Query psy15068
Match_columns 710
No_of_seqs 333 out of 3412
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 19:37:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15068.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15068hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 7.4E-63 2.5E-67 511.4 46.0 397 78-641 3-399 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.8E-63 6.1E-68 516.1 38.7 387 184-665 3-389 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 3.2E-45 1.1E-49 364.7 33.8 305 54-488 23-330 (337)
4 4g8k_A 2-5A-dependent ribonucl 100.0 5.4E-45 1.9E-49 363.0 34.9 255 22-309 24-285 (337)
5 3utm_A Tankyrase-1; tankyrase, 100.0 3.5E-44 1.2E-48 361.0 29.2 338 43-471 11-351 (351)
6 3utm_A Tankyrase-1; tankyrase, 100.0 5E-43 1.7E-47 352.6 31.7 327 18-434 19-349 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 1.7E-42 5.7E-47 337.7 29.8 264 22-294 4-283 (285)
8 1wdy_A 2-5A-dependent ribonucl 100.0 9.3E-42 3.2E-46 332.4 31.4 256 54-320 3-274 (285)
9 2fo1_E LIN-12 protein; beta-ba 100.0 2.7E-42 9.4E-47 346.9 21.4 326 197-644 38-371 (373)
10 2xai_A ASB-9, ankyrin repeat a 100.0 1.6E-41 5.6E-46 323.8 23.9 242 377-700 2-252 (261)
11 3d9h_A CDNA FLJ77766, highly s 100.0 5E-40 1.7E-44 317.3 24.7 228 85-327 54-281 (285)
12 3d9h_A CDNA FLJ77766, highly s 100.0 3.3E-40 1.1E-44 318.5 23.4 260 19-292 11-282 (285)
13 2fo1_E LIN-12 protein; beta-ba 100.0 6.1E-41 2.1E-45 337.1 17.6 311 23-403 37-371 (373)
14 3ljn_A Hypothetical protein; a 100.0 1.2E-40 4.2E-45 335.5 16.2 263 368-677 10-315 (364)
15 3ljn_A Hypothetical protein; a 100.0 3.7E-40 1.2E-44 332.0 18.5 244 421-700 17-303 (364)
16 2xai_A ASB-9, ankyrin repeat a 100.0 4.6E-39 1.6E-43 306.9 24.0 247 56-318 3-257 (261)
17 1oy3_D Transcription factor in 100.0 5.1E-39 1.8E-43 312.1 21.6 264 371-664 2-269 (282)
18 1yyh_A HN1;, notch 1, ankyrin 100.0 8.3E-39 2.9E-43 303.7 21.3 229 48-286 2-245 (253)
19 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-38 4.3E-43 302.5 21.1 219 370-665 2-235 (253)
20 3b7b_A Euchromatic histone-lys 100.0 2E-37 6.7E-42 292.1 25.8 228 47-284 2-230 (237)
21 1k1a_A B-cell lymphoma 3-encod 100.0 4.9E-38 1.7E-42 297.3 20.1 229 50-287 3-239 (241)
22 4b93_B Ankyrin repeat domain-c 100.0 1.6E-38 5.6E-43 302.1 15.9 226 420-677 7-245 (269)
23 1k1a_A B-cell lymphoma 3-encod 100.0 1E-37 3.5E-42 295.1 21.4 223 420-674 5-239 (241)
24 1oy3_D Transcription factor in 100.0 7.8E-38 2.7E-42 303.8 20.1 253 49-310 2-271 (282)
25 3b7b_A Euchromatic histone-lys 100.0 4.8E-37 1.6E-41 289.4 24.7 220 369-665 2-222 (237)
26 3kea_A K1L; tropism, ANK repea 100.0 4.9E-38 1.7E-42 303.1 17.9 242 32-294 9-251 (285)
27 3aji_A 26S proteasome non-ATPa 100.0 2.7E-37 9.2E-42 289.8 22.0 225 56-289 6-230 (231)
28 4b93_B Ankyrin repeat domain-c 100.0 4.9E-38 1.7E-42 298.8 16.4 237 374-644 7-244 (269)
29 3aji_A 26S proteasome non-ATPa 100.0 1.8E-37 6.3E-42 291.0 20.0 222 424-676 6-230 (231)
30 2dzn_A Probable 26S proteasome 100.0 9.8E-37 3.4E-41 285.5 19.6 212 424-698 2-220 (228)
31 3eu9_A Huntingtin-interacting 100.0 1.6E-35 5.4E-40 280.1 24.8 231 50-290 3-236 (240)
32 3kea_A K1L; tropism, ANK repea 100.0 1.9E-36 6.4E-41 292.0 18.4 239 358-651 13-253 (285)
33 3eu9_A Huntingtin-interacting 100.0 1.3E-35 4.3E-40 280.8 23.7 232 371-677 2-236 (240)
34 1s70_B 130 kDa myosin-binding 100.0 3.9E-37 1.3E-41 301.3 11.8 277 384-705 4-284 (299)
35 1s70_B 130 kDa myosin-binding 100.0 1.8E-35 6.1E-40 289.5 23.6 271 29-320 4-285 (299)
36 2f8y_A Notch homolog 1, transl 100.0 2.2E-35 7.5E-40 275.1 22.1 214 34-290 2-217 (223)
37 1sw6_A Regulatory protein SWI6 100.0 3.7E-37 1.2E-41 303.2 8.0 262 359-663 33-326 (327)
38 1sw6_A Regulatory protein SWI6 100.0 4E-37 1.4E-41 302.9 8.2 257 29-308 25-327 (327)
39 2dzn_A Probable 26S proteasome 100.0 5.5E-35 1.9E-39 273.6 21.7 209 23-239 2-217 (228)
40 2f8y_A Notch homolog 1, transl 100.0 5E-35 1.7E-39 272.7 20.6 213 67-325 2-216 (223)
41 1ikn_D Protein (I-kappa-B-alph 100.0 4.2E-35 1.4E-39 275.4 13.4 219 373-662 3-228 (236)
42 2rfa_A Transient receptor pote 100.0 1.8E-33 6.1E-38 263.9 22.7 212 377-651 2-229 (232)
43 4gpm_A Engineered protein OR26 100.0 1.1E-33 3.7E-38 246.8 17.8 156 26-188 7-162 (169)
44 2rfa_A Transient receptor pote 100.0 1.4E-33 4.8E-38 264.5 19.6 195 22-224 2-225 (232)
45 4gpm_A Engineered protein OR26 100.0 1E-32 3.5E-37 240.6 20.0 159 58-224 6-164 (169)
46 3hra_A Ankyrin repeat family p 100.0 2E-32 6.7E-37 250.5 21.7 196 21-219 3-201 (201)
47 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-33 3.7E-38 265.8 13.7 206 19-232 4-222 (236)
48 2etb_A Transient receptor pote 100.0 4E-33 1.4E-37 265.5 15.7 201 424-677 2-247 (256)
49 2etb_A Transient receptor pote 100.0 3.4E-33 1.1E-37 266.1 12.9 195 22-224 1-249 (256)
50 2pnn_A Transient receptor pote 100.0 6.1E-33 2.1E-37 267.0 14.2 217 420-691 9-272 (273)
51 3hra_A Ankyrin repeat family p 100.0 3.1E-31 1.1E-35 242.5 23.0 192 54-287 3-201 (201)
52 2pnn_A Transient receptor pote 100.0 3.8E-32 1.3E-36 261.4 12.7 212 18-231 8-269 (273)
53 2vge_A RELA-associated inhibit 100.0 7.6E-33 2.6E-37 256.3 6.5 200 475-701 1-203 (229)
54 3jxi_A Vanilloid receptor-rela 100.0 1E-31 3.5E-36 256.6 13.4 203 422-677 3-251 (260)
55 3jxi_A Vanilloid receptor-rela 100.0 2.1E-31 7.1E-36 254.5 12.3 202 21-223 3-252 (260)
56 4hbd_A KN motif and ankyrin re 100.0 6.9E-30 2.4E-34 244.6 16.9 189 24-219 77-273 (276)
57 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-29 4.1E-34 224.0 17.0 156 22-184 13-168 (169)
58 2rfm_A Putative ankyrin repeat 100.0 1.6E-29 5.3E-34 228.8 16.1 163 49-219 28-190 (192)
59 2y1l_E Darpin-8.4; hydrolase-i 100.0 8.2E-29 2.8E-33 218.6 19.9 159 53-219 11-169 (169)
60 3v30_A DNA-binding protein rfx 100.0 1.5E-29 5E-34 224.5 15.2 166 57-229 3-168 (172)
61 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.5E-29 5E-34 222.3 14.6 141 25-167 7-148 (162)
62 3v30_A DNA-binding protein rfx 100.0 2.8E-29 9.5E-34 222.8 16.3 169 23-199 2-171 (172)
63 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.9E-30 9.8E-35 242.0 10.3 210 456-696 2-228 (239)
64 2rfm_A Putative ankyrin repeat 100.0 3.4E-29 1.2E-33 226.6 16.6 160 19-185 31-190 (192)
65 3v31_A Ankyrin repeat family A 100.0 4.1E-29 1.4E-33 220.4 16.2 158 23-187 3-160 (167)
66 2aja_A Ankyrin repeat family p 100.0 5.6E-32 1.9E-36 267.1 -2.8 262 25-318 67-368 (376)
67 4hbd_A KN motif and ankyrin re 100.0 1.1E-29 3.8E-34 243.2 12.6 194 424-642 76-273 (276)
68 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.7E-29 2.6E-33 217.6 16.9 158 55-221 4-162 (162)
69 3f6q_A Integrin-linked protein 100.0 1.8E-28 6E-33 218.9 18.6 166 21-193 3-169 (179)
70 3v31_A Ankyrin repeat family A 100.0 1.3E-28 4.3E-33 217.3 17.5 159 55-221 2-160 (167)
71 2vge_A RELA-associated inhibit 100.0 3.6E-31 1.2E-35 245.0 0.1 156 39-202 1-162 (229)
72 2aja_A Ankyrin repeat family p 100.0 4E-31 1.4E-35 261.0 -0.9 265 380-709 67-372 (376)
73 3f6q_A Integrin-linked protein 100.0 2.2E-28 7.4E-33 218.3 16.5 168 54-228 3-170 (179)
74 1awc_B Protein (GA binding pro 100.0 2.7E-28 9.2E-33 211.4 16.5 141 25-167 4-144 (153)
75 3twr_A Tankyrase-2; ankyrin re 100.0 2.6E-28 8.9E-33 214.8 15.8 155 23-185 8-163 (165)
76 1awc_B Protein (GA binding pro 100.0 7.7E-28 2.6E-32 208.5 18.4 151 56-215 2-152 (153)
77 3twr_A Tankyrase-2; ankyrin re 100.0 2.7E-28 9.2E-33 214.7 15.4 161 52-220 4-164 (165)
78 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.5E-27 1.2E-31 205.4 18.1 153 56-217 2-154 (156)
79 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.2E-27 1.1E-31 205.7 15.8 153 23-184 2-155 (156)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.4E-28 4.8E-33 230.5 7.2 166 526-698 13-193 (239)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 1.9E-27 6.5E-32 206.5 8.9 142 545-693 6-151 (156)
82 1d9s_A Cyclin-dependent kinase 99.9 1.3E-26 4.6E-31 195.9 11.1 134 46-187 2-136 (136)
83 1d9s_A Cyclin-dependent kinase 99.9 6.6E-27 2.3E-31 197.8 8.5 131 541-676 2-136 (136)
84 3t8k_A Uncharacterized protein 99.9 3.1E-26 1.1E-30 203.4 11.9 160 56-220 6-178 (186)
85 3t8k_A Uncharacterized protein 99.9 1.1E-26 3.6E-31 206.4 7.9 161 22-191 5-183 (186)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 2.9E-26 1E-30 199.0 10.0 140 20-161 9-149 (156)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 4E-25 1.4E-29 186.8 13.3 123 22-145 13-135 (136)
88 3deo_A Signal recognition part 99.9 1.5E-25 5E-30 200.4 10.0 165 28-218 5-181 (183)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-24 4.3E-29 183.7 15.0 128 51-185 9-136 (136)
90 3c5r_A BARD-1, BRCA1-associate 99.9 5.7E-25 1.9E-29 186.3 12.0 130 541-675 1-133 (137)
91 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.1E-24 7.3E-29 180.4 14.5 125 23-148 2-126 (126)
92 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.7E-24 1.3E-28 178.9 14.8 126 55-187 1-126 (126)
93 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-24 3.7E-29 184.6 11.5 133 46-186 1-133 (137)
94 3deo_A Signal recognition part 99.9 3.5E-25 1.2E-29 197.9 7.5 137 548-704 41-177 (183)
95 3ui2_A Signal recognition part 99.9 1.1E-24 3.8E-29 204.2 10.2 172 21-221 13-185 (244)
96 2b0o_E UPLC1; arfgap, structur 99.9 9.1E-23 3.1E-27 196.5 18.7 131 526-665 159-298 (301)
97 3aaa_C Myotrophin, protein V-1 99.9 1.1E-23 3.8E-28 174.5 10.0 115 548-665 4-118 (123)
98 3aaa_C Myotrophin, protein V-1 99.9 3.6E-23 1.2E-27 171.4 13.0 114 53-167 4-117 (123)
99 3ui2_A Signal recognition part 99.9 2.1E-23 7.3E-28 195.4 12.5 135 549-703 43-177 (244)
100 3ehr_A Osteoclast-stimulating 99.9 7.6E-24 2.6E-28 196.3 8.5 136 546-687 68-207 (222)
101 2b0o_E UPLC1; arfgap, structur 99.9 6.3E-23 2.1E-27 197.7 12.1 143 53-209 148-299 (301)
102 3ehr_A Osteoclast-stimulating 99.9 1.6E-22 5.4E-27 187.3 11.6 135 51-192 68-203 (222)
103 1dcq_A PYK2-associated protein 99.9 2.8E-21 9.7E-26 183.9 18.8 117 526-644 138-263 (278)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.5E-21 5.3E-26 152.1 12.2 93 55-148 1-93 (93)
105 3jue_A Arfgap with coiled-coil 99.9 3.5E-22 1.2E-26 196.3 9.8 147 548-698 196-349 (368)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.2E-21 7.5E-26 151.2 11.6 93 550-644 1-93 (93)
107 3jue_A Arfgap with coiled-coil 99.9 6.7E-21 2.3E-25 187.2 15.4 148 526-677 207-365 (368)
108 2l6b_A NR1C; ankyrin, consensu 99.8 1.4E-21 4.9E-26 159.5 8.7 109 546-656 4-112 (115)
109 1dcq_A PYK2-associated protein 99.8 2.1E-20 7.3E-25 177.9 17.6 167 13-186 56-262 (278)
110 3lvq_E ARF-GAP with SH3 domain 99.8 2.6E-21 9E-26 201.3 11.3 126 520-647 134-268 (497)
111 3lvq_E ARF-GAP with SH3 domain 99.8 5.6E-21 1.9E-25 198.9 13.6 126 25-151 134-268 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.8 4.4E-21 1.5E-25 156.6 8.6 108 51-159 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 3.2E-18 1.1E-22 137.7 11.6 93 49-142 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 6.7E-18 2.3E-22 135.8 9.7 93 544-638 17-109 (110)
115 1gp8_A Protein (scaffolding pr 31.7 37 0.0013 19.6 2.3 19 59-77 16-34 (40)
116 3mkq_B Coatomer subunit alpha; 30.9 1.6E+02 0.0054 24.6 7.1 108 23-146 8-116 (177)
117 3zrh_A Ubiquitin thioesterase 26.0 1.6E+02 0.0054 28.3 6.8 63 62-144 28-90 (454)
118 3qil_A Clathrin heavy chain 1; 25.6 14 0.00049 28.3 -0.1 33 47-79 26-58 (125)
119 4g26_A Pentatricopeptide repea 23.1 1.6E+02 0.0053 29.9 7.1 132 36-183 46-199 (501)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.4e-63 Score=511.44 Aligned_cols=397 Identities=28% Similarity=0.367 Sum_probs=317.2
Q ss_pred cCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCC
Q psy15068 78 TGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMV 157 (710)
Q Consensus 78 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 157 (710)
.|+ +++..+..|+||||+|+..|+.++|++|++.|++++..+..|.||||+|+..|+.++|++|+++|++++.++..|.
T Consensus 3 ~g~-~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 81 (437)
T 1n11_A 3 PGI-SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ 81 (437)
T ss_dssp -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred CCC-CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 455 7888899999999999999999999999999999999999999999999999999999999999999888887777
Q ss_pred chhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHH
Q psy15068 158 TPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFA 237 (710)
Q Consensus 158 ~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A 237 (710)
|||++|+..| +.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|++.+++.
T Consensus 82 t~L~~A~~~g------~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--------------- 139 (437)
T 1n11_A 82 TPLHCAARIG------HTNMVKLLLENNANPNLATT-AGHTPLHIAAREGHVETVLALLEKEASQ--------------- 139 (437)
T ss_dssp CHHHHHHHHT------CHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHHTCHHHHHHHHHTTCCS---------------
T ss_pred CHHHHHHHCC------CHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------
Confidence 7777777777 77777777777777666665 6666776666666666666666655543
Q ss_pred HhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHH
Q psy15068 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEY 317 (710)
Q Consensus 238 ~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~ 317 (710)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++.
T Consensus 140 --------------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~------- 192 (437)
T 1n11_A 140 --------------------ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL------- 192 (437)
T ss_dssp --------------------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCH-------
T ss_pred --------------------cCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH-------
Confidence 34455667788888888888888888888888777777777888887777766
Q ss_pred HhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy15068 318 LLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL 397 (710)
Q Consensus 318 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~L 397 (710)
+++++|+++|.+++..+..|.||||+|+..|+.+++++|
T Consensus 193 -----------------------------------------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 231 (437)
T 1n11_A 193 -----------------------------------------DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 231 (437)
T ss_dssp -----------------------------------------HHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -----------------------------------------HHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 444445556667777777888888888888888888888
Q ss_pred HHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHH
Q psy15068 398 IQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKE 477 (710)
Q Consensus 398 l~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~ 477 (710)
++.|++++..+.. |.||||+|+.. ++.+++++|+++|++++.. +..|.||||+|+..|+.+++++
T Consensus 232 l~~g~~~~~~~~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~ 296 (437)
T 1n11_A 232 LQYGGSANAESVQ-------------GVTPLHLAAQE-GHAEMVALLLSKQANGNLG-NKSGLTPLHLVAQEGHVPVADV 296 (437)
T ss_dssp HHTTCCTTCCCTT-------------CCCHHHHHHHT-TCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHcCCCCCCCCCC-------------CCCHHHHHHHC-CCHHHHHHHHhcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHH
Confidence 8888888877666 88899988888 8888999988888888877 8888888888888888888888
Q ss_pred HHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHH
Q psy15068 478 LQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIY 557 (710)
Q Consensus 478 Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~ 557 (710)
|+++|+++ +.++..|.||||+
T Consensus 297 Ll~~g~~~-----------------------------------------------------------~~~~~~g~t~L~~ 317 (437)
T 1n11_A 297 LIKHGVMV-----------------------------------------------------------DATTRMGYTPLHV 317 (437)
T ss_dssp HHHHTCCT-----------------------------------------------------------TCCCSSCCCHHHH
T ss_pred HHhCCccC-----------------------------------------------------------CCCCCCCCCHHHH
Confidence 87776654 4455778899999
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHH
Q psy15068 558 VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDL 637 (710)
Q Consensus 558 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 637 (710)
|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.++|++|+++|++++.++ .+|.|||++|...|+.+++++
T Consensus 318 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~ga~~~~~~-~~g~t~l~~A~~~g~~~~~~~ 395 (437)
T 1n11_A 318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ-GHTDIVTLLLKNGASPNEVS-SDGTTPLAIAKRLGYISVTDV 395 (437)
T ss_dssp HHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCSCCCC-SSSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC-ChHHHHHHHHHCcCCCCCCC-CCCCCHHHHHHHcCcHHHHHH
Confidence 9999999999999999999999999999999999998 99999999999999999998 899999999999999999998
Q ss_pred HHhh
Q psy15068 638 LHLI 641 (710)
Q Consensus 638 Ll~~ 641 (710)
|...
T Consensus 396 l~~~ 399 (437)
T 1n11_A 396 LKVV 399 (437)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8664
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-63 Score=516.07 Aligned_cols=387 Identities=23% Similarity=0.319 Sum_probs=256.8
Q ss_pred cCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCC
Q psy15068 184 NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGD 263 (710)
Q Consensus 184 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~ 263 (710)
.|++++..+. .|.||||.|+..|+.+++++|++.|++++..+..+.+| ||.|+..|+.++++ +|.+.|++++..+..
T Consensus 3 ~g~~~~~~~~-~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~-L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~~ 79 (437)
T 1n11_A 3 PGISGGGGGE-SGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETP-LHMAARAGHTEVAK-YLLQNKAKVNAKAKD 79 (437)
T ss_dssp -------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCH-HHHHHHHTCHHHHH-HHHHHTCCSSCCCTT
T ss_pred CCCCccccCC-CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCH-HHHHHHcCCHHHHH-HHHhCCCCCCCCCCC
Confidence 4666666666 78888888888888888888888888877777777776 77777777777777 666677777777777
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhcc
Q psy15068 264 LNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSL 343 (710)
Q Consensus 264 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 343 (710)
|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.
T Consensus 80 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~--------------------------------- 126 (437)
T 1n11_A 80 DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV--------------------------------- 126 (437)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH---------------------------------
T ss_pred CCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH---------------------------------
Confidence 77788877777777777777777777777777777777777777776
Q ss_pred CCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccc
Q psy15068 344 KDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFC 423 (710)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ 423 (710)
+++++|++.+.+.+..+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 127 ---------------~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~------------- 178 (437)
T 1n11_A 127 ---------------ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN------------- 178 (437)
T ss_dssp ---------------HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS-------------
T ss_pred ---------------HHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC-------------
Confidence 6677777777777777777777777777777777777777777777766555
Q ss_pred cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST 503 (710)
Q Consensus 424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a 503 (710)
|.|||+.|+.. ++.+++++|+++|.+++.. +..|.|||++|+..|+.+++++|+++|++++..+ ..+.+| +|.|
T Consensus 179 g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~--~~g~t~--L~~A 252 (437)
T 1n11_A 179 GLTPLHVAVHH-NNLDIVKLLLPRGGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES--VQGVTP--LHLA 252 (437)
T ss_dssp CCCHHHHHHHT-TCHHHHHHHGGGTCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--TTCCCH--HHHH
T ss_pred CCCHHHHHHHc-CCHHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC--CCCCCH--HHHH
Confidence 77777777777 7777777777777777666 6677777777777777777777777777666555 455555 5555
Q ss_pred hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q psy15068 504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT 583 (710)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 583 (710)
+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..
T Consensus 253 ----------------------~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 310 (437)
T 1n11_A 253 ----------------------AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM 310 (437)
T ss_dssp ----------------------HHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSS
T ss_pred ----------------------HHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCC
Confidence 5555555555555555555555555555555555555555555555555555555555
Q ss_pred CCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHh
Q psy15068 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELM 663 (710)
Q Consensus 584 g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~ 663 (710)
|+||||+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.++|++|+++|++++.+|..|+||| ++|+..
T Consensus 311 g~t~L~~A~~~-g~~~~v~~Ll~~gad~n~~~-~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l-~~A~~~ 387 (437)
T 1n11_A 311 GYTPLHVASHY-GNIKLVKFLLQHQADVNAKT-KLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL-AIAKRL 387 (437)
T ss_dssp CCCHHHHHHHS-SCSHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHH-HHHHHT
T ss_pred CCCHHHHHHHc-CcHHHHHHHHhcCCCCCCCC-CCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHH-HHHHHc
Confidence 55555555555 55555555555555555555 5555555555555555555555555555555555555555 555555
Q ss_pred hh
Q psy15068 664 NS 665 (710)
Q Consensus 664 ~~ 665 (710)
|+
T Consensus 388 g~ 389 (437)
T 1n11_A 388 GY 389 (437)
T ss_dssp TC
T ss_pred Cc
Confidence 54
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.2e-45 Score=364.71 Aligned_cols=305 Identities=26% Similarity=0.309 Sum_probs=239.3
Q ss_pred ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccC-CCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068 54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQ-DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY 132 (710)
Q Consensus 54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~ 132 (710)
.+|.|+||.|++.|++++|++||++|+ ++|.++. .|+||||+|+..|+.++|++|+++|++++.++..+.+|++.++.
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Ga-dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCC-CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence 357788888888888888888888887 8877765 47888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHH
Q psy15068 133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVV 212 (710)
Q Consensus 133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v 212 (710)
.+...++..+++++++++..+..| .||++.|+..|+.+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~g----------------------------------------~t~l~~A~~~~~~~~~ 141 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGADVNECDFYG----------------------------------------FTAFMEAAVYGKVKAL 141 (337)
T ss_dssp HTCHHHHHHHHTTTCCTTCBCTTC----------------------------------------CBHHHHHHHTTCHHHH
T ss_pred cccchhhHHhhhccchhhhhccCC----------------------------------------CCHHHHHHHcCcHHHH
Confidence 888888888877777776655544 4555555555566666
Q ss_pred HHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCC
Q psy15068 213 ELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK-RKFDIN 291 (710)
Q Consensus 213 ~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~-~g~~~~ 291 (710)
++|+++|++++..... ..+....+..|.||||+|+..|+.++|++|++ .|++++
T Consensus 142 ~~ll~~ga~~~~~~~~-------------------------~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n 196 (337)
T 4g8k_A 142 KFLYKRGANVNLRRKT-------------------------KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196 (337)
T ss_dssp HHHHHTTCCTTCCCCC-------------------------C-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred HHHHHcCCCcchhhcc-------------------------ccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence 6666666655432221 11234456678899999999999999999996 589999
Q ss_pred CCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCC
Q psy15068 292 AQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENI 371 (710)
Q Consensus 292 ~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 371 (710)
..+..|.|+++.++..+.. . ....++++|+++|+++
T Consensus 197 ~~d~~g~t~l~~~~~~~~~--~------------------------------------------~~~~i~~lLl~~gad~ 232 (337)
T 4g8k_A 197 ACDNMGRNALIHALLSSDD--S------------------------------------------DVEAITHLLLDHGADV 232 (337)
T ss_dssp CCCTTSCCHHHHHHHHSCT--T------------------------------------------THHHHHHHHHHTTCCT
T ss_pred ccCCCCCcHHHHHHHHcCc--c------------------------------------------cHHHHHHHHHHCCCCC
Confidence 9999999999888776654 1 1115677888899999
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCC
Q psy15068 372 NAEGDDMITPLLFAAKHCDLQSAKYLIQK-GANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450 (710)
Q Consensus 372 ~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~ 450 (710)
+.++..|.||||+|+..|+.+++++|++. |++++..+.. |+||||+|+.. ++.+++++|+++|++
T Consensus 233 n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~-------------G~TpL~~A~~~-g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 233 NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD-------------GKTALLLAVEL-KLKKIAELLCKRGAS 298 (337)
T ss_dssp TCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTT-------------SCBHHHHHHHT-TCHHHHHHHHTTSCS
T ss_pred CCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCC-------------CCCHHHHHHHc-CCHHHHHHHHHCCCC
Confidence 99999999999999999999999999985 8899988777 99999999999 999999999999998
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCch
Q psy15068 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKE 488 (710)
Q Consensus 451 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 488 (710)
++.. +||++|+.+|+.++|++|+++|++++..
T Consensus 299 ~n~~------~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 299 TDCG------DLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp STTC------CHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred CCCC------CHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 8754 6999999999999999999999998854
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.4e-45 Score=363.04 Aligned_cols=255 Identities=24% Similarity=0.286 Sum_probs=188.6
Q ss_pred ccccchhhhhhcChhhHHHHHHhhhccCCCccc-cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068 22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKS-VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ 100 (710)
Q Consensus 22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 100 (710)
.+.|+|+.|+..|+.++|++|+++|+++|.++. .|+||||.|+..|+.++|++|+++|+ +++.++..+.++++.++..
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga-~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCC-chhhhccCCCchhHHHHhc
Confidence 467999999999999999999999999998876 58999999999999999999999999 9999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHH
Q psy15068 101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISM 180 (710)
Q Consensus 101 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~ 180 (710)
+..+++..+++.+++++..|..|.||||+|+..|+.+++++|+++|++++........
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~---------------------- 160 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED---------------------- 160 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC------------------------
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccc----------------------
Confidence 9999999999999999999999999999999999999999999999998765432211
Q ss_pred HHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh-CCCCcchhhccCCChhHHHHHhcC---c-HHHHHHHHccCCC
Q psy15068 181 LIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK-CKADTNLIVKVNQEPLLFFAIESN---S-VKIVEAFLNSKNF 255 (710)
Q Consensus 181 Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~l~~A~~~~---~-~~~v~~lL~~~~~ 255 (710)
...... .|.||||.|+..|+.+++++|++ .|++++..+..+.++ ++.++..+ . ..+++ +|++.|+
T Consensus 161 -------~~~~~~-~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~-l~~~~~~~~~~~~~~i~~-lLl~~ga 230 (337)
T 4g8k_A 161 -------QERLRK-GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA-LIHALLSSDDSDVEAITH-LLLDHGA 230 (337)
T ss_dssp ----------CTT-CSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCH-HHHHHHHSCTTTHHHHHH-HHHHTTC
T ss_pred -------cccccC-CCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcH-HHHHHHHcCcccHHHHHH-HHHHCCC
Confidence 111122 67788888888888888888884 577777666666666 44333221 1 12333 4444555
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCcCCCCChHHHHHHhCC
Q psy15068 256 DVSISDGDLNSLLHKACHVGNLQIVQMLVKR-KFDINAQNRYFLPPMFFAIGMGR 309 (710)
Q Consensus 256 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~t~l~~a~~~~~ 309 (710)
+++..+..|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+
T Consensus 231 d~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~ 285 (337)
T 4g8k_A 231 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 285 (337)
T ss_dssp CTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCC
Confidence 5555555555555555555555555554442 34444444444444444443333
No 5
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.5e-44 Score=361.00 Aligned_cols=338 Identities=21% Similarity=0.218 Sum_probs=255.7
Q ss_pred HhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCC
Q psy15068 43 LQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK 122 (710)
Q Consensus 43 l~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 122 (710)
.+.+.+.+..+..+.|+||.|++.|+.+.|+.|+.....+++.+|..|+||||+|+..|+.+++++|++.|++++..|..
T Consensus 11 ~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 90 (351)
T 3utm_A 11 ADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG 90 (351)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cCCceeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC
Confidence 34444555566677888888888888888888887644478888888888888888888888888888888888888888
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHH
Q psy15068 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202 (710)
Q Consensus 123 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~ 202 (710)
|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..+ +.+++++|+++|++++..+. .+.+|++.
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~-~g~~~l~~ 163 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKN------RVEVCSLLLSHGADPTLVNC-HGKSAVDM 163 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCccccC-CCCcchHH
Confidence 888888888888888888888888888888888888888888888 88888888888888877776 78888888
Q ss_pred HHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHc---CCHHH
Q psy15068 203 AVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV---GNLQI 279 (710)
Q Consensus 203 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~---~~~~~ 279 (710)
|+..+..+.+++.... .+ +..++..+..+.++.++... ......+..|.||||+|+.. +..++
T Consensus 164 a~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~t~L~~A~~~~~~~~~~~ 229 (351)
T 3utm_A 164 APTPELRERLTYEFKG------------HS-LLQAAREADLAKVKKTLALE-IINFKQPQSHETALHCAVASLHPKRKQV 229 (351)
T ss_dssp CSSHHHHHHHHHHHHH------------HH-HHHHHHTTCHHHHHHHTTTC-CTTCCCTTTCCCHHHHHHHCCSTTHHHH
T ss_pred HhhhhhHHHHHhhhcc------------cH-HHHHHHhccHHHHHHHHHhh-cccccCCCCCCCHHHHHHHHhCccHHHH
Confidence 8877777777665531 22 77788888888888455443 34445667788999999988 55889
Q ss_pred HHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHH
Q psy15068 280 VQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQ 359 (710)
Q Consensus 280 v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (710)
+++|+++|++++..+..|.||||+|+..++. +
T Consensus 230 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~------------------------------------------------~ 261 (351)
T 3utm_A 230 AELLLRKGANVNEKNKDFMTPLHVAAERAHN------------------------------------------------D 261 (351)
T ss_dssp HHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH------------------------------------------------H
T ss_pred HHHHHHcCCCcCCcCCCCCCHHHHHHHcCCH------------------------------------------------H
Confidence 9999999999999999999999999998887 5
Q ss_pred HHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHH
Q psy15068 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439 (710)
Q Consensus 360 ~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~ 439 (710)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||+++| ..+
T Consensus 262 ~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~-------------g~tal~~a-----~~~ 323 (351)
T 3utm_A 262 VMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQ-------------GFTAAQMG-----NEA 323 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-------------SCCHHHHS-----CHH
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-------------CCChhhhh-----hHH
Confidence 666666688888888999999999999999999999999999999888777 89998886 456
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCC
Q psy15068 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD 471 (710)
Q Consensus 440 ~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~ 471 (710)
++++|.+.+... ...+.+++..|++.|+
T Consensus 324 ~~~~l~~~~~~~----~~~~~~~l~~A~~~gd 351 (351)
T 3utm_A 324 VQQILSESTPMR----TSDVDYRLLEASKAGD 351 (351)
T ss_dssp HHHHHHHC------------------------
T ss_pred HHHHHHhccccc----cCcceeehhhhhccCC
Confidence 888888877654 3456678888887763
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5e-43 Score=352.56 Aligned_cols=327 Identities=21% Similarity=0.198 Sum_probs=284.4
Q ss_pred ccccccccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHH
Q psy15068 18 KESSYRHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYM 96 (710)
Q Consensus 18 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 96 (710)
....++.++|+.|+..|+.+.+++|+.. +.+++..|..|.||||.|+..|+.++|++|++.|+ +++.++..|+||||+
T Consensus 19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 19 LTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA-DVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHH
T ss_pred eeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCcHHHH
Confidence 3456678999999999999999999975 88999999999999999999999999999999999 999999999999999
Q ss_pred HHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHH
Q psy15068 97 AILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176 (710)
Q Consensus 97 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 176 (710)
|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+..+.+|+++++..+ ..+
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~------~~~ 171 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPE------LRE 171 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHH------HHH
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhh------hHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888 888
Q ss_pred HHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhc---CcHHHHHHHHccC
Q psy15068 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIES---NSVKIVEAFLNSK 253 (710)
Q Consensus 177 ~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~---~~~~~v~~lL~~~ 253 (710)
.+.+.... .++..++..+..+.++.++..+......+..+.+| |+.|+.. +..++++ +|.+.
T Consensus 172 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~-L~~A~~~~~~~~~~~~~-~Ll~~ 236 (351)
T 3utm_A 172 RLTYEFKG-------------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETA-LHCAVASLHPKRKQVAE-LLLRK 236 (351)
T ss_dssp HHHHHHHH-------------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCH-HHHHHHCCSTTHHHHHH-HHHHT
T ss_pred HHHhhhcc-------------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCH-HHHHHHHhCccHHHHHH-HHHHc
Confidence 88776532 57888999999999999998876666666677777 9999999 6689999 88899
Q ss_pred CCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCC
Q psy15068 254 NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP 333 (710)
Q Consensus 254 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 333 (710)
|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.
T Consensus 237 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~----------------------- 293 (351)
T 3utm_A 237 GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHL----------------------- 293 (351)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-----------------------
T ss_pred CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH-----------------------
Confidence 999999999999999999999999999999999999999999999999999999988
Q ss_pred cchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhh
Q psy15068 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAF 413 (710)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~ 413 (710)
+++++|+++|++++.++..|.||+++| ..+++++|.+.+..... .
T Consensus 294 -------------------------~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~~~---~--- 338 (351)
T 3utm_A 294 -------------------------QTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMRTS---D--- 338 (351)
T ss_dssp -------------------------HHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC-------------
T ss_pred -------------------------HHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccccC---c---
Confidence 666677779999999999999999997 67888888887553211 1
Q ss_pred hhccccCccccCCHHHHHHHc
Q psy15068 414 ISDARSSDFCFRSALQYACKH 434 (710)
Q Consensus 414 ~~~~~~~~~~~~t~l~~A~~~ 434 (710)
+.+++..|++.
T Consensus 339 ----------~~~~l~~A~~~ 349 (351)
T 3utm_A 339 ----------VDYRLLEASKA 349 (351)
T ss_dssp ---------------------
T ss_pred ----------ceeehhhhhcc
Confidence 56788888776
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-42 Score=337.66 Aligned_cols=264 Identities=24% Similarity=0.344 Sum_probs=231.6
Q ss_pred ccccchhhhhhcChhhHHHHHHhhhccCCCc-cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068 22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSA-KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ 100 (710)
Q Consensus 22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 100 (710)
.+.++|+.|+..|+.+++++|+++|.+++.. +..|.||||.|+..|+.+++++|++.|+ +++.++..|.||||+|+..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHc
Confidence 3678899999999999999999999888887 7788899999999999999999999998 8899999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCcccc----------ccCCCchhHHhhhccCCC
Q psy15068 101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK----------CSMMVTPILAVSANMSED 170 (710)
Q Consensus 101 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~----------~~~~~~~l~~a~~~~~~~ 170 (710)
|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. +..|.|||+.|+..+
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~--- 159 (285)
T 1wdy_A 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG--- 159 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT---
T ss_pred CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcC---
Confidence 9999999999999999999999999999999999999999999999888776 677888899888888
Q ss_pred CCCHHHHHHHHHHc-CCCcccCCCCCCCCHHHHHHHhCC----HHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHH
Q psy15068 171 STDTNEIISMLIEN-GANVREKMPFTDFSPLHFAVVKKN----LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKI 245 (710)
Q Consensus 171 ~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~ 245 (710)
+.+++++|+++ |++++..+. .|.|||+.|+..++ .+++++|++.|++++..+..+.+| ||.|+..|+.++
T Consensus 160 ---~~~~v~~Ll~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~~~~~ 234 (285)
T 1wdy_A 160 ---HVEVLKILLDEMGADVNACDN-MGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP-LILAVEKKHLGL 234 (285)
T ss_dssp ---CHHHHHHHHHTSCCCTTCCCT-TSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCH-HHHHHHTTCHHH
T ss_pred ---CHHHHHHHHHhcCCCCCccCC-CCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcH-HHHHHHcCCHHH
Confidence 88888888887 888888777 88889988888888 888888888888888888888888 888888888888
Q ss_pred HHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCc
Q psy15068 246 VEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294 (710)
Q Consensus 246 v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 294 (710)
+++++...|++++..+..|.|||++|+..|+.+++++|+++|++++.+|
T Consensus 235 v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 235 VQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp HHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred HHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 8855555888888888888888888888888888888888888887765
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.3e-42 Score=332.36 Aligned_cols=256 Identities=27% Similarity=0.309 Sum_probs=240.8
Q ss_pred ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccc-cCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068 54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY 132 (710)
Q Consensus 54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~ 132 (710)
.+|.|+|+.|++.|+.++|++|++.++ +++.. +..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 468999999999999999999999999 88887 7889999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC---------CCCCCCHHHHH
Q psy15068 133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM---------PFTDFSPLHFA 203 (710)
Q Consensus 133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~---------~~~~~~~l~~A 203 (710)
.|+.+++++|+++|++++..+..|.|||++|+..+ +.+++++|+++|++++... ...|.|||+.|
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A 155 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG------KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155 (285)
T ss_dssp HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT------CHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhC------CHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHH
Confidence 99999999999999999999999999999999999 9999999999999988762 23789999999
Q ss_pred HHhCCHHHHHHHHhC-CCCcchhhccCCChhHHHHHhcCc----HHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHH
Q psy15068 204 VVKKNLSVVELLIKC-KADTNLIVKVNQEPLLFFAIESNS----VKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQ 278 (710)
Q Consensus 204 ~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~l~~A~~~~~----~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 278 (710)
+..|+.+++++|++. |++++..+..+.+| |+.|+..++ .++++ +|.+.|++++..+..|.||||+|+..|+.+
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~i~~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 233 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNACDNMGRNA-LIHALLSSDDSDVEAITH-LLLDHGADVNVRGERGKTPLILAVEKKHLG 233 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTCCCTTSCCH-HHHHHHCSCTTTHHHHHH-HHHHTTCCSSCCCTTSCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCH-HHHHHHccccchHHHHHH-HHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 999999999999987 99999999999998 999999999 89999 888899999999999999999999999999
Q ss_pred HHHHHHH-cCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068 279 IVQMLVK-RKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ 320 (710)
Q Consensus 279 ~v~~Ll~-~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~ 320 (710)
++++|++ .|++++..+..|.|||++|+..++. +++++|++
T Consensus 234 ~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~--~i~~~Ll~ 274 (285)
T 1wdy_A 234 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLK--KIAELLCK 274 (285)
T ss_dssp HHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCH--HHHHHHHH
T ss_pred HHHHHHhccCCCccccCCCCCcHHHHHHHcCcH--HHHHHHHH
Confidence 9999999 8999999999999999999999988 44444444
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-42 Score=346.90 Aligned_cols=326 Identities=18% Similarity=0.165 Sum_probs=246.2
Q ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCC
Q psy15068 197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGN 276 (710)
Q Consensus 197 ~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~ 276 (710)
..+|..++..|+.+.+..+++....... .+.+ +..+...|++++++ ++.. ...+..|.||||+|+..+.
T Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~g~~~~~~-~~~~-----~~~~~~g~t~L~~Aa~~~~ 106 (373)
T 2fo1_E 38 QHSLLEASYDGYIKRQRNELQHYSLYPN----PQGY-GNGNDFLGDFNHTN-LQIP-----TEPEPESPIKLHTEAAGSY 106 (373)
T ss_dssp -------------------------------------------------------------------CCCHHHHHHHSSS
T ss_pred ccccccccCCccccchhhhhhhhccccC----cccc-CCCCCccccccccc-cccc-----cCCCCCCccHHHHHhcCCc
Confidence 3467777788888888888876655431 1222 56677788888888 4432 2457788999999999554
Q ss_pred HHHHHHHHHcCCCCCCCc-CCCCChHHHHHHhCCCcHHHHHHHhhcccccCCCCCCCCcchhhhhhccCCcccccHHHHH
Q psy15068 277 LQIVQMLVKRKFDINAQN-RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIK 355 (710)
Q Consensus 277 ~~~v~~Ll~~g~~~~~~~-~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (710)
+++++|+. .+++..+ ..|.||||+|+..|+. +++++|+.
T Consensus 107 -~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~--~~v~~Ll~----------------------------------- 146 (373)
T 2fo1_E 107 -AITEPITR--ESVNIIDPRHNRTVLHWIASNSSA--EKSEDLIV----------------------------------- 146 (373)
T ss_dssp -CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCC--SCCTTHHH-----------------------------------
T ss_pred -hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCH--HHHHHHHH-----------------------------------
Confidence 78888865 4677777 7899999999999998 99999988
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHcc
Q psy15068 356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHK 435 (710)
Q Consensus 356 ~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~ 435 (710)
..++.+++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..
T Consensus 147 ---~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~-------------g~t~L~~A~~~- 209 (373)
T 2fo1_E 147 ---HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-------------ERSALHQAAAN- 209 (373)
T ss_dssp ---HHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-------------CCCHHHHHHHT-
T ss_pred ---HHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC-------------CCCHHHHHHHC-
Confidence 7888999999999999999999999999999999999999999999988777 99999999999
Q ss_pred CcHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHcC---CHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHH
Q psy15068 436 NNIEMVKLLLLHG---ADVNDTSNKPKQKPLAVAIQSG---DFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEER 509 (710)
Q Consensus 436 ~~~~~~~~Ll~~~---~~~~~~~~~~~~t~L~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~ 509 (710)
++.+++++|++++ .+++.. +..|.||||+|+..+ +.+++++|+++|++++... .
T Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~-d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~--~----------------- 269 (373)
T 2fo1_E 210 RDFGMMVYMLNSTKLKGDIEEL-DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG--A----------------- 269 (373)
T ss_dssp TCHHHHHHHTTSHHHHHTTSCC-CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCS--G-----------------
T ss_pred CCHHHHHHHHhcCccccChhhc-CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccc--c-----------------
Confidence 9999999999998 788887 899999999999998 8999999999999887543 0
Q ss_pred HhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCcHH
Q psy15068 510 KKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTAL 588 (710)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L 588 (710)
...+..+..|.||||+|+..|+.+++++|+++| ++++.+|..|+|||
T Consensus 270 --------------------------------~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 270 --------------------------------ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp --------------------------------GGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred --------------------------------cccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 012456788999999999999999999999886 99999999999999
Q ss_pred HHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068 589 HMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL 644 (710)
Q Consensus 589 ~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 644 (710)
|+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|++++++
T Consensus 318 ~~A~~~-g~~~iv~~Ll~~gad~~~~d-~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 318 MLAAQE-GRIEVVMYLIQQGASVEAVD-ATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHHHHH-TCHHHHHHHHHTTCCSSCCC-SSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred HHHHHc-CCHHHHHHHHHcCCCccCCC-CCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999999 99999999999999999999 9999999999999999999999999876
No 10
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=323.79 Aligned_cols=242 Identities=25% Similarity=0.266 Sum_probs=206.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCC
Q psy15068 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSN 456 (710)
Q Consensus 377 ~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~ 456 (710)
+|+||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.. ++.+++++|+++|++++.. +
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~-~ 66 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITAD-------------HVSPLHEACLG-GHLSCVKILLKHGAQVNGV-T 66 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTT-------------CCCHHHHHHHH-TCHHHHHHHHHTTCCTTCC-C
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-------------CCCHHHHHHHc-CCHHHHHHHHHCCCCCCCC-C
Confidence 4678888888888888888888888877776666 78888888887 7888888888888887777 7
Q ss_pred CCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHH
Q psy15068 457 KPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536 (710)
Q Consensus 457 ~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (710)
..|.||||+|+..|+.+++++|+++|++++.
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------------------------------------- 97 (261)
T 2xai_A 67 ADWHTPLFNACVSGSWDCVNLLLQHGASVQP------------------------------------------------- 97 (261)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-------------------------------------------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------------------------------------------------
Confidence 7788888888888888888888777766542
Q ss_pred HHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCC
Q psy15068 537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDG 616 (710)
Q Consensus 537 ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~ 616 (710)
+.+|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.. ++.+++++|+++|++++. +
T Consensus 98 -----------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~-~- 163 (261)
T 2xai_A 98 -----------ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACEN-QQRACVKKLLESGADVNQ-G- 163 (261)
T ss_dssp -----------SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHT-TCHHHHHHHHHHTCCTTC-C-
T ss_pred -----------CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHh-CCHHHHHHHHHcCCCCCC-C-
Confidence 23488999999999999999999999999999999999999999999 999999999999999995 5
Q ss_pred CCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh-cccccceeeh--------hHHHHhhhcccc
Q psy15068 617 KTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS-AKQLGLVHVF--------EIMKVVKNYAGE 687 (710)
Q Consensus 617 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~-~~~L~~~~g~--------~~~~~~~~~~G~ 687 (710)
..|.||||+|+..|+.+++++|+++|+|++.+|..|+||| |+|+.++. +++| ++++. ++ +++|..|.
T Consensus 164 ~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl-~~A~~~~~~~~~l-l~~~~~~~l~~~~~~--~~r~~~g~ 239 (261)
T 2xai_A 164 KGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPV-ELVPPESPLAQLF-LEREGPPSLMQLCRL--RIRKCFGI 239 (261)
T ss_dssp BTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGG-GGSCTTCTHHHHH-HHC-CCCCHHHHHHH--HHHTTSCT
T ss_pred CCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChh-hhccccccHHHHH-HhccCCccHHHHHHH--HHHHHhch
Confidence 8999999999999999999999999999999999999999 99998777 8888 87654 66 88999999
Q ss_pred hhHHHHhhhchhH
Q psy15068 688 TLIGVARKMNYSF 700 (710)
Q Consensus 688 t~l~~a~~~~~~~ 700 (710)
||+|+|.+...++
T Consensus 240 t~l~~~~~~~~p~ 252 (261)
T 2xai_A 240 QQHHKITKLVLPE 252 (261)
T ss_dssp TCGGGGGGSSSCH
T ss_pred hccccCcccCCcH
Confidence 9999999887765
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=317.29 Aligned_cols=228 Identities=22% Similarity=0.272 Sum_probs=127.4
Q ss_pred cccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhh
Q psy15068 85 EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVS 164 (710)
Q Consensus 85 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~ 164 (710)
.++..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++|++|+++|++++..+..|.|||++|+
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC 133 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 34444444444444444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred hccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHH
Q psy15068 165 ANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244 (710)
Q Consensus 165 ~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~ 244 (710)
..+ +.+++++|+++|++++... .|.|||+.|+..|+.+++++|++.|++++..+..+.+| |+.|+..|+.+
T Consensus 134 ~~~------~~~~v~~Ll~~g~~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~-L~~A~~~~~~~ 204 (285)
T 3d9h_A 134 VSG------SWDCVNLLLQHGASVQPES--DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTP-LYLACENQQRA 204 (285)
T ss_dssp HHT------CHHHHHHHHHTTCCSSCSC--TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCH-HHHHHHTTCHH
T ss_pred HcC------HHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCH-HHHHHHcCcHH
Confidence 444 4444444444444443322 35556666666666666666666666665555555555 66666666666
Q ss_pred HHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhhcccc
Q psy15068 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSI 324 (710)
Q Consensus 245 ~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~~~~~ 324 (710)
+++ +|.+.|++++. +..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+ ++. +++++|++..+.
T Consensus 205 ~v~-~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~--~~~~~Ll~~~~a 278 (285)
T 3d9h_A 205 CVK-KLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PES--PLAQLFLEREGA 278 (285)
T ss_dssp HHH-HHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTS--HHHHHHHHHC--
T ss_pred HHH-HHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--Ccc--HHHHHHHHhhcc
Confidence 666 44555556553 566677777777777777777777777777777777777777776 333 777777775454
Q ss_pred cCC
Q psy15068 325 NVN 327 (710)
Q Consensus 325 ~~~ 327 (710)
+..
T Consensus 279 ~l~ 281 (285)
T 3d9h_A 279 SLP 281 (285)
T ss_dssp ---
T ss_pred CCC
Confidence 443
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=318.51 Aligned_cols=260 Identities=21% Similarity=0.216 Sum_probs=213.5
Q ss_pred cccccccchhhhhhcChhhHHHHHHhhh-----------ccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCcccc
Q psy15068 19 ESSYRHHHLFSEIMFSEEDAFGYFLQGI-----------INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL 87 (710)
Q Consensus 19 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~-----------~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 87 (710)
.+..+.|+||+|+..|+.+.+..++..+ ..++..|..|+||||.|+..|+.++|++|++.|+ +++.++
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~-~~~~~~ 89 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGW-AVNIIT 89 (285)
T ss_dssp -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTC-CSCEEC
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcC
Confidence 4567889999999999988777765432 2367788999999999999999999999999999 999999
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhcc
Q psy15068 88 QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167 (710)
Q Consensus 88 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~ 167 (710)
..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+ .|.|||++|+..+
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g 168 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRG 168 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999988654 5999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHH
Q psy15068 168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE 247 (710)
Q Consensus 168 ~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~ 247 (710)
+.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|++.|++++. +..+.+| |++|+..++.++++
T Consensus 169 ------~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~-L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 169 ------HVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSP-LHAVVRTASEELAC 239 (285)
T ss_dssp ------CHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCH-HHHHHHTTCHHHHH
T ss_pred ------CHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCH-HHHHHHcCCHHHHH
Confidence 99999999999999998888 999999999999999999999999999985 6677777 99999999999999
Q ss_pred HHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCC
Q psy15068 248 AFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR-KFDINA 292 (710)
Q Consensus 248 ~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~ 292 (710)
+|.+.|++++..|..|.|||++|+ ++.+++++|+++ |+++..
T Consensus 240 -~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 240 -LLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp -HHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred -HHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence 788899999999999999999999 557999999998 766543
No 13
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.1e-41 Score=337.08 Aligned_cols=311 Identities=17% Similarity=0.153 Sum_probs=210.6
Q ss_pred cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL 102 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~ 102 (710)
-..+|..++..|+.+.+..++++...+. .-.+++..+...|+.+++++++.. ..+..|+||||+|+..+.
T Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~g~t~L~~Aa~~~~ 106 (373)
T 2fo1_E 37 SQHSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIPT------EPEPESPIKLHTEAAGSY 106 (373)
T ss_dssp -------------------------------------------------------------------CCCHHHHHHHSSS
T ss_pred cccccccccCCccccchhhhhhhhcccc----CccccCCCCCcccccccccccccc------CCCCCCccHHHHHhcCCc
Confidence 4466777778888888888887665543 123456667777888888877554 346778888888888554
Q ss_pred HHHHHHHHHcCCCCCCCC-CCCCCHHHHHHhcCCHHHHHHHH--------hCCCCccccccCCCchhHHhhhccCCCCCC
Q psy15068 103 YKMVTLLIHHGANVNDRD-EKGYTPLHLACYLGNKNIVKFLL--------SKKADVRAKCSMMVTPILAVSANMSEDSTD 173 (710)
Q Consensus 103 ~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll--------~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~ 173 (710)
+++++|+. .+++..| ..|.||||+|+..|+.+++++|+ ++|++++..+..|.||||+|+..+
T Consensus 107 -~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g------ 177 (373)
T 2fo1_E 107 -AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLAR------ 177 (373)
T ss_dssp -CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHT------
T ss_pred -hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcC------
Confidence 67777654 4666777 67888888888888887777665 678888888888888888888888
Q ss_pred HHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCC---CCcchhhccCCChhHHHHHhcC---cHHHHH
Q psy15068 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK---ADTNLIVKVNQEPLLFFAIESN---SVKIVE 247 (710)
Q Consensus 174 ~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~~~~~~l~~A~~~~---~~~~v~ 247 (710)
+.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|++.+ ++++..+..+.+| |++|+..+ +.++++
T Consensus 178 ~~~iv~~Ll~~ga~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~-L~~A~~~~~~~~~~~v~ 255 (373)
T 2fo1_E 178 RRRLVAYLMKAGADPTIYNK-SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA-LMIVAHNEGRDQVASAK 255 (373)
T ss_dssp CHHHHHHHHHTTCCSCCCCT-TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH-HHHHHHSCSTTHHHHHH
T ss_pred hHHHHHHHHHCCCCCcccCC-CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCH-HHHHHHhCCcchHHHHH
Confidence 88888888888888887776 7888888888888888888888877 6777777777777 88888777 788888
Q ss_pred HHHccCCCcccc--------CCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCcCCCCChHHHHHHhCCCcHHHHHHH
Q psy15068 248 AFLNSKNFDVSI--------SDGDLNSLLHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318 (710)
Q Consensus 248 ~lL~~~~~~~~~--------~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~L 318 (710)
+|.+.|++++. .+..|.||||+|+..|+.+++++|++++ ++++..+..|.||||+|+..|+.
T Consensus 256 -~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~-------- 326 (373)
T 2fo1_E 256 -LLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI-------- 326 (373)
T ss_dssp -HHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH--------
T ss_pred -HHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH--------
Confidence 77777777765 5678999999999999999999999886 99999999999999999999988
Q ss_pred hhcccccCCCCCCCCcchhhhhhccCCcccccHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLI 398 (710)
Q Consensus 319 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll 398 (710)
+++++|+++|++++.++..|.|||++|+..|+.+++++|+
T Consensus 327 ----------------------------------------~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll 366 (373)
T 2fo1_E 327 ----------------------------------------EVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 366 (373)
T ss_dssp ----------------------------------------HHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred ----------------------------------------HHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6666667789999999999999999999999999999999
Q ss_pred HcCCC
Q psy15068 399 QKGAN 403 (710)
Q Consensus 399 ~~g~~ 403 (710)
+++++
T Consensus 367 ~~~a~ 371 (373)
T 2fo1_E 367 RCRPE 371 (373)
T ss_dssp TTC--
T ss_pred hcCcc
Confidence 98875
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-40 Score=335.49 Aligned_cols=263 Identities=18% Similarity=0.196 Sum_probs=185.9
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHC
Q psy15068 368 TENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447 (710)
Q Consensus 368 ~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~ 447 (710)
+.+.+..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.. ++.+++++|+++
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~ 75 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRF-------------GCTALHLACKF-GCVDTAKYLASV 75 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-------------CCCHHHHHHHH-CCHHHHHHHHHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC-------------CCcHHHHHHHc-CCHHHHHHHHHC
Confidence 3456778889999999999999999999999999999988877 99999999999 999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHc----CCCCCc-----------------hhhccchHHHHhhhhhhhH
Q psy15068 448 GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY----GAQIDK-----------------ENYLKNKEAARIAHSTTEL 506 (710)
Q Consensus 448 ~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~-----------------~~~~~~~~~~~~l~~a~~~ 506 (710)
|++++ ...|.||||+|+..|+.+++++|++. |++++. .+ ..+.+| +|.|
T Consensus 76 g~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~t~--L~~A--- 145 (364)
T 3ljn_A 76 GEVHS---LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH--CKGQTA--LHWC--- 145 (364)
T ss_dssp CCCCC---CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE--ESCCCH--HHHH---
T ss_pred CCCcc---ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC--CCCCCH--HHHH---
Confidence 99765 45799999999999999999999998 666554 33 455555 6666
Q ss_pred HHHHhhhHHHhhhHHHHHhhhcC--chHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----Ccc
Q psy15068 507 EERKKINDLLKLNLDFLKNVRSN--KYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD-----VNF 579 (710)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~ 579 (710)
+..+ +.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++ ++.
T Consensus 146 -------------------~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 206 (364)
T 3ljn_A 146 -------------------VGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY 206 (364)
T ss_dssp -------------------HHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC
T ss_pred -------------------HHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc
Confidence 5555 56666666666666666666666666666666666666666666655 666
Q ss_pred cCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhcccc------------
Q psy15068 580 KSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFAS------------ 647 (710)
Q Consensus 580 ~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------ 647 (710)
.|..|+||||+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.
T Consensus 207 ~~~~g~t~L~~A~~~-g~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 284 (364)
T 3ljn_A 207 ANKQGNSHLHWAILI-NWEDVAMRFVEMGIDVNMED-NEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVL 284 (364)
T ss_dssp CCTTCCCTTHHHHTT-TCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBC
T ss_pred cCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccccc
Confidence 666666666666665 66666666666666666666 6666666666666666666666666555432
Q ss_pred CCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068 648 VTNPYDPNVYHRIELMNS---AKQLGLVHVFEI 677 (710)
Q Consensus 648 ~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~ 677 (710)
.+..|+||+ +.|+..++ +..| ++.+++.
T Consensus 285 ~~~~~~~~l-~~aa~~~~~~~v~~l-l~~~~~~ 315 (364)
T 3ljn_A 285 PDRVVWLDF-VPAAADPSKQEVLQL-LQEKLDE 315 (364)
T ss_dssp GGGCCCCTT-SCSSCCHHHHHHHHH-HHHHHHH
T ss_pred ccccccccc-hhhhhccCHHHHHHH-HHHHHHH
Confidence 344555666 66665554 4445 5555544
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=3.7e-40 Score=332.04 Aligned_cols=244 Identities=18% Similarity=0.108 Sum_probs=229.9
Q ss_pred ccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhh
Q psy15068 421 DFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIA 500 (710)
Q Consensus 421 ~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l 500 (710)
|..|.||||+|+.. |+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++. ..+.+| +
T Consensus 17 d~~g~t~L~~Aa~~-g~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----~~g~t~--L 88 (364)
T 3ljn_A 17 DDENMEKIHVAARK-GQTDEVRRLIETGVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVHSL----WHGQKP--I 88 (364)
T ss_dssp CHHHHHHHHHHHHH-TCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC----BTTBCH--H
T ss_pred CCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc----cCCCCH--H
Confidence 33499999999999 9999999999999999988 99999999999999999999999999997664 468889 9
Q ss_pred hhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhc----CCcccc-----------------cCCCCCcHHHHHH
Q psy15068 501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIED----GACVNV-----------------SSERRGSALIYVA 559 (710)
Q Consensus 501 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~----~~~~~~-----------------~~~~g~t~L~~A~ 559 (710)
|.| +..++.+++++|++. |.+++. .+..|.||||+|+
T Consensus 89 ~~A----------------------~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 146 (364)
T 3ljn_A 89 HLA----------------------VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCV 146 (364)
T ss_dssp HHH----------------------HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHH
T ss_pred HHH----------------------HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHH
Confidence 999 999999999999998 888877 8889999999999
Q ss_pred HcC--CHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCC-----CCCCCCCCCCCHhHHHHhCCCh
Q psy15068 560 WKG--YEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY-----YDMKDGKTGKTPLKHAEAGKNR 632 (710)
Q Consensus 560 ~~~--~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~-----~~~~~~~~g~t~L~~A~~~~~~ 632 (710)
..| +.+++++|+++|++++..|..|.||||+|+.. |+.+++++|+++|++ ++..+ ..|.||||+|+..|+.
T Consensus 147 ~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~~~~~~~~~~-~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 147 GLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEF-RNREALDLMMDTVPSKSSLRLDYAN-KQGNSHLHWAILINWE 224 (364)
T ss_dssp HSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHCSCSSSCCTTCCC-TTCCCTTHHHHTTTCH
T ss_pred HcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHhcccccccccccccC-CCCCcHHHHHHHcCCH
Confidence 999 99999999999999999999999999999999 999999999999999 99999 9999999999999999
Q ss_pred hHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHh------------hhcccchhHHHHhhhc
Q psy15068 633 DIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVV------------KNYAGETLIGVARKMN 697 (710)
Q Consensus 633 ~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~------------~~~~G~t~l~~a~~~~ 697 (710)
++|++|+++|+++|.+|..|.||| |+|+..|+ +++| +++|+++ +. .+..|+|||++|+..|
T Consensus 225 ~~v~~Ll~~gad~~~~d~~g~tpL-~~A~~~g~~~~v~~L-l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 225 DVAMRFVEMGIDVNMEDNEHTVPL-YLSVRAAMVLLTKEL-LQKTDVF--LIQACPYHNGTTVLPDRVVWLDFVPAAADP 300 (364)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHH-HHHHHTCCHHHHHHH-HHHSCHH--HHHTCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHH-HHHHHhChHHHHHHH-HHcCCch--hhhcCcccCcccccccccccccchhhhhcc
Confidence 999999999999999999999999 99999999 9999 9999988 55 6678899999999998
Q ss_pred hhH
Q psy15068 698 YSF 700 (710)
Q Consensus 698 ~~~ 700 (710)
+.+
T Consensus 301 ~~~ 303 (364)
T 3ljn_A 301 SKQ 303 (364)
T ss_dssp HHH
T ss_pred CHH
Confidence 754
No 16
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=306.87 Aligned_cols=247 Identities=22% Similarity=0.229 Sum_probs=133.0
Q ss_pred chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068 56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN 135 (710)
Q Consensus 56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~ 135 (710)
|+||||.|+..|+.++|++|++.|+ +++.++..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGW-AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTC-CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 4455555555555555555555554 555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068 136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215 (710)
Q Consensus 136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 215 (710)
.+++++|+++|++++. +..|.|||++|+..+ +.+++++|+++|++++..+. .|.||||.|+..|+.+++++|
T Consensus 82 ~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 82 WDCVNLLLQHGASVQP-ESDLASPIHEAARRG------HVECVNSLIAYGGNIDHKIS-HLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp HHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC------cHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHHhCCHHHHHHH
Confidence 5555555555555443 223455555555555 55555555555555554444 555555555555555555555
Q ss_pred HhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----
Q psy15068 216 IKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDI----- 290 (710)
Q Consensus 216 l~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~----- 290 (710)
++.|++++. +..+.+| ||+|+..++.++++ +|.+.|++++..|..|.|||++|+..+ +++++|++++...
T Consensus 154 l~~g~~~~~-~~~g~t~-Lh~A~~~~~~~~v~-~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~ 228 (261)
T 2xai_A 154 LESGADVNQ-GKGQDSP-LHAVARTASEELAC-LLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQL 228 (261)
T ss_dssp HHHTCCTTC-CBTTBCH-HHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHH
T ss_pred HHcCCCCCC-CCCCCCh-HHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHH
Confidence 555555553 3444444 55555555555555 444555566666666666666666433 3566666655432
Q ss_pred ---CCCcCCCCChHHHHHHhCCCcHHHHHHH
Q psy15068 291 ---NAQNRYFLPPMFFAIGMGRKHTHVAEYL 318 (710)
Q Consensus 291 ---~~~~~~~~t~l~~a~~~~~~~~~~~~~L 318 (710)
+.++..|.|+++.+...... +.++.+
T Consensus 229 ~~~~~r~~~g~t~l~~~~~~~~p--~~l~~~ 257 (261)
T 2xai_A 229 CRLRIRKCFGIQQHHKITKLVLP--EDLKQF 257 (261)
T ss_dssp HHHHHHTTSCTTCGGGGGGSSSC--HHHHHH
T ss_pred HHHHHHHHhchhccccCcccCCc--HHHHHH
Confidence 34566777777777766554 444433
No 17
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.1e-39 Score=312.13 Aligned_cols=264 Identities=18% Similarity=0.119 Sum_probs=189.2
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHC
Q psy15068 371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGAN---VNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLH 447 (710)
Q Consensus 371 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~ 447 (710)
++.++..|.||||+|+..|+.+++++|++.|++ ++..+.. |.||||+|+.. ++.+++++|+++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~ 67 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL-------------GQTALHLAAIL-GEASTVEKLYAA 67 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTT-------------SCCHHHHHHHH-TCHHHHHHHHHT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCC-------------CCCHHHHHHHc-CCHHHHHHHHHc
Confidence 467889999999999999999999999999988 5555555 99999999999 999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhh
Q psy15068 448 GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR 527 (710)
Q Consensus 448 ~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 527 (710)
|++++.. +..|.||||+|+..|+.+++++|+++|++..... ...... ...... ..............
T Consensus 68 ga~~~~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~~~~~----~~~~~~------~~~~~~~~~~~~~~ 134 (282)
T 1oy3_D 68 GAGVLVA-ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDA--SDTYLT----QSQDCT------PDTSHAPAAVDSQP 134 (282)
T ss_dssp TCCSSCC-CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------
T ss_pred CCCCCCC-CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhh--HHHHhh----cccccC------cchhcchhhhcccc
Confidence 9999988 8999999999999999999999999998754322 111000 000000 00000000000122
Q ss_pred cCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHhcCCchHHHHHHHH
Q psy15068 528 SNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT-GFTALHMACRFHSNDNIVRKLLH 606 (710)
Q Consensus 528 ~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~v~~Ll~ 606 (710)
.........+...+.+++..+..|.||||+|+..|+.+++++|+++|++++..+.. |+||||+|+.. ++.+++++|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~ 213 (282)
T 1oy3_D 135 NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA-QAASVLELLLK 213 (282)
T ss_dssp ---------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHH
T ss_pred ccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc-CCHHHHHHHHH
Confidence 22334445555567778888888888888888888888888888888888888754 88888888888 88888888888
Q ss_pred cCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhh
Q psy15068 607 HGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMN 664 (710)
Q Consensus 607 ~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~ 664 (710)
+|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||| ++|....
T Consensus 214 ~gad~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl-~~a~~~~ 269 (282)
T 1oy3_D 214 AGADPTARM-YGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPC-SSSGSDS 269 (282)
T ss_dssp TTCCTTCCC-TTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred cCCCCcccc-cCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccc-cccCCcc
Confidence 888888888 8888888888888888888888888888888888888888 8877543
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.3e-39 Score=303.70 Aligned_cols=229 Identities=21% Similarity=0.236 Sum_probs=141.4
Q ss_pred cCCCccccchhHHHHHHhcC-------------CHHHHHHHHhcCCCCCc-cccCCCCcHHHHHHHcCcHHHHHHHHHcC
Q psy15068 48 NSSSAKSVELTLLCSAVWDN-------------KIREVEFLLSTGDHDVN-EKLQDGRTALYMAILQGLYKMVTLLIHHG 113 (710)
Q Consensus 48 ~~~~~~~~~~t~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 113 (710)
++|.+|.+|.||||.|+..| +.+++++|++.|+ +++ ..+..|+||||+|+..|+.+++++|++.|
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 80 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEAS 80 (253)
T ss_dssp ---------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 57778888888888888876 7888888888888 554 45778888888888888888888888888
Q ss_pred CCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCC-CccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068 114 ANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKA-DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM 192 (710)
Q Consensus 114 ~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 192 (710)
++++..|..|.||||+|+..|+.+++++|+++|+ +++..+..|.|||++|+..+ +.+++++|+++|++++..+
T Consensus 81 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~d 154 (253)
T 1yyh_A 81 ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA------VEGMLEDLINSHADVNAVD 154 (253)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT------CSSHHHHHHHTTCCTTCBC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC------hHHHHHHHHHcCCCCCCcC
Confidence 8888888888888888888888888888888876 77777777777777777777 7777777777777777666
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHH
Q psy15068 193 PFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKAC 272 (710)
Q Consensus 193 ~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~ 272 (710)
. .|.||||.|+..|+.+++++|+++|++++..+..+.+| |+.|+..|+.++++ +|.+.|++++..+..|.|||++|+
T Consensus 155 ~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tp-L~~A~~~~~~~~v~-~Ll~~ga~~~~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 155 D-LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP-LFLAAREGSYETAK-VLLDHFANRDITDHMDRLPRDIAQ 231 (253)
T ss_dssp T-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH-HHHHHHHTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred C-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH-HHHHHHCCCHHHHH-HHHHcCCCccccccCCCCHHHHHH
Confidence 5 67777777777777777777777777766666656555 66666666666666 555556666666666666666666
Q ss_pred HcCCHHHHHHHHHc
Q psy15068 273 HVGNLQIVQMLVKR 286 (710)
Q Consensus 273 ~~~~~~~v~~Ll~~ 286 (710)
..|+.+++++|.+.
T Consensus 232 ~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 232 ERMHHDIVRLLDLE 245 (253)
T ss_dssp HTTCHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHH
Confidence 66666666666544
No 19
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.3e-38 Score=302.48 Aligned_cols=219 Identities=23% Similarity=0.226 Sum_probs=115.9
Q ss_pred CCCCCCCCCCcHHHHHHHcC-------------CHHHHHHHHHcCCCCCch-hhhhhhhhccccCccccCCHHHHHHHcc
Q psy15068 370 NINAEGDDMITPLLFAAKHC-------------DLQSAKYLIQKGANVNLT-ETQKAFISDARSSDFCFRSALQYACKHK 435 (710)
Q Consensus 370 ~~~~~~~~~~t~L~~A~~~~-------------~~~~~~~Ll~~g~~~~~~-~~~~~~~~~~~~~~~~~~t~l~~A~~~~ 435 (710)
++|.++..|.||||+|+..| +.+++++|++.|++++.. +.. |.||||+|+..
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~-------------g~t~L~~A~~~- 67 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRT-------------GETALHLAARY- 67 (253)
T ss_dssp --------------------------------------------------CCCTT-------------SCCHHHHHHHT-
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCC-------------CCcHHHHHHHc-
Confidence 67889999999999999977 677777777777766532 333 77777777777
Q ss_pred CcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCC-CCCchhhccchHHHHhhhhhhhHHHHHhhhH
Q psy15068 436 NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA-QIDKENYLKNKEAARIAHSTTELEERKKIND 514 (710)
Q Consensus 436 ~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 514 (710)
++.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++++. +++
T Consensus 68 g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---------------------------- 118 (253)
T 1yyh_A 68 SRSDAAKRLLEASADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATDLD---------------------------- 118 (253)
T ss_dssp TCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT----------------------------
T ss_pred CCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc----------------------------
Confidence 7777777777777777766 6777777777777777777777777664 444
Q ss_pred HHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhc
Q psy15068 515 LLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRF 594 (710)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 594 (710)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..
T Consensus 119 -------------------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 119 -------------------------------ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 167 (253)
T ss_dssp -------------------------------CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred -------------------------------ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4445555666666666666666666666666666665666666666665
Q ss_pred CCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068 595 HSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS 665 (710)
Q Consensus 595 ~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~ 665 (710)
++.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||| |+|+.+|+
T Consensus 168 -~~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~g~ 235 (253)
T 1yyh_A 168 -NNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR-DIAQERMH 235 (253)
T ss_dssp -TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH-HHHHHTTC
T ss_pred -CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHH-HHHHHcCC
Confidence 56666666666666666555 5566666666666666666666666666666666666666 66666655
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2e-37 Score=292.05 Aligned_cols=228 Identities=22% Similarity=0.308 Sum_probs=175.6
Q ss_pred ccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCH
Q psy15068 47 INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTP 126 (710)
Q Consensus 47 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~ 126 (710)
.+++..|..|.||||.|+..|+.+++++|+++|+ +++..+..|+||||+|+..|+.+++++|++.|++++..+..|.||
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 80 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGA-NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTC 80 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCH
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCC-CcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcH
Confidence 4667778888888888888888888888888888 888888888888888888888888888888888888888888888
Q ss_pred HHHHHhcCCHHHHHHHHhCC-CCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHH
Q psy15068 127 LHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVV 205 (710)
Q Consensus 127 L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~ 205 (710)
||+|+..|+.+++++|+++| .+++..+..|.|||++|+..+ +.+++++|+++|++++..+. .|.||||.|+.
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 153 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK------HVDLVKLLLSKGSDINIRDN-EENICLHWAAF 153 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCCCccCC-CCCCHHHHHHH
Confidence 88888888888888888887 777777777777777777777 77777777777777776666 77777777777
Q ss_pred hCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068 206 KKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV 284 (710)
Q Consensus 206 ~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll 284 (710)
.|+.+++++|++.|++++..+..+.+| |+.|+..++.++++ +|.+.|++++..+..|.|||++|+..++...+..|+
T Consensus 154 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 154 SGCVDIAEILLAAKCDLHAVNIHGDSP-LHIAARENRYDCVV-LFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HCCHHHHHHHHTTTCCTTCCCTTCCCH-HHHHHHTTCHHHHH-HHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCcCCCCCCH-HHHHHHhCCHhHHH-HHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 777777777777777776666666666 66666666666666 555666666666666666666666666665444443
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.9e-38 Score=297.25 Aligned_cols=229 Identities=25% Similarity=0.264 Sum_probs=168.4
Q ss_pred CCccccchhHHHHHHhcCCHHHHHHHHh----cCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy15068 50 SSAKSVELTLLCSAVWDNKIREVEFLLS----TGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYT 125 (710)
Q Consensus 50 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t 125 (710)
+.+|.+|.||||.|+..|+.+++++|++ .+. +++.++..|+||||+|+..|+.+++++|++.|++++..+..|.|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGR-ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCC-CCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 4567788888888888888888888886 566 88888888888888888888888888888888888888888888
Q ss_pred HHHHHHhcCCHHHHHHHHhCCC----CccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHH
Q psy15068 126 PLHLACYLGNKNIVKFLLSKKA----DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH 201 (710)
Q Consensus 126 ~L~~A~~~g~~~iv~~Ll~~g~----~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~ 201 (710)
|||+|+..|+.+++++|+++++ +++..+..|.|||++|+..+ +.+++++|+++|++++..+...|.||||
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~~~g~t~L~ 155 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE------CQETVQLLLERGADIDAVDIKSGRSPLI 155 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT------CHHHHHHHHHTTCCTTCCCTTTCCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcC------CHHHHHHHHHcCCCcccccccCCCcHHH
Confidence 8888888888888888888876 66777777777777777777 7777777777777777666336777777
Q ss_pred HHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHH
Q psy15068 202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ 281 (710)
Q Consensus 202 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~ 281 (710)
.|+..|+.+++++|+++|++++..+..+.+| ||+|+..|+.++++ +|.+.|++++..+..|.|||++|+..|+.++++
T Consensus 156 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~ 233 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQHGANVNAQMYSGSSA-LHSASGRGLLPLVR-TLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 233 (241)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCBCTTSCBH-HHHHHHHTCHHHHH-HHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH-HHHHHHcCCHHHHH-HHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHh
Confidence 7777777777777777777776666666666 66666666666666 555666666666666666666666666666666
Q ss_pred HHHHcC
Q psy15068 282 MLVKRK 287 (710)
Q Consensus 282 ~Ll~~g 287 (710)
.|.+++
T Consensus 234 ~l~~~~ 239 (241)
T 1k1a_A 234 GKATRP 239 (241)
T ss_dssp C-----
T ss_pred hhccCC
Confidence 666554
No 22
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=302.08 Aligned_cols=226 Identities=20% Similarity=0.248 Sum_probs=178.1
Q ss_pred CccccCCHHHHHHHccCcHHHHHHHHHCCCCC--------CCCCCCCCCCHHHHHHHcCCH-hHHHHHHHcCCCCCchhh
Q psy15068 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADV--------NDTSNKPKQKPLAVAIQSGDF-QIVKELQNYGAQIDKENY 490 (710)
Q Consensus 420 ~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~--------~~~~~~~~~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~ 490 (710)
.|+.+.+||+.|+.. |+.++|++|++.|.+. +.. +..+.|||+.|+..+.. .++++|++.|++++..+
T Consensus 7 kd~~~~~~L~~A~~~-G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d- 83 (269)
T 4b93_B 7 KDYREVEKLLRAVAD-GDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS- 83 (269)
T ss_dssp CCCHHHHHHHHHHHT-TCHHHHHHHHTCC-----------------------------------------CCCCTTCCC-
T ss_pred cCccchhHHHHHHHc-CCHHHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC-
Confidence 445578999999999 9999999999998763 233 66789999999988765 58899999999999999
Q ss_pred ccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHH
Q psy15068 491 LKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLL 570 (710)
Q Consensus 491 ~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 570 (710)
..|.|| +|.| +..++.+++++|++.|++++..+..|.||+|.|+..++.+++++|
T Consensus 84 -~~G~Tp--Lh~A----------------------~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~L 138 (269)
T 4b93_B 84 -QDGSSP--LHVA----------------------ALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCL 138 (269)
T ss_dssp -TTSCCH--HHHH----------------------HHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred -CCCCCH--HHHH----------------------HHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHH
Confidence 999999 9999 999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCC
Q psy15068 571 LDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTN 650 (710)
Q Consensus 571 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 650 (710)
+++|++++.+|..|+||||+|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.++|++|+++|+|+|.+|.
T Consensus 139 l~~g~~~n~~d~~g~TpL~~A~~~-g~~~~v~~Ll~~gadvn~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 216 (269)
T 4b93_B 139 LDSNAKPNKKDLSGNTPLIYACSG-GHHELVALLLQHGASINASN-NKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216 (269)
T ss_dssp HHTTCCSCCCCTTCCCHHHHHHHT-TCGGGHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHC-CCHHHHHHHHHCCCCCCccc-cCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 999999999999999999999999 99999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCchhhHHHHhhh----cccccceeehhH
Q psy15068 651 PYDPNVYHRIELMNS----AKQLGLVHVFEI 677 (710)
Q Consensus 651 ~g~t~L~~~A~~~~~----~~~L~~~~g~~~ 677 (710)
.|+||| |+|+.+++ ++.| .+.++++
T Consensus 217 ~G~TpL-~~A~~~~~i~~lL~~l-~~~~~~~ 245 (269)
T 4b93_B 217 RQRTAV-DCAEQNSKIMELLQVV-PSCVASL 245 (269)
T ss_dssp TSCCSG-GGSCTTCHHHHHTTC---------
T ss_pred CCCCHH-HHHHhCCcHHHHHHHH-HHhchhh
Confidence 999999 99998888 3444 4445444
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1e-37 Score=295.06 Aligned_cols=223 Identities=20% Similarity=0.176 Sum_probs=156.4
Q ss_pred CccccCCHHHHHHHccCcHHHHHHHHH----CCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchH
Q psy15068 420 SDFCFRSALQYACKHKNNIEMVKLLLL----HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE 495 (710)
Q Consensus 420 ~~~~~~t~l~~A~~~~~~~~~~~~Ll~----~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 495 (710)
.|..|.||||+|+.. |+.+++++|++ .+.+++.. +..|.||||+|+..|+.+++++|+++|++++..+ ..+.
T Consensus 5 ~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~g~ 80 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQ-GNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD--RHGQ 80 (241)
T ss_dssp --CTTCCHHHHHHHT-TCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--TTSC
T ss_pred cCCCCCcHHHHHHHc-CCHHHHHHHHHHHHhcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC--CCCC
Confidence 455589999999999 99999998887 78888887 8889999999999999999999999888877666 5666
Q ss_pred HHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCC----cccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068 496 AARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA----CVNVSSERRGSALIYVAWKGYEEIVDLLL 571 (710)
Q Consensus 496 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 571 (710)
+| +|.| +..++.+++++|++.+. +++..+..|.||||+|+..|+.+++++|+
T Consensus 81 t~--l~~A----------------------~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 136 (241)
T 1k1a_A 81 TA--AHLA----------------------CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLL 136 (241)
T ss_dssp CH--HHHH----------------------HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CH--HHHH----------------------HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHH
Confidence 66 6666 66666666666666655 55666666666666666666666666666
Q ss_pred HcCCCCcccC-CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCC
Q psy15068 572 DNGADVNFKS-ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTN 650 (710)
Q Consensus 572 ~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 650 (710)
++|++++..+ ..|.||||+|+.. ++.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 137 ~~g~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 137 ERGADIDAVDIKSGRSPLIHAVEN-NSLSMVQLLLQHGANVNAQM-YSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC 214 (241)
T ss_dssp HTTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HcCCCcccccccCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCC
Confidence 6666666666 5666666666666 66666666666666666666 6666666666666666666666666666666666
Q ss_pred CCCCchhhHHHHhhh---cccccceee
Q psy15068 651 PYDPNVYHRIELMNS---AKQLGLVHV 674 (710)
Q Consensus 651 ~g~t~L~~~A~~~~~---~~~L~~~~g 674 (710)
.|+||| |+|+..|+ ++.| .+.+
T Consensus 215 ~g~tpl-~~A~~~~~~~i~~~l-~~~~ 239 (241)
T 1k1a_A 215 HNDTPL-MVARSRRVIDILRGK-ATRP 239 (241)
T ss_dssp TSCCTT-TTCSSHHHHHHHTC------
T ss_pred CCCCHH-HHHHhcCcHHHHhhh-ccCC
Confidence 666666 66666666 5555 4444
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.8e-38 Score=303.78 Aligned_cols=253 Identities=22% Similarity=0.172 Sum_probs=196.9
Q ss_pred CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCC---CccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy15068 49 SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHD---VNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYT 125 (710)
Q Consensus 49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t 125 (710)
++..|..|+||||.|+..|+.++|++|++.++ + ++.++..|+||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSA-GHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHT-TSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 35678899999999999999999999999988 6 7888999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHhCCCCcccc-------------ccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068 126 PLHLACYLGNKNIVKFLLSKKADVRAK-------------CSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM 192 (710)
Q Consensus 126 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~-------------~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 192 (710)
|||+|+..|+.+++++|+++|++.... ...+.++++.+..... .......+...+.+++..+
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 155 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNP-----ENEEEPRDEDWRLQLEAEN 155 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------------CCCGGGGTTCCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcccccc-----chhhhhhhhhhhhcCCCcC
Confidence 999999999999999999998774322 1223444444443331 2233444555667777777
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhcc-CCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHH
Q psy15068 193 PFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKV-NQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKA 271 (710)
Q Consensus 193 ~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A 271 (710)
. .|.||||.|+..|+.+++++|+++|++++..+.. +.+| ||+|+..|+.++++ +|++.|++++..+..|.||||+|
T Consensus 156 ~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp-L~~A~~~~~~~~v~-~Ll~~gad~~~~d~~g~tpL~~A 232 (282)
T 1oy3_D 156 Y-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLE-LLLKAGADPTARMYGGRTPLGSA 232 (282)
T ss_dssp T-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH-HHHHHHTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHH
T ss_pred C-CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCH-HHHHHHcCCHHHHH-HHHHcCCCCcccccCCCCHHHHH
Confidence 7 9999999999999999999999999999988865 7777 99999999999999 88888999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCC
Q psy15068 272 CHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRK 310 (710)
Q Consensus 272 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~ 310 (710)
+..|+.+++++|+++|++++..+..|.||+++|......
T Consensus 233 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 233 LLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HTSSCHHHHHHHHHTTCCCCCCC----------------
T ss_pred HHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 999999999999999999999999999999999876543
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.8e-37 Score=289.39 Aligned_cols=220 Identities=24% Similarity=0.300 Sum_probs=191.1
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCC
Q psy15068 369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG 448 (710)
Q Consensus 369 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~ 448 (710)
.+++.++..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+.. ++.+++++|+++|
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~-~~~~~v~~Ll~~g 67 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSED-------------QRTPLMEAAEN-NHLEAVKYLIKAG 67 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-------------CCCHHHHHHHT-TCHHHHHHHHTTT
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCC-------------CCCHHHHHHHh-CCHHHHHHHHhCC
Confidence 356777888889999999989999999999888888877766 88899988888 8888899888888
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcC-CCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhh
Q psy15068 449 ADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYG-AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR 527 (710)
Q Consensus 449 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 527 (710)
++++.. +..|.|||++|+..|+.+++++|++.| .+
T Consensus 68 ~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~------------------------------------------- 103 (237)
T 3b7b_A 68 ALVDPK-DAEGSTCLHLAAKKGHYEVVQYLLSNGQMD------------------------------------------- 103 (237)
T ss_dssp CCCCCC-CTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-------------------------------------------
T ss_pred CCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-------------------------------------------
Confidence 888877 788888888888888888888888766 33
Q ss_pred cCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHc
Q psy15068 528 SNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607 (710)
Q Consensus 528 ~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~ 607 (710)
++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.. |+.+++++|+++
T Consensus 104 ----------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~ 166 (237)
T 3b7b_A 104 ----------------VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFS-GCVDIAEILLAA 166 (237)
T ss_dssp ----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-CCHHHHHHHHTT
T ss_pred ----------------cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHC-CCHHHHHHHHHc
Confidence 345567788999999999999999999999999999999999999999998 899999999999
Q ss_pred CCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068 608 GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS 665 (710)
Q Consensus 608 g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~ 665 (710)
|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|+||| |+|+.+++
T Consensus 167 g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l-~~A~~~~~ 222 (237)
T 3b7b_A 167 KCDLHAVN-IHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPL-QCASLNSQ 222 (237)
T ss_dssp TCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHH-HHSCTTCH
T ss_pred CCCCCCcC-CCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHH-HHHHHHHH
Confidence 99999888 8899999999999999999999999999999999999999 99998887
No 26
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.9e-38 Score=303.06 Aligned_cols=242 Identities=17% Similarity=0.188 Sum_probs=222.0
Q ss_pred hcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHH
Q psy15068 32 MFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIH 111 (710)
Q Consensus 32 ~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 111 (710)
..+..++.++|.+. +++.+|..|.||||+|+..|+.++|++|++.|+ +++..+ |+||||+|+..|+.+++++|++
T Consensus 9 ~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~ 83 (285)
T 3kea_A 9 TWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGA-LKNLLE--NEFPLHQAATLEDTKIVKILLF 83 (285)
T ss_dssp GCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTG-GGSCCT--TCCHHHHHTTSSSCHHHHHHHH
T ss_pred hcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCCCCC--CCCHHHHHHHcCCHHHHHHHHH
Confidence 44566677777665 588999999999999999999999999999999 888874 9999999999999999999999
Q ss_pred cCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCC-CchhHHhhhccCCCCCCHHHHHHHHHHcCCCccc
Q psy15068 112 HGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMM-VTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190 (710)
Q Consensus 112 ~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~-~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~ 190 (710)
+|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..+ +.+++++|+++|++...
T Consensus 84 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~ 157 (285)
T 3kea_A 84 SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN------DVSIVSYFLSEIPSTFD 157 (285)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT------CHHHHHHHHTTSCTTCC
T ss_pred CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC------CHHHHHHHHhCCCcccc
Confidence 999999999999999999999999999999999999999999999 89999999999 99999999999988743
Q ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHH
Q psy15068 191 KMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270 (710)
Q Consensus 191 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~ 270 (710)
. ..|.||||.|+..|+.+++++|+++|++++..+..+.+|+|++|+..++.++++ +|.+.|++++..+. .
T Consensus 158 ~--~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~-~Ll~~gad~~~~~~-------~ 227 (285)
T 3kea_A 158 L--AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQ-ALFKYDINIYSANL-------E 227 (285)
T ss_dssp C--STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHH-HHTTSCBCSTTTTG-------G
T ss_pred c--cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHH-HHHHcCCCCCCCCh-------h
Confidence 3 278899999999999999999999999999999999998899999999999999 88899999998873 5
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCc
Q psy15068 271 ACHVGNLQIVQMLVKRKFDINAQN 294 (710)
Q Consensus 271 A~~~~~~~~v~~Ll~~g~~~~~~~ 294 (710)
|+..|+.+++++|+++|+++....
T Consensus 228 a~~~~~~~iv~~Ll~~g~~~~~~~ 251 (285)
T 3kea_A 228 NVLLDDAEIAKMIIEKHVEYKSDS 251 (285)
T ss_dssp GGTTTCHHHHHHHHHHHHHHTTCT
T ss_pred hhhcCCHHHHHHHHHcCCCCCCcc
Confidence 678999999999999998876543
No 27
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.7e-37 Score=289.83 Aligned_cols=225 Identities=29% Similarity=0.383 Sum_probs=159.6
Q ss_pred chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068 56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN 135 (710)
Q Consensus 56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~ 135 (710)
+.||||.|+..|+.+.+++|++.++..++..+..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 55677777777777777777766653456666677777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068 136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215 (710)
Q Consensus 136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 215 (710)
.+++++|+++|++++..+..|.|||++|+..+ +.+++++|+++|++++..+. .|.||||.|+..|+.+++++|
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKN------RHEIAVMLLEGGANPDAKDH-YDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcCCHHHHHHH
Confidence 77777777777777766666777777777666 66677777777666666655 677777777777777777777
Q ss_pred HhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy15068 216 IKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFD 289 (710)
Q Consensus 216 l~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~ 289 (710)
++.|++++..+..+.+| |++|+..++.++++ +|.+.|++++..+..|.|||++|+..++.+++++|+++|++
T Consensus 159 l~~g~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 159 LFYKASTNIQDTEGNTP-LHLACDEERVEEAK-FLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHTTCCSCCCCTTSCCH-HHHHHHTTCHHHHH-HHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCccccCCCCCCH-HHHHHHCCCHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 77777777666666666 77777777777777 55566777777777777777777777777777777776654
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=298.82 Aligned_cols=237 Identities=24% Similarity=0.271 Sum_probs=178.9
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCC
Q psy15068 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND 453 (710)
Q Consensus 374 ~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~ 453 (710)
+|..+.++|+.|+..|+.+++++|++.|.+....... .....+..+.|||+.|+.......++++|++.|++++.
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~-----~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~ 81 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAED-----TVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV 81 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------CCCCTTC
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccc-----cccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC
Confidence 4556679999999999999999999998764321111 12233445899999999873445689999999999998
Q ss_pred CCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHH
Q psy15068 454 TSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDE 533 (710)
Q Consensus 454 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (710)
. +..|+||||+|+..|+.+++++|++.|++++..+ ..+.+| ++.+ +..+..++
T Consensus 82 ~-d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~--~~g~t~--l~~a----------------------~~~~~~~~ 134 (269)
T 4b93_B 82 T-SQDGSSPLHVAALHGRADLIPLLLKHGANAGARN--ADQAVP--LHLA----------------------CQQGHFQV 134 (269)
T ss_dssp C-CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC--TTCCCH--HHHH----------------------HHHTCHHH
T ss_pred c-CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC--CCCCCc--cccc----------------------cccChHHH
Confidence 8 9999999999999999999999999999999988 899999 9999 88999999
Q ss_pred HHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCC
Q psy15068 534 VKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613 (710)
Q Consensus 534 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~ 613 (710)
+++|++.|++++.++..|.||||+|+..|+.+++++|+++|+++|.++..|+||||+|+.. |+.++|++|+++|++++.
T Consensus 135 ~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~-g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 135 VKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE-KHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHT-TCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHc-CCHHHHHHHHHCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred CCCCCCCCHhHHHHhCCC-hhHHHHHHhhhhc
Q psy15068 614 KDGKTGKTPLKHAEAGKN-RDIIDLLHLIDNL 644 (710)
Q Consensus 614 ~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~~ 644 (710)
++ ..|+||||+|+++++ .+++++|.+.++.
T Consensus 214 ~d-~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 214 LN-KRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp CC-TTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred cC-CCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 99 999999999988764 2333444444443
No 29
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.8e-37 Score=290.96 Aligned_cols=222 Identities=19% Similarity=0.181 Sum_probs=186.6
Q ss_pred cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST 503 (710)
Q Consensus 424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a 503 (710)
+.+||+.|+.. |+.+.++.|++.+.......+..|.||||+|+..|+.+++++|+++|++++..+ ..+.+| +|.|
T Consensus 6 ~~~~l~~A~~~-g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--~~g~t~--L~~A 80 (231)
T 3aji_A 6 SNIMICNLAYS-GKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD--DAGWSP--LHIA 80 (231)
T ss_dssp SSSHHHHHHHH-TCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC--TTSCCH--HHHH
T ss_pred ccchHHHHHHh-CCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC--CCCCCH--HHHH
Confidence 78999999999 999999999998766444448899999999999999999999999999988877 777888 8888
Q ss_pred hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Q psy15068 504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSAT 583 (710)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 583 (710)
+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..
T Consensus 81 ----------------------~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 138 (231)
T 3aji_A 81 ----------------------ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHY 138 (231)
T ss_dssp ----------------------HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ----------------------HHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 7778888888888888888888888888888888888888888888888888888888
Q ss_pred CCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHh
Q psy15068 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELM 663 (710)
Q Consensus 584 g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~ 663 (710)
|.||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..
T Consensus 139 g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l-~~A~~~ 215 (231)
T 3aji_A 139 DATAMHRAAAK-GNLKMVHILLFYKASTNIQD-TEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL-QVAKGG 215 (231)
T ss_dssp SCCHHHHHHHH-TCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH-HHSCHH
T ss_pred CCcHHHHHHHc-CCHHHHHHHHhcCCCccccC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH-HHHHhh
Confidence 88888888887 88888888888888888887 7888888888888888888888888888888888888888 888777
Q ss_pred hh---cccccceeehh
Q psy15068 664 NS---AKQLGLVHVFE 676 (710)
Q Consensus 664 ~~---~~~L~~~~g~~ 676 (710)
++ +++| .++|++
T Consensus 216 ~~~~i~~lL-~~~~a~ 230 (231)
T 3aji_A 216 LGLILKRLA-EGEEAS 230 (231)
T ss_dssp HHHHHHHHH-HHHHHC
T ss_pred HHHHHHHHH-cccccc
Confidence 76 6777 777665
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.8e-37 Score=285.48 Aligned_cols=212 Identities=19% Similarity=0.159 Sum_probs=148.3
Q ss_pred cCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhh
Q psy15068 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST 503 (710)
Q Consensus 424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a 503 (710)
|.||||.|+.. ++.+++++|++.+.+.....+..|.||||+|+..|+.+++++|+++|++++...
T Consensus 2 g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-------------- 66 (228)
T 2dzn_A 2 SNYPLHQACME-NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDD-------------- 66 (228)
T ss_dssp -CCHHHHHHHT-TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGG--------------
T ss_pred CccHHHHHHHh-CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc--------------
Confidence 78999999999 999999999999988877558999999999999999999999999996554321
Q ss_pred hhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcccC
Q psy15068 504 TELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG--ADVNFKS 581 (710)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~ 581 (710)
..+..|.||||+|+..|+.+++++|+++| ++++..+
T Consensus 67 ------------------------------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 104 (228)
T 2dzn_A 67 ------------------------------------------YPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT 104 (228)
T ss_dssp ------------------------------------------CCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCC
T ss_pred ------------------------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCC
Confidence 13445566666666666666666666665 5666666
Q ss_pred CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhh-hccccCCCCCCCchhhHH
Q psy15068 582 ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID-NLFASVTNPYDPNVYHRI 660 (710)
Q Consensus 582 ~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~~A 660 (710)
..|.||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++| ++++.+|..|+||| |+|
T Consensus 105 ~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L-~~A 181 (228)
T 2dzn_A 105 NQGVTCLHLAVGK-KWFEVSQFLIENGASVRIKD-KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL-FHA 181 (228)
T ss_dssp TTCCCHHHHHHHT-TCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHH-HHH
T ss_pred cCCCCHHHHHHHc-CCHhHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHH-HHH
Confidence 6666666666665 66666666666666666666 66666666666666666666666666 66666666666666 666
Q ss_pred HHhhh---cccccc-eeehhHHHHhhhcccchhHHHHhhhch
Q psy15068 661 ELMNS---AKQLGL-VHVFEIMKVVKNYAGETLIGVARKMNY 698 (710)
Q Consensus 661 ~~~~~---~~~L~~-~~g~~~~~~~~~~~G~t~l~~a~~~~~ 698 (710)
+..|+ +++| + ++|+++ +.+|.+|.|||++|++.+.
T Consensus 182 ~~~~~~~~v~~L-l~~~ga~~--~~~~~~g~t~l~~A~~~~~ 220 (228)
T 2dzn_A 182 LAEGHGDAAVLL-VEKYGAEY--DLVDNKGAKAEDVALNEQV 220 (228)
T ss_dssp HHTTCHHHHHHH-HHHHCCCS--CCBCTTSCBGGGGCSSTTH
T ss_pred HHcCCHHHHHHH-HHhcCCCC--CccCCCCCcHHHHHHHHHH
Confidence 66665 5666 6 556666 6666666666666655543
No 31
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=280.10 Aligned_cols=231 Identities=20% Similarity=0.197 Sum_probs=147.9
Q ss_pred CCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCC-CCCCHHH
Q psy15068 50 SSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDE-KGYTPLH 128 (710)
Q Consensus 50 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~t~L~ 128 (710)
+..|..|.|+|+.|++.|+.+++++|++.|+ +++.++..|.||||+|+..|+.+++++|++.|++++..+. .|.||||
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGY-DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCC-CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 3445556666666666666666666666665 6666666666666666666666666666666665554332 3566666
Q ss_pred HHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCC
Q psy15068 129 LACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208 (710)
Q Consensus 129 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~ 208 (710)
+|+..|+.+++++|+++|++++..+..|.|||++|+..+ +.+++++|+++|++++..+. .|.|||+.|+..++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~Ll~~~~~~~~~~~-~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG------HTSIVAYLIAKGQDVDMMDQ-NGMTPLMWAAYRTH 154 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC------HHHHHHHHHhcCCCccccCC-CCCcHHHHHHHhCC
Confidence 666666666666666666666666666666666666666 66666666666666655555 66666666665544
Q ss_pred -HHHHHHHHhCCCCcchhhc-cCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068 209 -LSVVELLIKCKADTNLIVK-VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286 (710)
Q Consensus 209 -~~~v~~Ll~~g~~~~~~~~-~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ 286 (710)
.+++++|++.|++++..+. .+.+| |+.|+..|+.++++ +|.+.|++++..+..|.|||++|++.|+.+++++|+++
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~ 232 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTA-LHWAVLAGNTTVIS-LLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEA 232 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCH-HHHHHHHTCHHHHH-HHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcH-HHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHh
Confidence 5666667777766666655 44444 77777777777776 55556677777777788888888888888888888887
Q ss_pred CCCC
Q psy15068 287 KFDI 290 (710)
Q Consensus 287 g~~~ 290 (710)
+.+.
T Consensus 233 ~~~~ 236 (240)
T 3eu9_A 233 RQAK 236 (240)
T ss_dssp C---
T ss_pred hhcc
Confidence 7654
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.9e-36 Score=292.01 Aligned_cols=239 Identities=16% Similarity=0.116 Sum_probs=195.9
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCc
Q psy15068 358 DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437 (710)
Q Consensus 358 ~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~ 437 (710)
.++.++|.+. +++.++..|.||||+|+..|+.+++++|++.|++++.. . |.||||+|+.. ++
T Consensus 13 ~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~-------------g~t~L~~A~~~-g~ 74 (285)
T 3kea_A 13 KQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--E-------------NEFPLHQAATL-ED 74 (285)
T ss_dssp HHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--T-------------TCCHHHHHTTS-SS
T ss_pred HHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--C-------------CCCHHHHHHHc-CC
Confidence 3666666665 57889999999999999999999999999999988765 2 78999999999 99
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccch-HHHHhhhhhhhHHHHHhhhHHH
Q psy15068 438 IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNK-EAARIAHSTTELEERKKINDLL 516 (710)
Q Consensus 438 ~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-~~~~~l~~a~~~~~~~~~~~~~ 516 (710)
.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++|++++..+ ..+ .+| +|.|
T Consensus 75 ~~~v~~Ll~~ga~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~--~~g~~t~--L~~A------------- 136 (285)
T 3kea_A 75 TKIVKILLFSGLDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG--KTGWKTS--FYHA------------- 136 (285)
T ss_dssp CHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCS--SSGGGSH--HHHH-------------
T ss_pred HHHHHHHHHCCCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccC--CCCCCCH--HHHH-------------
Confidence 99999999999999887 8899999999999999999999999998888777 666 677 7777
Q ss_pred hhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcH-HHHHHhcC
Q psy15068 517 KLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTA-LHMACRFH 595 (710)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-L~~A~~~~ 595 (710)
+..++.+++++|+++|.+.... ..|.||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..
T Consensus 137 ---------~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~- 205 (285)
T 3kea_A 137 ---------VMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDN- 205 (285)
T ss_dssp ---------HHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHH-
T ss_pred ---------HHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHc-
Confidence 7777888888888887665322 267788888888888888888888888888888888886 8888887
Q ss_pred CchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCC
Q psy15068 596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNP 651 (710)
Q Consensus 596 ~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 651 (710)
++.+++++|+++|++++..+ +.|+..|+.+++++|+++|++++.....
T Consensus 206 ~~~~~v~~Ll~~gad~~~~~--------~~a~~~~~~~iv~~Ll~~g~~~~~~~~~ 253 (285)
T 3kea_A 206 KDIEMLQALFKYDINIYSAN--------LENVLLDDAEIAKMIIEKHVEYKSDSYT 253 (285)
T ss_dssp TCHHHHHHHTTSCBCSTTTT--------GGGGTTTCHHHHHHHHHHHHHHTTCTTT
T ss_pred CCHHHHHHHHHcCCCCCCCC--------hhhhhcCCHHHHHHHHHcCCCCCCcccc
Confidence 88888888888888877776 2556677888888888888877655443
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=280.78 Aligned_cols=232 Identities=21% Similarity=0.224 Sum_probs=158.6
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCC
Q psy15068 371 INAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450 (710)
Q Consensus 371 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~ 450 (710)
++..+..+.++|+.|+..|+.+++++|++.|++++..+.. |.||||.|+.. ++.+++++|+++|.+
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~-~~~~~v~~Ll~~~~~ 67 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKE-------------NVTLLHWAAIN-NRIDLVKYYISKGAI 67 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-------------SCCHHHHHHHT-TCHHHHHHHHHTTCC
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCC-------------CCCHHHHHHHh-CCHHHHHHHHHcCCc
Confidence 3455667778888888888888888888888887776666 78888888888 888888888888888
Q ss_pred CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCc
Q psy15068 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK 530 (710)
Q Consensus 451 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (710)
++...+..|.|||+.|+..|+.+++++|++.|++++..
T Consensus 68 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------------------------------------------ 105 (240)
T 3eu9_A 68 VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLI------------------------------------------ 105 (240)
T ss_dssp TTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCC------------------------------------------
T ss_pred chhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCccc------------------------------------------
Confidence 77665566788888888888888888887777665544
Q ss_pred hHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCC
Q psy15068 531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY 610 (710)
Q Consensus 531 ~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~ 610 (710)
+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++..+++++|++.|++
T Consensus 106 -----------------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~ 168 (240)
T 3eu9_A 106 -----------------DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS 168 (240)
T ss_dssp -----------------CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC
T ss_pred -----------------CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC
Confidence 445556666666666666666666666666666666666666666552335666666666666
Q ss_pred CCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068 611 YDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEI 677 (710)
Q Consensus 611 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~ 677 (710)
++..+...|.||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..|+ +++| +++|++.
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l-~~A~~~~~~~~v~~L-~~~~~~~ 236 (240)
T 3eu9_A 169 VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESAL-DLAKQRKNVWMINHL-QEARQAK 236 (240)
T ss_dssp TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHH-HHHHHTTCHHHHHHH-HHHC---
T ss_pred cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH-HHHHHcCcHHHHHHH-HHhhhcc
Confidence 6666522666666666666666666666666666666666666666 66666666 6666 6655544
No 34
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-37 Score=301.31 Aligned_cols=277 Identities=21% Similarity=0.215 Sum_probs=208.3
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCCCCCCCCCCHH
Q psy15068 384 FAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPL 463 (710)
Q Consensus 384 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L 463 (710)
.++..++.+.++.++....++...... ......+..+.|||+.|+.. |+.+++++|+++|++++.. +..|.|||
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~t~l~~A~~~-g~~~~v~~Ll~~g~~~~~~-~~~g~t~L 77 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVK----RKKTKVKFDDGAVFLAACSS-GDTEEVLRLLERGADINYA-NVDGLTAL 77 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCC----CSCCCCEECHHHHHHHHHHH-TCHHHHHHHHHHCCCTTCB-CTTCCBHH
T ss_pred hHHHHHHHHHHHHHHcccccccccccc----CcccccccCCccHHHHHHHc-CCHHHHHHHHHcCCCCccc-CCCCCCHH
Confidence 355666777777777766554432221 11223344578999999999 9999999999999999988 89999999
Q ss_pred HHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCc
Q psy15068 464 AVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGAC 543 (710)
Q Consensus 464 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 543 (710)
|+|+..|+.+++++|+++|++++..+ ..|.+| +|.| +..++.+++++|+++|++
T Consensus 78 ~~A~~~g~~~~v~~Ll~~ga~~~~~~--~~g~tp--L~~A----------------------~~~g~~~~v~~Ll~~g~~ 131 (299)
T 1s70_B 78 HQACIDDNVDMVKFLVENGANINQPD--NEGWIP--LHAA----------------------ASCGYLDIAEYLISQGAH 131 (299)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCC--TTSCCH--HHHH----------------------HHHTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCcH--HHHH----------------------HHcCCHHHHHHHHhCCCC
Confidence 99999999999999999999988877 677777 7777 777777777777777777
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCH
Q psy15068 544 VNVSSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTP 622 (710)
Q Consensus 544 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 622 (710)
++..+..|.||||+|+..++.+++++++.. |.+++..+..+.++++. .++.++..+.......+..|.||
T Consensus 132 ~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~~~~~~~~~g~t~ 202 (299)
T 1s70_B 132 VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR---------DARQWLNSGHINDVRHAKSGGTA 202 (299)
T ss_dssp TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH---------HHHHHHHHTCCCCCCCTTTCCCH
T ss_pred CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHH---------HHHHHHhccCcchhhhcCCCCCH
Confidence 777777777777777777777777776654 66655433333333222 22334444444333333788888
Q ss_pred hHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccchhHHHHhhhchh
Q psy15068 623 LKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYS 699 (710)
Q Consensus 623 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~ 699 (710)
||+|+..|+.+++++|+++|+++|.+|..|+||| |+|+..|+ +++| +++|+++ +.+|..|.||||+|.+....
T Consensus 203 L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL-~~A~~~~~~~~v~~L-l~~gad~--~~~d~~g~t~l~~A~~~~~~ 278 (299)
T 1s70_B 203 LHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPL-HAAAHWGKEEACRIL-VENLCDM--EAVNKVGQTAFDVADEDILG 278 (299)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHH-HHHHHTTCHHHHHHH-HHTTCCT--TCCCTTSCCTTTSCCSGGGH
T ss_pred HHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHH-HHHHhcCCHHHHHHH-HHcCCCC--CCcCCCCCCHHHHHHHHHHH
Confidence 8888888888888888888888888888888888 88888888 8888 8888888 88888888888888776665
Q ss_pred HHHHHH
Q psy15068 700 FLERLE 705 (710)
Q Consensus 700 ~~~~~~ 705 (710)
.+..+.
T Consensus 279 ~l~~l~ 284 (299)
T 1s70_B 279 YLEELQ 284 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 35
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-35 Score=289.49 Aligned_cols=271 Identities=23% Similarity=0.260 Sum_probs=227.6
Q ss_pred hhhhcChhhHHHHHHhhhccCCC---------ccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHH
Q psy15068 29 SEIMFSEEDAFGYFLQGIINSSS---------AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAIL 99 (710)
Q Consensus 29 ~a~~~~~~~~~~~ll~~~~~~~~---------~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 99 (710)
.++..++.+.++.++.....+.. .+..|.|+|+.|+..|+.++|++|++.|+ +++..+..|+||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA-DINYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC-CTTCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHH
Confidence 46677888888888876644332 24467899999999999999999999999 999999999999999999
Q ss_pred cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHH
Q psy15068 100 QGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179 (710)
Q Consensus 100 ~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~ 179 (710)
.|+.+++++|+++|++++..|..|.||||+|+..|+.++|++|+++|++++..+..|.|||++|+..+ +.++++
T Consensus 83 ~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~ 156 (299)
T 1s70_B 83 DDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA------MEELLQ 156 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH------HHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc------hHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHc-CCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCC-CcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCcc
Q psy15068 180 MLIEN-GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKA-DTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDV 257 (710)
Q Consensus 180 ~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~ 257 (710)
.++.. +.+++.... .+.++ ....+..++..+. .....+..+.+| ||.|+..|+.++++ +|.+.|+++
T Consensus 157 ~ll~~~~~~~~~~~~-~~~~~--------~~~~~~~~l~~~~~~~~~~~~~g~t~-L~~A~~~g~~~~v~-~Ll~~g~d~ 225 (299)
T 1s70_B 157 NEVNRQGVDIEAARK-EEERI--------MLRDARQWLNSGHINDVRHAKSGGTA-LHVAAAKGYTEVLK-LLIQARYDV 225 (299)
T ss_dssp HHHHHHTCCHHHHHH-HHHHH--------HHHHHHHHHHHTCCCCCCCTTTCCCH-HHHHHHHTCHHHHH-HHHTTTCCT
T ss_pred HHHhhcCCCchhhhh-hhhhH--------HHHHHHHHHhccCcchhhhcCCCCCH-HHHHHHCCcHHHHH-HHHHcCCCC
Confidence 88754 555433221 11111 1233444455444 333445566777 99999999999999 888899999
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHHHHhCCCcHHHHHHHhh
Q psy15068 258 SISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ 320 (710)
Q Consensus 258 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~Ll~ 320 (710)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|.... . +.++.+++
T Consensus 226 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~-~--~~l~~l~~ 285 (299)
T 1s70_B 226 NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI-L--GYLEELQK 285 (299)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGG-G--HHHHHHHH
T ss_pred CCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHH-H--HHHHHHHH
Confidence 999999999999999999999999999999999999999999999996533 2 66666665
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.2e-35 Score=275.11 Aligned_cols=214 Identities=21% Similarity=0.202 Sum_probs=171.8
Q ss_pred ChhhHHHHHHhhhccCCCc-cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHc
Q psy15068 34 SEEDAFGYFLQGIINSSSA-KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH 112 (710)
Q Consensus 34 ~~~~~~~~ll~~~~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 112 (710)
|+.+++++|+++|.+++.. |..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+..|+.+++++|++.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA-DANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 6788999999999988776 7899999999999999999999999998 9999999999999999999999999999998
Q ss_pred CC-CCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccC
Q psy15068 113 GA-NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREK 191 (710)
Q Consensus 113 g~-~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~ 191 (710)
++ +++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++..
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~ 154 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN------NVDAAVVLLKNGANKDMQ 154 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT------CHHHHHHHHHTTCCTTCC
T ss_pred CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC------CHHHHHHHHHcCCCCCCc
Confidence 86 88888999999999999999999999999999998888887777777777777 777777777777777666
Q ss_pred CCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHH
Q psy15068 192 MPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKA 271 (710)
Q Consensus 192 ~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A 271 (710)
+. .|.|||+.|+..|+.+++++|+++|++++. .+..|.|||++|
T Consensus 155 ~~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-----------------------------------~~~~g~t~l~~A 198 (223)
T 2f8y_A 155 NN-REETPLFLAAREGSYETAKVLLDHFANRDI-----------------------------------TDHMDRLPRDIA 198 (223)
T ss_dssp CT-TCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------------------------------CCTTCCCHHHHH
T ss_pred CC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCcc-----------------------------------ccccCCCHHHHH
Confidence 65 667777777777777777776666665544 444555666666
Q ss_pred HHcCCHHHHHHHHHcCCCC
Q psy15068 272 CHVGNLQIVQMLVKRKFDI 290 (710)
Q Consensus 272 ~~~~~~~~v~~Ll~~g~~~ 290 (710)
+..++.+++++|+++|+..
T Consensus 199 ~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 199 QERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp HHTTCHHHHHHHHHTTCSS
T ss_pred HHhcchHHHHHHHHcCCCc
Confidence 6666666666666666543
No 37
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=3.7e-37 Score=303.21 Aligned_cols=262 Identities=12% Similarity=0.045 Sum_probs=162.2
Q ss_pred HHHHHHHhcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCchhhhhhhhh----ccccCccccCCHHHHHHHc
Q psy15068 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFIS----DARSSDFCFRSALQYACKH 434 (710)
Q Consensus 359 ~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~----~~~~~~~~~~t~l~~A~~~ 434 (710)
+++++|++.|++++..+..|.++++ |+.+++++|+++|++++.......... ..........+..|.|+..
T Consensus 33 dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~ 107 (327)
T 1sw6_A 33 DLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDS 107 (327)
T ss_dssp TCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHH
T ss_pred chHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHh
Confidence 6788899999999999999999987 899999999999988654211000000 0000111122334677776
Q ss_pred cCcHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhH
Q psy15068 435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKIND 514 (710)
Q Consensus 435 ~~~~~~~~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 514 (710)
+..+++++|++.|++++...+..|.||||+|+..|+.+++++|+++|++++..+ ..|.+| +|.|
T Consensus 108 -~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d--~~g~Tp--Lh~A----------- 171 (327)
T 1sw6_A 108 -LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD--NMGESC--LVKA----------- 171 (327)
T ss_dssp -HHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC--TTCCCH--HHHH-----------
T ss_pred -hHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC--CCCCCH--HHHH-----------
Confidence 778899999999999998338899999999999999999999999888887766 666666 6666
Q ss_pred HHhhhHHHHHhhhcCc---hHHHHHHHhcC-CcccccCCCCCcHHHHHHH----cCCHHHHHHHHHc-------------
Q psy15068 515 LLKLNLDFLKNVRSNK---YDEVKKNIEDG-ACVNVSSERRGSALIYVAW----KGYEEIVDLLLDN------------- 573 (710)
Q Consensus 515 ~~~~~~~~~~~~~~~~---~~~~~~ll~~~-~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~------------- 573 (710)
+..++ .++++.|++.+ .+++.++..|+||||+|+. .|+.+++++|++.
T Consensus 172 -----------~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 172 -----------VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp -----------HHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred -----------HHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 55444 45555555554 4566666666666666666 5666666666655
Q ss_pred -------CCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccc
Q psy15068 574 -------GADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFA 646 (710)
Q Consensus 574 -------g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 646 (710)
|++++.++..|.||||+|+. +++|+++ +++.++ ..|+||||+|+..|+.++|++|+++|+|++
T Consensus 241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~-------~~~Ll~~--~~n~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 241 QSGTNEKESKPNDKNGERKDSILENLD-------LKWIIAN--MLNAQD-SNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp EEC----------------CHHHHHCS-------HHHHHHH--TTTCCC-TTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred HhhhhcccCCcccccccCCChhHHHHH-------HHHHHHh--CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 56666666666666666653 5556555 355555 566666666666666666666666666666
Q ss_pred cCCCCCCCchhhHHHHh
Q psy15068 647 SVTNPYDPNVYHRIELM 663 (710)
Q Consensus 647 ~~~~~g~t~L~~~A~~~ 663 (710)
.+|..|+||| |+|+..
T Consensus 311 ~~d~~G~TpL-~~A~~~ 326 (327)
T 1sw6_A 311 IANKSGLRPV-DFGAGL 326 (327)
T ss_dssp CCCTTSCCGG-GGTCC-
T ss_pred ccCCCCCCHH-HHHHhc
Confidence 6666666666 666544
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4e-37 Score=302.92 Aligned_cols=257 Identities=16% Similarity=0.150 Sum_probs=209.5
Q ss_pred hhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCcc-----------------ccCCCC
Q psy15068 29 SEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE-----------------KLQDGR 91 (710)
Q Consensus 29 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------------~~~~g~ 91 (710)
.+......+++++|+++|++++..+..|.|+++ |+.++|++|+++|. +++. +.....
T Consensus 25 ~~~~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~-~~~~~~~~~a~~~~~~~~~~~~~~~~~ 98 (327)
T 1sw6_A 25 GPIITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLL-FPEIQEMPTSLNNDSSNRNSEGGSSNQ 98 (327)
T ss_dssp CCEEECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHH-C--------------------------
T ss_pred cchhhhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhcc-CCccccchHhhhcccccccccccCCcc
Confidence 333456779999999999999999999999987 99999999999997 6554 111222
Q ss_pred cHHHHHHHcCcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCC
Q psy15068 92 TALYMAILQGLYKMVTLLIHHGANVND-RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSED 170 (710)
Q Consensus 92 t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~ 170 (710)
+.+|.|+..+..+++++|++.|++++. +|..|.||||+|+..|+.++|++|+++|++++.++..|.||||+|+..+
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g--- 175 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV--- 175 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSS---
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhc---
Confidence 345888888889999999999999999 8999999999999999999999999999999999999999999999998
Q ss_pred CCCH---HHHHHHHHHcC-CCcccCCCCCCCCHHHHHHH----hCCHHHHHHHHhC--------------------CCCc
Q psy15068 171 STDT---NEIISMLIENG-ANVREKMPFTDFSPLHFAVV----KKNLSVVELLIKC--------------------KADT 222 (710)
Q Consensus 171 ~~~~---~~~~~~Ll~~~-~~~~~~~~~~~~~~l~~A~~----~~~~~~v~~Ll~~--------------------g~~~ 222 (710)
+ .++++.|++.+ .+++..+. .|.||||+|+. .|+.+++++|++. |+++
T Consensus 176 ---~~~~~~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~ 251 (327)
T 1sw6_A 176 ---NNYDSGTFEALLDYLYPCLILEDS-MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP 251 (327)
T ss_dssp ---HHHHTTCHHHHHHHHGGGGGEECT-TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC--------
T ss_pred ---ccccHHHHHHHHHhhhccccCCCC-CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc
Confidence 7 57777777776 66777777 99999999999 8999999999987 8899
Q ss_pred chhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHH
Q psy15068 223 NLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMF 302 (710)
Q Consensus 223 ~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~ 302 (710)
+..+..+.+| |+.|+. ++ +|++. +++..+..|+||||+|+..|+.++|++|+++|++++.++..|.|||+
T Consensus 252 ~~~~~~g~t~-L~~a~~------~~-~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 252 NDKNGERKDS-ILENLD------LK-WIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 321 (327)
T ss_dssp --------CH-HHHHCS------HH-HHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred ccccccCCCh-hHHHHH------HH-HHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 9999999998 999986 77 45444 68899999999999999999999999999999999999999999999
Q ss_pred HHHHhC
Q psy15068 303 FAIGMG 308 (710)
Q Consensus 303 ~a~~~~ 308 (710)
+|+..|
T Consensus 322 ~A~~~g 327 (327)
T 1sw6_A 322 FGAGLE 327 (327)
T ss_dssp GTCC--
T ss_pred HHHhcC
Confidence 998654
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=5.5e-35 Score=273.59 Aligned_cols=209 Identities=21% Similarity=0.179 Sum_probs=111.8
Q ss_pred cccchhhhhhcChhhHHHHHHhhhccCCC-ccccchhHHHHHHhcCCHHHHHHHHhcCC-CCCcc-ccCCCCcHHHHHHH
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQGIINSSS-AKSVELTLLCSAVWDNKIREVEFLLSTGD-HDVNE-KLQDGRTALYMAIL 99 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~-~~~~g~t~L~~A~~ 99 (710)
+.|||+.|+..|+.+++++|++.+.++.. .+..|.||||.|+..|+.+++++|++.++ .+++. .+..|+||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 34555555555555555555555544333 55555555555555555555555555552 03333 44555555555555
Q ss_pred cCcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHH
Q psy15068 100 QGLYKMVTLLIHHG--ANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177 (710)
Q Consensus 100 ~g~~~~v~~Ll~~g--~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ 177 (710)
.|+.+++++|++.| ++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+ +.++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~ 155 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG------SLKL 155 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT------CHHH
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC------CHHH
Confidence 55555555555555 555555555555555555555555555555555555555555555555555555 5555
Q ss_pred HHHHHHcC-CCcccCCCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCcchhhccCCChhHHHHHh
Q psy15068 178 ISMLIENG-ANVREKMPFTDFSPLHFAVVKKNLSVVELLI-KCKADTNLIVKVNQEPLLFFAIE 239 (710)
Q Consensus 178 ~~~Ll~~~-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~~~~~~l~~A~~ 239 (710)
+++|++.| ++++..+. .|.|||+.|+..|+.+++++|+ +.|++++..+..+.+| +++|+.
T Consensus 156 v~~Ll~~g~~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~-l~~A~~ 217 (228)
T 2dzn_A 156 IELLCGLGKSAVNWQDK-QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKA-EDVALN 217 (228)
T ss_dssp HHHHHTTTCCCSCCCCT-TSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBG-GGGCSS
T ss_pred HHHHHhcCcccccCcCC-CCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcH-HHHHHH
Confidence 55555555 44444444 4555555555555555555555 4454444444444444 444433
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=5e-35 Score=272.67 Aligned_cols=213 Identities=19% Similarity=0.229 Sum_probs=163.7
Q ss_pred CCHHHHHHHHhcCCCCCccc-cCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhC
Q psy15068 67 NKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145 (710)
Q Consensus 67 g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ 145 (710)
|+.+++++|++.|+ +++.. +..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++
T Consensus 2 g~~~~i~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 80 (223)
T 2f8y_A 2 DAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 80 (223)
T ss_dssp ---CCEETTEETTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHB
T ss_pred CcHHHHHHHHHcCC-CcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 67888888888888 66654 78899999999999999999999999999888888899999999999999999999888
Q ss_pred CC-CccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcch
Q psy15068 146 KA-DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL 224 (710)
Q Consensus 146 g~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~ 224 (710)
++ +++..+..+.|||++|+ ..++.+++++|++.|++++.
T Consensus 81 ~~~~~~~~~~~g~t~L~~A~----------------------------------------~~~~~~~~~~Ll~~g~~~~~ 120 (223)
T 2f8y_A 81 RATDLDARMHDGTTPLILAA----------------------------------------RLAVEGMLEDLINSHADVNA 120 (223)
T ss_dssp TTSCTTCCCTTCCCHHHHHH----------------------------------------HHTCHHHHHHHHHTTCCTTC
T ss_pred CCCCcccCCCCCCcHHHHHH----------------------------------------HhCcHHHHHHHHHcCCCCcC
Confidence 76 56555555555555554 44555555555555555554
Q ss_pred hhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHH
Q psy15068 225 IVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA 304 (710)
Q Consensus 225 ~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 304 (710)
.+..+.+| ||+|+..|+.++++ +|.+.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|
T Consensus 121 ~~~~g~t~-L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 198 (223)
T 2f8y_A 121 VDDLGKSA-LHWAAAVNNVDAAV-VLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIA 198 (223)
T ss_dssp BCTTSCBH-HHHHHHTTCHHHHH-HHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cCCCCCcH-HHHHHHcCCHHHHH-HHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHH
Confidence 44445554 55555555555555 44455666677788889999999999999999999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHhhccccc
Q psy15068 305 IGMGRKHTHVAEYLLQQDSIN 325 (710)
Q Consensus 305 ~~~~~~~~~~~~~Ll~~~~~~ 325 (710)
+..++. +++++|++ .+..
T Consensus 199 ~~~~~~--~i~~~L~~-~g~~ 216 (223)
T 2f8y_A 199 QERMHH--DIVRLLDE-YNLV 216 (223)
T ss_dssp HHTTCH--HHHHHHHH-TTCS
T ss_pred HHhcch--HHHHHHHH-cCCC
Confidence 999988 99999998 4443
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.2e-35 Score=275.44 Aligned_cols=219 Identities=22% Similarity=0.206 Sum_probs=190.0
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCC
Q psy15068 373 AEGDDMITPLLFAAKHCDLQSAKYLIQKGA----NVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG 448 (710)
Q Consensus 373 ~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~----~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~ 448 (710)
.++..|.||||+|+..|+.+++++|++.+. +++..+.. |.||||+|+.. ++.+++++|+++|
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-------------g~t~L~~A~~~-~~~~~v~~Ll~~g 68 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNL-------------QQTPLHLAVIT-NQPEIAEALLGAG 68 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTT-------------CCCHHHHHHHT-TCHHHHHCCCSCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCC-------------CCCHHHHHHHc-CCHHHHHHHHHcC
Confidence 467789999999999999999999988765 57766666 99999999999 9999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhc
Q psy15068 449 ADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRS 528 (710)
Q Consensus 449 ~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (710)
++++.. +..|.||||+|+..|+.+++++|++.|++.....
T Consensus 69 ~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~--------------------------------------- 108 (236)
T 1ikn_D 69 CDPELR-DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHS--------------------------------------- 108 (236)
T ss_dssp CCSCCC-CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSC---------------------------------------
T ss_pred CCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHH---------------------------------------
Confidence 999888 8899999999999999999999999887643221
Q ss_pred CchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHhcCCchHHHHHHHHc
Q psy15068 529 NKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSA-TGFTALHMACRFHSNDNIVRKLLHH 607 (710)
Q Consensus 529 ~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~~v~~Ll~~ 607 (710)
.++..+..|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+.. ++.+++++|+++
T Consensus 109 --------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~ 173 (236)
T 1ikn_D 109 --------------ILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDL-QNPDLVSLLLKC 173 (236)
T ss_dssp --------------GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHTT
T ss_pred --------------HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc
Confidence 1456778899999999999999999999999999999997 999999999999 999999999999
Q ss_pred CCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccc--cCCCCCCCchhhHHHH
Q psy15068 608 GAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFA--SVTNPYDPNVYHRIEL 662 (710)
Q Consensus 608 g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~L~~~A~~ 662 (710)
|++++.++ ..|.||||+|+..|+.+++++|+++|++.. .++..|.||. +.++.
T Consensus 174 ga~~~~~~-~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~-~~~~~ 228 (236)
T 1ikn_D 174 GADVNRVT-YQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESY-DTESE 228 (236)
T ss_dssp TCCSCCCC-TTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCC-CCC--
T ss_pred CCCCCccc-CCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHH-hhhcc
Confidence 99999999 999999999999999999999999999877 7899999998 66543
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.8e-33 Score=263.86 Aligned_cols=212 Identities=24% Similarity=0.262 Sum_probs=185.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCC----
Q psy15068 377 DMITPLLFAAKHCDLQSAKYLIQK-GANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADV---- 451 (710)
Q Consensus 377 ~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~---- 451 (710)
.|.||||.|+..|+.+++++|++. |++++..+.. |.||||+|+.. ++.+++++|++.|+++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~-------------g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~ 67 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAM-------------GETALHIAALY-DNLEAAMVLMEAAPELVFEP 67 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTT-------------SCCHHHHHHHT-TCHHHHHHHHHHCGGGGGCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCC-------------CCCHHHHHHHc-CCHHHHHHHHHcCchhcccc
Confidence 578999999999999999999998 9999988777 99999999999 9999999999999886
Q ss_pred -CCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCc
Q psy15068 452 -NDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK 530 (710)
Q Consensus 452 -~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (710)
+.. +..|.||||+|+..|+.+++++|+++|++++..+ .... +
T Consensus 68 ~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~~~~----~------------------------------ 110 (232)
T 2rfa_A 68 MTSE-LYEGQTALHIAVINQNVNLVRALLARGASVSARA--TGSV----F------------------------------ 110 (232)
T ss_dssp CCST-TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--CSGG----G------------------------------
T ss_pred cccc-CCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCccc--CCcc----e------------------------------
Confidence 333 6789999999999999999999999999988755 2111 0
Q ss_pred hHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHH----HHHHH
Q psy15068 531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIV----RKLLH 606 (710)
Q Consensus 531 ~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v----~~Ll~ 606 (710)
....+..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++ ++|++
T Consensus 111 ----------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~-~~~~~~~~i~~~Ll~ 179 (232)
T 2rfa_A 111 ----------HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQ-PNKTFACQMYNLLLS 179 (232)
T ss_dssp ----------SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTC-SCHHHHHHHHHHHHH
T ss_pred ----------eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CChHHHHHHHHHHHh
Confidence 012455678899999999999999999999999999999999999999999999 999888 99999
Q ss_pred cCCCC------CCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCC
Q psy15068 607 HGAYY------DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNP 651 (710)
Q Consensus 607 ~g~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 651 (710)
+|+++ +.++ ..|.||||+|+..|+.+++++|+++|.+...+...
T Consensus 180 ~g~~~~~~~~~~~~~-~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 229 (232)
T 2rfa_A 180 YDGGDHLKSLELVPN-NQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHHH 229 (232)
T ss_dssp TTCSCSSCCGGGCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHHC------
T ss_pred cCCchhhhhhhccCC-CCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhcc
Confidence 99988 4777 99999999999999999999999999987665543
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.1e-33 Score=246.75 Aligned_cols=156 Identities=33% Similarity=0.408 Sum_probs=84.2
Q ss_pred chhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHH
Q psy15068 26 HLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKM 105 (710)
Q Consensus 26 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 105 (710)
.|+.|+..|+.++|++|+++|+++|.+|..|.||||.|+..++.+++++|++.|+ +++.+|..|+||||+|+..|+.++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga-d~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc-chhhhccCCCCHHHHHHHcCCHHH
Confidence 3555555555555555555555555555555555555555555555555555555 555555555555555555555555
Q ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC
Q psy15068 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG 185 (710)
Q Consensus 106 v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~ 185 (710)
+++|+++|++++.+|..|+||||+|+..|+.++|++|+++|++++.++..|.|||++|+..+ +.+++++|+++|
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g------~~~iv~~Ll~~G 159 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG------NEEVVKLLEKQG 159 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHTC-
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC------CHHHHHHHHHCC
Confidence 55555555555555555555555555555555555555555555555555555555555555 555555555555
Q ss_pred CCc
Q psy15068 186 ANV 188 (710)
Q Consensus 186 ~~~ 188 (710)
+++
T Consensus 160 A~i 162 (169)
T 4gpm_A 160 GWL 162 (169)
T ss_dssp ---
T ss_pred CCc
Confidence 444
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.4e-33 Score=264.54 Aligned_cols=195 Identities=20% Similarity=0.284 Sum_probs=178.0
Q ss_pred ccccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCC-----ccccCCCCcHHH
Q psy15068 22 YRHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDV-----NEKLQDGRTALY 95 (710)
Q Consensus 22 ~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~g~t~L~ 95 (710)
.+.|||+.|+..|+.+++++|++. |++++.+|..|.||||.|+..|+.+++++|++.++ ++ +.++..|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP-ELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCG-GGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCc-hhccccccccCCCCcCHHH
Confidence 468999999999999999999997 99999999999999999999999999999999998 65 667789999999
Q ss_pred HHHHcCcHHHHHHHHHcCCCCCCCCC-------------CCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHH
Q psy15068 96 MAILQGLYKMVTLLIHHGANVNDRDE-------------KGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILA 162 (710)
Q Consensus 96 ~A~~~g~~~~v~~Ll~~g~~~~~~~~-------------~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~ 162 (710)
+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999988765 79999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCHHHHH----HHHHHcCCCcc------cCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcch
Q psy15068 163 VSANMSEDSTDTNEII----SMLIENGANVR------EKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL 224 (710)
Q Consensus 163 a~~~~~~~~~~~~~~~----~~Ll~~~~~~~------~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~ 224 (710)
|+..+ +.+++ ++|+++|++.. ..+. .|.|||++|+..|+.+++++|+++|+....
T Consensus 161 A~~~~------~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~-~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 161 LILQP------NKTFACQMYNLLLSYDGGDHLKSLELVPNN-QGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp HHTCS------CHHHHHHHHHHHHHTTCSCSSCCGGGCCCT-TSCCHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred HHHcC------ChHHHHHHHHHHHhcCCchhhhhhhccCCC-CCCCHHHHHHHcCCHHHHHHHHhcCccchh
Confidence 99999 88877 99999999874 4555 899999999999999999999998876543
No 45
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1e-32 Score=240.63 Aligned_cols=159 Identities=38% Similarity=0.451 Sum_probs=150.2
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHH
Q psy15068 58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN 137 (710)
Q Consensus 58 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~ 137 (710)
+.|+.||+.|+.++|++|++.|+ ++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Ga-dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGA-DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHH
Confidence 67999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHh
Q psy15068 138 IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217 (710)
Q Consensus 138 iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 217 (710)
+|++|+++|++++.++..|.||||+|+..+ +.+++++|+++|++++..+. .|.|||++|+..|+.+++++|++
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g------~~~~v~~Ll~~gad~~~~d~-~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENG------HKEVVKLLISKGADVNTSDS-DGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999999888 99999999999999999999999
Q ss_pred CCCCcch
Q psy15068 218 CKADTNL 224 (710)
Q Consensus 218 ~g~~~~~ 224 (710)
+|+++.-
T Consensus 158 ~GA~ie~ 164 (169)
T 4gpm_A 158 QGGWLEH 164 (169)
T ss_dssp C------
T ss_pred CCCCcCC
Confidence 9998753
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2e-32 Score=250.51 Aligned_cols=196 Identities=20% Similarity=0.244 Sum_probs=166.8
Q ss_pred cccccchhhhhhcChhhHHHHHHhhhc-cCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHH
Q psy15068 21 SYRHHHLFSEIMFSEEDAFGYFLQGII-NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAIL 99 (710)
Q Consensus 21 ~~~~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 99 (710)
+++.++|+.|+..|+.+.+++|++.+. +++..|..|.||||.|+..|+.++|++|++.|+ +++.++..|+||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA-DINLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHH
Confidence 467788999999999999998888775 888888889999999999999999999999988 888888889999999999
Q ss_pred cCcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCC-CCccccccCCCchhHHhhhccCCCCCCHHHH
Q psy15068 100 QGLYKMVTLLI-HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEI 177 (710)
Q Consensus 100 ~g~~~~v~~Ll-~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ 177 (710)
.|+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..+.... .+.++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~-~~~~~ 160 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ-LYQDI 160 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH-HHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh-hHHHH
Confidence 99999999888 556788888888899999999999999999999888 8888888888999999887772100 02888
Q ss_pred HHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCC
Q psy15068 178 ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK 219 (710)
Q Consensus 178 ~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g 219 (710)
+++|+++|++++..+. .|.|||++|+..|+.+++++|+++|
T Consensus 161 v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 161 VKLLMENGADQSIKDN-SGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHCCCCCCccCC-CCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 8888888888888877 8888999988888888888888876
No 47
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.1e-33 Score=265.84 Aligned_cols=206 Identities=23% Similarity=0.215 Sum_probs=171.2
Q ss_pred cccccccchhhhhhcChhhHHHHHHhhhc----cCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHH
Q psy15068 19 ESSYRHHHLFSEIMFSEEDAFGYFLQGII----NSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTAL 94 (710)
Q Consensus 19 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 94 (710)
....+.|||+.|+..|+.+++++|++.+. +++..+..|.||||.|+..|+.++|++|++.|+ +++.++..|+|||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC-DPELRDFRGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCC-CSCCCCTTCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHH
Confidence 34567899999999999999999988765 688888889999999999999999999999988 8888888999999
Q ss_pred HHHHHcCcHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCcccccc-CCCchhHHhhhcc
Q psy15068 95 YMAILQGLYKMVTLLIHHGAN------VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCS-MMVTPILAVSANM 167 (710)
Q Consensus 95 ~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-~~~~~l~~a~~~~ 167 (710)
|+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999998865 466778889999999999999999999999999888887 8888888888888
Q ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcc--hhhccCCCh
Q psy15068 168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN--LIVKVNQEP 232 (710)
Q Consensus 168 ~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~~~~ 232 (710)
+.+++++|+++|++++..+. .|.|||++|+..|+.+++++|+++|++.. .++..+.++
T Consensus 163 ------~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 222 (236)
T 1ikn_D 163 ------NPDLVSLLLKCGADVNRVTY-QGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEES 222 (236)
T ss_dssp ------CHHHHHHHHTTTCCSCCCCT-TCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTC
T ss_pred ------CHHHHHHHHHcCCCCCcccC-CCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHH
Confidence 88888888888888888877 88888888888888888888888888665 444444444
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=4e-33 Score=265.53 Aligned_cols=201 Identities=19% Similarity=0.152 Sum_probs=179.2
Q ss_pred cCCHHHHHHHccCcHH----HHHHHHHCCCCCCC---CCCCCCCCHHHHHHHc---CCHhHHHHHHHcCCCCCchhhccc
Q psy15068 424 FRSALQYACKHKNNIE----MVKLLLLHGADVND---TSNKPKQKPLAVAIQS---GDFQIVKELQNYGAQIDKENYLKN 493 (710)
Q Consensus 424 ~~t~l~~A~~~~~~~~----~~~~Ll~~~~~~~~---~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~ 493 (710)
|+||||.|+.. |+.+ ++++|+++|.+++. ..+..|.||||+|+.. |+.+++++|++.|++++..+
T Consensus 2 G~t~L~~A~~~-g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~---- 76 (256)
T 2etb_A 2 DRDRLFSVVSR-GVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK---- 76 (256)
T ss_dssp CHHHHHHHHHH-TCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS----
T ss_pred CccHHHHHHHc-CCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh----
Confidence 88999999999 9986 67788889999998 2389999999999999 99999999999887765332
Q ss_pred hHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068 494 KEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDN 573 (710)
Q Consensus 494 ~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 573 (710)
. ++. ......+..|.||||+|+..|+.+++++|+++
T Consensus 77 ------~------------------------------------~~~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 112 (256)
T 2etb_A 77 ------P------------------------------------LVN--AQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN 112 (256)
T ss_dssp ------C------------------------------------GGG--CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ------h------------------------------------hcc--cccccccccCCCHHHHHHHcCCHHHHHHHHHc
Confidence 0 000 11234557899999999999999999999999
Q ss_pred CCCCcccCCC-------------CCcHHHHHHhcCCchHHHHHHHH---cCCCCCCCCCCCCCCHhHHHHh--CCChh--
Q psy15068 574 GADVNFKSAT-------------GFTALHMACRFHSNDNIVRKLLH---HGAYYDMKDGKTGKTPLKHAEA--GKNRD-- 633 (710)
Q Consensus 574 g~~~~~~~~~-------------g~t~L~~A~~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~--~~~~~-- 633 (710)
|++++..+.. |.||||+|+.. |+.+++++|++ +|++++.++ ..|+||||+|+. .++.+
T Consensus 113 ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~~~~ga~~n~~d-~~g~TpLh~A~~~~~~~~~~~ 190 (256)
T 2etb_A 113 GADVHLRACGRFFQKHQGTCFYFGELPLSLAACT-KQWDVVTYLLENPHQPASLEATD-SLGNTVLHALVMIADNSPENS 190 (256)
T ss_dssp TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT-TCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCSCHHHH
T ss_pred CCCCCcccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhccccCCCcCccC-CCCCCHHHHHHHcccCCchhh
Confidence 9999999886 99999999999 99999999999 999999999 999999999998 88888
Q ss_pred -----HHHHHHhhhhcc-------ccCCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068 634 -----IIDLLHLIDNLF-------ASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEI 677 (710)
Q Consensus 634 -----~v~~Ll~~g~~~-------~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~ 677 (710)
++++|+++|+++ +.+|..|+||| |+|+..|+ +++| +++|++.
T Consensus 191 ~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL-~~A~~~g~~~~v~~L-l~~g~~~ 247 (256)
T 2etb_A 191 ALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPL-KLAAKEGKIEIFRHI-LQREFSG 247 (256)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcccccccccccCCCCCCHH-HHHHHhCCHHHHHHH-HhCCCCC
Confidence 999999999999 99999999999 99999999 9999 9999988
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.4e-33 Score=266.08 Aligned_cols=195 Identities=23% Similarity=0.283 Sum_probs=178.3
Q ss_pred ccccchhhhhhcChhh----HHHHHHhhhccCCC----ccccchhHHHHHHhc---CCHHHHHHHHhcCCCCCcc-----
Q psy15068 22 YRHHHLFSEIMFSEED----AFGYFLQGIINSSS----AKSVELTLLCSAVWD---NKIREVEFLLSTGDHDVNE----- 85 (710)
Q Consensus 22 ~~~~~l~~a~~~~~~~----~~~~ll~~~~~~~~----~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~----- 85 (710)
++.|+|+.|+..|+.+ ++++|+++|++++. .|..|.||||.|+.. |+.++|++|++.|+ +++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~-~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDK-DSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHH-HTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCC-cccchhhhc
Confidence 4789999999999997 66777779999998 899999999999999 99999999999988 6553
Q ss_pred ------ccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCC-------------CCCHHHHHHhcCCHHHHHHHHh--
Q psy15068 86 ------KLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK-------------GYTPLHLACYLGNKNIVKFLLS-- 144 (710)
Q Consensus 86 ------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------------~~t~L~~A~~~g~~~iv~~Ll~-- 144 (710)
+|..|+||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 3478999999999999999999999999999999886 9999999999999999999999
Q ss_pred -CCCCccccccCCCchhHHhhh--ccCCCCCCHHH-------HHHHHHHcCCCc-------ccCCCCCCCCHHHHHHHhC
Q psy15068 145 -KKADVRAKCSMMVTPILAVSA--NMSEDSTDTNE-------IISMLIENGANV-------REKMPFTDFSPLHFAVVKK 207 (710)
Q Consensus 145 -~g~~~~~~~~~~~~~l~~a~~--~~~~~~~~~~~-------~~~~Ll~~~~~~-------~~~~~~~~~~~l~~A~~~~ 207 (710)
+|++++.++..|.||||+|+. .+ +.+ ++++|+++|+++ +..+. .|.|||++|+..|
T Consensus 160 ~~ga~~n~~d~~g~TpLh~A~~~~~~------~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~-~g~tpL~~A~~~g 232 (256)
T 2etb_A 160 HQPASLEATDSLGNTVLHALVMIADN------SPENSALVIHMYDGLLQMGARLCPTVQLEEISNH-QGLTPLKLAAKEG 232 (256)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCS------CHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT-TSCCHHHHHHHTT
T ss_pred ccCCCcCccCCCCCCHHHHHHHcccC------CchhhHHHHHHHHHHHHcCCCcccccccccccCC-CCCCHHHHHHHhC
Confidence 999999999999999999998 56 777 999999999998 66776 9999999999999
Q ss_pred CHHHHHHHHhCCCCcch
Q psy15068 208 NLSVVELLIKCKADTNL 224 (710)
Q Consensus 208 ~~~~v~~Ll~~g~~~~~ 224 (710)
+.+++++|+++|++...
T Consensus 233 ~~~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 233 KIEIFRHILQREFSGAA 249 (256)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCCCCC
Confidence 99999999999876544
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=6.1e-33 Score=266.98 Aligned_cols=217 Identities=18% Similarity=0.144 Sum_probs=174.3
Q ss_pred CccccCCHHHHHHHccCcHHHHHHHHH----CCCCCCC---CCCCCCCCHHHHHHHc---CCHhHHHHHHHcCCCCCchh
Q psy15068 420 SDFCFRSALQYACKHKNNIEMVKLLLL----HGADVND---TSNKPKQKPLAVAIQS---GDFQIVKELQNYGAQIDKEN 489 (710)
Q Consensus 420 ~~~~~~t~l~~A~~~~~~~~~~~~Ll~----~~~~~~~---~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~ 489 (710)
.+..|.||||.|+.. |+.++++.|++ .+.+++. ..+..|.||||+|+.. |+.+++++|+++|++++..
T Consensus 9 ~d~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~- 86 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQ-SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL- 86 (273)
T ss_dssp --CCCHHHHHHHHHT-TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH-
T ss_pred CCcccchHHHHHHHc-CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch-
Confidence 444599999999999 99998888876 5666552 2377899999999987 9999999999988654321
Q ss_pred hccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHH
Q psy15068 490 YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDL 569 (710)
Q Consensus 490 ~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 569 (710)
+.+++. .+...+..|.||||+|+..|+.+++++
T Consensus 87 ---------------------------------------------~~~i~~--~~~~~d~~g~tpL~~A~~~g~~~~v~~ 119 (273)
T 2pnn_A 87 ---------------------------------------------KQFVNA--SYTDSYYKGQTALHIAIERRNMTLVTL 119 (273)
T ss_dssp ---------------------------------------------HHHHTC--CCCSTTTTTCCHHHHHHHTTCHHHHHH
T ss_pred ---------------------------------------------hHHhhc--ccccccCCCCCHHHHHHHcCCHHHHHH
Confidence 112221 133456789999999999999999999
Q ss_pred HHHcCCCCcccCC--------------CCCcHHHHHHhcCCchHHHHHHHH---cCCCCCCCCCCCCCCHhHHHHhCCC-
Q psy15068 570 LLDNGADVNFKSA--------------TGFTALHMACRFHSNDNIVRKLLH---HGAYYDMKDGKTGKTPLKHAEAGKN- 631 (710)
Q Consensus 570 Ll~~g~~~~~~~~--------------~g~t~L~~A~~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~- 631 (710)
|+++|++++..+. .|.||||+|+.. |+.+++++|++ +|++++.++ ..|+||||+|+..|+
T Consensus 120 Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~gad~~~~d-~~g~tpLh~A~~~~~~ 197 (273)
T 2pnn_A 120 LVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACT-NQLAIVKFLLQNSWQPADISARD-SVGNTVLHALVEVADN 197 (273)
T ss_dssp HHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT-TCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCS
T ss_pred HHHCCCCcCccccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhcccCCCCceeeC-CCCCcHHHHHHHccCc
Confidence 9999999999987 799999999999 99999999999 999999999 999999999999888
Q ss_pred --------hhHHHHHHhhhhccc-------cCCCCCCCchhhHHHHhhh---cccccceeeh-hHHHHhhhcccchhHH
Q psy15068 632 --------RDIIDLLHLIDNLFA-------SVTNPYDPNVYHRIELMNS---AKQLGLVHVF-EIMKVVKNYAGETLIG 691 (710)
Q Consensus 632 --------~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~-~~~~~~~~~~G~t~l~ 691 (710)
.+++++|+++|+++| .+|..|+||| |+|+..|+ +++| +++|| |+ ......+.+|-+
T Consensus 198 ~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL-~~A~~~g~~~iv~~L-l~~ga~dp--~~~~~~~~~~~~ 272 (273)
T 2pnn_A 198 TVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPL-ALAASSGKIGVLAYI-LQREIHEP--ECRHAAAHHHHH 272 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHTC----------------
T ss_pred chhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHH-HHHHHhChHHHHHHH-HHCCCCCc--hhhhhhhhhccC
Confidence 799999999999997 4899999999 99999999 9999 99999 88 777777777654
No 51
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=3.1e-31 Score=242.48 Aligned_cols=192 Identities=20% Similarity=0.296 Sum_probs=154.3
Q ss_pred ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q psy15068 54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYL 133 (710)
Q Consensus 54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~ 133 (710)
..+.||||.|+..|+.+.++.|+..+..+++..+..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 35779999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHH-hCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC-CCcccCCCCCCCCHHHHHHHhCC---
Q psy15068 134 GNKNIVKFLL-SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG-ANVREKMPFTDFSPLHFAVVKKN--- 208 (710)
Q Consensus 134 g~~~iv~~Ll-~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~l~~A~~~~~--- 208 (710)
|+.+++++|+ ..+++++..+..|.||||+|+..+ +.+++++|+++| ++++..+. .|.||||.|+..++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~~-~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG------HIDNVKLLLEDGREDIDFQND-FGYTALIEAVGLREGNQ 155 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT------CHHHHHHHHHHCCCCTTCCCT-TSCCHHHHHHHSSCCSH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC------CHHHHHHHHHcCCCCcCCCCC-CCCCHHHHHHHhccchh
Confidence 9999999999 566788888888888888888877 777788877777 66666666 77777777777665
Q ss_pred --HHHHHHHHhCCCCcchhhccCCChhHHHHHhcCcHHHHHHHHccCCCccccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q psy15068 209 --LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286 (710)
Q Consensus 209 --~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~~~~v~~lL~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ 286 (710)
.+++++|+++|++++ ..+..|.|||++|+..|+.+++++|+++
T Consensus 156 ~~~~~v~~Ll~~ga~~~-----------------------------------~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 156 LYQDIVKLLMENGADQS-----------------------------------IKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHHHHHTTCCTT-----------------------------------CCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred hHHHHHHHHHHCCCCCC-----------------------------------ccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 566666666555554 4455555666666666666666666655
Q ss_pred C
Q psy15068 287 K 287 (710)
Q Consensus 287 g 287 (710)
|
T Consensus 201 G 201 (201)
T 3hra_A 201 N 201 (201)
T ss_dssp C
T ss_pred C
Confidence 4
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3.8e-32 Score=261.40 Aligned_cols=212 Identities=22% Similarity=0.307 Sum_probs=167.1
Q ss_pred ccccccccchhhhhhcChhhHHHHHHhhh----ccCC----CccccchhHHHHHHhc---CCHHHHHHHHhcCCCC----
Q psy15068 18 KESSYRHHHLFSEIMFSEEDAFGYFLQGI----INSS----SAKSVELTLLCSAVWD---NKIREVEFLLSTGDHD---- 82 (710)
Q Consensus 18 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~----~~~~----~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~~~~~---- 82 (710)
.....+.|+|+.|+..|+.++|++|++.+ .+++ ..+..|.||||.|+.. |+.++|++|++.|+ +
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga-~~~~~ 86 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR-KTDSL 86 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH-HTTCH
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc-cccch
Confidence 35567889999999999999999988754 3443 3577899999999986 99999999999876 3
Q ss_pred ---Cc----cccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCC--------------CCCCHHHHHHhcCCHHHHHH
Q psy15068 83 ---VN----EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDE--------------KGYTPLHLACYLGNKNIVKF 141 (710)
Q Consensus 83 ---~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--------------~~~t~L~~A~~~g~~~iv~~ 141 (710)
++ ..|..|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.++|++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 22 2566899999999999999999999999999998887 79999999999999999999
Q ss_pred HHh---CCCCccccccCCCchhHHhhhccCCCCCC---HHHHHHHHHHcCCCccc-------CCCCCCCCHHHHHHHhCC
Q psy15068 142 LLS---KKADVRAKCSMMVTPILAVSANMSEDSTD---TNEIISMLIENGANVRE-------KMPFTDFSPLHFAVVKKN 208 (710)
Q Consensus 142 Ll~---~g~~~~~~~~~~~~~l~~a~~~~~~~~~~---~~~~~~~Ll~~~~~~~~-------~~~~~~~~~l~~A~~~~~ 208 (710)
|++ +|++++.++..|.||||+|+..+...... ..+++++|+++|++++. .+. .|.|||++|+..|+
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~-~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNR-KGLTPLALAASSGK 245 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT-TSCCHHHHHHHTTC
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCC-CCCCHHHHHHHhCh
Confidence 999 89999999999999999999877110000 07889999999988864 444 89999999999999
Q ss_pred HHHHHHHHhCCC-CcchhhccCCC
Q psy15068 209 LSVVELLIKCKA-DTNLIVKVNQE 231 (710)
Q Consensus 209 ~~~v~~Ll~~g~-~~~~~~~~~~~ 231 (710)
.+++++|+++|+ ++......+..
T Consensus 246 ~~iv~~Ll~~ga~dp~~~~~~~~~ 269 (273)
T 2pnn_A 246 IGVLAYILQREIHEPECRHAAAHH 269 (273)
T ss_dssp HHHHHHHHHHHTC-----------
T ss_pred HHHHHHHHHCCCCCchhhhhhhhh
Confidence 999999999998 66555444443
No 53
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=7.6e-33 Score=256.30 Aligned_cols=200 Identities=16% Similarity=0.085 Sum_probs=173.8
Q ss_pred HHHHHHcCCCCCchh-hccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCc
Q psy15068 475 VKELQNYGAQIDKEN-YLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS 553 (710)
Q Consensus 475 v~~Ll~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t 553 (710)
++.|+++|++++..+ ....+.++ +|.| +..++.+++++|++.|++++.++..|.|
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~--L~~A----------------------~~~g~~~~v~~Ll~~g~~~~~~d~~g~t 56 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVL--LLDA----------------------ALTGELEVVQQAVKEMNDPSQPNEEGIT 56 (229)
T ss_dssp ---------CCCCCCCTTSCHHHH--HHHH----------------------HHHTCHHHHHHHHHHSSCTTCCCTTSCC
T ss_pred CeehhccCCCCccccccccchhHH--HHHH----------------------HHcCCHHHHHHHHhcCCCCCCCCCCCCC
Confidence 456788888765433 12567778 9999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHH--HhCCC
Q psy15068 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA--EAGKN 631 (710)
Q Consensus 554 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A--~~~~~ 631 (710)
|||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++..++..|.||||+| +..|+
T Consensus 57 pLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~ 135 (229)
T 2vge_A 57 ALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASC-NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY 135 (229)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh
Confidence 99999999999999999999999999999999999999999 9999999999999999999757999999999 99999
Q ss_pred hhHHHHHHhhhhccccCCCCCCCchhhHHHHhhhcccccceeehhHHHHhhhcccchhHHHHhhhchhHH
Q psy15068 632 RDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFL 701 (710)
Q Consensus 632 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~ 701 (710)
.+++++|+++|++++.+|..|.||+ +.++.....++| ++.|+++..+.+|..|.||||+|+++|+.++
T Consensus 136 ~~~v~~Ll~~ga~~~~~~~~~~~~l-~~~~~~~~~~~l-l~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 136 ADCATYLADVEQSMGLMNSGAVYAL-WDYSAEFGDELS-FREGESVTVLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp HHHHHHHHHHHHHTTTSGGGEEEES-SCBCCSSTTBCC-BCTTCEEEEEESSCTTCSSEEEEEETTEEEE
T ss_pred HHHHHHHHHcCCCcccccCCchHHH-HHHhhccccccC-ccccccccccccCCCcccHHHHHHHcCCcce
Confidence 9999999999999999999999999 766666568999 9999983227889999999999999998653
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1e-31 Score=256.64 Aligned_cols=203 Identities=19% Similarity=0.159 Sum_probs=176.3
Q ss_pred cccCCHHHHHHHccCcHHH----HHHHHHCCCCCCCCC---CCCCCCHHHHHH---HcCCHhHHHHHHHcCCCCCchhhc
Q psy15068 422 FCFRSALQYACKHKNNIEM----VKLLLLHGADVNDTS---NKPKQKPLAVAI---QSGDFQIVKELQNYGAQIDKENYL 491 (710)
Q Consensus 422 ~~~~t~l~~A~~~~~~~~~----~~~Ll~~~~~~~~~~---~~~~~t~L~~A~---~~~~~~~v~~Ll~~~~~~~~~~~~ 491 (710)
.+++++|+.|+.. |+.+. +++|++.|.+++... +..|.||||+|+ ..|+.+++++|++.|++.....
T Consensus 3 ~~~~~~L~~A~~~-g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~-- 79 (260)
T 3jxi_A 3 VFNRPILFDIVSR-GSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR-- 79 (260)
T ss_dssp CCCHHHHHHHHHH-TCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH--
T ss_pred cchHHHHHHHHHh-CCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH--
Confidence 3488999999999 99995 555556999988661 267999999999 7799999999999886543221
Q ss_pred cchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15068 492 KNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLL 571 (710)
Q Consensus 492 ~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 571 (710)
.++ ...++..+..|.||||+|+..|+.+++++|+
T Consensus 80 --------------------------------------------~~~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 113 (260)
T 3jxi_A 80 --------------------------------------------EFI--NSPFRDVYYRGQTALHIAIERRCKHYVELLV 113 (260)
T ss_dssp --------------------------------------------HHH--TCCBCCSSEESBCHHHHHHHTTCHHHHHHHH
T ss_pred --------------------------------------------hhh--cccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 001 1335556678999999999999999999999
Q ss_pred HcCCCCcccC--------------CCCCcHHHHHHhcCCchHHHHHHHH---cCCCCCCCCCCCCCCHhHHHHhCCC---
Q psy15068 572 DNGADVNFKS--------------ATGFTALHMACRFHSNDNIVRKLLH---HGAYYDMKDGKTGKTPLKHAEAGKN--- 631 (710)
Q Consensus 572 ~~g~~~~~~~--------------~~g~t~L~~A~~~~~~~~~v~~Ll~---~g~~~~~~~~~~g~t~L~~A~~~~~--- 631 (710)
++|++++..+ ..|.||||+|+.. |+.+++++|++ +|++++.++ ..|+||||+|+..++
T Consensus 114 ~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~ga~~~~~d-~~g~TpLh~A~~~~~~~~ 191 (260)
T 3jxi_A 114 EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACT-NQPHIVHYLTENGHKQADLRRQD-SRGNTVLHALVAIADNTR 191 (260)
T ss_dssp HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHT-TCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCSSH
T ss_pred hCCCCcCccccccccCcccccccccCCCCHHHHHHHc-CCHHHHHHHHhccccCCCCcccC-CCCCcHHHHHHHhccCch
Confidence 9999999998 6899999999999 99999999999 999999999 999999999998777
Q ss_pred ------hhHHHHHHhhhhcc-------ccCCCCCCCchhhHHHHhhh---cccccceeehhH
Q psy15068 632 ------RDIIDLLHLIDNLF-------ASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEI 677 (710)
Q Consensus 632 ------~~~v~~Ll~~g~~~-------~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~ 677 (710)
.+++++|+++|+++ +.+|..|+||| |+|+..|+ +++| +++|++.
T Consensus 192 ~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL-~~A~~~g~~~~v~~L-l~~g~~~ 251 (260)
T 3jxi_A 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL-MMAAKTGKIGIFQHI-IRREIAD 251 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH-HHHHHcCCHHHHHHH-HHhCCCc
Confidence 69999999999999 78999999999 99999999 9999 9999988
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.1e-31 Score=254.50 Aligned_cols=202 Identities=22% Similarity=0.261 Sum_probs=175.2
Q ss_pred cccccchhhhhhcChhhHHHHHHh----hhccCCCcc----ccchhHHHHHH---hcCCHHHHHHHHhcCC---------
Q psy15068 21 SYRHHHLFSEIMFSEEDAFGYFLQ----GIINSSSAK----SVELTLLCSAV---WDNKIREVEFLLSTGD--------- 80 (710)
Q Consensus 21 ~~~~~~l~~a~~~~~~~~~~~ll~----~~~~~~~~~----~~~~t~L~~A~---~~g~~~~v~~Ll~~~~--------- 80 (710)
.++.++|+.|+..|+.+.++.|++ .|.+++..+ ..|.||||.|+ ..|+.++|++|++.++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 357799999999999996555555 999998776 66999999999 7799999999999875
Q ss_pred -CCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCC--------------CCCCCHHHHHHhcCCHHHHHHHHh-
Q psy15068 81 -HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRD--------------EKGYTPLHLACYLGNKNIVKFLLS- 144 (710)
Q Consensus 81 -~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--------------~~~~t~L~~A~~~g~~~iv~~Ll~- 144 (710)
..++..|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.++|++|++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 1345556699999999999999999999999999999998 689999999999999999999999
Q ss_pred --CCCCccccccCCCchhHHhhhccCCCCC---CHHHHHHHHHHcCCCc-------ccCCCCCCCCHHHHHHHhCCHHHH
Q psy15068 145 --KKADVRAKCSMMVTPILAVSANMSEDST---DTNEIISMLIENGANV-------REKMPFTDFSPLHFAVVKKNLSVV 212 (710)
Q Consensus 145 --~g~~~~~~~~~~~~~l~~a~~~~~~~~~---~~~~~~~~Ll~~~~~~-------~~~~~~~~~~~l~~A~~~~~~~~v 212 (710)
+|++++.++..|.||||+|+..+..... ...+++++|+++|+++ +..+. .|.|||++|+..|+.+++
T Consensus 163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~-~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN-DGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT-TSCCHHHHHHHTTCHHHH
T ss_pred cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccC-CCCCHHHHHHHcCCHHHH
Confidence 9999999999999999999987721100 0168999999999988 45666 999999999999999999
Q ss_pred HHHHhCCCCcc
Q psy15068 213 ELLIKCKADTN 223 (710)
Q Consensus 213 ~~Ll~~g~~~~ 223 (710)
++|+++|++..
T Consensus 242 ~~Ll~~g~~~~ 252 (260)
T 3jxi_A 242 QHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhCCCcc
Confidence 99999987654
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=6.9e-30 Score=244.60 Aligned_cols=189 Identities=20% Similarity=0.203 Sum_probs=163.7
Q ss_pred ccchhhhhhcChhhHHHHHHhhhcc--CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHH---
Q psy15068 24 HHHLFSEIMFSEEDAFGYFLQGIIN--SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAI--- 98 (710)
Q Consensus 24 ~~~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~--- 98 (710)
.++++.|+..++.+.++.+++.+.+ +|..|..|.||||+|+..|+.++|++|++.|+.+++..+..|+||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 4677888888888888888887766 88888889999999999999999999999887788888888999999888
Q ss_pred --HcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHH
Q psy15068 99 --LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176 (710)
Q Consensus 99 --~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~ 176 (710)
..++.+++++|++.|...+..+..|.||||+|+..|+.++|++|+++|++++.+|..|.||||+|+..+ +.+
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g------~~~ 230 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG------HKE 230 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT------CHH
T ss_pred hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC------CHH
Confidence 668888899999888888888888889999999999999999999999988888888888888888888 888
Q ss_pred HHHHHHH-cCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCC
Q psy15068 177 IISMLIE-NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK 219 (710)
Q Consensus 177 ~~~~Ll~-~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g 219 (710)
++++|++ .|++++..+. .|.|||++|+..|+.+++++|++++
T Consensus 231 iv~~Ll~~~gad~~~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 231 IAGLLLAVPSCDISLTDR-DGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHTSTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHhcCCCCCcCcCC-CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 8888888 7888888777 8888888888888888888888764
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.2e-29 Score=223.99 Aligned_cols=156 Identities=29% Similarity=0.374 Sum_probs=81.1
Q ss_pred ccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068 22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101 (710)
Q Consensus 22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g 101 (710)
...++|+.|+..|+.+++++|+++|++++..|..|.||||.|+..|+.+++++|+++|+ +++..+..|+||||+|+..|
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-DVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTT
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHcC
Confidence 33445555555555555555555555555555555555555555555555555555555 55555555555555555555
Q ss_pred cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML 181 (710)
Q Consensus 102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L 181 (710)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+ +.+++++|
T Consensus 92 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~L 165 (169)
T 2y1l_E 92 HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNG------NEDLAEIL 165 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC------CHHHHHHH
Confidence 555555555555555555555555555555555555555555555555544444444444444444 44444444
Q ss_pred HHc
Q psy15068 182 IEN 184 (710)
Q Consensus 182 l~~ 184 (710)
++.
T Consensus 166 ~~~ 168 (169)
T 2y1l_E 166 QKL 168 (169)
T ss_dssp HTC
T ss_pred HHc
Confidence 443
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.6e-29 Score=228.83 Aligned_cols=163 Identities=25% Similarity=0.302 Sum_probs=147.4
Q ss_pred CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Q psy15068 49 SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLH 128 (710)
Q Consensus 49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~ 128 (710)
++.+|..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|+.+++++|++.|++++..|..|.||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFD-KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc-ccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 56778889999999999999999999999988 88999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCC
Q psy15068 129 LACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208 (710)
Q Consensus 129 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~ 208 (710)
+|+..|+.+++++|+++|++++.++..|.||||+|+..+ +.+++++|+++|++++..+. .|.||++.|+..|+
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG------RSEIVKKLLELGADISARDL-TGLTAEASARIFGR 179 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT------CHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHhCc
Confidence 999999999999999999999999999999999999988 88999999999998888877 88899999999999
Q ss_pred HHHHHHHHhCC
Q psy15068 209 LSVVELLIKCK 219 (710)
Q Consensus 209 ~~~v~~Ll~~g 219 (710)
.+++++|++.|
T Consensus 180 ~~~v~~Ll~~~ 190 (192)
T 2rfm_A 180 QEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999998754
No 59
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=8.2e-29 Score=218.62 Aligned_cols=159 Identities=31% Similarity=0.402 Sum_probs=151.3
Q ss_pred cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068 53 KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY 132 (710)
Q Consensus 53 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~ 132 (710)
...+.|+|+.|++.|+.++|++|+++|+ +++.++..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGA-DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 4467899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHH
Q psy15068 133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVV 212 (710)
Q Consensus 133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v 212 (710)
.|+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++..+. .|.||++.|+..|+.+++
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG------HLEIVEVLLKNGADVNAQDK-FGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999 99999999999999988887 899999999999999999
Q ss_pred HHHHhCC
Q psy15068 213 ELLIKCK 219 (710)
Q Consensus 213 ~~Ll~~g 219 (710)
++|++.|
T Consensus 163 ~~L~~~G 169 (169)
T 2y1l_E 163 EILQKLN 169 (169)
T ss_dssp HHHHTC-
T ss_pred HHHHHcC
Confidence 9999876
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.5e-29 Score=224.55 Aligned_cols=166 Identities=20% Similarity=0.209 Sum_probs=89.0
Q ss_pred hhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH
Q psy15068 57 LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK 136 (710)
Q Consensus 57 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~ 136 (710)
.||||.|+..|+.+++++|++.++..++.++..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 35555555555555555555555522455555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHH
Q psy15068 137 NIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLI 216 (710)
Q Consensus 137 ~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll 216 (710)
+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++..+. .|.|||+.|+..|+.+++++|+
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGGTPLLYAVRGN------HVKCVEALLARGADLTTEAD-SGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHhCcHHHHHHHH
Confidence 5555555555555555555555555555555 55555555555555555444 5555555555555555555555
Q ss_pred hCCCCcchhhccC
Q psy15068 217 KCKADTNLIVKVN 229 (710)
Q Consensus 217 ~~g~~~~~~~~~~ 229 (710)
++|++....+..+
T Consensus 156 ~~~~~~~~~~~~~ 168 (172)
T 3v30_A 156 NHILKLFQSNLVP 168 (172)
T ss_dssp HHHHHHSCC----
T ss_pred HHHHHHhcccCCC
Confidence 5555444443333
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.5e-29 Score=222.26 Aligned_cols=141 Identities=23% Similarity=0.213 Sum_probs=70.2
Q ss_pred cchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHH
Q psy15068 25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYK 104 (710)
Q Consensus 25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 104 (710)
++|+.|+..|+.+++++|+++|++++..+..|.||||.|+. |+.+++++|++.|+ +++.++..|+||||+|+..|+.+
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~ 84 (162)
T 1ihb_A 7 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGA-NPDLKDRTGFAVIHDAARAGFLD 84 (162)
T ss_dssp HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHH
T ss_pred hHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHH
Confidence 44555555555555555555555555555555555555544 55555555555544 45555555555555555555555
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC-ccccccCCCchhHHhhhcc
Q psy15068 105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD-VRAKCSMMVTPILAVSANM 167 (710)
Q Consensus 105 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~~~~~l~~a~~~~ 167 (710)
++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.|||++|+..+
T Consensus 85 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~ 148 (162)
T 1ihb_A 85 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG 148 (162)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC
Confidence 55555555555555555555555555555555555555554444 2444444444444444444
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.8e-29 Score=222.76 Aligned_cols=169 Identities=22% Similarity=0.172 Sum_probs=155.7
Q ss_pred cccchhhhhhcChhhHHHHHHhhhcc-CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQGIIN-SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g 101 (710)
..+||+.|+..|+.+++++|++.+.. ++..+..|.||||.|+..|+.++|++|++.|+ +++.++..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA-DPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CchhhcccCCCHHHHHHHCC
Confidence 45899999999999999999999877 88999999999999999999999999999999 99999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML 181 (710)
Q Consensus 102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L 181 (710)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+ +.+++++|
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~------~~~~~~~L 154 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALG------YRKVQQVI 154 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT------CHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhC------cHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHcCCCcccCCCCCCCCH
Q psy15068 182 IENGANVREKMPFTDFSP 199 (710)
Q Consensus 182 l~~~~~~~~~~~~~~~~~ 199 (710)
+++++++..++. .+.||
T Consensus 155 ~~~~~~~~~~~~-~~~~p 171 (172)
T 3v30_A 155 ENHILKLFQSNL-VPADP 171 (172)
T ss_dssp HHHHHHHSCC--------
T ss_pred HHHHHHHhcccC-CCCCC
Confidence 999988877655 55444
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2.9e-30 Score=242.01 Aligned_cols=210 Identities=14% Similarity=0.073 Sum_probs=155.1
Q ss_pred CCCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHH
Q psy15068 456 NKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVK 535 (710)
Q Consensus 456 ~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (710)
+..|.|||+.|+..+..++++.|+++|++++.. ..+.++ +|.| +..++.++++
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~---~~~~t~--L~~A----------------------~~~g~~~~v~ 54 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN---PLPLAL--LLDS----------------------SLEGEFDLVQ 54 (239)
T ss_dssp --------------------------------------CHHH--HHHH----------------------HHHTCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC---chhhHH--HHHH----------------------HHcCCHHHHH
Confidence 345778888888888888888888888777643 556777 7777 7778888888
Q ss_pred HHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCC
Q psy15068 536 KNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD 615 (710)
Q Consensus 536 ~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~ 615 (710)
+|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++..+
T Consensus 55 ~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~ga~~~~~~ 133 (239)
T 1ycs_B 55 RIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC-NNVQVCKFLVESGAAVFAMT 133 (239)
T ss_dssp HHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcceec
Confidence 88888888889999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCC-CHhHHH--HhCCChhHHHHHHhhhhccccC---------CCCCCCchhhHHHHhhh-cccccceeehh---HH-
Q psy15068 616 GKTGK-TPLKHA--EAGKNRDIIDLLHLIDNLFASV---------TNPYDPNVYHRIELMNS-AKQLGLVHVFE---IM- 678 (710)
Q Consensus 616 ~~~g~-t~L~~A--~~~~~~~~v~~Ll~~g~~~~~~---------~~~g~t~L~~~A~~~~~-~~~L~~~~g~~---~~- 678 (710)
..|. ||||+| +..|+.+++++|+++|++++.. +..|.||+ ++|...|. +++| ...+.+ .+
T Consensus 134 -~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~-eLa~~~G~~i~vl-~~~~~~~~~Ww~ 210 (239)
T 1ycs_B 134 -YSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDD-ELPMKEGDCMTII-HREDEDEIEWWW 210 (239)
T ss_dssp -SSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTT-BCCBCSSCEEEEC-CCCTTSCSSEEE
T ss_pred -CCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCC-cccccCCCEEEEE-EecCCCCCCEEE
Confidence 5555 999999 7889999999999999998886 67799999 99999999 8888 777766 21
Q ss_pred HHhhhcccchhHHHHhhh
Q psy15068 679 KVVKNYAGETLIGVARKM 696 (710)
Q Consensus 679 ~~~~~~~G~t~l~~a~~~ 696 (710)
....+..|.+|.++....
T Consensus 211 ~~~~~~~G~~P~~yv~~~ 228 (239)
T 1ycs_B 211 ARLNDKEGYVPRNLLGLY 228 (239)
T ss_dssp EEETTEEEEEEGGGEECC
T ss_pred EEECCcEEEeehHHeeEC
Confidence 145688899999987544
No 64
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=3.4e-29 Score=226.58 Aligned_cols=160 Identities=33% Similarity=0.384 Sum_probs=155.7
Q ss_pred cccccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHH
Q psy15068 19 ESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAI 98 (710)
Q Consensus 19 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 98 (710)
+...+.|||+.|+..|+.+++++|+++|.+++..+..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGS-NVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHH
Confidence 46678999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHH
Q psy15068 99 LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178 (710)
Q Consensus 99 ~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~ 178 (710)
..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+ +.+++
T Consensus 110 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~------~~~~v 183 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG------RQEVI 183 (192)
T ss_dssp HHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT------CHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC------cHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHcC
Q psy15068 179 SMLIENG 185 (710)
Q Consensus 179 ~~Ll~~~ 185 (710)
++|++.+
T Consensus 184 ~~Ll~~~ 190 (192)
T 2rfm_A 184 KIFTEVR 190 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9999864
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=4.1e-29 Score=220.44 Aligned_cols=158 Identities=22% Similarity=0.155 Sum_probs=107.7
Q ss_pred cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL 102 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~ 102 (710)
+.|||+.|+..|+.+++++|++.|.+++..|..|.||||.|+..|+.+++++|++.|+ +++..+..|.||||+|+..|+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA-DPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHHTC
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCC
Confidence 4566677777777777777776666666666666677777777777777777776666 666666666677777777777
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHH
Q psy15068 103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI 182 (710)
Q Consensus 103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll 182 (710)
.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+ +.+++++|+
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~L~ 155 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALG------YRSVQQVIE 155 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT------CHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC------cHHHHHHHH
Confidence 77777777666666666666677777777767777777777666666666666666666666666 666666666
Q ss_pred HcCCC
Q psy15068 183 ENGAN 187 (710)
Q Consensus 183 ~~~~~ 187 (710)
+++.+
T Consensus 156 ~~~~~ 160 (167)
T 3v31_A 156 SHLLK 160 (167)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 66
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=5.6e-32 Score=267.11 Aligned_cols=262 Identities=11% Similarity=0.046 Sum_probs=185.9
Q ss_pred cchhhhhh-cChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCC--ccccCCCCcHHHHHHHcC
Q psy15068 25 HHLFSEIM-FSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDV--NEKLQDGRTALYMAILQG 101 (710)
Q Consensus 25 ~~l~~a~~-~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~g 101 (710)
++++.|.. +++.+++++++++|.+ +.||||.|++.|+.++|++|++.++.+. +..+..|.||||+|+..|
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~-------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G 139 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 139 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCC-------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCC-------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcC
Confidence 46777766 6889999999987754 4699999999999999999999987221 234557889999999999
Q ss_pred cHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccc--cccCCCchhHHhh-hccCCCCCCHH
Q psy15068 102 LYKMVTLLIHHGANV---NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA--KCSMMVTPILAVS-ANMSEDSTDTN 175 (710)
Q Consensus 102 ~~~~v~~Ll~~g~~~---~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~~ 175 (710)
+.++|++|+++|+++ +..+.. .||||+|+..|+.++|++|+++|++++. .+..|.||||+|+ ..| +.
T Consensus 140 ~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G------~~ 212 (376)
T 2aja_A 140 HLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG------HH 212 (376)
T ss_dssp CHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTC------CH
T ss_pred CHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCC------CH
Confidence 999999999999752 222223 8999999999999999999999999887 8889999999999 999 99
Q ss_pred HHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCCcchhhccCCChhHHHHHhcCc-------------
Q psy15068 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNS------------- 242 (710)
Q Consensus 176 ~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~l~~A~~~~~------------- 242 (710)
+++++|+++|+ .+.|||+.|+..|+.+++++|++.|++++..+.. ++.|+..|+
T Consensus 213 eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~-----l~~A~~~g~~~vv~~~~~~~~~ 279 (376)
T 2aja_A 213 NVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDA-----FKLSNPDGVFDLVTKSECLQGF 279 (376)
T ss_dssp HHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTT-----TTTTSSSSCCCCSSHHHHHHHH
T ss_pred HHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccccccHH-----HHHHHHCCChhhhcHHhhhhhH
Confidence 99999999774 3679999999999999999999999877654432 444444443
Q ss_pred --------------HHHHHHHHccCCCc----cccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCcCCCCChHHHH
Q psy15068 243 --------------VKIVEAFLNSKNFD----VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA 304 (710)
Q Consensus 243 --------------~~~v~~lL~~~~~~----~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a 304 (710)
.+.+++++....+. .......+.|||++|+..|+.+++++|++.| ...+..+.|++.+|
T Consensus 280 ~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~ 356 (376)
T 2aja_A 280 YMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYIN 356 (376)
T ss_dssp HHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC-------
T ss_pred HHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccc
Confidence 34444222211110 0112234567888888888888888888764 44566678888888
Q ss_pred HHhCCCcHHHHHHH
Q psy15068 305 IGMGRKHTHVAEYL 318 (710)
Q Consensus 305 ~~~~~~~~~~~~~L 318 (710)
-..|.. ++.+.-
T Consensus 357 ~~~~~~--~~~~~~ 368 (376)
T 2aja_A 357 ETGGRL--DLRAVA 368 (376)
T ss_dssp --------------
T ss_pred cccccc--cHHHHH
Confidence 888877 555543
No 67
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=243.21 Aligned_cols=194 Identities=22% Similarity=0.264 Sum_probs=162.7
Q ss_pred cCCHHHHHHHccCcHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHcCCHhHHHHHHHcCC-CCCchhhccchHHHHhh
Q psy15068 424 FRSALQYACKHKNNIEMVKLLLLHGAD--VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA-QIDKENYLKNKEAARIA 500 (710)
Q Consensus 424 ~~t~l~~A~~~~~~~~~~~~Ll~~~~~--~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~l 500 (710)
+++++|.|+.. ++.+.++.+++.+.+ ++.. +..|.||||+|+..|+.+++++|++.|+ +++..+ ..|.+| +
T Consensus 76 ~~~~l~~a~~~-~~~~~~~~l~~~~~~~~~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~--~~g~tp--L 149 (276)
T 4hbd_A 76 CRSDAHPELVR-RHLVTFRAMSARLLDYVVNIA-DSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN--RAGYSP--I 149 (276)
T ss_dssp HSTTCCHHHHH-HHHHHHHHHCHHHHHHHHTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC--TTSCCH--H
T ss_pred hccCCCHHHHH-HHHHHHHHHHHHHHhhcCcCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC--CCCCCH--H
Confidence 56778888888 888888888877665 6666 8889999999999999999999999997 888877 778888 7
Q ss_pred hhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc
Q psy15068 501 HSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK 580 (710)
Q Consensus 501 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 580 (710)
|.|+... ....++.+++++|++.|.+.+..+..|.||||+|+..|+.+++++|+++|++++.+
T Consensus 150 ~~a~~~~-----------------~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~ 212 (276)
T 4hbd_A 150 MLTALAT-----------------LKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQ 212 (276)
T ss_dssp HHGGGCC-----------------CCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHH-----------------hhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC
Confidence 7772100 01567788888888888888888888899999999999999999999999999998
Q ss_pred CCCCCcHHHHHHhcCCchHHHHHHHH-cCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhh
Q psy15068 581 SATGFTALHMACRFHSNDNIVRKLLH-HGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID 642 (710)
Q Consensus 581 ~~~g~t~L~~A~~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 642 (710)
|..|+||||+|+.. |+.+++++|++ .|++++.++ ..|.||||+|+..|+.+++++|++++
T Consensus 213 d~~G~TpLh~A~~~-g~~~iv~~Ll~~~gad~~~~d-~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 213 DDDGSTALMCACEH-GHKEIAGLLLAVPSCDISLTD-RDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CTTSCCHHHHHHHH-TCHHHHHHHHTSTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHC-CCHHHHHHHHhcCCCCCcCcC-CCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999999988 88999999998 789998888 88999999999999999999998863
No 68
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=7.7e-29 Score=217.65 Aligned_cols=158 Identities=23% Similarity=0.217 Sum_probs=149.4
Q ss_pred cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068 55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134 (710)
Q Consensus 55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g 134 (710)
...||||.|+..|+.+++++|++.++ +++.++..|+||||+|+. |+.+++++|++.|++++.++..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNV-NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCC-CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCC-CccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 46799999999999999999999999 999999999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCc-ccCCCCCCCCHHHHHHHhCCHHHHH
Q psy15068 135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANV-REKMPFTDFSPLHFAVVKKNLSVVE 213 (710)
Q Consensus 135 ~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~-~~~~~~~~~~~l~~A~~~~~~~~v~ 213 (710)
+.+++++|+++|++++.++..|.||||+|+..+ +.+++++|+++|++. +..+. .|.|||+.|+..|+.++++
T Consensus 82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~~-~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG------HLRVVEFLVKHTASNVGHRNH-KGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC------CHHHHHHHHHccCCCCCCcCC-CCCcHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999 999999999999984 66665 8999999999999999999
Q ss_pred HHHhCCCC
Q psy15068 214 LLIKCKAD 221 (710)
Q Consensus 214 ~Ll~~g~~ 221 (710)
+|+++|++
T Consensus 155 ~Ll~~GAd 162 (162)
T 1ihb_A 155 LMQANGAG 162 (162)
T ss_dssp HHHHTC--
T ss_pred HHHHhCCC
Confidence 99999975
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.8e-28 Score=218.93 Aligned_cols=166 Identities=20% Similarity=0.238 Sum_probs=142.0
Q ss_pred cccccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHH
Q psy15068 21 SYRHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAIL 99 (710)
Q Consensus 21 ~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 99 (710)
+...++|+.|+..|+.+++++|++. +.+++..+..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA-RINVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHH
Confidence 3466888899999999999998886 56788888888899999999999999999998888 888888888999999999
Q ss_pred cCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHH
Q psy15068 100 QGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179 (710)
Q Consensus 100 ~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~ 179 (710)
.|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+ +.++++
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~------~~~~~~ 155 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPL------RELLRE 155 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH------HHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHH------HHHHHH
Confidence 99999999999988888888888899999999999999999999999888888888888888888888 888888
Q ss_pred HHHHcCCCcccCCC
Q psy15068 180 MLIENGANVREKMP 193 (710)
Q Consensus 180 ~Ll~~~~~~~~~~~ 193 (710)
+|++.|++++....
T Consensus 156 ~L~~~g~~~~~~~~ 169 (179)
T 3f6q_A 156 RAEKMGQNLNRIPY 169 (179)
T ss_dssp HHHHTTCCCSCBCC
T ss_pred HHHHhhcCcccCCc
Confidence 88888888776543
No 70
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1.3e-28 Score=217.30 Aligned_cols=159 Identities=21% Similarity=0.241 Sum_probs=152.8
Q ss_pred cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068 55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134 (710)
Q Consensus 55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g 134 (710)
.|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN-VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC-CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 47899999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHH
Q psy15068 135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVEL 214 (710)
Q Consensus 135 ~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ 214 (710)
+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++..+. .|.||++.|+..|+.+++++
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~~~~ 153 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN------HVKCVKMLLESGADPTIETD-SGYNSMDLAVALGYRSVQQV 153 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999999999999999999999 99999999999999998887 99999999999999999999
Q ss_pred HHhCCCC
Q psy15068 215 LIKCKAD 221 (710)
Q Consensus 215 Ll~~g~~ 221 (710)
|++++.+
T Consensus 154 L~~~~~~ 160 (167)
T 3v31_A 154 IESHLLK 160 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 71
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.6e-31 Score=245.03 Aligned_cols=156 Identities=24% Similarity=0.227 Sum_probs=129.5
Q ss_pred HHHHHhhhccCCCc---cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Q psy15068 39 FGYFLQGIINSSSA---KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN 115 (710)
Q Consensus 39 ~~~ll~~~~~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 115 (710)
++.|+++|.+++.. +..+.||||.|+..|+.++|++|++.|+ +++.+|..|+||||+|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN-DPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 46788888876644 4467789999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccc-cCCCchhHHh--hhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068 116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC-SMMVTPILAV--SANMSEDSTDTNEIISMLIENGANVREKM 192 (710)
Q Consensus 116 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-~~~~~~l~~a--~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 192 (710)
++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.|||++| +..+ +.+++++|+++|++++..+
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~------~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREG------YADCATYLADVEQSMGLMN 153 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTT------HHHHHHHHHHHHHHTTTSG
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcC------hHHHHHHHHHcCCCccccc
Confidence 99999999999999999999999999999999999886 5899999998 7777 8888888888888777766
Q ss_pred CCCCCCHHHH
Q psy15068 193 PFTDFSPLHF 202 (710)
Q Consensus 193 ~~~~~~~l~~ 202 (710)
. .+.++++.
T Consensus 154 ~-~~~~~l~~ 162 (229)
T 2vge_A 154 S-GAVYALWD 162 (229)
T ss_dssp G-GEEEESSC
T ss_pred C-CchHHHHH
Confidence 5 56666654
No 72
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=4e-31 Score=261.04 Aligned_cols=265 Identities=12% Similarity=0.004 Sum_probs=190.4
Q ss_pred cHHHHHHH-cCCHHHHHHHHHcCCCCCchhhhhhhhhccccCccccCCHHHHHHHccCcHHHHHHHHHCCCCCCC--CCC
Q psy15068 380 TPLLFAAK-HCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVND--TSN 456 (710)
Q Consensus 380 t~L~~A~~-~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~~Ll~~~~~~~~--~~~ 456 (710)
+++++|.. .++.+++++++++|.+ +.||||.|+.. |+.+++++|+++|..... ..+
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~g~~--------------------~~T~Lh~Aa~~-G~~e~v~~Ll~~ga~~~~~~~~~ 125 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKKGIK--------------------SEVICFVAAIT-GCSSALDTLCLLLTSDEIVKVIQ 125 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHHTCC--------------------HHHHHHHHHHH-CCHHHHHHHTTC--CCSSCC--C
T ss_pred HHHHHHHhcCCCHHHHHHHHHcCCC--------------------cCCHHHHHHHc-CCHHHHHHHHHcCCcHHHHHHhc
Confidence 56677665 4778899999998875 46999999999 999999999999983211 114
Q ss_pred CCCCCHHHHHHHcCCHhHHHHHHHcCCCCCchhhccchHHHHhhhhhhhHHHHHhhhHHHhhhHHHHHhhhcCchHHHHH
Q psy15068 457 KPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536 (710)
Q Consensus 457 ~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (710)
..+.||||+|+..|+.+++++|+++|+++...+......+| +|.| +..++.+++++
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~Tp--Lh~A----------------------a~~G~~eiv~~ 181 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA--FRLA----------------------AENGHLHVLNR 181 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHH--HHHH----------------------HHTTCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCH--HHHH----------------------HHCCCHHHHHH
Confidence 56788999999999999999999999874332221333888 9999 99999999999
Q ss_pred HHhcCCcccc--cCCCCCcHHHHHH-HcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCC
Q psy15068 537 NIEDGACVNV--SSERRGSALIYVA-WKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDM 613 (710)
Q Consensus 537 ll~~~~~~~~--~~~~g~t~L~~A~-~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~ 613 (710)
|+++|++++. .+..|.||||+|+ ..|+.+++++|+++|++ |.||||+|+.. |+.+++++|+++|++++.
T Consensus 182 Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~-g~~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 182 LCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEY-GEKYVNPFIARHVNRLKE 253 (376)
T ss_dssp HHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTT-TTTTHHHHHHHHHHHHHH
T ss_pred HHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHC-CCHHHHHHHHhcCccccc
Confidence 9999999887 8888999999999 99999999999998742 88999999999 999999999999988766
Q ss_pred CCCCCCCCHhHHHHhCCChh---------------------------HHHHHHhhhh-----ccccCCCCCCCchhhHHH
Q psy15068 614 KDGKTGKTPLKHAEAGKNRD---------------------------IIDLLHLIDN-----LFASVTNPYDPNVYHRIE 661 (710)
Q Consensus 614 ~~~~~g~t~L~~A~~~~~~~---------------------------~v~~Ll~~g~-----~~~~~~~~g~t~L~~~A~ 661 (710)
.+ ++++.|+..|+.+ .+++|++.+. +.......+.||| |+|+
T Consensus 254 ~~-----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L-~~A~ 327 (376)
T 2aja_A 254 MH-----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELL-RLAL 327 (376)
T ss_dssp HH-----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHH-HHHH
T ss_pred cc-----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHH-HHHH
Confidence 54 3566666666555 3344443210 0112234567899 9999
Q ss_pred Hhhh---cccccceeehhHHHHhhhcccchhHHHHhhhchhHHHHHHHhhc
Q psy15068 662 LMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERLEEVLT 709 (710)
Q Consensus 662 ~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~~~~~~~~~ 709 (710)
..|+ +++| ++.| .+++..|.||+.+|-.+|+.+++.+-.+++
T Consensus 328 ~~g~~e~v~lL-l~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (376)
T 2aja_A 328 RLGNQGACALL-LSIP-----SVLALTKANNYYINETGGRLDLRAVALEHH 372 (376)
T ss_dssp HHTCTTHHHHH-TTSH-----HHHHSCC-----------------------
T ss_pred HcCcHHHHHHH-HcCh-----HHHHHHHHhccccccccccccHHHHHHHHH
Confidence 9999 9999 8864 567899999999999999998877765554
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=2.2e-28 Score=218.34 Aligned_cols=168 Identities=24% Similarity=0.219 Sum_probs=157.3
Q ss_pred ccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhc
Q psy15068 54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYL 133 (710)
Q Consensus 54 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~ 133 (710)
..+.++|+.|+..|+.++|++|++.+..+++.++..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 35779999999999999999999997668999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHH
Q psy15068 134 GNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVE 213 (710)
Q Consensus 134 g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~ 213 (710)
|+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++..+. .|.||++.|+..++.++++
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~~~~~~~ 155 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG------QDQVAEDLVANGALVSICNK-YGEMPVDKAKAPLRELLRE 155 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCSSBCCT-TSCCGGGGSCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC------CHHHHHHHHHCCCCcchhcc-CCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 99999999999999999888 9999999999999999999
Q ss_pred HHHhCCCCcchhhcc
Q psy15068 214 LLIKCKADTNLIVKV 228 (710)
Q Consensus 214 ~Ll~~g~~~~~~~~~ 228 (710)
+|++.|++++..+..
T Consensus 156 ~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 156 RAEKMGQNLNRIPYK 170 (179)
T ss_dssp HHHHTTCCCSCBCCC
T ss_pred HHHHhhcCcccCCcc
Confidence 999999999876544
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.7e-28 Score=211.39 Aligned_cols=141 Identities=23% Similarity=0.274 Sum_probs=72.3
Q ss_pred cchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHH
Q psy15068 25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYK 104 (710)
Q Consensus 25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 104 (710)
++|+.|+..|+.+++++|+++|.+++ .+..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-SRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-CTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcChHH
Confidence 44555555555555555555554443 34445555555555555555555555554 55555555555555555555555
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhcc
Q psy15068 105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167 (710)
Q Consensus 105 ~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~ 167 (710)
++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|+..+
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 144 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG 144 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 555555555555555555555555555555555555555555555544444444444444444
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=2.6e-28 Score=214.80 Aligned_cols=155 Identities=29% Similarity=0.327 Sum_probs=79.0
Q ss_pred cccchhhhhhcChhhHHHHHHh-hhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQ-GIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g 101 (710)
+.++|+.|+..|+.+++++|++ .+.+++..+..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~ 86 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA-DVHAKDKGGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTT
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCC-CCCccCCCCCCHHHHHHHcC
Confidence 3445555555555555555554 333444444445555555555555555555555555 55555555555555555555
Q ss_pred cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML 181 (710)
Q Consensus 102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L 181 (710)
+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||+++|.. + +.+++++|
T Consensus 87 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~------~~~i~~~L 159 (165)
T 3twr_A 87 HYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-G------DTDIQDLL 159 (165)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-T------CHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-C------ChHHHHHH
Confidence 5555555555555555555555555555555555555555555555555555555555555443 3 44555555
Q ss_pred HHcC
Q psy15068 182 IENG 185 (710)
Q Consensus 182 l~~~ 185 (710)
+++|
T Consensus 160 ~~~g 163 (165)
T 3twr_A 160 RGDA 163 (165)
T ss_dssp HTC-
T ss_pred hhcc
Confidence 4443
No 76
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=7.7e-28 Score=208.52 Aligned_cols=151 Identities=26% Similarity=0.341 Sum_probs=143.3
Q ss_pred chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068 56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN 135 (710)
Q Consensus 56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~ 135 (710)
..|+|+.|++.|+.+++++|++.++ +++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA-PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC-CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC-CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh
Confidence 5699999999999999999999998 776 58899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068 136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215 (710)
Q Consensus 136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 215 (710)
.+++++|+++|++++.++..|.||||+|+..+ +.+++++|+++|++++..+. .|.||++.|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHN------HQEVVELLIKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCccccCC-CCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999 99999999999999988887 899999999999999999886
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=2.7e-28 Score=214.69 Aligned_cols=161 Identities=24% Similarity=0.304 Sum_probs=152.3
Q ss_pred ccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Q psy15068 52 AKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLAC 131 (710)
Q Consensus 52 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~ 131 (710)
.+..|.|+|+.|++.|+.+++++|++.+..+++..+..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 46679999999999999999999999776688889999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHH
Q psy15068 132 YLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSV 211 (710)
Q Consensus 132 ~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~ 211 (710)
..|+.+++++|+++|++++..+..|.||||+|+..+ +.+++++|+++|++++..+. .|.||++.|+. ++.++
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG------KYEICKLLLQHGADPTKKNR-DGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT------CHHHHHHHHHTTCCTTCCCT-TSCCTGGGSCT-TCHHH
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC------CHHHHHHHHHcCCCCcccCC-CCCChhHhHhc-CChHH
Confidence 999999999999999999999999999999999999 99999999999999999988 99999999999 89999
Q ss_pred HHHHHhCCC
Q psy15068 212 VELLIKCKA 220 (710)
Q Consensus 212 v~~Ll~~g~ 220 (710)
+++|++.|+
T Consensus 156 ~~~L~~~gA 164 (165)
T 3twr_A 156 QDLLRGDAA 164 (165)
T ss_dssp HHHHHTC--
T ss_pred HHHHhhccc
Confidence 999999885
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=3.5e-27 Score=205.43 Aligned_cols=153 Identities=23% Similarity=0.297 Sum_probs=100.2
Q ss_pred chhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCC
Q psy15068 56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN 135 (710)
Q Consensus 56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~ 135 (710)
+.|+||.|+..|+.+++++|++....+++..+..|+||||+ +..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45666666666666666666666333566666666666666 66666666666666666666666666666666666666
Q ss_pred HHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHH
Q psy15068 136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215 (710)
Q Consensus 136 ~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 215 (710)
.+++++|+++|++++.++..|.||||+|+..+ +.+++++|+++ ++++..+. .|.|||+.|+..|+.+++++|
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~~~~v~~Ll~~-~~~~~~~~-~g~t~l~~A~~~~~~~~v~~L 152 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEG------HTAVVSFLAAE-SDLHRRDA-RGLTPLELALQRGAQDLVDIL 152 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT------CHHHHHHHHTT-SCTTCCCT-TSCCHHHHHHHSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC------hHHHHHHHHhc-cCCCCcCC-CCCCHHHHHHHcCcHHHHHHH
Confidence 66666666666666666666666666666666 66666666666 66655555 666666666666666666666
Q ss_pred Hh
Q psy15068 216 IK 217 (710)
Q Consensus 216 l~ 217 (710)
++
T Consensus 153 l~ 154 (156)
T 1bd8_A 153 QG 154 (156)
T ss_dssp HT
T ss_pred Hh
Confidence 65
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=3.2e-27 Score=205.71 Aligned_cols=153 Identities=20% Similarity=0.281 Sum_probs=147.3
Q ss_pred cccchhhhhhcChhhHHHHHHhh-hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQG-IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g 101 (710)
+.++|+.|+..|+.+++++|++. +.+++..+..|.||||. +..|+.+++++|++.|+ +++.++..|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGA-SPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcC
Confidence 35899999999999999999998 44899999999999999 99999999999999999 99999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHH
Q psy15068 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISML 181 (710)
Q Consensus 102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~L 181 (710)
+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++ ++++.++..|.|||++|+..+ +.+++++|
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~------~~~~v~~L 152 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRG------AQDLVDIL 152 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSC------CHHHHHHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcC------cHHHHHHH
Confidence 99999999999999999999999999999999999999999999 999999999999999999999 99999999
Q ss_pred HHc
Q psy15068 182 IEN 184 (710)
Q Consensus 182 l~~ 184 (710)
+++
T Consensus 153 l~~ 155 (156)
T 1bd8_A 153 QGH 155 (156)
T ss_dssp HTT
T ss_pred Hhh
Confidence 874
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1.4e-28 Score=230.52 Aligned_cols=166 Identities=19% Similarity=0.161 Sum_probs=134.4
Q ss_pred hhcCchHHHHHHHhcCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHH
Q psy15068 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605 (710)
Q Consensus 526 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll 605 (710)
+..+..+.++.|+++|++++.. ..|.||||.|+..|+.+++++|+++|++++.+|..|+||||+|+.. |+.+++++|+
T Consensus 13 ~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll 90 (239)
T 1ycs_B 13 KRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA-GHTEIVKFLV 90 (239)
T ss_dssp -------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred hhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 8899999999999999999865 6789999999999999999999999999999999999999999999 9999999999
Q ss_pred HcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCC-CchhhHH--HHhhh---cccccceeehhHHH
Q psy15068 606 HHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYD-PNVYHRI--ELMNS---AKQLGLVHVFEIMK 679 (710)
Q Consensus 606 ~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~~A--~~~~~---~~~L~~~~g~~~~~ 679 (710)
++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.++..|. ||| |+| +..|+ +++| +++|+++
T Consensus 91 ~~ga~~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l-~~a~~~~~g~~~~~~~L-l~~~a~~-- 165 (239)
T 1ycs_B 91 QFGVNVNAAD-SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA-DKCEEMEEGYTQCSQFL-YGVQEKM-- 165 (239)
T ss_dssp HHTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHH-HHCCSSSTTCCCHHHHH-HHHHHHT--
T ss_pred HcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchH-HHHHHhhhccHHHHHHH-HHhhhcc--
Confidence 9999999999 9999999999999999999999999999999998887 999 999 77777 9999 9999999
Q ss_pred Hhh---------hcccchhHHHHhhhch
Q psy15068 680 VVK---------NYAGETLIGVARKMNY 698 (710)
Q Consensus 680 ~~~---------~~~G~t~l~~a~~~~~ 698 (710)
+.. +..|.||+++|...|.
T Consensus 166 ~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 166 GIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cccccceEEEEeccCCCCCCcccccCCC
Confidence 776 5568899999988775
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=1.9e-27 Score=206.54 Aligned_cols=142 Identities=22% Similarity=0.131 Sum_probs=118.0
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCC-Hh
Q psy15068 545 NVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKT-PL 623 (710)
Q Consensus 545 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t-~L 623 (710)
+..+..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+ . ++.+++++|+++|++++.++ ..|.| ||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~-~~~~~v~~Ll~~g~~~~~~d-~~g~ttpL 82 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-M-GSARVAELLLLHGAEPNCAD-PATLTRPV 82 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-T-TCHHHHHHHHTTTCCCCCCC-TTTCCCHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-c-CCHHHHHHHHHcCCCCCCcC-CCCCcHHH
Confidence 456778999999999999999999999999999999999999999985 6 99999999999999999999 99999 99
Q ss_pred HHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccchhHHHH
Q psy15068 624 KHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGETLIGVA 693 (710)
Q Consensus 624 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~t~l~~a 693 (710)
|+|+..|+.+++++|+++|++++.+|..|+||| |+|+..|+ +++| +++|+++ +.+|..|.||.+-+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~~~~~~v~~L-l~~ga~~--~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPV-DLAEELGHRDVARYL-RAAAGGT--RGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHH-HHHHHHTCHHHHHHH-SSCC-------------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHH-HHHHHhCHHHHHHHH-HHcCCCC--CccCcCcCcccccC
Confidence 999999999999999999999999999999999 99999999 9999 9999999 99999999998744
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1.3e-26 Score=195.89 Aligned_cols=134 Identities=20% Similarity=0.169 Sum_probs=98.8
Q ss_pred hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCC-CC
Q psy15068 46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK-GY 124 (710)
Q Consensus 46 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~ 124 (710)
+.+++..+..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+. |+.+++++|+++|++++.+|.. |.
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA-DPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCC-CcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 34667777777777777777777777777777777 777777777777777777 7777777777777777777777 77
Q ss_pred CHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCC
Q psy15068 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGAN 187 (710)
Q Consensus 125 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~ 187 (710)
||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+ +.+++++|+++|++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~------~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG------HRDIARYLHAATGD 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT------CHHHHHHHHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC------CHHHHHHHHHcCCC
Confidence 7777777777777777777777777777777777777777666 66667766666653
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=6.6e-27 Score=197.76 Aligned_cols=131 Identities=21% Similarity=0.168 Sum_probs=122.2
Q ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCC-C
Q psy15068 541 GACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT-G 619 (710)
Q Consensus 541 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~-g 619 (710)
+++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. ++.+++++|+++|++++.++ .. |
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~g~~~~~~~-~~~g 78 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM--GSAQVAELLLLHGAEPNCAD-PATL 78 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT--SCHHHHHHHHHHTCCSSCCB-TTTT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc--CCHHHHHHHHHCCCCCCCcC-CCCC
Confidence 46788899999999999999999999999999999999999999999999998 89999999999999999999 77 9
Q ss_pred CCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehh
Q psy15068 620 KTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFE 676 (710)
Q Consensus 620 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~ 676 (710)
.||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..++ +++| +++|||
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~~~~~~~~~L-l~~Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPV-DLAEEQGHRDIARYL-HAATGD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHH-HHHHHHTCHHHHHHH-HHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH-HHHHHcCCHHHHHHH-HHcCCC
Confidence 9999999999999999999999999999999999999 99999998 8999 998875
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=3.1e-26 Score=203.38 Aligned_cols=160 Identities=16% Similarity=0.200 Sum_probs=116.1
Q ss_pred chhHHHHHHhcCCHHHHHHHHhcCCCCCcccc-CCCCcHHHHHHHcCcH----HHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068 56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKL-QDGRTALYMAILQGLY----KMVTLLIHHGANVNDRDEKGYTPLHLA 130 (710)
Q Consensus 56 ~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~t~L~~A 130 (710)
+.++|+.|++.|+.+.++.+++.+. +.++ ..|+||||+|+..|+. +++++|++.|++++.+|..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 4567777788888877777777643 4444 5677888888777754 477788888888887777788888887
Q ss_pred HhcCC------HHHHHHHHhCCCCccccccCCC-chhHHhhhccCCCCCCHHHHHHHHHH-cCCCcccCCCCCCCCHHHH
Q psy15068 131 CYLGN------KNIVKFLLSKKADVRAKCSMMV-TPILAVSANMSEDSTDTNEIISMLIE-NGANVREKMPFTDFSPLHF 202 (710)
Q Consensus 131 ~~~g~------~~iv~~Ll~~g~~~~~~~~~~~-~~l~~a~~~~~~~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~l~~ 202 (710)
+..|+ .+++++|+++|++++.+|..|. ||||+|+..+... ....+++++|++ +|++++.++. .|.|||++
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~-~~~~~iv~~Ll~~~gad~~~~d~-~G~TpL~~ 160 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDE-NEMIPLYKLIFSQSGLQLLIKDK-WGLTALEF 160 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCH-HHHHHHHHHHHTSTTCCTTCCCT-TSCCHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCCh-hhHHHHHHHHHHhcCCCCcccCC-CCCCHHHH
Confidence 77776 5677888888888888888887 7888877733110 015567777887 7888777777 77888888
Q ss_pred HHHhCCHHHHHHHHhCCC
Q psy15068 203 AVVKKNLSVVELLIKCKA 220 (710)
Q Consensus 203 A~~~~~~~~v~~Ll~~g~ 220 (710)
|+..|+.+++++|.++..
T Consensus 161 A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 161 VKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp HHTTTCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHH
Confidence 888888888887776543
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=1.1e-26 Score=206.37 Aligned_cols=161 Identities=12% Similarity=0.139 Sum_probs=144.8
Q ss_pred ccccchhhhhhcChhhHHHHHHhhhccCCCcc-ccchhHHHHHHhcCCH----HHHHHHHhcCCCCCccccCCCCcHHHH
Q psy15068 22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAK-SVELTLLCSAVWDNKI----REVEFLLSTGDHDVNEKLQDGRTALYM 96 (710)
Q Consensus 22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 96 (710)
.++++|+.|++.|+.+.++.+++.+. +..+ ..|+||||.|+..|+. +++++|++.|+ +++.++..|+||||+
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga-dvn~~d~~g~TpLh~ 81 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGA-DIKSRTKEGTTLFFP 81 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC-CSSCCCTTCCCTHHH
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCC-CCCCCCCCCCcHHHH
Confidence 35689999999999999999998764 4555 7899999999999975 59999999999 999999999999999
Q ss_pred HHHcCc------HHHHHHHHHcCCCCCCCCCCCC-CHHHHHHhcC-----CHHHHHHHHh-CCCCccccccCCCchhHHh
Q psy15068 97 AILQGL------YKMVTLLIHHGANVNDRDEKGY-TPLHLACYLG-----NKNIVKFLLS-KKADVRAKCSMMVTPILAV 163 (710)
Q Consensus 97 A~~~g~------~~~v~~Ll~~g~~~~~~~~~~~-t~L~~A~~~g-----~~~iv~~Ll~-~g~~~~~~~~~~~~~l~~a 163 (710)
|+..|+ .+++++|+++|++++.+|..|. ||||+|+..+ +.+++++|++ +|++++.+|..|.|||++|
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 999986 6889999999999999999999 9999999954 4579999999 9999999999999999999
Q ss_pred hhccCCCCCCHHHHHHHHHHcCCCcccC
Q psy15068 164 SANMSEDSTDTNEIISMLIENGANVREK 191 (710)
Q Consensus 164 ~~~~~~~~~~~~~~~~~Ll~~~~~~~~~ 191 (710)
+..+ +.+++++|.+...+.+.+
T Consensus 162 ~~~~------~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 162 KRCQ------KPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp HTTT------CHHHHHHHHHHHHHHTCC
T ss_pred HHcC------CHHHHHHHHHHHHHHhcc
Confidence 9999 999999998775544433
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.9e-26 Score=199.04 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=108.3
Q ss_pred ccccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCc-HHHHHH
Q psy15068 20 SSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRT-ALYMAI 98 (710)
Q Consensus 20 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t-~L~~A~ 98 (710)
...+.|+|+.|+..|+.+++++|+++|++++..+..|.||||.|+ .|+.+++++|++.|+ +++.++..|+| |||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~-~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGA-EPNCADPATLTRPVHDAA 86 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTC-CCCCCCTTTCCCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHH
Confidence 445678888888888888888888888888888888888888885 888888888888888 88888888888 888888
Q ss_pred HcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhH
Q psy15068 99 LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL 161 (710)
Q Consensus 99 ~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~ 161 (710)
..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.+|.+
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 888888888888888888888888888888888888888888888888888888888888765
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=4e-25 Score=186.78 Aligned_cols=123 Identities=25% Similarity=0.324 Sum_probs=61.8
Q ss_pred ccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068 22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101 (710)
Q Consensus 22 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g 101 (710)
.+.|+|+.|+..|+.+++++|+++|++++..|..|.||||.|+..|+.+++++|++.|+ +++.+|..|+||||+|+..|
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA-DVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHHT
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCHHHHHHHcC
Confidence 34445555555555555555555555555554455555555555555555555555544 44444445555555555555
Q ss_pred cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhC
Q psy15068 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145 (710)
Q Consensus 102 ~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ 145 (710)
+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 55555555555555544444555555555555555555555443
No 88
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=1.5e-25 Score=200.38 Aligned_cols=165 Identities=24% Similarity=0.232 Sum_probs=145.0
Q ss_pred hhhhhcChhhHHHHHHhhhccCC-----------CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHH
Q psy15068 28 FSEIMFSEEDAFGYFLQGIINSS-----------SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYM 96 (710)
Q Consensus 28 ~~a~~~~~~~~~~~ll~~~~~~~-----------~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 96 (710)
+.|++.|..+.+++|++.+.... ..+..|.||||.|+..|+.+++++|++ ++ +++.+|..|+||||+
T Consensus 5 ~~aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~ 82 (183)
T 3deo_A 5 IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLF 82 (183)
T ss_dssp EEEEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TS-CTTCCCTTSCCHHHH
T ss_pred HHHHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cC-CCCCcCCCCCCHHHH
Confidence 34666777777777775432221 225689999999999999999999999 88 999999999999999
Q ss_pred HHHcCcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHH
Q psy15068 97 AILQGLYKMVTLLIHHGANVNDRD-EKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTN 175 (710)
Q Consensus 97 A~~~g~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ 175 (710)
|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+ +.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~------~~ 156 (183)
T 3deo_A 83 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL------KT 156 (183)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHH------HT
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhc------cC
Confidence 999999999999999999999998 88999999999999999999999999999999999999999999876 22
Q ss_pred HHHHHHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhC
Q psy15068 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKC 218 (710)
Q Consensus 176 ~~~~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~ 218 (710)
. .+.+++++|+..|..+++++|.++
T Consensus 157 -----------------~-~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 -----------------T-PKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp -----------------C-CCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred -----------------c-ccccHHHHHHHcCHHHHHHHHHHh
Confidence 1 566899999999999999999864
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.3e-24 Score=183.72 Aligned_cols=128 Identities=33% Similarity=0.437 Sum_probs=117.0
Q ss_pred CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068 51 SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130 (710)
Q Consensus 51 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A 130 (710)
..+..+.||||.|+..|+.++|++|++.|+ +++.+|..|+||||+|+..|+.+++++|++.|++++..|..|.||||+|
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGA-DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 345678899999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcC
Q psy15068 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENG 185 (710)
Q Consensus 131 ~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~ 185 (710)
+..|+.+++++|+++|++++..+..|.|||++|+..+ +.+++++|++.|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~------~~~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNG------NEDLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCC------CHHHHHHHHHcC
Confidence 9999999999999999999999988889888888888 888888888765
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=5.7e-25 Score=186.33 Aligned_cols=130 Identities=25% Similarity=0.248 Sum_probs=116.9
Q ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCC
Q psy15068 541 GACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGK 620 (710)
Q Consensus 541 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 620 (710)
|+++ .++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~~-~~g~ 77 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNH-GHLKVVELLLQHKALVNTTG-YQND 77 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-GGGC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHcCCcccCcC-CCCC
Confidence 4566 6788999999999999999999999999999999999999999999999 99999999999999999999 9999
Q ss_pred CHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeeh
Q psy15068 621 TPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVF 675 (710)
Q Consensus 621 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~ 675 (710)
||||+|+..|+.+++++|+++|++++.+|..|.||| |+|+..+. +++| .+.+.
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl-~~A~~~~~~~~l~~l-~~~~~ 133 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPV-DYTDDESMKSLLLLP-EKNES 133 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGG-GGCCCHHHHHHHSCC------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH-HHHhhccHHHHHhhc-ccccc
Confidence 999999999999999999999999999999999999 99999888 5666 44443
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=2.1e-24 Score=180.39 Aligned_cols=125 Identities=32% Similarity=0.421 Sum_probs=85.6
Q ss_pred cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL 102 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~ 102 (710)
+.|+|+.|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++.++ +++.++..|.||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC-CCcccCCCCCcHHHHHHHcCh
Confidence 4566666666666666666666666666666666666666666666666666666666 666666666666666666666
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCC
Q psy15068 103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148 (710)
Q Consensus 103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~ 148 (710)
.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 6666666666666666666666666666666666666666666653
No 92
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=3.7e-24 Score=178.88 Aligned_cols=126 Identities=40% Similarity=0.531 Sum_probs=113.5
Q ss_pred cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068 55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134 (710)
Q Consensus 55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g 134 (710)
+|.||||.|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 47899999999999999999999988 89999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCC
Q psy15068 135 NKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGAN 187 (710)
Q Consensus 135 ~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~ 187 (710)
+.+++++|+++|++++.++..|.||+++|+..+ +.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~------~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG------HLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC------cHHHHHHHHHcCCC
Confidence 999999999999999888888888888888888 88888888888764
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.1e-24 Score=184.59 Aligned_cols=133 Identities=32% Similarity=0.325 Sum_probs=120.1
Q ss_pred hccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCC
Q psy15068 46 IINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYT 125 (710)
Q Consensus 46 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t 125 (710)
|+++ .+|..|.||||.|+..|+.+++++|++.|+ +++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGS-DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 5666 678899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCC
Q psy15068 126 PLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA 186 (710)
Q Consensus 126 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~ 186 (710)
|||+|+..|+.+++++|+++|++++.++..|.||+++|+..+ ..+++++|.+.+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~------~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES------MKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH------HHHHHSCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc------HHHHHhhcccccc
Confidence 999999999999999999999999999999999999999988 8888888776543
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.5e-25 Score=197.93 Aligned_cols=137 Identities=18% Similarity=0.170 Sum_probs=126.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHH
Q psy15068 548 SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAE 627 (710)
Q Consensus 548 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~ 627 (710)
+..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+.. |+.+++++|+++|++++.+++..|.||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL-GSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 4578899999999999999999999 999999999999999999999 99999999999999999988788999999999
Q ss_pred hCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhhcccccceeehhHHHHhhhcccchhHHHHhhhchhHHHHH
Q psy15068 628 AGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERL 704 (710)
Q Consensus 628 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~~~~ 704 (710)
..|+.+++++|+++|++++.+|..|+||| |+|+..++. ..+.|||++|+..|+.++.++
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl-~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~ 177 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTAL-ELAREILKT-----------------TPKGNPMQFGRRIGLEKVINV 177 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHH-HHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHH-HHHHHhccC-----------------cccccHHHHHHHcCHHHHHHH
Confidence 99999999999999999999999999999 999965542 345799999999999875543
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1.1e-24 Score=204.17 Aligned_cols=172 Identities=21% Similarity=0.163 Sum_probs=153.4
Q ss_pred cccccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHc
Q psy15068 21 SYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQ 100 (710)
Q Consensus 21 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 100 (710)
..+.+++..++..|+.+.+..+...+.++ +..|.||||.|++.|+.++|++|++ ++ +++.+|..|+||||+|+..
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~ 87 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLLE-DR-DVDAVDENGRTALLFVAGL 87 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHHH---HHHHHHHHHHHHTTTCHHHHHHTTT-TC-CTTCBCTTSCBHHHHHHHH
T ss_pred CCCccHHHHHHHcCCCccccccccccccc---ccCCCCHHHHHHHcCCHHHHHHHHc-CC-CCCCcCCCCCCHHHHHHHC
Confidence 44567788888888888887776655444 3569999999999999999999999 88 9999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHH
Q psy15068 101 GLYKMVTLLIHHGANVNDRD-EKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179 (710)
Q Consensus 101 g~~~~v~~Ll~~g~~~~~~~-~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~ 179 (710)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.++|++|+++|++++.++..|.|||++|+..+..
T Consensus 88 g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~---------- 157 (244)
T 3ui2_A 88 GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT---------- 157 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT----------
T ss_pred CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc----------
Confidence 99999999999999999998 8899999999999999999999999999999999999999999875511
Q ss_pred HHHHcCCCcccCCCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Q psy15068 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKAD 221 (710)
Q Consensus 180 ~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~g~~ 221 (710)
. .+.+||++|+..|+.+++++|++.+.+
T Consensus 158 -------------~-~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 158 -------------T-PKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp -------------C-CCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred -------------c-CCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 1 678999999999999999999986543
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=9.1e-23 Score=196.55 Aligned_cols=131 Identities=19% Similarity=0.226 Sum_probs=85.3
Q ss_pred hhcCchHHHHHHHhcCCcccc------cCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCC
Q psy15068 526 VRSNKYDEVKKNIEDGACVNV------SSERRGSALIYVAWK---GYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596 (710)
Q Consensus 526 ~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 596 (710)
+..++.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|+++|++++.+|..|+||||+|+.. |
T Consensus 159 ~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~-g 237 (301)
T 2b0o_E 159 ICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALY-N 237 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHT-T
T ss_pred hhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc-C
Confidence 666666666666666666665 466666777777765 666777777777777776676777777777766 6
Q ss_pred chHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068 597 NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS 665 (710)
Q Consensus 597 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~ 665 (710)
+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++ .|.||| |+|+..|+
T Consensus 238 ~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpL-h~A~~~g~ 298 (301)
T 2b0o_E 238 QPDCLKLLLKGRALVGTVN-EAGETALDIARKKHHKECEELLEQAQAG------TFAFPL-HVDYSWVI 298 (301)
T ss_dssp CHHHHHHHHHTTCCCSCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCC-C-------
T ss_pred CHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChh-HHHHhcCC
Confidence 7777777777777777666 6677777777777777777777776665 466777 77666553
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.1e-23 Score=174.46 Aligned_cols=115 Identities=20% Similarity=0.113 Sum_probs=104.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHH
Q psy15068 548 SERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAE 627 (710)
Q Consensus 548 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~ 627 (710)
+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~d-~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC-GQLEILEFLLLKGADINAPD-KHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHT-TCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCCcCC-CCCCCHHHHHH
Confidence 45678999999999999999999999999999999999999999998 99999999999999999999 99999999999
Q ss_pred hCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh
Q psy15068 628 AGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS 665 (710)
Q Consensus 628 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~ 665 (710)
..|+.+++++|+++|++++.+|..|.||| |+|+..+.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l-~~A~~~~~ 118 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKTVKGPDGLTAF-EATDNQAI 118 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHH-HHCCCHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHH-HHhCCHHH
Confidence 99999999999999999999999999999 99965554
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=3.6e-23 Score=171.36 Aligned_cols=114 Identities=32% Similarity=0.379 Sum_probs=99.9
Q ss_pred cccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068 53 KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACY 132 (710)
Q Consensus 53 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~ 132 (710)
+..|.||||.|+..|+.+++++|++.++ +++.++..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCC-CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 4567899999999999999999999988 889999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCccccccCCCchhHHhhhcc
Q psy15068 133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167 (710)
Q Consensus 133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~ 167 (710)
.|+.+++++|+++|++++.++..|.||+++|...+
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 99999999999999999999999999999886544
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=2.1e-23 Score=195.44 Aligned_cols=135 Identities=19% Similarity=0.178 Sum_probs=124.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHh
Q psy15068 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEA 628 (710)
Q Consensus 549 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 628 (710)
..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+.. |+.++|++|+++|++++.+++..|.||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGL-GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHH-TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 568899999999999999999999 999999999999999999999 999999999999999999887889999999999
Q ss_pred CCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhhcccccceeehhHHHHhhhcccchhHHHHhhhchhHHHH
Q psy15068 629 GKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLER 703 (710)
Q Consensus 629 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~~~~L~~~~g~~~~~~~~~~~G~t~l~~a~~~~~~~~~~ 703 (710)
.|+.+++++|+++|++++.+|..|+||| |+|+..+ .+..|.|||++|+..|+.++.+
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l-~~A~~~~-----------------~~~~~~~~l~~a~~~g~~~iv~ 177 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTAL-ELAREIL-----------------KTTPKGNPMQFGRRIGLEKVIN 177 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHH-HHHHHHH-----------------TTCCCSSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHH-HHHHHHH-----------------hccCCCCHHHHHHHcChHHHHH
Confidence 9999999999999999999999999999 9998432 3456789999999999988544
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=7.6e-24 Score=196.27 Aligned_cols=136 Identities=21% Similarity=0.106 Sum_probs=115.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHc-CCCCCCCCCCCCCCHhH
Q psy15068 546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH-GAYYDMKDGKTGKTPLK 624 (710)
Q Consensus 546 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~ 624 (710)
..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.. |+.++|++|+++ |++++.++ ..|.||||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~g~~~~~~d-~~g~tpL~ 145 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHG-GHKDIVEMLFTQPNIELNQQN-KLGDTALH 145 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHTTSTTCCCCCCC-TTSCCHHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHcCCCCCccccC-CCCCCHHH
Confidence 3466789999999999999999999999999999999999999999999 999999999999 99999999 99999999
Q ss_pred HHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHHHHhhhcccc
Q psy15068 625 HAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIMKVVKNYAGE 687 (710)
Q Consensus 625 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~~~~~~~~G~ 687 (710)
+|+..|+.+++++|+++|++++.+|..|.||| |+|+..++ ++.| +..|+.. +..|.+|.
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l-~~A~~~~~~~~l~~l-~~~~~~~--~~~~~~~~ 207 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLAF-DMATNAACASLLKKK-QGTDAVR--TLSNAEDY 207 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHH-HHCCSHHHHHHHC--------------------
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCHH-HHhcchhHHHHHHHH-hccchhh--hccchhhh
Confidence 99999999999999999999999999999999 99999998 8999 9999999 77776653
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=6.3e-23 Score=197.68 Aligned_cols=143 Identities=20% Similarity=0.215 Sum_probs=119.1
Q ss_pred cccchhHHHHHHhcCCHHHHHHHHhcCCCCCcc------ccCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCCCCCC
Q psy15068 53 KSVELTLLCSAVWDNKIREVEFLLSTGDHDVNE------KLQDGRTALYMAILQ---GLYKMVTLLIHHGANVNDRDEKG 123 (710)
Q Consensus 53 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~ 123 (710)
.....++|+.|+..|+.+.|+.|++.++ +++. .+..|+||||+|+.. |+.+++++|+++|++++.+|..|
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~-d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G 226 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 226 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCC-cccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC
Confidence 3445678999999999999999999988 8887 688899999999987 88999999999999999999999
Q ss_pred CCHHHHHHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCCCCCCCCHHHHH
Q psy15068 124 YTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFA 203 (710)
Q Consensus 124 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~A 203 (710)
.||||+|+..|+.++|++|+++|++++.+|..|.|||++|+..+ +.+++++|+++|++ .|.||||+|
T Consensus 227 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~------~~~iv~~Ll~~ga~-------~g~tpLh~A 293 (301)
T 2b0o_E 227 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKH------HKECEELLEQAQAG-------TFAFPLHVD 293 (301)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHT------CHHHHHHHHHHHHH-------TTSSCCC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC------CHHHHHHHHHhcCC-------CCCChhHHH
Confidence 99999999999999999999999999999999999999999998 89999999999888 567899999
Q ss_pred HHhCCH
Q psy15068 204 VVKKNL 209 (710)
Q Consensus 204 ~~~~~~ 209 (710)
+..|+.
T Consensus 294 ~~~g~~ 299 (301)
T 2b0o_E 294 YSWVIS 299 (301)
T ss_dssp ------
T ss_pred HhcCCc
Confidence 988764
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.6e-22 Score=187.35 Aligned_cols=135 Identities=21% Similarity=0.177 Sum_probs=116.5
Q ss_pred CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCCCCCCCCCCHHHH
Q psy15068 51 SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH-GANVNDRDEKGYTPLHL 129 (710)
Q Consensus 51 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~ 129 (710)
..+..|.||||.|+..|+.++|++|++.|+ +++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|.||||+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRV-GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 446678999999999999999999999999 9999999999999999999999999999999 99999999999999999
Q ss_pred HHhcCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCCCcccCC
Q psy15068 130 ACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM 192 (710)
Q Consensus 130 A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~~~~~~~ 192 (710)
|+..|+.++|++|+++|++++.++..|.|||++|+..+ ..++++.|++.++.....+
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~------~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAA------CASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHH------HHHHHC-------------
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchh------HHHHHHHHhccchhhhccc
Confidence 99999999999999999999999999999999999999 9999999999888765443
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=2.8e-21 Score=183.95 Aligned_cols=117 Identities=25% Similarity=0.321 Sum_probs=108.4
Q ss_pred hhcCchHHHHHHHhcCCccc------ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCC
Q psy15068 526 VRSNKYDEVKKNIEDGACVN------VSSERRGSALIYVAWK---GYEEIVDLLLDNGADVNFKSATGFTALHMACRFHS 596 (710)
Q Consensus 526 ~~~~~~~~~~~ll~~~~~~~------~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 596 (710)
+..++.+.++.+++.|.+++ ..+..|.||||+|+.. |+.+++++|+++|+++|.+|..|+||||+|+.. |
T Consensus 138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~-g 216 (278)
T 1dcq_A 138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT-D 216 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHT-T
T ss_pred hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHc-C
Confidence 88999999999999998844 4478899999999999 899999999999999999999999999999998 9
Q ss_pred chHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhc
Q psy15068 597 NDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNL 644 (710)
Q Consensus 597 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 644 (710)
+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++
T Consensus 217 ~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 217 NAECLKLLLRGKASIEIAN-ESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCCCcc-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999 9999999999999999999999999885
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.5e-21 Score=152.06 Aligned_cols=93 Identities=41% Similarity=0.563 Sum_probs=85.8
Q ss_pred cchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcC
Q psy15068 55 VELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134 (710)
Q Consensus 55 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g 134 (710)
+|+||||.|+..|+.+++++|++.|+ +++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 47899999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q psy15068 135 NKNIVKFLLSKKAD 148 (710)
Q Consensus 135 ~~~iv~~Ll~~g~~ 148 (710)
+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999874
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=3.5e-22 Score=196.29 Aligned_cols=147 Identities=18% Similarity=0.133 Sum_probs=102.4
Q ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHHcCCCCcccC--CCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhH
Q psy15068 548 SERRGSALIYVAWK-GYEEIVDLLLDNGADVNFKS--ATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLK 624 (710)
Q Consensus 548 ~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 624 (710)
...+.|+||.|+.. ++.+++++|+++|++++..+ ..|.||||+|+.. ++.+++++|+++|++++..+ ..|.||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~-g~~~iv~~LL~~Gadvn~~d-~~G~TpLh 273 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAA-NSLLACEFLLQNGANVNQAD-SAGRGPLH 273 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHC-CCHHHHHHHHHcCCCCCCCC-CCCCCHHH
Confidence 34556788888888 88888888888888888877 7888888888887 88888888888888888888 88888888
Q ss_pred HHHhCCChhHHHHHHhhhhccccCCCCCCCchhhHHHHhhh---cccccceeehhHH-HHhhhcccchhHHHHhhhch
Q psy15068 625 HAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNS---AKQLGLVHVFEIM-KVVKNYAGETLIGVARKMNY 698 (710)
Q Consensus 625 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~~A~~~~~---~~~L~~~~g~~~~-~~~~~~~G~t~l~~a~~~~~ 698 (710)
+|+..|+.+++++|+++|++++.+|..|.||| |+|+..++ +++| +.+|.... ....+..|.|+++++..-..
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL-~~A~~~g~~~iv~lL-l~~~~~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPL-TIAMETANADIVTLL-RLAKMREAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH-HHHHHTTCHHHHHHH-HHHHC------------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHH-HHHHHCCCHHHHHHH-HHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence 88888888888888888888888888888888 88888887 7777 77653321 15567778888888766544
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=2.2e-21 Score=151.17 Aligned_cols=93 Identities=38% Similarity=0.508 Sum_probs=88.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhC
Q psy15068 550 RRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAG 629 (710)
Q Consensus 550 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 629 (710)
+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN-GHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHc
Confidence 478999999999999999999999999999999999999999999 99999999999999999999 9999999999999
Q ss_pred CChhHHHHHHhhhhc
Q psy15068 630 KNRDIIDLLHLIDNL 644 (710)
Q Consensus 630 ~~~~~v~~Ll~~g~~ 644 (710)
|+.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999875
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=6.7e-21 Score=187.22 Aligned_cols=148 Identities=22% Similarity=0.272 Sum_probs=112.2
Q ss_pred hhc-CchHHHHHHHhcCCcccccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHH
Q psy15068 526 VRS-NKYDEVKKNIEDGACVNVSS--ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR 602 (710)
Q Consensus 526 ~~~-~~~~~~~~ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~ 602 (710)
+.. ++.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+.. ++.++++
T Consensus 207 a~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~-g~~~~v~ 285 (368)
T 3jue_A 207 SGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL-GHTGLAC 285 (368)
T ss_dssp TSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-TCHHHHH
T ss_pred HHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CcHHHHH
Confidence 888 99999999999999999998 8899999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhh---hccccCCCCCCCchhhHHHHhhh-----cccccceee
Q psy15068 603 KLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLID---NLFASVTNPYDPNVYHRIELMNS-----AKQLGLVHV 674 (710)
Q Consensus 603 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~~A~~~~~-----~~~L~~~~g 674 (710)
+|+++|++++..+ ..|.||||+|+..++.+++++|++.+ .+....+..+.|++ +++..... .+.| ...+
T Consensus 286 ~LL~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l-~i~~~~~~~~~~~~ekl-~r~~ 362 (368)
T 3jue_A 286 LFLKRGADLGARD-SEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYL-DIFRDFSLMASDDPEKL-SRRS 362 (368)
T ss_dssp HHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------------------------
T ss_pred HHHHCcCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHH-HHHHHHHhhcCCCHHHH-HhcC
Confidence 9999999999999 99999999999999999999999876 44556678889999 87776554 5666 5555
Q ss_pred hhH
Q psy15068 675 FEI 677 (710)
Q Consensus 675 ~~~ 677 (710)
.++
T Consensus 363 ~~~ 365 (368)
T 3jue_A 363 HDL 365 (368)
T ss_dssp ---
T ss_pred CCc
Confidence 554
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=1.4e-21 Score=159.50 Aligned_cols=109 Identities=30% Similarity=0.354 Sum_probs=96.7
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHH
Q psy15068 546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKH 625 (710)
Q Consensus 546 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 625 (710)
.++.+|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.. ++.+++++|+++|++++..+ ..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~-~~~~~~~~Ll~~g~~~~~~d-~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKN-GHAEIVKLLLAKGADVNARS-KDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTT-TCHHHHHHHTTTTCCTTCCC-TTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHcCCCCcccC-CCCCCHHHH
Confidence 4677889999999999999999999999999999999999999999998 89999999999999999888 889999999
Q ss_pred HHhCCChhHHHHHHhhhhccccCCCCCCCch
Q psy15068 626 AEAGKNRDIIDLLHLIDNLFASVTNPYDPNV 656 (710)
Q Consensus 626 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 656 (710)
|+..++.+++++|+++|+++|.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999998874
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=2.1e-20 Score=177.87 Aligned_cols=167 Identities=19% Similarity=0.227 Sum_probs=92.7
Q ss_pred cceecccccccccchhhhhhcChhhHHHHHHhhhcc-----CCCc--------------------------cccchhHHH
Q psy15068 13 LVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIIN-----SSSA--------------------------KSVELTLLC 61 (710)
Q Consensus 13 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~-----~~~~--------------------------~~~~~t~L~ 61 (710)
.+.+...+....+.+..+...|+....+++-..-.. +... +....++|+
T Consensus 56 ~v~s~~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~ 135 (278)
T 1dcq_A 56 RMQSLTLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLC 135 (278)
T ss_dssp CEEETTTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred eeeeeecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence 455566677777889999888887666554321111 1100 011224555
Q ss_pred HHHhcCCHHHHHHHHhcCCCC------CccccCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHh
Q psy15068 62 SAVWDNKIREVEFLLSTGDHD------VNEKLQDGRTALYMAILQ---GLYKMVTLLIHHGANVNDRDEKGYTPLHLACY 132 (710)
Q Consensus 62 ~A~~~g~~~~v~~Ll~~~~~~------~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~ 132 (710)
.|+..|+.+.++.+++.|+ + ++..+..|+||||+|+.. |+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 136 ~a~~~~d~~~~~~ll~~g~-~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGV-DLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCL 214 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTC-CTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHH
T ss_pred hHhhhcccHHHHHHHHhhc-chhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHH
Confidence 5555555555555555555 4 223345555555555555 55555555555555555555555555555555
Q ss_pred cCCHHHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCCHHHHHHHHHHcCC
Q psy15068 133 LGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA 186 (710)
Q Consensus 133 ~g~~~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~Ll~~~~ 186 (710)
.|+.++|++|+++|++++.+|..|.|||++|+..+ +.+++++|+++|+
T Consensus 215 ~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~------~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 215 TDNAECLKLLLRGKASIEIANESGETPLDIAKRLK------HEHCEELLTQALS 262 (278)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------CHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC------CHHHHHHHHHcCC
Confidence 55555555555555555555555555555555555 5555555555544
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=2.6e-21 Score=201.33 Aligned_cols=126 Identities=19% Similarity=0.251 Sum_probs=70.5
Q ss_pred HHHHHhhhcCchHHHHHHHhcCCccccc------CCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCcccCCCCCcHHHH
Q psy15068 520 LDFLKNVRSNKYDEVKKNIEDGACVNVS------SERRGSALIYVAW---KGYEEIVDLLLDNGADVNFKSATGFTALHM 590 (710)
Q Consensus 520 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~------~~~g~t~L~~A~~---~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 590 (710)
..++.++..++.+.++.|++.|+++|.. +..|.||||+|+. .|+.+++++|+++|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 3455555555555555555555555544 4555555555543 555555555555555555555555555555
Q ss_pred HHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHhHHHHhCCChhHHHHHHhhhhcccc
Q psy15068 591 ACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFAS 647 (710)
Q Consensus 591 A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 647 (710)
|+.. |+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.
T Consensus 214 A~~~-g~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 214 AALY-NQPDCLKLLLKGRALVGTVN-EAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HTTT-TCHHHHHHHHHTCCCCSCCC-TTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHc-CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 5555 55555555555555555555 5555555555555555555555555555554
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=5.6e-21 Score=198.86 Aligned_cols=126 Identities=24% Similarity=0.226 Sum_probs=67.4
Q ss_pred cchhhhhhcChhhHHHHHHhhhccCCCc------cccchhHHHHHHh---cCCHHHHHHHHhcCCCCCccccCCCCcHHH
Q psy15068 25 HHLFSEIMFSEEDAFGYFLQGIINSSSA------KSVELTLLCSAVW---DNKIREVEFLLSTGDHDVNEKLQDGRTALY 95 (710)
Q Consensus 25 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~------~~~~~t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 95 (710)
+.|+.|+..|+.+.++.|++.|++++.. +..|.||||.|+. .|+.++|++|+++|+ ++|.+|..|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga-~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-HLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC-CTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC-CCCccCCCCCcHHH
Confidence 3455555555555555555555555544 4455555555533 555555555555555 55555555555555
Q ss_pred HHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhCCCCccc
Q psy15068 96 MAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151 (710)
Q Consensus 96 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~ 151 (710)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 55555555555555555555555555555555555555555555555555555443
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=4.4e-21 Score=156.62 Aligned_cols=108 Identities=39% Similarity=0.445 Sum_probs=100.3
Q ss_pred CccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Q psy15068 51 SAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130 (710)
Q Consensus 51 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A 130 (710)
.+|.+|.||||.|+..|+.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTC-CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 467889999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHhCCCCccccccCCCch
Q psy15068 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTP 159 (710)
Q Consensus 131 ~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 159 (710)
+..|+.+++++|+++|++++.++..+.+|
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 99999999999999999999998888876
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=3.2e-18 Score=137.71 Aligned_cols=93 Identities=30% Similarity=0.391 Sum_probs=84.6
Q ss_pred CCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Q psy15068 49 SSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLH 128 (710)
Q Consensus 49 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~ 128 (710)
+...+.+|.|+||.|+..|+.+++++|++.++ +++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGA-DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 45567789999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHH
Q psy15068 129 LACYLGNKNIVKFL 142 (710)
Q Consensus 129 ~A~~~g~~~iv~~L 142 (710)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=6.7e-18 Score=135.82 Aligned_cols=93 Identities=33% Similarity=0.450 Sum_probs=83.9
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCCchHHHHHHHHcCCCCCCCCCCCCCCHh
Q psy15068 544 VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623 (710)
Q Consensus 544 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 623 (710)
....+.+|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.. ++.+++++|+++|++++.++ ..|.|||
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~-~~~~~v~~Ll~~ga~~~~~d-~~g~tpl 94 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARN-GHLEVVKLLLEAGADVXAQD-KFGKTAF 94 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHTTCCTTCCC-TTSCCHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCccccc-cCCCcHH
Confidence 345678899999999999999999999999999999999999999999999 99999999999999999999 9999999
Q ss_pred HHHHhCCChhHHHHH
Q psy15068 624 KHAEAGKNRDIIDLL 638 (710)
Q Consensus 624 ~~A~~~~~~~~v~~L 638 (710)
|+|+..|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999987
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=31.71 E-value=37 Score=19.59 Aligned_cols=19 Identities=11% Similarity=0.039 Sum_probs=14.4
Q ss_pred HHHHHHhcCCHHHHHHHHh
Q psy15068 59 LLCSAVWDNKIREVEFLLS 77 (710)
Q Consensus 59 ~L~~A~~~g~~~~v~~Ll~ 77 (710)
-+..|+..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3567888888888887743
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=30.89 E-value=1.6e+02 Score=24.63 Aligned_cols=108 Identities=10% Similarity=0.033 Sum_probs=67.0
Q ss_pred cccchhhhhhcChhhHHHHHHhhhccCCCccccchhHHHHHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCc
Q psy15068 23 RHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGL 102 (710)
Q Consensus 23 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~ 102 (710)
..+=|..|...|+++..-.+.+..- ......+.=..|...|++++++....+-. ++. ..+.+....|+
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~l~----~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~-D~~-------~L~~Ly~~tg~ 75 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKKLN----DSITWERLIQEALAQGNASLAEMIYQTQH-SFD-------KLSFLYLVTGD 75 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHC----CHHHHHHHHHHHHHTTCHHHHHHHHHHTT-CHH-------HHHHHHHHHTC
T ss_pred hHHHHHHHHhcCCHHHHHHHHHHhC----CHHHHHHHHHHHHHcCChHHHHHHHHHhC-CHH-------HHHHHHHHhCC
Confidence 4566788889999888877765331 11234455667778899999998888754 222 23444455677
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCH-HHHHHHHhCC
Q psy15068 103 YKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK-NIVKFLLSKK 146 (710)
Q Consensus 103 ~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~-~iv~~Ll~~g 146 (710)
.+-++.+.+.- ....+.+.+++.+...|++ +.++.|.+.|
T Consensus 76 ~e~L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 76 VNKLSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp HHHHHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCC
Confidence 67666664320 1111234577777777776 4677777654
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=26.00 E-value=1.6e+02 Score=28.34 Aligned_cols=63 Identities=27% Similarity=0.436 Sum_probs=35.2
Q ss_pred HHHhcCCHHHHHHHHhcCCCCCccccCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHhcCCHHHHHH
Q psy15068 62 SAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141 (710)
Q Consensus 62 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~iv~~ 141 (710)
..+..|+...|+..+..|. +++.+- |.-..+..+ . .+ . -..|.|-+|.|++..+.+++..
T Consensus 28 ~gv~e~~~~~ve~y~~~gg-~~~r~l----t~~e~~lln-----------~-~~--a-f~~g~tlvhlair~~r~~~l~~ 87 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGG-DIARQL----TADEVRLLN-----------R-PS--A-FDVGYTLVHLAIRFQRQDMLAI 87 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTC-CTTCCC----CHHHHHHHC-----------C-TT--T-CCTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCC-chhccc----CHHHHHHhC-----------C-Cc--c-cccCchhhhhhhhhhhhhHHHH
Confidence 3456788888888888887 655432 222221111 1 11 1 1235566666666666666666
Q ss_pred HHh
Q psy15068 142 LLS 144 (710)
Q Consensus 142 Ll~ 144 (710)
|+.
T Consensus 88 ll~ 90 (454)
T 3zrh_A 88 LLT 90 (454)
T ss_dssp HHH
T ss_pred hhh
Confidence 665
No 118
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=25.56 E-value=14 Score=28.27 Aligned_cols=33 Identities=15% Similarity=-0.049 Sum_probs=23.6
Q ss_pred ccCCCccccchhHHHHHHhcCCHHHHHHHHhcC
Q psy15068 47 INSSSAKSVELTLLCSAVWDNKIREVEFLLSTG 79 (710)
Q Consensus 47 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~ 79 (710)
+.+..+|....-++..|+.+++.++++-||+..
T Consensus 26 I~L~KkDkLykDAietAa~S~d~elaEeLL~yF 58 (125)
T 3qil_A 26 VELAKKDSLYKDAMQYASESKDTELAEELLQWF 58 (125)
T ss_dssp CCCCSCCCCSSHHHHTTTSSCCSHHHHHHHHHH
T ss_pred HHHHHhcccHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 455566666677788888888888887777763
No 119
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=23.07 E-value=1.6e+02 Score=29.87 Aligned_cols=132 Identities=8% Similarity=0.012 Sum_probs=0.0
Q ss_pred hhHHHHHHhhhccCCCccccchhHHHHHHhcCC--------------HHHHHHHHhcCCCCCccccCCCCcHHHHHHHcC
Q psy15068 36 EDAFGYFLQGIINSSSAKSVELTLLCSAVWDNK--------------IREVEFLLSTGDHDVNEKLQDGRTALYMAILQG 101 (710)
Q Consensus 36 ~~~~~~ll~~~~~~~~~~~~~~t~L~~A~~~g~--------------~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g 101 (710)
..+++.+.+.|+.++.. -.+.|..|+..+. .++.+.+.+.|. .++.... .+.+...++.|
T Consensus 46 ~~lf~~M~~~Gv~pd~~---tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~-~Pd~~ty--n~lI~~~~~~g 119 (501)
T 4g26_A 46 LRLYDEARRNGVQLSQY---HYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKV-VPNEATF--TNGARLAVAKD 119 (501)
T ss_dssp HHHHHHHHHHTCCCCHH---HHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTC-CCCHHHH--HHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCHh---HHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCC-CCCHHHH--HHHHHHHHhcC
Q ss_pred cHHHHHHHHHc----CCCCCCCCCCCCCHHHHHHhcCCH----HHHHHHHhCCCCccccccCCCchhHHhhhccCCCCCC
Q psy15068 102 LYKMVTLLIHH----GANVNDRDEKGYTPLHLACYLGNK----NIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTD 173 (710)
Q Consensus 102 ~~~~v~~Ll~~----g~~~~~~~~~~~t~L~~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~~~l~~a~~~~~~~~~~ 173 (710)
+.+-+..+++. |..++...-. +.+...+..|.. ++.+.+.+.|..++..... +.+...+..|
T Consensus 120 ~~~~A~~l~~~M~~~g~~Pd~~tyn--~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~--~Li~~~~~~g------ 189 (501)
T 4g26_A 120 DPEMAFDMVKQMKAFGIQPRLRSYG--PALFGFCRKGDADKAYEVDAHMVESEVVPEEPELA--ALLKVSMDTK------ 189 (501)
T ss_dssp CHHHHHHHHHHHHHTTCCCCHHHHH--HHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHH--HHHHHHHHTT------
T ss_pred CHHHHHHHHHHHHHcCCCCccceeh--HHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHH--HHHHHHhhCC------
Q ss_pred HHHHHHHHHH
Q psy15068 174 TNEIISMLIE 183 (710)
Q Consensus 174 ~~~~~~~Ll~ 183 (710)
..+-+..+++
T Consensus 190 ~~d~A~~ll~ 199 (501)
T 4g26_A 190 NADKVYKTLQ 199 (501)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Done!