH-KDQWFKCDDAIITKASIKDVLDSE----GYLLFYHKQ 501


>sp|A6ZY34|UBP4_YEAS7 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
           (strain YJM789) GN=DOA4 PE=3 SV=1
          Length = 926

 Score =  119 bits (298), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
           G+ N GN+CY+N ++QC+  T     + L++     I I+    S+G L       + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622

Query: 63  WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
           +      S  + ++     LA  S    F    QQD QEF  +LL  L+E+         
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682

Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
               S  +   ++  S R      WE+F TT+ SV  D+F GQ  S ++C  C  TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742

Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
           + F  LS+P+P           R+++   +C R  T                    +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775

Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
              + + L   C +CKK+    K   I RLP  LI+  KRF  N   K    + +P    
Sbjct: 776 LEVDEQWL---CPHCKKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831

Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
                    D  +    +   +  R     + Y+L  V+ H G T   GHYTAY ++   
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890

Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
             W  +DDT   PV  +    A+A    AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922


>sp|A5PMR2|UBP33_DANRE Ubiquitin carboxyl-terminal hydrolase 33 OS=Danio rerio GN=usp33
           PE=2 SV=1
          Length = 897

 Score =  119 bits (298), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 127/258 (49%), Gaps = 40/258 (15%)

Query: 140 KFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS- 198
           K Q    S+ S++F G + SSV+C  C R S   E F ++SLP+P   G     +L SS 
Sbjct: 429 KRQRKYHSIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIP---GKEDLAKLHSSS 485

Query: 199 -----VRCSNCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLH 242
                V+  +C                +   FW    PV     TL +CL  FF  + L 
Sbjct: 486 HQTALVKAGSCGEAYAPQGWIAFVMEYIKSWFWG---PV----VTLQDCLAAFFARDELK 538

Query: 243 N----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDME 296
                +C+ CKK  + VK  ++Q LP +L +  KRF     F+ K+ + + FP EGL+M+
Sbjct: 539 GDNMYSCEKCKKLRNGVKFCKVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQ 598

Query: 297 YYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQ 356
            +++     + +  TYDL +V  H G TA  GHY AYCR E    WY +DD  V+ V   
Sbjct: 599 PFLAKDSSALTT--TYDLLSVICHHG-TASSGHYIAYCRNELNQLWYEFDDQSVTEVSES 655

Query: 357 TVESAEAEHGAYILVYQR 374
            V++AE    AY+L Y++
Sbjct: 656 CVQNAE----AYVLFYKK 669



 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 10/152 (6%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTCY+N+ LQ LSN P      L     +  D K    L  +    +  +W
Sbjct: 154 GLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKP--ALCKSYQKLITDLW 211

Query: 64  SSG-NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV---PDQYNGS 119
               N  +    +   +++    F G  QQD+QEFL  L+  L+EE K +   P+  N +
Sbjct: 212 HKNRNAYVVPTNLFQGIKAVNPMFRGYSQQDSQEFLRCLMDQLHEELKELIPEPEDPNQA 271

Query: 120 TYSNTSSKQVGSFRALHYWEKFQTTEASVFSD 151
              + S  +    ++    + FQ+ E+   SD
Sbjct: 272 VAMDDSPDEDNHSQS----DDFQSCESCGSSD 299


>sp|Q9HFS7|UBP4_KLULA Ubiquitin carboxyl-terminal hydrolase 4 OS=Kluyveromyces lactis
           (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
           NRRL Y-1140 / WM37) GN=DOA4 PE=3 SV=1
          Length = 796

 Score =  119 bits (298), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 167/411 (40%), Gaps = 93/411 (22%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKS----QGQLVDALVNFMKMM 62
           G+ N GN+CY+N ++QCL        + L      H +  S    +G L +     ++ M
Sbjct: 433 GLVNLGNSCYLNCIIQCLLGCHELSYIFLTNSYRKHVNVNSRLGSKGLLANYFSQLVQKM 492

Query: 63  WSSGNL-----------VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE--- 108
           +  G L            ++     LA  S    F G QQQD QEF  +LL  L+E+   
Sbjct: 493 YQQGKLQAYNNTNMESTAVHPTQFKLACGSINSLFKGKQQQDCQEFCQFLLDGLHEDLNQ 552

Query: 109 -------AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSV 161
                   ++ P+         T   ++ S  A+  WE++ TT+ SV  D+F GQ  S +
Sbjct: 553 CGTNPPLKELSPE---AEKMRETMPMRIAS--AIE-WERYLTTDFSVIVDLFQGQYASQL 606

Query: 162 RCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPV 221
           RC  C  TST Y+ F  LS+PVP               R  +C                 
Sbjct: 607 RCKICAHTSTTYQAFSVLSVPVP---------------RARSC----------------- 634

Query: 222 PPGGGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN 277
                T+Y+C  +F   ETL       C YCK++    K   I RLP  LI+  KRF  N
Sbjct: 635 -----TIYDCFKEFTKLETLEKDELWYCPYCKQRQPSTKQIIITRLPNNLIIHLKRF-DN 688

Query: 278 FTQKVTSPIKFPREGLDMEYY--------------ISASGRRVESRYTYDLCAVSNHIGK 323
              K    + +P E LD+  +              +S   R  +  + Y L AV++H G 
Sbjct: 689 MMNKNNVFVNYPNE-LDLTGFWIDDYNGEMPKDNGVSLPLRGQKPPFNYRLFAVASHSG- 746

Query: 324 TALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
           T   GHYT++  +   G W  +DD     +  +          AY+L Y+R
Sbjct: 747 TLYGGHYTSFVDKGRVG-WCSFDDVSWRKIRRK---DEYITPNAYVLFYRR 793


>sp|Q7ZUM8|UBP44_DANRE Ubiquitin carboxyl-terminal hydrolase 44 OS=Danio rerio GN=usp44
           PE=2 SV=1
          Length = 695

 Score =  119 bits (297), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 170/443 (38%), Gaps = 116/443 (26%)

Query: 1   MSPGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIP-------------------- 40
           ++PG+ G+ N GNTCY+NS+LQ LS+   FR   L  D+                     
Sbjct: 290 VTPGVTGLRNLGNTCYMNSILQVLSHLHVFRECFLRLDLNQALELLASAVSRKLGLSAQR 349

Query: 41  -IHPDSKSQGQ--------------------------LVDALVNFMKMMWSSGNLVLNTK 73
            I P   +QG                           L   L     +MWS    +++  
Sbjct: 350 VIQPKGLNQGSGLSGGASRSRNMELIQPKEPSSKHISLCHELHTLFPVMWSGKWALVSPF 409

Query: 74  AILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSNTSS--KQVGS 131
           A+L ++      F G  QQDAQEFL  LL  +  E +        +  +N     KQV  
Sbjct: 410 AMLHSVWQLIPAFRGYAQQDAQEFLCELLDKVQHELERTRTLTPATVPANQRRLIKQV-- 467

Query: 132 FRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLY 191
                          SV + IF GQL S VRC  C   S   E FW+LSL  P      Y
Sbjct: 468 --------------LSVVNTIFHGQLLSQVRCLACDHRSNTIEPFWDLSLEFP----ERY 509

Query: 192 ECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN---TCQYC 248
                     SN K  + V            P G  L E L KF   E L      C YC
Sbjct: 510 H---------SNSKDAAQV------------PCG--LTEMLAKFTETEALEGAIYACDYC 546

Query: 249 KKQ-----SDLVKLYEIQ------RLPPVLILWFKRF---SSNFTQKVTSPIKFPREGLD 294
             +     S  V L E Q      +LP VL L  KRF     N  +K+   ++F +E L+
Sbjct: 547 NNKRRRFCSKQVVLTEAQKQLMVHKLPHVLRLHLKRFRWSGRNHREKIGVHVQFEQE-LN 605

Query: 295 MEYYISASGRRV--ESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSP 352
           ME Y       +     + Y L AV  H GK    GHYTA+C     G W   +D+ +S 
Sbjct: 606 MEPYCCKDSGNLPHPQHFLYQLSAVVMHHGKGFGSGHYTAFCYNTEGGFWVHCNDSKLSV 665

Query: 353 VDAQTVESAEAEHGAYILVYQRR 375
              + V  A+    AYIL Y +R
Sbjct: 666 CAVEEVCKAQ----AYILFYTQR 684


>sp|Q754R5|UBP4_ASHGO Ubiquitin carboxyl-terminal hydrolase 4 OS=Ashbya gossypii (strain
           ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
           GN=DOA4 PE=3 SV=2
          Length = 852

 Score =  118 bits (296), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 168/409 (41%), Gaps = 90/409 (22%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
           G+ N GN+CY++ ++QCL  T     + LN      I ++    S+G L       +  M
Sbjct: 489 GLVNCGNSCYMSCIIQCLLGTQELCTMFLNNSYQNHINLNSRLGSKGLLARYFSQLIHQM 548

Query: 63  WSSGNLVL----NTKAILL------ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVV 112
           +  G  +     N K  ++      A  S    F  N QQD QEF  +LL  L+E+    
Sbjct: 549 YQYGKDIRKKMGNEKTAVIPTQFKIACGSINSSFKDNTQQDCQEFCQFLLDGLHEDL--- 605

Query: 113 PDQYNGSTYSNTSSKQVGSFRALH--------YWEKFQTTEASVFSDIFVGQLRSSVRCS 164
            +Q   +      S++    R +          WE++ TT+ SV  D+F GQ  S ++C 
Sbjct: 606 -NQCGNNPPLKELSEEAEKMREMMPMRLASAIEWERYLTTDFSVIVDLFQGQYASQLQCK 664

Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
            C+RTST Y+ F  LS+PVP            S+  C                       
Sbjct: 665 VCQRTSTTYQPFSVLSVPVP------------STRTC----------------------- 689

Query: 225 GGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ 280
             TL +C  +F   ETL      +C  CKK+    K   I RLP  LI+  KRF  N   
Sbjct: 690 --TLTDCFTEFTKIETLEQEEQWSCPSCKKRQPSTKKITITRLPRNLIIHLKRF-DNMLN 746

Query: 281 KVTSPIKFPREGLDM------EYYISASGRRVE--SR-----YTYDLCAVSNHIGKTALY 327
           K    + +P   LD+      +Y    +   VE  SR     + Y L  ++ H G T   
Sbjct: 747 KNNVFVSYP-SVLDLTAFWANDYDKKVTNNNVELPSRGQVPPFNYQLYGIACHDG-TLRA 804

Query: 328 GHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEA--EHGAYILVYQR 374
           GHYTAY  +     W  YDDT     + + + SA       AY+L Y R
Sbjct: 805 GHYTAYVNKGAVLGWCYYDDT-----NWRQIRSAREYITQNAYVLFYHR 848


>sp|Q28CN3|UBP33_XENTR Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis
           GN=usp33 PE=2 SV=1
          Length = 892

 Score =  118 bits (295), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 121/249 (48%), Gaps = 36/249 (14%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSS----VRCS 202
           SV +DIF G + SSV+C  C R S   E F +LSLP+ PG   L +    S     V+  
Sbjct: 431 SVIADIFDGTIVSSVQCLTCDRVSVTLETFQDLSLPI-PGKEDLAKLHSSSHQSSLVKAG 489

Query: 203 NCKRT-----------STVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQY 247
           +C                    FW  ++       TL +CL  FF  + L      +C+ 
Sbjct: 490 SCGEAYAPQGWIAFFLEYFKSWFWGPTV-------TLQDCLAAFFARDELKGDNMYSCEK 542

Query: 248 CKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRR 305
           CKK  + VK  ++Q+ P +L +  KRF     F+ K+ + + FP EGLD++ +++     
Sbjct: 543 CKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPS 602

Query: 306 VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEH 365
                TYDL +V  H G TA  GHY AYCR      WY +DD  V+ V   TV++AE   
Sbjct: 603 --QIVTYDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQNAE--- 656

Query: 366 GAYILVYQR 374
            AY+L Y++
Sbjct: 657 -AYVLFYRK 664



 Score = 62.4 bits (150), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 60/140 (42%), Gaps = 10/140 (7%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTCY+N+ LQ LSN P   +  L+       D K    L  +    M  +W
Sbjct: 146 GLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDKKP--ALCKSYQKLMSDIW 203

Query: 64  SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK-----VVPDQY 116
                  V+ T  +   ++S    F G  QQDAQEFL  L+  L+EE K     V  D  
Sbjct: 204 HKNRPGFVIPTN-LFQGIKSVNPTFRGYSQQDAQEFLRCLMDVLHEELKEQIVEVEEDAQ 262

Query: 117 NGSTYSNTSSKQVGSFRALH 136
            G    N    +  S    H
Sbjct: 263 TGIVEENLDEDKSQSDNDFH 282


>sp|Q5DU02|UBP22_MOUSE Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22
           PE=2 SV=2
          Length = 525

 Score =  118 bits (295), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 168/390 (43%), Gaps = 61/390 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTC++N ++Q L++TP  R+  L++       S S   LV  + +  +  +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
           S          +L  + ++ +   G +QQDA EFL+  L  L+   K      NG   +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            +                      +   IF G L+S V C  C   ST  + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
           P      +     S     N +  ++              G  TL +CL +F   E L +
Sbjct: 332 PGSSTPFWPLSPGSEGSVVNGESHAS--------------GTTTLTDCLRRFTRPEHLGS 377

Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
           +    C  C    +  K   +++LP V     KRF  S+   +K+T+ + FP E LDM  
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436

Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
           ++++S   R+  +Y            Y L AV NH G T   GHYT++ R+    +W+  
Sbjct: 437 FMASSKESRMNGQYQQPLDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494

Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
           DD +++    + V  +E     Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520


>sp|P32571|UBP4_YEAST Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=DOA4 PE=1 SV=2
          Length = 926

 Score =  118 bits (295), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
           G+ N GN+CY+N ++QC+  T     + L++     I I+    S+G L       + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622

Query: 63  WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
           +      S  + ++     LA  S    F    QQD QEF  +LL  L+E+         
Sbjct: 623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682

Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
               S  +   ++  S R      WE+F TT+ SV  D+F GQ  S ++C  C  TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742

Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
           + F  LS+P+P           R+++   +C R  T                    +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775

Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
              + + L   C +C+K+    K   I RLP  LI+  KRF  N   K    + +P    
Sbjct: 776 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831

Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
                    D  +    +   +  R     + Y+L  V+ H G T   GHYTAY ++   
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890

Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
             W  +DDT   PV  +    A+A    AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922


>sp|B3LGK1|UBP4_YEAS1 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
           (strain RM11-1a) GN=DOA4 PE=3 SV=1
          Length = 926

 Score =  117 bits (294), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 164/396 (41%), Gaps = 64/396 (16%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNED----IPIHPDSKSQGQLVDALVNFMKMM 62
           G+ N GN+CY+N ++QC+  T     + L++     I I+    S+G L       + MM
Sbjct: 563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622

Query: 63  WS-----SGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
           +      S  + ++     LA  S    F    QQD QEF  +LL  L+E+         
Sbjct: 623 YKEQVDGSKKIPISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPP 682

Query: 118 GSTYSNTSS--KQVGSFRALHY--WEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVY 173
               S  +   ++  S R      WE+F TT+ SV  D+F GQ  S ++C  C  TST Y
Sbjct: 683 LKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTY 742

Query: 174 EIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLN 233
           + F  LS+P+P           R+++   +C R  T                    +C N
Sbjct: 743 QPFTVLSIPIPKKNS-------RNNITIEDCFREFT--------------------KCEN 775

Query: 234 KFFNGETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFP---- 289
              + + L   C +C+K+    K   I RLP  LI+  KRF  N   K    + +P    
Sbjct: 776 LEVDEQWL---CPHCEKRQPSTKQLTITRLPRNLIVHLKRF-DNLLNKNNDFVIYPFLLD 831

Query: 290 -----REGLDMEYYISASGRRVESR-----YTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
                    D  +    +   +  R     + Y+L  V+ H G T   GHYTAY ++   
Sbjct: 832 LTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFG-TLYGGHYTAYVKKGLK 890

Query: 340 GRWYLYDDTVVSPVDAQTVESAEA-EHGAYILVYQR 374
             W  +DDT   PV  +    A+A    AY+L Y R
Sbjct: 891 KGWLYFDDTKYKPVKNK----ADAINSNAYVLFYHR 922


>sp|Q9UPT9|UBP22_HUMAN Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22
           PE=1 SV=2
          Length = 525

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 61/390 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTC++N ++Q L++TP  R+  L++       S S   LV  + +  +  +
Sbjct: 174 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 232

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
           S          +L  + ++ +   G +QQDA EFL+  L  L+   K      NG   +N
Sbjct: 233 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 289

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            +                      +   IF G L+S V C  C   ST  + FW++SL +
Sbjct: 290 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 331

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
           P      +     S     N +   +              G  TL +CL +F   E L +
Sbjct: 332 PGSSTPFWPLSPGSEGNVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 377

Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
           +    C  C    +  K   +++LP V     KRF  S+   +K+T+ + FP E LDM  
Sbjct: 378 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 436

Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
           ++++S   R+  +Y            Y L AV NH G T   GHYT++ R+    +W+  
Sbjct: 437 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 494

Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
           DD +++    + V  +E     Y+L Y ++
Sbjct: 495 DDAIITKASIKDVLDSE----GYLLFYHKQ 520


>sp|A5PN09|UBP20_DANRE Ubiquitin carboxyl-terminal hydrolase 20 OS=Danio rerio GN=usp20
           PE=2 SV=1
          Length = 911

 Score =  116 bits (291), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 53/288 (18%)

Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
           G TY+   ++ + S +     +K Q+   SV SDIF G + S V+C  C R ST  E F 
Sbjct: 419 GPTYTFKKAQMLLSTK-----KKKQSRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQ 473

Query: 178 ELSLPVPPGGGTLYECQLRSSVR---------CSN--------------CKR--TSTVYE 212
           +LSLP+P   G     +L SS+          C++               +R   S +  
Sbjct: 474 DLSLPIP---GKEDLAKLHSSIHQSAPVKAGVCTDGYAAQGWISYIMDSIRRFVVSCIPS 530

Query: 213 IFWELSLPVPPGGGTLYECLNKFFNGETLHN----TCQYCKKQSDLVKLYEIQRLPPVLI 268
            FW   +       TL +CL  FF  + L      +C+ CKK  + VK  ++ RLP +L 
Sbjct: 531 WFWGPMV-------TLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILC 583

Query: 269 LWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISASGRRVESRYTYDLCAVSNHIGKTAL 326
           +  KRF     ++ K+ S + FP EGLD++ +++          TYDL +V  H G TA 
Sbjct: 584 IHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESP--SQITTYDLLSVICHHG-TAG 640

Query: 327 YGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
            GHY AYC+    G+WY +DD  V+ V    V++AE    AY+L Y++
Sbjct: 641 SGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE----AYVLFYRK 684



 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GN+CY+N+ LQ LSN P       +    +  D K    L  +    +  +W
Sbjct: 146 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFQDCSGLVRTDKKP--ALCKSYQKLISELW 203

Query: 64  SSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                       L   ++     F G  QQD QEFL  L+  L+EE K
Sbjct: 204 HKKRPSYVVPTTLFHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 251


>sp|P0C8Z3|UBP22_BOVIN Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22
           PE=2 SV=1
          Length = 514

 Score =  116 bits (291), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 166/390 (42%), Gaps = 61/390 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTC++N ++Q L++TP  R+  L++       S S   LV  + +  +  +
Sbjct: 163 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSC-LVCEMSSLFQEFY 221

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
           S          +L  + ++ +   G +QQDA EFL+  L  L+   K      NG   +N
Sbjct: 222 SGHRSPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 278

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            +                      +   IF G L+S V C  C   ST  + FW++SL +
Sbjct: 279 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 320

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
           P      +     S     N +   +              G  TL +CL +F   E L +
Sbjct: 321 PGSSTPFWPLSPGSESSVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 366

Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
           +    C  C    +  K   +++LP V     KRF  S+   +K+T+ + FP E LDM  
Sbjct: 367 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 425

Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
           ++++S   R+  +Y            Y L AV NH G T   GHYT++ R+    +W+  
Sbjct: 426 FMASSKESRMNGQYQQPTDSLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 483

Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
           DD +++      V  +E     Y+L Y ++
Sbjct: 484 DDAIITKASIADVLDSE----GYLLFYHKQ 509


>sp|Q70EL3|UBP50_HUMAN Inactive ubiquitin carboxyl-terminal hydrolase 50 OS=Homo sapiens
           GN=USP50 PE=2 SV=1
          Length = 339

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 157/344 (45%), Gaps = 56/344 (16%)

Query: 4   GLNGIANAGNTCYINSVLQCL-SNTPAFRNVLLNEDIP-----IHPDSKSQGQLVDALVN 57
           G+ G+ N GNTC +N++ QCL S  P     L  + I      + P   S+  +  A   
Sbjct: 42  GVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQKFLLPSDCSE--VATAFAY 99

Query: 58  FMKMMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYN 117
            M  MW   +  ++ +    AL +    F    QQDAQEFL+ +L  L+E  K    +Y+
Sbjct: 100 LMTDMWLGDSDCVSPEIFWSALGNLYPAFTKKMQQDAQEFLICVLNELHEALK----KYH 155

Query: 118 GSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFW 177
              YS   S + GS +      K+ TTE S+ + +F  QL  S+ C  C++ +   E+F 
Sbjct: 156 ---YSRRRSYEKGSTQRC--CRKWITTETSIITQLFEEQLNYSIVCLKCEKCTYKNEVFT 210

Query: 178 ELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFN 237
             SLP+P    + YEC LR  ++C            F + +L                +N
Sbjct: 211 VFSLPIP----SKYECSLRDCLQC-----------FFQQDALT---------------WN 240

Query: 238 GETLHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFT--QKVTSPIKFPREGLDM 295
            E +H  C +C+ + +      I + P ++I   KRF    T  +K+ + I +P   LD+
Sbjct: 241 NE-IH--CSFCETKQETAVRASISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDL 297

Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGT 339
             YI +  R+      Y+LCAV NH G     GHYTA+C+   T
Sbjct: 298 TPYICSIFRKYPK---YNLCAVVNHFGDLD-GGHYTAFCKNSVT 337


>sp|Q6GNI6|UB22A_XENLA Ubiquitin carboxyl-terminal hydrolase 22-A OS=Xenopus laevis
           GN=usp22-a PE=2 SV=1
          Length = 523

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 166/390 (42%), Gaps = 61/390 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTC++N ++Q L++TP  R+  L++       S +   LV  +    +  +
Sbjct: 172 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSC-LVCEMSTLFQEFY 230

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
           S          +L  + ++ +   G +QQDA EFL+  L  L+   K      NG   +N
Sbjct: 231 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 287

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            +                      +   IF G L+S V C  C   ST  + FW++SL +
Sbjct: 288 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 329

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
           P      +     S     N +   +              G  TL +CL +F   E L +
Sbjct: 330 PGSSTPFWPLSPGSDAGVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 375

Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
           +    C  C    +  K   +++LP V     KRF  S+   +K+T+ + FP E LDM  
Sbjct: 376 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLE-LDMTP 434

Query: 298 YISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLY 345
           ++++S   R+  +Y            Y L AV NH G T   GHYT++ R+    +W+  
Sbjct: 435 FMASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKC 492

Query: 346 DDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
           DD +++    + V  +E     Y+L Y ++
Sbjct: 493 DDAIITKASIKDVLDSE----GYLLFYHKQ 518


>sp|Q6DCJ1|UB22B_XENLA Ubiquitin carboxyl-terminal hydrolase 22-B OS=Xenopus laevis
           GN=usp22-b PE=2 SV=2
          Length = 523

 Score =  115 bits (289), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 162/389 (41%), Gaps = 59/389 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTC++N ++Q L++TP  R+  L++       S +   LV  +    +  +
Sbjct: 172 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSC-LVCEMSTLFQEFY 230

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
           S          +L  + ++ +   G +QQDA EFL+  L  L+   K      NG   +N
Sbjct: 231 SGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCK---GDDNGKKANN 287

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            +                      +   IF G L+S V C  C   ST  + FW++SL +
Sbjct: 288 PNHCNC------------------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDL 329

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
           P      +     S     N +   +              G  TL +CL +F   E L +
Sbjct: 330 PGSSTPFWPLSPGSDAGVVNGESHVS--------------GTTTLTDCLRRFTRPEHLGS 375

Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLDMEY 297
           +    C  C    +  K   +++LP V     KRF  S+   +K+T+ + FP E   M +
Sbjct: 376 SAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMMPF 435

Query: 298 YISASGRRVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
             S+   R+  +Y            Y L AV NH G T   GHYT++ R+    +W+  D
Sbjct: 436 MASSKESRMNGQYQQPSDSLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQH-KDQWFKCD 493

Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
           D +++    + V  +E     Y+L Y ++
Sbjct: 494 DAIITKASIKDVIDSE----GYLLFYHKQ 518


>sp|A7Z056|UBP20_BOVIN Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus GN=USP20
           PE=2 SV=1
          Length = 912

 Score =  114 bits (286), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 123/256 (48%), Gaps = 42/256 (16%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
           SV SDIF G + S V+C  C R ST  E F +LSLP+P                   PG 
Sbjct: 441 SVISDIFDGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 500

Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
            G  Y  Q   +      +R   S     FW    PV     TL +CL  FF  + L   
Sbjct: 501 CGDSYVAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 553

Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
              +C+ CKK  + VK  ++ RLP +L +  KRF     ++ K++S + FP EGLD+  +
Sbjct: 554 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPF 613

Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
           ++          TYDL +V  H G TA  GHY AYC+    G+WY +DD  V+ V    V
Sbjct: 614 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 670

Query: 359 ESAEAEHGAYILVYQR 374
           ++AE    AY+L Y++
Sbjct: 671 QNAE----AYVLFYRK 682



 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GN+CY+N+ LQ LSN P      L     +  D K    L  +    +  +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200

Query: 64  --SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                + V+ T ++   ++     F G  QQD QEFL  L+  L+EE K
Sbjct: 201 HRKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248


>sp|Q8CEG8|UBP27_MOUSE Ubiquitin carboxyl-terminal hydrolase 27 OS=Mus musculus GN=Usp27
           PE=2 SV=2
          Length = 438

 Score =  114 bits (286), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 173/395 (43%), Gaps = 72/395 (18%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
           GL G+ N GNTC++N ++Q L++TP  R+  L++    ++P       +  LV  + +  
Sbjct: 76  GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 130

Query: 60  KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNG 118
           + ++S GN   +    LL L   + +   G +QQDA EFL+  L  L+   K       G
Sbjct: 131 RELYS-GNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCK---GDDVG 186

Query: 119 STYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWE 178
              SN +                      +   IF G L+S V C  C   ST  +  W+
Sbjct: 187 KVASNPNHCNC------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPCWD 228

Query: 179 LSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNG 238
           +SL +P    + +     S  R S+    S +            PG  TL +CL +F   
Sbjct: 229 ISLDLPGSCTSFWP---MSPGRESSLNGESHI------------PGITTLTDCLRRFTRP 273

Query: 239 ETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREG 292
           E L ++    C  C+   +  K   +++LP V    FKRF  +  Q  K+T+ I FP E 
Sbjct: 274 EHLGSSAKIKCGSCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLE- 332

Query: 293 LDMEYYISASGR-RVESRY-----------TYDLCAVSNHIGKTALYGHYTAYCRREGTG 340
           LDM  ++++S   RV  +             Y L AV NH G T   GHYT++ R     
Sbjct: 333 LDMTPFMASSKETRVNGQLQLPTNSANNENKYSLFAVVNHQG-TLESGHYTSFIRHH-RD 390

Query: 341 RWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
           +W+  DD V++    + V  +E     Y+L Y ++
Sbjct: 391 QWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 421


>sp|A6NNY8|UBP27_HUMAN Ubiquitin carboxyl-terminal hydrolase 27 OS=Homo sapiens GN=USP27X
           PE=2 SV=3
          Length = 438

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 172/400 (43%), Gaps = 82/400 (20%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNE----DIPIHPDSKSQGQLVDALVNFM 59
           GL G+ N GNTC++N ++Q L++TP  R+  L++    ++P       +  LV  + +  
Sbjct: 76  GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMP-----SPELCLVCEMSSLF 130

Query: 60  KMMWSSGNLVLNTKAILLALR-SYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPDQY 116
           + ++ SGN   +    LL L   + +   G +QQDA EFL+  L  L+   K   V    
Sbjct: 131 RELY-SGNPSPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAA 189

Query: 117 NGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIF 176
           N   + N                        +   IF G L+S V C  C   ST  +  
Sbjct: 190 NNPNHCNC-----------------------IIDQIFTGGLQSDVTCQACHGVSTTIDPC 226

Query: 177 WELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFF 236
           W++SL +P    + +     S  R S+    S +            PG  TL +CL +F 
Sbjct: 227 WDISLDLPGSCTSFWP---MSPGRESSVNGESHI------------PGITTLTDCLRRFT 271

Query: 237 NGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPR 290
             E L ++    C  C+   +  K   + +LP V    FKRF  +  Q  K+T+ I FP 
Sbjct: 272 RPEHLGSSAKIKCGSCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPL 331

Query: 291 EGLDMEYYISASGRRVESRYT---------------YDLCAVSNHIGKTALYGHYTAYCR 335
           E LDM  ++++S    ESR                 Y L AV NH G T   GHYT++ R
Sbjct: 332 E-LDMTPFMASSK---ESRMNGQLQLPTNSGNNENKYSLFAVVNHQG-TLESGHYTSFIR 386

Query: 336 REGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQRR 375
                +W+  DD V++    + V  +E     Y+L Y ++
Sbjct: 387 HH-KDQWFKCDDAVITKASIKDVLDSE----GYLLFYHKQ 421


>sp|B1WBD7|UBP20_XENLA Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus laevis GN=usp20
           PE=2 SV=1
          Length = 840

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 123/252 (48%), Gaps = 34/252 (13%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
           SV SDIF G + S V+C  C R ST  E F +LSLP+P   G     +L S++  S   +
Sbjct: 369 SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIP---GKEDLAKLHSTIHQSTVIK 425

Query: 207 TST-------------VYEIFWELSLPVPPG-----GGTLYECLNKFFNGETLHN----T 244
             T             V +      +   P        TL +CL  FF  + L      +
Sbjct: 426 AGTCGDSYAAQGWLAFVMDYIRRFVVSCIPSWFWGPMITLEDCLAAFFAADELKGDNMYS 485

Query: 245 CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYYISAS 302
           C+ CKK  + VK  ++ RLP VL +  KRF     ++ K+ S + FP EGL++  +++  
Sbjct: 486 CERCKKLRNGVKYCKVLRLPEVLCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKE 545

Query: 303 GRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAE 362
              V    TYDL AV  H G +A  GHY +YC+    G+WY +DD  V+ V    V++AE
Sbjct: 546 C--VSRITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAE 602

Query: 363 AEHGAYILVYQR 374
               AY+L Y++
Sbjct: 603 ----AYVLFYRK 610



 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 5/114 (4%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GN+CY+N+ LQ LSN P      L     +  D K    L  +    +  +W
Sbjct: 99  GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSELW 156

Query: 64  SSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK--VVPD 114
                     + L   ++     F G  QQD QEFL  L+  L+EE K  ++P+
Sbjct: 157 HKKRPSYVVPSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLHEELKEPILPE 210


>sp|Q6FQF0|UBP4_CANGA Ubiquitin carboxyl-terminal hydrolase 4 OS=Candida glabrata (strain
           ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
           GN=DOA4 PE=3 SV=1
          Length = 887

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 162/410 (39%), Gaps = 93/410 (22%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQ----GQLVDALVNFMKMM 62
           G+ N GN+CYIN ++QC+  T     + LN     H + +S+    G L       +K M
Sbjct: 526 GLENMGNSCYINCIIQCIFATTELIKIFLNGTYAKHINKQSKLGSKGVLSHNFAKLLKDM 585

Query: 63  W---SSGNL-----VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------ 108
           +   SS  +      + T    +A  S    F    QQD  EF  +LL  L+E+      
Sbjct: 586 YEENSSKKIGKKHGAVKTLQFKMACASVNSLFKDASQQDCLEFCQFLLDGLHEDLNQCGA 645

Query: 109 ----AKVVPDQYNGSTYSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCS 164
                ++ P+        N S +   S      WE++ TT+ S+  D+F GQ  S +RC 
Sbjct: 646 NPPLKELSPEA--EKMRENLSLRVASSIE----WERYLTTDFSIIVDLFQGQYASQLRCK 699

Query: 165 NCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPG 224
            C RTST Y+ F  LS+PVP G              C                       
Sbjct: 700 VCNRTSTTYQAFSVLSVPVPSGKS------------CG---------------------- 725

Query: 225 GGTLYECLNKFFNGETLHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ 280
              L +C  +F   E L       C  CKK+    K   I RLP  LI+  KRF  N   
Sbjct: 726 ---LLDCFIEFTKTENLEVDEQWFCPSCKKKQPSTKKLTITRLPRNLIIHLKRF-DNMMN 781

Query: 281 KVTSPIKFPREGLDMEYY----------------ISASGRRVESRYTYDLCAVSNHIGKT 324
           K    +++P + LD+  +                I A G+     + Y L   + H G T
Sbjct: 782 KNNIFVRYP-QILDLTPFWANDSDGKLPPGITDEIPARGQV--PPFNYRLYGAACHFG-T 837

Query: 325 ALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVESAEAEHGAYILVYQR 374
              GHYT+Y  +     W  +DDTV  PV  Q    + +   AY+L Y R
Sbjct: 838 LYGGHYTSYVDKGPEKGWIYFDDTVYRPVRFQNEFISPS---AYVLFYHR 884


>sp|Q9Y2K6|UBP20_HUMAN Ubiquitin carboxyl-terminal hydrolase 20 OS=Homo sapiens GN=USP20
           PE=1 SV=2
          Length = 914

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 121/256 (47%), Gaps = 42/256 (16%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
           SV SDIF G + S V+C  C R ST  E F +LSLP+P                   PG 
Sbjct: 443 SVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 502

Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
            G  Y  Q   +      +R   S     FW    PV     TL +CL  FF  + L   
Sbjct: 503 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 555

Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
              +C+ CKK  + VK  ++ RLP +L +  KRF     ++ K+ S + FP EGLD+  +
Sbjct: 556 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 615

Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
           ++          TYDL +V  H G TA  GHY AYC+    G+WY +DD  V+ V    V
Sbjct: 616 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 672

Query: 359 ESAEAEHGAYILVYQR 374
           ++AE     Y+L Y++
Sbjct: 673 QNAE----GYVLFYRK 684



 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GN+CY+N+ LQ LSN P      L     +  D K    L  +    +  +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 200

Query: 64  SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
                + V+ T ++   ++     F G  QQD QEFL  L+  L+EE      A V   +
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 259

Query: 116 YNGSTYSNTSSKQVG 130
              S  S+T  K+ G
Sbjct: 260 ARDSDSSDTDEKREG 274


>sp|A0JM59|UBP20_XENTR Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis
           GN=usp20 PE=2 SV=1
          Length = 884

 Score =  113 bits (283), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 123/259 (47%), Gaps = 48/259 (18%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECQLRSSVRCSNCKR 206
           SV SDIF G + S V+C  C R ST  E F +LSLP+P   G     +L S++  S   +
Sbjct: 413 SVISDIFDGSILSLVQCLTCDRVSTTIETFQDLSLPIP---GKEDLAKLHSTIHQSAVSK 469

Query: 207 TST-------------------------VYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
             T                         +   FW   +       TL +CL  FF  + L
Sbjct: 470 AGTCGDSYAAQGWLSFFMDYIRRFVVSCIPSWFWGPMI-------TLEDCLAAFFAADEL 522

Query: 242 HN----TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDM 295
                 +C+ CKK  + VK  ++ RLP +L +  KRF     ++ K+ S + FP EGL++
Sbjct: 523 KGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNL 582

Query: 296 EYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDA 355
             +++     V    TYDL AV  H G +A  GHY +YC+    G+WY +DD  V+ V  
Sbjct: 583 RPFLAKEC--VSRITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHE 639

Query: 356 QTVESAEAEHGAYILVYQR 374
             V++AE    AY+L Y++
Sbjct: 640 TVVQNAE----AYVLFYRK 654



 Score = 54.3 bits (129), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GN+CY+N+ LQ LSN P      L     +  D K    L  +    +  +W
Sbjct: 143 GLTGMKNIGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISELW 200

Query: 64  SSGNLVLNTKAILL-ALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                     + L   ++     F G  QQD QEFL  L+  L+EE K
Sbjct: 201 HKKRPSYVVPSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLHEELK 248


>sp|Q5R5Z6|UBP20_PONAB Ubiquitin carboxyl-terminal hydrolase 20 OS=Pongo abelii GN=USP20
           PE=2 SV=1
          Length = 913

 Score =  111 bits (277), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 120/256 (46%), Gaps = 42/256 (16%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
           SV SDIF G + S V+C  C R S   E F +LSLP+P                   PG 
Sbjct: 442 SVISDIFDGSILSLVQCLTCDRVSATVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGT 501

Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
            G  Y  Q   +      +R   S     FW    PV     TL +CL  FF  + L   
Sbjct: 502 CGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 554

Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
              +C+ CKK  + VK  ++ RLP +L +  KRF     ++ K+ S + FP EGLD+  +
Sbjct: 555 NMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPF 614

Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
           ++          TYDL +V  H G TA  GHY AYC+    G+WY +DD  V+ V    V
Sbjct: 615 LAKEC--TSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 671

Query: 359 ESAEAEHGAYILVYQR 374
           ++AE     Y+L Y++
Sbjct: 672 QNAE----GYVLFYRK 683



 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 11/135 (8%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GN+CY+N+ LQ LSN P      L     +  D K    L  +    +  +W
Sbjct: 142 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLVSEVW 199

Query: 64  SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEE------AKVVPDQ 115
                + V+ T ++   ++     F G  QQD QEFL  L+  L+EE      A V   +
Sbjct: 200 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTE 258

Query: 116 YNGSTYSNTSSKQVG 130
              S  S+T  K+ G
Sbjct: 259 ARDSDSSDTDEKREG 273


>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
           PE=3 SV=2
          Length = 370

 Score =  110 bits (276), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 161/393 (40%), Gaps = 83/393 (21%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMWSSG 66
           G+ N GNTCY NSVLQ L     FR  +L   +      K +  L+  L +    + +  
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKV----QQKKKENLLTCLADLFHSIATQK 91

Query: 67  NL--VLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAA----LNEEAKVVPDQYNGST 120
               V+  K  +  LR     FD   QQDA EFL YLL      L EE K   ++ NG  
Sbjct: 92  KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEERK--QEKQNGRL 149

Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
            +N      G+  A     +    + +   +IF G L +  RC NC+  S+  E F +LS
Sbjct: 150 KNN------GTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLS 203

Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
           + V                     + TS  +                   CL  F N ET
Sbjct: 204 VDVE--------------------QNTSITH-------------------CLRDFSNTET 224

Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFS-----SNFTQKVTSPIKFPRE 291
           L +     C+ C  + +  K   +++LP +L L  KRF        +T K++  + FP  
Sbjct: 225 LCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYT-KLSYRVVFP-- 281

Query: 292 GLDMEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVS 351
            L++  + + SG  V     YDL AV  H G     GHY    +  G   W L+DD +V 
Sbjct: 282 -LELRLF-NTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGF--WLLFDDDIVE 337

Query: 352 PVDAQTVE---------SAEAEHGAYILVYQRR 375
            +DAQ +E         S  +E G YIL YQ R
Sbjct: 338 KIDAQAIEEFYGLTSDISKNSESG-YILFYQSR 369


>sp|Q61068|UBPW_MOUSE Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1
           PE=1 SV=1
          Length = 526

 Score =  109 bits (273), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 155/372 (41%), Gaps = 77/372 (20%)

Query: 3   PGLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQL--VDALVNFMK 60
           PG  G+ N GN+CY+N+ LQCL++TP   + +L+++      S    +L  ++ALV    
Sbjct: 49  PGC-GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKLCAMEALVTQSL 107

Query: 61  MMWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGST 120
           +   SG+ V+    IL      T  F  +QQ+DA EFL++ L  ++E             
Sbjct: 108 LHSHSGD-VMKPSHIL------TSAFHKHQQEDAHEFLMFTLETMHE------------- 147

Query: 121 YSNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELS 180
                     S   +H   K  + ++S   DIF G  RS ++C  C+ TS  Y+ F ++ 
Sbjct: 148 ----------SCLQVHRQSKPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIP 197

Query: 181 LPVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGET 240
           L +                         +V +  W+        G   Y           
Sbjct: 198 LDI---------------------SSAQSVKQALWDTEKSEELCGDNAY----------- 225

Query: 241 LHNTCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKFPREGLDMEYYIS 300
               C  C+++    K   +   P VL++   RFS+    K+   + +P E LD++ Y+S
Sbjct: 226 ---YCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYP-EFLDLKPYLS 281

Query: 301 ASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTVES 360
                      Y L AV  H G T+  GHY   C + G G+WY  DDT V+  D  +V  
Sbjct: 282 EP---TGGPLPYALYAVLVHDGATSHSGHYFC-CVKAGHGKWYKMDDTKVTRCDVTSV-- 335

Query: 361 AEAEHGAYILVY 372
                 AY+L Y
Sbjct: 336 --LNENAYVLFY 345


>sp|Q9VVR1|NOT_DROME Ubiquitin carboxyl-terminal hydrolase nonstop OS=Drosophila
           melanogaster GN=not PE=1 SV=3
          Length = 735

 Score =  109 bits (272), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 159/380 (41%), Gaps = 54/380 (14%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N G TC++N ++Q L +TP   +  +++       S S   LV  +    +  +
Sbjct: 395 GLRGLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGSKS-SHKCLVCEVSRLFQEFY 453

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
           S     L+   +L  + ++ K   G +QQDA EF +  L  L+        ++   + S+
Sbjct: 454 SGSRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSS 513

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            S     S  +       Q     +   IF G L+S V C  C   ST Y+ FW++SL  
Sbjct: 514 GSGSGTNSSNSSSSHCYGQCN--CIIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISL-- 569

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGG---GTLYECLNKFFNGET 240
                                           +L      GG    TL +CL ++   E 
Sbjct: 570 --------------------------------DLGETTTHGGVTPKTLIDCLERYTRAEH 597

Query: 241 LHNT----CQYCKKQSDLVKLYEIQRLPPVLILWFKRF--SSNFTQKVTSPIKFPREGLD 294
           L +     C  CK   +  K + ++ LP V+    KRF  S+   +K++S I+FP E  D
Sbjct: 598 LGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFEHSALIDRKISSFIQFPVE-FD 656

Query: 295 MEYYISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVD 354
           M  ++S   +     + + L AV NH+G T   GHYTAY R +    W   DD V++   
Sbjct: 657 MTPFMSEK-KNAYGDFRFSLYAVVNHVG-TIDTGHYTAYVRHQ-KDTWVKCDDHVITMAS 713

Query: 355 AQTVESAEAEHGAYILVYQR 374
            + V  +E     Y+L Y +
Sbjct: 714 LKQVLDSE----GYLLFYHK 729


>sp|Q8C6M1|UBP20_MOUSE Ubiquitin carboxyl-terminal hydrolase 20 OS=Mus musculus GN=Usp20
           PE=1 SV=1
          Length = 916

 Score =  109 bits (272), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 121/256 (47%), Gaps = 42/256 (16%)

Query: 147 SVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPVP-------------------PGG 187
           SV SD+F G + S V+C  C R ST  E F +LSLP+P                   PG 
Sbjct: 445 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGA 504

Query: 188 -GTLYECQLRSSVRCSNCKR--TSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN- 243
            G  Y  Q   +      +R   S     FW    PV     TL +CL  FF  + L   
Sbjct: 505 CGDSYSSQGWLAFIVEYIRRFVVSCTPSWFWG---PV----VTLEDCLAAFFAADELKGD 557

Query: 244 ---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSN--FTQKVTSPIKFPREGLDMEYY 298
              +C+ CKK  + VK  ++  LP +L +  KRF     ++ KV+S + FP EGLD+  +
Sbjct: 558 NMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPF 617

Query: 299 ISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQTV 358
           ++          TYDL +V  H G TA  GHY AYC+    G+WY +DD  V+ V    V
Sbjct: 618 LAKEC--TSQVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVV 674

Query: 359 ESAEAEHGAYILVYQR 374
           ++ E    AY+L Y++
Sbjct: 675 QNVE----AYVLFYRK 686



 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GN+CY+N+ LQ LSN P      L     +  D K    L  +    +  +W
Sbjct: 143 GLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKP--ALCKSYQKLISEVW 200

Query: 64  SSG--NLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAK 110
                + V+ T ++   ++     F G  QQD QEFL  L+  L+EE K
Sbjct: 201 HKKRPSYVVPT-SLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELK 248


>sp|B4LG38|UBP36_DROVI Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila virilis
           GN=Usp36 PE=3 SV=1
          Length = 1214

 Score =  108 bits (271), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 165/376 (43%), Gaps = 77/376 (20%)

Query: 7   GIANAGNTCYINSVLQCLSNTPAFRNVLLNE-----DIPIHPDSKSQGQLVDALVNFMKM 61
           G+ N GNTCY+NS LQ L + PA  N L++E     +  I     S G ++ A+   ++ 
Sbjct: 193 GMLNVGNTCYLNSTLQALFHIPALANWLVSETSHVENCNISESCGSGGCIICAMAKTLQT 252

Query: 62  MWSSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTY 121
             S+ + V     I   LR   K     +Q+DA EFL +L+ A+ E+A            
Sbjct: 253 TQSNQSAV-RPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAM-EKA------------ 298

Query: 122 SNTSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSL 181
                          Y  +F+      F ++   QL         K T+ + +IF     
Sbjct: 299 ---------------YLMRFRN-----FKEL--DQL--------VKETTPISQIF----- 323

Query: 182 PVPPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETL 241
                GG L     RS VRC +C   S  ++ F +L L +     TL E  + +F+ E L
Sbjct: 324 -----GGYL-----RSEVRCLSCNHVSITFQHFQDLLLDIRKAD-TLEEAFDGYFSRERL 372

Query: 242 HN---TCQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQKVTSPIKF-PREGLDMEY 297
            +    C+ CKK+    K + ++R P  L +  KRFS     K+T  I F PR  +D+  
Sbjct: 373 EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM-MGNKLTKQISFKPR--IDLSR 429

Query: 298 YISASGRRVESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYDDTVVSPVDAQT 357
           + + S        +Y L ++  H+G +   GHYTA    E  G +Y +DD+ V P+  Q+
Sbjct: 430 FAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTEA-GSYYNFDDSYVKPIAMQS 488

Query: 358 VESAEAEHGAYILVYQ 373
           V        AYI+ Y+
Sbjct: 489 V----CNTNAYIMFYE 500


>sp|Q70EK9|UBP51_HUMAN Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51
           PE=2 SV=1
          Length = 711

 Score =  107 bits (268), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 167/389 (42%), Gaps = 60/389 (15%)

Query: 4   GLNGIANAGNTCYINSVLQCLSNTPAFRNVLLNEDIPIHPDSKSQGQLVDALVNFMKMMW 63
           GL G+ N GNTC++N ++Q L++ P  ++  L++       S S   LV  + +    M+
Sbjct: 361 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC-LVCEMSSLFHAMY 419

Query: 64  SSGNLVLNTKAILLALRSYTKKFDGNQQQDAQEFLLYLLAALNEEAKVVPDQYNGSTYSN 123
           S          +L  +  + +   G +QQDA EFL+ +L  L+  +K   D   G   +N
Sbjct: 420 SGSRTPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSK---DDSGGQEANN 476

Query: 124 TSSKQVGSFRALHYWEKFQTTEASVFSDIFVGQLRSSVRCSNCKRTSTVYEIFWELSLPV 183
            +                      +   IF G L+S V C  C   ST  +  W++SL +
Sbjct: 477 PNCCNC------------------IIDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDL 518

Query: 184 PPGGGTLYECQLRSSVRCSNCKRTSTVYEIFWELSLPVPPGGGTLYECLNKFFNGETLHN 243
            PG    ++ Q        N +R  +       +     PG  +L +CL  F   E L +
Sbjct: 519 -PGSCATFDSQ--------NPERADSTVSRDDHI-----PGIPSLTDCLQWFTRPEHLGS 564

Query: 244 T----CQYCKKQSDLVKLYEIQRLPPVLILWFKRFSSNFTQ--KVTSPIKFPREGLDMEY 297
           +    C  C+   +  K   +++LP V     KRF     Q  K+ + I FP E LDM  
Sbjct: 565 SAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLE-LDMTP 623

Query: 298 YISASGRR-----------VESRYTYDLCAVSNHIGKTALYGHYTAYCRREGTGRWYLYD 346
           +++++              V +   Y L AV NH G T   GHYT++ R++   +W+  D
Sbjct: 624 FLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHG-TLESGHYTSFIRQQ-KDQWFSCD 681

Query: 347 DTVVSPVDAQTVESAEAEHGAYILVYQRR 375
           D +++    + +  +E     Y+L Y ++
Sbjct: 682 DAIITKATIEDLLYSE----GYLLFYHKQ 706


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.134    0.411 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,055,057
Number of Sequences: 539616
Number of extensions: 5835294
Number of successful extensions: 13219
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 11690
Number of HSP's gapped (non-prelim): 706
length of query: 375
length of database: 191,569,459
effective HSP length: 119
effective length of query: 256
effective length of database: 127,355,155
effective search space: 32602919680
effective search space used: 32602919680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)