RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15066
(62 letters)
>d1frba_ c.1.7.1 (A:) FR-1 (fibroblast growth factor-induced)
protein {Mouse (Mus musculus) [TaxId: 10090]}
Length = 315
Score = 63.4 bits (153), Expect = 1e-14
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQRSCVM 59
++R +Q + IPKS T RI ENI VFDF L ++ I + ++ R+C++
Sbjct: 244 SAQVLIRFHIQRNVVVIPKSVTPSRIQENIQVFDFQLSDEEMATILSFNRNWRACLL 300
>d1us0a_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 314
Score = 62.3 bits (150), Expect = 3e-14
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQRSCVMAPY 62
++R +Q + IPKS T +RI EN VFDF L D+ + + ++ R C +
Sbjct: 245 TAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALLSC 304
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 319
Score = 61.9 bits (149), Expect = 4e-14
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQRSCVM 59
LR Q+Q G +P+ +S KRI E VF+F L D+ +D L++ R
Sbjct: 252 PALVALRYQLQRGVVPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLNRNFRYNNA 308
>d1s1pa_ c.1.7.1 (A:) Prostaglandin d2 11-ketoreductase (akr1c3)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 61.9 bits (149), Expect = 5e-14
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQRSC 57
LR Q+Q G + + KS +RI +N+ VF+F L D+ ID LD+
Sbjct: 247 PALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRNLHYF 301
>d1vp5a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Thermotoga maritima [TaxId: 2336]}
Length = 284
Score = 61.5 bits (148), Expect = 6e-14
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQRSCVMAPY 62
+ ILR Q G + IPK+ +R+ ENI++FDF L Q D++KI LD+ Q +
Sbjct: 214 VAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQSAFFSHRD 273
>d1mzra_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 60.3 bits (145), Expect = 1e-13
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQRSC 57
++R + SG + IPKS T RI EN +V+DF L++ ++ +I LD+ +R
Sbjct: 212 PAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLG 266
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis)
[TaxId: 45596]}
Length = 319
Score = 60.4 bits (145), Expect = 2e-13
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQR 55
+LR Q G IPKSN +R+ +N + F L + D ++I LD R
Sbjct: 253 PAEVLLRWAAQRGIAVIPKSNLPERLVQNRSFNTFDLTKEDFEEIAKLDIGLR 305
>d1qwka_ c.1.7.1 (A:) Hypothetical protein C07D8.6 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 312
Score = 59.6 bits (143), Expect = 3e-13
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 8 LRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQR 55
LR + G +PKS RI EN VFDF+L + D+ K++ QR
Sbjct: 246 LRYALDRGCAILPKSIQENRIKENFEVFDFSLTEEDIAKLEESKNSQR 293
>d1hqta_ c.1.7.1 (A:) Aldose reductase (aldehyde reductase) {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 324
Score = 59.6 bits (143), Expect = 3e-13
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 12 VQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQR 55
VQ I IPKS T RI +NI VFDFT ++ ++DAL+K R
Sbjct: 253 VQRKVICIPKSVTPSRIPQNIQVFDFTFSPEEMKQLDALNKNLR 296
>d1hw6a_ c.1.7.1 (A:) 2,5-diketo-D-gluconic acid reductase A
{Corynebacterium sp. [TaxId: 1720]}
Length = 262
Score = 55.4 bits (132), Expect = 7e-12
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 3 MTSFILRPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALD 51
+LR +Q G + PKS +R+ EN++VFDF L +++ IDA+D
Sbjct: 213 PAQAVLRWHLQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMD 261
>d1pz1a_ c.1.7.1 (A:) Putative oxidoreductase YhdN {Bacillus
subtilis [TaxId: 1423]}
Length = 333
Score = 49.7 bits (117), Expect = 1e-09
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 6 FIL-RPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQRSCVMAP 61
+IL +P I + + ++ + +TL D I+ + + S + P
Sbjct: 267 WILDQPGA---DIALWGARKPGQLEALSEITGWTLNSEDQKDINTILENTISDPVGP 320
>d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]}
Length = 346
Score = 49.5 bits (117), Expect = 1e-09
Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 6 FIL-RPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQR 55
F+ +P V + + T+ ++ NI L + + +I+A+ +
Sbjct: 295 FVRRQPFV---ASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYT 342
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus
subtilis [TaxId: 1423]}
Length = 311
Score = 48.8 bits (115), Expect = 2e-09
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 6 FIL-RPQVQSGTIPIPKSNTVKRITENINVFDFTLEQSDVDKIDAL 50
+ L RP++ I IP + ++ +NI D TL Q D+ ID L
Sbjct: 265 WYLARPEI---DILIPGAKRADQLIDNIKTADVTLSQEDISFIDKL 307
>d1ur3m_ c.1.7.1 (M:) Hypothetical oxidoreductase YdhF {Escherichia
coli [TaxId: 562]}
Length = 298
Score = 46.6 bits (109), Expect = 1e-08
Identities = 5/40 (12%), Positives = 13/40 (32%)
Query: 16 TIPIPKSNTVKRITENINVFDFTLEQSDVDKIDALDKKQR 55
+PI S ++R+ + + + +I
Sbjct: 257 PLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYD 296
>d3eaua1 c.1.7.1 (A:36-361) Voltage-dependent K+ channel beta
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 326
Score = 41.2 bits (95), Expect = 1e-06
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 12/60 (20%)
Query: 6 FIL-RPQVQSGTIPIPKSNTVKRITENINVFDF--TLEQSDVDKIDALDKKQRSCVMAPY 62
+ L V + + ++ +++ ENI L S V +ID++ + PY
Sbjct: 275 WCLRNEGV---SSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNK------PY 325
>d1gvea_ c.1.7.1 (A:) Aflatoxin aldehyde reductase (akr7a1) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 324
Score = 39.7 bits (91), Expect = 4e-06
Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 9 RPQVQS--GTIPIPKSNTVKRITENINVFD-FTLEQSDVDKIDALDKK 53
Q++ G I ++++++ +N+ + + LE + VD D
Sbjct: 267 HSQLKGTQGDAVILGMSSLEQLEQNLALVEEGPLEPAVVDAFDQAWNL 314
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS)
{Staphylococcus aureus [TaxId: 1280]}
Length = 273
Score = 23.4 bits (49), Expect = 2.1
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 23 NTVKRITENINVFDFTLEQSDVDKIDALDK 52
NT++ + NIN F+ + ++ +D+
Sbjct: 6 NTLRFMLGNINDFNPDTDSIPESELLEVDR 35
>d1oqka_ b.137.1.1 (A:) Hypothetical protein MTH11 {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 78
Score = 22.0 bits (47), Expect = 5.0
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 21 KSNTVKRITENINVFDFTLEQSDVDKID 48
+ + I VF F Q ++ +ID
Sbjct: 39 DDGREITVPKGIAVFHFRTPQGELVEID 66
>d1gppa_ b.86.1.2 (A:) VMA1-derived endonuclease (VDE) PI-Scei
intein {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 229
Score = 22.2 bits (47), Expect = 6.8
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 29 TENINVFDFTLEQSDVDKIDA 49
N F++T+E D+ + +
Sbjct: 151 ASNKAYFEWTIEARDLSLLGS 171
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus
thermophilus, strain hb27 [TaxId: 274]}
Length = 110
Score = 21.8 bits (46), Expect = 7.1
Identities = 8/36 (22%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 25 VKRITENINVFDFTLEQ----SDVDKIDALDKKQRS 56
+KR+ + VF + + D++ + ALD++ +
Sbjct: 4 LKRLRQEPEVFHRAIREKGVALDLEALLALDREVQE 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.134 0.380
Gapped
Lambda K H
0.267 0.0421 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 211,725
Number of extensions: 7102
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 21
Length of query: 62
Length of database: 2,407,596
Length adjustment: 32
Effective length of query: 30
Effective length of database: 1,968,236
Effective search space: 59047080
Effective search space used: 59047080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)