RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15063
(417 letters)
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 154 bits (391), Expect = 4e-43
Identities = 55/265 (20%), Positives = 94/265 (35%), Gaps = 78/265 (29%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETS-HVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
+ + + + G+ D E + R +R+V+ HS+F+P + ND+ALL LDRP+
Sbjct: 184 YQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQ 243
Query: 214 TGTIQPVCLPQKGESFIGKRGHVVGWGVTSF-PMGEPSPTLQKLEVKVLSNARCSTVIEE 272
I +CLPQ+ + F GWG F S L+K+++ + +C +
Sbjct: 244 ADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRN 303
Query: 273 S-------IGIGMLCAAPDETQGTCFVPVSPVGYTKKHLQQFHQGTTYRQPRRRIILGGE 325
+ + +CA ++ + TC G
Sbjct: 304 TRLGLKFVLDQTFVCAGGEQGKDTC------------------TG--------------- 330
Query: 326 ADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLAGIVSYG 385
DG G L C P ++ GIV++G
Sbjct: 331 --------------DG----GSPL----------FCPDPRNP------SRYMQMGIVAWG 356
Query: 386 VTGCAIMPSYPDLYTRVSEYIRWIH 410
+ GC + P +Y V+ + WI
Sbjct: 357 I-GCG-DENVPGVYANVAHFRNWID 379
Score = 71.0 bits (174), Expect = 1e-13
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 16/111 (14%)
Query: 280 CAAPDETQGTCFVPVSPVGYTKKHLQQFHQGTTYRQPRRRIILGG--EADIGEFPWQVAI 337
C P+ G SP L+ G + I G EA+ GEFPW VA+
Sbjct: 92 CGLPE---GGVLPTPSPTPPVVPVLKPSFCGIRNERGLDFKITGQTNEAEYGEFPWMVAV 148
Query: 338 --------ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLAG 380
+ + CGG+L+ VLT AHC+ D + AG
Sbjct: 149 LKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCV---NSYQSNLDAIKIRAG 196
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 130 bits (330), Expect = 8e-36
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 148 VCDIDQLRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQL 207
D R + ++ LG HD +Q + R ++R++ H F+ F DIALL+L
Sbjct: 44 YIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLEL 103
Query: 208 DRPVPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC 266
++P + ++P+ LP F GK V GWG T + G + LQK E++V++ C
Sbjct: 104 EKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYG-GTGALILQKGEIRVINQTTC 162
Query: 267 STVIEESIGIGMLCA 281
++ + I M+C
Sbjct: 163 ENLLPQQITPRMMCV 177
Score = 68.8 bits (169), Expect = 2e-13
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMF-FCGGALLNEHFVLTAAHCIMTGGPLTFEQ-DGYHV 377
++GG +AD GE+PWQV++ G CG +L++ +++++AAHC + + +
Sbjct: 1 VVGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTA 60
Query: 378 LAGIVS 383
G+
Sbjct: 61 FLGLHD 66
Score = 59.5 bits (145), Expect = 3e-10
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 365 GGPL-TFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + E DG AG+VS+G GCA + P +YTR+ + WI
Sbjct: 192 GGPLSSVEADGRIFQAGVVSWG-DGCA-QRNKPGVYTRLPLFRDWIK 236
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 130 bits (328), Expect = 1e-35
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
R+ S+ LG H + L V R + ++ + H++ NDIA++ L+ V T
Sbjct: 46 RNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYT 105
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-STVIEE 272
IQP+ LP++ + F G+ + GWG + G + LQ+ +V +LSN RC + E
Sbjct: 106 DYIQPISLPEENQVFPPGRNCSIAGWGTVVYQ-GTTADILQEADVPLLSNERCQQQMPEY 164
Query: 273 SIGIGMLCA 281
+I M+CA
Sbjct: 165 NITENMICA 173
Score = 73.8 bits (182), Expect = 3e-15
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG +A G +PW V + D CG +L++ ++++AAHC+ E + +
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCV---YGRNLEPSKWTAIL 57
Query: 380 GIVS 383
G+
Sbjct: 58 GLHM 61
Score = 63.0 bits (154), Expect = 1e-11
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +++ LAG+ S+G CA +P+ P +Y RVS + WI
Sbjct: 188 GGPLMCQENNRWFLAGVTSFGY-ECA-LPNRPGVYARVSRFTEWIQ 231
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 128 bits (324), Expect = 5e-35
Identities = 23/128 (17%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
+ + + L +G+HD + + V + + ++ P L ND+++++ +
Sbjct: 46 QGEAPALVSLVVGEHDSSAASTVRQTHD-VDSIFVNENYDPATLENDVSVIKTAVAITFD 104
Query: 215 GTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-STVIEES 273
+ P+C P ++ ++ GWG + L+ + + + +NA C + ++
Sbjct: 105 INVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDT 164
Query: 274 IGIGMLCA 281
I M+CA
Sbjct: 165 IYDDMICA 172
Score = 67.6 bits (166), Expect = 4e-13
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 321 ILGG-EADIGEFPWQVAIALD--GMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHV 377
I+GG EA EFPWQV++ FCGG+++N+ +V+ AAHC+ P +
Sbjct: 1 IVGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAP-----ALVSL 55
Query: 378 LAGI 381
+ G
Sbjct: 56 VVGE 59
Score = 59.5 bits (145), Expect = 2e-10
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 365 GGPLT-FEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL+ + G L GIVS+G+ GCA YP +Y+RV + WI
Sbjct: 189 GGPLSVKDGSGIFSLVGIVSWGI-GCA--SGYPGVYSRVGFHAGWIT 232
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 123 bits (312), Expect = 3e-33
Identities = 31/125 (24%), Positives = 43/125 (34%), Gaps = 4/125 (3%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ LG H NE R + S + + DI L++LD PV + I P
Sbjct: 47 KNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAP 106
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTV---IEESIGI 276
LP S G ++GWG S G + + +L C E
Sbjct: 107 FSLPSSPPSV-GSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATS 165
Query: 277 GMLCA 281
LCA
Sbjct: 166 RTLCA 170
Score = 68.4 bits (168), Expect = 2e-13
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 321 ILGG-EADIGEFPWQVAI--ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHV 377
I+GG E +I E + VA+ + FCGG L+N+ +VLTAAHC + + +
Sbjct: 1 IIGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCD---------RKNFRI 51
Query: 378 LAGIVS 383
G+ S
Sbjct: 52 KLGMHS 57
Score = 52.2 bits (126), Expect = 7e-08
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL GI S+G CA P P YT+V +++ WI
Sbjct: 185 GGPLICN----GQFQGIASWGDDPCA-QPHKPAAYTKVFDHLDWIE 225
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 123 bits (310), Expect = 6e-33
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
++ G +L+ + + + ++ ++ H ++ ++DIAL++L P+ T
Sbjct: 48 GLPLQDVWRIYSGILELSDITKDT-PFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYT 106
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-STVIEE 272
+P+ LP KG++ I V GWG + GE LQK+ + +++N C +
Sbjct: 107 EFQKPISLPSKGDTSTIYTNCWVTGWGFSK-EKGEIQNILQKVNIPLVTNEECQKRYQDY 165
Query: 273 SIGIGMLCA 281
I M+CA
Sbjct: 166 KITQRMVCA 174
Score = 65.7 bits (161), Expect = 2e-12
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 321 ILGG-EADIGEFPWQVAI---ALDGMFFCGGALLNEHFVLTAAHCI 362
I+GG E+ GE+PWQV++ CGG+L+ +VLTAAHC
Sbjct: 1 IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCF 46
Score = 62.2 bits (152), Expect = 3e-11
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + +G L GI S+G GCA P +YT+V+EY+ WI
Sbjct: 189 GGPLVCKHNGMWRLVGITSWGE-GCA-RREQPGVYTKVAEYMDWIL 232
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 122 bits (309), Expect = 1e-32
Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 148 VCDIDQLRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFH-PFVLSNDIALLQ 206
+ ++ ++L++ +G H T+ + ++ H ++ L DIAL++
Sbjct: 45 LLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 104
Query: 207 LDRPVPLTGTIQPVCLPQKGESFI----GKRGHVVGWGVTS-----FPMGEPSPTLQKLE 257
L +PV + I PVCLP + + G +G V GWG LQ +
Sbjct: 105 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 164
Query: 258 VKVLSNARCSTVIEESIGIGMLCA 281
+ ++ C I M CA
Sbjct: 165 LPIVERPVCKDSTRIRITDNMFCA 188
Score = 70.4 bits (173), Expect = 6e-14
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 321 ILGG-EADIGEFPWQVAIALDG--MFFCGGALLNEHFVLTAAHCIM-TGGPLTFEQDGYH 376
I+ G +A+IG PWQV + CG +L+++ +VLTAAHC++ F ++
Sbjct: 1 IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLL 60
Query: 377 VLAG 380
V G
Sbjct: 61 VRIG 64
Score = 56.5 bits (137), Expect = 2e-09
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 365 GGPLTFEQ--DGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP + + GIVS+G GC YT V +WI
Sbjct: 206 GGPFVMKSPFNNRWYQMGIVSWGE-GCD-RDGKYGFYTHVFRLKKWIQ 251
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 122 bits (308), Expect = 1e-32
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ LG ++L +E + GV + H ++ F++ NDIAL++L V L TIQ
Sbjct: 64 LTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDTIQV 123
Query: 220 VCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST--VIEESIGI 276
CLP +G V GWG G + LQ+ V+ A CS ++
Sbjct: 124 ACLPSEGSLLPQDYPCFVTGWGRLY-TNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKE 182
Query: 277 GMLCAAPDETQGTC 290
M+CA D C
Sbjct: 183 TMVCAGGDGVISAC 196
Score = 65.3 bits (160), Expect = 3e-12
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 13/80 (16%)
Query: 310 GTTYRQPRR--RIILGGEADIGEFPWQVAI----ALDGMFFCGGALLNEHFVLTAAHCIM 363
G QP R++ G +A +PWQ+++ CGG L+ + VLTAAHCI
Sbjct: 2 GAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCIS 61
Query: 364 TGGPLTFEQDGYHVLAGIVS 383
LT Y V G +
Sbjct: 62 --NTLT-----YRVALGKNN 74
Score = 59.9 bits (146), Expect = 2e-10
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGV-TGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + DG + GIVS+G C P ++TRVS YI WI+
Sbjct: 201 GGPLNCQADGQWDVRGIVSFGSGLSCN-TFKKPTVFTRVSAYIDWIN 246
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 121 bits (307), Expect = 2e-32
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 6/126 (4%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ +GD + Q V V+ H+ F DIA+L+L P+ + P
Sbjct: 48 KRFKVRVGDRNTEQEEGG-EAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAP 106
Query: 220 VCLPQKGES----FIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIG 275
CLP++ + K G V G+G T GE S L+ LEV + C I
Sbjct: 107 ACLPERDWAESTLMTQKTGIVSGFGRTHE-KGEQSTRLKMLEVPYVDRNSCKLSSSFIIT 165
Query: 276 IGMLCA 281
M CA
Sbjct: 166 QNMFCA 171
Score = 68.8 bits (169), Expect = 2e-13
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 321 ILGG-EADIGEFPWQVAIA-LDGMFFCGGALLNEHFVLTAAHCI 362
I+GG E GE PWQ + + FCGG +L+E ++LTAAHC+
Sbjct: 1 IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCL 44
Score = 61.1 bits (149), Expect = 6e-11
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP + + GIVS+G GCA +YT+V+ +++WI
Sbjct: 186 GGPHVTRFKDTYFVTGIVSWGE-GCA-RKGKYGIYTKVTAFLKWID 229
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 123 bits (310), Expect = 2e-32
Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 10/144 (6%)
Query: 148 VCDIDQLRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFH-PFVLSNDIALLQ 206
+ ++ ++L++ +G H T+ + ++ H ++ L DIAL++
Sbjct: 75 LLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 134
Query: 207 LDRPVPLTGTIQPVCLPQKGESFI----GKRGHVVGWGVT-----SFPMGEPSPTLQKLE 257
L +PV + I PVCLP + + G +G V GWG + LQ +
Sbjct: 135 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 194
Query: 258 VKVLSNARCSTVIEESIGIGMLCA 281
+ ++ C I M CA
Sbjct: 195 LPIVERPVCKDSTRIRITDNMFCA 218
Score = 74.3 bits (183), Expect = 4e-15
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 296 PVGYTKKHLQQFHQGTTYRQPRRRIILGGEADIGEFPWQVAIALDG--MFFCGGALLNEH 353
P+ K + + RI+ G +A+IG PWQV + CG +L+++
Sbjct: 7 PLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDR 66
Query: 354 FVLTAAHCIM-TGGPLTFEQDGYHVLAG 380
+VLTAAHC++ F ++ V G
Sbjct: 67 WVLTAAHCLLYPPWDKNFTENDLLVRIG 94
Score = 56.2 bits (136), Expect = 5e-09
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 365 GGPLTFEQ--DGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP + + GIVS+G GC YT V +WI
Sbjct: 236 GGPFVMKSPFNNRWYQMGIVSWGE-GCD-RDGKYGFYTHVFRLKKWIQ 281
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 121 bits (305), Expect = 3e-32
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
L ++ G + +++ E + GV+ ++ H + DIALL+L+ V T
Sbjct: 48 GVESPKILRVYSGILNQSEIKEDT-SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYT 106
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-STVIEE 272
+ +P+ LP KGE I V GWG + TLQK ++ +++N C
Sbjct: 107 DSQRPISLPSKGERNVIYTDCWVTGWGYRK-LRDKIQNTLQKAKIPLVTNEECQKRYRGH 165
Query: 273 SIGIGMLCA 281
I M+CA
Sbjct: 166 KITHKMICA 174
Score = 64.9 bits (159), Expect = 4e-12
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 321 ILGG-EADIGEFPWQVAIALDG---MFFCGGALLNEHFVLTAAHCI 362
I+GG + GE+PWQV + CGG+++ ++LTAAHC
Sbjct: 1 IVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCF 46
Score = 61.8 bits (151), Expect = 4e-11
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL+ + + L GI S+G GCA P +YT V EY+ WI
Sbjct: 189 GGPLSCKHNEVWHLVGITSWGE-GCA-QRERPGVYTNVVEYVDWIL 232
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 121 bits (306), Expect = 3e-32
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 165 HLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQ 224
G+ D +E + + +V +S ++ ++NDI LL+L + T+ VCLP
Sbjct: 67 VAGEFDQGSSSEKI-QKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPS 125
Query: 225 KGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGMLCA 281
+ F G GWG+T + LQ+ + +LSN C I M+CA
Sbjct: 126 ASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICA 183
Score = 64.9 bits (159), Expect = 3e-12
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 319 RIILGGEADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHV 377
RI+ G EA G +PWQV++ G FCGG+L+NE++V+TAAHC V
Sbjct: 15 RIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC--------GVTTSDVV 66
Query: 378 LAGI 381
+AG
Sbjct: 67 VAGE 70
Score = 60.7 bits (148), Expect = 8e-11
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +++G L GIVS+G + S P +Y RV+ + W+
Sbjct: 196 GGPLVCKKNGAWTLVGIVSWG-SSTC-STSTPGVYARVTALVNWVQ 239
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 124 bits (314), Expect = 3e-32
Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 17/152 (11%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETS-----------HVRRGVRRVLFHSHFHPFVLSNDI 202
+ + LG+H ++ + V G+ + L H + + +DI
Sbjct: 165 VHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224
Query: 203 ALLQLDRPVPLTGTIQPVCLPQKGE----SFIGKRGHVVGWGVTSFPMGEPSPTLQKLEV 258
ALL+L+R VP I+P+CLP E + V GWG T G S L + V
Sbjct: 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTEN--GSSSDVLLQANV 282
Query: 259 KVLSNARCSTVIEESIGIGMLCAAPDETQGTC 290
+ + CS ++ + LC + Q +C
Sbjct: 283 PLQPRSACSQAYRRAVPLSQLCVGGGDLQDSC 314
Score = 78.4 bits (193), Expect = 4e-16
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 5/117 (4%)
Query: 251 PTLQKLEVKVLSNARCSTVIEESIGIGMLCAAPDETQGTCFVPVSPVGYTKKHLQQFHQG 310
T+++ + + S LC + + C + +K +
Sbjct: 49 RTIEERLTEAQKAGQKVPADYASYLQKALCGEFNGVRHFCCPSANIQHNSKVMSLFKDEN 108
Query: 311 TT-YRQPRRRIILGGEADIGEFPWQVAIAL----DGMFFCGGALLNEHFVLTAAHCI 362
+R+ G E + PW + + F CGGA+++E ++LTAAHC+
Sbjct: 109 FDCGNFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCV 165
Score = 65.3 bits (159), Expect = 9e-12
Identities = 23/54 (42%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 365 GGPL------TFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIHVN 412
GGPL E V GIVS GV C S P LYT V EY++WI
Sbjct: 319 GGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCG-QISLPGLYTNVGEYVQWITDT 371
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 120 bits (304), Expect = 4e-32
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 5/131 (3%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
R T + LG H L++ + +++ + S SNDI L++L L
Sbjct: 47 RFTKGQSPTVVLGAHSLSKNEASKQTLE-IKKFIPFSRVTSDPQSNDIMLVKLQTAAKLN 105
Query: 215 GTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVI---- 270
++ + + K G + V GWG T PS TL+++ V VLS C++
Sbjct: 106 KHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNG 165
Query: 271 EESIGIGMLCA 281
+ I M+CA
Sbjct: 166 DPFITKDMVCA 176
Score = 72.6 bits (179), Expect = 8e-15
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 319 RIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVL 378
II G E P+ +I G CGG L++ +VLTAAHC V+
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKG----QSPTVV 57
Query: 379 AGIVS 383
G S
Sbjct: 58 LGAHS 62
Score = 49.9 bits (120), Expect = 3e-07
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 7/47 (14%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSE-YIRWIH 410
GGPL + V IVS G C + + P +YT +++ Y WI
Sbjct: 191 GGPLICK----GVFHAIVSGG-HECGV-ATKPGIYTLLTKKYQTWIK 231
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 120 bits (303), Expect = 5e-32
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ ++LG H+L LN+ + R + + + + DI L++L+RPV + I P
Sbjct: 44 GNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAP 103
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGML 279
+ LP S G ++GWG + P + +L A C + + L
Sbjct: 104 LSLPSNPPSV-GSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAY-KGLAATTL 161
Query: 280 CA 281
CA
Sbjct: 162 CA 163
Score = 68.3 bits (168), Expect = 2e-13
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
++GG E +I E + + CGG L+N+ +VLTA HC + +
Sbjct: 1 VIGGDECNINEHRFLALV-YANGSLCGGTLINQEWVLTARHCD---------RGNMRIYL 50
Query: 380 GIVS 383
G+ +
Sbjct: 51 GMHN 54
Score = 56.8 bits (138), Expect = 1e-09
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G GI+S G CA P P +YT+V +Y WI
Sbjct: 178 GGPLI--CNG--QFQGILSVGGNPCAQ-PRKPGIYTKVFDYTDWIQ 218
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 119 bits (301), Expect = 1e-31
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 151 IDQLRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRP 210
+ S L + G+ D++ + + V +++ H +F +L NDI+LL+L
Sbjct: 47 VYGDDYENPSGLQIVAGELDMSVNEGSEQIIT-VSKIILHENFDYNLLDNDISLLKLSGS 105
Query: 211 VPLTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-STV 269
+ + P+ LP++G + V GWG TS G LQK+ V ++S+ C +
Sbjct: 106 LTFNDNVAPIALPEQGHTA-TGDVIVTGWGTTSEG-GNTPDVLQKVTVPLVSDEDCRADY 163
Query: 270 IEESIGIGMLCA 281
+ I M+CA
Sbjct: 164 GADEILDSMICA 175
Score = 68.0 bits (167), Expect = 3e-13
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 321 ILGG-EADIGEFPWQVAI----ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGY 375
I+GG +A +GEFP+Q++ FCG ++ NE++ +TA HC+ G G
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVY--GDDYENPSGL 58
Query: 376 HVLAGI 381
++AG
Sbjct: 59 QIVAGE 64
Score = 66.9 bits (164), Expect = 8e-13
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIHVNAI 414
GGPL G LAGIVS+G GCA P YP +YT VS ++ WI NA+
Sbjct: 190 GGPLAASDTGSTYLAGIVSWGY-GCA-RPGYPGVYTEVSYHVDWIKANAV 237
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 120 bits (303), Expect = 1e-31
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
+ L+ LG+HDL++ + R V +V+ S + P ++DIALL+L +PV LT
Sbjct: 45 KIKNWRNLIAVLGEHDLSEHDGD-EQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLT 103
Query: 215 GTIQPVCLPQKGESF----IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVI 270
+ P+CLP++ S + V GWG G + L L V L C
Sbjct: 104 DHVVPLCLPERTFSERTLAFVRFSLVSGWGQLL-DRGATALELMVLNVPRLMTQDCLQQS 162
Query: 271 EESIGIG-----MLCA 281
+ M CA
Sbjct: 163 RKVGDSPNITEYMFCA 178
Score = 71.9 bits (177), Expect = 1e-14
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
I+GG GE PWQV + ++G CGG L+N +V++AAHC
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCF 43
Score = 61.1 bits (149), Expect = 8e-11
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP G L GIVS+G GCA + +YTRVS+YI W+
Sbjct: 193 GGPHATHYRGTWYLTGIVSWGQ-GCA-TVGHFGVYTRVSQYIEWLQ 236
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 119 bits (300), Expect = 1e-31
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ + LG H LNE R + + + + VL DI L++LD V + I P
Sbjct: 45 TNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVP 104
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTV-IEESIGIGM 278
+ LP S G H++GWG + + +L +A C E
Sbjct: 105 LSLPSSPPSV-GSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRT 163
Query: 279 LCA 281
LCA
Sbjct: 164 LCA 166
Score = 72.6 bits (179), Expect = 8e-15
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
++GG E +I E VA FFC G L+NE +VLTAAHC + +
Sbjct: 1 VIGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCD---------NTNFQMKL 51
Query: 380 GIVS 383
G+ S
Sbjct: 52 GVHS 55
Score = 56.4 bits (137), Expect = 2e-09
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G GIVS+G C P +YT+V +Y WI
Sbjct: 181 GGPLI--CNG--QFQGIVSFGAHPCGQ-GLKPGVYTKVFDYNHWIQ 221
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 123 bits (309), Expect = 2e-31
Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 148 VCDIDQLRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFV-LSNDIALLQ 206
+ ++ ++L++ +G H T+ + ++ H ++ L DIAL++
Sbjct: 210 LLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 269
Query: 207 LDRPVPLTGTIQPVCLPQKGESFI----GKRGHVVGWGVTS-----FPMGEPSPTLQKLE 257
L +PV + I PVCLP + + G +G V GWG LQ +
Sbjct: 270 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVN 329
Query: 258 VKVLSNARCSTVIEESIGIGMLCA 281
+ ++ C I M CA
Sbjct: 330 LPIVERPVCKDSTRIRITDNMFCA 353
Score = 73.7 bits (181), Expect = 2e-14
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 296 PVGYTKKHLQQFHQGTTYRQPRRRIILGGEADIGEFPWQVAIALDG--MFFCGGALLNEH 353
P+ K + + RI+ G +A+IG PWQV + CG +L+++
Sbjct: 142 PLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDR 201
Query: 354 FVLTAAHCIM-TGGPLTFEQDGYHVLAG 380
+VLTAAHC++ F ++ V G
Sbjct: 202 WVLTAAHCLLYPPWDKNFTENDLLVRIG 229
Score = 56.0 bits (135), Expect = 9e-09
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 365 GGPLTFEQ--DGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP + + GIVS+G GC YT V +WI
Sbjct: 371 GGPFVMKSPFNNRWYQMGIVSWGE-GCD-RDGKYGFYTHVFRLKKWIQ 416
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 119 bits (301), Expect = 3e-31
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 149 CDIDQLRDTPVSELVLHLGDHDLTQLNETS----------HVRRGVRRVLFHSHFHPFVL 198
C ++ + + LG+ + + + G+ + H +
Sbjct: 69 CVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSK 128
Query: 199 S--NDIALLQLDRPVPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQK 255
+DIAL++L+R V T I+PVCLPQ E +G+R VVGWG T G+ S QK
Sbjct: 129 DRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTET--GQYSTIKQK 186
Query: 256 LEVKVLSNARCSTV---IEESIGIGMLCAAPDETQGTC 290
L V V+ +C+ + LCA ++ + +C
Sbjct: 187 LAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSC 224
Score = 72.7 bits (179), Expect = 1e-14
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 314 RQPRRRIILGGEADIGEFPWQVAIALDG-----MFFCGGALLNEHFVLTAAHCIMTGGPL 368
+ +I+ G + EFPW I F CGG+L+N +++TAAHC+ G L
Sbjct: 17 QVEADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCV-AGRVL 75
Query: 369 TFEQDGYHVLAG 380
V G
Sbjct: 76 RVVGALNKVRLG 87
Score = 65.4 bits (160), Expect = 3e-12
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 365 GGPLTFEQ-DGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIHVN 412
GGPL E+ + L G+VS+G C +P +YT+V +Y WI N
Sbjct: 229 GGPLLAERANQQFFLEGLVSFGA-TCG-TEGWPGIYTKVGKYRDWIEGN 275
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 118 bits (297), Expect = 3e-31
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Query: 157 TPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGT 216
+ ++ L +H+G + L++ S V + + ++ F+L ND+AL+ L P+
Sbjct: 47 SNLNRLKVHVGTNYLSE----SGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDL 102
Query: 217 IQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGI 276
+QP+ L E + GWG T G LQ++E+ V +C + +
Sbjct: 103 VQPIKLSTNDEDLESNPCTLTGWGSTRLG-GNTPNALQEIELIVHPQKQCER-DQWRVID 160
Query: 277 GMLCAAPDETQGTC 290
+C +G C
Sbjct: 161 SHICTLTKRGEGAC 174
Score = 72.2 bits (178), Expect = 8e-15
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG +A +G++P+QV++ L G CG ++L+ + VLTAAHC+ L + V
Sbjct: 1 IVGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNL----NRLKVHV 56
Query: 380 GIVSYGVTG 388
G +G
Sbjct: 57 GTNYLSESG 65
Score = 54.9 bits (133), Expect = 7e-09
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL GIVS+G CA+ PD+YTRVS ++ WI+
Sbjct: 179 GGPLVAN----GAQIGIVSFGS-PCAL--GEPDVYTRVSSFVSWIN 217
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 117 bits (296), Expect = 4e-31
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
S + + LG H++ + E + RR + H ++ + NDI LLQL R V + P
Sbjct: 48 SNINVTLGAHNIQR-RENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNP 106
Query: 220 VCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGM 278
V LP+ E G V GWG S M + TL++++++V + +C +
Sbjct: 107 VALPRAQEGLRPGTLCTVAGWGRVS--MRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQ 164
Query: 279 LCA-APDETQGTC 290
+C E +
Sbjct: 165 ICVGDRRERKAAF 177
Score = 62.9 bits (154), Expect = 1e-11
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 321 ILGG-EADIGEFPWQVAIALD---GMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYH 376
I+GG E+ P+ + + G CGG L+ E FVLTAAHC +
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCW---------GSNIN 51
Query: 377 VLAG 380
V G
Sbjct: 52 VTLG 55
Score = 49.8 bits (120), Expect = 3e-07
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +V GIVSYG P+++TRVS ++ WI
Sbjct: 182 GGPLLCN----NVAHGIVSYG-KSSG---VPPEVFTRVSSFLPWIR 219
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 119 bits (300), Expect = 4e-31
Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 8/135 (5%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETS----HVRRGVRRVLFHSHFHPFVLSNDIALLQLDRP 210
V++ L G ++ R V +++ H + +NDIAL+++ P
Sbjct: 51 IKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPP 110
Query: 211 VPLTGTIQPVCLPQKGESF--IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST 268
V I P CLPQ + + V GWG SP LQ+ V ++ C++
Sbjct: 111 VTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNS 170
Query: 269 --VIEESIGIGMLCA 281
I +CA
Sbjct: 171 TRWYNGRIRSTNVCA 185
Score = 63.2 bits (154), Expect = 2e-11
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 321 ILGG-EADIGEFPWQVAI------ALDGMFFCGGALLNEHFVLTAAHCI 362
I+GG +A G +PW V++ CGG+LLN ++LTAAHC
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCF 49
Score = 55.1 bits (133), Expect = 1e-08
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 365 GGPLT--FEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + +V+ GI S+GV GCA P +YT Y+ WI
Sbjct: 200 GGPLMCKDSAENSYVVVGITSWGV-GCA-RAKRPGVYTSTWSYLNWIA 245
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 117 bits (295), Expect = 6e-31
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ LG + L+ + E+ + + H + SND+ L++L+R + T ++P
Sbjct: 46 KVFRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRP 105
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGML 279
+ + S G + V GWG T P LQ L + VLS RC I M
Sbjct: 106 INVSSHCPS-AGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMF 164
Query: 280 CAAPDETQGTC 290
CA + +C
Sbjct: 165 CAGDKAGRDSC 175
Score = 68.7 bits (169), Expect = 1e-13
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Query: 320 IILGGEADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVL 378
II G + D+ PWQ A+ +CG L++ ++LTAAHC + + V
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCR---------KKVFRVR 51
Query: 379 AGIVS 383
G S
Sbjct: 52 LGHYS 56
Score = 57.2 bits (139), Expect = 1e-09
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP+ +G L G+VS+G CA P+ P +YT + ++ +WI
Sbjct: 180 GGPVV--CNG--SLQGLVSWGDYPCA-RPNRPGVYTNLCKFTKWIQ 220
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 117 bits (296), Expect = 7e-31
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 157 TPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGT 216
S+ + LG H + +E GV+ H + P ND+AL++L L
Sbjct: 61 LSPSDFKIILGKHWRLRSDENE-QHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAF 119
Query: 217 IQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGI 276
+ P+CLP+ + G V GWG TL ++E+ ++ ++ C
Sbjct: 120 VMPICLPEGPQQE-GAMVIVSGWGKQFL--QRFPETLMEIEIPIVDHSTCQKAYAPLKKK 176
Query: 277 ---GMLCA 281
M+CA
Sbjct: 177 VTRDMICA 184
Score = 66.9 bits (164), Expect = 8e-13
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 321 ILGG-EADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCI 362
I G A G PW + L+G FCGG+LL +++TAAHC+
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCL 44
Score = 56.5 bits (137), Expect = 2e-09
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Query: 365 GGPL--TFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP+ + G L G VS+G C +Y+ + WI
Sbjct: 199 GGPMVTLNRERGQWYLVGTVSWG-DDCG-KKDRYGVYSYIHHNKDWIQ 244
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 117 bits (295), Expect = 8e-31
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFV--LSNDIALLQLDRPVPLTGTI 217
++ + G+H++ + T +R V R++ H +F+ + ++DIALL+LD P+ L +
Sbjct: 47 VKITVVAGEHNIEETEHTE-QKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYV 105
Query: 218 QPVCLPQKGES---FIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESI 274
P+C+ K + G+V GWG G + LQ L V ++ A C + +I
Sbjct: 106 TPICIADKEYTNIFLKFGSGYVSGWGRVFH-KGRSALVLQYLRVPLVDRATCLRSTKFTI 164
Query: 275 GIGMLCA 281
M CA
Sbjct: 165 TNNMFCA 171
Score = 71.5 bits (176), Expect = 2e-14
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
++GG +A G+FPWQV + FCGG+++NE +++TAAHC+
Sbjct: 1 VVGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCV 43
Score = 61.4 bits (150), Expect = 5e-11
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP E +G L GI+S+G CA M +YT+VS Y+ WI
Sbjct: 186 GGPHVTEVEGTSFLTGIISWG-EECA-MKGKYGIYTKVSRYVNWIK 229
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 116 bits (294), Expect = 9e-31
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
S + + LG H++ + T V+R + H ++P SNDI LLQL+R T +QP
Sbjct: 48 SSINVTLGAHNIKEQEPTQQFIP-VKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQP 106
Query: 220 VCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESI-GIG 277
+ LP G+ V GWG T+ P+G+ S TLQ++++ V + +C + +
Sbjct: 107 LRLPSNKAQVKPGQTCSVAGWGQTA-PLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTI 165
Query: 278 MLCA-APDETQGTC 290
LC P+ + +
Sbjct: 166 ELCVGDPEIKKTSF 179
Score = 62.1 bits (152), Expect = 2e-11
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 321 ILGG-EADIGEFPWQVAIALD---GMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYH 376
I+GG EA P+ + + + CGG L+ + FVLTAAHC +
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCW---------GSSIN 51
Query: 377 VLAG 380
V G
Sbjct: 52 VTLG 55
Score = 50.6 bits (122), Expect = 2e-07
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL V GIVSYG P T+VS ++ WI
Sbjct: 184 GGPLVCN----KVAQGIVSYG-RNNG---MPPRACTKVSSFVHWIK 221
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 117 bits (295), Expect = 1e-30
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+L++ LG++DL + + + ++ V H ++ NDIALL L +P L+ TI P
Sbjct: 48 KKLLVRLGEYDLRRWEKWE-LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVP 106
Query: 220 VCLPQKGES-----FIGKRGHVVGWGVTSF----PMGEPSPTLQKLEVKVLSNARCSTVI 270
+CLP G + G+ V GWG S + L +++ V+ + CS V+
Sbjct: 107 ICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVM 166
Query: 271 EESIGIGMLCA 281
+ MLCA
Sbjct: 167 SNMVSENMLCA 177
Score = 67.3 bits (165), Expect = 5e-13
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 321 ILGG-EADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCI 362
++ G G+ PWQV + CG L++ +VLTAAHC+
Sbjct: 1 LIDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCM 44
Score = 61.1 bits (149), Expect = 7e-11
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP+ G L G+VS+G GC + +YT+VS Y+ WIH
Sbjct: 192 GGPMVASFHGTWFLVGLVSWG-EGCG-LLHNYGVYTKVSRYLDWIH 235
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 116 bits (294), Expect = 1e-30
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 15/137 (10%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHF-HPFVLSNDIALLQLDRPVPL 213
+ S L + +G + T + V H + H NDIAL++L+ V +
Sbjct: 44 QKHDASALDIRMGTLKRLSPHYT---QAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI 100
Query: 214 TGTIQPVCLPQKGESFI---GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC---- 266
I P+CLP+K G GWG+T G + L +++ ++ + +C
Sbjct: 101 NSNITPICLPRKEAESFMRTDDIGTASGWGLTQR--GFLARNLMYVDIPIVDHQKCTAAY 158
Query: 267 --STVIEESIGIGMLCA 281
S+ MLCA
Sbjct: 159 EKPPYPRGSVTANMLCA 175
Score = 69.2 bits (170), Expect = 1e-13
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I GG +A G+FPWQV + G GALL +++VLTAAH + + +
Sbjct: 1 IYGGQKAKPGDFPWQVL--ILGGTTAAGALLYDNWVLTAAHAV---YEQKHDASALDIRM 55
Query: 380 GIVS 383
G +
Sbjct: 56 GTLK 59
Score = 62.3 bits (152), Expect = 3e-11
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 365 GGPLT--FEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GG L + + GIVS+G C +YT+V YI WI
Sbjct: 190 GGALVFLDSETERWFVGGIVSWGSMNCG-EAGQYGVYTKVINYIPWIE 236
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 116 bits (293), Expect = 1e-30
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
L D ++ + LG H L+Q + + V R + H P + +D+ LLQL L
Sbjct: 43 LEDAADGKVQVLLGAHSLSQPEPSKRLYD-VLRAVPHPDSQPDTIDHDLLLLQLSEKATL 101
Query: 214 TGTIQPVCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEE 272
++P+ + G V GWG+ + G +LQ + + VL A C+
Sbjct: 102 GPAVRPLPWQRVDRDVAPGTLCDVAGWGIVN-HAGRRPDSLQHVLLPVLDRATCNRRTHH 160
Query: 273 SIGI--GMLCA 281
I ++CA
Sbjct: 161 DGAITERLMCA 171
Score = 71.8 bits (177), Expect = 1e-14
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
ILGG EA+ P+ ++ L+G CGG L+ E +VL+AAHC+ VL
Sbjct: 1 ILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAAD-----GKVQVLL 55
Query: 380 G 380
G
Sbjct: 56 G 56
Score = 57.2 bits (139), Expect = 1e-09
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL VL G+V+ G C P +YTRV+ Y WI
Sbjct: 184 GGPLVCG----GVLEGVVTSGSRVCG-NRKKPGIYTRVASYAAWID 224
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 116 bits (292), Expect = 2e-30
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 165 HLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQ 224
LG H++ + T V VRR + H ++ L+NDI LL+L R +T + P+ LP+
Sbjct: 53 TLGAHNIMERERTQQVIP-VRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPR 111
Query: 225 KGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGMLCA-A 282
G V GWG + LQ+++++V S +C + I +CA
Sbjct: 112 SLAEVKPGMMCSVAGWGRLG-VNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGD 170
Query: 283 PDETQGTC 290
P + + +
Sbjct: 171 PSKRKNSF 178
Score = 61.4 bits (150), Expect = 5e-11
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 13/64 (20%)
Query: 321 ILGG-EADIGEFPWQVAI---ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYH 376
I+GG EA P+ + CGG L+ E FVLTAAHC+ +
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCL---------GSSIN 51
Query: 377 VLAG 380
V G
Sbjct: 52 VTLG 55
Score = 49.8 bits (120), Expect = 3e-07
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G V GIVSYG + PD+YTR+S ++ WIH
Sbjct: 183 GGPLV--CNG--VAQGIVSYG-RND---GTTPDVYTRISSFLSWIH 220
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 117 bits (294), Expect = 2e-30
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
+ + LG H L +E + V ++ ++ H + DIALLQL RP+ +
Sbjct: 45 SEHHKEAYEVKLGAHQLDSYSEDAKVST-LKDIIPHPSYLQEGSQGDIALLQLSRPITFS 103
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSP-TLQKLEVKVLSNARC------ 266
I+P+ LP SF G V GWG + + +P LQ+LEV ++S C
Sbjct: 104 RYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNI 163
Query: 267 --STVIEESIGIGMLCA 281
+ M+CA
Sbjct: 164 DAKPEEPHFVQEDMVCA 180
Score = 70.8 bits (174), Expect = 5e-14
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I GG A G++PWQV+I +G+ CGG+L++E +VL+AAHC P ++ Y V
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCF----PSEHHKEAYEVKL 56
Query: 380 GIVS 383
G
Sbjct: 57 GAHQ 60
Score = 59.6 bits (145), Expect = 3e-10
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL+ +G L GIVS+G C + P +YT S Y WI
Sbjct: 195 GGPLSCPVEGLWYLTGIVSWGD-ACG-ARNRPGVYTLASSYASWIQ 238
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 122 bits (307), Expect = 3e-30
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
L ++ G + +++ E + V+ ++ H + DIALL+L+ V T
Sbjct: 435 GVESPKILRVYSGILNQSEIKEDTSFFG-VQEIIIHDQYKMAESGYDIALLKLETTVNYT 493
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-STVIEE 272
+ +P+CLP KG+ I V GWG + TLQK ++ +++N C
Sbjct: 494 DSQRPICLPSKGDRNVIYTDCWVTGWGYRK-LRDKIQNTLQKAKIPLVTNEECQKRYRGH 552
Query: 273 SIGIGMLCA 281
I M+CA
Sbjct: 553 KITHKMICA 561
Score = 68.7 bits (168), Expect = 1e-12
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 19/115 (16%)
Query: 284 DETQGTCFVPVSPVGYTKK--HLQQFHQGTTYR----------QPRRRIILGGEADIGEF 331
+E +G C++ +S G K H + G T R + + RI+ G + GE+
Sbjct: 340 NEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTKIKPRIVGGTASVRGEW 399
Query: 332 PWQVAIALDG---MFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLAGIVS 383
PWQV + CGG+++ ++LTAAHC V +GI++
Sbjct: 400 PWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYG----VESPKILRVYSGILN 450
Score = 62.6 bits (152), Expect = 9e-11
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL+ + + L GI S+G GCA P +YT V EY+ WI
Sbjct: 576 GGPLSCKHNEVWHLVGITSWGE-GCA-QRERPGVYTNVVEYVDWIL 619
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 115 bits (291), Expect = 4e-30
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLD----RP 210
P L + LG E + V + + H F NDIALLQL R
Sbjct: 51 ERFPPHHLTVILGRTYRVVPGEEE-QKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRC 109
Query: 211 VPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST- 268
+ ++ VCLP + G+G S L++ V++ ++RC++
Sbjct: 110 AQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQ 169
Query: 269 -VIEESIGIGMLCA 281
++ ++ MLCA
Sbjct: 170 HLLNRTVTDNMLCA 183
Score = 64.2 bits (157), Expect = 7e-12
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 321 ILGG-EADIGEFPWQVAIALDGM------FFCGGALLNEHFVLTAAHCI 362
I GG ADI PWQ AI F CGG L++ ++L+AAHC
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCF 49
Score = 61.5 bits (150), Expect = 6e-11
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL DG L GI+S+G+ GC P +YT+V+ Y+ WI
Sbjct: 204 GGPLVCLNDGRMTLVGIISWGL-GCG-QKDVPGVYTKVTNYLDWIR 247
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 115 bits (290), Expect = 4e-30
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFH---PFVLSNDIALLQLDRPV 211
+ L + LG ++ +RRV H + + DIALL+L+ V
Sbjct: 47 EAQSNASLDVFLGHTNVE--ELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSV 104
Query: 212 PLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVI 270
L + P+CLP + +G G+V G+GV + + L+ + + V + C +
Sbjct: 105 TLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME---EKIAHDLRFVRLPVANPQACENWL 161
Query: 271 EESIGIG-----MLCA 281
+ M CA
Sbjct: 162 RGKNRMDVFSQNMFCA 177
Score = 73.1 bits (180), Expect = 5e-15
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG +A +G FPWQV + G GGALL + ++LTAAH + V
Sbjct: 1 IIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL 58
Query: 380 GIVS 383
G +
Sbjct: 59 GHTN 62
Score = 51.1 bits (123), Expect = 1e-07
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 365 GGPLT--FEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GG V GIVS+G+ GC+ YT+V Y+ WI
Sbjct: 192 GGVFAVRDPNTDRWVATGIVSWGI-GCS---RGYGFYTKVLNYVDWIK 235
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 114 bits (289), Expect = 4e-30
Identities = 32/139 (23%), Positives = 49/139 (35%), Gaps = 12/139 (8%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
+ + LG +DL + S + + + P ND+ LLQLDR L
Sbjct: 43 FQSQNPGVSTVVLGAYDLRRRERQSRQTF-SISSMSENGYDPQQNLNDLMLLQLDREANL 101
Query: 214 TGTIQPVCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEE 272
T ++ + LP + + G R V GWG G S + + V V +C
Sbjct: 102 TSSVTILPLPLQNATVEAGTRCQVAGWGSQR-SGGRLSRFPRFVNVTVTPEDQCRP---- 156
Query: 273 SIGIGMLCA-APDETQGTC 290
+C G C
Sbjct: 157 ----NNVCTGVLTRRGGIC 171
Score = 72.6 bits (179), Expect = 7e-15
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG +A +FP+ +I G FCGGAL++ FV+TAA C + P V+
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGV-----STVVL 55
Query: 380 G 380
G
Sbjct: 56 G 56
Score = 53.7 bits (130), Expect = 2e-08
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
G PL +G + G+ S+ + C PD +TRV+ + WI
Sbjct: 176 GTPLV--CEG--LAHGVASFSLGPCG---RGPDFFTRVALFRDWID 214
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 114 bits (289), Expect = 5e-30
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 159 VSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQ 218
++E +HLG L + R + H + ND+ L++L+ L+ ++
Sbjct: 44 MNEYTVHLGSDTL---GDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVK 100
Query: 219 PVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGM 278
V LP + E G V GWG T+ P L ++VK++S C+ V ++ + M
Sbjct: 101 KVRLPSRCEP-PGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSM 159
Query: 279 LCA 281
LCA
Sbjct: 160 LCA 162
Score = 72.6 bits (179), Expect = 6e-15
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+ G G PWQVA+ CGG L+NE +VLTAAHC + Y V
Sbjct: 1 IIDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCK---------MNEYTVHL 51
Query: 380 GIVS 383
G +
Sbjct: 52 GSDT 55
Score = 57.2 bits (139), Expect = 1e-09
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL G L G+VS+G C P+ P +YT+V ++ +WI+
Sbjct: 177 GGPLV--CRG--TLQGLVSWGTFPCG-QPNDPGVYTQVCKFTKWIN 217
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 114 bits (289), Expect = 6e-30
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ + LG H NE +R + + P L DI L++L RPV + I P
Sbjct: 47 RNIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAP 106
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTV-IEESIGIGM 278
V LP + G R ++GWG S + ++ + C +
Sbjct: 107 VSLPSRSRGV-GSRCRIMGWGKIS--TTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRT 163
Query: 279 LCA 281
LCA
Sbjct: 164 LCA 166
Score = 68.0 bits (167), Expect = 3e-13
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 321 ILGG-EADIGEFPWQVAIALDG--MFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHV 377
++GG E +I E P+ VA+ C GAL+N +VLTAAHC + +
Sbjct: 1 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCD---------RRNIRI 51
Query: 378 LAGI 381
G+
Sbjct: 52 KLGM 55
Score = 57.2 bits (139), Expect = 1e-09
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + GIV+ G C P +YT+V +Y WI
Sbjct: 181 GGPLICN----GEMHGIVAGGSEPCG-QHLKPAVYTKVFDYNNWIQ 221
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 114 bits (288), Expect = 8e-30
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 9/130 (6%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
+ G + S ++RG+RR++ H + DI+L +L PVP T
Sbjct: 45 TYKNPARWTASFGVTI-----KPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYT 99
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEES 273
+ VCLP F G V G+G G L++ +V ++ C+ +
Sbjct: 100 NAVHRVCLPDASYEFQPGDVMFVTGFGALKND-GYSQNHLRQAQVTLIDATTCNEPQAYN 158
Query: 274 IGI--GMLCA 281
I MLCA
Sbjct: 159 DAITPRMLCA 168
Score = 71.1 bits (175), Expect = 2e-14
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
I+GG E + GE+PWQ ++ DG CG L+N ++++AAHC
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCF 43
Score = 59.9 bits (146), Expect = 2e-10
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 365 GGPL-TFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + + LAGIVS+G CA P+ P +YTRV+ WI
Sbjct: 183 GGPLVSSDARDIWYLAGIVSWGD-ECA-KPNKPGVYTRVTALRDWIT 227
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 114 bits (288), Expect = 9e-30
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 165 HLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQ 224
LG H +T+ T + V++ + + P D+ LLQL + + + LP+
Sbjct: 51 ILGAHSITREEPTKQIML-VKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPK 109
Query: 225 KGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEES----IGIGML 279
KG+ G V GWG T S TL+++E+ ++ C+ + IG+ M+
Sbjct: 110 KGDDVKPGTMCQVAGWGRTH-NSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMV 168
Query: 280 CA-APDETQGTC 290
CA + + +C
Sbjct: 169 CAGSLRGGRDSC 180
Score = 69.5 bits (171), Expect = 8e-14
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG E P+ V ++LD C GAL+ + +VLTAAHC V+
Sbjct: 1 IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHC--------NLNKRSQVIL 52
Query: 380 G 380
G
Sbjct: 53 G 53
Score = 51.0 bits (123), Expect = 2e-07
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVT-GCAIMPSYPDLYTRVSE-YIRWIH 410
G PL E V G+ S+G+ C P P +Y +S+ ++ WI
Sbjct: 185 GSPLLCE----GVFRGVTSFGLENKCG-DPRGPGVYILLSKKHLNWII 227
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 114 bits (287), Expect = 1e-29
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ +GD + Q V V+ H+ F DIA+L+L P+ + P
Sbjct: 48 KRFKVRVGDRNTEQEEGGE-AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAP 106
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGML 279
LP + G + + GWG T+ + LQ L+ VLS A+C I M
Sbjct: 107 ASLPTAPPA-TGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMF 165
Query: 280 CA 281
C
Sbjct: 166 CV 167
Score = 69.1 bits (170), Expect = 1e-13
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 321 ILGG-EADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCI 362
I+GG GE PWQ + + FCGG +L+E ++LTAAHC+
Sbjct: 1 IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCL 44
Score = 52.5 bits (127), Expect = 5e-08
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP+ L G+VS+G GCA + P +YT+V Y++WI
Sbjct: 182 GGPVVCN----GQLQGVVSWG-DGCA-QKNKPGVYTKVYNYVKWIK 221
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 113 bits (285), Expect = 2e-29
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ + LG H++ + +E + V H +++ FV+SNDIA+++L PV LT I
Sbjct: 47 GFVDVVLGAHNIRE-DEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIAT 105
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTV---IEESIGI 276
V LP +G GWG+ S S L++++V ++SNA C V + +
Sbjct: 106 VGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDG--- 161
Query: 277 GMLCAAPDETQGTC 290
+C +GTC
Sbjct: 162 -NICIDSTGGKGTC 174
Score = 73.3 bits (181), Expect = 4e-15
Identities = 21/43 (48%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
I+GG EA +P Q A+ +D M+FCGG+L++ ++LTAAHC+
Sbjct: 1 IVGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCM 43
Score = 52.5 bits (127), Expect = 5e-08
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 365 GGPLTFEQDGYHVLAGIVSYG-VTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G + GI S+G GC YPD +TRV+ ++ WI
Sbjct: 179 GGPLN--YNG--LTYGITSFGAAAGCE--AGYPDAFTRVTYFLDWIQ 219
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 113 bits (285), Expect = 2e-29
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
S + + LG+ ++ + + + H ++ L+NDI L++L L +
Sbjct: 44 SGIQVRLGEDNINVVEGNE-QFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVAS 102
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGML 279
+ LP S G + + GWG T L+ L+ +LS++ C + I M
Sbjct: 103 ISLPTSCAS-AGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMF 161
Query: 280 CA 281
CA
Sbjct: 162 CA 163
Score = 69.1 bits (170), Expect = 9e-14
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 11/61 (18%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG P+QV++ G FCGG+L+N +V++AAHC + G V
Sbjct: 1 IVGGYTCGANTVPYQVSL-NSGYHFCGGSLINSQWVVSAAHCY---------KSGIQVRL 50
Query: 380 G 380
G
Sbjct: 51 G 51
Score = 52.9 bits (128), Expect = 3e-08
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP+ G L GIVS+G +GCA + P +YT+V Y+ WI
Sbjct: 178 GGPVV--CSGK--LQGIVSWG-SGCA-QKNKPGVYTKVCNYVSWIK 217
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 113 bits (285), Expect = 2e-29
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ + LG H L E + H ++ +L+ND+ L++LD V + TI+
Sbjct: 45 NSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRS 104
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGML 279
+ + + + G V GWG+ + G LQ + V V+S CS + + M
Sbjct: 105 ISIASQCPT-AGNSCLVSGWGLLA--NGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMF 161
Query: 280 CA 281
CA
Sbjct: 162 CA 163
Score = 72.6 bits (179), Expect = 7e-15
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 320 IILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIM 363
II G + PWQ A+ ++ FC G L++ +VL+AAHC
Sbjct: 1 IINGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQ 44
Score = 56.0 bits (136), Expect = 3e-09
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G L G+VS+G C P +YT + ++ WI
Sbjct: 178 GGPLI--CNG--YLQGLVSFGKAPCGQ-VGVPGVYTNLCKFTEWIE 218
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 113 bits (285), Expect = 2e-29
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 165 HLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQ 224
LG H++ ET + V + + H ++P SNDI LL+L R T ++P+ LP+
Sbjct: 54 TLGAHNIKAKEETQQIIP-VAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPR 112
Query: 225 KGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEES-IGIGMLCA- 281
+ G +V GWG + P GE TL ++++ V + C + + S +C
Sbjct: 113 RNAHVKPGDECYVAGWGKVT-PDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVG 171
Query: 282 APDETQGTC 290
+
Sbjct: 172 DSKIKGASF 180
Score = 61.4 bits (150), Expect = 5e-11
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 14/65 (21%)
Query: 321 ILGG-EADIGEFPWQVAIAL----DGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGY 375
I+GG E P+ FCGG L+ + FVLTAAHC
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK---------GRSM 51
Query: 376 HVLAG 380
V G
Sbjct: 52 TVTLG 56
Score = 50.2 bits (121), Expect = 3e-07
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + AGIVSYG S P ++TRV ++ WI
Sbjct: 185 GGPLVCK----RAAAGIVSYG-QTD---GSAPQVFTRVLSFVSWIK 222
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 112 bits (283), Expect = 4e-29
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLS--NDIALLQLDRPVPLTGTI 217
+ LG H L+ S + V +++ H ++ LS NDIALL+L PV LT I
Sbjct: 51 RTYRVVLGRHSLSTNEPGS-LAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKI 109
Query: 218 QPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS--TVIEESI 274
Q CLP G +V GWG G LQ+ ++ V+ A CS ++
Sbjct: 110 QLGCLPAAGTILPNNYVCYVTGWGRLQ-TNGASPDILQQGQLLVVDYATCSKPGWWGSTV 168
Query: 275 GIGMLCAAPDETQGTC 290
M+CA D +C
Sbjct: 169 KTNMICAGGDGIISSC 184
Score = 60.7 bits (148), Expect = 9e-11
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 321 ILGGE-ADIGEFPWQVAIALDG----MFFCGGALLNEHFVLTAAHCI 362
++GGE A +PWQV++ D CGG L+++ +VLTAAHCI
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCI 47
Score = 58.0 bits (141), Expect = 7e-10
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 365 GGPLT-FEQDGYHVLAGIVSYG-VTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G + GIVS+G GC P ++TRVS YI WI+
Sbjct: 189 GGPLNCQGANGQWQVHGIVSFGSSLGCN-YYHKPSVFTRVSNYIDWIN 235
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 112 bits (282), Expect = 4e-29
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
S + + LG+H++ + RV+ H ++ + + NDI L++L +P L +QP
Sbjct: 44 SRVEVRLGEHNIKVTEGSEQFIS-SSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQP 102
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGML 279
V LP G V GWG T S LQ L + +LS + C+ I M
Sbjct: 103 VALPTSCAPA-GTMCTVSGWGNTMSS-TADSNKLQCLNIPILSYSDCNNSYPGMITNAMF 160
Query: 280 CA 281
CA
Sbjct: 161 CA 162
Score = 68.3 bits (168), Expect = 2e-13
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG E P QV++ G FCGG+L+NE++V++AAHC + V
Sbjct: 1 IVGGYECKAYSQPHQVSL-NSGYHFCGGSLVNENWVVSAAHCY---------KSRVEVRL 50
Query: 380 GIVS 383
G +
Sbjct: 51 GEHN 54
Score = 53.3 bits (129), Expect = 2e-08
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP+ +G L G+VS+G GCA P P +Y +V + W+
Sbjct: 177 GGPVV--CNGE--LQGVVSWG-YGCA-EPGNPGVYAKVCIFNDWLT 216
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 114 bits (288), Expect = 5e-29
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFH---PFVLSNDIALLQLDRPV 211
+ L + LG ++ +RRV H + + DIALL+L+ V
Sbjct: 136 EAQSNASLDVFLGHTNVE--ELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSV 193
Query: 212 PLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVI 270
L + P+CLP + +G G+V G+GV + + L+ + + V + C +
Sbjct: 194 TLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME---EKIAHDLRFVRLPVANPQACENWL 250
Query: 271 EESIGIG-----MLCA 281
+ M CA
Sbjct: 251 RGKNRMDVFSQNMFCA 266
Score = 75.2 bits (185), Expect = 4e-15
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 309 QGTTYRQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPL 368
+ + R+RII G +A +G FPWQV + G GGALL + ++LTAAH +
Sbjct: 79 KPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHE 136
Query: 369 TFEQDGYHVLAGIVS 383
V G +
Sbjct: 137 AQSNASLDVFLGHTN 151
Score = 50.9 bits (122), Expect = 3e-07
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 365 GGPLTFE--QDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GG V GIVS+G+ GC+ YT+V Y+ WI
Sbjct: 281 GGVFAVRDPNTDRWVATGIVSWGI-GCS---RGYGFYTKVLNYVDWIK 324
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 116 bits (291), Expect = 6e-29
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 15/137 (10%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHF-HPFVLSNDIALLQLDRPVPL 213
+ S L + +G + T + V H + H NDIAL++L+ V +
Sbjct: 205 QKHDASALDIRMGTLKRLSPHYT---QAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI 261
Query: 214 TGTIQPVCLPQKGESFI---GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC---- 266
I P+CLP+K G GWG+T G + L +++ ++ + +C
Sbjct: 262 NSNITPICLPRKEAESFMRTDDIGTASGWGLTQ--RGFLARNLMYVDIPIVDHQKCTAAY 319
Query: 267 --STVIEESIGIGMLCA 281
S+ MLCA
Sbjct: 320 EKPPYPRGSVTANMLCA 336
Score = 74.8 bits (184), Expect = 6e-15
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 310 GTTYRQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLT 369
G + R +I G +A G+FPWQV + G GALL +++VLTAAH +
Sbjct: 152 GLSARTTGGQIYGGQKAKPGDFPWQVL--ILGGTTAAGALLYDNWVLTAAHAV---YEQK 206
Query: 370 FEQDGYHVLAGIVS 383
+ + G +
Sbjct: 207 HDASALDIRMGTLK 220
Score = 62.5 bits (152), Expect = 8e-11
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 365 GGPLTF--EQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GG L F + + GIVS+G C +YT+V YI WI
Sbjct: 351 GGALVFLDSETERWFVGGIVSWGSMNCG-EAGQYGVYTKVINYIPWIE 397
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 112 bits (282), Expect = 6e-29
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPF-VLSNDIALLQL----DR 209
P + + LG H + + + G+ + + ++ + F +D+ L++L DR
Sbjct: 44 HSPPRDSVSVVLGQHFFNRTTDVT-QTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 102
Query: 210 PVPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-- 266
+ +QP+CLP+ G +F G + + GWG + S +L++ V ++++ +C
Sbjct: 103 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSS 162
Query: 267 STVIEESIGIGMLCA 281
V I MLCA
Sbjct: 163 PEVYGADISPNMLCA 177
Score = 65.0 bits (159), Expect = 4e-12
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG + G PW AI G FC G+L++ +V++AAHC + +D V+
Sbjct: 1 IIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSH----SPPRDSVSVVL 55
Query: 380 GIVSYGVT 387
G + T
Sbjct: 56 GQHFFNRT 63
Score = 60.7 bits (148), Expect = 1e-10
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL E++G L GI+S+G GC P +YTRV+ Y+ WI+
Sbjct: 192 GGPLACEKNGVAYLYGIISWGD-GCG-RLHKPGVYTRVANYVDWIN 235
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 112 bits (282), Expect = 7e-29
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLS--NDIALLQLDRPVPLTGTI 217
+ +G+H+L Q N T V++++ H +++ ++ DIALL+L + V L +
Sbjct: 51 LTFRVVVGEHNLNQNNGTEQYVG-VQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYV 109
Query: 218 QPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS--TVIEESI 274
Q LP+ G ++ GWG+T G+ + TLQ+ + + A CS + ++
Sbjct: 110 QLGVLPRAGTILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAICSSSSYWGSTV 168
Query: 275 GIGMLCAAPDETQGTC 290
M+CA D + C
Sbjct: 169 KNSMVCAGGDGVRSGC 184
Score = 62.2 bits (152), Expect = 3e-11
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYG-VTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G + + G+ S+ GC + P ++TRVS YI WI+
Sbjct: 189 GGPLHCLVNGQYAVHGVTSFVSRLGCN-VTRKPTVFTRVSAYISWIN 234
Score = 61.1 bits (149), Expect = 7e-11
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 12/68 (17%)
Query: 321 ILGG-EADIGEFPWQVAI----ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGY 375
++GG EA +P Q+++ CGG L+ +++V+TAAHC+ LT +
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV--DRELT-----F 53
Query: 376 HVLAGIVS 383
V+ G +
Sbjct: 54 RVVVGEHN 61
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 111 bits (281), Expect = 7e-29
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLS--NDIALLQLDRPVPLTGTI 217
+ LG+H+L + V V HS ++ ++ DIALL+L+ L +
Sbjct: 51 RTWRVVLGEHNLNTNEGKEQIMT-VNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAV 109
Query: 218 QPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS--TVIEESI 274
Q LP + ++ GWG TS G S +L++ + + +A CS ++
Sbjct: 110 QLAALPPSNQILPNNNPCYITGWGKTS-TGGPLSDSLKQAWLPSVDHATCSSSGWWGSTV 168
Query: 275 GIGMLCA 281
M+CA
Sbjct: 169 KTTMVCA 175
Score = 60.7 bits (148), Expect = 9e-11
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 321 ILGGE-ADIGEFPWQVAIALDG----MFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGY 375
++GG A +PWQ+++ CGG+L+ + +V+TAAHC+ T +
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVD--SART-----W 53
Query: 376 HVLAGIVS 383
V+ G +
Sbjct: 54 RVVLGEHN 61
Score = 59.1 bits (144), Expect = 3e-10
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGV-TGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + +G + + G+ S+ +GC P ++TRVS YI W++
Sbjct: 188 GGPLNCQVNGSYYVHGVTSFVSSSGCN-ASKKPTVFTRVSAYISWMN 233
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 111 bits (280), Expect = 9e-29
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFH---PFVLSNDIALLQLDRPVPLTGT 216
+ + LGDH L ++ + V + + H ++ P S+DI L++L L
Sbjct: 45 QKYSVRLGDHSLQSRDQPEQEIQ-VAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDK 103
Query: 217 IQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGI 276
++PV L G++ + GWG + P TL EVK+ S +C I
Sbjct: 104 VKPVQLANLCPKV-GQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITE 162
Query: 277 GMLCAAPDETQGTC 290
GM+CA TC
Sbjct: 163 GMVCAGSSNGADTC 176
Score = 72.6 bits (179), Expect = 7e-15
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIM 363
IL G E PWQ A+ CGG L+ + +VLTAAHC
Sbjct: 1 ILEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKK 44
Score = 55.6 bits (135), Expect = 4e-09
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + +L GI S+G C P P +YT++ Y WI
Sbjct: 181 GGPLVCD----GMLQGITSWGSDPCGK-PEKPGVYTKICRYTTWIK 221
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 115 bits (289), Expect = 9e-29
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFH---PFVLSNDIALLQLDRPV 211
+ L + LG ++ +RRV H + + DIALL+L+ V
Sbjct: 204 EAQSNASLDVFLGHTNVE--ELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLELENSV 261
Query: 212 PLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVI 270
L + P+CLP + +G G+V G+GV + + L+ + + V + C +
Sbjct: 262 TLGPNLLPICLPDNDTFYDLGLMGYVSGFGVME---EKIAHDLRFVRLPVANPQACENWL 318
Query: 271 EESIGIG-----MLCA 281
+ M CA
Sbjct: 319 RGKNRMDVFSQNMFCA 334
Score = 74.8 bits (184), Expect = 6e-15
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 309 QGTTYRQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPL 368
+ + R++II G +A +G FPWQV + G GGALL + ++LTAAH +
Sbjct: 147 KPVNPVEQRQQIIGGQKAKMGNFPWQVFTNIHG--RGGGALLGDRWILTAAHTLYPKEHE 204
Query: 369 TFEQDGYHVLAGIVS 383
V G +
Sbjct: 205 AQSNASLDVFLGHTN 219
Score = 51.7 bits (124), Expect = 2e-07
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 365 GGPLTFE--QDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GG V GIVS+G+ GC+ YT+V Y+ WI
Sbjct: 349 GGVFAVRDPNTDRWVATGIVSWGI-GCS---RGYGFYTKVLNYVDWIK 392
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 111 bits (280), Expect = 9e-29
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
+ D +V+ +L E ++ S + + NDIA+L+L RP+ L
Sbjct: 45 VFDQKPETIVIQYESTNLW---EDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKL 101
Query: 214 TG-TIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIE 271
G +P LP G V G+G L+ ++ V+ C T
Sbjct: 102 DGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTM-DPKDHDLKSAQLTVVDLDECRTKYG 160
Query: 272 ES-IGIGMLCA 281
+ + + CA
Sbjct: 161 PIFLSLQVFCA 171
Score = 69.2 bits (170), Expect = 1e-13
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 323 GG-EADIGEFPWQVAI---ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTF 370
GG + DI + PW VA+ + CGGA+L++ FVLTAAHC+ P T
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQKPETI 53
Score = 57.2 bits (139), Expect = 1e-09
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
G P + L G+ +Y P+++T+V Y+ WI
Sbjct: 184 GDPTVQQ----DTLVGVAAYFP-KRP--EGAPEVFTKVGSYVSWIQ 222
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 111 bits (279), Expect = 1e-28
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
E+ + LG HD+ + T + V + + H ++ +DI LL+L++ V LT +
Sbjct: 49 REITVILGAHDVRKRESTQQKIK-VEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNV 107
Query: 220 VCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGM 278
V LP + G GWG T S TL+++E++++ C
Sbjct: 108 VPLPSPSDFIHPGAMCWAAGWGKTG-VRDPTSYTLREVELRIMDEKACVDY-RYYEYKFQ 165
Query: 279 LCA-APDETQGTC 290
+C +P +
Sbjct: 166 VCVGSPTTLRAAF 178
Score = 60.6 bits (148), Expect = 7e-11
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 14/65 (21%)
Query: 321 ILGG-EADIGEFPWQVAIALD----GMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGY 375
I+GG E+ P+ + + CGG L++ FVLTAAHC
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK---------GREI 51
Query: 376 HVLAG 380
V+ G
Sbjct: 52 TVILG 56
Score = 49.4 bits (119), Expect = 4e-07
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL V GIVSYG A P ++TRVS Y+ WI+
Sbjct: 183 GGPLLCA----GVAHGIVSYG-HPDA---KPPAIFTRVSTYVPWIN 220
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 111 bits (280), Expect = 1e-28
Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 10/134 (7%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLS--NDIALLQLDRPVP 212
+ + + G + + + V H ++ S NDIA+L L +
Sbjct: 47 DGVLPNNIRVIAGLWQQS--DTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSIS 104
Query: 213 LTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIE 271
L G IQ LP + G + GWG T LQK + V++ A+C+ +
Sbjct: 105 LGGNIQAAVLPANNNNDYAGTTCVISGWGRTD-GTNNLPDILQKSSIPVITTAQCTAAMV 163
Query: 272 ESIGI----GMLCA 281
G +C
Sbjct: 164 GVGGANIWDNHICV 177
Score = 65.7 bits (161), Expect = 2e-12
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 321 ILGG-EADIGEFPWQVAIALDG---MFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYH 376
++GG A GEFPWQ++ CG +LL+ L+A+HC+ P
Sbjct: 1 VIGGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNN-----IR 55
Query: 377 VLAGIVS 383
V+AG+
Sbjct: 56 VIAGLWQ 62
Score = 57.6 bits (140), Expect = 1e-09
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVT---GCAIMPSYPDLYTRVSEYIRWIHVNA 413
GGPL DG + G+ S+ V+ G +P YP +YTRVS Y+ WI N+
Sbjct: 192 GGPLN-CPDGGTRVVGVTSWVVSSGLGAC-LPDYPSVYTRVSAYLGWIGDNS 241
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 110 bits (278), Expect = 1e-28
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
L + LG H+L Q + V R + H + DI LL+L RP L+ IQP
Sbjct: 45 PNLQVFLGKHNLRQRESSQEQSS-VVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQP 103
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGML 279
+ L + S H++GWG T+ G+ T+Q + ++S C I ML
Sbjct: 104 LPLE-RDCSANTTSCHILGWGKTA--DGDFPDTIQCAYIHLVSREECEHAYPGQITQNML 160
Query: 280 CA 281
CA
Sbjct: 161 CA 162
Score = 73.7 bits (182), Expect = 3e-15
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
++ G D P+Q A+ G CGG L++ +VLTAAHC + V
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCK---------KPNLQVFL 51
Query: 380 GIVS 383
G +
Sbjct: 52 GKHN 55
Score = 59.1 bits (144), Expect = 3e-10
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL L G+VS+G C P +YT V Y WI
Sbjct: 177 GGPLVCG----DHLRGLVSWGNIPCG-SKEKPGVYTNVCRYTNWIQ 217
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 111 bits (279), Expect = 2e-28
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 15/138 (10%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
++ L + L + L V R++ H F+ DIALL+L+ PV ++
Sbjct: 49 DVKDLATLRVQLREQHL----YYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNIS 104
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSP-TLQKLEVKVLSNARCS----- 267
+ V LP E+F G V GWG P P L++++V ++ N C
Sbjct: 105 SRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHL 164
Query: 268 ----TVIEESIGIGMLCA 281
I MLCA
Sbjct: 165 GAYTGDDVRIIRDDMLCA 182
Score = 63.8 bits (156), Expect = 8e-12
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 321 ILGGE-ADIGEFPWQVAIALDGMF---FCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYH 376
I+GG+ A ++PWQV++ + + FCGG+L++ +VLTAAHC+
Sbjct: 1 IVGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLAT---LR 57
Query: 377 VLAG 380
V
Sbjct: 58 VQLR 61
Score = 60.7 bits (148), Expect = 9e-11
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + +G + AG+VS+G GCA P+ P +YTRV+ Y+ WIH
Sbjct: 195 GGPLVCKVNGTWLQAGVVSWGE-GCA-QPNRPGIYTRVTYYLDWIH 238
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 112 bits (282), Expect = 2e-28
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFV-LSNDIALLQL----DR 209
P + + LG H + + + G+ + + ++ + F +D+ L++L DR
Sbjct: 79 HSPPRDSVSVVLGQHFFNRTTDVT-QTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 137
Query: 210 PVPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-- 266
+ +QP+CLP+ G +F G + + GWG + S +L++ V ++++ +C
Sbjct: 138 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSS 197
Query: 267 STVIEESIGIGMLCA 281
V I MLCA
Sbjct: 198 PEVYGADISPNMLCA 212
Score = 68.5 bits (168), Expect = 3e-13
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 312 TYRQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFE 371
R RII G + G PW AI G FC G+L++ +V++AAHC P
Sbjct: 28 KRTFLRPRIIGGSSSLPGSHPWLAAI-YIGDSFCAGSLVHTCWVVSAAHCFSHSPPR--- 83
Query: 372 QDGYHVLAGIVSYGVTG 388
D V+ G + T
Sbjct: 84 -DSVSVVLGQHFFNRTT 99
Score = 60.8 bits (148), Expect = 1e-10
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL E++G L GI+S+G GC P +YTRV+ Y+ WI+
Sbjct: 227 GGPLACEKNGVAYLYGIISWGD-GCG-RLHKPGVYTRVANYVDWIN 270
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 113 bits (284), Expect = 2e-28
Identities = 32/150 (21%), Positives = 54/150 (36%), Gaps = 21/150 (14%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLS-------NDIALLQLDRPVP 212
E +++G + V H + + NDIAL++L PV
Sbjct: 126 REPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDPVK 185
Query: 213 LTGTIQPVCLPQKGESFI---GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTV 269
+ T+ P+CLP + G G + GWG T + + L+ + V +C V
Sbjct: 186 MGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTE--KRDRAVRLKAARLPVAPLRKCKEV 243
Query: 270 IEESIGIG---------MLCAAPDETQGTC 290
E M+CA ++ +C
Sbjct: 244 KVEKPTADAEAYVFTPNMICAGGEKGMDSC 273
Score = 70.6 bits (173), Expect = 1e-13
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 314 RQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
+ ++RII G +ADI FPWQV + GGAL+NE++VLTAAH +
Sbjct: 77 FEEKQRIIGGSDADIKNFPWQVFF---DNPWAGGALINEYWVLTAAHVV 122
Score = 53.2 bits (128), Expect = 5e-08
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Query: 365 GGPLTFE---QDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GG + AG+VS+G C LYTRV Y+ WI
Sbjct: 278 GGAFAVQDPNDKTKFYAAGLVSWGP-QCG----TYGLYTRVKNYVDWIM 321
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 110 bits (278), Expect = 2e-28
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 160 SELVLHLGDHDLTQLNETSH-VRRGVRRVLFHSHFHPFVLS--NDIALLQLDRPVPLTGT 216
+ LG++D + L + + + H ++ ++ NDIAL++L R L
Sbjct: 49 RTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDK 108
Query: 217 IQPVCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS--TVIEES 273
+Q LP G+ ++ GWG G LQ+ + + CS +
Sbjct: 109 VQLANLPPAGDILPNEAPCYISGWGRLY-TGGPLPDKLQQALLPTVDYEHCSQWDWWGIT 167
Query: 274 IGIGMLCA 281
+ M+CA
Sbjct: 168 VKKTMVCA 175
Score = 58.8 bits (143), Expect = 5e-10
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 323 GGEADIGEFPWQVAIALDG----MFFCGGALLNEHFVLTAAHCI 362
G +A + WQV++ + CGG+L+ +V+TA HCI
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCI 45
Score = 57.2 bits (139), Expect = 1e-09
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 365 GGPLT-FEQDGYHVLAGIVSYGV-TGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL DG + G+ S+ GC P ++TRVS +I WI
Sbjct: 188 GGPLNCPAADGSWQVHGVTSFVSAFGCN-TIKKPTVFTRVSAFIDWID 234
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 113 bits (285), Expect = 3e-28
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFV------LSNDIALLQLD 208
R+ +S + G + ++ GV+ V++H + PF SNDIAL+ L
Sbjct: 163 RNRVLSRWRVFAGAVAQASPHG---LQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLS 219
Query: 209 RPVPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC- 266
P+PLT IQPVCLP G++ GK V GWG T + G+ + LQ+ V ++SN C
Sbjct: 220 SPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYY-GQQAGVLQEARVPIISNDVCN 278
Query: 267 -STVIEESIGIGMLCA 281
+ I M CA
Sbjct: 279 GADFYGNQIKPKMFCA 294
Score = 74.0 bits (182), Expect = 1e-14
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 314 RQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQD 373
+ P RI+ G + +G +PWQV++ DG CGG+LL+ +VLTAAHC +
Sbjct: 112 KLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVL---S 168
Query: 374 GYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
+ V AG V+ S L V + H
Sbjct: 169 RWRVFAGAVA--------QASPHGLQLGVQAVV--YH 195
Score = 57.1 bits (138), Expect = 3e-09
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 365 GGPL----TFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP + + L GIVS+G GCA + P +YT+VS++ WI
Sbjct: 309 GGPFVCEDSISRTPRWRLCGIVSWGT-GCA-LAQKPGVYTKVSDFREWIF 356
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 109 bits (275), Expect = 4e-28
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ + G DL +S V+ +VL F D AL++L +P+ QP
Sbjct: 46 TSITATGGVVDL---QSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPIN-----QP 97
Query: 220 VCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTV-IEESIGIGM 278
++ V GWG G L K V +S+A C + + M
Sbjct: 98 TLKIATTTAYNQGTFTVAGWGANREG-GSQQRYLLKANVPFVSDAACRSSSSFILVANEM 156
Query: 279 LCA 281
+CA
Sbjct: 157 ICA 159
Score = 66.1 bits (162), Expect = 1e-12
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
++GG A GEFP+ V + CGGAL + VLTAAHC+
Sbjct: 1 VVGGTRAAQGEFPFMVRL----SMGCGGALYAQDIVLTAAHCV 39
Score = 59.1 bits (144), Expect = 3e-10
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 365 GGPL-TFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGP+ + V GIVS+G GCA +YT VS + I
Sbjct: 174 GGPMFRKDNADEWVQVGIVSWGE-GCA-RKGKYGVYTEVSTFASAIA 218
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 109 bits (275), Expect = 4e-28
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
S + G T + + + V H + +ND+A+L+L +P
Sbjct: 44 SGYAQSGFQIRAGSLSRT----SGGITSSLSSVRVHPSYSGN--NNDLAILKLSTSIPSG 97
Query: 215 GTIQPVCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC-STVIEE 272
G I L G + G V GWG TS L K+ V ++S A C +
Sbjct: 98 GNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTS 157
Query: 273 SIGIGMLCA 281
+I M CA
Sbjct: 158 AITNQMFCA 166
Score = 72.6 bits (179), Expect = 7e-15
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG A G+FP+ V+I+ +G +CGG+LLN + VLTAAHC+ G+ + A
Sbjct: 1 IVGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQ-----SGFQIRA 55
Query: 380 GIVSYGVTG 388
G +S G
Sbjct: 56 GSLSRTSGG 64
Score = 56.8 bits (138), Expect = 2e-09
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIHVNA 413
GGP+ + L G VS+G GCA P+Y +Y V +I A
Sbjct: 181 GGPIV-DSSNT--LIGAVSWG-NGCA-RPNYSGVYASVGALRSFIDTYA 224
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 110 bits (276), Expect = 5e-28
Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 10/136 (7%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLS--NDIALLQLDRP-- 210
+ +++LG L + ++ V ++ H + L+ NDIALL++
Sbjct: 50 DYPKKEDYIVYLGRSRLNSNTQGE-MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEG 108
Query: 211 --VPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC- 266
+ TIQ + LP G + G+G + L+ VK++S+ C
Sbjct: 109 RCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQ 168
Query: 267 -STVIEESIGIGMLCA 281
+ MLCA
Sbjct: 169 QPHYYGSEVTTKMLCA 184
Score = 65.0 bits (159), Expect = 3e-12
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Query: 321 ILGG-EADIGEFPWQVAI-----ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDG 374
I+GG I PW AI + CGG+L++ +V++A HC + +++
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFID----YPKKED 56
Query: 375 YHVLAGIVSYGVT 387
Y V G
Sbjct: 57 YIVYLGRSRLNSN 69
Score = 60.4 bits (147), Expect = 1e-10
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL G L GIVS+G GCA + P +YTRVS ++ WI
Sbjct: 199 GGPLVCSLQGRMTLTGIVSWGR-GCA-LKDKPGVYTRVSHFLPWIR 242
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 109 bits (275), Expect = 6e-28
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVL-----------SNDIALLQLD 208
+ + LG ++ + + R V + + H F+ +L SND+ LL+L
Sbjct: 48 DKYQVWLGKNNFLEDEPSD-QHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLS 106
Query: 209 RPVPLTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST 268
+P +T ++P+ LP + G GWG T+ + LQ + +K+L N C
Sbjct: 107 KPADITDVVKPITLPTEEPKL-GSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDK 165
Query: 269 VIEESIGIGMLCA 281
E + MLCA
Sbjct: 166 AHEMKVTDAMLCA 178
Score = 76.9 bits (190), Expect = 3e-16
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
Query: 319 RIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVL 378
+ PW VA+ + CGG LL+ ++VLTAAHC D Y V
Sbjct: 3 PPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCY---------NDKYQVW 53
Query: 379 AGIVS 383
G +
Sbjct: 54 LGKNN 58
Score = 58.4 bits (142), Expect = 6e-10
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + +L GI S+G C P+ P +YT++ ++ WI
Sbjct: 193 GGPLICD----GILQGITSWGPEPCGE-PTEPSVYTKLIKFSSWIR 233
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 109 bits (274), Expect = 6e-28
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 165 HLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQ 224
LG H++T+ E + + V + H ++ L +DI LL+L LT + + P
Sbjct: 54 TLGAHNITE-EEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPS 112
Query: 225 KGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIGIGMLCA-A 282
+ G+ V GWG T + S TLQ+++++++ CS + LC
Sbjct: 113 QFNFVPPGRMCRVAGWGRTG-VLKPGSDTLQEVKLRLMDPQACSH-FRDFDHNLQLCVGN 170
Query: 283 PDETQGTC 290
P +T+
Sbjct: 171 PRKTKSAF 178
Score = 61.8 bits (151), Expect = 3e-11
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 14/65 (21%)
Query: 321 ILGG-EADIGEFPWQVAIAL----DGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGY 375
I+GG E P+ + + FCGG L+ +FVLTAAHC
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA---------GRSI 51
Query: 376 HVLAG 380
V G
Sbjct: 52 TVTLG 56
Score = 48.7 bits (117), Expect = 8e-07
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL V GIVSYG A P ++TR+S Y WI+
Sbjct: 183 GGPLLCA----GVAQGIVSYG-RSDA---KPPAVFTRISHYRPWIN 220
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 108 bits (273), Expect = 1e-27
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFV-LSNDIALLQLDRPVPLTGTIQ 218
++L L LG H L ++ + ++ + H + P L ND+ALLQLD V + TI+
Sbjct: 48 AQLRLVLGLHTL----DSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIR 103
Query: 219 PVCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARC--STVIEESIG 275
P+ LP K + G R + GWG+T G S L++L+++VL C S S+
Sbjct: 104 PLALPSKRQVVAAGTRCSMAGWGLTH-QGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLS 162
Query: 276 IGMLCA 281
M+C
Sbjct: 163 PSMVCL 168
Score = 68.8 bits (169), Expect = 2e-13
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
I+GG E P+ ++ +G CGG L++ +VLTAAHC+
Sbjct: 1 IIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCL 43
Score = 58.7 bits (143), Expect = 4e-10
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL VLAG++S+ C P + T V+ Y+ WI
Sbjct: 183 GGPLV--CGKGRVLAGVLSFSSRVCT-DIFKPPVATAVAPYVSWIR 225
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 108 bits (273), Expect = 1e-27
Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
+ S + LG H L V R+ DIALL+L P +T
Sbjct: 63 KSPRPSSYKVILGAHQEVNLEPHV-QEIEVSRLFLEPTR------KDIALLKLSSPAVIT 115
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS--TVIE 271
+ P CLP + GWG T + L++ ++ V+ N C+ +
Sbjct: 116 DKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLN 173
Query: 272 ESIGIGMLCA 281
+ LCA
Sbjct: 174 GRVQSTELCA 183
Score = 65.7 bits (161), Expect = 2e-12
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 319 RIILGGEADIGEFPWQVAIALD-GMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHV 377
R++ G A +PWQV++ GM FCGG L++ +VLTAAHC+ + Y V
Sbjct: 17 RVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSS----YKV 72
Query: 378 LAGIVS 383
+ G
Sbjct: 73 ILGAHQ 78
Score = 60.3 bits (147), Expect = 1e-10
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + ++L G+ S+G+ GCA P+ P +Y RVS ++ WI
Sbjct: 198 GGPLVCFEKDKYILQGVTSWGL-GCA-RPNKPGVYVRVSRFVTWIE 241
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 108 bits (273), Expect = 1e-27
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFV-----------LSNDIALLQLD 208
+ + LG H+L++ +T+ + V F + +S+D+ LL+L
Sbjct: 45 DDYQIWLGRHNLSKDEDTAQFHQ-VSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLA 103
Query: 209 RPVPLTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST 268
+P +T ++ + LP + G + GWG+ S S TLQ +E+++ SN +C+
Sbjct: 104 QPARITDAVKILDLPTQEPKL-GSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCAR 162
Query: 269 VIEESIGIGMLCA-APDETQGTC 290
E + +LCA D++ C
Sbjct: 163 AYPEKMTEFVLCATHRDDSGSIC 185
Score = 73.0 bits (180), Expect = 5e-15
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 10/61 (16%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG E + PWQVA+ G F CGG L++ +VLTAAHC+ D Y +
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCM---------SDDYQIWL 51
Query: 380 G 380
G
Sbjct: 52 G 52
Score = 54.9 bits (133), Expect = 9e-09
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GG L DG V GI S+G + CA + ++T+V + +WI
Sbjct: 190 GGALI--CDG--VFQGITSWGYSECA-DFNDNFVFTKVMPHKKWIK 230
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 109 bits (274), Expect = 1e-27
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLS--NDIALLQLDRP-- 210
+ +++LG L + ++ V ++ H + L+ NDIALL++
Sbjct: 73 DYPKKEDYIVYLGRSRLNSNTQGE-MKFEVENLILHKDYSADTLAHHNDIALLKIRSKEG 131
Query: 211 --VPLTGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS 267
+ TIQ +CLP G + G+G + L+ VK++S+ C
Sbjct: 132 RCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQ 191
Query: 268 --TVIEESIGIGMLCA 281
+ MLCA
Sbjct: 192 QPHYYGSEVTTKMLCA 207
Score = 71.6 bits (176), Expect = 3e-14
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 310 GTTYRQPRRRIILGGEADIGEFPWQVAI-----ALDGMFFCGGALLNEHFVLTAAHCIMT 364
G +PR +II G I PW AI + CGG+L++ +V++A HC +
Sbjct: 14 GQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFID 73
Query: 365 GGPLTFEQDGYHVLAGIVSYGVT 387
+++ Y V G
Sbjct: 74 ----YPKKEDYIVYLGRSRLNSN 92
Score = 60.8 bits (148), Expect = 1e-10
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL G L GIVS+G GCA + P +YTRVS ++ WI
Sbjct: 222 GGPLVCSLQGRMTLTGIVSWG-RGCA-LKDKPGVYTRVSHFLPWIR 265
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 113 bits (283), Expect = 3e-27
Identities = 34/134 (25%), Positives = 50/134 (37%), Gaps = 10/134 (7%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
LR + + D + V V R++FH +++ NDIAL+++ +
Sbjct: 364 LRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNK 423
Query: 214 TGT----IQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST 268
P C+P F V GWG E +LQ EVK++SN CS
Sbjct: 424 KDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREK--DNERVFSLQWGEVKLISN--CSK 479
Query: 269 V-IEESIGIGMLCA 281
M CA
Sbjct: 480 FYGNRFYEKEMECA 493
Score = 71.1 bits (174), Expect = 2e-13
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 261 LSNARCSTVIEESIGIGMLCAAPDETQGTCFVPVSPVGYTKKHLQQFHQGTTYRQPRR-- 318
C T +E G A +ET+ + K L + G R R
Sbjct: 261 NGEVDCITGEDEVGCAGFASVAQEETEILTADMDAERRRIKSLLPKLSCGVKNRMHIRRK 320
Query: 319 RIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCI 362
RI+ G A +G+ PWQVAI CGG + ++LTAAHC+
Sbjct: 321 RIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCL 364
Score = 57.6 bits (139), Expect = 3e-09
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 365 GGPLT-FEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + + + G+VS+G C P +P +YT+V+ Y WI
Sbjct: 508 GGPLVCMDANNVTYVWGVVSWGE-NCGK-PEFPGVYTKVANYFDWIS 552
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 106 bits (268), Expect = 3e-27
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
+ + V + + LG H+L++ E + V+R+ F + + P L NDI +LQL+ +
Sbjct: 43 VANVNVRAVRVVLGAHNLSR-REPTRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATI 100
Query: 214 TGTIQPVCLPQKGESFI-GKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEE 272
+Q LP +G G + +GWG+ + LQ+L V V+++ C
Sbjct: 101 NANVQVAQLPAQGRRLGNGVQCLAMGWGLLG-RNRGIASVLQELNVTVVTSL-CRR---- 154
Query: 273 SIGIGMLCA-APDETQGTC 290
+C G C
Sbjct: 155 ----SNVCTLVRGRQAGVC 169
Score = 70.6 bits (174), Expect = 2e-14
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG A +P+ V++ L G FCG L+ +FV++AAHC+ V+
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRA-----VRVVL 55
Query: 380 G 380
G
Sbjct: 56 G 56
Score = 58.3 bits (142), Expect = 4e-10
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
G PL +G ++ GI S+ GCA YPD + V++++ WI
Sbjct: 174 GSPLV--CNG--LIHGIASFVRGGCA-SGLYPDAFAPVAQFVNWID 214
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 106 bits (268), Expect = 5e-27
Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
+ T S++ +H G T T +++ + +HP + N+ A+++ + P+ L
Sbjct: 43 VDGTKPSDISIHYGSSYRT----TKGTSVMAKKI-YIVRYHPLTMQNNYAVIETEMPIKL 97
Query: 214 TG-TIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIE 271
T + + LP V GWG T+F E S L + V+ C +
Sbjct: 98 DDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYK 157
Query: 272 ESIGIG-----MLCA 281
+ + CA
Sbjct: 158 QIEADKYIYDGVFCA 172
Score = 74.9 bits (185), Expect = 1e-15
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG ++DI + PW V + +D FCGG++L +FV+TAA C+ P +
Sbjct: 1 IIGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKP-----SDISIHY 55
Query: 380 G 380
G
Sbjct: 56 G 56
Score = 55.7 bits (135), Expect = 4e-09
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
G P Q+G L G+ SY +P ++ RV Y+ I
Sbjct: 187 GDPAV--QNG--TLVGVASYIS-SMP--SEFPSVFLRVGYYVLDIK 225
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 107 bits (269), Expect = 9e-27
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 11/126 (8%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ + + + + V H + ND++LL+L+ P+ G P
Sbjct: 100 RNITVKTYFNRT----SQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLP 155
Query: 220 VCLPQKGES----FIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIG 275
VC P+K + RG + GW + +L V ++ C V+ ++
Sbjct: 156 VCTPEKDFAEHLLIPRTRGLLSGWARNG---TDLGNSLTTRPVTLVEGEECGQVLNVTVT 212
Query: 276 IGMLCA 281
C
Sbjct: 213 TRTYCE 218
Score = 70.1 bits (172), Expect = 9e-14
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 317 RRRIILGGEADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCI 362
D+ + PWQV + +G FCGG ++ E+FVLT A C
Sbjct: 50 GVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCS 96
Score = 60.9 bits (148), Expect = 1e-10
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
G +T E G L G++ ++ L T+VS Y W
Sbjct: 230 GSVVTREHRGSWFLTGVLGSQ--PVG-GQAHMVLVTKVSRYSLWFK 272
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 106 bits (266), Expect = 9e-27
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVL-----------SNDIALLQLD 208
+ + LG ++L + + R VR+ H + P ++ SND+ LL L
Sbjct: 43 NNYQVLLGRNNLFKDEPFAQRRL-VRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLS 101
Query: 209 RPVPLTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST 268
P +TG ++ + LP K G GWG T+ S LQ + + +LSN +C
Sbjct: 102 EPADITGGVKVIDLPTKEPKV-GSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIE 160
Query: 269 VIEESIGIGMLCA 281
++++ MLCA
Sbjct: 161 TYKDNVTDVMLCA 173
Score = 68.4 bits (168), Expect = 2e-13
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 12/61 (19%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG + + PWQVA + + CGG L++ +V+TAAHC + Y VL
Sbjct: 1 IVGGYKCEKNSQPWQVA--VINEYLCGGVLIDPSWVITAAHCY---------SNNYQVLL 49
Query: 380 G 380
G
Sbjct: 50 G 50
Score = 54.9 bits (133), Expect = 8e-09
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL DG VL GI S G T CA P P +Y ++ ++ WI
Sbjct: 188 GGPLI--CDG--VLQGITSGGATPCAK-PKTPAIYAKLIKFTSWIK 228
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 107 bits (270), Expect = 1e-26
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 11/126 (8%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+ + + + + V H + ND++LL+L+ P+ G P
Sbjct: 141 RNITVKTYFNRT----SQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLP 196
Query: 220 VCLPQKGES----FIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEESIG 275
VC P+K + RG + GW + +L V ++ C V+ ++
Sbjct: 197 VCTPEKDFAEHLLIPRTRGLLSGWARNG---TDLGNSLTTRPVTLVEGEECGQVLNVTVT 253
Query: 276 IGMLCA 281
C
Sbjct: 254 TRTYCE 259
Score = 70.5 bits (173), Expect = 9e-14
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Query: 295 SPVGYTKKHLQQFHQGTTYRQPRRRIILGGEADIGEFPWQVAI-ALDGMFFCGGALLNEH 353
GY + D+ + PWQV + +G FCGG ++ E+
Sbjct: 69 CAQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLTNSEGKDFCGGVIIREN 128
Query: 354 FVLTAAHCI 362
FVLT A C
Sbjct: 129 FVLTTAKCS 137
Score = 60.5 bits (147), Expect = 2e-10
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
G +T E G L G++ ++ L T+VS Y W
Sbjct: 271 GSVVTREHRGSWFLTGVLGSQ--PVG-GQAHMVLVTKVSRYSLWFK 313
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 106 bits (266), Expect = 1e-26
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 159 VSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVL-----------SNDIALLQL 207
V + + LG + L Q ++ R V + H F+ +L S+D+ LL+L
Sbjct: 44 VDQYEVWLGKNKLFQEEPSAQHRL-VSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRL 102
Query: 208 DRPVPLTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS 267
+P +T ++P+ LP K G + GWG + + LQ + + +L N C+
Sbjct: 103 SKPADITDVVKPIALPTKEPK-PGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCA 161
Query: 268 TVIEESIGIGMLCA 281
V + + MLCA
Sbjct: 162 KVYLQKVTDVMLCA 175
Score = 74.5 bits (184), Expect = 2e-15
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
++GG + PWQVA+ CGG LL+ ++VLTAAHC D Y V
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCY---------VDQYEVWL 51
Query: 380 GIVS 383
G
Sbjct: 52 GKNK 55
Score = 57.6 bits (140), Expect = 9e-10
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + +L G SYG C P P +YT + ++ WI
Sbjct: 190 GGPLICD----GILQGTTSYGPVPCGK-PGVPAIYTNLIKFNSWIK 230
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 105 bits (264), Expect = 1e-26
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 154 LRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
LRD P + + LG H++ T V +V + ++ NDI L+QL P L
Sbjct: 46 LRDIPQRLVNVVLGAHNVRTQEPTQQHFS-VAQVFLN-NYDAENKLNDILLIQLSSPANL 103
Query: 214 TGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEE 272
+ ++ V LPQ+ + G + +GWG P+ LQ+L V V++
Sbjct: 104 SASVATVQLPQQDQPVPHGTQCLAMGWGRVG-AHDPPAQVLQELNVTVVTFFCRPH---- 158
Query: 273 SIGIGMLCA-APDETQGTC 290
+C P G C
Sbjct: 159 -----NICTFVPRRKAGIC 172
Score = 64.5 bits (158), Expect = 4e-12
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 321 ILGG-EADIGEFPWQVAIAL---DGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYH 376
I+GG EA P+ ++ + G FCGG L++ FVLTAAHC+ +
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRL-----VN 55
Query: 377 VLAG 380
V+ G
Sbjct: 56 VVLG 59
Score = 57.5 bits (140), Expect = 7e-10
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL DG ++ GI S+ + GCA +PD +TRV+ Y+ WI
Sbjct: 177 GGPLI--CDG--IIQGIDSFVIWGCA-TRLFPDFFTRVALYVDWIR 217
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 105 bits (264), Expect = 2e-26
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVL-----------SNDIALLQLD 208
++ V+ LG H L +T V + V H + +L S+D+ LL+L
Sbjct: 45 NKSVILLGRHSLFHPEDTGQVFQ-VSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLS 103
Query: 209 RPVPLTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST 268
P LT ++ + LP + + G + GWG LQ +++ V+SN C+
Sbjct: 104 EPAELTDAVKVMDLPTQEPAL-GTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQ 162
Query: 269 VIEESIGIGMLCA 281
V + + MLCA
Sbjct: 163 VHPQKVTKFMLCA 175
Score = 73.4 bits (181), Expect = 4e-15
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 10/61 (16%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG E + PWQV +A G CGG L++ +VLTAAHCI ++ +L
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCI---------RNKSVILL 51
Query: 380 G 380
G
Sbjct: 52 G 52
Score = 58.0 bits (141), Expect = 6e-10
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G VL GI S+G CA +P P LYT+V Y +WI
Sbjct: 190 GGPLV--CNG--VLQGITSWGSEPCA-LPERPSLYTKVVHYRKWIK 230
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 104 bits (263), Expect = 3e-26
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 10/129 (7%)
Query: 155 RDTPVSELVLHLGDHDLT-QLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
P++ + LG Q E S R V +++ + + LL+L+R V L
Sbjct: 44 CHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSG------SQLVLLKLERSVTL 97
Query: 214 TGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEE 272
+ +CLP + G + + GWG T L + V+SN C+
Sbjct: 98 NQRVALICLPPEWYVVPPGTKCEIAGWGETK--GTGNDTVLNVALLNVISNQECNIKHRG 155
Query: 273 SIGIGMLCA 281
+ +C
Sbjct: 156 RVRESEMCT 164
Score = 63.0 bits (154), Expect = 1e-11
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 321 ILGGEADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
++GG G PW V++ G FCGG+L+ E ++LTA C GY V
Sbjct: 1 VVGGHP--GNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCF---SSCHMPLTGYEVWL 55
Query: 380 GIVSYGVTGCAIMPSYPDLYTRVSEYIR 407
G + V++ +
Sbjct: 56 GTLFQNPQ----HGEPSLQRVPVAKMVC 79
Score = 58.8 bits (143), Expect = 4e-10
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL VL GI+ CA +P ++TRVS ++ WIH
Sbjct: 179 GGPLACFTHNSWVLEGIIIPN-RVCA-RSRWPAVFTRVSVFVDWIH 222
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 104 bits (262), Expect = 4e-26
Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 12/131 (9%)
Query: 155 RDTPVSELVLHLGDHDLTQL-NETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPL 213
+ + LG HD+ +E V ++++ +D+ L++L RP L
Sbjct: 43 PSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEG------SDLVLMKLARPAVL 96
Query: 214 TGTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTVIEE 272
+ + LP G + V GWG T + L+ + ++ N +CS
Sbjct: 97 DDFVSTIDLPNYGSTIPEKTSCSVYGWGYTG--LINYDGLLRVAHLYIMGNEKCSQHHRG 154
Query: 273 SIGI--GMLCA 281
+ + +CA
Sbjct: 155 KVTLNESEICA 165
Score = 68.0 bits (167), Expect = 3e-13
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 321 ILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLAG 380
++ G W V++ CGG+L+ E +VLTA C + Y G
Sbjct: 1 VVNGIPTRTNIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDL-----KDYEAWLG 55
Query: 381 I 381
I
Sbjct: 56 I 56
Score = 60.7 bits (148), Expect = 9e-11
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL EQ ++ G++ G GCA +P+ P ++ RV+ Y +WIH
Sbjct: 180 GGPLVCEQHKMRMVLGVIVPG-RGCA-IPNRPGIFVRVAYYAKWIH 223
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 102 bits (256), Expect = 2e-25
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 13/135 (9%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQP 219
+V++LG + R++ HS F+P ND+AL+++ V T IQP
Sbjct: 51 VSVVVYLGSAVQYE----GEAVVNSERIISHSMFNPDTYLNDVALIKI-PHVEYTDNIQP 105
Query: 220 VCLPQKGE---SFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCSTV-IEESIG 275
+ LP E F V GWG ++ + LQ V+ N RC+ I
Sbjct: 106 IRLPSGEELNNKFENIWATVSGWGQSN----TDTVILQYTYNLVIDNDRCAQEYPPGIIV 161
Query: 276 IGMLCAAPDETQGTC 290
+C + + C
Sbjct: 162 ESTICGDTSDGKSPC 176
Score = 66.5 bits (163), Expect = 9e-13
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 321 ILGG-EADIGEFPWQVAIALD----GMFFCGGALLNEHFVLTAAHCI 362
I+ G EA G FP+Q + + +CGG+L++ ++LTAAHC+
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCV 47
Score = 53.7 bits (130), Expect = 2e-08
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGV-TGCAIMPSYPDLYTRVSEYIRWIHVN 412
GGP ++L G+VS+ GC P ++RV+ Y+ WI N
Sbjct: 181 GGPFV--LSDKNLLIGVVSFVSGAGCE--SGKPVGFSRVTSYMDWIQQN 225
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 101 bits (255), Expect = 4e-25
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 14/134 (10%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVL-----------SNDIALLQLD 208
L LG H+L T+ V H F+ +L S+D+ LL+L
Sbjct: 45 DNYQLWLGRHNLFDDENTA-QFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLT 103
Query: 209 RPVP-LTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCS 267
P +T ++ V LP + G GWG LQ +++K+L N C
Sbjct: 104 EPADTITDAVKVVELPTEEPEV-GSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECK 162
Query: 268 TVIEESIGIGMLCA 281
+ + MLC
Sbjct: 163 KAHVQKVTDFMLCV 176
Score = 73.4 bits (181), Expect = 4e-15
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG E + PWQ A+ F CGG L++ +VLTAAHCI D Y +
Sbjct: 1 IVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCI---------SDNYQLWL 51
Query: 380 G 380
G
Sbjct: 52 G 52
Score = 58.0 bits (141), Expect = 7e-10
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL DG VL G+ S+G C P+ P + RV Y++WI
Sbjct: 191 GGPLM--CDG--VLQGVTSWGYVPCGT-PNKPSVAVRVLSYVKWIE 231
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 103 bits (258), Expect = 6e-24
Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 12/130 (9%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLT 214
+ S + LG H L V R+ DIALL+L P +T
Sbjct: 607 KSPRPSSYKVILGAHQEVNLEPHV-QEIEVSRLFLEPTR------KDIALLKLSSPAVIT 659
Query: 215 GTIQPVCLPQKGESF-IGKRGHVVGWGVTSFPMGEPSPTLQKLEVKVLSNARCST--VIE 271
+ P CLP + GWG T + L++ ++ V+ N C+ +
Sbjct: 660 DKVIPACLPSPNYVVADRTECFITGWGETQ--GTFGAGLLKEAQLPVIENKVCNRYEFLN 717
Query: 272 ESIGIGMLCA 281
+ LCA
Sbjct: 718 GRVQSTELCA 727
Score = 58.5 bits (141), Expect = 2e-09
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL + ++L G+ S+G GCA P+ P +Y RVS ++ WI
Sbjct: 742 GGPLVCFEKDKYILQGVTSWG-LGCAR-PNKPGVYVRVSRFVTWIE 785
Score = 55.4 bits (133), Expect = 2e-08
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 312 TYRQPRRRIILGGEADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTF 370
++ R++ G A +PWQV++ GM FCGG L++ +VLTAAHC+ +
Sbjct: 554 EPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSS 613
Query: 371 EQDGYHVLAGIVS 383
Y V+ G
Sbjct: 614 ----YKVILGAHQ 622
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 90.3 bits (225), Expect = 4e-22
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 165 HLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQ 224
G+ D +E + + +V +S ++ ++NDI LL+L + T+ VCLP
Sbjct: 52 VAGEFDQGSSSEKI-QKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPS 110
Query: 225 KGESF-IGKRGHVVGWGVTSF 244
+ F G GWG+T +
Sbjct: 111 ASDDFAAGTTCVTTGWGLTRY 131
Score = 63.7 bits (156), Expect = 1e-12
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 10/62 (16%)
Query: 321 ILGG-EADIGEFPWQVAI-ALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVL 378
I+ G EA G +PWQV++ G FCGG+L+NE++V+TAAHC V+
Sbjct: 1 IVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHC--------GVTTSDVVV 52
Query: 379 AG 380
AG
Sbjct: 53 AG 54
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 90.3 bits (225), Expect = 7e-22
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 198 LSNDIALLQLDRPVPLTGTIQPVCLPQKGESFIGKRGHVVGWGVT--SFPMGEPSPTLQK 255
S+D+ LL+L P +T ++ + LP + G GWG E +Q
Sbjct: 6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPEL-GSTCEASGWGSIEPGPDDFEFPDEIQC 64
Query: 256 LEVKVLSNARCSTVIEESIGIGMLCA 281
+++ +L N C+ + + MLCA
Sbjct: 65 VQLTLLQNTFCADAHPDKVTESMLCA 90
Score = 52.5 bits (127), Expect = 1e-08
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +G + GI S+G T C + P +YT++ Y+ WI
Sbjct: 105 GGPLI--CNG--MWQGITSWGHTPCG-SANKPSIYTKLIFYLDWID 145
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 94.2 bits (234), Expect = 4e-21
Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 36/153 (23%)
Query: 165 HLGDHDLTQLNETSHVRRGVRRVLFHSHFH---------PFVLSNDIALLQLDRPVPLTG 215
+H + + VLFH +++ P D+AL++L +
Sbjct: 264 DDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQ 323
Query: 216 TIQPVCLPQKGESF-IGKRGHVVGWGVT-----------SFPMGEPSPTLQKLEVKVLSN 263
TI+P+CLP + + + + E L + EV + +
Sbjct: 324 TIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNG 383
Query: 264 ARCST---------------VIEESIGIGMLCA 281
+ + I E + LC
Sbjct: 384 DKKGSCERDAQYAPGYDKVKDISEVVTPRFLCT 416
Score = 69.6 bits (170), Expect = 5e-13
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 308 HQGTTYRQPRRRIILGGEADIGEFPWQVAI----ALDGMFFCGGALLNEHFVLTAAHCI 362
+ + D + PWQ I G C GA+++E+FVLTAAHC
Sbjct: 203 DESQSLSLCGMVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCF 261
Score = 59.2 bits (143), Expect = 1e-09
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 8/54 (14%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVT-GCA-------IMPSYPDLYTRVSEYIRWIH 410
GGPL + + G++S+GV C + D + + + + W+
Sbjct: 433 GGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLK 486
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 85.9 bits (212), Expect = 4e-18
Identities = 26/163 (15%), Positives = 50/163 (30%), Gaps = 45/163 (27%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFH---------PFVLSNDIALL 205
D + + +G + VLFH +++ P D+AL+
Sbjct: 505 VDDKEHSIKVSVGGEK---------RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALI 555
Query: 206 QLDRPVPLTGTIQPVCLPQKGESF------------IGKRGHVVGWGVTSFPMGEPSPTL 253
+L + TI+P+CLP + K + + + + E L
Sbjct: 556 KLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKL 615
Query: 254 QKLEVKVLSNARCST---------------VIEESIGIGMLCA 281
+ EV + + + + I E + LC
Sbjct: 616 TRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCT 658
Score = 64.0 bits (155), Expect = 4e-11
Identities = 32/168 (19%), Positives = 53/168 (31%), Gaps = 23/168 (13%)
Query: 247 GEPSPTLQKLE-----VKVLSNARCSTVIEESIGIG--------MLCAAPDETQGTCFVP 293
G+P + ++ K N R + G+G A+ + + F
Sbjct: 371 GDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKKDNEQHVFKV 430
Query: 294 VSPVGYTKKHLQQFHQGTTYRQPRRRIILGGEADIGEFPWQVAIAL----DGMFFCGGAL 349
Q + + D + PWQ I++ G C GA+
Sbjct: 431 KDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAV 490
Query: 350 LNEHFVLTAAHCIMTGGPLTFEQDGYHVLAGI--VSYGVTGCAIMPSY 395
++E+FVLTAAHC + V G + P+Y
Sbjct: 491 VSEYFVLTAAHCFTVDDK----EHSIKVSVGGEKRDLEIEVVLFHPNY 534
Score = 58.2 bits (140), Expect = 3e-09
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 8/54 (14%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVT-GCA-------IMPSYPDLYTRVSEYIRWIH 410
GGPL + + G++S+GV C + D + + + + W+
Sbjct: 675 GGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLK 728
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 85.0 bits (210), Expect = 4e-18
Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 39/170 (22%)
Query: 155 RDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHPFV---------LSNDIALL 205
S +++GD E + + + F F +DIALL
Sbjct: 268 DGNDHSLWRVNVGDPKSQWGKE-----FLIEKAVISPGFDVFAKKNQGILEFYGDDIALL 322
Query: 206 QLDRPVPLTGTIQPVCLPQKGESFI------GKRGHVVGWGVTSFPMGEPSP-TLQKLEV 258
+L + V ++ +P+CLP E+ + G + + L ++
Sbjct: 323 KLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKL 382
Query: 259 KV-----LSNARCSTVIEESIGI-------------GMLCAAPDETQGTC 290
+ + C+ V+ + + LC+ E + C
Sbjct: 383 NINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPC 432
Score = 75.0 bits (184), Expect = 9e-15
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 318 RRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHV 377
+ +D PW V I C GAL+++ +VLTAAHC + + V
Sbjct: 222 VGNMSANASDQERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRD----GNDHSLWRV 277
Query: 378 LAGIVS------YGVTGCAIMPSY 395
G + + I P +
Sbjct: 278 NVGDPKSQWGKEFLIEKAVISPGF 301
Score = 56.5 bits (136), Expect = 7e-09
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 15/61 (24%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVT----GCA-----------IMPSYPDLYTRVSEYIRWI 409
GG + E+ G+VS+G+ G A +P D + + W+
Sbjct: 437 GGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLFRMQPWL 496
Query: 410 H 410
Sbjct: 497 R 497
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 68.7 bits (169), Expect = 6e-15
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Query: 321 ILGG-EADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQDGYHVLA 379
I+GG E + PWQVAI F CGG L+N +VLTAAHC D Y V
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCK---------NDNYEVWL 51
Query: 380 G 380
G
Sbjct: 52 G 52
Score = 26.3 bits (59), Expect = 4.4
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 160 SELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHFHP 195
+ LG H+L + T+ GV H F+
Sbjct: 45 DNYEVWLGRHNLFENENTA-QFFGVTADFPHPGFNL 79
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 61.0 bits (149), Expect = 4e-12
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 365 GGPLTFEQDGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIH 410
GGPL +++G L GIVS+G + S P +Y RV+ + W+
Sbjct: 48 GGPLVCKKNGAWTLVGIVSWG-SSTC-STSTPGVYARVTALVNWVQ 91
Score = 36.4 bits (85), Expect = 0.002
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 247 GEPSPTLQKLEVKVLSNARCSTVIEESIGIGMLCA 281
LQ+ + +LSN C I M+CA
Sbjct: 1 ANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICA 35
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 42.3 bits (99), Expect = 1e-04
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 320 IILGGE-----ADIGEFPWQVAIALD-GMFFCGGALLNEHFVLTAAHCIMTGGPLTFEQD 373
+++G + A+ P+ + G C G L+ + +LT HC+ ++
Sbjct: 1 VVIGDDGRTKVANTRVAPYNSIAYITFGGSSCTGTLIAPNKILTNGHCVYNTASRSYSAK 60
Query: 374 GYHVLA 379
G
Sbjct: 61 GSVYPG 66
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.3 bits (99), Expect = 3e-04
Identities = 62/405 (15%), Positives = 120/405 (29%), Gaps = 125/405 (30%)
Query: 109 HPARP---SSG-LTCDYDVAIRQDVCA--VRIEFEKVNLARKVGGVCDIDQLRDTPVS-- 160
+ RP S G L V A ++ +F K+ G D D P +
Sbjct: 4 YSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAAD-----DEPTTPA 58
Query: 161 ELVLH-LGDH--DLTQLNETSHVRRGVRRVL--FHSHF------HPFVLSNDI------- 202
ELV LG + L + ++ + + L F + + H
Sbjct: 59 ELVGKFLG-YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLV 117
Query: 203 -----------ALLQLDRPVPLTGT---IQPVCLPQKGESFI----GKRGHVVGW----- 239
A + RP + V +G + + G +G+ +
Sbjct: 118 KTKELIKNYITARIMAKRPFDKKSNSALFRAV---GEGNAQLVAIFGGQGNTDDYFEELR 174
Query: 240 --GVTSFPMGEP-----SPTLQKLEVKVLSNARCSTVIEESIGIGMLCAAPDETQGT--- 289
T + + TL +L + + V + + I P T
Sbjct: 175 DLYQTYHVLVGDLIKFSAETLSEL---IRTTLDAEKVFTQGLNILEWLENPSNTPDKDYL 231
Query: 290 CFVPVS-PV----------------GYTKKHLQQFHQGTTYRQPRRRIILG---GEADIG 329
+P+S P+ G+T L+ + +G T + ++ E D
Sbjct: 232 LSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHS--QGLVTAVAIAETDSW 289
Query: 330 E-FPWQVAIALDGMFFCGGALLNEHFVLTAAHCIM--TGGPLTFEQDGYHVLAGIVSY-- 384
E F V A+ +FF G + T P + +D G+ S
Sbjct: 290 ESFFVSVRKAITVLFFIG----------VRCYEAYPNTSLPPSILEDSLENNEGVPSPML 339
Query: 385 GVTGCAIMPSYPDLYTRVSE---YI---RWIHV-------NAIVT 416
++ + + V++ ++ + + + N +V+
Sbjct: 340 SISNL----TQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVS 380
Score = 37.7 bits (87), Expect = 0.008
Identities = 61/348 (17%), Positives = 101/348 (29%), Gaps = 144/348 (41%)
Query: 29 SDDYDYYDEELPEQLKYLTLFEEKYGKGRGNGGSISDPFYKGSK------------DIMG 76
+D ++ + + + + L F+ G + I+
Sbjct: 286 TDSWESFFVSVRKAITVL--------------------FFIGVRCYEAYPNTSLPPSILE 325
Query: 77 DSSTTGTGLDVNITY--SCGDVSKERVTYFKSPHHPARPSSGLTCDYDVAI------RQD 128
DS G+ + S ++++E+V + + +S L V I +
Sbjct: 326 DSLENNEGVP---SPMLSISNLTQEQVQ-----DYVNKTNSHLPAGKQVEISLVNGAKNL 377
Query: 129 VCA-VRIEFEKVNLA-RKVGGVCDIDQLRDTPVSELVLHLGDHDLTQLNETSHVR--RGV 184
V + +NL RK +DQ R P SE R +
Sbjct: 378 VVSGPPQSLYGLNLTLRKAKAPSGLDQSR-IPFSE-------------------RKLKFS 417
Query: 185 RRVL-----FHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQKGESFIGKRGHVVGW 239
R L FHSH L L+ D L + SF K
Sbjct: 418 NRFLPVASPFHSHL----LVPASDLINKD-------------LVKNNVSFNAK------- 453
Query: 240 GVTSFPMGEPSPTLQKLEVKVL-----SNAR-CSTVIEESIGIGMLCAAP------DETQ 287
+++ V S+ R S I E I + + P + +
Sbjct: 454 ---------------DIQIPVYDTFDGSDLRVLSGSISERI-VDCIIRLPVKWETTTQFK 497
Query: 288 GT---CFVP--VSPVGY-TKKHLQQFHQGTTYRQPRRRIILGGEADIG 329
T F P S +G T ++ GT R+I+ G DI
Sbjct: 498 ATHILDFGPGGASGLGVLTHRNK----DGTGV-----RVIVAGTLDIN 536
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 34.7 bits (79), Expect = 0.033
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 340 DGMFFCGGALLNEH---FVLTAAHCIMTGG 366
G F C ++ V TA HC+ G
Sbjct: 18 QGDFVCSANIVASANQSTVATAGHCLHDGN 47
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 34.0 bits (77), Expect = 0.066
Identities = 9/54 (16%), Positives = 17/54 (31%), Gaps = 12/54 (22%)
Query: 320 IILGGE-----ADIGEFPWQVAIAL------DGMFFCGGALLNEHFVLTAAHCI 362
+IL D + + G F G ++ + +LT H +
Sbjct: 1 VILPNNDRHQITDTTNGHYA-PVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVV 53
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived
antibody, developmental protein, differentiation,
glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Length = 579
Score = 33.8 bits (77), Expect = 0.10
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 18/130 (13%)
Query: 77 DSSTTGTGLDVNITYS--------CGDVSKERVTYFKSPHHPARPSSGLTCDYDVAIRQD 128
D + G G ++ Y C +SP P + L C + + +
Sbjct: 105 DYARQGAG--FSLRYEIFKTGSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPK 162
Query: 129 VCAVRIEFEKVNL----ARKVGGVCDID--QLRDTPVSELVLHLGDHDLTQLNETSHVRR 182
+ ++F +L + G C D + D + +G + T+
Sbjct: 163 -MEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGI-PHVGPLIGKYCGTKTPSELRSST 220
Query: 183 GVRRVLFHSH 192
G+ + FH+
Sbjct: 221 GILSLTFHTD 230
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 34.1 bits (77), Expect = 0.11
Identities = 68/471 (14%), Positives = 118/471 (25%), Gaps = 130/471 (27%)
Query: 5 EDKVKQIKEILAQLSP----------------------SDYSEDNGSDDYDYY------- 35
++++ L +L P Y D ++
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 36 -DEELPEQLKYLTLFEEKYGKGRGNGGSISDPFYKGSKDIMGDSSTTGTGLDVNITYSCG 94
E + E L+ L DP + D NI
Sbjct: 194 SPETVLEMLQKLLY--------------QIDPNWTSRSDHS-----------SNIKLRIH 228
Query: 95 DVSKERVTYFKSPHHPARPSSGLTCDYDVAIRQDVCAVRIEFEKVNLARKV----GGVCD 150
+ E KS + + L +V + + NL+ K+
Sbjct: 229 SIQAELRRLLKSKPY---ENCLLVLL-------NVQNAKA-WNAFNLSCKILLTTRFKQV 277
Query: 151 IDQLRDTPVSELVLHLGDHDLTQLNETSHVRRGVRRVLFHSHF---------HPFVLSND 201
D L + + L LT +E + + + L +P LS
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTP-DEVKSL---LLKYLDCRPQDLPREVLTTNPRRLSI- 332
Query: 202 IALLQLDRPV-----------PLTGTIQPVCLPQKGESFIGKRGHVVGWGVTSFPMGE-- 248
IA D LT I+ L + R V FP
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIE-SSLNVLEPAEY--RKMFDRLSV--FPPSAHI 387
Query: 249 PSPTLQKLEVKVLSNARCSTVIEESIGIGMLCAAPDETQGTCFVPVSPVGYTKK--HLQQ 306
P+ L + V+ + V+ + ++ P E T +P + K +
Sbjct: 388 PTILLSLIWFDVIKSD-VMVVVNKLHKYSLVEKQPKE--STISIPSIYLELKVKLENEYA 444
Query: 307 FHQG--TTYRQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMT 364
H+ Y P+ D + LD F+ H +
Sbjct: 445 LHRSIVDHYNIPKTF-------DSDDLI---PPYLDQYFY-------SHIGHHLKNIEHP 487
Query: 365 GGPLTFEQ---DGYHVLAGIVSYGVTGCAIMPSYPDLYTRVSEYIRWIHVN 412
F D + L + + T S + ++ Y +I N
Sbjct: 488 ERMTLFRMVFLD-FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDN 537
Score = 28.3 bits (62), Expect = 5.6
Identities = 27/222 (12%), Positives = 56/222 (25%), Gaps = 74/222 (33%)
Query: 253 LQKLEVKVLSNARCSTVIEESIGIGMLCAAPDETQGTCFVPVSPVGYTKKHLQQFHQG-- 310
+Q + +LS +I D GT + + + ++ +Q+F +
Sbjct: 38 VQDMPKSILSKEEIDHIIMS----------KDAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87
Query: 311 ------------TTYRQPRRRIILGGEA------DIGEF-PWQVA--------------- 336
T RQP + E D F + V+
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147
Query: 337 -----IALDGMFFCG-----GALLNEH----------FVLTAAHCIMTGGPLTFEQDGYH 376
+ +DG+ G + + F L +C L Q +
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 377 VLAGIVSYGVTGCAIMPSYP----DLYTRVSEYIR-WIHVNA 413
I + + + + ++ + N
Sbjct: 208 Q---IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 31.2 bits (69), Expect = 0.51
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 6/36 (16%)
Query: 334 QVAIALDGMFFCGGALLN------EHFVLTAAHCIM 363
A + G C G+L+N + + LTA HC M
Sbjct: 25 VGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGM 60
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 31.2 bits (70), Expect = 0.59
Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 7/42 (16%)
Query: 327 DIGEFPWQVAIAL------DGMFFCGGALLNEHFVLTAAHCI 362
D + + G F G ++ + +LT H +
Sbjct: 13 DTTNGHYA-PVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVV 53
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET:
FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A*
3nyf_A* 3sm8_A*
Length = 381
Score = 31.4 bits (72), Expect = 0.59
Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 13/91 (14%)
Query: 310 GTTYRQPRRRIILGGEADIGEFPWQVAIALDGMFFCGGALLNEHFVLTAAHCIMT-GGPL 368
+ Y +P ++LG A+ G L+ E LT T G
Sbjct: 252 ESFYLKPDAGMLLGSPANADPVEAHDVQPEQLDIATGMYLIEEATTLTIRRPEHTWAGLR 311
Query: 369 TF------------EQDGYHVLAGIVSYGVT 387
+F +G+ +A YG+
Sbjct: 312 SFVADGDLVAGYAANAEGFFWVAAQGGYGIQ 342
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship,
oxidation-reduct umpolung, thiamine diphosphate,
reaction intermediate; HET: TDM FAD GOL; 1.09A
{Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A*
2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Length = 603
Score = 30.6 bits (70), Expect = 0.98
Identities = 8/28 (28%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 384 YGVTGCAIMPSYPDLYTRVSEYIRWIHV 411
YG+ G +I L I +I V
Sbjct: 30 YGIPGGSINSIMDALSAERDR-IHYIQV 56
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.8 bits (63), Expect = 2.2
Identities = 6/23 (26%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
Query: 6 DKVKQIKEILAQLSPSDYSEDNG 28
+K + +K++ A L Y++D+
Sbjct: 18 EK-QALKKLQASLKL--YADDSA 37
>1kk1_A EIF2gamma; initiation of translation; HET: GNP; 1.80A {Pyrococcus
abyssi} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1kjz_A*
1kk2_A* 1kk3_A* 1kk0_A* 2d74_A 2dcu_A*
Length = 410
Score = 28.4 bits (64), Expect = 4.7
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 6/30 (20%)
Query: 217 IQPVCLPQKGESF-----IGKRGHVVGWGV 241
PVC + G+ IG R ++G+G+
Sbjct: 379 QIPVCA-EPGDRVAISRQIGSRWRLIGYGI 407
>1s0u_A EIF-2-gamma, translation initiation factor 2 gamma subunit; GTPase,
EF-1A, tRNA; 2.40A {Methanocaldococcus jannaschii} SCOP:
b.43.3.1 b.44.1.1 c.37.1.8
Length = 408
Score = 28.4 bits (64), Expect = 5.1
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 6/30 (20%)
Query: 217 IQPVCLPQKGESF-----IGKRGHVVGWGV 241
P+C + G+ +G R ++G+G
Sbjct: 377 KLPICA-EIGDRVAISRRVGSRWRLIGYGT 405
>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus}
SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*
Length = 208
Score = 28.1 bits (63), Expect = 5.1
Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 10 QIKEILAQLSPSDYSEDNGSDDYDYYDEELPEQLKYLTLFEEKYGKGRG--NGGSIS 64
++++ + + Y D Y LP +L G GR G IS
Sbjct: 93 GVRDLHVKYTRMIYMAYETEKD-PYIKSILPGELAKFEKLLATRGNGRNLILGDKIS 148
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A
{Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
PDB: 2dji_A* 1v5f_A* 1v5g_A*
Length = 590
Score = 28.3 bits (64), Expect = 5.2
Identities = 3/28 (10%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 384 YGVTGCAIMPSYPDLYTRVSEYIRWIHV 411
YG+ + + + ++++ V
Sbjct: 23 YGIPSGTLSSLMDAMGEEENN-VKFLQV 49
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger,
initiate translation, tRNA binding, mRNA bindin binding;
HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB:
3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A*
3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Length = 403
Score = 28.0 bits (63), Expect = 6.3
Identities = 7/30 (23%), Positives = 12/30 (40%), Gaps = 5/30 (16%)
Query: 217 IQPVCLPQKGESF-----IGKRGHVVGWGV 241
+PV + I R ++GWG+
Sbjct: 371 RRPVAVWSNNIRTVISRQIAGRWRMIGWGL 400
>1so2_A CGMP-inhibited 3',5'-cyclic phosphodiesterase B; PDE3B
phosphodiesterase, hydrolase; HET: HG9 666; 2.40A {Homo
sapiens} SCOP: a.211.1.2 PDB: 1soj_A*
Length = 420
Score = 28.0 bits (62), Expect = 6.7
Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Query: 179 HVRRGVRRVLFHSHFHPFVLSNDIALLQLDRPVPLTGTIQPVCLPQKGESFIGKRGHVVG 238
+ G R + +H+ H + + + L RPVP I C G+ H
Sbjct: 73 ALENGYRDIPYHNRIHATDVLHAVWYL-TTRPVPGLQQIHNGCGTGNETDSDGRINHGRI 131
Query: 239 WGVTSFPMGEPSPTLQKLE 257
++S P + L
Sbjct: 132 AYISSKSCSNPDESYGCLS 150
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.139 0.427
Gapped
Lambda K H
0.267 0.0799 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,740,109
Number of extensions: 421821
Number of successful extensions: 1498
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1161
Number of HSP's successfully gapped: 301
Length of query: 417
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 321
Effective length of database: 4,021,377
Effective search space: 1290862017
Effective search space used: 1290862017
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.0 bits)