RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15065
(773 letters)
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like
protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A
{Rattus norvegicus} PDB: 3qkz_A*
Length = 316
Score = 562 bits (1450), Expect = 0.0
Identities = 180/357 (50%), Positives = 225/357 (63%), Gaps = 45/357 (12%)
Query: 419 PFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGDAIAQK 478
FV K P+ GLGTWKS G+VK+AV AID GYRH DCA+VY+NE EVG+AI +K
Sbjct: 3 TFVKLRTKAKMPLVGLGTWKSPPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEK 62
Query: 479 LKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKALQNL 538
+K+ V+REDL+I SKLW+TF L+K A QKTL +LKLDYLDLYLIHWPQ +
Sbjct: 63 IKEKAVRREDLFIVSKLWSTFFEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQ----- 117
Query: 539 KLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSDANYV 598
G P D+ GK L S + ++
Sbjct: 118 --------------------------------------AGKEFLPKDSQGKVLMSKSTFL 139
Query: 599 DTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGT--IKPVVNQVECHPYLTQHKLKQW 656
D W ME+LV GLVK++GVSNFN QI+ +L+K KPV NQVECHPYLTQ KL Q+
Sbjct: 140 DAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKLIQY 199
Query: 657 CEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQQGNI 716
C + I + AYSPLGSPDRP+AKP DP +L+ PKIKEIAAK+ KT AQ+LI++ VQ+
Sbjct: 200 CHSKGIAVIAYSPLGSPDRPYAKPEDPVVLEIPKIKEIAAKHKKTIAQVLIRFHVQRNVA 259
Query: 717 CIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKDYPFNIEF 773
IPKSVT S I+EN Q+FDF+L+ ED+ I S NRN R L D +D+PF+ E+
Sbjct: 260 VIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLNRNWRACGLFVTSDEEDFPFHEEY 316
Score = 411 bits (1060), Expect = e-139
Identities = 127/287 (44%), Positives = 184/287 (64%), Gaps = 17/287 (5%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
++S +V EAV AID GYRHFDCAY YQNE ++GEAIQ+KI + + RED+FI +KLW
Sbjct: 21 WKSPPGQVKEAVKAAIDAGYRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDLFIVSKLW 80
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
TF+ L+++ Q++L L++DY++LYL+HWP ++G + +P + GK +
Sbjct: 81 STFF-EKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSK-STF 138
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVA--RIKPVTNQARYLFLIEVHPYLT 182
+D W+ ME LVD+GL +++GVSNFN Q+E LL + KPVTNQ +E HPYLT
Sbjct: 139 LDAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQ------VECHPYLT 192
Query: 183 QKKMAAFCRDNDLVITAYSPLSNPTNPFRAK-VPFVLEDQTVKDIASRYDKTPAQI---- 237
Q+K+ +C + + AYSPL +P P+ P VLE +K+IA+++ KT AQ+
Sbjct: 193 QEKLIQYCHSKGIAVIAYSPLGSPDRPYAKPEDPVVLEIPKIKEIAAKHKKTIAQVLIRF 252
Query: 238 --QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
Q +PKSVT S ++EN +FDF+LS+EDM + L+ N R C
Sbjct: 253 HVQRNVAVIPKSVTLSHIKENIQVFDFQLSEEDMAAILSLNRNWRAC 299
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT;
0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A*
1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A*
2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A*
2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Length = 316
Score = 561 bits (1448), Expect = 0.0
Identities = 194/362 (53%), Positives = 242/362 (66%), Gaps = 48/362 (13%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGD 473
MA + NNG K PI GLGTWKS G+V +AV AID+GYRHIDCAHVY+NE+EVG
Sbjct: 1 MA---SRILLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGV 57
Query: 474 AIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYK 533
AI +KL++ VVKRE+L+I SKLW T+H LVK A QKTL +LKLDYLDLYLIHWP +K
Sbjct: 58 AIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFK 117
Query: 534 ALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYS 593
G FP D +G + S
Sbjct: 118 -------------------------------------------PGKEFFPLDESGNVVPS 134
Query: 594 DANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGT--IKPVVNQVECHPYLTQH 651
D N +DTW ME+LV +GLVK+IG+SNFN Q++ IL+K KP VNQ+ECHPYLTQ
Sbjct: 135 DTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQE 194
Query: 652 KLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQV 711
KL Q+C+ + I++TAYSPLGSPDRPWAKP DPSLL+DP+IK IAAK+NKT+AQ+LI++ +
Sbjct: 195 KLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPM 254
Query: 712 QQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKDYPFNI 771
Q+ + IPKSVTP RI EN ++FDFEL+ +D+ T+ S+NRN R L HKDYPF+
Sbjct: 255 QRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALLSCTSHKDYPFHE 314
Query: 772 EF 773
EF
Sbjct: 315 EF 316
Score = 411 bits (1058), Expect = e-139
Identities = 125/287 (43%), Positives = 181/287 (63%), Gaps = 17/287 (5%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
++S +V EAV AID+GYRH DCA+ YQNE ++G AIQ+K+ + V+ RE++FI +KLW
Sbjct: 21 WKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLW 80
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
T++ L++ Q++L L++DY++LYL+HWP F+ G + P G D +
Sbjct: 81 CTYH-EKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSD-TNI 138
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVA--RIKPVTNQARYLFLIEVHPYLT 182
+D W ME LVDEGL ++IG+SNFN Q+E +L + KP NQ IE HPYLT
Sbjct: 139 LDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQ------IECHPYLT 192
Query: 183 QKKMAAFCRDNDLVITAYSPLSNPTNPFRAK-VPFVLEDQTVKDIASRYDKTPAQI---- 237
Q+K+ +C+ +V+TAYSPL +P P+ P +LED +K IA++++KT AQ+
Sbjct: 193 QEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRF 252
Query: 238 --QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
Q + +PKSVT R+ EN +FDFELS +DM TL + N R C
Sbjct: 253 PMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVC 299
>2ao0_A Aldehyde dehydrogenase; TIM barrel, aldo-keto reductase, ternary
complex; HET: NAP FID; 1.85A {Sus scrofa} PDB: 3h4g_A*
3cv7_A* 3fx4_A* 1hqt_A* 1ae4_A* 1cwn_A* 2alr_A
Length = 324
Score = 551 bits (1422), Expect = 0.0
Identities = 160/365 (43%), Positives = 228/365 (62%), Gaps = 53/365 (14%)
Query: 419 PFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGDAIAQK 478
V + G K P+ GLGTWKS+ G+VK A+ YA+ +GYRHIDCA +Y NE E+G+A+ +
Sbjct: 3 SCVLLHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALQET 62
Query: 479 LKD-NVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKALQN 537
+ V RE+L++TSKLWNT H P+ V+PAL+KTL +L+L+YLDLYL+HWP A++
Sbjct: 63 VGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFE---- 118
Query: 538 LKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSDANY 597
GD FP +A+G Y +Y
Sbjct: 119 ---------------------------------------RGDNPFPKNADGTIRYDATHY 139
Query: 598 VDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHKLKQWC 657
DTW +E LVA GLV+++G+SNF+S+QI D+L +++P V QVECHPYL Q++L C
Sbjct: 140 KDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNELIAHC 199
Query: 658 EERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQQGNIC 717
+ R + +TAYSPLGS DR W P +P LL++P ++ +A KYN++ AQIL+++QVQ+ IC
Sbjct: 200 QARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEKYNRSPAQILLRWQVQRKVIC 259
Query: 718 IPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFL---------LLEWVKDHKDYP 768
IPKSVTPSRI +N Q+FDF +PE+++ +D+ N+N RF+ + H YP
Sbjct: 260 IPKSVTPSRILQNIQVFDFTFSPEEMKQLDALNKNLRFIVPMLTVDGKRVPRDAGHPLYP 319
Query: 769 FNIEF 773
FN +
Sbjct: 320 FNDPY 324
Score = 409 bits (1053), Expect = e-138
Identities = 116/286 (40%), Positives = 179/286 (62%), Gaps = 16/286 (5%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQG-VITREDIFITTKL 63
++S +V A+ +A+ +GYRH DCA Y NE +IGEA+Q+ + G + RE++F+T+KL
Sbjct: 21 WKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALQETVGPGKAVPREELFVTSKL 80
Query: 64 WITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVD 123
W T + P+ + L+++L LQ++Y++LYLMHWP+AF G + P ADG +D
Sbjct: 81 WNTKHH-PEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDA-TH 138
Query: 124 YVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQ 183
Y D WK +E LV +GL R++G+SNF+++Q++ +L VA ++P Q +E HPYL Q
Sbjct: 139 YKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQ------VECHPYLAQ 192
Query: 184 KKMAAFCRDNDLVITAYSPLSNPTNPFRAK-VPFVLEDQTVKDIASRYDKTPAQI----- 237
++ A C+ L +TAYSPL + +R P +LE+ V+ +A +Y+++PAQI
Sbjct: 193 NELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEKYNRSPAQILLRWQ 252
Query: 238 -QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
Q I +PKSVT SR+ +N +FDF S E+M LD L+ N R
Sbjct: 253 VQRKVICIPKSVTPSRILQNIQVFDFTFSPEEMKQLDALNKNLRFI 298
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic
tetrad, hepes, NADP, bIle catabolism, disease mutation,
lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens}
PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A*
3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Length = 326
Score = 548 bits (1414), Expect = 0.0
Identities = 151/367 (41%), Positives = 215/367 (58%), Gaps = 50/367 (13%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSK----KGEVKQAVGYAIDIGYRHIDCAHVYENED 469
++ + ++G PI GLGT+ KG +V AID GYRHID A++Y+NE
Sbjct: 3 LSAASHRIPLSDGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEH 62
Query: 470 EVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWP 529
EVG+AI +K+ + V+RED++ KLW T H P++V+P L++TL+ L+LDY+DLY+I P
Sbjct: 63 EVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVP 122
Query: 530 QAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGK 589
A+K GD ++P D NGK
Sbjct: 123 MAFK-------------------------------------------PGDEIYPRDENGK 139
Query: 590 TLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGT--IKPVVNQVECHPY 647
LY +N TW ME GLVKS+GVSNFN +Q++ IL+K KPV NQVECHPY
Sbjct: 140 WLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPY 199
Query: 648 LTQHKLKQWCEERQILITAYSPLGSPDRP-WAKPGDPSLLDDPKIKEIAAKYNKTSAQIL 706
TQ KL ++C++ I+ITAYSPLG+ P W P LL D + + +YNKT+AQI+
Sbjct: 200 FTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIV 259
Query: 707 IKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKD 766
+++ +Q+G + IPKS RI+EN QIFDF L E+++ I++ N+N RF+ L +DH +
Sbjct: 260 LRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFVELLMWRDHPE 319
Query: 767 YPFNIEF 773
YPF+ E+
Sbjct: 320 YPFHDEY 326
Score = 408 bits (1050), Expect = e-137
Identities = 119/282 (42%), Positives = 172/282 (60%), Gaps = 18/282 (6%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSS 70
+V AID GYRH D AY YQNE ++GEAI++KI++G + REDIF KLW T +
Sbjct: 36 ACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNH-V 94
Query: 71 PDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKT 130
P+++R L+ +L +LQ+DYV+LY++ P AF+ G ++ P +GK+ + + W+
Sbjct: 95 PEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHK-SNLCATWEA 153
Query: 131 MECLVDEGLARSIGVSNFNTKQLETLLGVA--RIKPVTNQARYLFLIEVHPYLTQKKMAA 188
ME D GL +S+GVSNFN +QLE +L + KPV+NQ +E HPY TQ K+
Sbjct: 154 MEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQ------VECHPYFTQPKLLK 207
Query: 189 FCRDNDLVITAYSPLSNPTNPFRAK--VPFVLEDQTVKDIASRYDKTPAQI------QLG 240
FC+ +D+VITAYSPL NP P +L+D + + RY+KT AQI Q G
Sbjct: 208 FCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRG 267
Query: 241 NITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
+ +PKS R++EN IFDF L++E+M ++ L+ N R
Sbjct: 268 VVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRFV 309
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase,
NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP:
c.1.7.1 PDB: 1lwi_A*
Length = 323
Score = 547 bits (1412), Expect = 0.0
Identities = 149/365 (40%), Positives = 208/365 (56%), Gaps = 49/365 (13%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTW---KSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDE 470
M V N+G P+ G GT K K EV +A AID G+RH D A++YE E+E
Sbjct: 1 MDSISLRVALNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEE 60
Query: 471 VGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQ 530
VG AI K++D VKRED++ TSKLW+TFHRP+LV+ L+KTL++ +LDY+DLY+IH+P
Sbjct: 61 VGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPM 120
Query: 531 AYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKT 590
A + GD FP D +GK
Sbjct: 121 ALQ-------------------------------------------PGDIFFPRDEHGKL 137
Query: 591 LYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGT--IKPVVNQVECHPYL 648
L+ + DTW MEK GL KSIGVSNFN +Q++ IL+K KPV NQVECH YL
Sbjct: 138 LFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYL 197
Query: 649 TQHKLKQWCEERQILITAYSPLGSP-DRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILI 707
Q K+ +C+ + I++ +Y LGS D+ W P LLDDP + IA KY +T A + +
Sbjct: 198 NQSKMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVLLDDPVLCAIAKKYKQTPALVAL 257
Query: 708 KYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKDY 767
+YQ+Q+G + + +S RI+E Q+F+F+LA ED++ +D NRN R+ ++ DH ++
Sbjct: 258 RYQLQRGVVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFRYNNAKYFDDHPNH 317
Query: 768 PFNIE 772
PF E
Sbjct: 318 PFTDE 322
Score = 411 bits (1060), Expect = e-139
Identities = 116/291 (39%), Positives = 171/291 (58%), Gaps = 18/291 (6%)
Query: 2 YIMFQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITT 61
+ + + EV +A AID G+RHFD AY Y+ E ++G+AI+ KI G + REDIF T+
Sbjct: 24 TVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTS 83
Query: 62 KLWITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDS 121
KLW TF+ P+L+R CL+++L Q+DYV+LY++H+P A + G P GK F+
Sbjct: 84 KLWSTFH-RPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFET- 141
Query: 122 VDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVA--RIKPVTNQARYLFLIEVHP 179
VD D W+ ME D GLA+SIGVSNFN +QLE +L + KPV NQ +E H
Sbjct: 142 VDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQ------VECHL 195
Query: 180 YLTQKKMAAFCRDNDLVITAYSPLSNPTNPFRAK--VPFVLEDQTVKDIASRYDKTPAQI 237
YL Q KM +C+ D+++ +Y L + + P +L+D + IA +Y +TPA +
Sbjct: 196 YLNQSKMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVLLDDPVLCAIAKKYKQTPALV 255
Query: 238 ------QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
Q G + + +S R++E +F+F+L+ EDM LDGL+ N R
Sbjct: 256 ALRYQLQRGVVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFRYN 306
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase;
HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB:
1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A*
3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A*
1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Length = 331
Score = 546 bits (1409), Expect = 0.0
Identities = 142/366 (38%), Positives = 204/366 (55%), Gaps = 49/366 (13%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKK---GEVKQAVGYAIDIGYRHIDCAHVYENEDE 470
M V N+G P+ G GT+ + + + AI+ G+RHID AH+Y NE++
Sbjct: 1 MDSKQQCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQ 60
Query: 471 VGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQ 530
VG AI K+ D VKRED++ TSKLW+TFHRP+LV+PAL+ +L+ +LDY+DLYLIH P
Sbjct: 61 VGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPM 120
Query: 531 AYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKT 590
+ K G+ L P D NGK
Sbjct: 121 SLK-------------------------------------------PGEELSPTDENGKV 137
Query: 591 LYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGT--IKPVVNQVECHPYL 648
++ + TW MEK GL KSIGVSNFN +Q++ IL+K KPV NQVECHPY
Sbjct: 138 IFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYF 197
Query: 649 TQHKLKQWCEERQILITAYSPLGSP-DRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILI 707
+ KL +C+ + I++ AYS LGS D+ W P P LL+DP + +A K+ +T A I +
Sbjct: 198 NRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIAL 257
Query: 708 KYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKDY 767
+YQ+Q+G + + KS RI +N Q+F+F+L ED++ ID +RN + + H +Y
Sbjct: 258 RYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYFNSDSFASHPNY 317
Query: 768 PFNIEF 773
P++ E+
Sbjct: 318 PYSDEY 323
Score = 407 bits (1049), Expect = e-137
Identities = 116/282 (41%), Positives = 165/282 (58%), Gaps = 18/282 (6%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSS 70
+ E AI+ G+RH D A+ Y NE Q+G AI+ KI+ G + REDIF T+KLW TF+
Sbjct: 33 KALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFH-R 91
Query: 71 PDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKT 130
P+L+R L+ SL Q+DYV+LYL+H P + + G +L P +GK FD VD W+
Sbjct: 92 PELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDI-VDLCTTWEA 150
Query: 131 MECLVDEGLARSIGVSNFNTKQLETLLGVA--RIKPVTNQARYLFLIEVHPYLTQKKMAA 188
ME D GLA+SIGVSNFN +QLE +L + KPV NQ +E HPY + K+
Sbjct: 151 MEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQ------VECHPYFNRSKLLD 204
Query: 189 FCRDNDLVITAYSPLSNPTNPFRAK--VPFVLEDQTVKDIASRYDKTPAQI------QLG 240
FC+ D+V+ AYS L + + P +LED + +A ++ +TPA I Q G
Sbjct: 205 FCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRG 264
Query: 241 NITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
+ + KS + R+ +N +F+F+L+ EDM +DGLD N
Sbjct: 265 VVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYF 306
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel,
dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis}
SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A*
1sm9_A* 1r38_A* 1z9a_A*
Length = 322
Score = 530 bits (1367), Expect = 0.0
Identities = 126/362 (34%), Positives = 178/362 (49%), Gaps = 49/362 (13%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGD 473
M+ + P + ++G P G G WK + V AI GYR D A Y NE EVGD
Sbjct: 1 MSASIPDIKLSSGHLMPSIGFGCWKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGD 60
Query: 474 AIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYK 533
+ + + + +VKRE++++TSKLWN +H P V+ AL KTL +LK+DY+DL+LIH+P A+K
Sbjct: 61 GVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFK 120
Query: 534 ALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFP----ADANGK 589
+ + +P
Sbjct: 121 -----------------------------------------FVPIEEKYPPGFYCGDGNN 139
Query: 590 TLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLT 649
+Y D ++TW +EKLVA G +KSIGVSNF + D+L TIKP V QVE HPYL
Sbjct: 140 FVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQ 199
Query: 650 QHKLKQWCEERQILITAYSPLGSPDRPWAKPG----DPSLLDDPKIKEIAAKYNKTSAQI 705
Q KL ++ ++ + ITAYS G G P+L IK IAAKYNKT A++
Sbjct: 200 QPKLIEFAQKAGVTITAYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEV 259
Query: 706 LIKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHK 765
L+++ Q+G IPKS P R+ +N F+L ED + I + RF +
Sbjct: 260 LLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIGLRFNDPWDWDNIP 319
Query: 766 DY 767
+
Sbjct: 320 IF 321
Score = 402 bits (1035), Expect = e-135
Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 23/294 (7%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
++ E V AI GYR FD A Y NE ++G+ ++ I +G++ RE+IF+T+KLW
Sbjct: 24 WKLANATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLW 83
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPF-----KADGKFDFD 119
++ P + L ++L L++DYV+L+L+H+P AF+ + DG
Sbjct: 84 NNYH-DPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVY 142
Query: 120 DSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHP 179
+ V ++ WK +E LV G +SIGVSNF L LL A IKP Q +E HP
Sbjct: 143 EDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQ------VEHHP 196
Query: 180 YLTQKKMAAFCRDNDLVITAYSPLSNPTNPF-----RAKVPFVLEDQTVKDIASRYDKTP 234
YL Q K+ F + + ITAYS + P + T+K IA++Y+KTP
Sbjct: 197 YLQQPKLIEFAQKAGVTITAYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTP 256
Query: 235 AQI------QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
A++ Q G +PKS RL +NR F+L++ED + + LD R
Sbjct: 257 AEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIGLRFN 310
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance,
oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Length = 335
Score = 524 bits (1352), Expect = 0.0
Identities = 124/360 (34%), Positives = 182/360 (50%), Gaps = 52/360 (14%)
Query: 410 QATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENED 469
+ + MA F N G KFP GLGTW++ G V AV A+ IGYRHIDCA +Y NE
Sbjct: 17 RGSHMANAITFFKLNTGAKFPSVGLGTWQASPGLVGDAVAAAVKIGYRHIDCAQIYGNEK 76
Query: 470 EVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWP 529
E+G + + +D VVKREDL+ITSKLW T H P V AL +TL++L+L+Y+DLYLIHWP
Sbjct: 77 EIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWP 136
Query: 530 QAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGK 589
K +G +
Sbjct: 137 ARIK-------------------------------------------KGSVGIKPEN--- 150
Query: 590 TLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLT 649
+ TW ME L G ++IGVSNF++K++ D+L+ + P VNQVECHP
Sbjct: 151 --LLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWR 208
Query: 650 QHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKY 709
Q KL+++C+ + + ++AYSPLGSP W +L +P + +A K K+ AQ+ +++
Sbjct: 209 QTKLQEFCKSKGVHLSAYSPLGSPGTTW---LKSDVLKNPILNMVAEKLGKSPAQVALRW 265
Query: 710 QVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKDYPF 769
+Q G+ +PKS RI+EN +FD+ + + R + ++ P+
Sbjct: 266 GLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQA-RLVTGSFLVHETLSPY 324
Score = 397 bits (1022), Expect = e-133
Identities = 100/285 (35%), Positives = 154/285 (54%), Gaps = 22/285 (7%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
+Q+ V +AV A+ +GYRH DCA Y NE +IG ++ V+ RED+FIT+KLW
Sbjct: 44 WQASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLW 103
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
T + P + + L +L LQ++YV+LYL+HWP + G + + VD
Sbjct: 104 CTDH-DPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIK-----PENLLP-VDI 156
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
WK ME L D G AR+IGVSNF+TK+L LL +AR+ P NQ +E HP Q
Sbjct: 157 PSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQ------VECHPSWRQT 210
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------Q 238
K+ FC+ + ++AYSPL +P + VL++ + +A + K+PAQ+ Q
Sbjct: 211 KLQEFCKSKGVHLSAYSPLGSPGTTWLK--SDVLKNPILNMVAEKLGKSPAQVALRWGLQ 268
Query: 239 LGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCC 283
+G+ +PKS + R++EN ++FD+ + ++ R
Sbjct: 269 MGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIE-QARLVT 312
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961;
structural genomics, PSI, protein structure initiative;
1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Length = 317
Score = 522 bits (1347), Expect = 0.0
Identities = 115/368 (31%), Positives = 180/368 (48%), Gaps = 62/368 (16%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGD 473
M+ + +NG++ P+ GLGTW+S EV AV A+ GYR ID A VY+NE+ +G
Sbjct: 1 MSSATASIKLSNGVEMPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGT 60
Query: 474 AIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYK 533
AI + L++ VVKRE+L+IT+K W P ++ L+++L+ L+L+Y+DLYL H P
Sbjct: 61 AIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAHMP---- 116
Query: 534 ALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYS 593
AF + + +
Sbjct: 117 ----------------------------------AAFN---------------DDMSEHI 127
Query: 594 DANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHKL 653
+ D W + + + GL K++GVSN+N+ QI L G +QVE H Y QH
Sbjct: 128 ASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDH 187
Query: 654 KQWCEERQILITAYSPLGSPDR---------PWAKPGDPSLLDDPKIKEIAAKYNKTSAQ 704
+C++ I +T+Y+ LGSP R PS L D + +A K +KT AQ
Sbjct: 188 VDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPAPSDLQDQNVLALAEKTHKTPAQ 247
Query: 705 ILIKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDH 764
+L++Y + +G +PKS+ +RI+EN ++FDF L EDI ++ + R L +++ H
Sbjct: 248 VLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLFLQDFMTGH 307
Query: 765 KDYPFNIE 772
+ F E
Sbjct: 308 PEDAFAAE 315
Score = 395 bits (1017), Expect = e-132
Identities = 98/294 (33%), Positives = 151/294 (51%), Gaps = 34/294 (11%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
+QS EV AV A+ GYR D A YQNE IG AI++ + +GV+ RE++FITTK W
Sbjct: 24 WQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTKAW 83
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
+P + L+ESL LQ++YV+LYL H P AF D +
Sbjct: 84 THEL-APGKLEGGLRESLKKLQLEYVDLYLAHMPAAFN----------DDMSEHIA-SPV 131
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
DVW+ + + GLA+++GVSN+N Q+ L + +Q +E+H Y Q
Sbjct: 132 EDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQ------VELHLYFPQH 185
Query: 185 KMAAFCRDNDLVITAYSPLSNP----------TNPFRAKVPFVLEDQTVKDIASRYDKTP 234
FC+ +++ +T+Y+ L +P A P L+DQ V +A + KTP
Sbjct: 186 DHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPAPSDLQDQNVLALAEKTHKTP 245
Query: 235 AQI------QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
AQ+ G +PKS+ ++R++EN ++FDF L++ED+ L+ + R
Sbjct: 246 AQVLLRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQRLF 299
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance,
oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Length = 331
Score = 507 bits (1308), Expect = e-176
Identities = 121/365 (33%), Positives = 183/365 (50%), Gaps = 56/365 (15%)
Query: 410 QATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENED 469
+ + MA F N G K P GLGT+ V A+ AI IGYRHIDCA +Y NE
Sbjct: 17 RGSHMAAPIRFFELNTGAKLPCVGLGTYA----MVATAIEQAIKIGYRHIDCASIYGNEK 72
Query: 470 EVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWP 529
E+G + + + D VKRE+L+ITSKLW+ H P+ V AL+KTLQ+L++DY+DLYLIHWP
Sbjct: 73 EIGGVLKKLIGDGFVKREELFITSKLWSNDHLPEDVPKALEKTLQDLQIDYVDLYLIHWP 132
Query: 530 QAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGK 589
+ K ++L P
Sbjct: 133 ASLKK--------------------------------------------ESLMPTPEM-- 146
Query: 590 TLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLT 649
+ + TW ME L G ++IGVSNF+SK++ D+L+ + P VNQVECHP
Sbjct: 147 --LTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQ 204
Query: 650 QHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKY 709
Q L + C+ + + ++ YSPLGS + +L +P + E+A K KT+AQ+ +++
Sbjct: 205 QQGLHELCKSKGVHLSGYSPLGSQSKGE---VRLKVLQNPIVTEVAEKLGKTTAQVALRW 261
Query: 710 QVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKD-HKDYP 768
+Q G+ +PKS + +R++EN +FD+ + + + + E+ + H Y
Sbjct: 262 GLQTGHSVLPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQEKFCRATEFAHETHGFYK 321
Query: 769 FNIEF 773
E
Sbjct: 322 TIEEL 326
Score = 391 bits (1008), Expect = e-131
Identities = 100/289 (34%), Positives = 152/289 (52%), Gaps = 23/289 (7%)
Query: 10 REVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYS 69
V A+ AI +GYRH DCA Y NE +IG ++ I G + RE++FIT+KLW +
Sbjct: 45 AMVATAIEQAIKIGYRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWSNDH- 103
Query: 70 SPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWK 129
P+ + K L+++L LQ+DYV+LYL+HWP + + L+P D WK
Sbjct: 104 LPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKK-ESLMPTPEM-----LTKPDITSTWK 157
Query: 130 TMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKKMAAF 189
ME L D G AR+IGVSNF++K+L LL VAR+ P NQ +E HP Q+ +
Sbjct: 158 AMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQ------VECHPVWQQQGLHEL 211
Query: 190 CRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------QLGNIT 243
C+ + ++ YSPL + + VL++ V ++A + KT AQ+ Q G+
Sbjct: 212 CKSKGVHLSGYSPLGSQSKGE--VRLKVLQNPIVTEVAEKLGKTTAQVALRWGLQTGHSV 269
Query: 244 VPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCCVPGRMVENT 292
+PKS + +RL+EN D+FD+ + ++ + C T
Sbjct: 270 LPKSSSGARLKENLDVFDWSIPEDLFTKFSNIPQEKF--CRATEFAHET 316
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university
of washingto niaid, oxidoreductase, S genomics; HET:
NAP; 1.75A {Giardia lamblia}
Length = 334
Score = 507 bits (1307), Expect = e-176
Identities = 118/359 (32%), Positives = 178/359 (49%), Gaps = 54/359 (15%)
Query: 406 FQPMQATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVY 465
M + + P G GTW++ V+ AV A+ GYRHIDCA+VY
Sbjct: 6 HHHMGTLEA----QTQGPGSMQYPPRLGFGTWQAPPEAVQTAVETALMTGYRHIDCAYVY 61
Query: 466 ENEDEVGDAIAQKLKDN--VVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDL 523
+NE+ +G A + KD +KRED++ITSKLWN HRP+LV+ +KT+ +L++DYLDL
Sbjct: 62 QNEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNHRPELVREQCKKTMSDLQVDYLDL 121
Query: 524 YLIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFP 583
+L+HWP A+ + LFP
Sbjct: 122 FLVHWPLAFV-----------------------------------------RNDVGDLFP 140
Query: 584 ADANGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVE 643
DA G+ + DTW ME+LV +GLVK IGVSN+ + D+L+ IKP+VNQ+E
Sbjct: 141 KDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIE 200
Query: 644 CHPYLTQHKLKQWCEERQILITAYSPLGSPDRPWAKP---GDPSLLDDPKIKEIAAKYNK 700
HP+ ++C + I +TAYSP+G P +L+ +K IA
Sbjct: 201 IHPWHPNDATVKFCLDNGIGVTAYSPMGGSYADPRDPSGTQKNVILECKTLKAIADAKGT 260
Query: 701 TSAQILIKYQVQQGN----ICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
+ + + + V++ N IPKS TP+RIE N + + +L+ +D+ I++ + N R
Sbjct: 261 SPHCVALAWHVKKWNTSMYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNIHLNKRI 319
Score = 392 bits (1010), Expect = e-131
Identities = 111/301 (36%), Positives = 160/301 (53%), Gaps = 27/301 (8%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQG--VITREDIFITTK 62
+Q+ V AV A+ GYRH DCAY YQNE IG A I RED++IT+K
Sbjct: 33 WQAPPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKREDVWITSK 92
Query: 63 LWITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSG--GDLVPFKADGKFDFDD 120
LW + P+L+R+ ++++ LQ+DY++L+L+HWP AF GDL P A+G+ +
Sbjct: 93 LWNYNHR-PELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEK 151
Query: 121 SVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPY 180
V D W+ ME LV+EGL + IGVSN+ L LL A+IKP+ NQ IE+HP+
Sbjct: 152 -VPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQ------IEIHPW 204
Query: 181 LTQKKMAAFCRDNDLVITAYSPLSNPTNPFRAKV----PFVLEDQTVKDIASRYDKTPAQ 236
FC DN + +TAYSP+ R +LE +T+K IA +P
Sbjct: 205 HPNDATVKFCLDNGIGVTAYSPMGGSYADPRDPSGTQKNVILECKTLKAIADAKGTSPHC 264
Query: 237 I------QLGNIT----VPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC-CVP 285
+ + N + +PKS T +R+E N + +LS +DMD ++ + N R C P
Sbjct: 265 VALAWHVKKWNTSMYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNIHLNKRIRFCDP 324
Query: 286 G 286
Sbjct: 325 A 325
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase;
HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Length = 344
Score = 503 bits (1297), Expect = e-174
Identities = 115/368 (31%), Positives = 168/368 (45%), Gaps = 58/368 (15%)
Query: 404 NSFQPMQATKMAINF-PFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCA 462
+ + M +G P GLGTW++ + GYRH+D A
Sbjct: 22 HMLEASAKATMGQGEQDHFVLKSGHAMPAVGLGTWRAGSDTAHSVRTAITEAGYRHVDTA 81
Query: 463 HVYENEDEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLD 522
Y E EVG + ++ + R+DL++TSK+W T P+ V+PAL+ TL++L+LDY+D
Sbjct: 82 AEYGVEKEVGKGLKAAMEAGI-DRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYID 140
Query: 523 LYLIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLF 582
LY IHWP K +G +
Sbjct: 141 LYHIHWPFRLK-------------------------------------------DGAHMP 157
Query: 583 PADANGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQV 642
P + + W EME LV DGLVK IGV N+ ++ +L I P V Q+
Sbjct: 158 PEAGE----VLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQM 213
Query: 643 ECHPYLTQHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTS 702
E HP K+ + C++ I ITAYSPLGS ++ L DP ++++A K NKT
Sbjct: 214 EMHPGWKNDKIFEACKKHGIHITAYSPLGSSEKN--------LAHDPVVEKVANKLNKTP 265
Query: 703 AQILIKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFL-LLEWV 761
Q+LIK+ +Q+G IPKS RI+EN Q+F +E+ ED + + S R L E
Sbjct: 266 GQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEELF 325
Query: 762 KDHKDYPF 769
+ P+
Sbjct: 326 VNKTHGPY 333
Score = 394 bits (1014), Expect = e-132
Identities = 86/284 (30%), Positives = 142/284 (50%), Gaps = 26/284 (9%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
+++ + + GYRH D A Y E ++G+ ++ + G+ R+D+F+T+K+W
Sbjct: 56 WRAGSDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGI-DRKDLFVTSKIW 114
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
T + P+ +R L+ +L LQ+DY++LY +HWP + G + P + D
Sbjct: 115 CTNLA-PERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGE-----VLEFDM 168
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
VWK ME LV +GL + IGV N+ +L LL A+I P Q +E+HP
Sbjct: 169 EGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQ------MEMHPGWKND 222
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------Q 238
K+ C+ + + ITAYSPL + + D V+ +A++ +KTP Q+ Q
Sbjct: 223 KIFEACKKHGIHITAYSPLGSSEKN-------LAHDPVVEKVANKLNKTPGQVLIKWALQ 275
Query: 239 LGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
G +PKS R++EN +F +E+ +ED L + R
Sbjct: 276 RGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVL 319
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid,
biosynthesis, plant protein; HET: NAP; 1.70A {Medicago
sativa}
Length = 312
Score = 497 bits (1283), Expect = e-173
Identities = 112/349 (32%), Positives = 177/349 (50%), Gaps = 53/349 (15%)
Query: 409 MQATKMAINFPFVTFNNGLKFPIFGLGTWK--SKKGEVKQAVGYAIDIGYRHIDCAHVYE 466
M + ++ ++ LK P+ G+G+ + K + K A+ AI GYRH D A Y
Sbjct: 1 MGSVEIP-TKVLTNTSSQLKMPVVGMGSAPDFTCKKDTKDAIIEAIKQGYRHFDTAAAYG 59
Query: 467 NEDEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLI 526
+E +G+A+ + ++ +V R+DL++TSKLW T + P LV PALQK+L+ L+LDYLDLYLI
Sbjct: 60 SEQALGEALKEAIELGLVTRDDLFVTSKLWVTENHPHLVIPALQKSLKTLQLDYLDLYLI 119
Query: 527 HWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADA 586
HWP + + G FP D
Sbjct: 120 HWPLSSQ-------------------------------------------PGKFSFPIDV 136
Query: 587 NGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHP 646
+ W ME+ + GL K+IGVSNF+ K+++++L T+ P VNQVE +
Sbjct: 137 ADLL---PFDVKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNL 193
Query: 647 YLTQHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQIL 706
Q KL+++C I++TA+SP+ A G ++++ +KEIA + K+ AQI
Sbjct: 194 AWQQKKLREFCNAHGIVLTAFSPVR----KGASRGPNEVMENDMLKEIADAHGKSVAQIS 249
Query: 707 IKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
+++ +QG +PKS R+ +N +IFD+ L ED + I +N
Sbjct: 250 LRWLYEQGVTFVPKSYDKERMNQNLRIFDWSLTKEDHEKIAQIKQNRLI 298
Score = 403 bits (1037), Expect = e-136
Identities = 102/278 (36%), Positives = 158/278 (56%), Gaps = 20/278 (7%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSS 70
+ +A+ AI GYRHFD A Y +E +GEA+++ I G++TR+D+F+T+KLW+T
Sbjct: 36 DTKDAIIEAIKQGYRHFDTAAAYGSEQALGEALKEAIELGLVTRDDLFVTSKLWVTEN-H 94
Query: 71 PDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKT 130
P L+ LQ+SL LQ+DY++LYL+HWP + + G P D VW++
Sbjct: 95 PHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLP----FDVKGVWES 150
Query: 131 MECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKKMAAFC 190
ME + GL ++IGVSNF+ K+LE LL VA + P NQ +E++ QKK+ FC
Sbjct: 151 MEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQ------VEMNLAWQQKKLREFC 204
Query: 191 RDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------QLGNITV 244
+ +V+TA+SP+ + V+E+ +K+IA + K+ AQI + G V
Sbjct: 205 NAHGIVLTAFSPVRKGASR---GPNEVMENDMLKEIADAHGKSVAQISLRWLYEQGVTFV 261
Query: 245 PKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
PKS K R+ +N IFD+ L++ED + + + N
Sbjct: 262 PKSYDKERMNQNLRIFDWSLTKEDHEKIAQIKQNRLIP 299
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics,
joint center for structural genomics, JCSG, protein
structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A
{Mus musculus}
Length = 324
Score = 410 bits (1055), Expect = e-138
Identities = 129/366 (35%), Positives = 193/366 (52%), Gaps = 49/366 (13%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKGE---VKQAVGYAIDIGYRHIDCAHVYENEDE 470
M+ V N+G P G GT+ + +A A+D+GYRH+D A+ Y+ E+E
Sbjct: 2 MSSXQHCVXLNDGHLIPALGFGTYXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQVEEE 61
Query: 471 VGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQ 530
+G AI + VV REDL++T+KLW T RP+LV PAL+ +L L+LDY+DLY++H+P
Sbjct: 62 IGQAIQSXIXAGVVXREDLFVTTKLWCTCFRPELVXPALEXSLXXLQLDYVDLYIMHYPV 121
Query: 531 AYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKT 590
GD FP + G +
Sbjct: 122 PMX-------------------------------------------SGDNDFPVNEQGXS 138
Query: 591 LYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIK--PVVNQVECHPYL 648
L ++ DTW +E+ GLV SIGVSNFN +Q++ IL+ + PV NQVECH YL
Sbjct: 139 LLDTVDFCDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYL 198
Query: 649 TQHKLKQWCEERQILITAYSPLGSPDR-PWAKPGDPSLLDDPKIKEIAAKYNKTSAQILI 707
Q L +CE I++ AY LG+ W P LL+DP + ++A ++ A I +
Sbjct: 199 NQRXLLDYCESXDIVLVAYGALGTQRYXEWVDQNSPVLLNDPVLCDVAXXNXRSPALIAL 258
Query: 708 KYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKDY 767
+Y +Q+G + + +S + + EN Q+F F+L+PED+ T+D N N R+L E++ DH +Y
Sbjct: 259 RYLIQRGIVPLAQSFXENEMRENLQVFGFQLSPEDMXTLDGLNXNFRYLPAEFLVDHPEY 318
Query: 768 PFNIEF 773
PF E+
Sbjct: 319 PFVEEY 324
Score = 311 bits (799), Expect = e-100
Identities = 115/281 (40%), Positives = 157/281 (55%), Gaps = 18/281 (6%)
Query: 12 VYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSSP 71
EA C A+D+GYRH D AY YQ E +IG+AIQ I GV+ RED+F+TTKLW T + P
Sbjct: 35 SLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSXIXAGVVXREDLFVTTKLWCTCF-RP 93
Query: 72 DLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKTM 131
+L+ L+ SL LQ+DYV+LY+MH+P SG + P G D VD+ D W+ +
Sbjct: 94 ELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDT-VDFCDTWERL 152
Query: 132 ECLVDEGLARSIGVSNFNTKQLETLLGVARI--KPVTNQARYLFLIEVHPYLTQKKMAAF 189
E D GL SIGVSNFN +QLE +L + PV NQ +E H YL Q+ + +
Sbjct: 153 EECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQ------VECHLYLNQRXLLDY 206
Query: 190 CRDNDLVITAYSPLSNPT--NPFRAKVPFVLEDQTVKDIASRYDKTPAQI------QLGN 241
C D+V+ AY L P +L D + D+A ++PA I Q G
Sbjct: 207 CESXDIVLVAYGALGTQRYXEWVDQNSPVLLNDPVLCDVAXXNXRSPALIALRYLIQRGI 266
Query: 242 ITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
+ + +S ++ + EN +F F+LS EDM TLDGL+ N R
Sbjct: 267 VPLAQSFXENEMRENLQVFGFQLSPEDMXTLDGLNXNFRYL 307
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics,
joint center for structural genomics, PSI, protein
structure initiative; HET: NAP; 2.40A {Thermotoga
maritima} SCOP: c.1.7.1
Length = 298
Score = 384 bits (988), Expect = e-128
Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 78/355 (21%)
Query: 419 PFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGDAIAQK 478
P VT NNG++ PI G G ++ + ++ V AI +GYR ID A Y NE+ VG AI +
Sbjct: 16 PKVTLNNGVEMPILGYGVFQIPPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRA 75
Query: 479 LKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKALQNL 538
+ + +V+RE+L++T+KLW + + K A +K+L+ L+L+Y+DLYLI
Sbjct: 76 IDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLI------------ 123
Query: 539 KLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSDANYV 598
H P +
Sbjct: 124 ----------HQPFG------------------------------------------DVH 131
Query: 599 DTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHKLKQWCE 658
W ME++ DGLV++IGVSNF ++ D++ I P VNQ+E HP+ + + ++
Sbjct: 132 CAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMR 191
Query: 659 ERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQQGNICI 718
I A+ P G ++ + ++ IA KY KT AQ+++++ Q+G + I
Sbjct: 192 NYNIQPEAWGPFAE--------GRKNIFQNGVLRSIAEKYGKTVAQVILRWLTQKGIVAI 243
Query: 719 PKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKDHKDYPFNIEF 773
PK+V R++EN IFDFEL ED++ I + + H+D P +++
Sbjct: 244 PKTVRRERMKENISIFDFELTQEDMEKIATLDEGQSAFF-----SHRD-PEVVKW 292
Score = 316 bits (811), Expect = e-102
Identities = 93/282 (32%), Positives = 145/282 (51%), Gaps = 42/282 (14%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
FQ + E V AI +GYR D A Y NE +G AI+ I +G++ RE++F+TTKLW
Sbjct: 34 FQIPPEKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLW 93
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
++ + +K ++SL LQ++Y++LYL+H P D
Sbjct: 94 VSDV-GYESTKKAFEKSLKKLQLEYIDLYLIHQPFG----------------------DV 130
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
WK ME + +GL R+IGVSNF +L L+ I P NQ IE+HP+ ++
Sbjct: 131 HCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQ------IEIHPFYQRQ 184
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------Q 238
+ F R+ ++ A+ P + + ++ ++ IA +Y KT AQ+ Q
Sbjct: 185 EEIEFMRNYNIQPEAWGPFAEGRKN-------IFQNGVLRSIAEKYGKTVAQVILRWLTQ 237
Query: 239 LGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGR 280
G + +PK+V + R++EN IFDFEL+QEDM+ + LD
Sbjct: 238 KGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQS 279
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural
genomics, niaid, national institute of allergy AN
infectious diseases; HET: CIT; 1.60A {Leishmania major}
Length = 288
Score = 379 bits (977), Expect = e-127
Identities = 125/343 (36%), Positives = 183/343 (53%), Gaps = 70/343 (20%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKGEV-KQAVGYAIDIGYRHIDCAHVYENEDEVG 472
++ VT +NG+K P FGLG W+S GEV + AV +A+ GYRHID A +Y+NE+ VG
Sbjct: 6 AGVDKAMVTLSNGVKMPQFGLGVWQSPAGEVTENAVKWALCAGYRHIDTAAIYKNEESVG 65
Query: 473 DAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAY 532
+ + + V RED++IT+KLWNT + A +++ Q L +DY+DLYLIH
Sbjct: 66 AGL----RASGVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIH----- 116
Query: 533 KALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLY 592
WP+ + +
Sbjct: 117 -----------------WPRGKDILSK--------------------------------- 126
Query: 593 SDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHK 652
Y+D+W E+L + V++IGVSNF+ ++D+L T+ P+VNQVE HP Q
Sbjct: 127 EGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQAD 186
Query: 653 LKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQ 712
L+ +C+ +QI + A+SPLG LL +P + I AKYNKT+AQ+++++ +Q
Sbjct: 187 LRAFCDAKQIKVEAWSPLGQGK----------LLSNPILSAIGAKYNKTAAQVILRWNIQ 236
Query: 713 QGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
+ I IPKSV RIEENA IFDFEL ED+ +ID+ N N R+
Sbjct: 237 KNLITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSRY 279
Score = 313 bits (805), Expect = e-101
Identities = 101/288 (35%), Positives = 144/288 (50%), Gaps = 40/288 (13%)
Query: 5 FQSLEREV-YEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKL 63
+QS EV AV A+ GYRH D A Y+NE +G ++ + RED+FITTKL
Sbjct: 29 WQSPAGEVTENAVKWALCAGYRHIDTAAIYKNEESVGAGLRA----SGVPREDVFITTKL 84
Query: 64 WITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVD 123
W T + +ES L +DY++LYL+HWP +
Sbjct: 85 WNTEQG-YESTLAAFEESRQKLGVDYIDLYLIHWP-------------RGKDILSKEGKK 130
Query: 124 YVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQ 183
Y+D W+ E L E R+IGVSNF+ LE +L + + P+ NQ +E+HP Q
Sbjct: 131 YLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQ------VELHPLNNQ 184
Query: 184 KKMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------ 237
+ AFC + + A+SPL +L + + I ++Y+KT AQ+
Sbjct: 185 ADLRAFCDAKQIKVEAWSPLGQGK---------LLSNPILSAIGAKYNKTAAQVILRWNI 235
Query: 238 QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCCVP 285
Q IT+PKSV + R+EEN DIFDFEL ED+ ++D L+ N R P
Sbjct: 236 QKNLITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNSRYGPDP 283
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national
institute of allergy AN infectious diseases; HET: NAP;
1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Length = 290
Score = 375 bits (966), Expect = e-125
Identities = 111/347 (31%), Positives = 175/347 (50%), Gaps = 75/347 (21%)
Query: 410 QATKMAINFPFVTFNNGLKFPIFGLGTWKSKKG-EVKQAVGYAIDIGYRHIDCAHVYENE 468
M N+ VT +N ++ P GLG W+++ G E AV +AI+ GYRHID A++Y NE
Sbjct: 5 HHHHMNCNYNCVTLHNSVRMPQLGLGVWRAQDGAETANAVRWAIEAGYRHIDTAYIYSNE 64
Query: 469 DEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHW 528
VG I +++ V RE++++T+K+WN+ + A +++ + L L+Y+DLYLI
Sbjct: 65 RGVGQGI----RESGVPREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLI-- 118
Query: 529 PQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANG 588
HWP K
Sbjct: 119 --------------------HWPGKKK--------------------------------- 125
Query: 589 KTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYL 648
+VDTW +EKL + V++IGVSNF + ++ I+P+VNQVE HP
Sbjct: 126 --------FVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLF 177
Query: 649 TQHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIK 708
Q L+++C++ I ITA+SPLG + +L + + EIA K+NK+ AQ++I+
Sbjct: 178 QQRTLREFCKQHNIAITAWSPLG-------SGEEAGILKNHVLGEIAKKHNKSPAQVVIR 230
Query: 709 YQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
+ +Q G + IPKS RI+EN ++DF+L E+++ ID N + R
Sbjct: 231 WDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRI 277
Score = 311 bits (799), Expect = e-100
Identities = 91/281 (32%), Positives = 152/281 (54%), Gaps = 44/281 (15%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSS 70
E AV AI+ GYRH D AY Y NE +G+ I++ + RE++++TTK+W +
Sbjct: 39 ETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRE----SGVPREEVWVTTKVWNSDQG- 93
Query: 71 PDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKT 130
+ + S +LL ++Y++LYL+HWP +VD WK
Sbjct: 94 YEKTLAAFERSRELLGLEYIDLYLIHWPGKK---------------------KFVDTWKA 132
Query: 131 MECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKKMAAFC 190
+E L +E R+IGVSNF L L +I+P+ NQ +E+HP Q+ + FC
Sbjct: 133 LEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQ------VELHPLFQQRTLREFC 186
Query: 191 RDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------QLGNITV 244
+ +++ ITA+SPL + +L++ + +IA +++K+PAQ+ Q G +T+
Sbjct: 187 KQHNIAITAWSPLG------SGEEAGILKNHVLGEIAKKHNKSPAQVVIRWDIQHGIVTI 240
Query: 245 PKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCCVP 285
PKS K R++EN +++DF+L++E+M +D L+ + R P
Sbjct: 241 PKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIGADP 281
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT;
2.10A {Trypanosoma brucei}
Length = 281
Score = 372 bits (957), Expect = e-124
Identities = 121/343 (35%), Positives = 176/343 (51%), Gaps = 79/343 (23%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKG-EVKQAVGYAIDIGYRHIDCAHVYENEDEVG 472
MA+ + +NG+ P+ G G WK + G E + A +AI GYRHID A +Y+NE+ G
Sbjct: 6 MALT-QSLKLSNGVMMPVLGFGMWKLQDGNEAETATMWAIKSGYRHIDTAAIYKNEESAG 64
Query: 473 DAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAY 532
AI V RE+L++T+KLWN+ + A +K+++ L L+Y+DLYLI
Sbjct: 65 RAI----ASCGVPREELFVTTKLWNSDQGYESTLSAFEKSIKKLGLEYVDLYLI------ 114
Query: 533 KALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLY 592
HWP K
Sbjct: 115 ----------------HWPGKDK------------------------------------- 121
Query: 593 SDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHK 652
++DTW EKL AD V++IGVSNF+ I+++L + P+VNQ+E HP L Q
Sbjct: 122 ----FIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQKA 177
Query: 653 LKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQ 712
L ++C+ + I +TA+SPLG L++D ++K I KY KT+AQ+++++++Q
Sbjct: 178 LCEYCKSKNIAVTAWSPLGQ----------GHLVEDARLKAIGGKYGKTAAQVMLRWEIQ 227
Query: 713 QGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
G I IPKS +RI+EN IFDFEL EDIQ ID N HR+
Sbjct: 228 AGVITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHRY 270
Score = 309 bits (794), Expect = e-100
Identities = 99/281 (35%), Positives = 146/281 (51%), Gaps = 47/281 (16%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSS 70
E A AI GYRH D A Y+NE G AI + RE++F+TTKLW +
Sbjct: 35 EAETATMWAIKSGYRHIDTAAIYKNEESAGRAIAS----CGVPREELFVTTKLWNSDQG- 89
Query: 71 PDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKT 130
+ ++S+ L ++YV+LYL+HWP G D ++D WK
Sbjct: 90 YESTLSAFEKSIKKLGLEYVDLYLIHWP-----GKD----------------KFIDTWKA 128
Query: 131 MECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKKMAAFC 190
E L + R+IGVSNF+ +E LL ++ P+ NQ IE+HP L QK + +C
Sbjct: 129 FEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQ------IELHPLLNQKALCEYC 182
Query: 191 RDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------QLGNITV 244
+ ++ +TA+SPL ++ED +K I +Y KT AQ+ Q G IT+
Sbjct: 183 KSKNIAVTAWSPLGQGH---------LVEDARLKAIGGKYGKTAAQVMLRWEIQAGVITI 233
Query: 245 PKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCCVP 285
PKS ++R++EN +IFDFEL+ ED+ +DG++A R P
Sbjct: 234 PKSGNEARIKENGNIFDFELTAEDIQVIDGMNAGHRYGPDP 274
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus
subtilis} PDB: 3b3d_A
Length = 310
Score = 362 bits (931), Expect = e-120
Identities = 127/351 (36%), Positives = 182/351 (51%), Gaps = 79/351 (22%)
Query: 407 QPMQATKMAINF-PFVTFNNGLKFPIFGLGTWKSKKG-EVKQAVGYAIDIGYRHIDCAHV 464
Q M M + V +NG++ P FGLG +K + G E ++V AI GYR ID A +
Sbjct: 28 QQMGRGSMPTSLKDTVKLHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAI 87
Query: 465 YENEDEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLY 524
Y+NE+ VG I K++ V RE+L+ITSK+WN + A +K+L+ L+LDYLDLY
Sbjct: 88 YKNEEGVGIGI----KESGVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLY 143
Query: 525 LIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPA 584
LI HWP
Sbjct: 144 LI----------------------HWP--------------------------------- 148
Query: 585 DANGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVEC 644
K Y DTW +EKL DG +++IGVSNF ++++L IKP+VNQVE
Sbjct: 149 -GKDK-------YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEF 200
Query: 645 HPYLTQHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQ 704
HP LTQ +L+ +C+ + I + A+SPL G LLD+ + +IA K+NK+ AQ
Sbjct: 201 HPRLTQKELRDYCKGQGIQLEAWSPLMQ--------GQ--LLDNEVLTQIAEKHNKSVAQ 250
Query: 705 ILIKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
+++++ +Q G + IPKS+ RI ENA IFDFEL+ ED+ ID+ N++ R
Sbjct: 251 VILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 301
Score = 301 bits (774), Expect = 1e-96
Identities = 104/281 (37%), Positives = 155/281 (55%), Gaps = 47/281 (16%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSS 70
E E+V AI GYR D A Y+NE +G I++ G + RE++FIT+K+W
Sbjct: 66 EATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKE---SG-VAREELFITSKVWNEDQG- 120
Query: 71 PDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKT 130
+ ++SL+ LQ+DY++LYL+HWP G D Y D W+
Sbjct: 121 YETTLAAFEKSLERLQLDYLDLYLIHWP-----GKD----------------KYKDTWRA 159
Query: 131 MECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKKMAAFC 190
+E L +G R+IGVSNF LE LL A IKP+ NQ +E HP LTQK++ +C
Sbjct: 160 LEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQ------VEFHPRLTQKELRDYC 213
Query: 191 RDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------QLGNITV 244
+ + + A+SPL + ++ L+++ + IA +++K+ AQ+ Q G +T+
Sbjct: 214 KGQGIQLEAWSPLM------QGQL---LDNEVLTQIAEKHNKSVAQVILRWDLQHGVVTI 264
Query: 245 PKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCCVP 285
PKS+ + R+ EN DIFDFELSQEDMD +D L+ + R P
Sbjct: 265 PKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERVGPNP 305
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel,
aldo-ketoreductase, NADPH dependant, BACT targets at
IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP:
c.1.7.1
Length = 296
Score = 361 bits (929), Expect = e-120
Identities = 110/356 (30%), Positives = 167/356 (46%), Gaps = 76/356 (21%)
Query: 400 FIFTNSFQPMQATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHI 459
S + +A + +G P GLG W++ EV A+ A+++GYR I
Sbjct: 8 HHHLESTSLYKKAGLANP-TVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSI 66
Query: 460 DCAHVYENEDEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLD 519
D A Y+NE+ VG A+ K+ V RE+L+IT+KLWN H + AL +L+ L+LD
Sbjct: 67 DTAAAYKNEEGVGKAL----KNASVNREELFITTKLWNDDH--KRPREALLDSLKKLQLD 120
Query: 520 YLDLYLIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGD 579
Y+DLYL+ HWP
Sbjct: 121 YIDLYLM----------------------HWPVP-------------------------- 132
Query: 580 TLFPADANGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVV 639
+ +YV+ W M +L +GL+KSIGV NF +Q ++D+ + PV+
Sbjct: 133 -------------AIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVI 179
Query: 640 NQVECHPYLTQHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYN 699
NQ+E HP + Q +L W +I ++SPL G + D I+++A KY
Sbjct: 180 NQIELHPLMQQRQLHAWNATHKIQTESWSPLAQ--------GGKGVFDQKVIRDLADKYG 231
Query: 700 KTSAQILIKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
KT AQI+I++ + G + IPKSVTPSRI EN ++DF L +++ I ++ R
Sbjct: 232 KTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRL 287
Score = 305 bits (784), Expect = 2e-98
Identities = 96/284 (33%), Positives = 149/284 (52%), Gaps = 45/284 (15%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
+Q+ EV A+ A+++GYR D A Y+NE +G+A+++ + RE++FITTKLW
Sbjct: 44 WQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKN----ASVNREELFITTKLW 99
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
+ R+ L +SL LQ+DY++LYLMHWP Y
Sbjct: 100 NDDH---KRPREALLDSLKKLQLDYIDLYLMHWPVPAID-------------------HY 137
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
V+ WK M L EGL +SIGV NF L+ L+ + PV NQ IE+HP + Q+
Sbjct: 138 VEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ------IELHPLMQQR 191
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------Q 238
++ A+ + + ++SPL+ V + + ++D+A +Y KTPAQI
Sbjct: 192 QLHAWNATHKIQTESWSPLAQGGKG-------VFDQKVIRDLADKYGKTPAQIVIRWHLD 244
Query: 239 LGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTC 282
G + +PKSVT SR+ EN D++DF L ++++ + LD R
Sbjct: 245 SGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLG 288
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM
barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP:
c.1.7.1 PDB: 1a80_A* 1m9h_A*
Length = 278
Score = 356 bits (916), Expect = e-118
Identities = 102/341 (29%), Positives = 153/341 (44%), Gaps = 75/341 (21%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGD 473
M + P + N+G P G G +K + ++AV A+++GYRHID A +Y NE+ VG
Sbjct: 1 MTV--PSIVLNDGNSIPQLGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGA 58
Query: 474 AIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYK 533
AI + + R+DL+IT+KLWN H D A+ ++L L LD +DLYL+
Sbjct: 59 AI----AASGIARDDLFITTKLWNDRHDGDEPAAAIAESLAKLALDQVDLYLV------- 107
Query: 534 ALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYS 593
HWP +
Sbjct: 108 ---------------HWP---------------------------------------TPA 113
Query: 594 DANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHKL 653
NYV W +M +L A GL +SIGVSN ++ I+ + P VNQ+E HP Q ++
Sbjct: 114 ADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREI 173
Query: 654 KQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQQ 713
W + I ++ PLG G L + AA + KT AQ ++++ +Q+
Sbjct: 174 TDWAAAHDVKIESWGPLGQ--------GKYDLFGAEPVTAAAAAHGKTPAQAVLRWHLQK 225
Query: 714 GNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHR 754
G + PKSV R+EEN +FDF+L +I ID+ +
Sbjct: 226 GFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPGDG 266
Score = 297 bits (764), Expect = 1e-95
Identities = 93/280 (33%), Positives = 134/280 (47%), Gaps = 43/280 (15%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
F+ + AV A+++GYRH D A Y NE +G AI I R+D+FITTKLW
Sbjct: 22 FKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAA----SGIARDDLFITTKLW 77
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
+ D + ESL L +D V+LYL+HWP +Y
Sbjct: 78 NDRHD-GDEPAAAIAESLAKLALDQVDLYLVHWPTPAAD-------------------NY 117
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
V W+ M L GL RSIGVSN LE ++ + P NQ IE+HP Q+
Sbjct: 118 VHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQ------IELHPAYQQR 171
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------Q 238
++ + +D+ I ++ PL + K + + V A+ + KTPAQ Q
Sbjct: 172 EITDWAAAHDVKIESWGPLG------QGKYD-LFGAEPVTAAAAAHGKTPAQAVLRWHLQ 224
Query: 239 LGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDAN 278
G + PKSV + RLEEN D+FDF+L+ ++ +D +D
Sbjct: 225 KGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDPG 264
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium
smegmatis} PDB: 2wzt_A
Length = 283
Score = 355 bits (913), Expect = e-117
Identities = 101/349 (28%), Positives = 157/349 (44%), Gaps = 79/349 (22%)
Query: 407 QPMQATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYE 466
QA + P VT N+ P+ G+G + E +++V A++ GYR ID A Y
Sbjct: 4 SHGQAAAI----PTVTLNDDNTLPVVGIGVGELSDSEAERSVSAALEAGYRLIDTAAAYG 59
Query: 467 NEDEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLI 526
NE VG AI + + R+++Y+T+KL + A + +L+ L LDY+DLYLI
Sbjct: 60 NEAAVGRAI----AASGIPRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLI 115
Query: 527 HWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADA 586
HWP
Sbjct: 116 ----------------------HWPGG--------------------------------- 120
Query: 587 NGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHP 646
+ YVD+W + K+ DG+ +SIGV NF ++ ++ I+ P VNQ+E HP
Sbjct: 121 ------DTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHP 174
Query: 647 YLTQHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQIL 706
L Q L++ I+ AY PLG G LLD P + IA + +T+AQ+L
Sbjct: 175 LLNQAALREVNAGYNIVTEAYGPLGV--------G--RLLDHPAVTAIAEAHGRTAAQVL 224
Query: 707 IKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
+++ +Q GN+ I +S P RI N +F FEL ++++T++ + RF
Sbjct: 225 LRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTRF 273
Score = 302 bits (776), Expect = 2e-97
Identities = 91/283 (32%), Positives = 137/283 (48%), Gaps = 45/283 (15%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
+ + E +V A++ GYR D A Y NE +G AI S I R++I++TTKL
Sbjct: 30 GELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAA--SG--IPRDEIYVTTKLA 85
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
+ + SL+ L +DYV+LYL+HWP D+ Y
Sbjct: 86 TPDQG-FTSSQAAARASLERLGLDYVDLYLIHWP-------------------GGDTSKY 125
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
VD W + + ++G+ARSIGV NF + LET++ + P NQ IE+HP L Q
Sbjct: 126 VDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQ------IELHPLLNQA 179
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------Q 238
+ ++V AY PL ++ L+ V IA + +T AQ+ Q
Sbjct: 180 ALREVNAGYNIVTEAYGPLG------VGRL---LDHPAVTAIAEAHGRTAAQVLLRWSIQ 230
Query: 239 LGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRT 281
LGN+ + +S R+ N D+F FEL+ ++M+TL+GLD R
Sbjct: 231 LGNVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTRF 273
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus
subtilis} PDB: 3d3f_A*
Length = 276
Score = 354 bits (910), Expect = e-117
Identities = 125/344 (36%), Positives = 180/344 (52%), Gaps = 79/344 (22%)
Query: 414 MAINF-PFVTFNNGLKFPIFGLGTWKSKKG-EVKQAVGYAIDIGYRHIDCAHVYENEDEV 471
M + V +NG++ P FGLG +K + G E ++V AI GYR ID A +Y+NE+ V
Sbjct: 1 MPTSLKDTVKLHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGV 60
Query: 472 GDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQA 531
G I K++ V RE+L+ITSK+WN + A +K+L+ L+LDYLDLYLI
Sbjct: 61 GIGI----KESGVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLI----- 111
Query: 532 YKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTL 591
HWP
Sbjct: 112 -----------------HWP---------------------------------------- 114
Query: 592 YSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQH 651
D Y DTW +EKL DG +++IGVSNF ++++L IKP+VNQVE HP LTQ
Sbjct: 115 GKDK-YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQK 173
Query: 652 KLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQV 711
+L+ +C+ + I + A+SPL G LLD+ + +IA K+NK+ AQ+++++ +
Sbjct: 174 ELRDYCKGQGIQLEAWSPLMQ--------GQ--LLDNEVLTQIAEKHNKSVAQVILRWDL 223
Query: 712 QQGNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRF 755
Q G + IPKS+ RI ENA IFDFEL+ ED+ ID+ N++ R
Sbjct: 224 QHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERV 267
Score = 299 bits (769), Expect = 2e-96
Identities = 104/281 (37%), Positives = 155/281 (55%), Gaps = 47/281 (16%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLWITFYSS 70
E E+V AI GYR D A Y+NE +G I++ S + RE++FIT+K+W
Sbjct: 32 EATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKE--SG--VAREELFITSKVWNEDQG- 86
Query: 71 PDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKT 130
+ ++SL+ LQ+DY++LYL+HWP G D Y D W+
Sbjct: 87 YETTLAAFEKSLERLQLDYLDLYLIHWP-----GKD----------------KYKDTWRA 125
Query: 131 MECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKKMAAFC 190
+E L +G R+IGVSNF LE LL A IKP+ NQ +E HP LTQK++ +C
Sbjct: 126 LEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQ------VEFHPRLTQKELRDYC 179
Query: 191 RDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------QLGNITV 244
+ + + A+SPL + ++ L+++ + IA +++K+ AQ+ Q G +T+
Sbjct: 180 KGQGIQLEAWSPLM------QGQL---LDNEVLTQIAEKHNKSVAQVILRWDLQHGVVTI 230
Query: 245 PKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCCVP 285
PKS+ + R+ EN DIFDFELSQEDMD +D L+ + R P
Sbjct: 231 PKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERVGPNP 271
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc,
PSI-biology, structural genomics; 1.96A {Sinorhizobium
meliloti}
Length = 298
Score = 354 bits (911), Expect = e-117
Identities = 88/347 (25%), Positives = 153/347 (44%), Gaps = 81/347 (23%)
Query: 409 MQATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENE 468
+ M +NG P G GT++ EV + + A+ +G+RH+D A +Y NE
Sbjct: 18 LYFQSM----MHAVSSNGANIPALGFGTFRMSGAEVLRILPQALKLGFRHVDTAQIYGNE 73
Query: 469 DEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHW 528
EVG+AI + + + R D+++T+K+W +R D ++ ++L+ L+ D++DL L+H
Sbjct: 74 AEVGEAI----QKSGIPRADVFLTTKVWVDNYRHDAFIASVDESLRKLRTDHVDLLLLH- 128
Query: 529 PQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANG 588
WP
Sbjct: 129 ---------------------WP------------------------------------- 130
Query: 589 KTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYL 648
SD + + ++ G V+ IG+SNFN+ Q+++ NQVE HPYL
Sbjct: 131 ---GSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYL 187
Query: 649 TQHKLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIK 708
Q K+ Q + +T+Y + + G + DP + EI ++ KT+AQ+ ++
Sbjct: 188 DQTKVLQTARRLGMSLTSYYAMAN--------GK--VPADPLLTEIGGRHGKTAAQVALR 237
Query: 709 YQVQQGN-ICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHR 754
+ VQQ + I + K+ T +R++EN IFDF L E++ + R +
Sbjct: 238 WLVQQQDVIVLSKTATEARLKENFAIFDFALTREEMAAVRELARPNG 284
Score = 301 bits (772), Expect = 2e-96
Identities = 90/284 (31%), Positives = 134/284 (47%), Gaps = 47/284 (16%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
F+ EV + A+ LG+RH D A Y NE ++GEAIQ S I R D+F+TTK+W
Sbjct: 42 FRMSGAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQK--SG--IPRADVFLTTKVW 97
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
+ Y D + ESL L+ D+V+L L+HWP + V
Sbjct: 98 VDNYR-HDAFIASVDESLRKLRTDHVDLLLLHWPGS--------------------DVPM 136
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
+ + + + G R IG+SNFNT Q+E ++ TNQ +E HPYL Q
Sbjct: 137 AERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQ------VEYHPYLDQT 190
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------- 237
K+ R + +T+Y ++ KV D + +I R+ KT AQ+
Sbjct: 191 KVLQTARRLGMSLTSYYAMA------NGKV---PADPLLTEIGGRHGKTAAQVALRWLVQ 241
Query: 238 QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRT 281
Q I + K+ T++RL+EN IFDF L++E+M + L
Sbjct: 242 QQDVIVLSKTATEARLKENFAIFDFALTREEMAAVRELARPNGR 285
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography;
1.80A {Brucella melitensis biovar}
Length = 283
Score = 353 bits (909), Expect = e-117
Identities = 110/337 (32%), Positives = 159/337 (47%), Gaps = 75/337 (22%)
Query: 414 MAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENEDEVGD 473
M + P V N+G P G G W+ E AV A+ GYRHID A +Y NE+ VG
Sbjct: 22 MIMTVPTVKLNDGNHIPQLGYGVWQISNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGK 81
Query: 474 AIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYK 533
AI + + R D+++T+KLWN+ + A +L+ L DY+DLYLI
Sbjct: 82 AI----NGSGIARADIFLTTKLWNSDQGYESTLKAFDTSLKKLGTDYVDLYLI------- 130
Query: 534 ALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYS 593
HWP S
Sbjct: 131 ---------------HWPMP---------------------------------------S 136
Query: 594 DANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHKL 653
+++TW KL +G VKSIGVSNF + ++ ++ + + PV+NQ+E HP Q +L
Sbjct: 137 KDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQDEL 196
Query: 654 KQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQQ 713
+ + + I A+SPLG G LL+DP +K IA K+ K+ AQI++++ ++
Sbjct: 197 RLFHGKHDIATEAWSPLGQ--------G--KLLEDPTLKSIAEKHAKSVAQIILRWHIET 246
Query: 714 GNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFN 750
GNI IPKS+TP+RI+EN IFDF L D I +
Sbjct: 247 GNIVIPKSITPARIKENFDIFDFTLNGTDHDAITKLD 283
Score = 299 bits (769), Expect = 3e-96
Identities = 105/278 (37%), Positives = 144/278 (51%), Gaps = 45/278 (16%)
Query: 5 FQSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFITTKLW 64
+Q E AV A+ GYRH D A Y NE +G+AI S I R DIF+TTKLW
Sbjct: 45 WQISNDEAVSAVSEALKAGYRHIDTATIYGNEEGVGKAING--SG--IARADIFLTTKLW 100
Query: 65 ITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDY 124
+ + K SL L DYV+LYL+HWP +P K +
Sbjct: 101 NSDQG-YESTLKAFDTSLKKLGTDYVDLYLIHWP---------MPSKDL----------F 140
Query: 125 VDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQK 184
++ W+ L +EG +SIGVSNF T LE L+ + + PV NQ IE+HP Q
Sbjct: 141 METWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQ------IELHPQFQQD 194
Query: 185 KMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTVKDIASRYDKTPAQI------Q 238
++ F +D+ A+SPL + K+ LED T+K IA ++ K+ AQI +
Sbjct: 195 ELRLFHGKHDIATEAWSPLG------QGKL---LEDPTLKSIAEKHAKSVAQIILRWHIE 245
Query: 239 LGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLD 276
GNI +PKS+T +R++EN DIFDF L+ D D + LD
Sbjct: 246 TGNIVIPKSITPARIKENFDIFDFTLNGTDHDAITKLD 283
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel,
oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1
PDB: 1pz0_A*
Length = 312
Score = 138 bits (350), Expect = 2e-36
Identities = 76/312 (24%), Positives = 117/312 (37%), Gaps = 74/312 (23%)
Query: 9 EREVYEAVCHAIDLGYRHFDCAYYY---QNEGQIGEAIQDKISQGVITREDIFITTKL-- 63
E E V AI G D AY Y ++E IGE +++ RED+ I TK
Sbjct: 34 EETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLRE------FNREDVVIATKAAH 87
Query: 64 -----WITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDF 118
F +SPD ++K + ESL L DY++L+ +H+P
Sbjct: 88 RKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFP-------------------- 127
Query: 119 DDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARY-LFLIEV 177
D+ + + + G RSIGVSNF+ +QL+ + Q Y L E
Sbjct: 128 DEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLV--DVLQGEYNLLNREA 185
Query: 178 HPYLTQKKMAAFCRDNDLVITAYSPLSN-------------PTNPFRAKVP-FVLED--- 220
+K + +++++ Y PL + P R + F E
Sbjct: 186 -----EKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKE 240
Query: 221 -----QTVKDIASRYDKTPAQIQL------GNITVPKSVTK--SRLEENRDIFDFELSQE 267
+ IA +++ I L I + K +L +N D LSQE
Sbjct: 241 NIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQE 300
Query: 268 DMDTLDGLDANG 279
D+ +D L A G
Sbjct: 301 DISFIDKLFAPG 312
Score = 102 bits (256), Expect = 5e-24
Identities = 75/374 (20%), Positives = 128/374 (34%), Gaps = 123/374 (32%)
Query: 424 NNGLKFPIFGLGTW---------KSKKGEVKQAVGYAIDIGYRHIDCAHVY---ENEDEV 471
+ L+ GLGT + K+ V AI G +D A++Y +E+ +
Sbjct: 8 KSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELI 67
Query: 472 GDAIAQKLKDNVVKREDLYITSKLWNTFH--------RPDLVKPALQKTLQNLKLDYLDL 523
G+ + + RED+ I +K + PD +K ++ ++L+ L DY+DL
Sbjct: 68 GEVLRE------FNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDL 121
Query: 524 YLIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFP 583
+ Y IH+P D P
Sbjct: 122 F---------------------Y-IHFP---------------------------DEHTP 132
Query: 584 ADANGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPV-VNQV 642
D + + ++ G ++SIGVSNF+ +Q+++ V V Q
Sbjct: 133 KD-------------EAVNALNEMKKAGKIRSIGVSNFSLEQLKEAN---KDGLVDVLQG 176
Query: 643 ECHPY--LTQH---KLKQWCEERQILITAYSPLGS------PDRPWAKPGDPSLLDDP-- 689
E Y L + + +E I Y PL S P +
Sbjct: 177 E---YNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHF 233
Query: 690 -------------KIKEIAAKYNKTSAQILIKYQVQQGN--ICIPKSVTPSRIEENAQIF 734
K+ IA K+N I++ + + + I IP + ++ +N +
Sbjct: 234 KGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTA 293
Query: 735 DFELAPEDIQTIDS 748
D L+ EDI ID
Sbjct: 294 DVTLSQEDISFIDK 307
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto
reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A
{Bacillus subtilis} SCOP: c.1.7.1
Length = 333
Score = 135 bits (342), Expect = 4e-35
Identities = 68/311 (21%), Positives = 119/311 (38%), Gaps = 82/311 (26%)
Query: 9 EREVYEAVCHAIDLGYRHFDCAYYY---QNEGQIGEAIQDKISQGVITREDIFITTKL-- 63
E+ E + A+D G D A Y Q+E +G+AI+ + R+ + + TK
Sbjct: 33 EKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIK-----EYMKRDQVILATKTAL 87
Query: 64 -----WITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDF 118
+ +++ I + ++ SL LQ DY++LY +HWP
Sbjct: 88 DWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWP-------------------- 127
Query: 119 DDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARY-LFL--I 175
D V + + M+ L D G R+IGVSNF+ +Q++T VA + T Q Y LF +
Sbjct: 128 DPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPL--HTIQPPYNLFEREM 185
Query: 176 EVHPYLTQKKMAAFCRDNDLVITAYSPLSN-------------PTNPFRAKVP-FVLED- 220
E + + + +DN + Y L + R P F
Sbjct: 186 E-------ESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRF 238
Query: 221 -------QTVKDIA-SRYDKTPAQIQL------GNITVP----KSVTKSRLEENRDIFDF 262
+ +A +RY K+ + + + + +LE +I +
Sbjct: 239 KEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKP--GQLEALSEITGW 296
Query: 263 ELSQEDMDTLD 273
L+ ED ++
Sbjct: 297 TLNSEDQKDIN 307
Score = 99.2 bits (248), Expect = 9e-23
Identities = 66/375 (17%), Positives = 130/375 (34%), Gaps = 124/375 (33%)
Query: 424 NNGLKFPIFGLGTW--------KSKKGEVKQAVGYAIDIGYRHIDCAHVY---ENEDEVG 472
+ G++ GLGTW + + + + A+D G ID A Y ++E+ VG
Sbjct: 8 DTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVG 67
Query: 473 DAIAQKLKDNVVKREDLYITSKLWNTFH--------RPDLVKPALQKTLQNLKLDYLDLY 524
AI +KR+ + + +K + + ++ +L+ L+ DY+DLY
Sbjct: 68 KAIK-----EYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLY 122
Query: 525 LIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPA 584
+HWP D L P
Sbjct: 123 ---------------------Q-VHWP---------------------------DPLVPI 133
Query: 585 DANGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVEC 644
+ +T M++L G +++IGVSNF+ +Q+ + Q
Sbjct: 134 E-------------ETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPL--HTIQPP- 177
Query: 645 HPY--LT---QHKLKQWCEERQILITAYSPLGS--------PDRPWAKPGDPSLLDDPK- 690
Y + + + ++ +I Y L + + GD DPK
Sbjct: 178 --YNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTF--EGDDLRNHDPKF 233
Query: 691 --------------IKEIA-AKYNKTSAQILIKYQVQQGNIC--IPKSVTPSRIEENAQI 733
+ ++A +Y K+ + +++ + Q + + P ++E ++I
Sbjct: 234 QKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEI 293
Query: 734 FDFELAPEDIQTIDS 748
+ L ED + I++
Sbjct: 294 TGWTLNSEDQKDINT 308
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR,
AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans}
Length = 348
Score = 135 bits (341), Expect = 7e-35
Identities = 58/311 (18%), Positives = 114/311 (36%), Gaps = 81/311 (26%)
Query: 9 EREVYEAVCHAIDLGYRHFDCAYYY---QNEGQIGEAIQDKISQGVITREDIFITTK--- 62
+ + A+D G D A Y +E +G A+ +K + TK
Sbjct: 51 DDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAEK-------PNKAHVATKLGL 103
Query: 63 ---------LWITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKAD 113
+ + S P IRK +++SL L+++ ++L +HWP
Sbjct: 104 HWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWP--------------- 148
Query: 114 GKFDFDDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVT-NQARY- 171
DD + + ++ L +G R++GVSNF+ +Q++ VA P+ Q
Sbjct: 149 -----DDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVA---PLATIQPPLN 200
Query: 172 LFLIEVHPYLTQKKMAAFCRDNDLVITAYSPLSN-------------PTNPFRAKVP-FV 217
LF + +K + + ++ V+ AY L P + R+ P F
Sbjct: 201 LFERTI-----EKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDPKFQ 255
Query: 218 LED--------QTVKDIASRYDKTPAQIQL------GNITV-PKSVTKSRLEENRDIFDF 262
+ + +A + K+ + G + + ++ +D+F +
Sbjct: 256 KPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQGPVIALWGARKPGQVSGVKDVFGW 315
Query: 263 ELSQEDMDTLD 273
L+ E+ +D
Sbjct: 316 SLTDEEKKAVD 326
Score = 112 bits (282), Expect = 5e-27
Identities = 66/365 (18%), Positives = 127/365 (34%), Gaps = 103/365 (28%)
Query: 424 NNGLKFPIFGLGTW--------KSKKGEVKQAVGYAIDIGYRHIDCAHVY---ENEDEVG 472
LGTW + + A+D G ID A VY +E+ VG
Sbjct: 26 GIDTPLSRVALGTWAIGGWMWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVG 85
Query: 473 DAIAQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAY 532
A+A+K ++ +KL + D K ++ + + +
Sbjct: 86 RALAEK-------PNKAHVATKLGLHWVGED---EKNMKVFRDSRPARI-------RKEV 128
Query: 533 KA-LQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTL 591
+ L+ L+++ +DL IHWP D P D
Sbjct: 129 EDSLRRLRVETIDLEQIHWP---------------------------DDKTPID------ 155
Query: 592 YSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPV-VNQVECHPY--L 648
++ E++KL DG ++++GVSNF+ +Q+ + P+ Q
Sbjct: 156 -------ESARELQKLHQDGKIRALGVSNFSPEQMDIFR---EVAPLATIQPP---LNLF 202
Query: 649 T---QHKLKQWCEERQILITAYSPLGS------PDRPWAKPGDPSLLDDPK--------- 690
+ + + E+ ++ AY L +R P D +DPK
Sbjct: 203 ERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKY 262
Query: 691 ------IKEIAAKYNKTSAQILIKYQVQQGNIC-IPKSVTPSRIEENAQIFDFELAPEDI 743
+++A K K+ +++ + QG + + + P ++ +F + L E+
Sbjct: 263 LAAMDEFEKLAEKRGKSVMAFAVRWVLDQGPVIALWGARKPGQVSGVKDVFGWSLTDEEK 322
Query: 744 QTIDS 748
+ +D
Sbjct: 323 KAVDD 327
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto
reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB:
1og6_A*
Length = 319
Score = 120 bits (304), Expect = 3e-30
Identities = 66/348 (18%), Positives = 111/348 (31%), Gaps = 77/348 (22%)
Query: 424 NNGLKFPIFGLGT-----WKSKKGEVKQAVGYAIDIGYRHIDCAHVY---ENEDEVGDAI 475
G +F F +G W ++ + +D+G +D A +Y + E G+A
Sbjct: 30 PQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEA- 88
Query: 476 AQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDL---YLIHWPQAY 532
LK RE + I SK + + ++I A
Sbjct: 89 ---LKLAPHLRERMEIVSKCGIATTAREENVIG-----------HYITDRDHIIK--SAE 132
Query: 533 KALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLY 592
++L NL D+LDL LIH P D L AD
Sbjct: 133 QSLINLATDHLDLLLIHRP---------------------------DPLMDAD------- 158
Query: 593 SDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQH- 651
+ + L G V+ GVSNF Q + + NQVE P
Sbjct: 159 ------EVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLL 212
Query: 652 --KLKQWCEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTS-AQILIK 708
++ ++ A+S LG R + L D ++ +A + N S Q++
Sbjct: 213 LDGTLDQLQQLRVRPMAWSCLGG-GRLFNDDYFQPLRD--ELAVVAEELNAGSIEQVVNA 269
Query: 709 YQVQQG-NIC-IPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHR 754
+ ++ I S R+ + ++ + I +
Sbjct: 270 WVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYD 317
Score = 115 bits (289), Expect = 3e-28
Identities = 60/296 (20%), Positives = 99/296 (33%), Gaps = 68/296 (22%)
Query: 9 EREVYEAVCHAIDLGYRHFDCA--Y-YYQNEGQIGEAIQDKISQGVITREDIFITTKLWI 65
R++ + +DLG D A Y YQ E GEA++ RE + I +K I
Sbjct: 52 ARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHL----RERMEIVSKCGI 107
Query: 66 TFY-----------SSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADG 114
+ D I K ++SL L D+++L L+H R
Sbjct: 108 ATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIH-----R------------ 150
Query: 115 KFDFDDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFL 174
D +D +V + L G R GVSNF Q L TNQ
Sbjct: 151 ---PDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQ------ 201
Query: 175 IE---VHPYLTQKKMAAFCRDNDLVITAYSPL-----SNPTNPFRAKVPFVLEDQTVKDI 226
+E VH L + + A+S L N F+ + +
Sbjct: 202 VEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDY-FQPLR------DELAVV 254
Query: 227 ASRYD-KTPAQI------QLGNITVP--KSVTKSRLEENRDIFDFELSQEDMDTLD 273
A + + Q+ +L + +P S R+ + +++++ +
Sbjct: 255 AEELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIR 310
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC;
1.25A {Bacillus halodurans} PDB: 1ynq_A*
Length = 317
Score = 103 bits (260), Expect = 2e-24
Identities = 52/303 (17%), Positives = 110/303 (36%), Gaps = 73/303 (24%)
Query: 4 MFQSLEREVYEAVCHAIDLGYRHFDCAYYY---QNEGQIGEAIQDKISQGVITREDIFIT 60
+ E + + ++LG + D A Y NE +G+A++ + R+DI +
Sbjct: 42 SLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGR-------RQDIILA 94
Query: 61 TKLWITFY---------SSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFK 111
TK+ F S I++ +++SL LQ DY++LY +H
Sbjct: 95 TKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHG-------------- 140
Query: 112 ADGKFDFDDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARY 171
DD +D + + E L EG+ R G+S+ ++ L + I V+ +Y
Sbjct: 141 ----GTIDDPID--ETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNI--VSIMMQY 192
Query: 172 LFLI----EVHPYLTQKKMAAFCRDNDLVITAYSPLS------NPTNPFRAKVPFVLEDQ 221
L E P +++ + + P++ P + + ++
Sbjct: 193 SILDRRPEEWFP---------LIQEHGVSVVVRGPVARGLLSRRPLPEGEGYLNYRYDEL 243
Query: 222 TVKDIASRYDKTPAQIQL------GNITVP----KSVTKSRLEENRDIFDFE-LSQEDMD 270
+ + D+ ++ L + S+ +++ N + L+ E+
Sbjct: 244 KLLRESLPTDRPLHELALQYCLAHDVVATVAAGASSI--DQVKANVQAVEATPLTAEERQ 301
Query: 271 TLD 273
+
Sbjct: 302 HIQ 304
Score = 83.8 bits (208), Expect = 1e-17
Identities = 52/345 (15%), Positives = 121/345 (35%), Gaps = 87/345 (25%)
Query: 424 NNGLKFPIFGLGTWK--SKKGEVKQAVGYAIDIGYRHIDCAHVY---ENEDEVGDAIAQK 478
+ L G G + + + ++ + +++G ++D A +Y NE VG A+ +
Sbjct: 28 TSDLHVSELGFGCMSLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGR 87
Query: 479 LKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKA-LQN 537
R+D+ + +K+ N F + + Y+ +A K L+
Sbjct: 88 -------RQDIILATKVGNRFE------QGKEGWWWDPSKAYIK-------EAVKDSLRR 127
Query: 538 LKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPH--IEGDTLFPADANGKTLYSDA 595
L+ DY+DLY +H + I+
Sbjct: 128 LQTDYIDLYQLH---------------------GGTIDDPID------------------ 148
Query: 596 NYVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPY-LTQHKLK 654
+T E+L +G+++ G+S+ I++ L V ++ Y + + +
Sbjct: 149 ---ETIEAFEELKQEGVIRYYGISSIRPNVIKEYL--KRSNIVSIMMQ---YSILDRRPE 200
Query: 655 QW---CEERQILITAYSPLGS-----PDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQIL 706
+W +E + + P+ P + D+ K+ + ++ ++
Sbjct: 201 EWFPLIQEHGVSVVVRGPVARGLLSRRPLPEGEGYLNYRYDELKLLRESLPTDRPLHELA 260
Query: 707 IKYQVQQGNIC--IPKSVTPSRIEENAQIFDFE-LAPEDIQTIDS 748
++Y + + + + +++ N Q + L E+ Q I
Sbjct: 261 LQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQK 305
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L
MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A
3v0t_A* 3uyi_A*
Length = 337
Score = 96.5 bits (240), Expect = 7e-22
Identities = 60/297 (20%), Positives = 104/297 (35%), Gaps = 73/297 (24%)
Query: 18 HAIDLGYRHFDCAYYY----QNEGQIGEAIQDKISQGVITREDIFITTKL--------WI 65
A + G FD + Y NE +G+A++ + RE I + TK +
Sbjct: 42 EAFNCGITFFDTSDIYGENGSNEELLGKALKQ------LPREXIQVGTKFGIHEIGFSGV 95
Query: 66 TFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYV 125
+PD +R C + SL L +DY++L+ +H D +V
Sbjct: 96 KAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRI--------------------DTTVPIE 135
Query: 126 DVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKK 185
+ LV+EG +G+S + +T+ + PVT L + +
Sbjct: 136 ITMGELXXLVEEGKIXYVGLSEASP---DTIRRAHAVHPVTALQIEYSLWTRDI---EDE 189
Query: 186 MAAFCRDNDLVITAYSPLSN------------PTNPFRAKVPFVLED---------QTVK 224
+ CR + I YSP+ P N P + + ++
Sbjct: 190 IVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIE 249
Query: 225 DIASRYDKTPAQIQL------GNITVPKSVTK--SRLEENRDIFDFELSQEDMDTLD 273
++ ++ TP Q+ L G VP T L N L++ED+ +
Sbjct: 250 ALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVXLTKEDLKEIS 306
Score = 72.2 bits (177), Expect = 8e-14
Identities = 53/325 (16%), Positives = 105/325 (32%), Gaps = 85/325 (26%)
Query: 450 YAIDIGYRHIDCAHVY----ENEDEVGDAIAQKLKDNVVKREDLYITSKLWNTFHRPDLV 505
A + G D + +Y NE+ +G A+ Q + RE + + +K H
Sbjct: 42 EAFNCGITFFDTSDIYGENGSNEELLGKALKQ------LPREXIQVGTKF--GIHEIGFS 93
Query: 506 KPALQKTLQNLKLDYLDLYLIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVT 565
T ++ +L+ L +DY+DL+ IH
Sbjct: 94 GVKAXGTPDYVR-----------SCCEASLKRLDVDYIDLFYIH---------------- 126
Query: 566 REMAFRLSPHIEGDTLFPADANGKTLYSDANYVDTWLEMEKLVADGLVKSIGVSNFNSKQ 625
R+ + P + T E+ LV +G + +G+S +
Sbjct: 127 -----RIDTTV------PIE-------------ITMGELXXLVEEGKIXYVGLSEASPDT 162
Query: 626 IQDILDKGTIKPVVNQVECHPYLTQHKLKQWCEERQILITAYSPL------GSPDRPWAK 679
I+ + + + + ++ C + I I YSP+ G +
Sbjct: 163 IRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLP 222
Query: 680 PGD-----PSLLDD---------PKIKEIAAKYNKTSAQILIKYQVQQGN--ICIPKSVT 723
P + + +I+ ++ K+ T Q+ + + + QG + IP +
Sbjct: 223 ENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTK 282
Query: 724 PSRIEENAQIFDFELAPEDIQTIDS 748
+ N L ED++ I
Sbjct: 283 IKNLHNNVGALKVXLTKEDLKEISD 307
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto
reductase, succinic semialdehyde oxidoreductase, AKR7
family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP:
c.1.7.1 PDB: 2clp_A* 2c91_A*
Length = 327
Score = 92.3 bits (230), Expect = 2e-20
Identities = 53/325 (16%), Positives = 94/325 (28%), Gaps = 93/325 (28%)
Query: 9 EREVYEAVCHAIDLGYRHFDCAYYYQN---EGQIGEAIQDKISQGVITREDIFITTKLWI 65
+V + G+ D A+ Y N E +G+ + I TK
Sbjct: 21 VTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRS----GCKVKIATKAAP 76
Query: 66 TF--YSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVD 123
F P +R L+ SL LQ V+L+ +H+P D
Sbjct: 77 MFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFP--------------------DHGTP 116
Query: 124 YVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVAR----IKPVTNQARYLFL----- 174
+ + L EG +G+SN+ + ++ + + + I P Q Y +
Sbjct: 117 IEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVE 176
Query: 175 IEVHPYLTQKKMAAFCRDNDLVITAYSPL------------------------SNPTNPF 210
E+ P R L A++PL NP +
Sbjct: 177 TELFP---------CLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQL 227
Query: 211 RAKVPFVLED--------QTVKDIASRYDKTPAQIQLG--------NITVPKSV-----T 249
+ E + +K + + T +V +
Sbjct: 228 YMDRYWKEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSS 287
Query: 250 KSRLEEN-RDIFDFELSQEDMDTLD 273
+LE+N + + L +D D
Sbjct: 288 LEQLEQNLALVEEGPLEPAVVDAFD 312
Score = 61.9 bits (151), Expect = 2e-10
Identities = 55/379 (14%), Positives = 107/379 (28%), Gaps = 133/379 (35%)
Query: 430 PIFGLGT----WKSKKGEVKQAVGYAIDIGYRHIDCAHVY---ENEDEVGDAIAQKLKDN 482
P LG + +V + G+ ID A VY ++E +GD
Sbjct: 6 PATVLGAMEMGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDL----GLGL 61
Query: 483 VVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKALQNLKLDY 542
+ I +K F + L ++ L+ +L+ L+
Sbjct: 62 GRSGCKVKIATKAAPMFGK-TLKPADVRFQLET------------------SLKRLQCPR 102
Query: 543 LDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSDANYVDTWL 602
+DL+ +H+P D +P IE +T
Sbjct: 103 VDLFYLHFP-------D-----------HGTP-IE---------------------ETLQ 122
Query: 603 EMEKLVADGLVKSIGVSNFNSKQIQDILD----KGTIKPVVNQVECHPY--LTQHKLKQW 656
+L +G +G+SN+ S ++ +I G I P V Q Y +T+
Sbjct: 123 ACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGM---YNAITRQ----- 174
Query: 657 CEERQIL---------ITAYSPLG--------SPDRPWAKPGDPSLLDDP---------- 689
E ++ A++PL K + +P
Sbjct: 175 -VETELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMDRYW 233
Query: 690 -------------KIKEIAAKYNKTSAQILIKYQVQQGNICIPKSV-------TPSRIEE 729
+K + +++ + + + ++E+
Sbjct: 234 KEEHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQ 293
Query: 730 NAQIFDF-ELAPEDIQTID 747
N + + L P + D
Sbjct: 294 NLALVEEGPLEPAVVDAFD 312
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone,
NADPH, cytoplasm, ION transport, ionic channel, NADP,
phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus}
SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A*
3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Length = 327
Score = 86.5 bits (215), Expect = 2e-18
Identities = 68/399 (17%), Positives = 115/399 (28%), Gaps = 165/399 (41%)
Query: 424 NNGLKFPIFGLGTW-----KSKKGEVKQAVGYAIDIGYRHIDCAHVYEN---EDEVGDAI 475
+GL+ GLGTW + + + A D G D A VY E +G+
Sbjct: 10 KSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNI- 68
Query: 476 AQKLKDNVVKREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAY--- 532
+K +R L IT+K I W
Sbjct: 69 ---IKKKGWRRSSLVITTK-------------------------------IFWGGKAETE 94
Query: 533 -------------KALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGD 579
+L+ L+L+Y+D+ + P
Sbjct: 95 RGLSRKHIIEGLKASLERLQLEYVDVVFANRP---------------------------- 126
Query: 580 TLFPADANGKTLYSDANYVDTWLE-----MEKLVADGLVKSIGVSNFNSKQIQ---DILD 631
D +T +E M ++ G+ G S ++S +I +
Sbjct: 127 --------------DP---NTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVAR 169
Query: 632 K-GTIKPVVNQVECHPYLTQHKLKQWCEERQIL---------ITAYSPL----------- 670
+ I P+ Q E Y H ++ E Q+ +SPL
Sbjct: 170 QFNLIPPICEQAE---Y---HMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 223
Query: 671 GSPD--RPWAKPGDPSLLDDP-------------KIKEIAAKYNKTSAQILIKYQVQQGN 715
G P R + G L D +++ IA + T Q+ I + ++
Sbjct: 224 GIPPYSR-ASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEG 282
Query: 716 ICIPKSV-----TPSRIEENAQIFDF--ELAPEDIQTID 747
+ SV ++ EN +L+ + ID
Sbjct: 283 VS---SVLLGASNAEQLMENIGAIQVLPKLSSSIVHEID 318
Score = 82.6 bits (205), Expect = 3e-17
Identities = 62/327 (18%), Positives = 106/327 (32%), Gaps = 96/327 (29%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQN---EGQIGEAIQDKISQGVITREDIFITTKLWITF 67
+ A D G FD A Y E +G I+ R + ITTK+ F
Sbjct: 34 MAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKK----KGWRRSSLVITTKI---F 86
Query: 68 YSSPD-----LIRKCLQESLD--L--LQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDF 118
+ L RK + E L L LQ++YV++ + R
Sbjct: 87 WGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFAN-----R---------------P 126
Query: 119 DDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVAR----IKPVTNQARY-LF 173
D + + + M ++++G+A G S +++ ++ VAR I P+ QA Y +F
Sbjct: 127 DPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMF 186
Query: 174 ---LIEVHPYLTQKKMAAFCRDNDLVITAYSPL-------------------SNPTNPFR 211
+E ++ + +SPL S +
Sbjct: 187 QREKVE-------VQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWL 239
Query: 212 AKVPFVLEDQTV-------KDIASRYDKTPAQIQL------GNITVPKSV-----TKSRL 253
E + + IA R T Q+ + ++ SV +L
Sbjct: 240 KDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVS---SVLLGASNAEQL 296
Query: 254 EENRDIFDF--ELSQEDMDTLDGLDAN 278
EN +LS + +D + N
Sbjct: 297 MENIGAIQVLPKLSSSIVHEIDSILGN 323
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto
reductase family 7, SSA reductase, barrel; HET: FLC NDP;
2.4A {Homo sapiens}
Length = 360
Score = 86.6 bits (215), Expect = 2e-18
Identities = 42/207 (20%), Positives = 68/207 (32%), Gaps = 43/207 (20%)
Query: 9 EREVYEAVCHAIDLGYRHFDCAYYYQN---EGQIGEAIQDKISQGVITREDIFITTKL-- 63
AV ++ G+ D A+ Y + E +G + I TK
Sbjct: 54 APASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLG----LGLGGGDCRVKIATKANP 109
Query: 64 WITFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVD 123
W PD +R L+ SL LQ V+L+ +H P D
Sbjct: 110 WDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAP--------------------DHGTP 149
Query: 124 YVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVAR----IKPVTNQARYLFL---IE 176
+ + L EG +G+SN+ + ++ + + + I P Q Y +E
Sbjct: 150 VEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVE 209
Query: 177 VHPYLTQKKMAAFCRDNDLVITAYSPL 203
+ R L AY+PL
Sbjct: 210 TE-------LFPCLRHFGLRFYAYNPL 229
Score = 55.0 bits (133), Expect = 5e-08
Identities = 44/260 (16%), Positives = 82/260 (31%), Gaps = 94/260 (36%)
Query: 434 LGT----WKSKKGEVKQAVGYAIDIGYRHIDCAHVY---ENEDEVGDAIAQKLKDNVVKR 486
LGT + AV ++ G+ +D A +Y ++E +G
Sbjct: 43 LGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGL----GGGD 98
Query: 487 EDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKALQNLKLDYLDLY 546
+ I +K + L +++ L+ +L+ L+ +DL+
Sbjct: 99 CRVKIATKANPWDGK-SLKPDSVRSQLET------------------SLKRLQCPQVDLF 139
Query: 547 LIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSDANYVDTWLEMEK 606
+H P D +P +E +T ++
Sbjct: 140 YLHAP-------D-----------HGTP-VE---------------------ETLHACQR 159
Query: 607 LVADGLVKSIGVSNFNSKQIQDILD----KGTIKPVVNQVECHPY--LTQHKLKQWCEER 660
L +G +G+SN+ S ++ +I G I P V Q Y T+ E
Sbjct: 160 LHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGM---YNATTRQ------VET 210
Query: 661 QIL---------ITAYSPLG 671
++ AY+PL
Sbjct: 211 ELFPCLRHFGLRFYAYNPLA 230
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A
{Escherichia coli}
Length = 346
Score = 85.7 bits (213), Expect = 4e-18
Identities = 59/324 (18%), Positives = 121/324 (37%), Gaps = 87/324 (26%)
Query: 11 EVYEAVCHAIDLGYRHFDCAYYYQN-----EGQIGEAIQDKISQGVITREDIFITTKLWI 65
+ A DLG HFD A Y E G +++ + R+++ I+TK
Sbjct: 44 SQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAA---YRDELIISTKAG- 99
Query: 66 TFYSSPD-----LIRKCLQESLDL----LQMDYVNLYLMHWPHAFRSGGDLVPFKADGKF 116
+ P RK L SLD + ++YV+++ H
Sbjct: 100 -YDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRV------------------ 140
Query: 117 DFDDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVAR---IKPVTNQARY-L 172
D++ + + V G A +G+S+++ ++ + ++ + R I + +Q Y L
Sbjct: 141 --DENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNL 198
Query: 173 FLIEVHPYLTQKKMAAFCRDNDLVITAYSPL-------------------SNPTNPFRAK 213
+ ++ + + ++N + A++PL N R
Sbjct: 199 L----NRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGL 254
Query: 214 VPFVLEDQT------VKDIASRYDKTPAQIQL------GNITVPKSV----TK-SRLEEN 256
P +L + + ++A + ++ AQ+ L +T SV ++ +LEEN
Sbjct: 255 TPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVT---SVLIGASRAEQLEEN 311
Query: 257 RDIFDF-ELSQEDMDTLDGLDANG 279
+ S +++ +D A+G
Sbjct: 312 VQALNNLTFSTKELAQIDQHIADG 335
Score = 81.8 bits (203), Expect = 7e-17
Identities = 62/390 (15%), Positives = 132/390 (33%), Gaps = 134/390 (34%)
Query: 424 NNGLKFPIFGLGTW-----KSKKGEVKQAVGYAIDIGYRHIDCAHVYEN-----EDEVGD 473
+GL+ P LG W + + + A D+G H D A+ Y E+ G
Sbjct: 20 KSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGR 79
Query: 474 AIAQKLKDNVVKREDLYITSKL-WNTFHRPDLVKPALQKTLQNL--KLDYLDLYLIHWPQ 530
+ + R++L I++K ++ + P K YL+
Sbjct: 80 LLREDFA---AYRDELIISTKAGYDMWPGP---------YGSGGSRK------YLLA--S 119
Query: 531 AYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKT 590
++L+ + L+Y+D++ H
Sbjct: 120 LDQSLKRMGLEYVDIFYSHRV--------------------------------------- 140
Query: 591 LYSDANYVDTWLE-----MEKLVADGLVKSIGVSNFNSKQIQD---ILDKGTIKPVVNQV 642
D +T +E + V G +G+S+++ ++ Q +L + I +++Q
Sbjct: 141 ---DE---NTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQP 194
Query: 643 ECHPYLTQHKLKQWCEERQIL---------ITAYSPL-----------GSPD-------R 675
Y + L +W ++ +L A++PL G P
Sbjct: 195 S---Y---NLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQDSRMHREG 248
Query: 676 PWAKPGDPSLLDDPKI------KEIAAKYNKTSAQILIKYQVQQGNICIPKSV-----TP 724
+ P +L + + E+A + ++ AQ+ + + ++ + SV
Sbjct: 249 NKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVT---SVLIGASRA 305
Query: 725 SRIEENAQIFDF-ELAPEDIQTIDSFNRNH 753
++EEN Q + + +++ ID +
Sbjct: 306 EQLEENVQALNNLTFSTKELAQIDQHIADG 335
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating,
potassium channel, KV1.2, gating charges, no analysis,
ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Length = 367
Score = 84.6 bits (210), Expect = 1e-17
Identities = 71/385 (18%), Positives = 125/385 (32%), Gaps = 135/385 (35%)
Query: 424 NNGLKFPIFGLGTW-----KSKKGEVKQAVGYAIDIGYRHIDCAHVYEN---EDEVGDAI 475
+GL+ GLGTW + + + A D G D A VY E +G+
Sbjct: 44 KSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNI- 102
Query: 476 AQKLKDNVVKREDLYITSKL-WNTFHRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKA 534
+K +R L IT+K+ W + + +K ++I +A +
Sbjct: 103 ---IKKKGWRRSSLVITTKIFWGGKAETE--RGLSRK------------HIIEGLKA--S 143
Query: 535 LQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSD 594
L+ L+L+Y+D+ + R P
Sbjct: 144 LERLQLEYVDVVFAN---------------------RPDP-------------------- 162
Query: 595 ANYVDTWLE-----MEKLVADGLVKSIGVSNFNSKQIQ---DILDK-GTIKPVVNQVECH 645
+T +E M ++ G+ G S ++S +I + + I P+ Q E
Sbjct: 163 ----NTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAE-- 216
Query: 646 PYLTQHKLKQWCEERQIL---------ITAYSPL-----------GSPD--RPWAKPGDP 683
Y H ++ E Q+ +SPL G P R + G
Sbjct: 217 -Y---HMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSR-ASLKGYQ 271
Query: 684 SLLDDP-------------KIKEIAAKYNKTSAQILIKYQVQQGNICIPKSV-----TPS 725
L D +++ IA + T Q+ I + ++ + SV
Sbjct: 272 WLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVS---SVLLGASNAE 328
Query: 726 RIEENAQIFDF--ELAPEDIQTIDS 748
++ EN +L+ + IDS
Sbjct: 329 QLMENIGAIQVLPKLSSSIVHEIDS 353
Score = 80.8 bits (200), Expect = 2e-16
Identities = 61/326 (18%), Positives = 107/326 (32%), Gaps = 90/326 (27%)
Query: 9 EREVYEAVCHAIDLGYRHFDCAYYYQN---EGQIGEAIQDKISQGVITREDIFITTKL-W 64
+ + A D G FD A Y E +G I+ R + ITTK+ W
Sbjct: 66 DEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKK----KGWRRSSLVITTKIFW 121
Query: 65 ITFY-----SSPDLIRKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFD 119
S I + L+ SL+ LQ++YV++ + R D
Sbjct: 122 GGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFAN-----R---------------PD 161
Query: 120 DSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVAR----IKPVTNQARY-LF- 173
+ + + M ++++G+A G S +++ ++ VAR I P+ QA Y +F
Sbjct: 162 PNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQ 221
Query: 174 --LIEVHPYLTQKKMAAFCRDNDLVITAYSPL-------------------SNPTNPFRA 212
+E ++ + +SPL S +
Sbjct: 222 REKVE-------VQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLK 274
Query: 213 KVPFVLEDQTV-------KDIASRYDKTPAQIQL------GNITVPKSV-----TKSRLE 254
E + + IA R T Q+ + ++ SV +L
Sbjct: 275 DKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVS---SVLLGASNAEQLM 331
Query: 255 ENRDIFDF--ELSQEDMDTLDGLDAN 278
EN +LS + +D + N
Sbjct: 332 ENIGAIQVLPKLSSSIVHEIDSILGN 357
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F,
structural GE oxidoreductase; HET: NDP; 1.60A
{Escherichia coli} SCOP: c.1.7.1
Length = 346
Score = 83.4 bits (207), Expect = 2e-17
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 71/274 (25%)
Query: 54 REDIFITTKLWITFYSSPDL-------------IRKCLQESLDLLQMDYVNLYLMHWPHA 100
RE + I +K ++ S + IR+ L +SL LQ DY++LY +HWP
Sbjct: 79 REKLIIASK--VSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQ- 135
Query: 101 FRSGGDLVPFKADGKFDF---DDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLL 157
R + + +V +D + G R IGVSN + L
Sbjct: 136 -RP----TNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYL 190
Query: 158 GVARI----KPVTNQARYLFL---IEVHPYLTQKKMAAFCRDNDLVITAYSPL------- 203
+A + VT Q Y L EV +A + + + AYS L
Sbjct: 191 HLADKHDLPRIVTIQNPYSLLNRSFEVG-------LAEVSQYEGVELLAYSCLGFGTLTG 243
Query: 204 -----SNPTNPFRAKVPFV---LEDQTVK------DIASRYDKTPAQIQLG--------- 240
+ P +QT K DIA R+ PAQ+ L
Sbjct: 244 KYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVA 303
Query: 241 -NITVPKSVTKSRLEENRDIFDFELSQEDMDTLD 273
+ ++ +L+ N + ELS++ + ++
Sbjct: 304 STLLGATTM--DQLKTNIESLHLELSEDVLAEIE 335
Score = 61.0 bits (149), Expect = 5e-10
Identities = 67/360 (18%), Positives = 121/360 (33%), Gaps = 110/360 (30%)
Query: 450 YAIDIGYRHIDCAHVY----------ENEDEVGDAIAQKLKDNVVKREDLYITSKL---- 495
YA+ G ID A +Y E VG+ +A+ RE L I SK+
Sbjct: 38 YAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH-----GSREKLIIASKVSGPS 92
Query: 496 --WNTFHRPDL------VKPALQKTLQNLKLDYLDLYLIHWPQAYKALQNLKLDYLDLYL 547
+ RPD ++ AL +L+ L+ DYLDLY +HWPQ
Sbjct: 93 RNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQ----------------- 135
Query: 548 IHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSDANYVDTWLEMEKL 607
R + D+ + +DT + +
Sbjct: 136 -----------------------RPTNCFGKLGYSWTDSAPAV-----SLLDTLDALAEY 167
Query: 608 VADGLVKSIGVSNFNSKQIQDIL----DKGTIKPVVNQVECHPY--LTQH---KLKQWCE 658
G ++ IGVSN + + L + V Q +PY L + L + +
Sbjct: 168 QRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQ---NPYSLLNRSFEVGLAEVSQ 224
Query: 659 ERQILITAYSPLGS---------PDRP----WAKPGDPSLLDDPKIK-------EIAAKY 698
+ + AYS LG +P + + + +IA ++
Sbjct: 225 YEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRH 284
Query: 699 NKTSAQILIKYQVQQ----GNICIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHR 754
AQ+ + + +Q + T +++ N + EL+ + + I++ ++ +
Sbjct: 285 GLDPAQMALAFVRRQPFVASTLLGAT--TMDQLKTNIESLHLELSEDVLAEIEAVHQVYT 342
>3erp_A Putative oxidoreductase; funded by the national institute of
allergy and infectious D of NIH contract number
HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Length = 353
Score = 82.6 bits (205), Expect = 4e-17
Identities = 64/318 (20%), Positives = 119/318 (37%), Gaps = 87/318 (27%)
Query: 9 EREVYEAVCHAIDLGYRHFDCAYYYQN-----EGQIGEAIQDKISQGVITREDIFITTKL 63
+ A DLG HFD A Y E G +Q+ + R+++ I+TK
Sbjct: 63 VENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQE---DFLPWRDELIISTKA 119
Query: 64 WITFYSSPD---LIRKCLQESLDL----LQMDYVNLYLMHWPHAFRSGGDLVPFKADGKF 116
T + P RK L SLD + ++YV+++ H P
Sbjct: 120 GYTMWDGPYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRP------------------ 161
Query: 117 DFDDSVDYVDVWKTMECL---VDEGLARSIGVSNFNTKQLETLLGVAR---IKPVTNQAR 170
D + + +TM+ L V G A +G+SN+ + + + +Q +
Sbjct: 162 DPE-----TPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQPK 216
Query: 171 Y-LFLIEVHPYLTQKKMAAFCRDNDLVITAYSPLSNP--TNPFRAKVP----------FV 217
Y LF V + + A ++ + A+SPL+ T+ + +P F+
Sbjct: 217 YSLFERWV-----EDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNGIPEDSRAASGSRFL 271
Query: 218 LED----------QTVKDIASRYDKTPAQIQL------GNITVPKSV----TK-SRLEEN 256
+ + + ++A+R + +Q+ L N+T SV +K S++E+
Sbjct: 272 KPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVT---SVLIGASKPSQIEDA 328
Query: 257 RDIFDF-ELSQEDMDTLD 273
+ S + +D
Sbjct: 329 VGMLANRRFSAAECAEID 346
Score = 78.8 bits (195), Expect = 8e-16
Identities = 69/381 (18%), Positives = 129/381 (33%), Gaps = 132/381 (34%)
Query: 424 NNGLKFPIFGLGTW-----KSKKGEVKQAVGYAIDIGYRHIDCAHVYEN-----EDEVGD 473
+G+K P LG W ++ + + A D+G H D A+ Y E G
Sbjct: 41 RSGVKLPAISLGLWHNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGR 100
Query: 474 AIAQKLKDNVVKREDLYITSKL-WNTFHRPDLVKPALQKTLQNL--KLDYLDLYLIHWPQ 530
+ +D + R++L I++K + + P K YLI
Sbjct: 101 ILQ---EDFLPWRDELIISTKAGYTMWDGP---------YGDWGSRK------YLIA--S 140
Query: 531 AYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKT 590
++L+ + L+Y+D++ H P
Sbjct: 141 LDQSLKRMGLEYVDIFYHHRP--------------------------------------- 161
Query: 591 LYSDANYVDTWLE-----MEKLVADGLVKSIGVSNFNSKQIQD---ILDKGTIKPVVNQ- 641
D T L+ ++ LV G +G+SN+ + + IL+ +++Q
Sbjct: 162 ---DPE---TPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQP 215
Query: 642 --------VECHPYLTQHKLKQWCEERQILITAYSPL-----------GSPDRPWAKPGD 682
VE L +E+ + A+SPL G P+ A G
Sbjct: 216 KYSLFERWVE-------DGLLALLQEKGVGSIAFSPLAGGQLTDRYLNGIPEDSRAASGS 268
Query: 683 PSLLDDP----------KIKEIAAKYNKTSAQILIKYQVQQGNICIPKSV-----TPSRI 727
L + ++ E+AA+ + +Q+ + + ++ N+ SV PS+I
Sbjct: 269 RFLKPEQITADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVT---SVLIGASKPSQI 325
Query: 728 EENAQIFDF-ELAPEDIQTID 747
E+ + + + ID
Sbjct: 326 EDAVGMLANRRFSAAECAEID 346
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 63.3 bits (153), Expect = 2e-10
Identities = 105/736 (14%), Positives = 206/736 (27%), Gaps = 273/736 (37%)
Query: 25 RHFDCAYYYQNEGQIGEAIQDKISQGVITRE---DIFI-------TTKLWITFYSSPDLI 74
+FDC +QD + + ++++E I + T +L+ T S + +
Sbjct: 31 DNFDCKD-----------VQD-MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78
Query: 75 RKCLQESLDLLQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKTMECL 134
+ E ++L+++Y +LM P K + + + Y++ +
Sbjct: 79 VQKFVE--EVLRINYK--FLMS------------PIKTEQRQPSMMTRMYIEQRDRL--- 119
Query: 135 VDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQARYLFLIEVHPYLTQKKMAAF----- 189
+N Q+ V+R++P + L + + +
Sbjct: 120 -------------YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV 166
Query: 190 ----CRDNDLVITAYSP-----LSNPTNPFRAKVPFVLED---QTVKDIASRYDKTPAQI 237
C + L N +P V +L+ Q + SR D +
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSP--ETVLEMLQKLLYQIDPNWTSRSDHSS--- 221
Query: 238 QLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTLDGLDANGRTCCVPGRMVENTMLILL 297
NI + ++ L R + + + + L + V+N
Sbjct: 222 ---NIKLRIHSIQAEL---RRLLKSKPYENCLLVLL--N------------VQNAKAWNA 261
Query: 298 LQL-C---ILTNDHIPSSYLPATEYQVV--------LTPDEQTHYQVGPTGTAEKVCQVY 345
L C + T + +L A + LTPDE
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE----------VKS------ 305
Query: 346 MIPDEHTHYQVVLTTVTNSSQENQGSKRQARLQIQIPTQQNKTIPVILSWALTSFIFTNS 405
+L + + +P + T P LS I S
Sbjct: 306 -----------LLLKYLDCRPQ------------DLPREVLTTNPRRLS------IIAES 336
Query: 406 FQPMQATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGYAIDIGYRHIDCAHVY 465
+ A T++N WK + + I+ ++
Sbjct: 337 IRDGLA----------TWDN-----------WKHVNCD---KLTTIIESSLNVLE----- 367
Query: 466 ENEDEVGDAIAQKL-KDNVVKREDLYITSK----LW------------NTFHRPDLVKPA 508
E +K+ V +I + +W N H+
Sbjct: 368 --PAEY-----RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK----YSL 416
Query: 509 LQKTLQNLKLDYLDLYL-----------IH--------WPQAYKALQNLKLDYLDLYLIH 549
++K + + +YL +H P+ + +L YLD Y +
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD-SDDLIPPYLDQY-FY 474
Query: 550 WPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLFPADANGKTLYSDANYVDTWLEMEKLVA 609
+ + N E E TLF ++ D +LE +K+
Sbjct: 475 SHIGHHLKN-------IEHP-------ERMTLFR------MVFLDFR----FLE-QKIRH 509
Query: 610 DGLVKSIGVSNFN--------SKQIQDILDK-----GTIKPVVNQVECHPYLTQHK-LKQ 655
D + S N I D K I + ++E + +++ L +
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR 569
Query: 656 WC---EERQILITAYS 668
E+ I A+
Sbjct: 570 IALMAEDEAIFEEAHK 585
Score = 42.5 bits (99), Expect = 5e-04
Identities = 76/498 (15%), Positives = 147/498 (29%), Gaps = 128/498 (25%)
Query: 344 VYMIPDEHTHYQVVLTT-----VTNSSQENQGSKRQARLQIQIPTQQNKTIPVIL----- 393
+ D + +L+ + S G+ R L + ++Q + + +
Sbjct: 35 CKDVQDM---PKSILSKEEIDHIIMSKDAVSGTLR---LFWTLLSKQEEMVQKFVEEVLR 88
Query: 394 ---SWALTSFIFTNSFQPMQATKMAINFPFVTFNNGLKFPIFGLGTWKSKKGEVKQAVGY 450
+ L S I T QP T+M I +N+ F + + + +++QA+
Sbjct: 89 INYKF-LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV-SRLQPYLKLRQAL-- 144
Query: 451 AIDIGYRHIDCAHVYENEDEVGDA-------IAQKLKDNVVKRE-DLYITSKLWNTF--- 499
+ R + G V+ + D I W
Sbjct: 145 ---LELRPAKNVLID------GVLGSGKTWVALDVCLSYKVQCKMDFKI---FWLNLKNC 192
Query: 500 HRPDLVKPALQKTLQNLKLDYLDLYLIHWPQAYKALQNLKLDYLDLYLIHWPQAYK---- 555
+ P+ V LQK L + ++ K + L L P Y+
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTS--RSDHSSNIKLRIHSIQAELRRLLKSKP--YENCLL 248
Query: 556 ----VSN-------DFPCAV---TR--EMAFRLSPHIEGDTLFPADANGKTLYSD----- 594
V N + C + TR ++ LS D + TL D
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH--ISLDHHSMTLTPDEVKSL 306
Query: 595 -ANYVDTWLEMEKLVADG----LVKSIG--VSNF-----NSKQIQ-DILDKGTIKPVVNQ 641
Y+D + + I + + N K + D L I+ +N
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT-IIESSLNV 365
Query: 642 VECHPYLTQHKLKQWC---EERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKY 698
+E P + + I S + W + + + K
Sbjct: 366 LE--PAEYRKMFDRLSVFPPSAHIPTILLSLI------WFD------VIKSDVMVVVNKL 411
Query: 699 NKTSAQILIKYQVQQGNICIPKSVTPSRIEENAQIFDFELAPEDIQT-----IDSFNRNH 753
+K S L++ Q ++ I IP + + ++ E+ +D +N
Sbjct: 412 HKYS---LVEKQPKESTISIP-----------SIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 754 RFLLLEWVKDHKD-YPFN 770
F + + + D Y ++
Sbjct: 458 TFDSDDLIPPYLDQYFYS 475
Score = 41.8 bits (97), Expect = 0.001
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 53/181 (29%)
Query: 618 VSNFNSKQIQDILDKGTIKPVVNQVEC-HPYLTQHKLKQ-----WCEERQILITAYSPLG 671
V NF+ K +QD+ K ++++ E H +++ + W + +
Sbjct: 30 VDNFDCKDVQDMP-----KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84
Query: 672 S---PDRPW------AKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQVQQGNICIPKSV 722
+ + + PS++ I++ YN Q+ KY V
Sbjct: 85 EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN--DNQVFAKYNV----------- 131
Query: 723 TPSRIEENAQIFD--FELAPEDIQTIDSFNRNH-------RFLLLEWVKDHK---DYPFN 770
SR++ ++ EL P I ++ L+ +K F
Sbjct: 132 --SRLQPYLKLRQALLELRPAKNVLI------DGVLGSGKTWVALDVCLSYKVQCKMDFK 183
Query: 771 I 771
I
Sbjct: 184 I 184
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 50.4 bits (120), Expect = 2e-06
Identities = 98/597 (16%), Positives = 169/597 (28%), Gaps = 226/597 (37%)
Query: 47 ISQGVITREDIFITTKLWI-------TFYSSPDLIRKCLQESLDLLQMDYVNLYLMHWPH 99
+S G + + + T + F L E + D
Sbjct: 11 LSHGSL-EHVLLVPTASFFIASQLQEQFNKI-------LPEPTEGFAAD----------D 52
Query: 100 AFRSGGDLVPFKADGKFDFDDSVDYVDVWKTMECLVDEGLARSIGVSNFNTKQLETLLGV 159
+ +LV GKF + YV LV+ Q + +L
Sbjct: 53 EPTTPAELV-----GKF-----LGYVSS------LVEPS----------KVGQFDQVL-- 84
Query: 160 ARIKPVTN--QARYLFLIEVHPYLTQKKMAAFCRDND-------LVITAY--------SP 202
+ YL ++H A ++ND +I Y P
Sbjct: 85 ---NLCLTEFENCYLEGNDIHALA-----AKLLQENDTTLVKTKELIKNYITARIMAKRP 136
Query: 203 LSNPTNP--FRAKVPFVLEDQTVKDIASRYDKTPAQI---QLGNITVPKSVTKSRLEENR 257
+N FRA + + + +A I Q GN EE R
Sbjct: 137 FDKKSNSALFRA-----VGEGNAQLVA---------IFGGQ-GNTDDY-------FEELR 174
Query: 258 DIFD-----------------FELSQEDMDT----LDGLD------------ANGRTCCV 284
D++ EL + +D GL+ +
Sbjct: 175 DLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSI 234
Query: 285 PGRMVENTMLILLLQLCILTNDHIPSSYLPATEYQVV-----LTPDEQTHYQVGPTGTAE 339
P LI ++QL H Y V TP E Y G TG ++
Sbjct: 235 PISCP----LIGVIQLA-----H----------YVVTAKLLGFTPGELRSYLKGATGHSQ 275
Query: 340 KVCQVYMI---PDEHTHYQVVLTTVTNS------SQENQGSKRQARLQIQIPTQQNKTIP 390
+ I + + V +T E + ++ + N+ +P
Sbjct: 276 GLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVP 335
Query: 391 V-ILS------WALTSFIF-TNSFQPMQATKMAI---NFP--FV-TFNNGLKFPI--FGL 434
+LS + ++ TNS P ++ I N V + G P +GL
Sbjct: 336 SPMLSISNLTQEQVQDYVNKTNSHLP-AGKQVEISLVNGAKNLVVS---G--PPQSLYGL 389
Query: 435 GTW--KSK-KGEVKQA-VGY---AIDIGYR--------HIDCAHVYENEDEVGDAIAQKL 479
K+K + Q+ + + + R H +H+ D I + L
Sbjct: 390 NLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFH---SHLLV---PASDLINKDL 443
Query: 480 KDNVV--KREDLYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLDLYL---IHWPQA 531
N V +D+ I +++TF D L+ ++ +D + + W
Sbjct: 444 VKNNVSFNAKDIQIP--VYDTFDGSD-----LRVLSGSISERIVDCIIRLPVKWETT 493
Score = 48.1 bits (114), Expect = 1e-05
Identities = 76/566 (13%), Positives = 163/566 (28%), Gaps = 193/566 (34%)
Query: 2 YIMF--QSLEREVYEAVCHAIDLGYRHFDCAYYYQNEGQIGEAIQDKISQGVITREDIFI 59
++ + +E ++L F+ Y N+ I ++ + + +
Sbjct: 64 FLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGND------IHALAAKLLQENDTTLV 117
Query: 60 TTKLWI-TFYSSPDLIRKCLQESLD--LLQ---MDYVNLYLMHWPHAFRSGGDLVPFKAD 113
TK I + ++ + ++ + + L + L + F GG
Sbjct: 118 KTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAI-----F--GG-------Q 163
Query: 114 GKFDFDDSVDYVD----VWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTNQA 169
G ++ DY + +++T LV + + S + L L+ T A
Sbjct: 164 G-----NTDDYFEELRDLYQTYHVLVGDLIKFS-------AETLSELI------RTTLDA 205
Query: 170 RYLFL--IEVHPYLTQKKMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFVLEDQTV--KD 225
+F + + +L D D +++ P+S P + Q
Sbjct: 206 EKVFTQGLNILEWLENPSNTP---DKDYLLSI--PIS---------CPLIGVIQLAHYVV 251
Query: 226 IASRYDKTPAQIQ---LGNITVPKSV----------TKSRLEEN-----RDIF------- 260
A TP +++ G + + + + +F
Sbjct: 252 TAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCY 311
Query: 261 ----DFELSQEDM-DTLDGLDANGRTCCVPGRM--VENTMLILLLQLCILTNDHIPSS-- 311
+ L + D+L+ N VP M + N + TN H+P+
Sbjct: 312 EAYPNTSLPPSILEDSLE----NNEG--VPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQ 365
Query: 312 -YL--------------PATEYQVVL--------TPDEQT-----------HYQVGPTGT 337
+ P + Y + L + +Q+ + P +
Sbjct: 366 VEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVAS 425
Query: 338 AEKVCQVYMIPDEHTHYQVVLTTVTNSSQENQGSKRQARLQIQIPTQQNKTIPV------ 391
P H+H L ++ + + + + + IPV
Sbjct: 426 ----------P-FHSHL---LVPASDLINK-----DLVKNNVSFNAKDIQ-IPVYDTFDG 465
Query: 392 ----ILSWALTSFIFTNSFQPMQATKMAINFPFVTFNNGLKFPIFGLG--------TWKS 439
+LS +++ I ++ + + T FG G T ++
Sbjct: 466 SDLRVLSGSISERIV------DCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRN 519
Query: 440 KKG---EVKQA----VGYAIDIGYRH 458
K G V A + D G++
Sbjct: 520 KDGTGVRVIVAGTLDINPDDDYGFKQ 545
Score = 44.7 bits (105), Expect = 1e-04
Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 38/185 (20%)
Query: 597 YVDTWLEMEKLVADGLVKSIGVSNFNSKQIQDILDKGTIKPVVNQVECHPYLTQHKLKQW 656
YV + +E K+ V ++ ++ F + L+ I + ++ T K K+
Sbjct: 67 YVSSLVEPSKVGQFDQVLNLCLTEFEN----CYLEGNDIHALAAKLLQENDTTLVKTKEL 122
Query: 657 CEERQILITAYSPLGSPDRPWAKPGDPSLLDDPKIKEIAAKYNKTSAQILIKYQV--QQG 714
+ + RP+ K + +L A + +AQ+ + QG
Sbjct: 123 IK------NYITARIMAKRPFDKKSNSALFR-------AV--GEGNAQL---VAIFGGQG 164
Query: 715 NI-----------CIPKSVTPSRIEENAQIFDFELAPEDIQTIDSFNRNHRFLLLEWVKD 763
N + I+ +A+ EL + F + +LEW+++
Sbjct: 165 NTDDYFEELRDLYQTYHVLVGDLIKFSAETLS-ELIRTTLDAEKVFTQG--LNILEWLEN 221
Query: 764 HKDYP 768
+ P
Sbjct: 222 PSNTP 226
Score = 40.0 bits (93), Expect = 0.003
Identities = 93/606 (15%), Positives = 163/606 (26%), Gaps = 212/606 (34%)
Query: 163 KPVT---NQARYLFLI--EVHPYLTQKKMAAFCRDNDLVITAYSPLSNPTNPFRAKVPFV 217
+P+T ++ L+ +Q + F L PT F A
Sbjct: 7 RPLTLSHGSLEHVLLVPTASFFIASQLQ-EQF----------NKILPEPTEGFAAD---- 51
Query: 218 LEDQTVKDIASRY-DKTPAQIQLGNITVPKSVTKSRLEENRDIFDFE---LSQEDMDTL- 272
E T ++ ++ + ++ + V L E FE L D+ L
Sbjct: 52 DEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTE------FENCYLEGNDIHALA 105
Query: 273 DGLDANGRTCCVPGRMVENTMLILL--LQLCILTNDHIPSSYLPATEYQVVLTPDEQTHY 330
L T + T ++ + I+ A ++ V + Q
Sbjct: 106 AKLLQENDTT------LVKTKELIKNYITARIMAKRPFDKKSNSAL-FRAVGEGNAQLVA 158
Query: 331 QVGPTGTAEKVCQVYMIPDE----HTHYQVVLTTVTNSSQENQGSKRQARLQ--IQIPTQ 384
G G + Y +E + Y V++ + S E L I+
Sbjct: 159 IFGGQGNTD----DYF--EELRDLYQTYHVLVGDLIKFSAE--------TLSELIRTTLD 204
Query: 385 QNKTIPV---ILSWALT--------SFIFTN--SFQPM-QATKMAINFPFVT-----FNN 425
K IL W L ++ + S P+ ++A ++ VT F
Sbjct: 205 AEKVFTQGLNILEW-LENPSNTPDKDYLLSIPISC-PLIGVIQLA-HY-VVTAKLLGFTP 260
Query: 426 GLKFPIF-GL----------------GTWKSKKGEVKQAVGYAIDIGYRHIDCAHVYENE 468
G G +W+S V++A+ IG R C Y N
Sbjct: 261 GELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVR---CYEAYPNT 317
Query: 469 DEVGDAIAQK-LKDNVVKRED-----LYITSKLWNTFHRPDLVKPALQKTLQNLKLDYLD 522
++ L+D++ E L I+ +L + +Q ++ +
Sbjct: 318 -----SLPPSILEDSLENNEGVPSPMLSIS----------NLTQEQVQD-----YVNKTN 357
Query: 523 LYLIHWPQAYKALQNLKLDYLDLYLIHWPQAYKVSNDFPCAVTREMAFRLSPHIEGDTLF 582
+L Q +L N + VS G
Sbjct: 358 SHLPAGKQVEISLVN------------GAKNLVVS--------------------G---P 382
Query: 583 PADANGKTLYSDANYVDTWLEMEKLVADGLV---------KSIGVSNFNSKQIQDILDKG 633
P LY ++ L K GL K + F L
Sbjct: 383 PQS-----LYG----LNLTLRKAK-APSGLDQSRIPFSERKLKFSNRF--------L--- 421
Query: 634 TIKPVVNQVECH-PYLT--QHKLKQWCEERQILITAYSPLGSP--------D-RPWAKPG 681
PV H L + + + + A + P D R +
Sbjct: 422 ---PVA--SPFHSHLLVPASDLINKDLVKNNVSFNA-KDIQIPVYDTFDGSDLRVLSGSI 475
Query: 682 DPSLLD 687
++D
Sbjct: 476 SERIVD 481
Score = 33.1 bits (75), Expect = 0.43
Identities = 49/339 (14%), Positives = 86/339 (25%), Gaps = 143/339 (42%)
Query: 114 GKFDFDDSVDYV-DVWKTMECLVDEGLARSI-GVSNFNTKQLETLLGVARIKPVTNQARY 171
G D + DVW + + SI + N L G + K + Y
Sbjct: 1632 GM-DLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIR--ENY 1688
Query: 172 LFLIEVHPYLTQKKMAAFCRDNDLVITAY---SP---LSNPTN--P---------FRAKV 214
+I + K ++ + T+Y S LS P F
Sbjct: 1689 SAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFE--- 1745
Query: 215 PFVLEDQTVKD----IA--SRYDKTPAQIQLGNITVPKSVTKSRLEENR------DIFDF 262
L+ + + A S LG E D+
Sbjct: 1746 --DLKSKGLIPADATFAGHS----------LG--------------EYAALASLADVMSI 1779
Query: 263 ELSQEDMDTLD-----GL--------DANGRTC-----CVPGRMVENTMLILLLQLCILT 304
E ++ G+ D GR+ PGR+ +
Sbjct: 1780 E------SLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAA-----------SFS 1822
Query: 305 NDHIPSSYLPATEYQVVLTPDEQTHYQVGPTGTAEKVCQV--YMIPDEHTHYQVV----- 357
+ + VV ++T + ++ Y + ++ Q V
Sbjct: 1823 QEALQ---------YVVERVGKRT----------GWLVEIVNYNVENQ----QYVAAGDL 1859
Query: 358 -----LTTVTNSSQENQGSKRQ----ARLQIQIPTQQNK 387
+T V N K Q LQ + ++ +
Sbjct: 1860 RALDTVTNVLNF------IKLQKIDIIELQKSLSLEEVE 1892
Score = 31.9 bits (72), Expect = 1.1
Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 38/118 (32%)
Query: 567 EMAFRLSPHIEGDTL---FPADANGKTLYS----DANYVDTWLEMEKL--VADGLVKSIG 617
E + G T+ P D G++ Y + V E L V + + K G
Sbjct: 1780 ESLVEVV-FYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTG 1838
Query: 618 ----VSNFNS--KQI------------QDILDKGTIKPV----------VNQVECHPY 647
+ N+N +Q ++L+ ++ + + +VE H +
Sbjct: 1839 WLVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVEGHLF 1896
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 34.5 bits (78), Expect = 0.053
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 9/32 (28%)
Query: 219 EDQTVKDIASR---Y--DKTPAQIQLG-NITV 244
E Q +K + + Y D PA L T+
Sbjct: 18 EKQALKKLQASLKLYADDSAPA---LAIKATM 46
Score = 27.6 bits (60), Expect = 9.5
Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 8/36 (22%)
Query: 367 ENQGSKR-QARLQIQIPTQQNKTIPVILSWALTSFI 401
E Q K+ QA L++ + P + A+ + +
Sbjct: 18 EKQALKKLQASLKLYAD----DSAPAL---AIKATM 46
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating
dehydrogenase; HET: IPM; 1.48A {Shewanella benthica}
PDB: 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A*
3vl3_A*
Length = 375
Score = 33.3 bits (77), Expect = 0.28
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 444 VKQAVGYAIDIGYRHIDCAHVYENE-----DEVGDAIAQKLKDNV 483
++ AV A+ GY + E ++GD IAQ + + V
Sbjct: 331 IEAAVSKALSDGYLTCELLPASERSQAKSTSQMGDYIAQAIAEGV 375
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.1 bits (67), Expect = 2.0
Identities = 9/55 (16%), Positives = 20/55 (36%), Gaps = 12/55 (21%)
Query: 218 LEDQTVKDIASRYDKTPAQIQLGNITVPKSVTKSRLEENRDIFDFELSQEDMDTL 272
++ KD+ + Q++ K+ +R+ + F Q D D +
Sbjct: 112 WREKAKKDLEEWNQRQSEQVE-------KNKINNRIADK----AF-YQQPDADII 154
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase);
oxidoreductase, leucine biosynthetic pathway,
NAD-dependant enzyme; 1.76A {Salmonella typhimurium}
SCOP: c.77.1.1 PDB: 1cm7_A
Length = 363
Score = 30.6 bits (70), Expect = 2.2
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 8/45 (17%)
Query: 444 VKQAVGYAIDIGYRHIDCAHVYENE-----DEVGDAIAQKLKDNV 483
++QA+ A++ G R D + DE+GD IA+ + + V
Sbjct: 322 IEQAINRALEEGVRTGD---LARGAAAVSTDEMGDIIARYVAEGV 363
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing
protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1,
linkers, alternat splicing; HET: GDP; 3.38A {Homo
sapiens} PDB: 3lvr_E*
Length = 497
Score = 30.3 bits (68), Expect = 3.2
Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 17/88 (19%)
Query: 126 DVWKTMECLVDEGLARSIGVSNFNTKQLETLLGVARIKPVTN----------QARY---L 172
D+ E L+ A ++G ++FN L KP A+Y
Sbjct: 69 DLLGPSELLL----ALNMGNTSFNEVMEAQLPSHGGPKPSAESDMGTRRDYIMAKYVEHR 124
Query: 173 FLIEVHPYLTQKKMAAFCRDNDLVITAY 200
F P + A RD V+ A+
Sbjct: 125 FARRCTPEPQRLWTAICNRDLLSVLEAF 152
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB:
2ayq_A 1v53_A 1v5b_A
Length = 390
Score = 29.9 bits (68), Expect = 3.3
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 444 VKQAVGYAIDIGYRHIDCAHVYENE---DEVGDAIAQKLKDNV 483
+++AV + GYR D A E+ D + + D +
Sbjct: 338 IEKAVEKVLAEGYRTADIAKPGGKYVSTTEMTDEVKAAVVDEL 380
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate
and isopropylmalate dehydrogenases family, biosynthesis;
2.25A {Arabidopsis thaliana}
Length = 405
Score = 29.5 bits (67), Expect = 4.0
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 444 VKQAVGYAIDIGYRHIDCAHVYENE---DEVGDAIAQKLKDNV 483
++ AV A++ G+R D E+G+ + + + V
Sbjct: 359 IEDAVLVALNNGFRTGDIYSAGTKLVGCKEMGEEVLKSVDSQV 401
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI,
protein structure initiative, joint center for structu
genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Length = 366
Score = 29.1 bits (66), Expect = 5.7
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 444 VKQAVGYAIDIGYRHIDCAHVYENE---DEVGDAIAQKLKD 481
+++AV I+ GYR D A E ++GD I +KL++
Sbjct: 324 IERAVELVIEEGYRTRDIAEDPEKAVSTSQMGDLICKKLEE 364
>2uvj_A TOGB, ABC type periplasmic sugar-binding protein; periplasmic
binding protein, pectin degradation, trigalacturonic
acid; HET: ADA; 1.8A {Yersinia enterocolitica} PDB:
2uvi_A* 2uvh_A* 2uvg_A 3u1o_A
Length = 408
Score = 29.0 bits (65), Expect = 5.9
Identities = 7/63 (11%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 85 LQMDYVNLYLMHWPHAFRSGGDLVPFKADGKFDFDDSVDYVDVWKTMECLVDEGLARSIG 144
+ +++ + + + + +A+ KF + +V+ + + +VD + S
Sbjct: 162 VVLEHQDTLALIRSYMTQKYNIPTIDEANKKFAYSPE-QWVEFFTMYKTMVDNHVMPSTK 220
Query: 145 VSN 147
Sbjct: 221 YYA 223
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex,
RNA-RNA complex, PROT complex, peptidyl transferase
reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A
{Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F*
1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F*
1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F*
1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Length = 120
Score = 27.9 bits (62), Expect = 5.9
Identities = 4/39 (10%), Positives = 16/39 (41%)
Query: 624 KQIQDILDKGTIKPVVNQVECHPYLTQHKLKQWCEERQI 662
+ +++G+ + V + P + + +E+ +
Sbjct: 35 NETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGV 73
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis,
dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus
subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Length = 349
Score = 28.9 bits (65), Expect = 6.6
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 646 PYLTQHKLKQWCEERQILITAYS 668
P + + + W ER + ++YS
Sbjct: 325 PLVIKGETHHWLTERGVNTSSYS 347
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for
structural genomics of infec diseases, csgid,
oxidoreductase; 1.85A {Campylobacter jejuni} PDB: 3udo_A
Length = 361
Score = 28.7 bits (65), Expect = 7.5
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 444 VKQAVGYAIDIGYRHIDCA-HVYENEDEVGDAIAQKLKDN 482
++ A+ A+ G D Y N DE+GD I + LK+N
Sbjct: 319 IENAISLALAQGKMTKDLNAKSYLNTDEMGDCILEILKEN 358
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase,
decarboxylating dehydrogenase, leucine biosynthesis;
HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP:
c.77.1.1
Length = 358
Score = 28.7 bits (65), Expect = 8.6
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 444 VKQAVGYAIDIGYRHIDCAHVYENE---DEVGDAIAQKLKDN 482
V+ AV +D G R D A +G A+ L
Sbjct: 316 VEAAVQRVLDQGLRTADIAAPGTPVIGTKAMGAAVVNALNLK 357
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.137 0.415
Gapped
Lambda K H
0.267 0.0807 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 11,938,910
Number of extensions: 726682
Number of successful extensions: 2161
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1842
Number of HSP's successfully gapped: 140
Length of query: 773
Length of database: 6,701,793
Length adjustment: 101
Effective length of query: 672
Effective length of database: 3,881,772
Effective search space: 2608550784
Effective search space used: 2608550784
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (27.1 bits)