Your job contains 1 sequence.
>psy15067
LLQGEILAPRPPDHDETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY
VYFFKIFHPIPYYTTEAGTY
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15067
(80 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G3V2D5 - symbol:ZFP36L1 "Zinc finger protein 36... 181 4.9e-14 1
UNIPROTKB|G3V2P5 - symbol:ZFP36L1 "Zinc finger protein 36... 181 4.9e-14 1
UNIPROTKB|A4IIN5 - symbol:zfp36l2 "Zinc finger protein 36... 181 1.3e-13 1
UNIPROTKB|A7MB98 - symbol:ZFP36L1 "Uncharacterized protei... 181 1.3e-13 1
UNIPROTKB|E2R2W0 - symbol:ZFP36L1 "Uncharacterized protei... 181 1.3e-13 1
UNIPROTKB|Q07352 - symbol:ZFP36L1 "Zinc finger protein 36... 181 1.3e-13 1
UNIPROTKB|I3LB77 - symbol:ZFP36L1 "Uncharacterized protei... 181 1.3e-13 1
MGI|MGI:107946 - symbol:Zfp36l1 "zinc finger protein 36, ... 181 1.3e-13 1
RGD|62009 - symbol:Zfp36l1 "zinc finger protein 36, C3H t... 181 1.3e-13 1
UNIPROTKB|P17431 - symbol:Zfp36l1 "Zinc finger protein 36... 181 1.3e-13 1
UNIPROTKB|Q7ZXW9 - symbol:zfp36l2-A "Zinc finger protein ... 181 1.7e-13 1
MGI|MGI:107945 - symbol:Zfp36l2 "zinc finger protein 36, ... 181 1.8e-13 1
ZFIN|ZDB-GENE-030131-9860 - symbol:zfp36l1a "zinc finger ... 181 1.9e-13 1
UNIPROTKB|Q805B4 - symbol:zfp36l2-B "Zinc finger protein ... 180 2.2e-13 1
UNIPROTKB|F1MV20 - symbol:F1MV20 "Uncharacterized protein... 181 2.8e-13 1
ZFIN|ZDB-GENE-030131-2391 - symbol:zfp36l1b "zinc finger ... 178 3.2e-13 1
RGD|1308913 - symbol:Zfp36l2 "zinc finger protein 36, C3H... 181 3.4e-13 1
UNIPROTKB|J9NWC9 - symbol:ZFP36L2 "Uncharacterized protei... 181 3.6e-13 1
UNIPROTKB|F1S5I0 - symbol:ZFP36L2 "Uncharacterized protei... 181 3.6e-13 1
UNIPROTKB|P47974 - symbol:ZFP36L2 "Zinc finger protein 36... 181 3.6e-13 1
FB|FBgn0011837 - symbol:Tis11 "Tis11 homolog" species:722... 176 9.7e-13 1
ZFIN|ZDB-GENE-030131-5873 - symbol:zfp36l2 "zinc finger p... 170 3.0e-12 1
UNIPROTKB|F1LVT2 - symbol:F1LVT2 "Uncharacterized protein... 171 4.3e-12 1
RGD|1559581 - symbol:Zfp36l3 "zinc finger protein 36, C3H... 171 8.2e-12 1
ZFIN|ZDB-GENE-990806-20 - symbol:cth1 "cth1" species:7955... 164 8.9e-12 1
UNIPROTKB|J9NTC7 - symbol:ZFP36 "Uncharacterized protein"... 148 1.7e-11 2
WB|WBGene00009532 - symbol:ccch-1 species:6239 "Caenorhab... 164 2.2e-11 1
ZFIN|ZDB-GENE-050913-48 - symbol:zgc:114130 "zgc:114130" ... 162 2.6e-11 1
ZFIN|ZDB-GENE-030131-6366 - symbol:zgc:162730 "zgc:162730... 158 4.8e-11 1
DICTYBASE|DDB_G0285973 - symbol:DDB_G0285973 "Butyrate re... 158 8.9e-11 1
MGI|MGI:99180 - symbol:Zfp36 "zinc finger protein 36" spe... 148 5.4e-10 1
RGD|620722 - symbol:Zfp36 "zinc finger protein 36" specie... 148 5.5e-10 1
UNIPROTKB|P47973 - symbol:Zfp36 "Tristetraprolin" species... 148 5.5e-10 1
UNIPROTKB|E2RKS9 - symbol:ZFP36 "Uncharacterized protein"... 148 5.6e-10 1
UNIPROTKB|G3MWV8 - symbol:ZFP36 "Tristetraprolin" species... 147 7.3e-10 1
UNIPROTKB|P53781 - symbol:ZFP36 "Tristetraprolin" species... 147 7.3e-10 1
UNIPROTKB|Q0VCR3 - symbol:ZFP36 "Tristetraprolin" species... 147 7.3e-10 1
UNIPROTKB|D0VE66 - symbol:LOC100623625 "Tristetraprolin" ... 147 7.4e-10 1
UNIPROTKB|P26651 - symbol:ZFP36 "Tristetraprolin" species... 146 9.6e-10 1
UNIPROTKB|Q6S9E0 - symbol:ZFP36 "Tristetraprolin" species... 145 1.2e-09 1
POMBASE|SPBC1718.07c - symbol:zfs1 "CCCH tandem zinc fing... 146 1.5e-09 1
TAIR|locus:2033384 - symbol:AT1G66810 species:3702 "Arabi... 141 3.0e-09 1
TAIR|locus:2199352 - symbol:AT1G68200 species:3702 "Arabi... 137 8.2e-09 1
WB|WBGene00003228 - symbol:mex-1 species:6239 "Caenorhabd... 126 3.2e-07 1
WB|WBGene00004078 - symbol:pos-1 species:6239 "Caenorhabd... 121 3.3e-07 1
CGD|CAL0004295 - symbol:orf19.5334 species:5476 "Candida ... 116 5.1e-07 1
SGD|S000002558 - symbol:CTH1 "Member of the CCCH zinc fin... 121 5.3e-07 1
WB|WBGene00013794 - symbol:dct-13 species:6239 "Caenorhab... 115 7.1e-07 1
WB|WBGene00003864 - symbol:oma-1 species:6239 "Caenorhabd... 121 8.1e-07 1
UNIPROTKB|G5EC86 - symbol:oma-1 "Protein OMA-1" species:6... 121 8.1e-07 1
WB|WBGene00003865 - symbol:oma-2 species:6239 "Caenorhabd... 119 1.3e-06 1
WB|WBGene00013797 - symbol:Y116A8C.20 species:6239 "Caeno... 112 1.5e-06 1
WB|WBGene00003230 - symbol:mex-5 species:6239 "Caenorhabd... 118 2.1e-06 1
WB|WBGene00003231 - symbol:mex-6 species:6239 "Caenorhabd... 117 2.7e-06 1
WB|WBGene00003388 - symbol:moe-3 species:6239 "Caenorhabd... 115 3.0e-06 1
WB|WBGene00009537 - symbol:ccch-2 species:6239 "Caenorhab... 107 4.1e-06 1
SGD|S000004126 - symbol:TIS11 "mRNA-binding protein expre... 111 5.1e-06 1
UNIPROTKB|F1LVN6 - symbol:F1LVN6 "Uncharacterized protein... 110 7.9e-06 1
WB|WBGene00013796 - symbol:Y116A8C.19 species:6239 "Caeno... 104 1.2e-05 1
WB|WBGene00007961 - symbol:C35D6.4 species:6239 "Caenorha... 104 1.3e-05 1
WB|WBGene00009539 - symbol:F38C2.7 species:6239 "Caenorha... 104 1.3e-05 1
WB|WBGene00013370 - symbol:Y60A9.3 species:6239 "Caenorha... 103 1.7e-05 1
TAIR|locus:2062476 - symbol:AT2G35430 species:3702 "Arabi... 61 6.2e-05 2
WB|WBGene00013319 - symbol:ccch-5 species:6239 "Caenorhab... 96 0.00010 1
>UNIPROTKB|G3V2D5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006417 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0000288 HGNC:HGNC:1107
ChiTaRS:ZFP36L1 InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2D5 SMR:G3V2D5 Ensembl:ENST00000557022
ArrayExpress:G3V2D5 Bgee:G3V2D5 Uniprot:G3V2D5
Length = 176
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 102 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 147
>UNIPROTKB|G3V2P5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 HGNC:HGNC:1107 ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2P5 SMR:G3V2P5 Ensembl:ENST00000557086
ArrayExpress:G3V2P5 Bgee:G3V2P5 Uniprot:G3V2P5
Length = 207
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 130 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 175
>UNIPROTKB|A4IIN5 [details] [associations]
symbol:zfp36l2 "Zinc finger protein 36, C3H1 type-like 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043488
"regulation of mRNA stability" evidence=ISS] [GO:0048793
"pronephros development" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GO:GO:0048793 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 CTD:678 EMBL:BC136091
RefSeq:NP_001096423.1 UniGene:Str.6563 STRING:A4IIN5
GeneID:100125029 KEGG:xtr:100125029 Xenbase:XB-GENE-971012
Uniprot:A4IIN5
Length = 333
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 111 EESGACKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 156
>UNIPROTKB|A7MB98 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GeneTree:ENSGT00530000063262 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:DAAA02029486 EMBL:BC151440 IPI:IPI00709262
RefSeq:NP_001094704.1 UniGene:Bt.61758 SMR:A7MB98 STRING:A7MB98
Ensembl:ENSBTAT00000035742 GeneID:614773 KEGG:bta:614773
InParanoid:A7MB98 NextBio:20899277 Uniprot:A7MB98
Length = 338
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 124 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 169
>UNIPROTKB|E2R2W0 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:AAEX03005803
RefSeq:XP_853070.1 Ensembl:ENSCAFT00000026141 GeneID:490748
KEGG:cfa:490748 NextBio:20863709 Uniprot:E2R2W0
Length = 338
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 124 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 169
>UNIPROTKB|Q07352 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0043488 "regulation of
mRNA stability" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005829 GO:GO:0005634 GO:GO:0010467 GO:GO:0016071
GO:GO:0006417 PDB:1W0V PDB:1W0W PDBsum:1W0V PDBsum:1W0W
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0003700 GO:GO:0017091 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CleanEx:HS_BRF1
EMBL:X79066 EMBL:X79067 EMBL:X99404 EMBL:BT019468 EMBL:BC018340
IPI:IPI00016635 PIR:S34854 RefSeq:NP_001231627.1
RefSeq:NP_001231630.1 RefSeq:NP_004917.2 UniGene:Hs.85155
ProteinModelPortal:Q07352 SMR:Q07352 IntAct:Q07352
MINT:MINT-1375566 STRING:Q07352 PhosphoSite:Q07352 DMDM:1351254
PaxDb:Q07352 PeptideAtlas:Q07352 PRIDE:Q07352 DNASU:677
Ensembl:ENST00000336440 Ensembl:ENST00000439696 GeneID:677
KEGG:hsa:677 UCSC:uc001xkh.2 CTD:677 GeneCards:GC14M069254
HGNC:HGNC:1107 HPA:HPA001301 MIM:601064 neXtProt:NX_Q07352
PharmGKB:PA35027 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InParanoid:Q07352 OMA:HSYSFAG OrthoDB:EOG480HXD PhylomeDB:Q07352
ChiTaRS:ZFP36L1 EvolutionaryTrace:Q07352 GenomeRNAi:677
NextBio:2790 ArrayExpress:Q07352 Bgee:Q07352 CleanEx:HS_ZFP36L1
Genevestigator:Q07352 GermOnline:ENSG00000185650 InterPro:IPR007635
Pfam:PF04553 Uniprot:Q07352
Length = 338
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 124 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 169
>UNIPROTKB|I3LB77 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:CT956041
RefSeq:XP_003356787.1 Ensembl:ENSSSCT00000022695 GeneID:100624279
KEGG:ssc:100624279 Uniprot:I3LB77
Length = 338
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 124 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 169
>MGI|MGI:107946 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=ISO] [GO:0033077 "T cell differentiation
in thymus" evidence=IGI] [GO:0043488 "regulation of mRNA stability"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:107946 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:M58566 IPI:IPI00138335
PIR:B39590 RefSeq:NP_031590.1 UniGene:Mm.235132
ProteinModelPortal:P23950 SMR:P23950 STRING:P23950
PhosphoSite:P23950 PRIDE:P23950 Ensembl:ENSMUST00000021552
Ensembl:ENSMUST00000165114 GeneID:12192 KEGG:mmu:12192
InParanoid:P23950 NextBio:280591 Bgee:P23950 CleanEx:MM_ZFP36L1
Genevestigator:P23950 GermOnline:ENSMUSG00000021127 Uniprot:P23950
Length = 338
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 124 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 169
>RGD|62009 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IMP]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA;ISO]
[GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0006402 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553
EMBL:X52590 EMBL:X86571 IPI:IPI00188182 PIR:S10471
RefSeq:NP_058868.1 UniGene:Rn.6142 ProteinModelPortal:P17431
SMR:P17431 MINT:MINT-1210346 STRING:P17431 PhosphoSite:P17431
GeneID:29344 KEGG:rno:29344 UCSC:RGD:62009 InParanoid:P17431
NextBio:608836 ArrayExpress:P17431 Genevestigator:P17431
GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 124 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 169
>UNIPROTKB|P17431 [details] [associations]
symbol:Zfp36l1 "Zinc finger protein 36, C3H1 type-like 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0006402
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CTD:677
HOGENOM:HOG000233479 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 EMBL:X52590 EMBL:X86571
IPI:IPI00188182 PIR:S10471 RefSeq:NP_058868.1 UniGene:Rn.6142
ProteinModelPortal:P17431 SMR:P17431 MINT:MINT-1210346
STRING:P17431 PhosphoSite:P17431 GeneID:29344 KEGG:rno:29344
UCSC:RGD:62009 InParanoid:P17431 NextBio:608836 ArrayExpress:P17431
Genevestigator:P17431 GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 181 (68.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 124 EENGACKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCPY 169
>UNIPROTKB|Q7ZXW9 [details] [associations]
symbol:zfp36l2-A "Zinc finger protein 36, C3H1 type-like
2-A" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0048793 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:BC044086 EMBL:AF061982
RefSeq:NP_001080610.1 UniGene:Xl.23743 UniGene:Xl.476
ProteinModelPortal:Q7ZXW9 SMR:Q7ZXW9 GeneID:380302 KEGG:xla:380302
CTD:380302 Xenbase:XB-GENE-6256550 Uniprot:Q7ZXW9
Length = 363
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 141 EESGACKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 186
>MGI|MGI:107945 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IGI]
[GO:0043488 "regulation of mRNA stability" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:107945
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0033077 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 ChiTaRS:ZFP36L2 EMBL:M58564
EMBL:M97165 IPI:IPI00138319 PIR:C39590 UniGene:Mm.259321
ProteinModelPortal:P23949 SMR:P23949 STRING:P23949
PhosphoSite:P23949 PaxDb:P23949 PRIDE:P23949 InParanoid:P23949
CleanEx:MM_ZFP36L2 Genevestigator:P23949
GermOnline:ENSMUSG00000045817 Uniprot:P23949
Length = 367
Score = 181 (68.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 136 EESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 181
>ZFIN|ZDB-GENE-030131-9860 [details] [associations]
symbol:zfp36l1a "zinc finger protein 36, C3H
type-like 1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-9860 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 HOGENOM:HOG000233479 HOVERGEN:HBG008483
OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553 EMBL:BC124505
IPI:IPI00482112 RefSeq:NP_001070621.1 UniGene:Dr.105582
UniGene:Dr.107563 UniGene:Dr.31482 UniGene:Dr.76498
ProteinModelPortal:Q08BY3 SMR:Q08BY3 GeneID:561280 KEGG:dre:561280
CTD:561280 InParanoid:Q08BY3 NextBio:20883849 Uniprot:Q08BY3
Length = 374
Score = 181 (68.8 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 154 EENGACKYGDKCQFAHGIHELRSLSRHPKYKTELCRTFHTIGFCPY 199
>UNIPROTKB|Q805B4 [details] [associations]
symbol:zfp36l2-B "Zinc finger protein 36, C3H1 type-like
2-B" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0039020 "pronephric nephron tubule
development" evidence=IMP] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=IMP] [GO:0072080 "nephron tubule development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0039020 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:AF061982 UniGene:Xl.476
EMBL:AB097482 EMBL:BC084221 RefSeq:NP_001081886.1
ProteinModelPortal:Q805B4 SMR:Q805B4 GeneID:398103 KEGG:xla:398103
CTD:398103 Xenbase:XB-GENE-971016 Uniprot:Q805B4
Length = 364
Score = 180 (68.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 143 EENGACKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 188
>UNIPROTKB|F1MV20 [details] [associations]
symbol:F1MV20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:DAAA02030674 IPI:IPI00695139
Ensembl:ENSBTAT00000004621 Uniprot:F1MV20
Length = 438
Score = 181 (68.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 159 EESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 204
>ZFIN|ZDB-GENE-030131-2391 [details] [associations]
symbol:zfp36l1b "zinc finger protein 36, C3H
type-like 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-2391 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 HOGENOM:HOG000233479
HOVERGEN:HBG008483 InterPro:IPR007635 Pfam:PF04553 EMBL:BX649319
EMBL:BC063991 IPI:IPI00481341 RefSeq:NP_955943.1 UniGene:Dr.78307
SMR:Q6P3H0 Ensembl:ENSDART00000014168 GeneID:323671 KEGG:dre:323671
CTD:323671 InParanoid:Q6P3H0 OMA:SSITCIS NextBio:20808378
Uniprot:Q6P3H0
Length = 348
Score = 178 (67.7 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+LC+++H G+CPY
Sbjct: 147 EENGTCKYGDKCQFAHGMHELRSLNRHPKYKTELCRTFHSIGYCPY 192
>RGD|1308913 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=ISO]
[GO:0043488 "regulation of mRNA stability" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:1308913 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 CTD:678 OMA:PLAIQTH IPI:IPI00553840
RefSeq:NP_001031703.1 Ensembl:ENSRNOT00000006725 GeneID:298765
KEGG:rno:298765 UCSC:RGD:1308913 Uniprot:D3ZHK9
Length = 482
Score = 181 (68.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 161 EESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 206
>UNIPROTKB|J9NWC9 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00530000063262
InterPro:IPR007635 Pfam:PF04553 OMA:PLAIQTH EMBL:AAEX03007468
RefSeq:XP_003639394.1 Ensembl:ENSCAFT00000048010 GeneID:100856710
KEGG:cfa:100856710 Uniprot:J9NWC9
Length = 491
Score = 181 (68.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 167 EESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 212
>UNIPROTKB|F1S5I0 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:CU694628 RefSeq:XP_003125238.1
Ensembl:ENSSSCT00000009263 GeneID:100513591 KEGG:ssc:100513591
ArrayExpress:F1S5I0 Uniprot:F1S5I0
Length = 493
Score = 181 (68.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 163 EESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 208
>UNIPROTKB|P47974 [details] [associations]
symbol:ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488 "regulation of
mRNA stability" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0005737
EMBL:CH471053 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 CleanEx:HS_BRF2 eggNOG:COG5063 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:U07802 EMBL:X78992 EMBL:AC010883 EMBL:BC005010
IPI:IPI00604786 PIR:S49147 RefSeq:NP_008818.3 UniGene:Hs.503093
UniGene:Hs.705738 PDB:1RGO PDBsum:1RGO ProteinModelPortal:P47974
SMR:P47974 IntAct:P47974 STRING:P47974 PhosphoSite:P47974
DMDM:146291085 PRIDE:P47974 DNASU:678 Ensembl:ENST00000282388
GeneID:678 KEGG:hsa:678 UCSC:uc002rsv.4 CTD:678
GeneCards:GC02M043449 HGNC:HGNC:1108 HPA:HPA047428 MIM:612053
neXtProt:NX_P47974 PharmGKB:PA35028 InParanoid:P47974 OMA:PLAIQTH
PhylomeDB:P47974 ChiTaRS:ZFP36L2 EvolutionaryTrace:P47974
GenomeRNAi:678 NextBio:2794 Bgee:P47974 CleanEx:HS_ZFP36L2
Genevestigator:P47974 GermOnline:ENSG00000152518 Uniprot:P47974
Length = 494
Score = 181 (68.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E+G CK+G C+FAHG HELR + RHP+Y+T+LC+++H GFCPY
Sbjct: 163 EESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPY 208
>FB|FBgn0011837 [details] [associations]
symbol:Tis11 "Tis11 homolog" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0016246 GO:GO:0046872 GO:GO:0003677 EMBL:AE014298
GO:GO:0008270 GO:GO:0003730 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:U13397 EMBL:X81194
RefSeq:NP_511141.2 RefSeq:NP_727633.1 UniGene:Dm.4329
ProteinModelPortal:P47980 SMR:P47980 MINT:MINT-914241 STRING:P47980
PaxDb:P47980 EnsemblMetazoa:FBtr0073683 EnsemblMetazoa:FBtr0333756
GeneID:32222 KEGG:dme:Dmel_CG4070 CTD:32222 FlyBase:FBgn0011837
InParanoid:P47980 OMA:MNTSRYK OrthoDB:EOG47WM4T PhylomeDB:P47980
GenomeRNAi:32222 NextBio:777464 Bgee:P47980 Uniprot:P47980
Length = 436
Score = 176 (67.0 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG+HELR + RHP+Y+T+ C+++H GFCPY
Sbjct: 145 EEAGECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGFCPY 190
>ZFIN|ZDB-GENE-030131-5873 [details] [associations]
symbol:zfp36l2 "zinc finger protein 36, C3H
type-like 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-5873 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
EMBL:CR932077 IPI:IPI00508201 Ensembl:ENSDART00000142674
ArrayExpress:F1QU82 Bgee:F1QU82 Uniprot:F1QU82
Length = 373
Score = 170 (64.9 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G CK+G C+FAHG HELR + RHP+Y+T+ C+++H GFCPY
Sbjct: 127 EENGSCKYGEKCQFAHGYHELRNLSRHPKYKTEPCRTFHTIGFCPY 172
>UNIPROTKB|F1LVT2 [details] [associations]
symbol:F1LVT2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005737 GO:GO:0008270 GO:GO:0017091 GO:GO:0000289
GeneTree:ENSGT00530000063262 IPI:IPI00362311
Ensembl:ENSRNOT00000050601 Uniprot:F1LVT2
Length = 490
Score = 171 (65.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G C++G C+FAHG HELR + RHP+Y+T+ C+++H G+CPY
Sbjct: 151 EENGTCRYGNKCQFAHGYHELRTLSRHPKYKTEPCRTFHSIGYCPY 196
>RGD|1559581 [details] [associations]
symbol:Zfp36l3 "zinc finger protein 36, C3H type-like 3"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0017091 "AU-rich element
binding" evidence=ISO] REFSEQ:XM_001053657 Ncbi:XP_001053657
Length = 722
Score = 171 (65.3 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 15 DETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+E G C++G C+FAHG HELR + RHP+Y+T+ C+++H G+CPY
Sbjct: 131 EENGTCRYGNKCQFAHGYHELRTLSRHPKYKTEPCRTFHSIGYCPY 176
>ZFIN|ZDB-GENE-990806-20 [details] [associations]
symbol:cth1 "cth1" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 ZFIN:ZDB-GENE-990806-20 GO:GO:0008270
GO:GO:0003676 HSSP:P22893 GeneTree:ENSGT00530000063262
EMBL:AL954709 EMBL:BC107984 EMBL:AJ249490 IPI:IPI00509714
RefSeq:NP_571014.1 UniGene:Dr.621 SMR:Q9PU62 STRING:Q9PU62
Ensembl:ENSDART00000101601 GeneID:30114 KEGG:dre:30114 CTD:30114
HOGENOM:HOG000153347 HOVERGEN:HBG078993 InParanoid:Q9PU62 KO:K13056
OMA:FTFSSQH NextBio:20806593 Uniprot:Q9PU62
Length = 319
Score = 164 (62.8 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
ETG CK+ C+FAHG H+L V RHP+Y+T+LC++YH G+C Y
Sbjct: 70 ETGTCKYAERCQFAHGLHDLHVPSRHPKYKTELCRTYHTAGYCVY 114
>UNIPROTKB|J9NTC7 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063262 EMBL:AAEX03000957
Ensembl:ENSCAFT00000042970 Uniprot:J9NTC7
Length = 294
Score = 148 (57.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+TK+C ++ G CPY
Sbjct: 117 ESGRCRYGAKCQFAHGLGELRQASRHPKYKTKVCHKFYLQGGCPY 161
Score = 30 (15.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 4/5 (80%), Positives = 5/5 (100%)
Query: 67 FHPIP 71
FHP+P
Sbjct: 231 FHPLP 235
>WB|WBGene00009532 [details] [associations]
symbol:ccch-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016529 "sarcoplasmic reticulum"
evidence=IDA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0016529 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z74033 PIR:T21954
RefSeq:NP_505926.2 ProteinModelPortal:Q20155 SMR:Q20155
PaxDb:Q20155 EnsemblMetazoa:F38B7.1a GeneID:179584
KEGG:cel:CELE_F38B7.1 UCSC:F38B7.1a CTD:179584 WormBase:F38B7.1a
HOGENOM:HOG000022515 InParanoid:Q20155 OMA:PCSSNDS NextBio:906034
ArrayExpress:Q20155 Uniprot:Q20155
Length = 460
Score = 164 (62.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 13 DHDETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
DH G C +G C++AHG E R +PRHP+Y+T+ CQS+HQ G+CPY
Sbjct: 209 DH---GRCNYGERCQYAHGELEKRPVPRHPKYKTEACQSFHQSGYCPY 253
>ZFIN|ZDB-GENE-050913-48 [details] [associations]
symbol:zgc:114130 "zgc:114130" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-050913-48 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:BX927244 IPI:IPI00610779
Ensembl:ENSDART00000124803 Ensembl:ENSDART00000139068
Uniprot:F1QH59
Length = 394
Score = 162 (62.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E G+CK+G C+FAHG ELR + RHP+Y+T+ C+++H GFCPY
Sbjct: 151 ERGLCKYGGKCQFAHGPEELRDLNRHPKYKTEPCRTFHSIGFCPY 195
>ZFIN|ZDB-GENE-030131-6366 [details] [associations]
symbol:zgc:162730 "zgc:162730" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-6366 GO:GO:0008270 GO:GO:0003676
HOGENOM:HOG000233479 EMBL:BC139894 IPI:IPI00933596
UniGene:Dr.106159 STRING:A5D6V0 HOVERGEN:HBG105016
InParanoid:A5D6V0 OrthoDB:EOG4PK294 ArrayExpress:A5D6V0
Uniprot:A5D6V0
Length = 336
Score = 158 (60.7 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E G CK+G C+FAHG +ELR + RHP+Y+T+ C++++Q G+CPY
Sbjct: 123 EHGSCKYGAKCQFAHGENELRGLYRHPKYKTQACRTFYQFGYCPY 167
>DICTYBASE|DDB_G0285973 [details] [associations]
symbol:DDB_G0285973 "Butyrate response factor 2"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 dictyBase:DDB_G0285973 GO:GO:0008270 GO:GO:0003676
EMBL:AAFI02000082 eggNOG:COG5063 RefSeq:XP_637949.2
ProteinModelPortal:Q54MG5 SMR:Q54MG5 EnsemblProtists:DDB0218764
GeneID:8625376 KEGG:ddi:DDB_G0285973 InParanoid:Q54MG5 OMA:WSSDEAS
Uniprot:Q54MG5
Length = 437
Score = 158 (60.7 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
ETGVC++G C+FAHG ELR + RHP+Y+T+ C++++ G CPY
Sbjct: 206 ETGVCRYGLKCQFAHGRDELRSVMRHPKYKTETCKTFYSIGSCPY 250
>MGI|MGI:99180 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IMP] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IDA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006950 "response to stress" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=ISO] [GO:0017091 "AU-rich
element binding" evidence=ISO;IDA] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0019957 "C-C chemokine binding"
evidence=ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
binding" evidence=IDA] [GO:0043488 "regulation of mRNA stability"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IMP] [GO:0050779 "RNA destabilization"
evidence=IMP] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
[GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:99180 GO:GO:0005829 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0008270
GO:GO:0007243 GO:GO:0000122 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0035925 GO:GO:0050779
HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538 KO:K15308
OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:M57422 EMBL:M58691 EMBL:X14678
EMBL:M58565 EMBL:L42317 EMBL:BC021391 IPI:IPI00132695 PIR:A36600
PIR:S04743 RefSeq:NP_035886.1 UniGene:Mm.389856 PDB:1M9O
PDBsum:1M9O ProteinModelPortal:P22893 SMR:P22893 IntAct:P22893
MINT:MINT-225240 STRING:P22893 PhosphoSite:P22893 PRIDE:P22893
Ensembl:ENSMUST00000051241 GeneID:22695 KEGG:mmu:22695
InParanoid:P22893 EvolutionaryTrace:P22893 NextBio:303151
Bgee:P22893 CleanEx:MM_ZFP36 Genevestigator:P22893
GermOnline:ENSMUSG00000044786 Uniprot:P22893
Length = 319
Score = 148 (57.2 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 14 HDETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+ E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 104 YSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPY 150
>RGD|620722 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO;ISS] [GO:0006950 "response to stress"
evidence=IEA;ISO;ISS] [GO:0007243 "intracellular protein kinase
cascade" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA;ISO;ISS] [GO:0017091 "AU-rich element binding"
evidence=ISO;ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0019957 "C-C chemokine binding"
evidence=IEA;ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA;ISO;ISS] [GO:0035925 "mRNA 3'-UTR AU-rich
region binding" evidence=IEA;ISO] [GO:0043488 "regulation of mRNA
stability" evidence=ISO] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0050779 "RNA destabilization"
evidence=IEA;ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO;ISS] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA;ISO;ISS] [GO:0071889 "14-3-3 protein
binding" evidence=IEA;ISO;ISS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 RGD:620722 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0006402
GO:GO:0071889 GO:GO:0010494 GO:GO:0060213 eggNOG:COG5063
GO:GO:0000289 GO:GO:0045638 GO:GO:0070935 GO:GO:0032680
GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:X63369 EMBL:AB025017
EMBL:BC060308 IPI:IPI00192126 PIR:JC1255 RefSeq:NP_579824.2
UniGene:Rn.82737 ProteinModelPortal:P47973 SMR:P47973 STRING:P47973
PhosphoSite:P47973 PRIDE:P47973 GeneID:79426 KEGG:rno:79426
UCSC:RGD:620722 InParanoid:P47973 NextBio:614778
Genevestigator:P47973 GermOnline:ENSRNOG00000019673 Uniprot:P47973
Length = 320
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 14 HDETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+ E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 105 YSESGRCRYGAKCQFAHGPGELRQANRHPKYKTELCHKFYLQGRCPY 151
>UNIPROTKB|P47973 [details] [associations]
symbol:Zfp36 "Tristetraprolin" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0019957 "C-C chemokine binding" evidence=IEA]
[GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:620722 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0006950 GO:GO:0046872 GO:GO:0003677 GO:GO:0050728
GO:GO:0008270 GO:GO:0003729 GO:GO:0007243 GO:GO:0017091
GO:GO:0000122 GO:GO:0006402 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479
HOVERGEN:HBG008483 CTD:7538 KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4
EMBL:X63369 EMBL:AB025017 EMBL:BC060308 IPI:IPI00192126 PIR:JC1255
RefSeq:NP_579824.2 UniGene:Rn.82737 ProteinModelPortal:P47973
SMR:P47973 STRING:P47973 PhosphoSite:P47973 PRIDE:P47973
GeneID:79426 KEGG:rno:79426 UCSC:RGD:620722 InParanoid:P47973
NextBio:614778 Genevestigator:P47973 GermOnline:ENSRNOG00000019673
Uniprot:P47973
Length = 320
Score = 148 (57.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 14 HDETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+ E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 105 YSESGRCRYGAKCQFAHGPGELRQANRHPKYKTELCHKFYLQGRCPY 151
>UNIPROTKB|E2RKS9 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071889 "14-3-3 protein binding"
evidence=IEA] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0050779 "RNA destabilization" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035925 "mRNA 3'-UTR AU-rich region binding"
evidence=IEA] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA] [GO:0019957 "C-C chemokine binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006950 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0010494
GO:GO:0060213 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GeneTree:ENSGT00530000063262 GO:GO:0032680 GO:GO:0050779
OMA:RRLPIFN EMBL:AAEX03000957 Ensembl:ENSCAFT00000008910
Uniprot:E2RKS9
Length = 324
Score = 148 (57.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+TK+C ++ G CPY
Sbjct: 112 ESGRCRYGAKCQFAHGLGELRQASRHPKYKTKVCHKFYLQGGCPY 156
>UNIPROTKB|G3MWV8 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:DAAA02047057 EMBL:DAAA02047055
EMBL:DAAA02047056 Ensembl:ENSBTAT00000011308 Uniprot:G3MWV8
Length = 324
Score = 147 (56.8 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 112 ESGRCRYGAKCQFAHGLGELRQASRHPKYKTELCHKFYLQGRCPY 156
>UNIPROTKB|P53781 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0071889
"14-3-3 protein binding" evidence=ISS] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0017091 "AU-rich element binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0017091
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
GO:GO:0070935 GO:GO:0032680 HOVERGEN:HBG008483 EMBL:L42319
IPI:IPI00698292 RefSeq:NP_776918.1 UniGene:Bt.3863
ProteinModelPortal:P53781 SMR:P53781 PRIDE:P53781 GeneID:282127
KEGG:bta:282127 CTD:7538 KO:K15308 NextBio:20805964 Uniprot:P53781
Length = 324
Score = 147 (56.8 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 112 ESGRCRYGAKCQFAHGLGELRQASRHPKYKTELCHKFYLQGRCPY 156
>UNIPROTKB|Q0VCR3 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IEA] [GO:0019957 "C-C
chemokine binding" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0007243 "intracellular protein kinase cascade"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0006950 GO:GO:0050728 GO:GO:0008270
GO:GO:0003729 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0010494 GO:GO:0060213 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GeneTree:ENSGT00530000063262 GO:GO:0032680
GO:GO:0050779 HOVERGEN:HBG008483 IPI:IPI00698292 UniGene:Bt.3863
OMA:RRLPIFN EMBL:DAAA02047057 EMBL:DAAA02047055 EMBL:DAAA02047056
EMBL:BC120043 SMR:Q0VCR3 Ensembl:ENSBTAT00000066266 Uniprot:Q0VCR3
Length = 325
Score = 147 (56.8 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 112 ESGRCRYGAKCQFAHGLGELRQASRHPKYKTELCHKFYLQGRCPY 156
>UNIPROTKB|D0VE66 [details] [associations]
symbol:LOC100623625 "Tristetraprolin" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:FP102918 EMBL:FP236263
EMBL:GU066778 EMBL:HM484335 EMBL:HM480487 RefSeq:NP_001161891.1
RefSeq:XP_003355955.1 UniGene:Ssc.28024 STRING:D0VE66
Ensembl:ENSSSCT00000011714 Ensembl:ENSSSCT00000026750
GeneID:100316849 GeneID:100623625 KEGG:ssc:100316849
KEGG:ssc:100623625 Uniprot:D0VE66
Length = 326
Score = 147 (56.8 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 113 ESGRCRYGAKCQFAHGLGELRQASRHPKYKTELCHKFYLQGRCPY 157
>UNIPROTKB|P26651 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0050779 "RNA destabilization" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IMP;IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019957 "C-C chemokine binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0006950 "response to stress" evidence=IDA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IDA] [GO:1900153
"positive regulation of nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0010467 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0003727 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483
CTD:7538 KO:K15308 EMBL:M92843 EMBL:M92844 EMBL:M63625
EMBL:AK314042 EMBL:AY771351 EMBL:BC009693 IPI:IPI00000893
PIR:S34427 RefSeq:NP_003398.2 UniGene:Hs.534052
ProteinModelPortal:P26651 SMR:P26651 DIP:DIP-29845N IntAct:P26651
MINT:MINT-1171915 STRING:P26651 PhosphoSite:P26651 DMDM:136471
PRIDE:P26651 DNASU:7538 Ensembl:ENST00000248673 GeneID:7538
KEGG:hsa:7538 UCSC:uc002olh.1 GeneCards:GC19P039897 HGNC:HGNC:12862
HPA:HPA006009 MIM:190700 neXtProt:NX_P26651 PharmGKB:PA37451
InParanoid:P26651 OMA:RRLPIFN OrthoDB:EOG4S4PH4 PhylomeDB:P26651
ChiTaRS:ZFP36 GenomeRNAi:7538 NextBio:29497 Bgee:P26651
CleanEx:HS_ZFP36 Genevestigator:P26651 GermOnline:ENSG00000128016
Uniprot:P26651
Length = 326
Score = 146 (56.5 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 114 ESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPY 158
>UNIPROTKB|Q6S9E0 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9940 "Ovis aries"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0017091 "AU-rich
element binding" evidence=ISS] [GO:0032680 "regulation of tumor
necrosis factor production" evidence=ISS] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=ISS] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=ISS] [GO:0071889 "14-3-3 protein binding" evidence=ISS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0017091 GO:GO:0006402 GO:GO:0071889
GO:GO:0010494 GO:GO:0060213 GO:GO:0070935 GO:GO:0032680
HOVERGEN:HBG008483 CTD:7538 EMBL:AY462109 RefSeq:NP_001009765.1
UniGene:Oar.1075 ProteinModelPortal:Q6S9E0 SMR:Q6S9E0 GeneID:443283
Uniprot:Q6S9E0
Length = 325
Score = 145 (56.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
E+G C++G C+FAHG ELR RHP+Y+T+LC ++ G CPY
Sbjct: 112 ESGRCRYGAKCQFAHGLGELRQPSRHPKYKTELCHKFYLQGRCPY 156
>POMBASE|SPBC1718.07c [details] [associations]
symbol:zfs1 "CCCH tandem zinc finger protein, human
Tristetraprolin homolog Zfs1, involved in mRNA catabolism"
species:4896 "Schizosaccharomyces pombe" [GO:0000750
"pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IMP] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=IMP] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0031030 "negative regulation of septation
initiation signaling cascade" evidence=IGI] [GO:0031137 "regulation
of conjugation with cellular fusion" evidence=IGI] [GO:0035925
"mRNA 3'-UTR AU-rich region binding" evidence=IDA] [GO:0045839
"negative regulation of mitosis" evidence=IMP] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 PomBase:SPBC1718.07c
GO:GO:0005829 GO:GO:0005634 GO:GO:0051301 GO:GO:0007094
GO:GO:0031030 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0000750 GO:GO:0006402 GO:GO:0031137
eggNOG:COG5063 GO:GO:0010972 OrthoDB:EOG4W3WXK GO:GO:0035925
EMBL:D49913 PIR:T50335 RefSeq:NP_596453.1 ProteinModelPortal:P47979
SMR:P47979 MINT:MINT-4690404 STRING:P47979
EnsemblFungi:SPBC1718.07c.1 GeneID:2539958 KEGG:spo:SPBC1718.07c
NextBio:20801101 Uniprot:P47979
Length = 404
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 21/44 (47%), Positives = 34/44 (77%)
Query: 17 TGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+G C++G+ C+FAHG EL+ PRHP+Y+++ C+S+ G+CPY
Sbjct: 338 SGTCRYGSKCQFAHGNQELKEPPRHPKYKSERCRSFMMYGYCPY 381
>TAIR|locus:2033384 [details] [associations]
symbol:AT1G66810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC013288 IPI:IPI00526106 RefSeq:NP_176853.1
UniGene:At.70746 HSSP:P22893 ProteinModelPortal:Q9C9N3 SMR:Q9C9N3
PaxDb:Q9C9N3 PRIDE:Q9C9N3 EnsemblPlants:AT1G66810.1 GeneID:842999
KEGG:ath:AT1G66810 TAIR:At1g66810 eggNOG:COG5063
HOGENOM:HOG000238120 InParanoid:Q9C9N3 OMA:ELNEHYE PhylomeDB:Q9C9N3
ProtClustDB:CLSN2681801 Genevestigator:Q9C9N3 Uniprot:Q9C9N3
Length = 310
Score = 141 (54.7 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
ETG C +G C+FAHG ELR + RHPRY+T++C+ CPY
Sbjct: 243 ETGACCYGDNCQFAHGIDELRPVIRHPRYKTEVCRMMVTGAMCPY 287
>TAIR|locus:2199352 [details] [associations]
symbol:AT1G68200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC016447 HSSP:P22893
eggNOG:COG5063 HOGENOM:HOG000238120 EMBL:DQ446410 EMBL:DQ056514
EMBL:BT026077 IPI:IPI00524596 IPI:IPI00846853 PIR:D96705
RefSeq:NP_001077792.1 RefSeq:NP_176987.1 UniGene:At.52430
ProteinModelPortal:Q9C9F5 SMR:Q9C9F5 PaxDb:Q9C9F5 PRIDE:Q9C9F5
EnsemblPlants:AT1G68200.1 GeneID:843149 KEGG:ath:AT1G68200
GeneFarm:2969 TAIR:At1g68200 InParanoid:Q9C9F5 OMA:SVMENED
PhylomeDB:Q9C9F5 ProtClustDB:CLSN2682260 Genevestigator:Q9C9F5
Uniprot:Q9C9F5
Length = 308
Score = 137 (53.3 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
ETG C +G C+FAHG ELR + RHPRY+T++C+ CPY
Sbjct: 233 ETGTCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPY 277
>WB|WBGene00003228 [details] [associations]
symbol:mex-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0030010 "establishment of cell polarity" evidence=IMP]
[GO:0001704 "formation of primary germ layer" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0003674 "molecular_function" evidence=NAS]
[GO:0003723 "RNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0009792 GO:GO:0002009 GO:GO:0008270 GO:GO:0000003
GO:GO:0003723 GO:GO:0009880 GO:GO:0030010 EMBL:AL023828 HSSP:P22893
GO:GO:0043186 GeneTree:ENSGT00530000063262 GO:GO:0001704 CTD:174836
EMBL:U81043 EMBL:Z66516 PIR:T26124 RefSeq:NP_001254325.1
UniGene:Cel.7263 ProteinModelPortal:G5ECB9 SMR:G5ECB9 IntAct:G5ECB9
EnsemblMetazoa:W03C9.7a.1 EnsemblMetazoa:W03C9.7a.2
EnsemblMetazoa:W03C9.7a.3 GeneID:174836 KEGG:cel:CELE_W03C9.7
WormBase:W03C9.7a OMA:HVERNQT NextBio:885712 Uniprot:G5ECB9
Length = 494
Score = 126 (49.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 17 TGVCKFGTGCKFAHGAHELRVI--PR---HPRYRTKLCQSYHQDGFCPY 60
+G C +G C+FAHG +ELR+ PR HP+Y+T+LC + G CPY
Sbjct: 150 SGSCPYGEACRFAHGENELRMPSQPRGKAHPKYKTQLCDKFSNFGQCPY 198
>WB|WBGene00004078 [details] [associations]
symbol:pos-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA;IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0008340 GO:GO:0009792 GO:GO:0008266 GO:GO:0008270
GO:GO:0003730 GO:GO:0009880 GO:GO:0001106 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:FO081326 EMBL:AB006208 PIR:T37246
RefSeq:NP_505172.1 UniGene:Cel.19584 ProteinModelPortal:G5EF15
SMR:G5EF15 IntAct:G5EF15 EnsemblMetazoa:F52E1.1 GeneID:179224
KEGG:cel:CELE_F52E1.1 CTD:179224 WormBase:F52E1.1 OMA:QFIHKLV
ChEMBL:CHEMBL1293304 NextBio:904448 Uniprot:G5EF15
Length = 264
Score = 121 (47.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 20 CKFGTGCKFAHGAHELRVI--PR---HPRYRTKLCQSYHQDGFCPYVYFFKIFHPI 70
C +G C+FAHG HELR+ PR HP+Y+T LC + G C Y + H I
Sbjct: 113 CSYGDQCRFAHGVHELRLPMNPRGRNHPKYKTVLCDKFSMTGNCKYGTRCQFIHKI 168
>CGD|CAL0004295 [details] [associations]
symbol:orf19.5334 species:5476 "Candida albicans" [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IEA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 CGD:CAL0004295
GO:GO:0008270 GO:GO:0003676 EMBL:AACQ01000059 EMBL:AACQ01000058
eggNOG:COG5063 RefSeq:XP_717058.1 RefSeq:XP_717137.1
ProteinModelPortal:Q5A5R5 GeneID:3641257 GeneID:3641293
KEGG:cal:CaO19.12794 KEGG:cal:CaO19.5334 Uniprot:Q5A5R5
Length = 203
Score = 116 (45.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
+TGVC + C+FAHG +EL+ + R P++R+K C ++ + G C Y
Sbjct: 149 KTGVCPYANKCQFAHGENELKHVERPPKWRSKPCANWTKYGSCRY 193
>SGD|S000002558 [details] [associations]
symbol:CTH1 "Member of the CCCH zinc finger family"
species:4932 "Saccharomyces cerevisiae" [GO:0006879 "cellular iron
ion homeostasis" evidence=IGI] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 SGD:S000002558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006938 GO:GO:0006879 GO:GO:0000956 eggNOG:COG5063
EMBL:L42133 EMBL:Z50046 EMBL:AY557690 PIR:S57977 RefSeq:NP_010435.1
ProteinModelPortal:P47976 SMR:P47976 DIP:DIP-1784N IntAct:P47976
MINT:MINT-385004 STRING:P47976 EnsemblFungi:YDR151C GeneID:851729
KEGG:sce:YDR151C CYGD:YDR151c GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OMA:EIEEYYI OrthoDB:EOG4W3WXK NextBio:969448
Genevestigator:P47976 GermOnline:YDR151C Uniprot:P47976
Length = 325
Score = 121 (47.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 18 GVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
G CK+G C+FAHG +EL+ + YRTK C ++ + G+CPY
Sbjct: 217 GYCKYGNKCQFAHGLNELKFKKKSNNYRTKPCINWSKLGYCPY 259
>WB|WBGene00013794 [details] [associations]
symbol:dct-13 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:AL117204
HOGENOM:HOG000114669 PIR:T31489 RefSeq:NP_503017.1
ProteinModelPortal:Q9U2V4 SMR:Q9U2V4 STRING:Q9U2V4
EnsemblMetazoa:Y116A8C.17 GeneID:178476 KEGG:cel:CELE_Y116A8C.17
UCSC:Y116A8C.17 CTD:178476 WormBase:Y116A8C.17 InParanoid:Q9U2V4
NextBio:901284 Uniprot:Q9U2V4
Length = 205
Score = 115 (45.5 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 14 HDETGVCKFGTGCKFAHGAHELR---VIPRHPRYRTKLCQSYHQDGFCPY 60
H C +G CKFAHG HELR H Y+T LC + G+C Y
Sbjct: 101 HKRGKTCIYGEACKFAHGVHELRCQQTTRNHRNYKTVLCDKFTTTGYCKY 150
>WB|WBGene00003864 [details] [associations]
symbol:oma-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0001556 "oocyte maturation" evidence=IGI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 121 (47.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 16 ETGVCKFGTGCKFAHGAHELR---VIP-RHPRYRTKLCQSYHQDGFCPYVYFFKIFHP 69
E+ C F C+FAHG ELR V P ++ +Y+TKLC Y G CPY HP
Sbjct: 123 ESKTCSFADNCRFAHGEEELRPTFVEPLQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP 180
>UNIPROTKB|G5EC86 [details] [associations]
symbol:oma-1 "Protein OMA-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 121 (47.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 16 ETGVCKFGTGCKFAHGAHELR---VIP-RHPRYRTKLCQSYHQDGFCPYVYFFKIFHP 69
E+ C F C+FAHG ELR V P ++ +Y+TKLC Y G CPY HP
Sbjct: 123 ESKTCSFADNCRFAHGEEELRPTFVEPLQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP 180
>WB|WBGene00003865 [details] [associations]
symbol:oma-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0001556 "oocyte maturation" evidence=IGI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0008270 GO:GO:0003676
EMBL:FO080486 GO:GO:0001556 eggNOG:COG5063 GO:GO:0043186
GeneTree:ENSGT00530000063262 PIR:T28994 RefSeq:NP_505069.1
ProteinModelPortal:Q23359 SMR:Q23359 DIP:DIP-26006N IntAct:Q23359
MINT:MINT-251688 STRING:Q23359 PaxDb:Q23359
EnsemblMetazoa:ZC513.6.1 EnsemblMetazoa:ZC513.6.2 GeneID:179183
KEGG:cel:CELE_ZC513.6 UCSC:ZC513.6 CTD:179183 WormBase:ZC513.6
HOGENOM:HOG000016873 InParanoid:Q23359 OMA:HIMTGGR NextBio:904278
Uniprot:Q23359
Length = 393
Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 16 ETGVCKFGTGCKFAHGAHELR--VIP--RHPRYRTKLCQSYHQDGFCPYVYFFKIFHP 69
E+ C F C+FAHG ELR +I ++ +YRTKLC Y G CPY HP
Sbjct: 116 ESKTCAFAENCRFAHGEEELRPSLIEARQNNKYRTKLCDKYTTTGLCPYGKRCLFIHP 173
>WB|WBGene00013797 [details] [associations]
symbol:Y116A8C.20 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:AL117204
HOGENOM:HOG000114669 PIR:T31492 RefSeq:NP_503020.1
ProteinModelPortal:Q9U2V1 SMR:Q9U2V1 STRING:Q9U2V1
EnsemblMetazoa:Y116A8C.20 GeneID:178478 KEGG:cel:CELE_Y116A8C.20
UCSC:Y116A8C.20 CTD:178478 WormBase:Y116A8C.20 InParanoid:Q9U2V1
NextBio:901292 Uniprot:Q9U2V1
Length = 201
Score = 112 (44.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 14 HDETGVCKFGTGCKFAHGAHELR---VIPRHPRYRTKLCQSYHQDGFCPY 60
H C +G CKFAHG HELR H Y+T LC + G+C Y
Sbjct: 97 HKRGKTCIYGEQCKFAHGVHELRCQQAKKNHRNYKTVLCDKFTTTGYCKY 146
>WB|WBGene00003230 [details] [associations]
symbol:mex-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0008187
"poly-pyrimidine tract binding" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IGI;IMP] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0019901
"protein kinase binding" evidence=IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0040007 GO:GO:0005813 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0032880 GO:GO:0003730
eggNOG:COG5063 GO:GO:0043186 GO:GO:0008187
GeneTree:ENSGT00530000063262 EMBL:Z82286 PIR:T26081
RefSeq:NP_502566.1 ProteinModelPortal:Q9XUB2 SMR:Q9XUB2
IntAct:Q9XUB2 STRING:Q9XUB2 PaxDb:Q9XUB2 EnsemblMetazoa:W02A2.7.1
EnsemblMetazoa:W02A2.7.2 GeneID:178296 KEGG:cel:CELE_W02A2.7
UCSC:W02A2.7 CTD:178296 WormBase:W02A2.7 HOGENOM:HOG000113570
InParanoid:Q9XUB2 OMA:RYHRVME BindingDB:Q9XUB2 ChEMBL:CHEMBL1293319
NextBio:900550 Uniprot:Q9XUB2
Length = 468
Score = 118 (46.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 20 CKFGTGCKFAHGAHELRVI--P-RHP--RYRTKLCQSYHQDG--FCPYVYFFKIFHP 69
C G CKFAHG ELR P R+P +Y+TKLC+++ + G FCPY + HP
Sbjct: 286 CDMGARCKFAHGLKELRATDAPARYPNNKYKTKLCKNFARGGTGFCPYGLRCEFVHP 342
>WB|WBGene00003231 [details] [associations]
symbol:mex-6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA] [GO:0032880 "regulation of
protein localization" evidence=IGI] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0019901 "protein kinase
binding" evidence=IPI] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0009792 GO:GO:0002009
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0010171
GO:GO:0040011 GO:GO:0032880 GO:GO:0003730 eggNOG:COG5063
GO:GO:0043186 GeneTree:ENSGT00530000063262 EMBL:Z48009
HOGENOM:HOG000113570 PIR:T18624 RefSeq:NP_496043.1
ProteinModelPortal:Q09436 SMR:Q09436 DIP:DIP-26165N IntAct:Q09436
MINT:MINT-1040479 STRING:Q09436 PaxDb:Q09436 EnsemblMetazoa:AH6.5.1
EnsemblMetazoa:AH6.5.2 GeneID:174504 KEGG:cel:CELE_AH6.5 UCSC:AH6.5
CTD:174504 WormBase:AH6.5 InParanoid:Q09436 NextBio:884312
Uniprot:Q09436
Length = 467
Score = 117 (46.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 20 CKFGTGCKFAHGAHELRV--IP-RHP--RYRTKLCQSYHQ--DGFCPYVYFFKIFHP 69
C G CKFAHG ELR IP R+P +Y+TKLC+++ + G CPY + HP
Sbjct: 289 CALGARCKFAHGLKELRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGLRCEFVHP 345
>WB|WBGene00003388 [details] [associations]
symbol:moe-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0048599 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z81521
HOGENOM:HOG000016873 PIR:T21620 RefSeq:NP_496795.1
UniGene:Cel.15255 ProteinModelPortal:Q9XV46 SMR:Q9XV46
DIP:DIP-25142N IntAct:Q9XV46 MINT:MINT-1108588 STRING:Q9XV46
EnsemblMetazoa:F32A11.6 GeneID:174960 KEGG:cel:CELE_F32A11.6
UCSC:F32A11.6 CTD:174960 WormBase:F32A11.6 InParanoid:Q9XV46
OMA:HLAEDMA NextBio:886196 Uniprot:Q9XV46
Length = 367
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 24/58 (41%), Positives = 27/58 (46%)
Query: 16 ETGVCKFGTGCKFAHGAHELRVIPRHPR----YRTKLCQSYHQDGFCPYVYFFKIFHP 69
E+ C F C+FAHG ELR R Y+TKLC Y G CPY HP
Sbjct: 141 ESKTCTFAENCRFAHGEEELRPAKLESRQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP 198
>WB|WBGene00009537 [details] [associations]
symbol:ccch-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:Z82267 HOGENOM:HOG000114059
PIR:T21961 RefSeq:NP_502931.1 ProteinModelPortal:O45491 SMR:O45491
IntAct:O45491 STRING:O45491 EnsemblMetazoa:F38C2.5 GeneID:178454
KEGG:cel:CELE_F38C2.5 UCSC:F38C2.5 CTD:178454 WormBase:F38C2.5
InParanoid:O45491 NextBio:901202 Uniprot:O45491
Length = 186
Score = 107 (42.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 17 TGVCKFGTGCKFAHGAHELRVIPR-----HPRYRTKLCQSYHQDGFCPY 60
T C +G CKFAH EL++ + HP+Y+T LC ++ + G C Y
Sbjct: 84 TRACSYGEQCKFAHSVEELQLKQKNRGVNHPKYKTVLCDNFSRTGHCKY 132
>SGD|S000004126 [details] [associations]
symbol:TIS11 "mRNA-binding protein expressed during iron
starvation" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IMP] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 SGD:S000004126 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006945 GO:GO:0006879 EMBL:X91258 EMBL:U53881 GO:GO:0000932
GO:GO:0000956 eggNOG:COG5063 GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OrthoDB:EOG4W3WXK EMBL:S76619 EMBL:L42134
EMBL:Z73308 EMBL:AY558210 PIR:S59328 RefSeq:NP_013237.1
ProteinModelPortal:P47977 SMR:P47977 DIP:DIP-5614N IntAct:P47977
MINT:MINT-504800 STRING:P47977 EnsemblFungi:YLR136C GeneID:850827
KEGG:sce:YLR136C CYGD:YLR136c NextBio:967088 Genevestigator:P47977
GermOnline:YLR136C Uniprot:P47977
Length = 285
Score = 111 (44.1 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 18 GVCKFGTGCKFAHGAHELRVIPRHPRYRTKLCQSYHQDGFCPY 60
G C +G+ C+FAHG EL+V +RTK C ++ + G+CPY
Sbjct: 182 GSCPYGSKCQFAHGLGELKVKKSCKNFRTKPCVNWEKLGYCPY 224
>UNIPROTKB|F1LVN6 [details] [associations]
symbol:F1LVN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 PROSITE:PS50103 GO:GO:0008270 GO:GO:0003676
IPI:IPI00564509 Ensembl:ENSRNOT00000041400 Uniprot:F1LVN6
Length = 311
Score = 110 (43.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 27 KFAHGAHELRVIPRHPRYRTKLCQSYHQDGFC---PYVYF 63
+F HG HELR + HP+Y+T+LC+++H FC P YF
Sbjct: 31 QFPHGFHELRSLTGHPKYKTELCRTFHTISFCSCSPRCYF 70
>WB|WBGene00013796 [details] [associations]
symbol:Y116A8C.19 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
HSSP:P22893 eggNOG:COG5063 GeneTree:ENSGT00530000063262
EMBL:AL117204 HOGENOM:HOG000114669 PIR:T31491 RefSeq:NP_503019.1
ProteinModelPortal:Q9U2V2 SMR:Q9U2V2 STRING:Q9U2V2
EnsemblMetazoa:Y116A8C.19 GeneID:178477 KEGG:cel:CELE_Y116A8C.19
UCSC:Y116A8C.19 CTD:178477 WormBase:Y116A8C.19 InParanoid:Q9U2V2
NextBio:901288 Uniprot:Q9U2V2
Length = 196
Score = 104 (41.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 20 CKFGTGCKFAHGAHELRVIPR---HPRYRTKLCQSYHQDGFCPY 60
C +G CKFAH HELR H Y+T LC + G+C Y
Sbjct: 98 CIYGEQCKFAHSVHELRFTQAKKTHRNYKTVLCDKFSTTGYCKY 141
>WB|WBGene00007961 [details] [associations]
symbol:C35D6.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82261 PIR:T19760
RefSeq:NP_502949.1 UniGene:Cel.13375 ProteinModelPortal:O45289
SMR:O45289 STRING:O45289 EnsemblMetazoa:C35D6.4 GeneID:183235
KEGG:cel:CELE_C35D6.4 UCSC:C35D6.4 CTD:183235 WormBase:C35D6.4
HOGENOM:HOG000114669 InParanoid:O45289 NextBio:920410
Uniprot:O45289
Length = 203
Score = 104 (41.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 20 CKFGTGCKFAHGAHELRVIPR----HPRYRTKLCQSYHQDGFCPY 60
C +G CKFAH HELR P+ H Y+T LC ++ G C Y
Sbjct: 103 CAYGEKCKFAHSVHELR-FPQTKRNHRNYKTVLCNNFSTTGHCKY 146
>WB|WBGene00009539 [details] [associations]
symbol:F38C2.7 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82267
HOGENOM:HOG000114669 PIR:T21963 RefSeq:NP_502930.1
UniGene:Cel.12984 ProteinModelPortal:O45493 SMR:O45493
IntAct:O45493 STRING:O45493 EnsemblMetazoa:F38C2.7 GeneID:185463
KEGG:cel:CELE_F38C2.7 UCSC:F38C2.7 CTD:185463 WormBase:F38C2.7
InParanoid:O45493 NextBio:928376 Uniprot:O45493
Length = 203
Score = 104 (41.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 20 CKFGTGCKFAHGAHELRVIPR----HPRYRTKLCQSYHQDGFCPY 60
C +G CKFAH HELR P+ H Y+T LC ++ G C Y
Sbjct: 103 CAYGEKCKFAHSVHELR-FPQTKRNHRNYKTVLCNNFSTTGHCKY 146
>WB|WBGene00013370 [details] [associations]
symbol:Y60A9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 HOGENOM:HOG000114669
EMBL:AL110495 RefSeq:NP_510397.1 UniGene:Cel.512
ProteinModelPortal:Q9U1Y2 SMR:Q9U1Y2 EnsemblMetazoa:Y60A9.3
GeneID:190441 KEGG:cel:CELE_Y60A9.3 UCSC:Y60A9.3 CTD:190441
WormBase:Y60A9.3 InParanoid:Q9U1Y2 NextBio:945766 Uniprot:Q9U1Y2
Length = 203
Score = 103 (41.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 20 CKFGTGCKFAHGAHELRVIPR----HPRYRTKLCQSYHQDGFCPY 60
C +G CKFAH HELR P+ H Y+T LC + G C Y
Sbjct: 103 CAYGEKCKFAHSVHELR-FPQTKRNHRNYKTVLCNKFSTTGHCKY 146
>TAIR|locus:2062476 [details] [associations]
symbol:AT2G35430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC005314 HSSP:P47974
HOGENOM:HOG000242590 EMBL:BT020232 EMBL:BT020553 IPI:IPI00545818
PIR:E84768 RefSeq:NP_181086.2 UniGene:At.49567
ProteinModelPortal:Q5PP65 SMR:Q5PP65 PaxDb:Q5PP65 PRIDE:Q5PP65
EnsemblPlants:AT2G35430.1 GeneID:818109 KEGG:ath:AT2G35430
TAIR:At2g35430 eggNOG:NOG298782 InParanoid:Q5PP65 OMA:PDKISRV
PhylomeDB:Q5PP65 ProtClustDB:CLSN2915129 Genevestigator:Q5PP65
Uniprot:Q5PP65
Length = 252
Score = 61 (26.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 18 GVCKFG-TGCKFAHGAHELRVIPRHP 42
G C + + C FAH A ELR+ P P
Sbjct: 83 GTCPYSASSCHFAHSAEELRLPPPPP 108
Score = 58 (25.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 40 RHPRYRTKLCQSYHQDGFCPY 60
+ P ++T++C + G+CP+
Sbjct: 140 KSPNWKTRICNKWQTTGYCPF 160
>WB|WBGene00013319 [details] [associations]
symbol:ccch-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0009792 EMBL:Z99281 GO:GO:0008270 GO:GO:0000003
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262
PIR:T27239 RefSeq:NP_502805.1 ProteinModelPortal:O18251 SMR:O18251
STRING:O18251 EnsemblMetazoa:Y57G11C.25 GeneID:178412
KEGG:cel:CELE_Y57G11C.25 UCSC:Y57G11C.25 CTD:178412
WormBase:Y57G11C.25 HOGENOM:HOG000114059 InParanoid:O18251
NextBio:901036 Uniprot:O18251
Length = 199
Score = 96 (38.9 bits), Expect = 0.00010, P = 0.00010
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 17 TGVCKFGTGCKFAHGAHELRVIPRH-----PRYRTKLCQSYHQDGFCPY 60
T C +G CKFAH EL++ ++ P+Y+T LC ++ G C Y
Sbjct: 80 TKACSYGEQCKFAHSVEELQLKHQNLGINNPKYKTVLCDNFSTTGHCKY 128
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.147 0.510 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 80 80 0.00091 102 3 12 22 0.38 29
29 0.41 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 439 (47 KB)
Total size of DFA: 86 KB (2067 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.85u 0.10s 6.95t Elapsed: 00:00:05
Total cpu time: 6.85u 0.11s 6.96t Elapsed: 00:00:05
Start: Thu Aug 15 16:30:22 2013 End: Thu Aug 15 16:30:27 2013