RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy15068
(710 letters)
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can
range from 2 to over 20 (ankyrins, for example). ANK
repeats may occur in combinations with other types of
domains. The structural repeat unit contains two
antiparallel helices and a beta-hairpin, repeats are
stacked in a superhelical arrangement; this alignment
contains 4 consecutive repeats.
Length = 126
Score = 100 bits (251), Expect = 4e-25
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 84 NEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
N + +DGRT L++A G ++V LL+ +GA+VN +D G TPLHLA G+ IVK LL
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60
Query: 144 SKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
K ADV A+ TP+ LA +++ +L+++GA+V + +PLH
Sbjct: 61 EKGADVNARDKDGNTPLHLAARNGN-------LDVVKLLLKHGADVNARDKD-GRTPLHL 112
Query: 203 AVVKKNLSVVELLI 216
A +L VV+LL+
Sbjct: 113 AAKNGHLEVVKLLL 126
Score = 92.1 bits (229), Expect = 4e-22
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
T L A + + V+ LL G DVN K DGRT L++A G ++V LL+ GA+VN
Sbjct: 9 TPLHLAASNGHLEVVKLLLENGA-DVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN 67
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNE 176
RD+ G TPLHLA GN ++VK LL ADV A+ TP+ LA E
Sbjct: 68 ARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG-------HLE 120
Query: 177 IISMLI 182
++ +L+
Sbjct: 121 VVKLLL 126
Score = 79.7 bits (197), Expect = 8e-18
Identities = 43/113 (38%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
+ + VK +E+GA VN + L A G+ EIV LLL+ GADVN + G
Sbjct: 15 ASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGN 74
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
T LH+A R + N ++V+ LL HGA + +D K G+TPL A + +++ LL
Sbjct: 75 TPLHLAAR-NGNLDVVKLLLKHGADVNARD-KDGRTPLHLAAKNGHLEVVKLL 125
Score = 77.4 bits (191), Expect = 5e-17
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
+PLH A +L VV+LL++ AD N + PL A ++ ++IV+ L
Sbjct: 6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPL-HLAAKNGHLEIVKLLLEKGA 64
Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
DV+ D D N+ LH A GNL +V++L+K D+NA+++ P+ A G H V
Sbjct: 65 -DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG--HLEV 121
Query: 315 AEYLL 319
+ LL
Sbjct: 122 VKLLL 126
Score = 72.4 bits (178), Expect = 3e-15
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD 612
+ L A G+ E+V LLL+NGADVN K G T LH+A + + + IV+ LL GA +
Sbjct: 9 TPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAK-NGHLEIVKLLLEKGADVN 67
Query: 613 MKDGKTGKTPLKHAEAGKNRDIIDLL 638
+D K G TPL A N D++ LL
Sbjct: 68 ARD-KDGNTPLHLAARNGNLDVVKLL 92
Score = 71.3 bits (175), Expect = 8e-15
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 372 NAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYA 431
NA +D TPL AA + L+ K L++ GA+VN D R+ L A
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK-------------DNDGRTPLHLA 47
Query: 432 CKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
K+ ++E+VKLLL GADVN +K PL +A ++G+ +VK L +GA ++ +
Sbjct: 48 AKN-GHLEIVKLLLEKGADVNAR-DKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDK 104
Score = 65.5 bits (160), Expect = 7e-13
Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 62/187 (33%)
Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
D D + LH A G+L++V++L++ D+NA++ P+ A G H + + L
Sbjct: 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNG--HLEIVKLL 59
Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
L++ + ++NA D
Sbjct: 60 LEKGA----------------------------------------------DVNARDKDG 73
Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
TPL AA++ +L K L++ GA+VN D R+ L A K+ ++
Sbjct: 74 NTPLHLAARNGNLDVVKLLLKHGADVNA-------------RDKDGRTPLHLAAKN-GHL 119
Query: 439 EMVKLLL 445
E+VKLLL
Sbjct: 120 EVVKLLL 126
Score = 57.8 bits (140), Expect = 4e-10
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQ 484
R+ L A + ++E+VKLLL +GADVN + + PL +A ++G +IVK L GA
Sbjct: 8 RTPLHLAASN-GHLEVVKLLLENGADVNAK-DNDGRTPLHLAAKNGHLEIVKLLLEKGAD 65
Query: 485 IDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACV 544
++ + N T L R+ D VK ++ GA V
Sbjct: 66 VNARDKDGN----------TPL----------------HLAARNGNLDVVKLLLKHGADV 99
Query: 545 NVSSERRGSALIYVAWKGYEEIVDLLL 571
N + + L A G+ E+V LLL
Sbjct: 100 NARDKDGRTPLHLAAKNGHLEVVKLLL 126
Score = 45.5 bits (108), Expect = 8e-06
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDL 637
N + G T LH+A + + +V+ LL +GA + KD G+TPL A + +I+ L
Sbjct: 1 NARDEDGRTPLHLAAS-NGHLEVVKLLLENGADVNAKD-NDGRTPLHLAAKNGHLEIVKL 58
Query: 638 L 638
L
Sbjct: 59 L 59
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies).
Length = 91
Score = 79.2 bits (196), Expect = 5e-18
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
L A + + V+ LL G DVN L D TAL++A G ++V LL+ HGA+VN +
Sbjct: 1 LHLAAKNGNLELVKLLLEKGA-DVN--LGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
D+ G T LHLA GN IVK LL AD+ K
Sbjct: 58 DKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90
Score = 74.6 bits (184), Expect = 2e-16
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGF 585
++ + VK +E GA VN+ +AL A G EIV LLL++GADVN K G
Sbjct: 5 AKNGNLELVKLLLEKGADVNLG--DTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGN 62
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
TALH+A R + N IV+ LL HGA ++KD
Sbjct: 63 TALHLAAR-NGNLEIVKLLLEHGADINLKD 91
Score = 74.6 bits (184), Expect = 2e-16
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 17/108 (15%)
Query: 382 LLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
L AAK+ +L+ K L++KGA+VNL +T +AL A ++ N+E+V
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDT---------------DTALHLAARN-GNLEIV 44
Query: 442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
KLLL HGADVN +K L +A ++G+ +IVK L +GA I+ ++
Sbjct: 45 KLLLEHGADVNAK-DKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 69.6 bits (171), Expect = 1e-14
Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 94 LYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
L++A G ++V LL+ GA+VN D T LHLA GN IVK LL ADV AK
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAKD 58
Query: 154 SMMVTPI-LAVSANMSEDSTDTNEIISMLIENGANVREK 191
T + LA EI+ +L+E+GA++ K
Sbjct: 59 KDGNTALHLAARNG-------NLEIVKLLLEHGADINLK 90
Score = 68.8 bits (169), Expect = 2e-14
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 200 LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSI 259
LH A NL +V+LL++ AD NL + + L A + +++IV+ L DV+
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLG---DTDTALHLAARNGNLEIVKLLLE-HGADVNA 56
Query: 260 SDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
D D N+ LH A GNL+IV++L++ DIN ++
Sbjct: 57 KDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 61.1 bits (149), Expect = 1e-11
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 555 LIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMK 614
L A G E+V LLL+ GADVN TALH+A R + N IV+ LL HGA + K
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAAR-NGNLEIVKLLLEHGADVNAK 57
Query: 615 DGKTGKTPLKHAEAGKNRDIIDLL 638
D K G T L A N +I+ LL
Sbjct: 58 D-KDGNTALHLAARNGNLEIVKLL 80
Score = 58.8 bits (143), Expect = 6e-11
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
L A ++ ++++V+ L ++ GD ++ LH A GNL+IV++L++ D+NA+
Sbjct: 1 LHLAAKNGNLELVKLLLEK---GADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
++ + A G + + + LL+ ++NL
Sbjct: 58 DKDGNTALHLAARNG--NLEIVKLLLEHG-ADINL 89
Score = 57.7 bits (140), Expect = 2e-10
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 16/96 (16%)
Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
+++K ++++ ++N D T L AA++ +L+ K L++ GA+VN
Sbjct: 11 ELVKLLLEKGADVNL--GDTDTALHLAARNGNLEIVKLLLEHGADVN------------- 55
Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDT 454
+ D +AL A ++ N+E+VKLLL HGAD+N
Sbjct: 56 AKDKDGNTALHLAARN-GNLEIVKLLLEHGADINLK 90
Score = 52.6 bits (127), Expect = 1e-08
Identities = 36/135 (26%), Positives = 49/135 (36%), Gaps = 44/135 (32%)
Query: 127 LHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGA 186
LHLA GN +VK LL K ADV TDT
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLG------------------DTDT------------ 30
Query: 187 NVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIV 246
LH A NL +V+LL++ AD N K L A + +++IV
Sbjct: 31 ------------ALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTA-LHLAARNGNLEIV 77
Query: 247 EAFLNSKNFDVSISD 261
+ L D+++ D
Sbjct: 78 KLLL-EHGADINLKD 91
Score = 50.7 bits (122), Expect = 4e-08
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
T L A + + V+ LL G DVN K +DG TAL++A G ++V LL+ HGA++N
Sbjct: 30 TALHLAARNGNLEIVKLLLEHG-ADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADIN 88
Query: 118 DRD 120
+D
Sbjct: 89 LKD 91
Score = 50.7 bits (122), Expect = 5e-08
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 50/140 (35%)
Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVN 327
LH A GNL++V++L+++ D+N + + A G + + + LL+ +
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDTDT--ALHLAARNG--NLEIVKLLLEHGA---- 52
Query: 328 LPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAK 387
++NA+ D T L AA+
Sbjct: 53 ------------------------------------------DVNAKDKDGNTALHLAAR 70
Query: 388 HCDLQSAKYLIQKGANVNLT 407
+ +L+ K L++ GA++NL
Sbjct: 71 NGNLEIVKLLLEHGADINLK 90
Score = 49.9 bits (120), Expect = 8e-08
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 428 LQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDK 487
L A K+ N+E+VKLLL GADVN L +A ++G+ +IVK L +GA ++
Sbjct: 1 LHLAAKN-GNLELVKLLLEKGADVNLGDTDT---ALHLAARNGNLEIVKLLLEHGADVNA 56
Query: 488 ENYLKN 493
++ N
Sbjct: 57 KDKDGN 62
>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional.
Length = 682
Score = 86.3 bits (213), Expect = 2e-17
Identities = 108/447 (24%), Positives = 192/447 (42%), Gaps = 100/447 (22%)
Query: 173 DTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP 232
D I ML+E GA+V K + +P+H+A + N +V LL+ AD N I+ ++
Sbjct: 156 DELLIAEMLLEGGADVNAKDIYC-ITPIHYAAERGNAKMVNLLLSYGADVN-IIALDDLS 213
Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
+L A++S ++ ++A +++++ +I+ DL+ L KA +L+ +L F +N+
Sbjct: 214 VLECAVDSKNIDTIKAIIDNRS---NINKNDLSLL--KAIRNEDLETSLLLYDAGFSVNS 268
Query: 293 QNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQT 352
+ P+ A
Sbjct: 269 IDDCKNTPLHHAS----------------------------------------------- 281
Query: 353 QIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKH-CDLQSAKYLIQKGANVNLTETQK 411
Q L +++ ++++R ++NA+ TPL AK+ D ++ + LI GA+VN
Sbjct: 282 QAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVN------ 335
Query: 412 AFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGD 471
++D + + L A N ++V LL GA+VN + + P+ A +
Sbjct: 336 -------AADRLYITPLHQASTLDRNKDIVITLLELGANVN-ARDYCDKTPIHYAAVRNN 387
Query: 472 FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKY 531
I+ L +YGA I+ + +KI L L +N Y
Sbjct: 388 VVIINTLLDYGADIEALS--------------------QKIGTALHFAL-----CGTNPY 422
Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYE-EIVDLLLDNGADVNFKSATGFTALHM 590
VK I+ GA VN ++ + L Y K + +++++LLDNGADVN + L +
Sbjct: 423 MSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLI 482
Query: 591 ACRFHSNDNIVRKLLHHGAYYDMKDGK 617
A +H IV LLH+GA +++D +
Sbjct: 483 ALEYHG---IVNILLHYGA--ELRDSR 504
Score = 77.4 bits (190), Expect = 1e-14
Identities = 104/393 (26%), Positives = 169/393 (43%), Gaps = 50/393 (12%)
Query: 98 ILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMV 157
I Q + +L+ GA+VN +D TP+H A GN +V LLS ADV
Sbjct: 153 IQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVN------- 205
Query: 158 TPILAVSA-NMSEDSTDTNEI--ISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVEL 214
I+A+ ++ E + D+ I I +I+N +N+ + D S L A+ ++L L
Sbjct: 206 --IIALDDLSVLECAVDSKNIDTIKAIIDNRSNINK----NDLSLLK-AIRNEDLETSLL 258
Query: 215 LIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHV 274
L N I P L A ++ S+ + L + DV+ + + L+
Sbjct: 259 LYDAGFSVNSIDDCKNTP-LHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKN 317
Query: 275 G-NLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP 333
G + + ++ L+ D+NA +R ++ P+ A + R V L + NVN
Sbjct: 318 GYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLL--ELGANVN------ 369
Query: 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD-LQ 392
D + ++ II ++D +I A + T L FA +
Sbjct: 370 ------ARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYM 423
Query: 393 SAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN 452
S K LI +GANVN S + + L YACK ++++++LL +GADVN
Sbjct: 424 SVKTLIDRGANVN-------------SKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVN 470
Query: 453 DTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQI 485
N Q PL +A+ IV L +YGA++
Sbjct: 471 -AINIQNQYPLLIAL--EYHGIVNILLHYGAEL 500
Score = 58.9 bits (142), Expect = 7e-09
Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 31/259 (11%)
Query: 390 DLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGA 449
+L A+ L++ GA+VN + D + + YA + N +MV LLL +GA
Sbjct: 157 ELLIAEMLLEGGADVN-------------AKDIYCITPIHYAAER-GNAKMVNLLLSYGA 202
Query: 450 DVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEER 509
DVN + L A+ S + +K + + ++ N KN + A +LE
Sbjct: 203 DVNIIA-LDDLSVLECAVDSKNIDTIKAIID-----NRSNINKNDLSLLKAIRNEDLETS 256
Query: 510 KKINDL-LKLN-LDFLKNVRSNKYDE-------VKKNIEDGACVNVSSERRGSALIYVAW 560
+ D +N +D KN + + V K +E GA VN + + + L +A
Sbjct: 257 LLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAK 316
Query: 561 KGYE-EIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTG 619
GY+ E + L+ GADVN T LH A N +IV LL GA + +D
Sbjct: 317 NGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARD-YCD 375
Query: 620 KTPLKHAEAGKNRDIIDLL 638
KTP+ +A N II+ L
Sbjct: 376 KTPIHYAAVRNNVVIINTL 394
Score = 38.1 bits (88), Expect = 0.015
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNI-VK 140
+VN + +T ++ A ++ ++ L+ +GA++ +K T LH A N + VK
Sbjct: 367 NVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVK 426
Query: 141 FLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANV 188
L+ + A+V +K + TP+ + ++I ML++NGA+V
Sbjct: 427 TLIDRGANVNSKNKDLSTPLHYACKKNCKL-----DVIEMLLDNGADV 469
>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional.
Length = 471
Score = 78.5 bits (194), Expect = 3e-15
Identities = 83/317 (26%), Positives = 120/317 (37%), Gaps = 75/317 (23%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGN-----KNIVKFLLSKKADVRAKCSMMVTPI 160
V L+ GA+VN R E G TPLHL YL K+IV+ LL ADV A TP+
Sbjct: 30 VRRLLAAGADVNFRGEYGKTPLHL--YLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPL 87
Query: 161 --LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH-----FAVVKKNLSVVE 213
+A T ++I +LI+ GA+V K +PLH F + K V+
Sbjct: 88 HLYLYNAT-------TLDVIKLLIKAGADVNAKD-KVGRTPLHVYLSGFNINPK---VIR 136
Query: 214 LLIKCKADTNLIVKVNQEPLLFFAIESN-SVKIVEAFLNSKNFDVSISDGDLNSLLHKAC 272
LL++ AD N + PL N +V+++ L DV D SLLH
Sbjct: 137 LLLRKGADVNALDLYGMTPLAVLLKSRNANVELLR-LLIDAGADVYAVDDRFRSLLHHHL 195
Query: 273 HV--GNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPI 330
+IV+ L++ D A + P+
Sbjct: 196 QSFKPRARIVRELIRAGCDPAATDMLGNTPLH---------------------------- 227
Query: 331 KRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCD 390
+ T S K V ++ I INA TPL +AA +
Sbjct: 228 -----SMATGSSCKRSLV---------LPLLIAGIS----INARNRYGQTPLHYAAVFNN 269
Query: 391 LQSAKYLIQKGANVNLT 407
++ + LI GA++N
Sbjct: 270 PRACRRLIALGADINAV 286
Score = 77.0 bits (190), Expect = 9e-15
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 42/225 (18%)
Query: 66 DNKIREVEFLLSTGDHDVNEKLQDGRTAL--YMAILQGLYKMVTLLIHHGANVNDRDEKG 123
+ ++ L+ G DVN K + GRT L Y++ K++ LL+ GA+VN D G
Sbjct: 94 ATTLDVIKLLIKAG-ADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYG 152
Query: 124 YTPLHLACYLGNKN----IVKFLLSKKADVRAK--------------------------- 152
TPL L ++N +++ L+ ADV A
Sbjct: 153 MTPLA--VLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIR 210
Query: 153 --CSMMVTPILAVSA--NMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
C T +L + +M+ S+ ++ L+ G ++ + + +PLH+A V N
Sbjct: 211 AGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRY-GQTPLHYAAVFNN 269
Query: 209 LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
LI AD N + PL + +N+ + V A L
Sbjct: 270 PRACRRLIALGADINAVSSDGNTPLS-LMVRNNNGRAVRAALAKN 313
Score = 74.3 bits (183), Expect = 8e-14
Identities = 76/276 (27%), Positives = 120/276 (43%), Gaps = 29/276 (10%)
Query: 66 DNKIREVEFLLSTGDHDVNEKLQDGRTAL--YMAILQGLYK-MVTLLIHHGANVNDRDEK 122
+ + EV LL+ G DVN + + G+T L Y+ K +V LL+ GA+VN +
Sbjct: 24 NVTVEEVRRLLAAGA-DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERC 82
Query: 123 GYTPLHLACYLGNKN---IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
G+TPLH YL N ++K L+ ADV AK + TP+ +S + + +I
Sbjct: 83 GFTPLH--LYLYNATTLDVIKLLIKAGADVNAKDKVGRTPL---HVYLSGFNINPK-VIR 136
Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSV--VELLIKCKADTNLIVKVNQEPLLFFA 237
+L+ GA+V + +PL + +N +V + LLI AD + + L
Sbjct: 137 LLLRKGADVNALDLY-GMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHL 195
Query: 238 IESNSVK----IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQ--IVQMLVKRKFDIN 291
S K IV L D + +D N+ LH + + +V L+ IN
Sbjct: 196 ---QSFKPRARIVRE-LIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISIN 251
Query: 292 AQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ-DSINV 326
A+NRY P+ +A + L+ IN
Sbjct: 252 ARNRYGQTPLHYAAVFN--NPRACRRLIALGADINA 285
Score = 62.7 bits (153), Expect = 3e-10
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 520 LDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIY---VAWKGYEEIVDLLLDNGAD 576
D+L N + +EV++ + GA VN E + L + + ++IV LLL+ GAD
Sbjct: 16 YDYLLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD 75
Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPL 623
VN GFT LH+ + ++++ L+ GA + KD K G+TPL
Sbjct: 76 VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD-KVGRTPL 121
Score = 55.4 bits (134), Expect = 6e-08
Identities = 62/326 (19%), Positives = 117/326 (35%), Gaps = 61/326 (18%)
Query: 360 IIKRIIDRTENINAEGDDMITPL---LFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
++R++ ++N G+ TPL L + + L++ GA+VN E
Sbjct: 29 EVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER------- 81
Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTS---NKPKQKPLAVAIQSGDFQ 473
C + L + ++++KLL+ GADVN P L+ + + +
Sbjct: 82 ------CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSG--FNINPK 133
Query: 474 IVKELQNYGAQI-DKENYLKNKEAARIAHSTTELEERKKIN-DLLKLNLD---------- 521
+++ L GA + + Y A + + + N +LL+L +D
Sbjct: 134 VIRLLLRKGADVNALDLYGMTPLAVLL--------KSRNANVELLRLLIDAGADVYAVDD 185
Query: 522 --------FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEE--IVDLLL 571
L++ + V++ I G + + L +A + +V LL
Sbjct: 186 RFRSLLHHHLQSFKPRA-RIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLL 244
Query: 572 DNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKN 631
G +N ++ G T LH A F +N R+L+ GA + G TPL N
Sbjct: 245 IAGISINARNRYGQTPLHYAAVF-NNPRACRRLIALGADINAVS-SDGNTPLSLMVRNNN 302
Query: 632 RDIIDL-------LHLIDNLFASVTN 650
+ + + +
Sbjct: 303 GRAVRAALAKNPSAETVAATLNTASV 328
Score = 29.6 bits (67), Expect = 6.5
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
+N + + G+T L+ A + + LI GA++N G TPL L N V+
Sbjct: 249 SINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRA 308
Query: 142 LLSKKADVRA 151
L+K
Sbjct: 309 ALAKNPSAET 318
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional.
Length = 422
Score = 77.0 bits (190), Expect = 8e-15
Identities = 73/258 (28%), Positives = 111/258 (43%), Gaps = 29/258 (11%)
Query: 358 DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDA 417
+ IK II + + + PL A + ++ K L+ GA++N
Sbjct: 15 VKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADIN------------ 62
Query: 418 RSSDFCFRSALQYACKHKNNI----EMVKLLLLHGADVNDTSNKPKQKPLAVAIQ--SGD 471
SS + L Y K N+ E+VKLLL +GA+VN N PL AI S
Sbjct: 63 -SSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNN-GITPLLYAISKKSNS 120
Query: 472 FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKY 531
+ IV+ L + GA + +KN + + H E + +LKL +D K V N
Sbjct: 121 YSIVEYLLDNGANV----NIKNSDGENLLHLYLESNKIDL--KILKLLID--KGVDINAK 172
Query: 532 DEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
+ V + G +N+ + L Y + E V LLD GA+ N + G T LH+A
Sbjct: 173 NRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIA 232
Query: 592 CRFHSNDNIVRKLLHHGA 609
+ N I + LL++G
Sbjct: 233 ILNN-NKEIFKLLLNNGP 249
Score = 75.9 bits (187), Expect = 2e-14
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 63 AVWDNKIREVEFLLSTGDHDVNEKLQDGRTAL-----YMAILQGLYKMVTLLIHHGANVN 117
A I V+ LL G D+N ++ T L L + ++V LL+ +GANVN
Sbjct: 42 AKEARNIDVVKILLDNG-ADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVN 100
Query: 118 DRDEKGYTPLHLACY--LGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDT 174
D G TPL A + +IV++LL A+V K S + L + +N
Sbjct: 101 APDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESN-----KID 155
Query: 175 NEIISMLIENGANVREK------------MPFTD---FSPLHFAVVKKNLSVVELLIKCK 219
+I+ +LI+ G ++ K + D F+PLH+AV N V+ L+
Sbjct: 156 LKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG 215
Query: 220 ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
A+ NL+ K P L AI +N+ +I + LN+
Sbjct: 216 ANPNLVNKYGDTP-LHIAILNNNKEIFKLLLNNG 248
Score = 70.8 bits (174), Expect = 7e-13
Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 47/322 (14%)
Query: 94 LYMAILQGLYKMVTLLIHHGANVND-----RDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
LY I+ +++ + + D +K PL+LA N ++VK LL AD
Sbjct: 1 LYSYIVLTKSRIIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD 60
Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK- 207
+ + TP+ +S + TD EI+ +L+E GANV +PL +A+ KK
Sbjct: 61 INSSTKNNSTPLHYLSNIKY-NLTDVKEIVKLLLEYGANVNAPDNNG-ITPLLYAISKKS 118
Query: 208 -NLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSV--KIVEAFLN------------- 251
+ S+VE L+ A+ N I + E LL +ESN + KI++ ++
Sbjct: 119 NSYSIVEYLLDNGANVN-IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNY 177
Query: 252 --SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGR 309
S ++I D + LH A + N + V+ L+ + N N+Y P+ AI
Sbjct: 178 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNN 237
Query: 310 KHT------------HVAEYLLQQ-----DSINVNLPIKR---PNLLLDTVMSLKDPKVM 349
K + E LL ++I +K+ LLD +
Sbjct: 238 KEIFKLLLNNGPSIKTIIETLLYFKDKDLNTITKIKMLKKSIMYMFLLDPGFYKNRKLIE 297
Query: 350 SQTQIKRLDQIIKRIIDRTENI 371
+ +K + ++ I+R + I
Sbjct: 298 NSKSLKDVINECEKEIERMKEI 319
Score = 67.4 bits (165), Expect = 8e-12
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 50/313 (15%)
Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVG-----NLQIVQMLVKRKF 288
L+ A E+ ++ +V+ L+ D++ S + ++ LH ++ +IV++L++
Sbjct: 39 LYLAKEARNIDVVKILLD-NGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGA 97
Query: 289 DINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKV 348
++NA + + P+ +AI + EYLL NVN+ LL + +
Sbjct: 98 NVNAPDNNGITPLLYAISKKSNSYSIVEYLLDN-GANVNIKNSDGENLLHLYLESNKIDL 156
Query: 349 MSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTE 408
+I+K +ID+ +INA+ YL+ G +N+
Sbjct: 157 ----------KILKLLIDKGVDINAK-----------------NRVNYLLSYGVPINIK- 188
Query: 409 TQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQ 468
D + L YA + NN E VK LL GA+ N + PL +AI
Sbjct: 189 ------------DVYGFTPLHYAVYN-NNPEFVKYLLDLGANPNLVNKYGD-TPLHIAIL 234
Query: 469 SGDFQIVKELQNYGAQIDK-ENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVR 527
+ + +I K L N G I L + + T +K I + L+ F KN +
Sbjct: 235 NNNKEIFKLLLNNGPSIKTIIETLLYFKDKDLNTITKIKMLKKSIMYMFLLDPGFYKNRK 294
Query: 528 SNKYDEVKKNIED 540
+ + K++ +
Sbjct: 295 LIENSKSLKDVIN 307
Score = 55.4 bits (134), Expect = 5e-08
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 25/140 (17%)
Query: 67 NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY--KMVTLLIHHGANVN------- 117
N VE+LL G +VN K DG L++ + K++ LLI G ++N
Sbjct: 119 NSYSIVEYLLDNGA-NVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNY 177
Query: 118 ---------DRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMS 168
+D G+TPLH A Y N VK+LL A+ TP+ N +
Sbjct: 178 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNN 237
Query: 169 EDSTDTNEIISMLIENGANV 188
+ EI +L+ NG ++
Sbjct: 238 K------EIFKLLLNNGPSI 251
Score = 54.3 bits (131), Expect = 1e-07
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 67 NKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTP 126
N V +LLS G +N K G T L+ A+ + V L+ GAN N ++ G TP
Sbjct: 170 NAKNRVNYLLSYG-VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTP 228
Query: 127 LHLACYLGNKNIVKFLLSKKADVRAKCS 154
LH+A NK I K LL+ ++
Sbjct: 229 LHIAILNNNKEIFKLLLNNGPSIKTIIE 256
Score = 53.1 bits (128), Expect = 3e-07
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 52/242 (21%)
Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKH-----CDLQSAKYLIQKGANVNLTETQKAFI 414
++K ++D +IN+ + TPL + + + K L++ GANVN
Sbjct: 50 VVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAP------- 102
Query: 415 SDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG--DF 472
+ L K N+ +V+ LL +GA+VN ++ + L + ++S D
Sbjct: 103 -----DNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGEN-LLHLYLESNKIDL 156
Query: 473 QIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD----------- 521
+I+K L + G I+ +N ++N LL +
Sbjct: 157 KILKLLIDKGVDINAKN---------------------RVNYLLSYGVPINIKDVYGFTP 195
Query: 522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS 581
V +N + VK ++ GA N+ ++ + L +EI LLL+NG +
Sbjct: 196 LHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTII 255
Query: 582 AT 583
T
Sbjct: 256 ET 257
Score = 49.3 bits (118), Expect = 5e-06
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 538 IEDGACVNVSSERRGSALIYVAWK--GYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
+E GA VN + L+Y K IV+ LLDNGA+VN K++ G LH+ +
Sbjct: 93 LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESN 152
Query: 596 SND-NIVRKLLHHGAYYDMKD 615
D I++ L+ G + K+
Sbjct: 153 KIDLKILKLLIDKGVDINAKN 173
>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional.
Length = 434
Score = 71.9 bits (176), Expect = 3e-13
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 30/267 (11%)
Query: 64 VWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKG 123
++ I +E ++ + +N + + T L AI G K+V L I HGA++N + K
Sbjct: 9 IYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKI 68
Query: 124 YTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE 183
PL A +G +I+K L+ D S++ P + ++I +++
Sbjct: 69 PHPLLTAIKIGAHDIIKLLIDNGVDT----SILPIPCI------------EKDMIKTILD 112
Query: 184 NGANV----REKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIE 239
G +V E F LH+A+ K +L +++L + AD N I N + AI+
Sbjct: 113 CGIDVNIKDAELKTF-----LHYAIKKGDLESIKMLFEYGADVN-IEDDNGCYPIHIAIK 166
Query: 240 SNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLP 299
N I++ L + ++ D + S LH A G+ +++L+ I + +
Sbjct: 167 HNFFDIIKLLLEKGAY-ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFT 225
Query: 300 PMFFAIGMGRKHTHVAEYLLQQDSINV 326
P+ AI R E L+ SIN
Sbjct: 226 PLHNAIIHNRS---AIELLINNASIND 249
Score = 69.2 bits (169), Expect = 3e-12
Identities = 79/302 (26%), Positives = 125/302 (41%), Gaps = 57/302 (18%)
Query: 355 KRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQ---- 410
++ I K I ++ IN D+ TPL+ A + D + + I+ GA++N T+
Sbjct: 12 GDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHP 71
Query: 411 -------------KAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK 457
K I + + S L C K +M+K +L G DVN +
Sbjct: 72 LLTAIKIGAHDIIKLLIDNGVDT-----SILPIPCIEK---DMIKTILDCGIDVN-IKDA 122
Query: 458 PKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLK 517
+ L AI+ GD + +K L YGA ++ E+ N
Sbjct: 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIED----------------------DNGCYP 160
Query: 518 LNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADV 577
+++ ++ N +D +K +E GA NV S L A G + LL+D+G +
Sbjct: 161 IHI----AIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI 216
Query: 578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA-EAGKNRDIID 636
K GFT LH A + + +LL + A + +D G TPL HA + DIID
Sbjct: 217 MNKCKNGFTPLHNAIIHNRS---AIELLINNASINDQD-IDGSTPLHHAINPPCDIDIID 272
Query: 637 LL 638
+L
Sbjct: 273 IL 274
Score = 63.1 bits (153), Expect = 2e-10
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 432 CKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYL 491
C + +IE ++ ++ + + + S PL AI+SGD +IV+ +GA I+ N
Sbjct: 8 CIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHIN-- 65
Query: 492 KNKEAARIAHS-TTELEERKKINDLLKLNLD-----FLKNVRSNKYDEVKKNIEDGACVN 545
+I H T ++ +D++KL +D + + + D +K ++ G VN
Sbjct: 66 -----TKIPHPLLTAIKIGA--HDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVN 118
Query: 546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
+ + L Y KG E + +L + GADVN + G +H+A + + D I++ LL
Sbjct: 119 IKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFD-IIKLLL 177
Query: 606 HHGAYYDMKDGKTGKTPLKHA 626
GAY ++KD G++PL +A
Sbjct: 178 EKGAYANVKD-NNGESPLHNA 197
Score = 60.7 bits (147), Expect = 1e-09
Identities = 55/180 (30%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
DVN K + +T L+ AI +G + + +L +GA+VN D+ G P+H+A +I+K
Sbjct: 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKL 175
Query: 142 LLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLH 201
LL K A K + +P L +A + + I +LI++G ++ K F+PLH
Sbjct: 176 LLEKGAYANVKDNNGESP-LHNAAEYGDYAC-----IKLLIDHGNHIMNKCK-NGFTPLH 228
Query: 202 FAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISD 261
A++ N S +ELLI A N ++ L AI + L D+SI D
Sbjct: 229 NAII-HNRSAIELLIN-NASIN-DQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKD 285
Score = 59.6 bits (144), Expect = 3e-09
Identities = 91/404 (22%), Positives = 163/404 (40%), Gaps = 71/404 (17%)
Query: 238 IESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF 297
I S ++ +E + +K ++IS + + L A G+ +IV++ +K DIN N
Sbjct: 9 IYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKI 68
Query: 298 LPPMFFAIGMGRKHTHVAEYLLQQDSINVN-LPIKRPNLLLDTVMSLKDPKVMSQTQIKR 356
P+ AI +G H LL + ++ + LPI P + D
Sbjct: 69 PHPLLTAIKIG---AHDIIKLLIDNGVDTSILPI--PCIEKDM----------------- 106
Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
IK I+D ++N + ++ T L +A K DL+S K L + GA+VN+ + +
Sbjct: 107 ----IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCY--- 159
Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
+ A KH N +++KLLL GA N + + PL A + GD+ +K
Sbjct: 160 ----------PIHIAIKH-NFFDIIKLLLEKGAYAN-VKDNNGESPLHNAAEYGDYACIK 207
Query: 477 ELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKK 536
L ID N++ NK + + +LL N
Sbjct: 208 LL------IDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINN----------------- 244
Query: 537 NIEDGACVNVSSERRGSALIY-VAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
A +N + L + + +I+D+LL + AD++ K G + A ++
Sbjct: 245 -----ASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYI 299
Query: 596 SNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLH 639
+ D +++ ++ + D L+H E N++ D +
Sbjct: 300 NKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIKDNKEFSDFIK 343
Score = 58.1 bits (140), Expect = 7e-09
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 47 INSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV 106
+N A+ T L A+ + ++ L G DVN + +G +++AI + ++
Sbjct: 117 VNIKDAELK--TFLHYAIKKGDLESIKMLFEYG-ADVNIEDDNGCYPIHIAIKHNFFDII 173
Query: 107 TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSA 165
LL+ GA N +D G +PLH A G+ +K L+ + KC TP+ A+
Sbjct: 174 KLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIH 233
Query: 166 NMSEDSTDTNEIISMLIENGA-NVREKMPFTDFSPLHFAVVKK-NLSVVELLIKCKADTN 223
N S I +LI N + N ++ +PLH A+ ++ ++++L+ KAD +
Sbjct: 234 NRS--------AIELLINNASINDQD---IDGSTPLHHAINPPCDIDIIDILLYHKADIS 282
Query: 224 L 224
+
Sbjct: 283 I 283
>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional.
Length = 477
Score = 67.6 bits (165), Expect = 1e-11
Identities = 70/279 (25%), Positives = 115/279 (41%), Gaps = 38/279 (13%)
Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
++K ++ R N+N +TPL K + K +I+ ++ T A I DA +
Sbjct: 52 VVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVA-IKDAFN 110
Query: 420 SD--FCFRSALQYACKHKNNI----------------EMVKLLLLHGADVNDTSNKPKQK 461
+ F+ L K+ I E+ KLLL +GAD+N
Sbjct: 111 NRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNT 170
Query: 462 PLAVAIQSGDFQIVKELQNYGAQI---DKENYLKNKEAAR-----IAHSTTELEERKKIN 513
L A ++ D ++ + L +YGA + DK N A + I H E
Sbjct: 171 ALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDAR 230
Query: 514 DL-----LKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVD 568
D L +++ + K+ YD +K +E G VN S G ++ + K E +
Sbjct: 231 DKCGNTPLHISVGYCKD-----YDILKLLLEHGVDVNAKSYILGLTALHSSIKS-ERKLK 284
Query: 569 LLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
LLL+ GAD+N ++ T L A + + NI R L+ +
Sbjct: 285 LLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISN 323
Score = 67.2 bits (164), Expect = 1e-11
Identities = 62/254 (24%), Positives = 107/254 (42%), Gaps = 41/254 (16%)
Query: 105 MVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVT------ 158
+V L+ G NVN D + TPLH+ C NK +K ++ KCS+ T
Sbjct: 52 VVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSIN----KCSVFYTLVAIKD 107
Query: 159 ------------------------PILAVSANMSEDSTDTNEIISMLIENGANVREKMPF 194
++ + +D + EI +L+ GA++ K
Sbjct: 108 AFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEA-EITKLLLSYGADINMKDRH 166
Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL-NSK 253
+ LH+A K+ + ELL+ A+ N+ K N P L A++ + IV L N
Sbjct: 167 KGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSP-LHHAVKHYNKPIVHILLENGA 225
Query: 254 NFDVSISDGDLNSLLHKAC-HVGNLQIVQMLVKRKFDINAQNRYF-LPPMFFAIGMGRKH 311
+ D G N+ LH + + + I+++L++ D+NA++ L + +I RK
Sbjct: 226 STDARDKCG--NTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKSERKL 283
Query: 312 THVAEYLLQQDSIN 325
+ EY +S+N
Sbjct: 284 KLLLEYGADINSLN 297
Score = 52.6 bits (126), Expect = 4e-07
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEA 496
N+++VK LL G +VN ++ PL + + + +KE+ I+K + A
Sbjct: 49 NLDVVKSLLTRGHNVNQPDHR-DLTPLHIICKEPNKLGMKEMI---RSINKCSVFYTLVA 104
Query: 497 ARIAHSTTELEERKKI-NDLLKLNLDF-LKNVRSNKYDE------VKKNIEDGACVNVSS 548
+ A + +E K I + K L + D+ K + GA +N+
Sbjct: 105 IKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKD 164
Query: 549 ERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
+G +AL Y + + +LLL GA+VN T + LH A + H N IV LL +
Sbjct: 165 RHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVK-HYNKPIVHILLEN 223
Query: 608 GAYYDMKDGKTGKTPLKHAEAG--KNRDIIDLL 638
GA D +D K G TPL H G K+ DI+ LL
Sbjct: 224 GASTDARD-KCGNTPL-HISVGYCKDYDILKLL 254
Score = 48.7 bits (116), Expect = 7e-06
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 41/263 (15%)
Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA------IGMG-------RKHTHV 314
LH+A NL +V+ L+ R ++N + L P+ +GM +
Sbjct: 41 LHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFY 100
Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLD----QIIKRIIDRTEN 370
++ N N+ I + +L + +++ ++ + + D +I K ++ +
Sbjct: 101 TLVAIKDAFNNRNVEIFK-IILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGAD 159
Query: 371 INAEGDDMI-TPLLFAAKHCDLQSAKYLIQKGANVNLTETQ-----------------KA 412
IN + T L +A ++ D + + L+ GANVN+ +
Sbjct: 160 INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHI 219
Query: 413 FISDARSSDF---CFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQS 469
+ + S+D C + L + + + +++KLLL HG DVN S L +I+S
Sbjct: 220 LLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKS 279
Query: 470 GDFQIVKELQNYGAQIDKENYLK 492
+ +K L YGA I+ N K
Sbjct: 280 E--RKLKLLLEYGADINSLNSYK 300
>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional.
Length = 413
Score = 65.4 bits (159), Expect = 4e-11
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
L AV + ++ VE LL G + +DG T L++A + ++ LLI GA+ +
Sbjct: 72 LHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIP 131
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
+ ++PLHLA +G+ ++ L+ KA + + TP++ M++ I
Sbjct: 132 NTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIA---MAKGDI---AICK 185
Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQE 231
ML+++GAN+ + L +A+ + +V L IK AD N++ + E
Sbjct: 186 MLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGE 237
Score = 62.7 bits (152), Expect = 3e-10
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 31 IMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDG 90
I+F E D L IN + ++ + A+ ++ L+ G + K D
Sbjct: 10 ILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP-DVKYPDI 68
Query: 91 RTALYMAILQGLYKMVTLLIHHGANVNDR-DEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
+ L+ A+ +G K V L+ G +D + G TPLHLA L +I+K L+++ AD
Sbjct: 69 ESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP 128
Query: 150 RAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENGA--NVREKMPFTDFSPLHFAVVK 206
+ +P+ LAV M D + I +LI++ A ++ + T PL A+ K
Sbjct: 129 DIPNTDKFSPLHLAV---MMGDI----KGIELLIDHKACLDIEDCCGCT---PLIIAMAK 178
Query: 207 KNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL 250
++++ ++L+ A+ + K L +AIE+N + IV F+
Sbjct: 179 GDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFI 222
Score = 50.4 bits (120), Expect = 2e-06
Identities = 48/249 (19%), Positives = 94/249 (37%), Gaps = 48/249 (19%)
Query: 91 RTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR 150
+ AL AIL G + L+ G N N G +P+ LA + +K L+ A
Sbjct: 3 QVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD 62
Query: 151 AKCSMMVTPILAVSANMSEDSTDTNEI--ISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
K + + + D+ + ++ + L++ G + +PLH A + K
Sbjct: 63 VKYPDIESEL--------HDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKK 114
Query: 209 LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLL 268
L +++LLI AD + I + D S L
Sbjct: 115 LDIMKLLIARGADPD-----------------------------------IPNTDKFSPL 139
Query: 269 HKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
H A +G+++ +++L+ K ++ ++ P+ A M + + + LL + N++
Sbjct: 140 HLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIA--MAKGDIAICKMLLDSGA-NIDY 196
Query: 329 PIKRPNLLL 337
K +
Sbjct: 197 FGKNGCVAA 205
Score = 50.0 bits (119), Expect = 3e-06
Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 69/287 (24%)
Query: 170 DSTDTNE--IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
D+ E I L++ G N ++ + SP+ A+ ++ ++LL+K A ++
Sbjct: 8 DAILFGELDIARRLLDIGINPNFEI-YDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYP 66
Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNF--DVSISDGDLNSLLHKACHVGNLQIVQMLVK 285
+ L A+E VK VE L+ F DV DG + LH A + L I+++L+
Sbjct: 67 DIESEL-HDAVEEGDVKAVEELLDLGKFADDVFYKDG--MTPLHLATILKKLDIMKLLIA 123
Query: 286 RKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKD 345
R D + N P+ A+ MG ++
Sbjct: 124 RGADPDIPNTDKFSPLHLAVMMG----------------DIKG----------------- 150
Query: 346 PKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVN 405
I+ +ID ++ E TPL+ A D+ K L+ GAN++
Sbjct: 151 ---------------IELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANID 195
Query: 406 LTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN 452
++ +AL YA ++ N I++V+L + GAD N
Sbjct: 196 YF---------GKNGCV---AALCYAIEN-NKIDIVRLFIKRGADCN 229
Score = 48.4 bits (115), Expect = 8e-06
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 40/250 (16%)
Query: 360 IIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARS 419
I +R++D N N E D I+P+ A K D ++ K L++ GA I D +
Sbjct: 17 IARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGA-----------IPDVKY 65
Query: 420 SDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQ 479
D S L A + + +++ V+ LL G +D K PL +A I+K L
Sbjct: 66 PD--IESELHDAVE-EGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLI 122
Query: 480 NYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIE 539
GA D + N + H + + K I L+ + +IE
Sbjct: 123 ARGADPD----IPNTDKFSPLHLAVMMGDIKGIELLID--------------HKACLDIE 164
Query: 540 DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN 599
D + LI KG I +LLD+GA++++ G A ++ +
Sbjct: 165 DCCGC--------TPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKID 216
Query: 600 IVRKLLHHGA 609
IVR + GA
Sbjct: 217 IVRLFIKRGA 226
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies).
Length = 54
Score = 56.1 bits (136), Expect = 2e-10
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 90 GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
GRTAL+ A + G ++V L+ G ++N DE G T LH+A GN ++K LL
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 47.2 bits (113), Expect = 3e-07
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 265 NSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLL 319
+ LHKA G L++V+ L+++ DIN + + A G + V + LL
Sbjct: 2 RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENG--NLEVLKLLL 54
Score = 43.4 bits (103), Expect = 8e-06
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 14/66 (21%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
T L AA L+ KYL++KG ++N T D +AL A ++ N+E
Sbjct: 3 TALHKAAISGRLELVKYLLEKGVDINRT-------------DEDGNTALHIAAEN-GNLE 48
Query: 440 MVKLLL 445
++KLLL
Sbjct: 49 VLKLLL 54
Score = 41.5 bits (98), Expect = 4e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
+AL A G E+V LL+ G D+N G TALH+A + N +++ LL
Sbjct: 3 TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAE-NGNLEVLKLLL 54
Score = 39.9 bits (94), Expect = 1e-04
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 233 LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV 284
L A S +++V+ L D++ +D D N+ LH A GNL+++++L+
Sbjct: 4 ALHKAAISGRLELVKYLLEKG-VDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 39.9 bits (94), Expect = 1e-04
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
R+AL A +E+VK LL G D+N T ++ L +A ++G+ +++K L
Sbjct: 2 RTALHKAAIS-GRLELVKYLLEKGVDINRT-DEDGNTALHIAAENGNLEVLKLL 53
Score = 38.0 bits (89), Expect = 5e-04
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 56 ELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLI 110
T L A ++ V++LL G D+N +DG TAL++A G +++ LL+
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKG-VDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 33.8 bits (78), Expect = 0.018
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Query: 123 GYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI-LAVSANMSEDSTDTNEIISML 181
G T LH A G +VK+LL K D+ T + +A E++ +L
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNL-------EVLKLL 53
Query: 182 I 182
+
Sbjct: 54 L 54
Score = 33.8 bits (78), Expect = 0.019
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLL 571
S + + VK +E G +N + E +AL A G E++ LLL
Sbjct: 9 AISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 33.8 bits (78), Expect = 0.019
Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 198 SPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL 250
+ LH A + L +V+ L++ D N + + L A E+ ++++++ L
Sbjct: 3 TALHKAAISGRLELVKYLLEKGVDINRTDE-DGNTALHIAAENGNLEVLKLLL 54
Score = 31.4 bits (72), Expect = 0.11
Identities = 11/40 (27%), Positives = 25/40 (62%)
Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLI 398
+++K ++++ +IN +D T L AA++ +L+ K L+
Sbjct: 15 ELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction
only].
Length = 235
Score = 56.0 bits (134), Expect = 1e-08
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 7/156 (4%)
Query: 489 NYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSS 548
N L+ + L L L+ ++ + + K I D +
Sbjct: 12 NKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDR-HLAARD 70
Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN----IVRKL 604
L A KG ++IV LLL +GADVN K A G T LH+A + + + L
Sbjct: 71 LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLL 130
Query: 605 LHHGAYYDMKD--GKTGKTPLKHAEAGKNRDIIDLL 638
L GA D+ + + G TPL A + DI++LL
Sbjct: 131 LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELL 166
Score = 51.4 bits (122), Expect = 4e-07
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 84 NEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKN-----I 138
+ DGR L+ A +G K+V LL+ GA+VN +D G TPLHLA GN +
Sbjct: 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEV 126
Query: 139 VKFLLSKKADVRAKC---SMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFT 195
K LL AD+ TP+ + N +I+ +L+E GA+ + +
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALN------GDADIVELLLEAGADPNSRNSY- 179
Query: 196 DFSPLHFAVVKKNLSVVELLIK 217
+ L A + +V+LL+
Sbjct: 180 GVTALDPAAKNGRIELVKLLLD 201
Score = 51.0 bits (121), Expect = 6e-07
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 72 VEFLLSTGDH--DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHL 129
+ LL G N + +DG T L+ A L G +V LL+ GA+ N R+ G T L
Sbjct: 127 AKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDP 186
Query: 130 ACYLGNKNIVKFLLSKK 146
A G +VK LL K
Sbjct: 187 AAKNGRIELVKLLLDKG 203
Score = 40.6 bits (94), Expect = 0.001
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 531 YDEVKKNIEDGAC---VNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTA 587
+ K +E GA N+ E + L + A G +IV+LLL+ GAD N +++ G TA
Sbjct: 124 IEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTA 183
Query: 588 LHMACRFHSNDNIVRKLLHHGAYYD 612
L A + +V+ LL G +
Sbjct: 184 LDPAAKN-GRIELVKLLLDKGLHLS 207
Score = 38.3 bits (88), Expect = 0.008
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 195 TDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK----IVEAFL 250
PLH A K + +V+LL+ AD N PL A+ N + + + L
Sbjct: 72 DGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLL 131
Query: 251 --NSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMG 308
+ ++ D D N+ LH A G+ IV++L++ D N++N Y + + A G
Sbjct: 132 EAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNG 191
Query: 309 RK 310
R
Sbjct: 192 RI 193
Score = 37.5 bits (86), Expect = 0.015
Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 32/201 (15%)
Query: 310 KHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTE 369
+ + L + + L + ++ + ++K I+DR
Sbjct: 7 ALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDR-- 64
Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNL----------------------T 407
++ A D PL AA D + K L+ GA+VN
Sbjct: 65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNI 124
Query: 408 ETQKAFISDARSSDFCFR------SALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQK 461
E K + D + L +A + + ++V+LLL GAD N + N
Sbjct: 125 EVAKLLLEAGADLDVNNLRDEDGNTPLHWAALN-GDADIVELLLEAGADPN-SRNSYGVT 182
Query: 462 PLAVAIQSGDFQIVKELQNYG 482
L A ++G ++VK L + G
Sbjct: 183 ALDPAAKNGRIELVKLLLDKG 203
Score = 34.4 bits (78), Expect = 0.15
Identities = 48/229 (20%), Positives = 80/229 (34%), Gaps = 56/229 (24%)
Query: 222 TNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL--LHKACHVGNLQI 279
+L +++ L+ + + L D ++ DL+ LH A G+ +I
Sbjct: 29 LDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKI 88
Query: 280 VQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDT 339
V++L+ D+NA++ P+ A G E LLL+
Sbjct: 89 VKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVA---------------KLLLEA 133
Query: 340 VMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQ 399
+ N +D TPL +AA + D + L++
Sbjct: 134 G-------------------------ADLDVNNLRDEDGNTPLHWAALNGDADIVELLLE 168
Query: 400 KGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG 448
GA+ N S + +AL A K+ IE+VKLLL G
Sbjct: 169 AGADPN-------------SRNSYGVTALDPAAKN-GRIELVKLLLDKG 203
Score = 32.1 bits (72), Expect = 0.78
Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 11/156 (7%)
Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
+ S+ ELL+K D +L + L + S + L + DV+ D D
Sbjct: 47 LLPAASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADG 106
Query: 265 NSLLHKACHVGNLQ-----IVQMLVKRK---FDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
++ LH A GN + ++L++ N ++ P+ +A G + E
Sbjct: 107 DTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNG--DADIVE 164
Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQT 352
LL+ + + N LD +++
Sbjct: 165 LLLEAGA-DPNSRNSYGVTALDPAAKNGRIELVKLL 199
>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional.
Length = 446
Score = 55.4 bits (133), Expect = 6e-08
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 8/204 (3%)
Query: 104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAV 163
+ V L+H G + N+ D+ G PLH+A + N IV LL+ AD A TP+ +
Sbjct: 53 RFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYL 112
Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
S E E I++L++ GA + + PL A + V + ++ +
Sbjct: 113 SGTDDE----VIERINLLVQYGAKINNSVDEEGCGPL-LACTDPSERVFKKIMSIGFEAR 167
Query: 224 LIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACH--VGNLQIVQ 281
++ K + + + N +++ S D D N+ LH C V N+ I+
Sbjct: 168 IVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIIN 227
Query: 282 MLVKRKFDINAQNRYFLPPMFFAI 305
+L+ D+N QN++ P+ I
Sbjct: 228 LLLPST-DVNKQNKFGDSPLTLLI 250
Score = 36.6 bits (84), Expect = 0.044
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 557 YVAWKGYEE-IVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
Y KG +E V+ LL G N G LH+A + +N+ IV LL HGA + D
Sbjct: 44 YCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKI-NNNRIVAMLLTHGADPNACD 102
Query: 616 GKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYD 653
K KTPL + +G + ++I+ ++L+ A + N D
Sbjct: 103 -KQHKTPLYYL-SGTDDEVIERINLLVQYGAKINNSVD 138
Score = 30.4 bits (68), Expect = 3.5
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 244 KIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFF 303
+ VE L+ + + + +D D N LH A + N +IV ML+ D NA ++ P+++
Sbjct: 53 RFVEELLH-RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYY 111
Query: 304 AIG 306
G
Sbjct: 112 LSG 114
>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies).
Length = 56
Score = 48.1 bits (115), Expect = 2e-07
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 108 LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI 160
LL H ++N D G TPLHLA G +V++LL D+ + S +T +
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTAL 53
Score = 47.7 bits (114), Expect = 2e-07
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 75 LLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
LL G D+N +G T L++A G ++V L+ G ++N RD G T L LA
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 40.0 bits (94), Expect = 1e-04
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 570 LLDNG-ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
LL++G D+N G T LH+A ++ + + +V+ LL G +++D G T L A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALE-LVQWLLKPGVDLNLRD-SDGLTALDLA 56
Score = 36.9 bits (86), Expect = 0.001
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 256 DVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
D++ +DG+ N+ LH A G L++VQ L+K D+N ++
Sbjct: 8 DLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSD 48
Score = 35.8 bits (83), Expect = 0.004
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 538 IEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
+E G +++ G + L A G E+V LL G D+N + + G TAL +A
Sbjct: 2 LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 33.1 bits (76), Expect = 0.032
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 444 LLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
LL HG + ++ PL +A + G ++V+ L G ++ +
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRD 46
Score = 31.2 bits (71), Expect = 0.17
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 181 LIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL 224
L+E+G +PLH A L +V+ L+K D NL
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNL 44
Score = 29.2 bits (66), Expect = 0.89
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 411 KAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVN 452
+ D ++D + L A K +E+V+ LL G D+N
Sbjct: 3 EHGPIDLNATDGNGNTPLHLAAK-YGALELVQWLLKPGVDLN 43
Score = 28.5 bits (64), Expect = 1.5
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQ 410
++NA + TPL AAK+ L+ ++L++ G ++NL ++
Sbjct: 7 IDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSD 48
>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities. Repeats 13-24 are especially active,
with known sites of interaction for the Na/K ATPase,
Cl/HCO(3) anion exchanger, voltage-gated sodium channel,
clathrin heavy chain and L1 family cell adhesion
molecules. The ANK repeats are found to form a
contiguous spiral stack such that ion transporters like
the anion exchanger associate in a large central cavity
formed by the ANK repeat spiral, while clathrin and cell
adhesion molecules associate with specific regions
outside this cavity.
Length = 33
Score = 45.6 bits (109), Expect = 6e-07
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 122 KGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
G TPLHLA G+ +VK LL ADV A+
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNAR 31
Score = 42.2 bits (100), Expect = 1e-05
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 89 DGRTALYMAILQGLYKMVTLLIHHGANVNDRDE 121
DG T L++A G ++V LL+ GA+VN RD+
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVNDTSN 456
+ L A ++ ++E+VKLLL GADVN
Sbjct: 3 NTPLHLAARN-GHLEVVKLLLEAGADVNARDK 33
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
D N+ LH A G+L++V++L++ D+NA+++
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 35.6 bits (83), Expect = 0.002
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLT 407
TPL AA++ L+ K L++ GA+VN
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAR 31
Score = 35.2 bits (82), Expect = 0.003
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFK 580
+ L A G+ E+V LLL+ GADVN +
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAGADVNAR 31
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNL 224
+PLH A +L VV+LL++ AD N
Sbjct: 3 NTPLHLAARNGHLEVVKLLLEAGADVNA 30
Score = 34.8 bits (81), Expect = 0.004
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 584 GFTALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
G T LH+A R + + +V+ LL GA + +D
Sbjct: 2 GNTPLHLAAR-NGHLEVVKLLLEAGADVNARD 32
Score = 28.7 bits (65), Expect = 0.72
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKEN 489
PL +A ++G ++VK L GA ++ +
Sbjct: 5 PLHLAARNGHLEVVKLLLEAGADVNARD 32
>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional.
Length = 494
Score = 49.0 bits (117), Expect = 6e-06
Identities = 82/352 (23%), Positives = 154/352 (43%), Gaps = 69/352 (19%)
Query: 104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNK----NIVKFLLSKKADVRAKCSMMVTP 159
+ L+ G +VN+ + +G + L L YL K IVK L+ ADV K + TP
Sbjct: 17 NALEFLLRTGFDVNE-EYRGNSILLL--YLKRKDVKIKIVKLLIDNGADVNYK-GYIETP 72
Query: 160 ILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCK 219
+ AV N S +I+ +L++ GA++ K F SP+ + N++ ++L
Sbjct: 73 LCAVLRNREITSNKIKKIVKLLLKFGADINLK-TFNGVSPIVCFIYNSNINNCDML---- 127
Query: 220 ADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLH---KACHVGN 276
LL I N VK NS+ ++ LLH ++ V
Sbjct: 128 -----------RFLLSKGINVNDVK------NSRGYN----------LLHMYLESFSV-K 159
Query: 277 LQIVQMLVKRKFDINAQNRYF-LPPM--FFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP 333
++++L+ ++ + + L PM + + V +YL+++ +N+
Sbjct: 160 KDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK-GVNIETNNNGS 218
Query: 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQS 393
+L++ L + K++S+ + K L+ I+K I + + +G PLL +AK + ++
Sbjct: 219 ESVLESF--LDNNKILSKKEFKVLNFILKYI--KINKKDKKG---FNPLLISAKVDNYEA 271
Query: 394 AKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
YL++ G ++ + ++ D L YA KH NI+M+ +L
Sbjct: 272 FNYLLKLGDDIY---------NVSKDGDTV----LTYAIKH-GNIDMLNRIL 309
Score = 35.1 bits (81), Expect = 0.15
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 23/150 (15%)
Query: 354 IKRLD---QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKY------LIQKGANV 404
+KR D +I+K +ID ++N +G + TPL ++ ++ S K L++ GA++
Sbjct: 43 LKRKDVKIKIVKLLIDNGADVNYKGY-IETPLCAVLRNREITSNKIKKIVKLLLKFGADI 101
Query: 405 NLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLA 464
NL K F + F + S + NN +M++ LL G +VND N L
Sbjct: 102 NL----KTFNGVSPIVCFIYNS-------NINNCDMLRFLLSKGINVNDVKNSRGYNLLH 150
Query: 465 VAIQSGDFQ--IVKELQNYGAQIDKENYLK 492
+ ++S + ++K L ++G + ++ L
Sbjct: 151 MYLESFSVKKDVIKILLSFGVNLFEKTSLY 180
Score = 34.3 bits (79), Expect = 0.25
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 530 KYDEVKKNIEDGACVNVSS--ERRGSALI---YVAWKGYEEIVDLLLDNGADVNFKSATG 584
K VK I++GA VN E A++ + ++IV LLL GAD+N K+ G
Sbjct: 49 KIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNG 108
Query: 585 FTALHMACRFH----SNDNIVRKLLHHGAY 610
+ + C + +N +++R LL G
Sbjct: 109 VSPI--VCFIYNSNINNCDMLRFLLSKGIN 136
Score = 29.3 bits (66), Expect = 7.8
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 26/176 (14%)
Query: 438 IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAA 497
++ LL G DVN+ L + + +IVK L + GA ++ + Y++ A
Sbjct: 16 KNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKGYIETPLCA 75
Query: 498 RIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSAL-- 555
+ + KI ++KL L F GA +N+ + S +
Sbjct: 76 VLRNREI---TSNKIKKIVKLLLKF------------------GADINLKTFNGVSPIVC 114
Query: 556 -IYVAWKGYEEIVDLLLDNGADVN-FKSATGFTALHMACR-FHSNDNIVRKLLHHG 608
IY + +++ LL G +VN K++ G+ LHM F ++++ LL G
Sbjct: 115 FIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFG 170
>gnl|CDD|140343 PTZ00322, PTZ00322,
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase;
Provisional.
Length = 664
Score = 47.6 bits (113), Expect = 2e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 75 LLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG 134
+L TG D N + DGRT L++A G ++V +L+ GA+ D+ G TPL LA G
Sbjct: 100 ILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENG 159
Query: 135 NKNIVKFLLS 144
+ +V+ L
Sbjct: 160 FREVVQLLSR 169
Score = 46.8 bits (111), Expect = 3e-05
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 567 VDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
+LL GAD N + G T LH+AC + + +VR LL GA + D K GKTPL+ A
Sbjct: 98 ARILLTGGADPNCRDYDGRTPLHIAC-ANGHVQVVRVLLEFGADPTLLD-KDGKTPLELA 155
Query: 627 EAGKNRDIIDLL 638
E R+++ LL
Sbjct: 156 EENGFREVVQLL 167
Score = 43.3 bits (102), Expect = 4e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 106 VTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
+L+ GA+ N RD G TPLH+AC G+ +V+ LL AD
Sbjct: 98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL 143
Score = 32.9 bits (75), Expect = 0.72
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 178 ISMLIENGA--NVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
+L+ GA N R+ + +PLH A ++ VV +L++ AD L+ K + PL
Sbjct: 98 ARILLTGGADPNCRD---YDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLE- 153
Query: 236 FAIESNSVKIVEAFLNSKNFDVSISDGDLNS 266
A E+ ++V+ + N+
Sbjct: 154 LAEENGFREVVQLLSRHSQCH---FELGANA 181
>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional.
Length = 489
Score = 47.1 bits (112), Expect = 3e-05
Identities = 50/233 (21%), Positives = 90/233 (38%), Gaps = 47/233 (20%)
Query: 65 WDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY---KMVTLLIHHGANVNDRDE 121
+ + + V+ L+ G D+N+K DG T LY + G +++ +I +GA+ D+
Sbjct: 85 YKHMLDIVKILIENG-ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDK 143
Query: 122 KGYTPLHLACYLGNK---NIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
G+T L + + I+K LL K D+ + L + D D + I+
Sbjct: 144 DGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDAD-IL 202
Query: 179 SMLIENGANVREKMPFT--------------------------------------DFSPL 200
+ ++NG + ++ F+PL
Sbjct: 203 KLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPL 262
Query: 201 HFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
+++V N + E L++ D N I+ LF A E+ S I + LN K
Sbjct: 263 YYSVSHNNRKIFEYLLQLGGDIN-IITELGNTCLFTAFENESKFIFNSILNKK 314
Score = 44.4 bits (105), Expect = 1e-04
Identities = 64/255 (25%), Positives = 101/255 (39%), Gaps = 43/255 (16%)
Query: 360 IIKRIIDRTENINAEGDDMITPL--LFAAKHCD-LQSAKYLIQKGANVNLTETQKAFISD 416
I+K +I+ +IN + D TPL L + + + L+ ++I+ GA+ L
Sbjct: 91 IVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLL--------- 141
Query: 417 ARSSDFCFRSALQYACKHKNNI--EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSG---- 470
F LQ + ++I E++KLLL G D+N +NK K L +
Sbjct: 142 ---DKDGFTM-LQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRI 197
Query: 471 DFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNK 530
D I+K + G I+KEN K+ +N LL N K + N
Sbjct: 198 DADILKLFVDNGFIINKENKSHKKKFMEY------------LNSLLYDN----KRFKKNI 241
Query: 531 YDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHM 590
D + I+ +N E + L Y +I + LL G D+N + G T L
Sbjct: 242 LDFIFSYID----INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFT 297
Query: 591 ACRFHSNDNIVRKLL 605
A + I +L
Sbjct: 298 AFENE-SKFIFNSIL 311
Score = 44.1 bits (104), Expect = 2e-04
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 104 KMVTLLIHHGANVNDRDEKGYTPL-----HLACYLGNKNIVKFLLSKKADVRAKCSMMVT 158
+V L I+ GANVN D + TPL ++ Y +IVK L+ AD+ K S T
Sbjct: 52 DIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGET 111
Query: 159 PILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN---LSVVELL 215
P+ + +S + EI+ +IENGA+ F+ L + + + +++LL
Sbjct: 112 PLYCL---LSNGYINNLEILLFMIENGADTTLLDKD-GFTMLQVYLQSNHHIDIEIIKLL 167
Query: 216 IKCKADTNLI 225
++ D N
Sbjct: 168 LEKGVDINTH 177
Score = 40.6 bits (95), Expect = 0.003
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 43/280 (15%)
Query: 176 EIISMLIENGANVREKMPFTDFS-PL-----HFAVVKKNLSVVELLIKCKADTNLIVKVN 229
+I+ + I GANV ++S PL + K L +V++LI+ AD N
Sbjct: 52 DIVKLFINLGANVNGLD--NEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDG 109
Query: 230 QEPLLFFAIESNSVKIVEAFLNSKNF---------DVSISDGD----LNSLLHKACHVGN 276
+ PL + + SN ++N+ D ++ D D L L H+ +
Sbjct: 110 ETPL--YCLLSNG------YINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHI-D 160
Query: 277 LQIVQMLVKRKFDINAQN---RYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRP 333
++I+++L+++ DIN N +Y +F + R + + + I
Sbjct: 161 IEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHK 220
Query: 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQS 393
++ + SL KR + I I +IN + PL ++ H + +
Sbjct: 221 KKFMEYLNSLLYDN-------KRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKI 273
Query: 394 AKYLIQKGANVN-LTETQKAFISDA--RSSDFCFRSALQY 430
+YL+Q G ++N +TE + A S F F S L
Sbjct: 274 FEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNK 313
Score = 39.4 bits (92), Expect = 0.005
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 105 MVTLLIHHGANVNDRDEKGYTPLHLAC---YLGNKNIVKFLLSKKADVRAKCSMMVTPI- 160
+V +LI +GA++N ++ G TPL+ Y+ N I+ F++ AD T +
Sbjct: 91 IVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQ 150
Query: 161 LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVEL-LIKCK 219
+ + +N D EII +L+E G ++ + LH K N+ ++ ++K
Sbjct: 151 VYLQSNHHIDI----EIIKLLLEKGVDINTHNNKEKYDTLH-CYFKYNIDRIDADILKLF 205
Query: 220 ADTNLIVKVNQEPLLFFAIESNSVKIVEAFL-NSKNFDVSISD 261
D I+ + + + ++ + + L ++K F +I D
Sbjct: 206 VDNGFIINKENK-----SHKKKFMEYLNSLLYDNKRFKKNILD 243
Score = 29.4 bits (66), Expect = 8.6
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 46 IIN--SSSAKSVELTLLCSAVWDNKIRE---VEFLLSTGDHDVNEKLQDGRTALYMAILQ 100
IIN + S K + L S ++DNK + ++F+ S D+N+ + G LY ++
Sbjct: 211 IINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY--IDINQVDELGFNPLYYSVSH 268
Query: 101 GLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR 150
K+ L+ G ++N E G T L A +K I +L+KK +
Sbjct: 269 NNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKN 318
>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel
protein. The Transient Receptor Potential Ca2+ Channel
(TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also
been called the store-operated calcium channel (SOC)
family. The prototypical members include the Drosophila
retinal proteinsTRP and TRPL (Montell and Rubin, 1989;
Hardie and Minke, 1993). SOC members of the family
mediate the entry of extracellular Ca2+ into cells in
responseto depletion of intracellular Ca2+ stores
(Clapham, 1996) and agonist stimulated production of
inositol-1,4,5 trisphosphate (IP3). One member of the
TRP-CCfamily, mammalian Htrp3, has been shown to form a
tight complex with the IP3 receptor (TC #1.A.3.2.1).
This interaction is apparently required for IP3
tostimulate Ca2+ release via Htrp3. The vanilloid
receptor subtype 1 (VR1), which is the receptor for
capsaicin (the ?hot? ingredient in chili peppers) and
servesas a heat-activated ion channel in the pain
pathway (Caterina et al., 1997), is also a member of
this family. The stretch-inhibitable non-selective
cation channel(SIC) is identical to the vanilloid
receptor throughout all of its first 700 residues, but
it exhibits a different sequence in its last 100
residues. VR1 and SICtransport monovalent cations as
well as Ca2+. VR1 is about 10x more permeable to Ca2+
than to monovalent ions. Ca2+ overload probably causes
cell deathafter chronic exposure to capsaicin.
(McCleskey and Gold, 1999) [Transport and binding
proteins, Cations and iron carrying compounds].
Length = 743
Score = 46.6 bits (111), Expect = 4e-05
Identities = 38/152 (25%), Positives = 53/152 (34%), Gaps = 27/152 (17%)
Query: 60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN---- 115
L A +N+ E+ LL G T L AI V ++ H
Sbjct: 56 LFVAAIENENLELTELLLNLSCRGAV----GDTLL-HAISLEYVDAVEAILLHLLAAFRK 110
Query: 116 ------VNDRD----EKGYTPLHLACYLGNKNIVKFLLSKKADV--RAKCSMMVTPILAV 163
ND+ G T LHLA + N IVK LL + A V RA V
Sbjct: 111 SGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVD 170
Query: 164 SANMSED------STDTNEIISMLIENGANVR 189
S E + I+++L E+ A++
Sbjct: 171 SFYHGESPLNAAACLGSPSIVALLSEDPADIL 202
Score = 37.0 bits (86), Expect = 0.040
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCF-RSALQ-YACKHKN 436
IT L AA + + K L+++GA+V F+ F S L AC
Sbjct: 129 ITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAAC--LG 186
Query: 437 NIEMVKLLLLHGADVN 452
+ +V LL AD+
Sbjct: 187 SPSIVALLSEDPADIL 202
Score = 34.7 bits (80), Expect = 0.20
Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 27/155 (17%)
Query: 90 GRTALYMAILQGLYKMVTLLIHHGANVNDR---------DEKGY-----TPLHLACYLGN 135
G TAL++A + Y++V LL+ GA+V R +PL+ A LG+
Sbjct: 128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS 187
Query: 136 KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN-----GANVR- 189
+IV L AD+ S+ T L M + E +S + N +R
Sbjct: 188 PSIVALLSEDPADILTADSLGNT--LLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRD 245
Query: 190 ----EKMP-FTDFSPLHFAVVKKNLSVVELLIKCK 219
E + +PL A + + + L + K
Sbjct: 246 SKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK 280
Score = 31.2 bits (71), Expect = 2.3
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 21/86 (24%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD 612
+AL A + EIV LLL+ GA V + A G D V+ Y+
Sbjct: 130 TALHLAAHRQNYEIVKLLLERGASVPAR-ACG-------------DFFVKSQGVDSFYH- 174
Query: 613 MKDGKTGKTPLKHAEAGKNRDIIDLL 638
G++PL A + I+ LL
Sbjct: 175 ------GESPLNAAACLGSPSIVALL 194
>gnl|CDD|197603 smart00248, ANK, ankyrin repeats. Ankyrin repeats are about 33
amino acids long and occur in at least four consecutive
copies. They are involved in protein-protein
interactions. The core of the repeat seems to be an
helix-loop-helix structure.
Length = 30
Score = 38.3 bits (90), Expect = 2e-04
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 122 KGYTPLHLACYLGNKNIVKFLLSKKADV 149
G TPLHLA GN +VK LL K AD+
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
Score = 35.3 bits (82), Expect = 0.003
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 89 DGRTALYMAILQGLYKMVTLLIHHGANVND 118
DGRT L++A G ++V LL+ GA++N
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 34.5 bits (80), Expect = 0.007
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVND 453
R+ L A ++ N+E+VKLLL GAD+N
Sbjct: 3 RTPLHLAAEN-GNLEVVKLLLDKGADINA 30
Score = 31.0 bits (71), Expect = 0.11
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
D + LH A GNL++V++L+ + DINA
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 31.0 bits (71), Expect = 0.12
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 196 DFSPLHFAVVKKNLSVVELLIKCKADTNL 224
+PLH A NL VV+LL+ AD N
Sbjct: 2 GRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 30.2 bits (69), Expect = 0.20
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVN 578
+ L A G E+V LLLD GAD+N
Sbjct: 4 TPLHLAAENGNLEVVKLLLDKGADIN 29
Score = 29.9 bits (68), Expect = 0.24
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 584 GFTALHMACRFHSNDNIVRKLLHHGA 609
G T LH+A + N +V+ LL GA
Sbjct: 2 GRTPLHLAAE-NGNLEVVKLLLDKGA 26
Score = 29.5 bits (67), Expect = 0.31
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNL 406
TPL AA++ +L+ K L+ KGA++N
Sbjct: 4 TPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 25.6 bits (57), Expect = 7.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDK 487
PL +A ++G+ ++VK L + GA I+
Sbjct: 5 PLHLAAENGNLEVVKLLLDKGADINA 30
>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities.
Length = 30
Score = 38.0 bits (89), Expect = 3e-04
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 122 KGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
G TPLHLA GN +VK LL AD+ A
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 33.4 bits (77), Expect = 0.013
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 89 DGRTALYMAILQGLYKMVTLLIHHGANVN 117
DG T L++A G ++V LL+ HGA++N
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADIN 29
Score = 33.4 bits (77), Expect = 0.017
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINA 292
D N+ LH A GNL++V++L++ DINA
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 33.0 bits (76), Expect = 0.019
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVN 452
+ L A ++ N+E+VKLLL HGAD+N
Sbjct: 3 NTPLHLAARN-GNLELVKLLLEHGADIN 29
Score = 31.5 bits (72), Expect = 0.076
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVN 405
D TPL AA++ +L+ K L++ GA++N
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADIN 29
Score = 30.3 bits (69), Expect = 0.18
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVN 578
+ L A G E+V LLL++GAD+N
Sbjct: 4 TPLHLAARNGNLELVKLLLEHGADIN 29
Score = 30.3 bits (69), Expect = 0.18
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 198 SPLHFAVVKKNLSVVELLIKCKADTN 223
+PLH A NL +V+LL++ AD N
Sbjct: 4 TPLHLAARNGNLELVKLLLEHGADIN 29
Score = 27.6 bits (62), Expect = 1.5
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 584 GFTALHMACRFHSNDNIVRKLLHHGA 609
G T LH+A R + N +V+ LL HGA
Sbjct: 2 GNTPLHLAAR-NGNLELVKLLLEHGA 26
Score = 26.1 bits (58), Expect = 6.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 460 QKPLAVAIQSGDFQIVKELQNYGAQID 486
PL +A ++G+ ++VK L +GA I+
Sbjct: 3 NTPLHLAARNGNLELVKLLLEHGADIN 29
>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel;
Provisional.
Length = 823
Score = 43.7 bits (103), Expect = 3e-04
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 39/159 (24%)
Query: 73 EFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPL----- 127
E L + D D+ + GRT L++A +G V +L+ H NV+ RD G T L
Sbjct: 543 ELLKAKLDPDIGD--SKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600
Query: 128 -----------HLA------------CYLGNKN---IVKFLLSKKADVRAKCSMMVTPIL 161
H A C +N +K LL + +V ++ T
Sbjct: 601 AKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGAT--- 657
Query: 162 AVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPL 200
A+ M+ED D ++ +LI NGA+V + DFSP
Sbjct: 658 ALQVAMAEDHVD---MVRLLIMNGADVDKANTDDDFSPT 693
Score = 42.5 bits (100), Expect = 8e-04
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYD 612
S L+ VA G +++ LL D + + G T LH+A ++ V LL H
Sbjct: 527 SNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAAS-KGYEDCVLVLLKHACNVH 585
Query: 613 MKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPY 652
++D G T L +A + K+ I +L+ FAS+++P+
Sbjct: 586 IRDAN-GNTALWNAISAKHHKIFRILY----HFASISDPH 620
Score = 37.2 bits (86), Expect = 0.031
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 31/116 (26%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTAL--HMACRFHSNDNIV--------- 601
+ L A KGYE+ V +LL + +V+ + A G TAL ++ + H I+
Sbjct: 560 TPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP 619
Query: 602 -------------------RKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
++LL G D +D G T L+ A A + D++ LL
Sbjct: 620 HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSED-HQGATALQVAMAEDHVDMVRLL 674
Score = 36.4 bits (84), Expect = 0.055
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 59 LLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
LLC+A N + ++ LL G +V+ + G TAL +A+ + MV LLI +GA+V
Sbjct: 625 LLCTAAKRNDLTAMKELLKQG-LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV 681
Score = 32.5 bits (74), Expect = 0.94
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
Query: 94 LYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKC 153
L A + + L+ G NV+ D +G T L +A + ++V+ L+ ADV
Sbjct: 626 LCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV---- 681
Query: 154 SMMVTPILAVSANMSED--STDTNEII 178
AN +D T+ E++
Sbjct: 682 ---------DKANTDDDFSPTELRELL 699
Score = 32.5 bits (74), Expect = 1.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 435 KNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKEN 489
+N++ +K LL G +V D+ + L VA+ +V+ L GA +DK N
Sbjct: 632 RNDLTAMKELLKQGLNV-DSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKAN 685
Score = 32.1 bits (73), Expect = 1.1
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 14/74 (18%)
Query: 382 LLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
L AAK DL + K L+++G NV+ + Q A +ALQ A +++MV
Sbjct: 626 LCTAAKRNDLTAMKELLKQGLNVDSEDHQGA-------------TALQVAMAED-HVDMV 671
Query: 442 KLLLLHGADVNDTS 455
+LL+++GADV+ +
Sbjct: 672 RLLIMNGADVDKAN 685
>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional.
Length = 209
Score = 41.7 bits (98), Expect = 6e-04
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 176 EIISMLIENGANVREKMPFTDFSPLH-FAVVKKNLS--VVELLIKCKADTNLIVKVNQEP 232
EI+ LIENGA+V K + S LH + KN+ ++++LI + + +
Sbjct: 67 EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL 126
Query: 233 LLFFAIESN-SVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQ-IVQMLVKRKFDI 290
L + N + +++ ++S ++ D D N++L+ + + I L DI
Sbjct: 127 LHMYMCNFNVRINVIKLLIDSGVSFLNK-DFDNNNILYSYILFHSDKKIFDFLTSLGIDI 185
Query: 291 NAQNRYFLPP 300
N N+
Sbjct: 186 NETNKSGYNC 195
Score = 32.9 bits (75), Expect = 0.35
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 116 VNDRDEKGYTPLH--LACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTD 173
VND ++ TP+ L N I+KFL+ ADV + A+ +S +
Sbjct: 44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV--NFKTRDNNLSALHHYLSFNKNV 101
Query: 174 TNEIISMLIENGANVRE 190
EI+ +LI++G+++ E
Sbjct: 102 EPEILKILIDSGSSITE 118
Score = 32.9 bits (75), Expect = 0.42
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 72 VEFLLSTGDHDVNEKLQDGRTAL---YMAILQGLY-KMVTLLIHHGANVNDRDEKGYTPL 127
++FL+ G DVN K +D + Y++ + + +++ +LI G+++ + DE G L
Sbjct: 69 LKFLIENGA-DVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLL 127
Query: 128 HLACYLGNKN----IVKFLL 143
H+ Y+ N N ++K L+
Sbjct: 128 HM--YMCNFNVRINVIKLLI 145
Score = 32.5 bits (74), Expect = 0.54
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 565 EIVDLLLDNGADVNFKS-ATGFTALHMACRFHSNDN--IVRKLLHHGAYYDMKDGKTGKT 621
EI+ L++NGADVNFK+ +ALH F+ N I++ L+ G+ +D + GK
Sbjct: 67 EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEED-EDGKN 125
Query: 622 PL 623
L
Sbjct: 126 LL 127
Score = 31.7 bits (72), Expect = 1.0
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 534 VKKNIEDGACVNVSSERRGSALI--YVAWKG--YEEIVDLLLDNGADVNFKSATGFTALH 589
+K IE+GA VN + + + Y+++ EI+ +L+D+G+ + + G LH
Sbjct: 69 LKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLH 128
Query: 590 M-ACRFHSNDNIVRKLLHHGAYYDMKD 615
M C F+ N+++ L+ G + KD
Sbjct: 129 MYMCNFNVRINVIKLLIDSGVSFLNKD 155
Score = 29.0 bits (65), Expect = 7.7
Identities = 30/140 (21%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 387 KHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKN-NIEMVKLLL 445
+++ K+LI+ GA+VN ++ D + Y +KN E++K+L+
Sbjct: 62 DKVNVEILKFLIENGADVNF-----------KTRDNNLSALHHYLSFNKNVEPEILKILI 110
Query: 446 LHGADVNDTSNKPKQKPLAVAIQ--SGDFQIVKELQNYGAQIDKENYLKNKEAARIAHST 503
G+ + + K L + + + ++K L + G K+ + I +S
Sbjct: 111 DSGSSITEEDEDGKN-LLHMYMCNFNVRINVIKLLIDSGVSF----LNKDFDNNNILYSY 165
Query: 504 TELEERKKIND-LLKLNLDF 522
KKI D L L +D
Sbjct: 166 ILFHSDKKIFDFLTSLGIDI 185
>gnl|CDD|165157 PHA02795, PHA02795, ankyrin-like protein; Provisional.
Length = 437
Score = 39.6 bits (92), Expect = 0.005
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN 135
D+N+ GRT LY AI G +V+ L+ +GANVN GYT L +A G+
Sbjct: 213 DINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266
Score = 32.7 bits (74), Expect = 0.76
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 552 GSALIYVA-WKGYEEIVDLLLDNGADVNFKSATGFTALHMA 591
G L+Y A + GY ++V LL+NGA+VN + G+T L +A
Sbjct: 221 GRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVA 261
>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional.
Length = 764
Score = 38.4 bits (89), Expect = 0.016
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 68 KIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLY---KMVTLLIHHGANVNDRDEKGY 124
+ +++++ G ++N + + A L +Y ++ L ++G NVN ++
Sbjct: 154 DLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLI 213
Query: 125 TPLHLACYLGN--KNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLI 182
TPLH GN +++K ++ D+ KC ++PI+ N+ D+ + EI ++ I
Sbjct: 214 TPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINI--DNINP-EITNIYI 270
Query: 183 EN 184
E+
Sbjct: 271 ES 272
Score = 31.0 bits (70), Expect = 2.6
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 37/189 (19%)
Query: 276 NLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNL 335
++ I++ L ++N QN + + P+ HT+ L ++ ++ K L
Sbjct: 191 DIDILEWLCNNGVNVNLQNNHLITPL---------HTY-----LITGNVCASVIKKIIEL 236
Query: 336 LLDTVMSLKDPKVMS--QTQIKRLDQIIKRIID-RTENINAEGDDMITPLLFA----AKH 388
D M +K MS T I +D I I + E+++ I +L + A++
Sbjct: 237 GGD--MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARN 294
Query: 389 CDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL-QYACKHKNNIEMVKLLLLH 447
D+ +Q G ++ D R+ L QY +H + +++KLL +
Sbjct: 295 IDISVVYSFLQPGVKLHY-------------KDSAGRTCLHQYILRHNISTDIIKLLHEY 341
Query: 448 GADVNDTSN 456
G D+N+ N
Sbjct: 342 GNDLNEPDN 350
Score = 29.5 bits (66), Expect = 6.9
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 20/89 (22%)
Query: 90 GRTALYMAILQGLYK--MVTLLIHHGANVNDRDEKGYTPLHLACYLG------------- 134
GRT L+ IL+ ++ LL +G ++N+ D G T LH YL
Sbjct: 317 GRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLH--TYLSMLSVVNILDPETD 374
Query: 135 ---NKNIVKFLLSKKADVRAKCSMMVTPI 160
++++ L+S AD+ A + TP+
Sbjct: 375 NDIRLDVIQCLISLGADITAVNCLGYTPL 403
>gnl|CDD|165231 PHA02917, PHA02917, ankyrin-like protein; Provisional.
Length = 661
Score = 37.3 bits (86), Expect = 0.034
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 549 ERRGSALIYVAWK-GYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
++RG L++ A + + +V LLL++G+DVN +S G+T + +A N +++ LL H
Sbjct: 449 DKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCH 508
Query: 608 GAYYD 612
D
Sbjct: 509 KPTLD 513
Score = 32.3 bits (73), Expect = 1.2
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLG-NKNIVK 140
D+N + G T L+ A+ +V+LL+ G++VN R GYT + +A N ++K
Sbjct: 444 DINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLK 503
Query: 141 FLLSKK 146
LL K
Sbjct: 504 MLLCHK 509
>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional.
Length = 300
Score = 35.0 bits (80), Expect = 0.10
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 106 VTLLIHHGANVND-RDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPI 160
LLI +GA+VN +E TPL+++ G ++ LLS AD+ + + MVTPI
Sbjct: 86 AKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPI 141
Score = 35.0 bits (80), Expect = 0.12
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 428 LQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDK 487
L YA N+ KLL+ +GADVN + + K PL +++ G + ++ L +YGA I
Sbjct: 74 LIYAIDCDNDDA-AKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADI-- 130
Query: 488 ENYLKNK 494
N N
Sbjct: 131 -NIQTND 136
Score = 32.3 bits (73), Expect = 0.77
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 92 TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNI 138
T LY+++L G K + +L+ +GA++N + TP+ LA + N +
Sbjct: 106 TPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFL 152
Score = 30.0 bits (67), Expect = 3.9
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 173 DTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIV 226
D ++ +LI GA+V +PL+ +V+ L +E+L+ AD N+
Sbjct: 81 DNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQT 134
>gnl|CDD|165154 PHA02791, PHA02791, ankyrin-like protein; Provisional.
Length = 284
Score = 32.7 bits (74), Expect = 0.59
Identities = 53/219 (24%), Positives = 84/219 (38%), Gaps = 49/219 (22%)
Query: 90 GRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADV 149
G +ALY AI ++V L++ GA N + + PLH A L + IVK LL D
Sbjct: 30 GHSALYYAIADNNVRLVCTLLNAGALKNLLENE--FPLHQAATLEDTKIVKILLFSGMD- 86
Query: 150 RAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNL 209
+ +D +T L++AV N+
Sbjct: 87 ---------------DSQFDDKGNT------------------------ALYYAVDSGNM 107
Query: 210 SVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNS--KNFDVSISDGDLNSL 267
V+L +K K + + A+ N V IV FL+ FD++I L S
Sbjct: 108 QTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAI----LLSC 163
Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNR-YFLPPMFFAI 305
+H G++ ++ +L+ N N F+P + AI
Sbjct: 164 IHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAI 202
Score = 31.2 bits (70), Expect = 1.6
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 63 AVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK 122
A+ DN +R V LL+ G + L + L+ A K+V +L+ G + + D+K
Sbjct: 37 AIADNNVRLVCTLLNAG---ALKNLLENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDK 93
Query: 123 GYTPLHLACYLGNKNIVKFLLSK 145
G T L+ A GN VK + K
Sbjct: 94 GNTALYYAVDSGNMQTVKLFVKK 116
>gnl|CDD|202685 pfam03564, DUF1759, Protein of unknown function (DUF1759). This is
a family of proteins of unknown function. Most of the
members are gag-polyproteins.
Length = 146
Score = 31.6 bits (72), Expect = 0.69
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 334 NLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD-MITPLLF 384
LL+ +M L S +Q++RL II + E + DD ++ LL
Sbjct: 75 RSLLNKLMKLPSTNNDSVSQLRRLYDEANEIIRQLEQLGENADDTILAHLLL 126
>gnl|CDD|206145 pfam13975, gag-asp_proteas, gag-polyprotein putative aspartyl
protease. This family of putative aspartyl proteases is
found pre-dominantly in retroviral proteins.
Length = 72
Score = 29.2 bits (66), Expect = 1.4
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMAC 592
R G + V+ G E V L+D GA +F S + L +
Sbjct: 4 GRDGLVTVEVSIGGVE--VKALVDTGATHSFISESLAARLGLPL 45
>gnl|CDD|227731 COG5444, COG5444, Uncharacterized conserved protein [Function
unknown].
Length = 565
Score = 31.3 bits (71), Expect = 2.1
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 11/63 (17%)
Query: 488 ENYLKNKEAARIAHSTTELEERKK-----------INDLLKLNLDFLKNVRSNKYDEVKK 536
E +LK++ +EE+KK I DL KL+ + K+ + K
Sbjct: 98 EAFLKHELPNGYDRYEEIMEEQKKAIKDILSDVSHILDLGKLDTEDFKDEVDSARKHAKD 157
Query: 537 NIE 539
+E
Sbjct: 158 TLE 160
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate
forming enzymes. This family contains benzoate CoA
ligase (BCL) and related ligases that catalyze the
acylation of benzoate derivatives, 2-aminobenzoate and
4-hydroxybenzoate. Aromatic compounds represent the
second most abundant class of organic carbon compounds
after carbohydrates. Xenobiotic aromatic compounds are
also a major class of man-made pollutants. Some bacteria
use benzoate as the sole source of carbon and energy
through benzoate degradation. Benzoate degradation
starts with its activation to benzoyl-CoA by benzoate
CoA ligase. The reaction catalyzed by benzoate CoA
ligase proceeds via a two-step process; the first
ATP-dependent step forms an acyl-AMP intermediate, and
the second step forms the acyl-CoA ester with release of
the AMP.
Length = 436
Score = 30.4 bits (69), Expect = 3.3
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 272 CHVGNLQIVQMLVKRKFDINAQNRYF-LPPMFFAIGMG 308
H L + + + +R F +FFA G+G
Sbjct: 112 RHRDPLTFAEAFARELLGLQPGDRIFSSSKLFFAYGLG 149
>gnl|CDD|227752 COG5465, COG5465, Uncharacterized conserved protein [Function
unknown].
Length = 166
Score = 29.4 bits (66), Expect = 4.7
Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 17/70 (24%)
Query: 545 NVSSERRGSALIYVAWKGYEEIVDLLLDNGAD--VNFKSATGFTALHMACRF-----HSN 597
+ ERR I + G N D ++F F AL +AC F S
Sbjct: 26 DWPFERREDGEIAITVAG----------NWTDYHLSFSWREEFEALQLACAFDIKVPESR 75
Query: 598 DNIVRKLLHH 607
V +LL
Sbjct: 76 RAEVARLLSL 85
>gnl|CDD|223020 PHA03246, PHA03246, large tegument protein UL36; Provisional.
Length = 3095
Score = 30.3 bits (68), Expect = 4.9
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
+++ LL G+ ++ N K L V++Q+G + +EL ++D N AAR
Sbjct: 936 QLLGDLLEIGSHLDVPENLVTWKGLMVSVQTGGWISRRELDLLLKEVD----AVNDNAAR 991
Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIED 540
+ TELE ++ + D V K DE K
Sbjct: 992 RETALTELERLHELESRIASYTDLETTVDLQKLDEALKLANS 1033
>gnl|CDD|185746 cd08915, V_Alix_like, Protein-interacting V-domain of mammalian
Alix and related domains. This superfamily contains the
V-shaped (V) domain of mammalian Alix (apoptosis-linked
gene-2 interacting protein X), His-Domain type N23
protein tyrosine phosphatase (HD-PTP, also known as
PTPN23), Bro1 and Rim20 (also known as PalA) from
Saccharomyces cerevisiae, and related domains. Alix,
HD-PTP, Bro1, and Rim20 all interact with the ESCRT
(Endosomal Sorting Complexes Required for Transport)
system. Alix, also known as apoptosis-linked gene-2
interacting protein 1 (AIP1), participates in membrane
remodeling processes during the budding of enveloped
viruses, vesicle budding inside late endosomal
multivesicular bodies (MVBs), and the abscission
reactions of mammalian cell division. It also functions
in apoptosis. HD-PTP functions in cell migration and
endosomal trafficking, Bro1 in endosomal trafficking,
and Rim20 in the response to the external pH via the
Rim101 pathway. The Alix V-domain contains a binding
site, partially conserved in this superfamily, for the
retroviral late assembly (L) domain YPXnL motif. The
Alix V-domain is also a dimerization domain. Members of
this superfamily have an N-terminal Bro1-like domain,
which binds components of the ESCRT-III complex. The
Bro1-like domains of Alix and HD-PTP can also bind human
immunodeficiency virus type 1 (HIV-1) nucleocapsid. Many
members, including Alix, HD-PTP, and Bro1, also have a
proline-rich region (PRR), which binds multiple partners
in Alix, including Tsg101 (tumor susceptibility gene
101, a component of ESCRT-1) and the apoptotic protein
ALG-2. The C-terminal portion (V-domain and PRR) of Bro1
interacts with Doa4, a ubiquitin thiolesterase needed to
remove ubiquitin from MVB cargoes; it interacts with a
YPxL motif in Doa4s catalytic domain to stimulate its
deubiquitination activity. Rim20 may bind the ESCRT-III
subunit Snf7, bringing the protease Rim13 (a
YPxL-containing transcription factor) into proximity
with Rim101, and promoting the proteolytic activation of
Rim101. HD-PTP is encoded by the PTPN23 gene, a tumor
suppressor gene candidate often absent in human kidney,
breast, lung, and cervical tumors. HD-PTP has a
C-terminal catalytically inactive tyrosine phosphatase
domain.
Length = 342
Score = 29.6 bits (67), Expect = 5.2
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 476 KELQNYGAQIDKENYLKNKEAARIAHSTTELEE---RKKINDLLKLNLDFLKNVR--SNK 530
+ L+ + + K K+ I +E K ND L + L+++ K
Sbjct: 247 EHLKKFDKDLTYVEKTKKKQIELIKEIDAANQEFSQVKNSNDSLDPREEALQDLEASYKK 306
Query: 531 YDEVKKNIEDG 541
Y E+K+N+ +G
Sbjct: 307 YLELKENLNEG 317
>gnl|CDD|216956 pfam02274, Amidinotransf, Amidinotransferase. This family contains
glycine (EC:2.1.4.1) and inosamine (EC:2.1.4.2)
amidinotransferases, enzymes involved in creatine and
streptomycin biosynthesis respectively. This family also
includes arginine deiminases, EC:3.5.3.6. These enzymes
catalyze the reaction: arginine + H2O <=> citrulline +
NH3. Also found in this family is the Streptococcus anti
tumour glycoprotein.
Length = 286
Score = 29.5 bits (67), Expect = 5.2
Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 20/88 (22%)
Query: 302 FFAIGMG-RKHTHVAEYLLQQ--------DSINVNLPIKRPNLLLDTVMSLKD------- 345
A G+ R E L + ++ +N P RP L+ +MS+ D
Sbjct: 132 VVAYGVSERTDEEGIEELARTLGYEPVAFHAVAINDPKGRPIYHLNVMMSVGDDDAVVCL 191
Query: 346 PKVMSQTQIKRLDQII----KRIIDRTE 369
++ + + + + + K II+ +E
Sbjct: 192 DSILDAAEREEVAKALGESGKEIIEISE 219
>gnl|CDD|224893 COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid
transport and metabolism].
Length = 557
Score = 30.0 bits (68), Expect = 5.2
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 256 DVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
DVS +DG+L+SLL G ++ Q L R F A + YF+
Sbjct: 54 DVSEADGELDSLLD---PEGPIKEAQELAARVF--GADHTYFV 91
>gnl|CDD|116017 pfam07395, Mig-14, Mig-14. This family contains a number of
bacterial mig-14 proteins (approximately 270 residues
long). In Salmonella, mig-14 contributes to resistance
to antimicrobial peptides, although the mechanism is not
fully understood.
Length = 264
Score = 29.5 bits (66), Expect = 5.9
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 486 DKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVN 545
+ YL I++ +K+ + + DF K R N+ EV+ E G V
Sbjct: 75 HRTRYLSALNQPNISNLKA----QKEQLAMARAPEDFSKKFRYNQRREVRLFEEAGGEVR 130
Query: 546 VSSE 549
SE
Sbjct: 131 PVSE 134
>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional.
Length = 154
Score = 28.7 bits (64), Expect = 6.3
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL 215
+ D D E + +L+E GA++ K +PLH AV +N + L
Sbjct: 64 NPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWL 111
>gnl|CDD|147995 pfam06128, Shigella_OspC, Shigella flexneri OspC protein. This
family consists of the Shigella flexneri specific
protein OspC. The function of this family is unknown but
it is thought that Osp proteins may be involved in post
invasion events related to virulence. Since bacterial
pathogens adapt to multiple environments during the
course of infecting a host, it has been proposed that
Shigella evolved a mechanism to take advantage of a
unique intracellular cue, which is mediated through
MxiE, to express proteins when the organism reaches the
eukaryotic cytosol.
Length = 284
Score = 29.1 bits (65), Expect = 7.3
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 72 VEFLLSTGDHDVNEKLQ---DGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
+E+ ++ G DVN K + G T L A+ G +M+ L+ HGA ++
Sbjct: 233 LEYFINRGLVDVNAKFEKVNSGDTMLDNAVKYGNREMIAALLKHGAILDRN 283
>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional.
Length = 169
Score = 28.5 bits (63), Expect = 8.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 537 NIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFK-SATGFTALHMA 591
+ C+++++E+ + A E I+D L++ GAD+N + G TALH+A
Sbjct: 57 DDAGQMCIHIAAEK------HEAQLAAE-IIDHLIELGADINAQEMLEGDTALHLA 105
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.319 0.134 0.381
Gapped
Lambda K H
0.267 0.0786 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 35,545,056
Number of extensions: 3505918
Number of successful extensions: 3647
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3319
Number of HSP's successfully gapped: 224
Length of query: 710
Length of database: 10,937,602
Length adjustment: 104
Effective length of query: 606
Effective length of database: 6,324,786
Effective search space: 3832820316
Effective search space used: 3832820316
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (27.9 bits)