Query psy15064
Match_columns 102
No_of_seqs 129 out of 1059
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 19:31:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fo0_A Actin-related protein 8 99.9 3.1E-27 1E-31 189.2 2.6 84 1-84 505-593 (593)
2 3qb0_A Actin-related protein 4 99.9 2E-26 6.7E-31 184.8 3.0 79 1-80 418-497 (498)
3 3dwl_A Actin-related protein 3 99.9 3.3E-26 1.1E-30 180.0 2.1 79 1-82 331-423 (427)
4 2fxu_A Alpha-actin-1, actin, a 99.9 2.9E-24 9.8E-29 164.6 4.1 78 1-81 298-375 (375)
5 1k8k_A ARP3, actin-like protei 99.9 6.6E-24 2.2E-28 163.9 2.9 78 1-81 320-413 (418)
6 1k8k_B ARP2, actin-like protei 99.9 5.8E-23 2E-27 158.7 1.8 75 1-78 302-388 (394)
7 4am6_A Actin-like protein ARP8 99.7 6.2E-18 2.1E-22 139.0 4.0 56 29-84 600-655 (655)
8 1jce_A ROD shape-determining p 98.0 1.2E-06 4.2E-11 65.3 1.2 48 1-59 282-330 (344)
9 3h1q_A Ethanolamine utilizatio 97.6 1.2E-05 4.2E-10 57.8 0.3 42 1-53 231-272 (272)
10 1dkg_D Molecular chaperone DNA 97.4 1.4E-05 4.8E-10 60.2 -0.8 44 1-55 338-381 (383)
11 3qfu_A 78 kDa glucose-regulate 97.1 4.2E-05 1.4E-09 57.5 -1.5 45 1-55 348-392 (394)
12 2v7y_A Chaperone protein DNAK; 96.7 0.00016 5.6E-09 57.1 -1.1 43 1-54 307-349 (509)
13 3i33_A Heat shock-related 70 k 96.5 0.00039 1.3E-08 52.6 -0.3 45 1-55 356-400 (404)
14 1yuw_A Heat shock cognate 71 k 95.0 0.0041 1.4E-07 49.7 0.1 44 1-54 335-378 (554)
15 2kho_A Heat shock protein 70; 94.6 0.0068 2.3E-07 49.0 0.2 43 1-54 338-380 (605)
16 4gni_A Putative heat shock pro 93.8 0.011 3.7E-07 44.8 -0.1 50 1-56 349-401 (409)
17 3d2f_A Heat shock protein homo 93.6 0.013 4.4E-07 48.1 0.0 43 1-54 339-381 (675)
18 4ehu_A Activator of 2-hydroxyi 92.0 0.026 8.8E-07 40.5 -0.2 43 1-54 211-253 (276)
19 2ych_A Competence protein PILM 91.0 0.078 2.7E-06 39.4 1.5 21 1-21 311-331 (377)
20 4a2a_A Cell division protein F 88.9 0.14 4.8E-06 39.6 1.5 48 1-54 333-392 (419)
21 4b9q_A Chaperone protein DNAK; 84.1 0.24 8.1E-06 39.9 0.4 43 1-54 338-380 (605)
22 2ews_A Pantothenate kinase; PA 67.8 2.1 7.1E-05 31.7 1.5 45 1-53 241-286 (287)
23 2zgy_A Plasmid segregation pro 63.7 1.1 3.9E-05 32.6 -0.6 43 1-53 277-319 (320)
24 1bdg_A Hexokinase; phosphotran 61.4 3.5 0.00012 32.2 1.8 47 3-55 398-446 (451)
25 1hux_A Activator of (R)-2-hydr 53.7 1.9 6.5E-05 31.0 -0.8 43 1-54 213-255 (270)
26 2yhx_A Hexokinase B; transfera 50.6 13 0.00044 29.1 3.4 48 2-55 389-442 (457)
27 1nbw_A Glycerol dehydratase re 47.4 7.3 0.00025 32.0 1.5 22 1-22 555-576 (607)
28 2aa4_A Mannac kinase, putative 45.8 5.9 0.0002 28.0 0.7 48 2-53 239-286 (289)
29 2d0o_A DIOL dehydratase-reacti 45.6 7.5 0.00026 32.0 1.4 22 1-22 553-574 (610)
30 3f9m_A Glucokinase; hexokinase 42.4 14 0.00049 29.2 2.5 41 8-55 420-460 (470)
31 4htl_A Beta-glucoside kinase; 40.6 17 0.00059 26.0 2.5 49 1-54 242-290 (297)
32 4db3_A Glcnac kinase, N-acetyl 39.2 18 0.0006 26.3 2.4 50 1-53 274-324 (327)
33 4apw_A ALP12; actin-like prote 38.2 4.3 0.00015 29.9 -1.0 41 1-54 283-323 (329)
34 2jsh_A Appetite-regulating hor 38.0 6.9 0.00024 19.0 0.0 13 61-73 9-21 (26)
35 3hm8_A Hexokinase-3; glucose, 37.5 25 0.00086 27.6 3.2 41 8-55 396-436 (445)
36 3o8m_A Hexokinase; rnaseh-like 34.5 23 0.00078 28.1 2.5 42 8-55 422-469 (485)
37 3vov_A Glucokinase, hexokinase 33.2 12 0.00041 26.9 0.7 49 2-53 243-293 (302)
38 2gup_A ROK family protein; sug 32.8 5.6 0.00019 28.2 -1.2 50 1-53 232-285 (292)
39 3htv_A D-allose kinase, alloki 30.4 34 0.0012 24.6 2.8 57 2-61 245-305 (310)
40 2hoe_A N-acetylglucosamine kin 27.1 20 0.00069 26.6 1.0 49 2-53 320-369 (380)
41 2qm1_A Glucokinase; alpha-beta 26.8 12 0.00042 26.7 -0.2 49 2-53 268-319 (326)
42 1cza_N Hexokinase type I; stru 26.3 27 0.00093 29.6 1.8 42 7-55 866-907 (917)
43 2yka_B ORF57 protein, 52 kDa i 32.2 14 0.00048 17.6 0.0 16 80-95 7-22 (26)
44 1abz_A Alpha-T-alpha, ATA; de 24.0 41 0.0014 17.3 1.6 13 12-24 4-16 (40)
45 2r0j_A Ubiquitin carrier prote 23.9 16 0.00055 23.9 -0.0 14 11-24 1-14 (149)
46 3r8e_A Hypothetical sugar kina 23.5 13 0.00043 27.0 -0.7 49 2-53 266-317 (321)
47 2fsj_A Hypothetical protein TA 22.7 7.9 0.00027 28.6 -2.0 43 1-54 301-343 (346)
48 2lc0_A Putative uncharacterize 22.6 6.2 0.00021 26.0 -2.3 61 12-76 36-106 (132)
49 1cza_N Hexokinase type I; stru 21.8 22 0.00077 30.1 0.4 46 3-55 413-459 (917)
50 2awf_A Ubiquitin-conjugating e 21.6 1.2E+02 0.004 20.2 4.0 14 11-24 17-30 (172)
51 2bep_A Ubiquitin-conjugating e 21.5 38 0.0013 22.3 1.4 13 12-24 9-21 (159)
52 2i7n_A Pantothenate kinase 1; 21.1 32 0.0011 26.2 1.1 48 1-53 310-358 (360)
53 2hjv_A ATP-dependent RNA helic 20.9 42 0.0014 21.4 1.5 14 89-102 92-105 (163)
54 1y8x_A Ubiquitin-conjugating e 20.3 1.3E+02 0.0044 19.7 4.0 34 10-47 5-38 (160)
No 1
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.93 E-value=3.1e-27 Score=189.16 Aligned_cols=84 Identities=24% Similarity=0.500 Sum_probs=78.0
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCc-----cEEEEecCCCCCcccceeehhhhhccccccccccccHHHHhhcCchh
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASM-----KLKLISANGSAERRFGAWIGGSILASIGTFQQMWISSQEYEEGGKGQ 75 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~-----~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~~Itk~eY~E~G~~i 75 (102)
||+||+|+||||.+||++||+.++|..+ +|+|+++|+..||++++|+||||||++++|+++||||+||+|+|+++
T Consensus 505 vltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~i 584 (593)
T 4fo0_A 505 LVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRM 584 (593)
T ss_dssp EEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHH
T ss_pred EEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeECHHHHHhhCcHH
Confidence 6899999999999999999999999654 58999976667999999999999999999999999999999999999
Q ss_pred hhhhccccc
Q psy15064 76 VDRKCPRAF 84 (102)
Q Consensus 76 ~~rk~~~~~ 84 (102)
|++||.+.|
T Consensus 585 l~~kc~f~~ 593 (593)
T 4fo0_A 585 LRERAAFVW 593 (593)
T ss_dssp HHHHCSSCC
T ss_pred HhhcCCcCC
Confidence 999999765
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2e-26 Score=184.79 Aligned_cols=79 Identities=34% Similarity=0.784 Sum_probs=74.8
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccccccccccccHHHHhhcCc-hhhhhh
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASIGTFQQMWISSQEYEEGGK-GQVDRK 79 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~~Itk~eY~E~G~-~i~~rk 79 (102)
||+||+|+||||.+||++||++++| .++++|+++++++++.+++|+||||||++++|+++||||+||+|+|+ +++++|
T Consensus 418 vLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~k 496 (498)
T 3qb0_A 418 VLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDR 496 (498)
T ss_dssp EEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHT
T ss_pred EEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhcccc
Confidence 6999999999999999999999999 88999999544479999999999999999999999999999999999 899999
Q ss_pred c
Q psy15064 80 C 80 (102)
Q Consensus 80 ~ 80 (102)
|
T Consensus 497 c 497 (498)
T 3qb0_A 497 F 497 (498)
T ss_dssp T
T ss_pred C
Confidence 8
No 3
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=3.3e-26 Score=179.96 Aligned_cols=79 Identities=28% Similarity=0.450 Sum_probs=72.6
Q ss_pred CeeccCCCCCChHHHHHHHHhhhC--------------CCCccEEEEecCCCCCcccceeehhhhhccccccccccccHH
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRI--------------PASMKLKLISANGSAERRFGAWIGGSILASIGTFQQMWISSQ 66 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~--------------p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~~Itk~ 66 (102)
||+||+|+||||.+||++||++++ |..++|+|++ +++|.|++|+|||+||++++|+++||||+
T Consensus 331 vLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~---~~~r~~s~WiGGSilasl~~f~~~witk~ 407 (427)
T 3dwl_A 331 VLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVIS---HKRQRNAVWFGGSLLAQTPEFGSYCHTKA 407 (427)
T ss_dssp EEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEEC---CTTCTTHHHHHHHHHHHSTTHHHHSEEHH
T ss_pred EEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEec---CCccccceecCceeeccccchhheeEEHH
Confidence 689999999999999999999997 5577899999 78999999999999999999999999999
Q ss_pred HHhhcCchhhhhhccc
Q psy15064 67 EYEEGGKGQVDRKCPR 82 (102)
Q Consensus 67 eY~E~G~~i~~rk~~~ 82 (102)
||+|+|++++++++.+
T Consensus 408 EYeE~G~~iv~~~~~~ 423 (427)
T 3dwl_A 408 DYEEYGASIARRYQIF 423 (427)
T ss_dssp HHHHSCGGGGSCCCC-
T ss_pred HHhhhChHhheecccc
Confidence 9999999999998773
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.89 E-value=2.9e-24 Score=164.58 Aligned_cols=78 Identities=45% Similarity=0.899 Sum_probs=71.4
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccccccccccccHHHHhhcCchhhhhhc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASIGTFQQMWISSQEYEEGGKGQVDRKC 80 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~~Itk~eY~E~G~~i~~rk~ 80 (102)
||+||+|+||||.+||++||..+.|...+++|.. +++|.+++|+||+++++++.|+++||||+||+|+|++++++||
T Consensus 298 vLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~---~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~ 374 (375)
T 2fxu_A 298 VMSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKC 374 (375)
T ss_dssp EEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEEC---CTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC---
T ss_pred EeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEc---CCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhc
Confidence 6899999999999999999999999988899998 7889999999999999999999999999999999999999998
Q ss_pred c
Q psy15064 81 P 81 (102)
Q Consensus 81 ~ 81 (102)
+
T Consensus 375 ~ 375 (375)
T 2fxu_A 375 F 375 (375)
T ss_dssp -
T ss_pred c
Confidence 5
No 5
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.88 E-value=6.6e-24 Score=163.95 Aligned_cols=78 Identities=29% Similarity=0.551 Sum_probs=73.0
Q ss_pred CeeccCCCCCChHHHHHHHHhhhC----------------CCCccEEEEecCCCCCcccceeehhhhhcccccccccccc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRI----------------PASMKLKLISANGSAERRFGAWIGGSILASIGTFQQMWIS 64 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~----------------p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~~It 64 (102)
||+||+|++|||.+||++||..++ |..++++|.. +++|.+++|+|||++|+++.|+++|||
T Consensus 320 vL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~---~~~~~~~~w~Ggsilasl~~f~~~~it 396 (418)
T 1k8k_A 320 VLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVIT---HHMQRYAVWFGGSMLASTPEFYQVCHT 396 (418)
T ss_dssp EEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEEC---CTTCTTHHHHHHHHHTTSHHHHHHSEE
T ss_pred EEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeC---CCccccceeHhHHHHHcCccHhheEEE
Confidence 689999999999999999999886 6677899998 778999999999999999999999999
Q ss_pred HHHHhhcCchhhhhhcc
Q psy15064 65 SQEYEEGGKGQVDRKCP 81 (102)
Q Consensus 65 k~eY~E~G~~i~~rk~~ 81 (102)
|+||+|+|++++++||.
T Consensus 397 k~ey~e~G~~~~~~~~~ 413 (418)
T 1k8k_A 397 KKDYEEIGPSICRHNPV 413 (418)
T ss_dssp HHHHHHHCGGGGGCCCC
T ss_pred HHHHhhhCHHHHhhhcc
Confidence 99999999999999876
No 6
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.86 E-value=5.8e-23 Score=158.70 Aligned_cols=75 Identities=27% Similarity=0.569 Sum_probs=28.2
Q ss_pred CeeccCCCCCChHHHHHHHHhhhC-----------CCCccEEEEecCCCCCcccceeehhhhhccccccc-cccccHHHH
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRI-----------PASMKLKLISANGSAERRFGAWIGGSILASIGTFQ-QMWISSQEY 68 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~-----------p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~-~~~Itk~eY 68 (102)
||+||+|+||||.+||++||..+. |..++++|.. +++|.+++|+|||+++++++|+ ++||||+||
T Consensus 302 vLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~---~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY 378 (394)
T 1k8k_B 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIED---PPRRKHMVFLGGAVLADIMKDKDNFWMTRQEY 378 (394)
T ss_dssp EEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC---------------------------------------
T ss_pred EEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEec---CCCcceeEEhhhHHhhCCcCCccceeecHHHH
Confidence 689999999999999999999988 8888999998 6789999999999999999999 999999999
Q ss_pred hhcCchhhhh
Q psy15064 69 EEGGKGQVDR 78 (102)
Q Consensus 69 ~E~G~~i~~r 78 (102)
+|+|++++++
T Consensus 379 ~e~G~~~~~~ 388 (394)
T 1k8k_B 379 QEKGVRVLEK 388 (394)
T ss_dssp ----------
T ss_pred hhhCHHHHHh
Confidence 9999999987
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.69 E-value=6.2e-18 Score=139.02 Aligned_cols=56 Identities=20% Similarity=0.462 Sum_probs=51.9
Q ss_pred cEEEEecCCCCCcccceeehhhhhccccccccccccHHHHhhcCchhhhhhccccc
Q psy15064 29 KLKLISANGSAERRFGAWIGGSILASIGTFQQMWISSQEYEEGGKGQVDRKCPRAF 84 (102)
Q Consensus 29 ~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~~Itk~eY~E~G~~i~~rk~~~~~ 84 (102)
+|+|+++|+..||++++|+|||+||+++.|+++||||+||+|.|++++++||.+.|
T Consensus 600 ~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~f~y 655 (655)
T 4am6_A 600 PVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCIFTY 655 (655)
T ss_dssp CCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCSSCC
T ss_pred eeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccccCC
Confidence 48999987777889999999999999999999999999999999999999998654
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.01 E-value=1.2e-06 Score=65.28 Aligned_cols=48 Identities=17% Similarity=0.268 Sum_probs=39.0
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc-cccc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI-GTFQ 59 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~-~~~~ 59 (102)
+|+||+|++|||.++|++++.. .+.. +.+|.+++|+|+++++.. +.|+
T Consensus 282 vL~GG~s~~p~l~~~l~~~~~~--------~v~~---~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 282 FLTGGGSLLRGLDTLLQKETGI--------SVIR---SEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp EEESGGGCSBTHHHHHHHHHSS--------CEEE---CSSTTTHHHHHHHHGGGCHHHHT
T ss_pred EEECccccchHHHHHHHHHHCC--------Cccc---cCChHHHHHHHHHHHHhChHHHH
Confidence 5899999999999999999842 2344 568899999999999974 5453
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.56 E-value=1.2e-05 Score=57.79 Aligned_cols=42 Identities=19% Similarity=0.300 Sum_probs=34.7
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
+|+||++++|||.++|++++.. .|.. +.+|.++.++|+++++
T Consensus 231 vL~GG~a~~~~l~~~l~~~l~~--------~v~~---~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 231 YVVGGTAYLTGFSEEFSRFLGK--------EVQV---PIHPLLVTPLGIALFG 272 (272)
T ss_dssp EEESGGGGSTTHHHHHHHHHSS--------CCBC---CSSGGGHHHHHHHTTC
T ss_pred EEECCccchhhHHHHHHHHhCC--------Cccc---cCChHHHHHHHHHhcC
Confidence 5899999999999999999843 2223 5789999999999864
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=97.43 E-value=1.4e-05 Score=60.18 Aligned_cols=44 Identities=9% Similarity=0.171 Sum_probs=36.5
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
+|+||+|++|++.++|++++.. .+.. +.+|.+++|+|+++++.+
T Consensus 338 vL~GG~s~~p~l~~~l~~~~~~--------~v~~---~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 338 ILVGGQTRMPMVQKKVAEFFGK--------EPRK---DVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp EEESGGGGSHHHHHHHHHHHSS--------CCBC---SSCTTTHHHHHHHHHTTT
T ss_pred EEecCccccHHHHHHHHHHhCC--------CCCC---CcChHHHHHHHHHHHHHh
Confidence 5899999999999999999852 1233 567899999999998864
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.08 E-value=4.2e-05 Score=57.46 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=36.1
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
+|+||+|++|++.++|++++.. ..+.. +.+|..++|.|+++++.+
T Consensus 348 vLvGG~s~~p~l~~~l~~~~~~-------~~v~~---~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 348 VLVGGSTRIPKVQQLLESYFDG-------KKASK---GINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp EEESGGGGSHHHHHHHHHHTTT-------CCCBC---CSCTTTHHHHHHHHHHHH
T ss_pred EEECCccccHHHHHHHHHHcCC-------CCCCC---CcCHHHHHHHHHHHHHHh
Confidence 5899999999999999998832 12333 567899999999998853
No 12
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=96.71 E-value=0.00016 Score=57.09 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=35.4
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||+|++|++.++|++++.. .+.. +.+|..++|.||++++.
T Consensus 307 vLvGG~s~~p~v~~~l~~~f~~--------~~~~---~~~p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 307 ILVGGSTRIPAVQEAIKRELGK--------EPHK---GVNPDEVVAIGAAIQGG 349 (509)
T ss_dssp EEESGGGGCHHHHHHHHHHHSS--------CCBC---CSCTTTHHHHHHHHHHH
T ss_pred EEECCcccChHHHHHHHHHhCC--------CcCc---CCCchhhhHhhHHHHHH
Confidence 5899999999999999998842 1223 56788999999999885
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.48 E-value=0.00039 Score=52.57 Aligned_cols=45 Identities=18% Similarity=0.229 Sum_probs=36.1
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
+|+||+|++|++.++|++.+... .+.. +.+|..+++.|+++++.+
T Consensus 356 vLvGG~s~~p~l~~~l~~~~~~~-------~v~~---~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 356 VLVGGSTRIPKIQKLLQDFFNGK-------ELNK---SINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp EEESGGGGCHHHHHHHHHHTTTC-------CCBC---SSCTTTHHHHHHHHHHHH
T ss_pred EEECCccccHHHHHHHHHHcCCC-------CCCC---CcCHHHHHHHHHHHHHHH
Confidence 58999999999999999887321 2333 568899999999998864
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.04 E-value=0.0041 Score=49.70 Aligned_cols=44 Identities=16% Similarity=0.204 Sum_probs=35.0
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||+|++|++.++|++.+... .+.. +.+|..+++.|+++++.
T Consensus 335 vLvGG~srip~v~~~l~~~f~~~-------~v~~---~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 335 VLVGGSTRIPKIQKLLQDFFNGK-------ELNK---SINPDEAVAYGAAVQAA 378 (554)
T ss_dssp EEESGGGGCHHHHHHHHHHTTTC-------CCBC---CSCTTTHHHHHHHHHHH
T ss_pred EEECCcccChHHHHHHHHHcCCC-------cccc---CCCchhHHHHHHHHHHH
Confidence 58999999999999999887432 1223 56788899999999885
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=94.56 E-value=0.0068 Score=48.99 Aligned_cols=43 Identities=9% Similarity=0.138 Sum_probs=34.7
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||+|++|++.++|++.+.. + +.. ..+|..+++.||++.+.
T Consensus 338 vLvGG~srip~v~~~l~~~fg~--~------~~~---~~npd~aVA~GAa~~a~ 380 (605)
T 2kho_A 338 ILVGGQTRMPMVQKKVAEFFGK--E------PRK---DVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp EEESGGGGSHHHHHHHHHHHSS--C------CBC---SSCTTTHHHHHHHHHHT
T ss_pred EEECCcccChHHHHHHHHhcCC--C------cCc---CCCcchHHHHHHHHHHH
Confidence 5899999999999999988842 1 122 56788899999999885
No 16
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=93.77 E-value=0.011 Score=44.82 Aligned_cols=50 Identities=8% Similarity=0.048 Sum_probs=36.9
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEec---CCCCCcccceeehhhhhcccc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISA---NGSAERRFGAWIGGSILASIG 56 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~---~~~~~~~~~aW~Ggsila~~~ 56 (102)
+|+||+|.+|++.++|++.+.. .++|..| ....+|..++=.|+++.+...
T Consensus 349 ~LvGG~s~~p~v~~~l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 349 IMSGGTSNTPRIAANFRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp EEESGGGGCHHHHHHHHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred EEECCccccHHHHHHHHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 5899999999999999987733 2344322 125677888889999988753
No 17
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=93.56 E-value=0.013 Score=48.15 Aligned_cols=43 Identities=12% Similarity=0.236 Sum_probs=34.4
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||+|++|++.++|++.+.. .+.. ..+|..++.+|+++.+.
T Consensus 339 vLvGGssriP~v~~~l~~~fg~--------~~~~---~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 339 EIIGGTTRIPTLKQSISEAFGK--------PLST---TLNQDEAIAKGAAFICA 381 (675)
T ss_dssp EEESGGGGSHHHHHHHHHHHTS--------CEEC---CSCTTTHHHHHHHHHHH
T ss_pred EEECCCccChHHHHHHHHhcCC--------Cccc---cCCcchHHHHHHHHHHH
Confidence 5899999999999999988742 1233 56788889999998875
No 18
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=91.98 E-value=0.026 Score=40.53 Aligned_cols=43 Identities=16% Similarity=0.348 Sum_probs=33.0
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||.+..|++.++|++++. .+++. |++|.+..=+|++++|.
T Consensus 211 vl~GGva~n~~lr~~l~~~~g--------~~~~~---p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 211 VMVGGVARNSGIVRAMAREIN--------TEIIV---PDIPQLTGALGAALYAF 253 (276)
T ss_dssp EEESGGGGCHHHHHHHHHHHT--------SCEEC---CSSGGGHHHHHHHHHHH
T ss_pred EEecCccchHHHHHHHHHHHC--------CCeee---CCCcchHHHHHHHHHHH
Confidence 589999999999999987762 23555 56677765589998873
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=91.00 E-value=0.078 Score=39.44 Aligned_cols=21 Identities=29% Similarity=0.493 Sum_probs=19.5
Q ss_pred CeeccCCCCCChHHHHHHHHh
Q psy15064 1 MILGTALRLMGFPERLNRDLS 21 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~ 21 (102)
+|+||++++||+.++|++++.
T Consensus 311 vL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 311 YLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp EEESGGGGSTTHHHHHHHHHT
T ss_pred EEECccccchhHHHHHHHHhC
Confidence 589999999999999999985
No 20
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=88.95 E-value=0.14 Score=39.59 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=31.9
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEe-----cCC-------CCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLIS-----ANG-------SAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~-----~~~-------~~~~~~~aW~Ggsila~ 54 (102)
||+||+|++||+.+.+++.+.. .+++.. |.. ..+|.|++=+|-.+++.
T Consensus 333 vLtGG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~ 392 (419)
T 4a2a_A 333 VLTGGGAKIPRINELATEVFKS------PVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVS 392 (419)
T ss_dssp EEESGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC--
T ss_pred EEECchhchhhHHHHHHHHHCC------CeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHh
Confidence 5899999999999999988853 233332 111 14677777777766654
No 21
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=84.05 E-value=0.24 Score=39.92 Aligned_cols=43 Identities=9% Similarity=0.145 Sum_probs=31.2
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||+|.+|++.++|++.+... +.. ..+|..++=.|+++.+.
T Consensus 338 vLvGG~sriP~v~~~l~~~fg~~--------~~~---~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 338 ILVGGQTRMPMVQKKVAEFFGKE--------PRK---DVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp EEESGGGGSHHHHHHHHHHHTSC--------CCS---SSCTTTHHHHHHHHHHH
T ss_pred EEeCCccCchHHHHHHHHHhccC--------cCC---CcChhHHHHHhHHHHHH
Confidence 58999999999999999887421 112 34566666678887764
No 22
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=67.77 E-value=2.1 Score=31.73 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=35.1
Q ss_pred Ceecc-CCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhc
Q psy15064 1 MILGT-ALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 1 vL~GG-~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
+++|| .+..|++.++|.+.+.. ...+++. +++++|..=+||++++
T Consensus 241 vf~Gg~l~~n~~l~~~l~~~~~~-----~~~~~~~---p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 241 VYIGSSFHNNALLRKVVEDYTVL-----RGCKPYY---VENGAFSGAIGALYLE 286 (287)
T ss_dssp EEESGGGTTCHHHHHHHHHHHHH-----TTCEEEE---CTTGGGHHHHHHHHTC
T ss_pred EEeCCchhcCHHHHHHHHHHHhh-----CCceEEE---CCCccHHHHHHHHHhC
Confidence 46889 89999999999976544 2457777 7788988888888765
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=63.65 E-value=1.1 Score=32.58 Aligned_cols=43 Identities=9% Similarity=0.244 Sum_probs=26.2
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
+|+||++.+ +.+.| ++..+.. .-++.. +.+|.++.=+|+++++
T Consensus 277 vl~GGga~l--l~~~l----~~~~~~~-~~~~~~---~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 277 MVIGGGAEL--ICDAV----KKHTQIR-DERFFK---TNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EEESTTHHH--HHHHH----HHTSCCC-GGGEEC---CSCGGGHHHHHHHHHH
T ss_pred EEECChHHH--HHHHH----HHHhCCC-CCceee---CCCcHHHHHHHHHHhc
Confidence 589999977 44444 4444321 002344 5678888888887764
No 24
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=61.38 E-value=3.5 Score=32.24 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=33.9
Q ss_pred eccCC--CCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 3 LGTAL--RLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 3 ~GG~s--~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
+||+. ..|.|.++|++.|++++.+..+|.+.. ...++-+||+++|..
T Consensus 398 i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l------~~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 398 VDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRL------SEDGSGKGAAAIAAS 446 (451)
T ss_dssp EESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEE------CTTHHHHHHHHHHTT
T ss_pred EeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEE------CCCccHHHHHHHHHH
Confidence 44443 789999999999998864445566654 345678899988754
No 25
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=53.72 E-value=1.9 Score=31.02 Aligned_cols=43 Identities=19% Similarity=0.341 Sum_probs=32.2
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+++||.+.-|++.+.+.+.+.. .|.. +..+.+..=+|+++++.
T Consensus 213 ~~~GG~a~n~~~~~~~~~~lg~--------~v~~---p~~~~~~~AlGAAl~A~ 255 (270)
T 1hux_A 213 VMTGGVAQNYGVRGALEEGLGV--------EIKT---SPLAQYNGALGAALYAY 255 (270)
T ss_dssp EEESGGGGCHHHHHHHHHHHCS--------CEEC---CGGGGGHHHHHHHHHHH
T ss_pred EEeCccccCHHHHHHHHHHHCC--------CeEe---CCCcchHhHHHHHHHHH
Confidence 4789999999999999877743 2444 55667656679998874
No 26
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=50.60 E-value=13 Score=29.08 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=36.1
Q ss_pred eeccCCCCCChHHHHHHHHhhhCCC------CccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 2 ILGTALRLMGFPERLNRDLSVRIPA------SMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 2 L~GG~s~~pGf~~RL~~EL~~l~p~------~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
+-||...+|+|.+++++.|+++.+. ..+|.+.. ..| .+=+||+++|.+
T Consensus 389 vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~---~~d---gsg~GAAl~aa~ 442 (457)
T 2yhx_A 389 AXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITP---AID---GXGAASXVIXSI 442 (457)
T ss_dssp EESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEE---CCC---TTTHHHHHHHHH
T ss_pred EECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEE---CCC---chhhhHHHHHHH
Confidence 4566788999999999999998754 34677776 333 356799998865
No 27
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=47.36 E-value=7.3 Score=32.02 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=20.1
Q ss_pred CeeccCCCCCChHHHHHHHHhh
Q psy15064 1 MILGTALRLMGFPERLNRDLSV 22 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~ 22 (102)
||+||+|+++|+.+=..+.|..
T Consensus 555 VLTGGsSql~gI~elA~~iL~~ 576 (607)
T 1nbw_A 555 VLVGGSSLDFEIPQLITEALSH 576 (607)
T ss_dssp EEESGGGGSSSHHHHHHHHHHT
T ss_pred EEeCchhhcccHHHHHHHHhCc
Confidence 6999999999999999988876
No 28
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=45.76 E-value=5.9 Score=27.98 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=30.7
Q ss_pred eeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhc
Q psy15064 2 ILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 2 L~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
|.||-+..+-|.++|++++.+..+. ..+.+.. ......+.-+||+.++
T Consensus 239 lgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~---~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 239 VGGSVGLAEGYLALVETYLAQEPAA-FHVDLLA---AHYRHDAGLLGAALLA 286 (289)
T ss_dssp EEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEE---CSCSSCHHHHHHHHHH
T ss_pred EeCcccccHHHHHHHHHHHHHhcCc-cCCEEEE---CCCCCchHHHHHHHHH
Confidence 5566656688999999998876322 2455554 3333445667887765
No 29
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=45.62 E-value=7.5 Score=31.96 Aligned_cols=22 Identities=14% Similarity=0.264 Sum_probs=19.7
Q ss_pred CeeccCCCCCChHHHHHHHHhh
Q psy15064 1 MILGTALRLMGFPERLNRDLSV 22 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~ 22 (102)
||+||+|+++|+.+=..+.|..
T Consensus 553 VLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 553 VLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEESGGGGCSSHHHHHHHHTTT
T ss_pred EEeCchhhcccHHHHHHHHhCc
Confidence 6999999999999999887765
No 30
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=42.35 E-value=14 Score=29.17 Aligned_cols=41 Identities=22% Similarity=0.373 Sum_probs=31.9
Q ss_pred CCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 8 RLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 8 ~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
.+|+|++++++-|+.+.| ..+|.+.. . ...+=+||+++|..
T Consensus 420 ~yp~f~~~~~~~l~~l~~-~~~v~l~~---a---~DGSg~GAAliAa~ 460 (470)
T 3f9m_A 420 LHPSFKERFHASVRRLTP-SCEITFIE---S---EEGSGRGAALVSAV 460 (470)
T ss_dssp HCTTHHHHHHHHHHHHCT-TEEEEEEE---C---SSHHHHHHHHHHHH
T ss_pred hCchHHHHHHHHHHHHcC-CCeEEEEE---c---CCCcHHHHHHHHHH
Confidence 489999999999999885 45677766 3 33467899998865
No 31
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=40.57 E-value=17 Score=25.98 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=33.1
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
||.||-+..+-|-++|++.+...... .+.|.. ..-...+.=+||+.++.
T Consensus 242 vlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~---s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 242 FIGGGITSRPTFIAELKHHMESFGLR--DTIIET---ATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp EEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEE---CSCTTTHHHHHHHHHHH
T ss_pred EEeCcccccHHHHHHHHHHHHHhccC--CCeEEE---CCcCChHHHHhHHHHHH
Confidence 46777777888999999999876543 344544 33345556678877663
No 32
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=39.19 E-value=18 Score=26.33 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=32.3
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCC-CccEEEEecCCCCCcccceeehhhhhc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPA-SMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~-~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
||.||-+..+-|-++|+++|.+.... ...+.|.. ..-...+.=+||+.++
T Consensus 274 vlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~---s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 274 ALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIK---AKHGDSGGVRGAAFLN 324 (327)
T ss_dssp EEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEE---CSCGGGHHHHHHHHTT
T ss_pred EEeCcccchHHHHHHHHHHHHHHhccccCCCEEEE---CCCCCcHHHHHHHHHH
Confidence 35677777777888888888876532 23456665 3334455567887665
No 33
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=38.23 E-value=4.3 Score=29.91 Aligned_cols=41 Identities=15% Similarity=0.293 Sum_probs=26.4
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||++.+ +.+.|++++ |. .+.. .++|.++.=+|.-.++.
T Consensus 283 vltGGGA~l--~~~~l~~~~----~~----~v~v---~~~P~~a~a~G~~~~~~ 323 (329)
T 4apw_A 283 IFIGGTTQK--LKEQISKTY----PN----NSII---TNNSQWTTCEGLYKVAV 323 (329)
T ss_dssp EEESTTHHH--HHHHHHHHS----TT----CEEC---CSSGGGHHHHHHHHHHH
T ss_pred EEECChHHH--HHHHHHHHc----CC----CCEe---cCCChhhHHHHHHHHHh
Confidence 589999988 455555543 31 1333 56788887777766654
No 34
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=38.01 E-value=6.9 Score=19.01 Aligned_cols=13 Identities=23% Similarity=0.642 Sum_probs=10.8
Q ss_pred ccccHHHHhhcCc
Q psy15064 61 MWISSQEYEEGGK 73 (102)
Q Consensus 61 ~~Itk~eY~E~G~ 73 (102)
.-+|-++|+|+|.
T Consensus 9 i~ls~~~y~~yG~ 21 (26)
T 2jsh_A 9 IKLSGAQYQQHGR 21 (26)
T ss_dssp GGGHHHHCSCSSS
T ss_pred eEecHHHHHHHhH
Confidence 4578899999996
No 35
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=37.48 E-value=25 Score=27.61 Aligned_cols=41 Identities=12% Similarity=0.253 Sum_probs=31.4
Q ss_pred CCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 8 RLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 8 ~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
.+|+|.++|++-|+++.|. .+|.+.. ..| .+=+|||++|..
T Consensus 396 ~~P~f~~~l~~~l~~l~~~-~~v~~~~---s~D---GSg~GAAl~AA~ 436 (445)
T 3hm8_A 396 LHPRFSSLVAATVRELAPR-CVVTFLQ---SED---GSGKGAALVTAV 436 (445)
T ss_dssp HCTTHHHHHHHHHHHHCTT-EEEEEEE---CSS---CHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHhCCC-CcEEEEE---CCC---CchHHHHHHHHH
Confidence 4899999999999999874 4677766 333 355899998864
No 36
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=34.47 E-value=23 Score=28.07 Aligned_cols=42 Identities=21% Similarity=0.437 Sum_probs=31.5
Q ss_pred CCCChHHHHHHHHhhhCCC------CccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 8 RLMGFPERLNRDLSVRIPA------SMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 8 ~~pGf~~RL~~EL~~l~p~------~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
.+|+|.+|+++-|+.+++. ..+|.+.. ..| .+=+||+++|.+
T Consensus 422 ~~P~f~~~~~~~l~~ll~~~~~~~~~~~v~l~~---a~D---GSg~GAAliAa~ 469 (485)
T 3o8m_A 422 RYPGYKEKAAQALKDIYNWDVEKMEDHPIQLVA---AED---GSGVGAAIIACL 469 (485)
T ss_dssp HSTTHHHHHHHHHHHHHTCCCCSGGGCSEEEEE---CCC---TTTHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHhccccccCCCceEEEEE---cCC---ChHHHHHHHHHH
Confidence 4799999999999998762 34577766 333 356799998865
No 37
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=33.20 E-value=12 Score=26.93 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=30.1
Q ss_pred eeccCC-CC-CChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhc
Q psy15064 2 ILGTAL-RL-MGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 2 L~GG~s-~~-pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
|.||-+ .. +-|.++|++++.+..+......|.. ..-...+.=+||+.++
T Consensus 243 lgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~---s~lg~~a~~~GAa~l~ 293 (302)
T 3vov_A 243 LGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRR---ARLGAEAGLLGAALTA 293 (302)
T ss_dssp EESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEE---CSSGGGHHHHHHHHHH
T ss_pred EeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEE---cCCCCcHHHHHHHHHH
Confidence 445544 43 4588999999988765433333544 3334455667888766
No 38
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=32.81 E-value=5.6 Score=28.20 Aligned_cols=50 Identities=8% Similarity=0.004 Sum_probs=28.7
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCC----ccEEEEecCCCCCcccceeehhhhhc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPAS----MKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~----~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
||.||-+..+-|.++|++.+.+..+.. ..+.|.. ......+.-+||+.++
T Consensus 232 vlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~---~~~~~~a~~~GAa~~~ 285 (292)
T 2gup_A 232 SLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQA---CTYHADANLYGALVNW 285 (292)
T ss_dssp EEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEE---CSCSTTHHHHHHHHHH
T ss_pred EEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEE---cccCChhhHHHHHHHH
Confidence 355666556677888888887654211 2244444 2223444567887765
No 39
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=30.41 E-value=34 Score=24.65 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=33.1
Q ss_pred eeccCCCCCC-hHHHHHHHHhhhCC---CCccEEEEecCCCCCcccceeehhhhhccccccccc
Q psy15064 2 ILGTALRLMG-FPERLNRDLSVRIP---ASMKLKLISANGSAERRFGAWIGGSILASIGTFQQM 61 (102)
Q Consensus 2 L~GG~s~~pG-f~~RL~~EL~~l~p---~~~~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~ 61 (102)
|.||-+..+. |.++|.+.+++... ....+++.. ..-...+.-+||+.++-...|.+-
T Consensus 245 lgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~---s~lg~~ag~~GAa~la~~~~~~~p 305 (310)
T 3htv_A 245 LGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIA---ASSSDFNGAQGAAILAHQRFLPQF 305 (310)
T ss_dssp EECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEE---CCCCTTHHHHHHHHHHHHHHCC--
T ss_pred EeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEE---cCCCCcHHHHHHHHHHHHHhhccc
Confidence 5566565543 57788888877652 122466665 344456667899887754444443
No 40
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=27.06 E-value=20 Score=26.56 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=28.7
Q ss_pred eeccCCCC-CChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhc
Q psy15064 2 ILGTALRL-MGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 2 L~GG~s~~-pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
|.||-+.. +-|.+++++.+.+..+....+.|.. ......+.-+||+.++
T Consensus 320 lgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~---s~~~~~a~~~GAa~l~ 369 (380)
T 2hoe_A 320 IGGFFKELGENFLKKIKIEVETHLLYKHSVDMSF---SKVQEPVIAFGAAVHA 369 (380)
T ss_dssp EEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEE---CCCCSCHHHHHHHHHH
T ss_pred EcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEE---cCCCCcHHHHHHHHHH
Confidence 45555432 5677888888877654323455554 2333444567888766
No 41
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=26.82 E-value=12 Score=26.69 Aligned_cols=49 Identities=16% Similarity=0.028 Sum_probs=29.4
Q ss_pred eeccCCC-CCChHHHHHHHHhhhCCCCc--cEEEEecCCCCCcccceeehhhhhc
Q psy15064 2 ILGTALR-LMGFPERLNRDLSVRIPASM--KLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 2 L~GG~s~-~pGf~~RL~~EL~~l~p~~~--~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
|.||-+. .+-|.++|++.+++..+... .+.|.. ......+.-+||+.++
T Consensus 268 lgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~---~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 268 IGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKL---AELGNEAGVIGAASLA 319 (326)
T ss_dssp EEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEE---CSSGGGHHHHHHHHHG
T ss_pred EcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEE---cCcCchHHHHHHHHHH
Confidence 4555543 46688888888887654211 345554 3334455667888766
No 42
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=26.27 E-value=27 Score=29.57 Aligned_cols=42 Identities=12% Similarity=0.215 Sum_probs=32.0
Q ss_pred CCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 7 LRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 7 s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
...|+|.+++++.|+++.|. .++.+.. . ...+=+||+++|..
T Consensus 866 ~~~p~f~~~~~~~l~~l~~~-~~v~~~~---~---~dgsg~GAAl~aa~ 907 (917)
T 1cza_N 866 KLHPHFSRIMHQTVKELSPK-CNVSFLL---S---EDGSGKGAALITAV 907 (917)
T ss_dssp HHCTTHHHHHHHHHHHHSTT-EEEEEEE---C---SSCSHHHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHHhCCC-CceEEEE---e---cCChHHHHHHHHHH
Confidence 56899999999999999864 4566655 3 33466899998865
No 43
>2yka_B ORF57 protein, 52 kDa immediate-early phosphoprotein; RNA binding protein-transcription complex, RNA binding prote; NMR {Saimiriine herpesvirus 2}
Probab=32.18 E-value=14 Score=17.61 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=13.0
Q ss_pred ccccccccchhhccCC
Q psy15064 80 CPRAFAGRKNELAGRG 95 (102)
Q Consensus 80 ~~~~~~~~~~~~~~~~ 95 (102)
|.-.|+.++||-+||-
T Consensus 7 cr~nWs~RV~E~~~~r 22 (26)
T 2yka_B 7 CKTSWADRVREAAAQR 22 (26)
Confidence 6667999999988874
No 44
>1abz_A Alpha-T-alpha, ATA; de novo design, helix-turn-helix, peptide; HET: SIN; NMR {} SCOP: k.15.1.1
Probab=24.03 E-value=41 Score=17.30 Aligned_cols=13 Identities=15% Similarity=0.319 Sum_probs=10.7
Q ss_pred hHHHHHHHHhhhC
Q psy15064 12 FPERLNRDLSVRI 24 (102)
Q Consensus 12 f~~RL~~EL~~l~ 24 (102)
++.|.++||+.+-
T Consensus 4 lkarveqelqale 16 (40)
T 1abz_A 4 LKARVEQELQALE 16 (40)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5789999998874
No 45
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=23.91 E-value=16 Score=23.92 Aligned_cols=14 Identities=21% Similarity=0.541 Sum_probs=10.7
Q ss_pred ChHHHHHHHHhhhC
Q psy15064 11 GFPERLNRDLSVRI 24 (102)
Q Consensus 11 Gf~~RL~~EL~~l~ 24 (102)
|...||++|++++.
T Consensus 1 g~~~RL~kEl~~l~ 14 (149)
T 2r0j_A 1 GIPRRITKETQNLA 14 (149)
T ss_dssp -CCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 45689999999873
No 46
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=23.52 E-value=13 Score=26.96 Aligned_cols=49 Identities=12% Similarity=0.099 Sum_probs=30.2
Q ss_pred eeccCCCC-CChHHHHHHHHhhhCCCC--ccEEEEecCCCCCcccceeehhhhhc
Q psy15064 2 ILGTALRL-MGFPERLNRDLSVRIPAS--MKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 2 L~GG~s~~-pGf~~RL~~EL~~l~p~~--~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
|.||-+.. +-|.++|+++|.+..... ..++|.. ..-...+.-+||+.++
T Consensus 266 lgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~---s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 266 LGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGK---ATLENDAGLLGAAGLI 317 (321)
T ss_dssp EESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEE---CSSGGGHHHHHHHHHH
T ss_pred EeChhcccchHHHHHHHHHHHHhcccccCCCCEEEE---cCCCCcHHHHHHHHHH
Confidence 45555544 557788888888766421 2356665 4444556677888765
No 47
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=22.73 E-value=7.9 Score=28.61 Aligned_cols=43 Identities=19% Similarity=0.251 Sum_probs=24.2
Q ss_pred CeeccCCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhcc
Q psy15064 1 MILGTALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILAS 54 (102)
Q Consensus 1 vL~GG~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~ 54 (102)
+|+||++++ +.+ .|++..|. ..+. .. ..+|.++.=+|...++.
T Consensus 301 vL~GGga~l--l~~----~l~~~~~~-~~i~-~~---~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 301 IPVGGGSNL--IGD----RFEEIAPG-TLVK-IK---PEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEESTTHHH--HGG----GGGGGSTT-CBCC-CC---TTTTTTHHHHHHHHHHH
T ss_pred EEECCcHHH--HHH----HHHHHCcC-cEEe-cc---CCCcHHHHHHHHHHHHh
Confidence 589999987 443 34444442 1111 11 45777777677665543
No 48
>2lc0_A Putative uncharacterized protein TB39.8; FHAA, kinase substrate, protein binding; NMR {Mycobacterium tuberculosis}
Probab=22.56 E-value=6.2 Score=26.02 Aligned_cols=61 Identities=16% Similarity=0.092 Sum_probs=40.0
Q ss_pred hHHHHHHHHhhh----------CCCCccEEEEecCCCCCcccceeehhhhhccccccccccccHHHHhhcCchhh
Q psy15064 12 FPERLNRDLSVR----------IPASMKLKLISANGSAERRFGAWIGGSILASIGTFQQMWISSQEYEEGGKGQV 76 (102)
Q Consensus 12 f~~RL~~EL~~l----------~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~~~~~~~~Itk~eY~E~G~~i~ 76 (102)
+..+|++|+... +|..+.|.+.. .....+++|-. .+-..+..+-...+..+.|.-.|+-.+
T Consensus 36 Ia~~L~RE~d~~~~~~~~~r~~aPN~y~V~Ls~---~D~~~l~~~~~-~l~~el~~~l~~~a~~qgy~~~G~v~V 106 (132)
T 2lc0_A 36 VEALLRREAADGIQSLQGNRLLAPNEYIITLGV---HDFEKLGADPE-LKSTGFARDLADYIQEQGWQTYGDVVV 106 (132)
T ss_dssp HHHHHHHHHHHTCBCCCTTCCBCCCEEEEEEEH---HHHHHHCSCSH-HHHHHHHHHHHHHHHHHTCBCSSCCEE
T ss_pred HHHHHHHHHHhCCeEcCCCcEEcCceEEEEeCH---HHHHHHHhhhH-HHHHHHHHHHHHHHHHCCCeecCCeEE
Confidence 678889998654 24445566655 45567777764 444456666666778888888887543
No 49
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=21.83 E-value=22 Score=30.08 Aligned_cols=46 Identities=15% Similarity=0.356 Sum_probs=33.1
Q ss_pred eccCC-CCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhccc
Q psy15064 3 LGTAL-RLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILASI 55 (102)
Q Consensus 3 ~GG~s-~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila~~ 55 (102)
.||-+ ..|.|.++|++.|+++.+. .++++.. . ..++=+||+++|..
T Consensus 413 gGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~---a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 413 DGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLL---S---ESGSGKGAAMVTAV 459 (917)
T ss_dssp ECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEE---C---TTCHHHHHHHHHHH
T ss_pred CCchhhccHHHHHHHHHHHHHhcCC-CceEEEE---e---ccchHHHHHHHHHh
Confidence 34433 4599999999999998754 5667766 3 44567899988854
No 50
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=21.59 E-value=1.2e+02 Score=20.24 Aligned_cols=14 Identities=21% Similarity=-0.062 Sum_probs=11.6
Q ss_pred ChHHHHHHHHhhhC
Q psy15064 11 GFPERLNRDLSVRI 24 (102)
Q Consensus 11 Gf~~RL~~EL~~l~ 24 (102)
....||++|++++.
T Consensus 17 ~~~~rL~kEl~~l~ 30 (172)
T 2awf_A 17 RGSLLLRRQLAELN 30 (172)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56889999999873
No 51
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=21.46 E-value=38 Score=22.33 Aligned_cols=13 Identities=15% Similarity=0.368 Sum_probs=10.8
Q ss_pred hHHHHHHHHhhhC
Q psy15064 12 FPERLNRDLSVRI 24 (102)
Q Consensus 12 f~~RL~~EL~~l~ 24 (102)
-..||++|++++.
T Consensus 9 a~~RL~kEl~~l~ 21 (159)
T 2bep_A 9 AVQRIKREFKEVL 21 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4689999999874
No 52
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=21.12 E-value=32 Score=26.21 Aligned_cols=48 Identities=13% Similarity=0.057 Sum_probs=33.6
Q ss_pred Ceecc-CCCCCChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceeehhhhhc
Q psy15064 1 MILGT-ALRLMGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWIGGSILA 53 (102)
Q Consensus 1 vL~GG-~s~~pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~Ggsila 53 (102)
+++|| -+.-|++.+.|++.|.--... .+++.. +++++|..=+||++..
T Consensus 310 vftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~---~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 310 VFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALF---LEHEGYFGAVGALLEL 358 (360)
T ss_dssp EEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEE---ETTTTCHHHHHHHHHH
T ss_pred EEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEE---cCCccHHHHHHHHHHh
Confidence 46899 899999999999888643322 234454 4567888777777653
No 53
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=20.87 E-value=42 Score=21.39 Aligned_cols=14 Identities=36% Similarity=0.745 Sum_probs=11.4
Q ss_pred hhhccCCCCCCCCC
Q psy15064 89 NELAGRGLDKPDLS 102 (102)
Q Consensus 89 ~~~~~~~~~~~~~~ 102 (102)
-.+++||+|-|+++
T Consensus 92 T~~~~~Gld~~~~~ 105 (163)
T 2hjv_A 92 TDVAARGIDIENIS 105 (163)
T ss_dssp CGGGTTTCCCSCCS
T ss_pred CChhhcCCchhcCC
Confidence 37899999999753
No 54
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=20.27 E-value=1.3e+02 Score=19.73 Aligned_cols=34 Identities=9% Similarity=-0.000 Sum_probs=19.6
Q ss_pred CChHHHHHHHHhhhCCCCccEEEEecCCCCCcccceee
Q psy15064 10 MGFPERLNRDLSVRIPASMKLKLISANGSAERRFGAWI 47 (102)
Q Consensus 10 pGf~~RL~~EL~~l~p~~~~i~v~~~~~~~~~~~~aW~ 47 (102)
.--..||++|++++.+. ..+.+.. +.+....-|.
T Consensus 5 ~~~~~RL~kEl~~l~~~-~~~~~~~---~~~~~l~~w~ 38 (160)
T 1y8x_A 5 SAAQLRIQKDINELNLP-KTCDISF---SDPDDLLNFK 38 (160)
T ss_dssp CHHHHHHHHHHHTCCCC-TTEEEEC---SSTTCTTEEE
T ss_pred cHHHHHHHHHHHhcCCC-CCeEEEe---ccCCccceEE
Confidence 34568999999998542 2344432 1223445565
Done!