RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15068
(710 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 162 bits (409), Expect = 3e-44
Identities = 101/439 (23%), Positives = 165/439 (37%), Gaps = 41/439 (9%)
Query: 57 LTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANV 116
LT L A + + V+ LL G N T L+MA G ++ L+ + A V
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59
Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
N + + TPLH A +G+ N+VK LL A+ + TP E
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTP------LHIAAREGHVE 113
Query: 177 IISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFF 236
+ L+E A+ F+PLH A + V ELL++ A N K P L
Sbjct: 114 TVLALLEKEASQACMTKK-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP-LHV 171
Query: 237 AIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRY 296
A+ N++ IV+ L + + + LH A +++ + L++ NA++
Sbjct: 172 AVHHNNLDIVK-LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQ 230
Query: 297 FLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKR 356
+ P+ A G N NL K L V V
Sbjct: 231 GVTPLHLAAQEGHAEMVALLL---SKQANGNLGNKSGLTPLHLVAQEGHVPVA------- 280
Query: 357 LDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISD 416
+I ++A TPL A+ + +++ K+L+Q A+VN
Sbjct: 281 -----DVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK--------- 326
Query: 417 ARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVK 476
S L A + + ++V LLL +GA N+ S+ PLA+A + G +
Sbjct: 327 ----TKLGYSPLHQAAQQ-GHTDIVTLLLKNGASPNEVSSD-GTTPLAIAKRLGYISVTD 380
Query: 477 ELQNYGAQIDKENYLKNKE 495
L+ + + +K
Sbjct: 381 VLKVVTDETSFVL-VSDKH 398
Score = 136 bits (343), Expect = 2e-35
Identities = 96/445 (21%), Positives = 170/445 (38%), Gaps = 60/445 (13%)
Query: 199 PLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVS 258
PLH A +L +V+ L++ A N + V E L A + ++ + L V+
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPN-VSNVKVETPLHMAARAGHTEVAKYLL-QNKAKVN 60
Query: 259 ISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
D + LH A +G+ +V++L++ + N P+ A G T +A
Sbjct: 61 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL- 119
Query: 319 LQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDM 378
+ + K+ L + + + +++R + NA G +
Sbjct: 120 --EKEASQACMTKKGFTPLHVAAKYGKVR------------VAELLLERDAHPNAAGKNG 165
Query: 379 ITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
+TPL A H +L K L+ +G + + S + + L A K N
Sbjct: 166 LTPLHVAVHHNNLDIVKLLLPRGGSPH-------------SPAWNGYTPLHIAAKQ--NQ 210
Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
V LL + + PL +A Q G ++V L + A + L NK
Sbjct: 211 VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN----LGNKSGLT 266
Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYV 558
H + E + D+L I+ G V+ ++ + L
Sbjct: 267 PLHLVAQ-EGHVPVADVL---------------------IKHGVMVDATTRMGYTPLHVA 304
Query: 559 AWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT 618
+ G ++V LL + ADVN K+ G++ LH A + + +IV LL +GA +
Sbjct: 305 SHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ-QGHTDIVTLLLKNGASPNEVS-SD 362
Query: 619 GKTPLKHAEAGKNRDIIDLLHLIDN 643
G TPL A+ + D+L ++ +
Sbjct: 363 GTTPLAIAKRLGYISVTDVLKVVTD 387
Score = 77.3 bits (189), Expect = 1e-15
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 8/209 (3%)
Query: 27 LFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVNEK 86
L ++ + LQ ++++ +T L A + V L + + N
Sbjct: 202 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALL-LSKQANGNLG 260
Query: 87 LQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK 146
+ G T L++ +G + +LI HG V+ GYTPLH+A + GN +VKFLL +
Sbjct: 261 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 320
Query: 147 ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVK 206
ADV AK + +P+ + +I+++L++NGA+ E +PL A
Sbjct: 321 ADVNAKTKLGYSPLHQAAQQGHT------DIVTLLLKNGASPNEVSSD-GTTPLAIAKRL 373
Query: 207 KNLSVVELLIKCKADTNLIVKVNQEPLLF 235
+SV ++L +T+ ++ ++ + F
Sbjct: 374 GYISVTDVLKVVTDETSFVLVSDKHRMSF 402
Score = 44.6 bits (104), Expect = 3e-05
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 586 TALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
T LH+A + IV+ LL GA ++ + +TPL A + ++ L
Sbjct: 2 TPLHVASF-MGHLPIVKNLLQRGASPNVSN-VKVETPLHMAARAGHTEVAKYL 52
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 103 bits (257), Expect = 6e-25
Identities = 49/294 (16%), Positives = 103/294 (35%), Gaps = 12/294 (4%)
Query: 25 HHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDHDVN 84
H L S+ + S ++N + K L ++ L + + +
Sbjct: 8 HDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNS 67
Query: 85 EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR-DEKGYTPLHLACYLGNKNIVKFLL 143
E + +++ L ++ + N+N DE G TPLH + N +VK L+
Sbjct: 68 EGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV 127
Query: 144 SKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPL--- 200
++ +M + ++ +++ + T E + + + + M T +
Sbjct: 128 KHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIIT 187
Query: 201 -----HFAVVKKNLSV-VELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKN 254
A K L + + ++K + +E I+E
Sbjct: 188 SGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI 247
Query: 255 F--DVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIG 306
++ D + ++ L+ A +GN+ IV L+ D N+ L P+ F G
Sbjct: 248 IANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 301
Score = 76.6 bits (187), Expect = 7e-16
Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 38/324 (11%)
Query: 313 HVAEYLLQQDSINVNLPIKR---PNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTE 369
+ L D ++ L I + ++ D +K + + + ++ + + +
Sbjct: 4 ITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSS 63
Query: 370 NINAEGDDMITPLLFAAKHCDLQSAKY-LIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
N N+EG + LQ N+N+ D + L
Sbjct: 64 NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP------------VDEHGNTPL 111
Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQI------VKELQNYG 482
+ N+E+VK L+ HG++ N + + ++ + L
Sbjct: 112 HWLTSI-ANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL 170
Query: 483 AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA 542
D N + T K D+L + +N K++ +
Sbjct: 171 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK 230
Query: 543 CVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVR 602
E +DL +N + + G T L++A R N +IV
Sbjct: 231 NGERKDS-------------ILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVD 276
Query: 603 KLLHHGAYYDMKDGKTGKTPLKHA 626
LL +GA + + K+G P+
Sbjct: 277 ALLDYGADPFIAN-KSGLRPVDFG 299
Score = 67.0 bits (162), Expect = 1e-12
Identities = 38/306 (12%), Positives = 95/306 (31%), Gaps = 39/306 (12%)
Query: 104 KMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAV 163
K++ L N N++ K L + + + L + ++ ++ V
Sbjct: 20 KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 79
Query: 164 SANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTN 223
S + + E+ N+ + +PLH+ NL +V+ L+K ++
Sbjct: 80 SFD-----SLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL 134
Query: 224 LIVKVNQEP--LLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ 281
+ + ++ + EA L+ + + D ++LH +
Sbjct: 135 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCS 194
Query: 282 MLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVM 341
K DI +++++ + + +
Sbjct: 195 AAAKYYLDILM-----------------------GWIVKKQNRPIQSGTNEKESKPNDKN 231
Query: 342 SLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKG 401
+ ++ +K + +NA+ + T L AA+ ++ L+ G
Sbjct: 232 GERKDSILENLDLKWIIA---------NMLNAQDSNGDTCLNIAARLGNISIVDALLDYG 282
Query: 402 ANVNLT 407
A+ +
Sbjct: 283 ADPFIA 288
Score = 65.1 bits (157), Expect = 5e-12
Identities = 19/131 (14%), Positives = 37/131 (28%), Gaps = 1/131 (0%)
Query: 1 MIEEISHRRNSGLVHSVKESSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLL 60
+ + L H + S ++ + Q S E
Sbjct: 169 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 228
Query: 61 CSAVWDNKIREVEFLLSTG-DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
L + +N + +G T L +A G +V L+ +GA+
Sbjct: 229 DKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA 288
Query: 120 DEKGYTPLHLA 130
++ G P+
Sbjct: 289 NKSGLRPVDFG 299
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 100 bits (248), Expect = 8e-24
Identities = 62/367 (16%), Positives = 117/367 (31%), Gaps = 93/367 (25%)
Query: 89 DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEK-GYTPLHLACYLGNKNIVKFLLSKKA 147
+ L A+ +V L+ GANVN ++E+ G+TPLH A + ++IV+ LL A
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 148 DVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKK 207
D + T + + + L + + F F+ A V
Sbjct: 64 DPVLRKKNGAT-------PFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 116
Query: 208 NLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSL 267
+ ++ L K A+ N D +
Sbjct: 117 KVKALKFLYKRGANVN-------------------------LRRKTKEDQERLRKGGATA 151
Query: 268 LHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
L A G+++++++L+ D+NA + + A+
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV------------- 198
Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAA 386
+ I ++D ++N G+ TPL+ A
Sbjct: 199 -------------------------------EAITHLLLDHGADVNVRGERGKTPLILAV 227
Query: 387 KHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
+ L + L+ Q+ +N T D ++AL A + ++ +LL
Sbjct: 228 EKKHLGLVQRLLEQEHIEINDT-------------DSDGKTALLLAVEL-KLKKIAELLC 273
Query: 446 LHGADVN 452
GA +
Sbjct: 274 KRGASTD 280
Score = 95.4 bits (236), Expect = 3e-22
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 11/272 (4%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDHDVNEK-LQDGRTALYMAILQGLYKMVTLLIHHGANV 116
LL AV + + V+ LL G +VN + + G T L+ A+ +V LL+ HGA+
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65
Query: 117 NDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNE 176
R + G TP LA G+ ++K LSK ADV T + + +
Sbjct: 66 VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125
Query: 177 IISMLIENGANVREKMPFTD---FSPLHFAVVKKNLSVVELLI-KCKADTNLIVK--VNQ 230
+ +E + L A K ++ V+++L+ + AD N N
Sbjct: 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 185
Query: 231 EPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRK-FD 289
+ + + V+ + L DV++ + L A +L +VQ L++++ +
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 245
Query: 290 INAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
IN + + A+ + +AE L ++
Sbjct: 246 INDTDSDGKTALLLAVELK--LKKIAELLCKR 275
Score = 88.9 bits (219), Expect = 4e-20
Identities = 69/355 (19%), Positives = 122/355 (34%), Gaps = 77/355 (21%)
Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYF-LPPMFFAIGMGRKHTHVAEYLLQQ 321
+ N LL KA ++ +VQ L++ ++N Q P+ A+ M + E LL+
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS--REDIVELLLRH 61
Query: 322 DSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITP 381
+ V I +++K + + ++N T
Sbjct: 62 GADPVL-------------RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTA 108
Query: 382 LLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMV 441
+ AA + +++ K+L ++GANVNL K R +AL A + ++E++
Sbjct: 109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGG---ATALMDAAEK-GHVEVL 164
Query: 442 KLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAH 501
K+LL GA ++ + +
Sbjct: 165 KILLDE---------------------------------MGADVNACDNMGRNALIHALL 191
Query: 502 STTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWK 561
S+ + + + L ++ GA VNV ER + LI K
Sbjct: 192 SSDDSDVEAITHLL----------------------LDHGADVNVRGERGKTPLILAVEK 229
Query: 562 GYEEIVDLLLD-NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKD 615
+ +V LL+ ++N + G TAL +A I L GA D D
Sbjct: 230 KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE-LKLKKIAELLCKRGASTDCGD 283
Score = 83.5 bits (205), Expect = 3e-18
Identities = 48/291 (16%), Positives = 103/291 (35%), Gaps = 35/291 (12%)
Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL-NSLLHKACHVGNLQIVQMLVKR 286
V LL A+++ V +V+ L +V+ + + + LH A + IV++L++
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61
Query: 287 KFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDP 346
D + + P A G D + ++ + K
Sbjct: 62 GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD--FYGFTAFMEAAVYGKVK 119
Query: 347 KVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQK-GANVN 405
+ + + ++ + E + G T L+ AA+ ++ K L+ + GA+VN
Sbjct: 120 ALKFLYKRGANVNLRRKTKEDQERLRKGGA---TALMDAAEKGHVEVLKILLDEMGADVN 176
Query: 406 LTETQKAFI------------------------SDARSSDFCFRSALQYACKHKNNIEMV 441
+ +D ++ L A + ++ +V
Sbjct: 177 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK-KHLGLV 235
Query: 442 KLLLLH-GADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYL 491
+ LL ++NDT + + L +A++ +I + L GA D + +
Sbjct: 236 QRLLEQEHIEINDTDSD-GKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285
Score = 82.3 bits (202), Expect = 8e-18
Identities = 65/281 (23%), Positives = 105/281 (37%), Gaps = 37/281 (13%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIE 439
L+ A ++ D+ + L++ GANVN E + + L A + + +
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQE------------EEGGWTPLHNAVQM-SRED 53
Query: 440 MVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN---KEA 496
+V+LLL HGAD +A +G +++K + GA +++ ++ EA
Sbjct: 54 IVELLLRHGADPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEA 112
Query: 497 ARIAHSTTELEERKKINDLLKLNLDFLKN--------------VRSNKYDEVKKNI-EDG 541
A K+ ++ + +K + E G
Sbjct: 113 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 172
Query: 542 ACVNVSSERRGSALIYVAWKG----YEEIVDLLLDNGADVNFKSATGFTALHMACRFHSN 597
A VN +ALI+ E I LLLD+GADVN + G T L +A
Sbjct: 173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232
Query: 598 DNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
+ R L + D GKT L A K + I +LL
Sbjct: 233 GLVQRLLEQEHIEINDTD-SDGKTALLLAVELKLKKIAELL 272
Score = 80.4 bits (197), Expect = 4e-17
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 61 CSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMV-TLLIHHGANVNDR 119
+ D+ + + LL DVN + + G+T L +A+ + +V LL +ND
Sbjct: 190 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT 249
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAK 152
D G T L LA L K I + L + A
Sbjct: 250 DSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282
Score = 80.0 bits (196), Expect = 5e-17
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 48/218 (22%)
Query: 88 QDGRTALYMAILQGLYKMVTLLIHHGANVNDRD----------EKGYTPLHLACYLGNKN 137
G TA A + G K + L GANVN R + G T L A G+
Sbjct: 103 FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 162
Query: 138 IVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTD 196
++K LL + ADV A +M + + A +S D +D I +L+++GA+V +
Sbjct: 163 VLKILLDEMGADVNACDNMGRNAL--IHALLSSDDSDVEAITHLLLDHGADVNVRGER-G 219
Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFD 256
+PL AV KK+L +V+ L L ++ +
Sbjct: 220 KTPLILAVEKKHLGLVQRL----------------------------------LEQEHIE 245
Query: 257 VSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQN 294
++ +D D + L A + +I ++L KR + +
Sbjct: 246 INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 60.4 bits (145), Expect = 2e-10
Identities = 21/63 (33%), Positives = 32/63 (50%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
T L AV + V+ LL ++N+ DG+TAL +A+ L K+ LL GA+ +
Sbjct: 221 TPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280
Query: 118 DRD 120
D
Sbjct: 281 CGD 283
Score = 58.4 bits (140), Expect = 6e-10
Identities = 53/278 (19%), Positives = 89/278 (32%), Gaps = 24/278 (8%)
Query: 426 SALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQI 485
L A ++ ++++V+ LL GA+VN + PL A+Q IV+ L +GA
Sbjct: 7 HLLIKAVQN-EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65
Query: 486 DKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVN 545
A + L L K N+ D A V
Sbjct: 66 VLRKKNGATPFLLAAI----------AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115
Query: 546 VSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
+ A D G TAL A + +++ LL
Sbjct: 116 GKVKALKFLYKRGANVNLRR------KTKEDQERLRKGGATALMDAAE-KGHVEVLKILL 168
Query: 606 -HHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMN 664
GA + D + + + D+ + HL+ + A V N + L
Sbjct: 169 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAV 227
Query: 665 SAKQLGLVHVFEIMKVV----KNYAGETLIGVARKMNY 698
K LGLV + + + G+T + +A ++
Sbjct: 228 EKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 265
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 93.4 bits (231), Expect = 3e-21
Identities = 38/328 (11%), Positives = 85/328 (25%), Gaps = 45/328 (13%)
Query: 36 EDAFGYFLQ-GIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDH----------DVN 84
E+ F +F+ ++ + E + N + + L H D +
Sbjct: 25 ENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAH 84
Query: 85 EKLQDGRTALYMAILQG---LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
+K ++A + G + LL+ V + Y LA G+ +++
Sbjct: 85 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 144
Query: 142 LLSKKADVRAK--CSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKM--PFTDF 197
L + + N + L E M +
Sbjct: 145 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLN------RLCELAPTEATAMIQAENYY 198
Query: 198 SPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEP--------LLFFAIESNSVKIV--- 246
+ AV + + +V+ L+ C E + +
Sbjct: 199 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKL 258
Query: 247 ---EAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLP---- 299
+ + + + L + L ++ L+ +P
Sbjct: 259 SNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDAN 318
Query: 300 -PMFFAIGMGRKHTHVAEYLLQQDSINV 326
+ A+ +G + LL S+
Sbjct: 319 ELLRLALRLG--NQGACALLLSIPSVLA 344
Score = 78.4 bits (192), Expect = 3e-16
Identities = 39/371 (10%), Positives = 83/371 (22%), Gaps = 64/371 (17%)
Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA 304
+ + F+++ + + Q+ Q+L N +
Sbjct: 27 LFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKK 86
Query: 305 IGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRI 364
VA +I LDT+ L
Sbjct: 87 GIKSEVICFVA-------AITGCSSA------LDTLCLL--------------------- 112
Query: 365 IDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCF 424
+ E + + AA++ L L +
Sbjct: 113 LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI-----------MAMIQAEN 161
Query: 425 RSALQYACKHKNNIEMVKLLLLHGADVND--TSNKPKQKPLAVAIQSGDFQIVKELQNYG 482
A + A ++ ++ ++ L + A+ G ++ L +
Sbjct: 162 YHAFRLAAEN-GHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 220
Query: 483 AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGA 542
+ + +N L +++ F + +D V K+
Sbjct: 221 VMLAY----AEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKS----- 271
Query: 543 CVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSA-----TGFTALHMACRFHSN 597
+ LI + + + LL L +A R N
Sbjct: 272 -ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALR-LGN 329
Query: 598 DNIVRKLLHHG 608
LL
Sbjct: 330 QGACALLLSIP 340
Score = 71.5 bits (174), Expect = 5e-14
Identities = 35/311 (11%), Positives = 69/311 (22%), Gaps = 40/311 (12%)
Query: 344 KDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGAN 403
DP++ I + I ++ + Q + L A+
Sbjct: 12 NDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAH 71
Query: 404 VNLTETQKAFISDARSSDFCFRSALQYACK--HKNNIEMVKLLLLHGADVNDTSNKPKQK 461
N K SDA A + ++ + LLL V + +
Sbjct: 72 YN--RNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE-NYQ 128
Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD 521
+A ++G ++ L A +
Sbjct: 129 AFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLN---------- 178
Query: 522 FLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKS 581
L + + + + A +G+ +++ LLD + +
Sbjct: 179 RLCELAPTEATAMIQAENYYAF-----------RWAAVGRGHHNVINFLLDCPVMLAYAE 227
Query: 582 ATGFTALHMA-----CRFHSNDNIVRKLLHHGAYYDMKD---------GKTGKTPLKHAE 627
F R + + + D G L
Sbjct: 228 IHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRN 287
Query: 628 AGKNRDIIDLL 638
D I L
Sbjct: 288 DEVLLDDIRFL 298
Score = 69.9 bits (170), Expect = 2e-13
Identities = 37/324 (11%), Positives = 80/324 (24%), Gaps = 24/324 (7%)
Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK------- 227
+ I + + + + K V +LL A N K
Sbjct: 25 ENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAH 84
Query: 228 ---VNQEPLLFFAIESNSVKIVEA--FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQM 282
+ E + F A + ++ L + + V + + A G+L ++
Sbjct: 85 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 144
Query: 283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMS 342
L + F + H HV L + I+ N +
Sbjct: 145 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 204
Query: 343 LKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGA 402
+ I L + + G+ + P + + +
Sbjct: 205 VGRGHHNV---INFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNP 261
Query: 403 NVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTS----NKP 458
+ K F L + ++ ++ LL
Sbjct: 262 DGVFDLVTK----SECLQGFYMLRNLIRRN-DEVLLDDIRFLLSIPGIKALAPTATIPGD 316
Query: 459 KQKPLAVAIQSGDFQIVKELQNYG 482
+ L +A++ G+ L +
Sbjct: 317 ANELLRLALRLGNQGACALLLSIP 340
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 90.0 bits (222), Expect = 6e-21
Identities = 46/219 (21%), Positives = 85/219 (38%), Gaps = 12/219 (5%)
Query: 102 LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPIL 161
L ++ ++ + D+ T LH AC G+ IV+FLL V K +P+
Sbjct: 16 LEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL- 74
Query: 162 AVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKAD 221
S +EI+ L+ GA V +PLH+A K + +L++ A+
Sbjct: 75 -----HIAASAGRDEIVKALLGKGAQVNAVNQN-GCTPLHYAASKNRHEIAVMLLEGGAN 128
Query: 222 TNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ 281
+ + A + L +I D + N+ LH AC ++ +
Sbjct: 129 PDAKDHYEATAMHRAAA--KGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186
Query: 282 MLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQ 320
+LV + I +N+ P+ A G + + +++
Sbjct: 187 LLVSQGASIYIENKEEKTPLQVAKG---GLGLILKRMVE 222
Score = 76.5 bits (187), Expect = 2e-16
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 8/153 (5%)
Query: 65 WDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY 124
E+ L VN Q+G T L+ A + +++ +L+ GAN + +D
Sbjct: 78 ASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA 137
Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
T +H A GN ++ LL KA + + TP+ E +L+
Sbjct: 138 TAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERV------EEAKLLVSQ 191
Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIK 217
GA++ + + +PL A +++ +++
Sbjct: 192 GASIYIENKE-EKTPLQVA-KGGLGLILKRMVE 222
Score = 67.7 bits (164), Expect = 2e-13
Identities = 43/237 (18%), Positives = 78/237 (32%), Gaps = 60/237 (25%)
Query: 434 HKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKN 493
+ +E +K +L + +++ + L A +G +IV+ L G ++ ++
Sbjct: 12 YSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGW 71
Query: 494 KEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGS 553
A R +I L + GA VN ++ +
Sbjct: 72 SPLHIAAS-----AGRDEIVKAL---------------------LGKGAQVNAVNQNGCT 105
Query: 554 ALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALH------------------------ 589
L Y A K EI +LL+ GA+ + K TA+H
Sbjct: 106 PLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQ 165
Query: 590 --------MACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
+ L+ GA +++ K KTPL+ A+ G I+ +
Sbjct: 166 DTEGNTPLHLACDEERVEEAKLLVSQGASIYIEN-KEEKTPLQVAKGG-LGLILKRM 220
Score = 66.1 bits (160), Expect = 8e-13
Identities = 42/250 (16%), Positives = 72/250 (28%), Gaps = 43/250 (17%)
Query: 356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFIS 415
+L+++ + I+ D T L +A +
Sbjct: 15 KLEELKESILADKSLATRTDQDSRTALHWACSA--------------GHTEIVEFLLQLG 60
Query: 416 DARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIV 475
+ + + E+VK LL GA VN N+ PL A +I
Sbjct: 61 VPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAV-NQNGCTPLHYAASKNRHEIA 119
Query: 476 KELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVK 535
L GA D K+ A H K I+ L
Sbjct: 120 VMLLEGGANPDA----KDHYEATAMHRAAAKGNLKMIHIL-------------------- 155
Query: 536 KNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFH 595
+ A N+ + L + E LL+ GA + ++ T L +A
Sbjct: 156 --LYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGL 213
Query: 596 SNDNIVRKLL 605
I+++++
Sbjct: 214 --GLILKRMV 221
Score = 62.7 bits (151), Expect = 1e-11
Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 37/234 (15%)
Query: 265 NSLLHKACHVGNLQIV-QMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDS 323
N ++ + G L+ + + ++ K ++ + +A G L
Sbjct: 4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63
Query: 324 INVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLL 383
+ + P + D+I+K ++ + +NA + TPL
Sbjct: 64 NDKDDAGWSP---------------LHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLH 108
Query: 384 FAAKHCDLQSAKYLIQKGANVNLT--ETQKAFISDARSSDFCFRSALQY----------- 430
+AA + A L++ GAN + A A + L Y
Sbjct: 109 YAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTE 168
Query: 431 ------ACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
+ +E KLL+ GA + NK ++ PL VA + G I+K +
Sbjct: 169 GNTPLHLACDEERVEEAKLLVSQGASIY-IENKEEKTPLQVA-KGGLGLILKRM 220
Score = 47.7 bits (112), Expect = 2e-06
Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 35/177 (19%)
Query: 555 LIYVAWKG-YEEIVDLLLDNGADVNFKSATGFTALHMACR-------------------- 593
+ +A+ G EE+ + +L + + TALH AC
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 594 ------------FHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLI 641
D IV+ LL GA + + + G TPL +A + +I +L L
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN-QNGCTPLHYAASKNRHEIAVML-LE 124
Query: 642 DNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNY 698
+ Y+ HR + K + ++ ++ +++ G T + +A
Sbjct: 125 GGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEER 181
Score = 26.9 bits (58), Expect = 8.6
Identities = 13/117 (11%), Positives = 32/117 (27%), Gaps = 1/117 (0%)
Query: 588 LHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFAS 647
+ + + +L + D + +T L A + + +I++ L +
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTD-QDSRTALHWACSAGHTEIVEFLLQLGVPVND 65
Query: 648 VTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNYAGETLIGVARKMNYSFLERL 704
+ ++ L+ + V L A K + L
Sbjct: 66 KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVML 122
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 90.2 bits (222), Expect = 2e-20
Identities = 63/302 (20%), Positives = 110/302 (36%), Gaps = 26/302 (8%)
Query: 341 MSLKDPKVMSQTQIKRL---DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL 397
M + D K Q+KR + ++ + + + + DD L A D + L
Sbjct: 1 MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRL 59
Query: 398 IQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNK 457
+++GA++N + +AL AC N + L+ + +
Sbjct: 60 LERGADINYA-------------NVDGLTALHQACIDDN--VDMVKFLVENGANINQPDN 104
Query: 458 PKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLK 517
PL A G I + L + GA + N + E + ++N
Sbjct: 105 EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGV 164
Query: 518 LNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDNGAD 576
K + ++ + G +V + G +AL A KGY E++ LL+ D
Sbjct: 165 DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224
Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
VN K G+T LH A + R L+ + + + K G+T A + DI+
Sbjct: 225 VNIKDYDGWTPLHAAAH-WGKEEACRILVENLCDMEAVN-KVGQTAFDVA----DEDILG 278
Query: 637 LL 638
L
Sbjct: 279 YL 280
Score = 75.1 bits (183), Expect = 2e-15
Identities = 47/257 (18%), Positives = 85/257 (33%), Gaps = 24/257 (9%)
Query: 89 DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
D A G + V L+ GA++N + G T LH AC N ++VKFL+ A+
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98
Query: 149 VRAKCSMMVTPIL--------------------AVSANMSEDSTDTNEIISMLIENGANV 188
+ + P+ + N D+ + E N
Sbjct: 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 189 REKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEA 248
+ + + L + K L ++++
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA-AAKGYTEVLK- 216
Query: 249 FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMG 308
L +DV+I D D + LH A H G + ++LV+ D+ A N+ A
Sbjct: 217 LLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276
Query: 309 RKHTHVAEYLLQQDSIN 325
++ E +Q+ ++
Sbjct: 277 LG--YLEELQKKQNLLH 291
Score = 68.2 bits (165), Expect = 4e-13
Identities = 26/103 (25%), Positives = 49/103 (47%)
Query: 65 WDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY 124
+R+ L++G + + G TAL++A +G +++ LLI +VN +D G+
Sbjct: 174 ERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGW 233
Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANM 167
TPLH A + G + + L+ D+ A + T ++
Sbjct: 234 TPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDI 276
Score = 59.7 bits (143), Expect = 2e-10
Identities = 54/294 (18%), Positives = 92/294 (31%), Gaps = 40/294 (13%)
Query: 189 REKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEA 248
+ K+ F D + A + V L++ AD N L I+ N +
Sbjct: 33 KTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN--VDMVK 90
Query: 249 FLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMG 308
FL +++ D + LH A G L I + L+ + + A N G
Sbjct: 91 FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE---------GDT 141
Query: 309 RKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRT 368
E + + VN + + + L + +
Sbjct: 142 PLDIAEEEAMEELLQNEVN------------RQGVDIEAARKEEERIMLRDARQWLNSGH 189
Query: 369 ENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSAL 428
N T L AA + K LIQ +VN+ + + L
Sbjct: 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDG-------------WTPL 236
Query: 429 QYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQS--GDFQIVKELQN 480
A H E ++L+ + D+ NK Q VA + G + +++ QN
Sbjct: 237 HAAA-HWGKEEACRILVENLCDMEAV-NKVGQTAFDVADEDILGYLEELQKKQN 288
Score = 48.6 bits (114), Expect = 1e-06
Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 11/158 (6%)
Query: 507 EERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEI 566
+ ++K N+ LK + ++ K ++ G+ + G E
Sbjct: 5 DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFD---------DGAVFLAACSSGDTEE 55
Query: 567 VDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
V LL+ GAD+N+ + G TALH AC ++ + K L + G PL A
Sbjct: 56 VLRLLERGADINYANVDGLTALHQAC--IDDNVDMVKFLVENGANINQPDNEGWIPLHAA 113
Query: 627 EAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMN 664
+ DI + L +V + D + E
Sbjct: 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 85.1 bits (209), Expect = 4e-19
Identities = 39/250 (15%), Positives = 79/250 (31%), Gaps = 27/250 (10%)
Query: 89 DGRTALYMAILQGLYKMVTLLIHHGAN---VNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145
DG TAL++A++ + L+ A ++ +++ G T LHLA LG + V+ L +
Sbjct: 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67
Query: 146 KADVRAKCSMMVTPI-LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP----- 199
A V T + LA + +L++ + T +
Sbjct: 68 GAGVLVAERGGHTALHLACRVRA-------HTCACVLLQPRPSHPRDASDTYLTQSQDCT 120
Query: 200 --------LHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLN 251
+ + + L A+ ++V +
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGHTPLHVAVIHKDAEMVRLLRD 179
Query: 252 SKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKH 311
+ + LH A ++++L+K D A+ P+ A+ +
Sbjct: 180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP--N 237
Query: 312 THVAEYLLQQ 321
+A L
Sbjct: 238 PILARLLRAH 247
Score = 82.4 bits (202), Expect = 4e-18
Identities = 41/263 (15%), Positives = 70/263 (26%), Gaps = 36/263 (13%)
Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHK 435
+D T L A H +L+ A + Q + ++AL A
Sbjct: 7 EDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ----------NDLGQTALHLAAILG 56
Query: 436 NNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE 495
+ KL + LA + L ++
Sbjct: 57 EASTVEKLYAAGAGVLVAERGGHTALHLA--CRVRAHTCACVLLQPRPSHPRDASDTYLT 114
Query: 496 AARIAHSTTELE------ERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSE 549
++ T + N+ + D+ + + YD +
Sbjct: 115 QSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMV 174
Query: 550 RRG----------------SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACR 593
R + L +++LLL GAD + G T L A
Sbjct: 175 RLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234
Query: 594 FHSNDNIVRKLLHHGAYYDMKDG 616
N + R L HGA + +DG
Sbjct: 235 -RPNPILARLLRAHGA-PEPEDG 255
Score = 79.7 bits (195), Expect = 4e-17
Identities = 40/259 (15%), Positives = 75/259 (28%), Gaps = 17/259 (6%)
Query: 197 FSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQ--EPLLFFAIESNSVKIVEAFLNSKN 254
+ LH AV+ ++ ++ L+ A + N + L A VE +
Sbjct: 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL-YAAG 68
Query: 255 FDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHV 314
V +++ ++ LH AC V +L++ + H
Sbjct: 69 AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128
Query: 315 AEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAE 374
A + L L+ + K + + + E
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188
Query: 375 GDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKH 434
TPL A + + L++ GA+ + R+ L A
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTAR-------------MYGGRTPLGSALLR 235
Query: 435 KNNIEMVKLLLLHGADVND 453
N + +LL HGA +
Sbjct: 236 -PNPILARLLRAHGAPEPE 253
Score = 75.1 bits (183), Expect = 1e-15
Identities = 53/239 (22%), Positives = 84/239 (35%), Gaps = 12/239 (5%)
Query: 58 TLLCSAVWDNKIREVEFLLSTG--DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGAN 115
T L AV ++FLL ++ + G+TAL++A + G V L GA
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 116 VNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILA--------VSANM 167
V + G+T LHLAC + LL + S A +
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130
Query: 168 SEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVK 227
NE + + + +PLH AV+ K+ +V LL AD N
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYD-GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189
Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
L A+E+ + ++E L D + + L A N + ++L
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLL-KAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Score = 72.0 bits (175), Expect = 1e-14
Identities = 37/287 (12%), Positives = 71/287 (24%), Gaps = 47/287 (16%)
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKAD---VRAKCSMMVTPI-LAVSANMSEDSTDTN 175
E G T LHLA ++ + FLL A + + + T + LA
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILG--------E 57
Query: 176 EIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLF 235
+ + LH A + + +L++ + + + L
Sbjct: 58 ASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP---RDASDTYLT 114
Query: 236 FAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNR 295
+ + D + + + + A+N
Sbjct: 115 QSQDCTP------------------DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156
Query: 296 YFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIK 355
P+ A+ D R L L
Sbjct: 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS---------- 206
Query: 356 RLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGA 402
+++ ++ + A TPL A + A+ L GA
Sbjct: 207 ----VLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 65.1 bits (157), Expect = 3e-12
Identities = 25/91 (27%), Positives = 36/91 (39%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
T L AV V L G + GRT L++A+ ++ LL+ GA+
Sbjct: 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
R G TPL A N + + L + A
Sbjct: 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAP 250
Score = 43.9 bits (102), Expect = 3e-05
Identities = 31/233 (13%), Positives = 70/233 (30%), Gaps = 18/233 (7%)
Query: 261 DGDLNSLLHKACHVGNLQIVQMLVKRKFD---INAQNRYFLPPMFFAIGMGRKHTHVAEY 317
D ++ LH A + + L+ ++ QN + A +G T Y
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 318 LLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDD 377
+ L V + V+ Q + + ++++ +
Sbjct: 66 AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD-TS 124
Query: 378 MITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNN 437
+ + + + + + ++ + +
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLE--------------AENYDGHTPLHVAVIHKD 170
Query: 438 IEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENY 490
EMV+LL GAD+N + PL +A+++ +++ L GA Y
Sbjct: 171 AEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223
Score = 41.2 bits (95), Expect = 2e-04
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 578 NFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKT--GKTPLKHA 626
+ + G TALH+A H ++ + LL A ++ D + G+T L A
Sbjct: 3 GYVTEDGDTALHLAVI-HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLA 52
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 84.1 bits (206), Expect = 6e-19
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 8/226 (3%)
Query: 89 DGRTALYMAILQGLYKMVTLLI----HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
DG T L++A++QG V L+ G ++ + TPLHLA ++V+ L++
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61
Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
A A T S + G E + + LH AV
Sbjct: 62 AGASPMALDRHGQTAA---HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV 118
Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
+ V+LL++ AD + + + L A+E+NS+ +V+ L +V+
Sbjct: 119 NTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ-LLLQHGANVNAQMYSG 177
Query: 265 NSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRK 310
+S LH A G L +V+ LV+ D + +N + P+ A
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVI 223
Score = 68.3 bits (165), Expect = 2e-13
Identities = 44/243 (18%), Positives = 84/243 (34%), Gaps = 32/243 (13%)
Query: 376 DDMITPLLFAAKHCDLQSAKYLI----QKGANVNLTETQKAFISDARSSDFCFRSALQYA 431
+D TPL A +L + L+ Q G +++ + ++ L A
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-------------NNLRQTPLHLA 47
Query: 432 CKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYL 491
+ L+ ++ Q +A + ++ L + A +
Sbjct: 48 VITTLPSVVRLLV--TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA 105
Query: 492 KNKEAARIAHSTTELEERKKINDLLKLNLDFLKN------------VRSNKYDEVKKNIE 539
+N + H E ++ + LL+ D V +N V+ ++
Sbjct: 106 RNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ 165
Query: 540 DGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN 599
GA VN SAL + +G +V L+ +GAD + K+ T L +A +
Sbjct: 166 HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS-RRVID 224
Query: 600 IVR 602
I+R
Sbjct: 225 ILR 227
Score = 66.8 bits (161), Expect = 5e-13
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 7/227 (3%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDH---DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA 114
T L AV + V L++ +++ +T L++A++ L +V LL+ GA
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64
Query: 115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDT 174
+ D G T HLAC + ++ LL A + ++A +T+
Sbjct: 65 SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT--LDLEARNYDGLTALHVAVNTEC 122
Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
E + +L+E GA++ + SPL AV +LS+V+LL++ A+ N + L
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN-AQMYSGSSAL 181
Query: 235 FFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQ 281
A + +V L D S+ + ++ L A + I++
Sbjct: 182 HSASGRGLLPLVR-TLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 50.2 bits (118), Expect = 2e-07
Identities = 35/249 (14%), Positives = 81/249 (32%), Gaps = 30/249 (12%)
Query: 198 SPLHFAVVKKNLSVVELLIK----CKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
+PLH AVV+ NL V L+ + ++ + Q PL I + +
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64
Query: 254 NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH 313
+ G + L + ++ + R + + + +
Sbjct: 65 SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 124
Query: 314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINA 373
+ LL++ + + IK L + +++ ++ N+NA
Sbjct: 125 TVQLLLERGADIDAVDIKSGRSPLIHAVE------------NNSLSMVQLLLQHGANVNA 172
Query: 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACK 433
+ + L A+ L + L++ GA+ +L + + L A
Sbjct: 173 QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK-------------NCHNDTPLMVARS 219
Query: 434 HKNNIEMVK 442
+ I++++
Sbjct: 220 -RRVIDILR 227
Score = 44.1 bits (102), Expect = 2e-05
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 553 SALIYVAWKGYEEIVDLLLD----NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
+ L +G V L++ G +++ + T LH+A + +
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64
Query: 609 AYYDM 613
+ +
Sbjct: 65 SPMAL 69
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 77.1 bits (188), Expect = 1e-16
Identities = 46/216 (21%), Positives = 79/216 (36%), Gaps = 11/216 (5%)
Query: 104 KMVTLLIHHGANVNDR-DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILA 162
++++ L+ GA +N D+ G T LHLA + K LL AD ++ + TP
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTP--- 59
Query: 163 VSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADT 222
+ + D + +L+ N A +PL A +VE LI AD
Sbjct: 60 ---LHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI 116
Query: 223 NLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQM 282
N + L + A +N+ + ++ N D D + L A G+ + +
Sbjct: 117 NAADNSGKTALHWAAAVNNTEAVNILLMHHANRD--AQDDKDETPLFLAAREGSYEASKA 174
Query: 283 LVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYL 318
L+ + + P A H + L
Sbjct: 175 LLDNFANREITDHMDRLPRDVASERL--HHDIVRLL 208
Score = 76.8 bits (187), Expect = 2e-16
Identities = 40/208 (19%), Positives = 80/208 (38%), Gaps = 10/208 (4%)
Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
+++ LL GA++N T +K + L +A + K L + GA + ++
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62
Query: 499 IAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIED--------GACVNVSSER 550
+ + + + + + + + IE A +N +
Sbjct: 63 AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122
Query: 551 RGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAY 610
+AL + A E V++LL + A+ + + T L +A R S + + LL + A
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYE-ASKALLDNFAN 181
Query: 611 YDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
++ D + P A + DI+ LL
Sbjct: 182 REITD-HMDRLPRDVASERLHHDIVRLL 208
Score = 62.1 bits (149), Expect = 1e-11
Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 16/224 (7%)
Query: 174 TNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPL 233
T ++IS L+ GA + M T + LH A + L+ AD N
Sbjct: 1 TAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADAN-SQDNTGRTP 59
Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
L A+ ++++ + + L ++ +++ D + L A + +V+ L+ DINA
Sbjct: 60 LHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAA 119
Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQ 353
+ + +A + + + + + P +
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETP---------------LFLAA 164
Query: 354 IKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL 397
+ + K ++D N P A++ + L
Sbjct: 165 REGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 62.1 bits (149), Expect = 2e-11
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVN 117
T L A N V L + + + T L++A +G Y+ L+ + AN
Sbjct: 125 TALHWAAAVNNTEAVNIL-LMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANRE 183
Query: 118 DRDEKGYTPLHLACYLGNKNIVKFL 142
D P +A + +IV+ L
Sbjct: 184 ITDHMDRLPRDVASERLHHDIVRLL 208
Score = 59.8 bits (143), Expect = 1e-10
Identities = 40/217 (18%), Positives = 64/217 (29%), Gaps = 21/217 (9%)
Query: 395 KYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDT 454
L+ +GA +N T D ++L A + + K LL GAD N
Sbjct: 6 SDLLAQGAELNATM------------DKTGETSLHLAARF-ARADAAKRLLDAGADANSQ 52
Query: 455 SNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKIND 514
N + A L+N ++ + A E I
Sbjct: 53 DNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITA 112
Query: 515 LLKLNL-------DFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIV 567
+N N + V + A + ++ + L A +G E
Sbjct: 113 DADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAS 172
Query: 568 DLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKL 604
LLDN A+ +A + +IVR L
Sbjct: 173 KALLDNFANREITDHMDRLPRDVASE-RLHHDIVRLL 208
Score = 51.7 bits (122), Expect = 5e-08
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 76 LSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGN 135
L T D D+N G+TAL+ A + V +L+ H AN + +D+K TPL LA G+
Sbjct: 109 LITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGS 168
Query: 136 KNIVKFLLSKKADVRAKCSMMVTPI-LAVSAN 166
K LL A+ M P +A
Sbjct: 169 YEASKALLDNFANREITDHMDRLPRDVASERL 200
Score = 51.7 bits (122), Expect = 5e-08
Identities = 42/213 (19%), Positives = 77/213 (36%), Gaps = 10/213 (4%)
Query: 72 VEFLLSTGDHDVNEKL-QDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLA 130
+ LL+ G ++N + + G T+L++A L+ GA+ N +D G TPLH A
Sbjct: 5 ISDLLAQG-AELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 131 CYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVRE 190
+ + ++ + + ++ LI A++
Sbjct: 64 VAADAMGVFQI-----LLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA 118
Query: 191 KMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFL 250
+ LH+A N V +L+ A+ + E LF A S + +A L
Sbjct: 119 ADNS-GKTALHWAAAVNNTEAVNILLMHHANRD-AQDDKDETPLFLAAREGSYEASKALL 176
Query: 251 NSKNFDVSISDGDLNSLLHKACHVGNLQIVQML 283
+ I+D A + IV++L
Sbjct: 177 -DNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 35.9 bits (81), Expect = 0.009
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 600 IVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLLH 639
++ LL GA + KTG+T L A D L
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLL 43
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 76.3 bits (186), Expect = 8e-16
Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 30/269 (11%)
Query: 72 VEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHH--------GANVNDRDEKG 123
E + + ++ + RT L+ + LI H GA+VN D
Sbjct: 17 TEPITRESVNIIDPR--HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDE 74
Query: 124 YTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIE 183
TPL LA + +V +L+ AD + + ++ ++
Sbjct: 75 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA------LHQAAANRDFGMMVYMLN 128
Query: 184 NGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNL------------IVKVNQE 231
+ + +V N ++ K
Sbjct: 129 STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR 188
Query: 232 PLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDIN 291
L +A + +++ IV+ + K + D D + + A G +++V L+++ +
Sbjct: 189 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 248
Query: 292 AQNRYFLPPMFFAIGMGRKHTHVAEYLLQ 320
A + A H ++ + +
Sbjct: 249 AVDATDHTARQLAQANN--HHNIVDIFDR 275
Score = 75.5 bits (184), Expect = 1e-15
Identities = 27/124 (21%), Positives = 48/124 (38%)
Query: 20 SSYRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTG 79
+ + E G S K T L A + + V++L+
Sbjct: 151 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK 210
Query: 80 DHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
+ +++ +DG+T + +A +G ++V LI GA+V D +T LA + NIV
Sbjct: 211 GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV 270
Query: 140 KFLL 143
Sbjct: 271 DIFD 274
Score = 70.5 bits (171), Expect = 7e-14
Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 33/297 (11%)
Query: 158 TPI-LAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELL- 215
+PI L A + I + N+ + P + + LH+ + E L
Sbjct: 2 SPIKLHTEA------AGSYAITEPITRESVNIID--PRHNRTVLHWIASNSSAEKSEDLI 53
Query: 216 -------IKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLL 268
I AD N + PL+ + + + A+L D +I + S L
Sbjct: 54 VHEAKECIAAGADVNAMDCDENTPLMLAVL--ARRRRLVAYLMKAGADPTIYNKSERSAL 111
Query: 269 HKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
H+A + ++ ++ M + + +
Sbjct: 112 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 171
Query: 329 PIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAAKH 388
D+ + Q+ + + + ++ N + + +D TP++ AA+
Sbjct: 172 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 231
Query: 389 CDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLL 445
++ YLIQ+GA+V D +A Q A + N+ +V +
Sbjct: 232 GRIEVVMYLIQQGASVEAV-------------DATDHTARQLAQAN-NHHNIVDIFD 274
Score = 65.5 bits (158), Expect = 3e-12
Identities = 44/275 (16%), Positives = 86/275 (31%), Gaps = 41/275 (14%)
Query: 358 DQIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYL--------IQKGANVNLTET 409
I + I + NI + T L + A + + ++ L I GA+VN +
Sbjct: 14 YAITEPITRESVNIIDPRHNR-TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC 72
Query: 410 QK-------------------AFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHGAD 450
+ + + + + M+ +L
Sbjct: 73 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKL 132
Query: 451 VNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERK 510
D + A+ I + N G L ++ A++ + ++ +
Sbjct: 133 KGDIEELDRNGMTALMIVA---------HNEGRDQVASAKLLVEKGAKVDYDGAARKDSE 183
Query: 511 KINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLL 570
K L+ + N E G+ + E + ++ A +G E+V L
Sbjct: 184 KYKGRTALHYAAQVS---NMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240
Query: 571 LDNGADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
+ GA V AT TA +A +++ NIV
Sbjct: 241 IQQGASVEAVDATDHTARQLAQA-NNHHNIVDIFD 274
Score = 65.1 bits (157), Expect = 3e-12
Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 41/140 (29%)
Query: 81 HDVNEKLQDGRTALYMAILQGLYKMV-TLLIHHGANVNDRDEKGYTPLHLACYLGNKNIV 139
+ + GRTAL+ A +V L+ G+N + +DE G TP+ LA G +V
Sbjct: 178 ARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVV 237
Query: 140 KFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSP 199
+L+ + A V A + T
Sbjct: 238 MYLIQQGASVEAVDATDHT----------------------------------------A 257
Query: 200 LHFAVVKKNLSVVELLIKCK 219
A + ++V++ +C+
Sbjct: 258 RQLAQANNHHNIVDIFDRCR 277
Score = 65.1 bits (157), Expect = 4e-12
Identities = 43/289 (14%), Positives = 90/289 (31%), Gaps = 47/289 (16%)
Query: 380 TPLLFAAKHCD-LQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
+P+ + + + ++ N+ R+ L + + ++
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHN--------------RTVLHWIASN-SSA 46
Query: 439 EMVKLLLLH--------GADVNDTSNK-------------------PKQKPLAVAIQSGD 471
E + L++H GADVN + I +
Sbjct: 47 EKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS 106
Query: 472 FQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKY 531
+ Y+ N + + + +
Sbjct: 107 ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLV 166
Query: 532 DEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIV-DLLLDNGADVNFKSATGFTALH 589
++ K DGA S + +G +AL Y A IV L+ + G++ + + G T +
Sbjct: 167 EKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 226
Query: 590 MACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
+A + +V L+ GA + D T T + A+A + +I+D+
Sbjct: 227 LAAQ-EGRIEVVMYLIQQGASVEAVD-ATDHTARQLAQANNHHNIVDIF 273
Score = 65.1 bits (157), Expect = 4e-12
Identities = 49/355 (13%), Positives = 103/355 (29%), Gaps = 84/355 (23%)
Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
+P+ L ++ + I +
Sbjct: 2 SPIKLHT--------------------------------------EAAGSYAITEPITRE 23
Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244
N+ + P + + LH+ + E LI +A +
Sbjct: 24 SVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKECI-------------------- 61
Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFA 304
+ DV+ D D N+ L A ++V L+K D N+ + A
Sbjct: 62 -------AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQA 114
Query: 305 IGMGRKHTHVAEYLLQQDSINVNLPIKRPNLLLDTVM-SLKDPKVMSQTQIKRLDQIIKR 363
+ Y+L + ++ N + ++ + + + + +++ K
Sbjct: 115 AANR--DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV 172
Query: 364 IIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFC 423
D ++E T L +AA+ ++ KYL+ + + D
Sbjct: 173 DYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK------------DKQDED 220
Query: 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
++ + A + IE+V L+ GA V +A + IV
Sbjct: 221 GKTPIMLAAQE-GRIEVVMYLIQQGASVEAVDAT-DHTARQLAQANNHHNIVDIF 273
Score = 58.6 bits (140), Expect = 6e-10
Identities = 42/323 (13%), Positives = 75/323 (23%), Gaps = 64/323 (19%)
Query: 92 TALYMAI-LQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKK---- 146
+ + + G Y + + N+ D T LH + + L+ +
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 147 ----ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
ADV A TP++ + F
Sbjct: 61 IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120
Query: 203 AVVKKNLSVVELLIKCKADTNLIVKVNQ-----EPLLFFAIESNSVKIVEAFLNSKNFDV 257
++ L+ +L + + E A V+
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180
Query: 258 SISDGDLNSLLHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
+ LH A V N+ IV+ LV K + + Q+ P+ A G V
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG--RIEVVM 238
Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD 376
YL+QQ + ++ A
Sbjct: 239 YLIQQGA----------------------------------------------SVEAVDA 252
Query: 377 DMITPLLFAAKHCDLQSAKYLIQ 399
T A + +
Sbjct: 253 TDHTARQLAQANNHHNIVDIFDR 275
Score = 40.5 bits (93), Expect = 4e-04
Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 11/168 (6%)
Query: 526 VRSNKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDN--------GAD 576
+ + + I VN+ R + L ++A E + L+ + GAD
Sbjct: 8 TEAAGSYAITEPITR-ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 66
Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
VN T L +A + L+ GA + + + A ++
Sbjct: 67 VNAMDCDENTPLMLAVLARRRRLV-AYLMKAGADPTIYNKSERSALHQAAANRDFGMMVY 125
Query: 637 LLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGLVHVFEIMKVVKNY 684
+L+ + I N + + K K
Sbjct: 126 MLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVD 173
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 69.1 bits (167), Expect = 9e-14
Identities = 48/232 (20%), Positives = 84/232 (36%), Gaps = 10/232 (4%)
Query: 92 TALYMAILQGLYKMVT-LLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVR 150
L+ A ++ + V LL + + +D+ G PLH + I FLLSK +V
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 151 AKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLS 210
+ +++ + + S+ K+ + LH AV KK
Sbjct: 62 LDDYPDDSGW--TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 119
Query: 211 VVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHK 270
V + LI+ A + K NQ PL S+K++E V+ D + L
Sbjct: 120 VSQFLIENGASVRIKDKFNQIPLHRA-ASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFH 178
Query: 271 ACHVGNLQIVQMLV-KRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQ 321
A G+ +LV K + + + A+ + V ++ L
Sbjct: 179 ALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL-----NEQVKKFFLNN 225
Score = 61.4 bits (147), Expect = 4e-11
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 4/128 (3%)
Query: 22 YRHHHLFSEIMFSEEDAFGYFLQGIINSSSAKSVELTLLCSAVWDNKIREVEFLLSTGDH 81
L + + + ++ + L A ++ +E L G
Sbjct: 104 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS 163
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLI-HHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
VN + + G T L+ A+ +G LL+ +GA + D KG +A N+ + K
Sbjct: 164 AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKK 220
Query: 141 FLLSKKAD 148
F L+ D
Sbjct: 221 FFLNNVVD 228
Score = 60.6 bits (145), Expect = 7e-11
Identities = 46/230 (20%), Positives = 82/230 (35%), Gaps = 5/230 (2%)
Query: 60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
L A +N+ +V+ LL + + +K QDGR L+ ++ +++ + L+ NVN
Sbjct: 4 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
D + ++ ++ D K + V+ E+
Sbjct: 64 DYPDDSG-WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122
Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIE 239
LIENGA+VR K F + PLH A +L ++ELL LF A+
Sbjct: 123 FLIENGASVRIKDKF-NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181
Query: 240 SNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFD 289
+ + + D A + Q+ + + D
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD 228
Score = 59.8 bits (143), Expect = 1e-10
Identities = 39/225 (17%), Positives = 69/225 (30%), Gaps = 18/225 (8%)
Query: 427 ALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYG---- 482
L AC N V+ LL + ++ + PL ++ +I L +
Sbjct: 3 PLHQACME-NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 483 --------AQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEV 534
+ + + V ++
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121
Query: 535 KKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG-ADVNFKSATGFTALHMACR 593
+ IE+GA V + + L A G ++++LL G + VN++ G+T L A
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181
Query: 594 FHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIIDLL 638
D V + +GA YD+ D G A N +
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVA---LNEQVKKFF 222
Score = 57.9 bits (138), Expect = 6e-10
Identities = 35/242 (14%), Positives = 63/242 (26%), Gaps = 42/242 (17%)
Query: 234 LFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQ 293
L A N V+ L+SK + D D LH + +I L+ + ++N
Sbjct: 4 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63
Query: 294 NRYFLPPMFFAIGMGRKHTHVAEYL------------------LQQDSINVNLPIKRPNL 335
+ +
Sbjct: 64 DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 123
Query: 336 LLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTEN------INAEGDDMITPLLFAAKHC 389
L++ S++ +Q + R + + +N + TPL A
Sbjct: 124 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 183
Query: 390 DLQSAKYLIQK-GANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVKLLLLHG 448
+A L++K GA +L D A A ++ K L +
Sbjct: 184 HGDAAVLLVEKYGAEYDLV-------------DNKGAKAEDVALNE----QVKKFFLNNV 226
Query: 449 AD 450
D
Sbjct: 227 VD 228
Score = 56.0 bits (133), Expect = 2e-09
Identities = 30/244 (12%), Positives = 66/244 (27%), Gaps = 32/244 (13%)
Query: 380 TPLLFAAKHCDLQSAKYLI-QKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNI 438
PL A + + L+ K + + D R L ++
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLL-------------QKDQDGRIPLHWSVSF-QAH 47
Query: 439 EMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAAR 498
E+ LL +VN I + Y + + +
Sbjct: 48 EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 107
Query: 499 IAHSTTELEERKKINDLLKLNLDF------------LKNVRSNKYDEVKKNIEDGACVNV 546
H + + L++ + + VN
Sbjct: 108 CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW 167
Query: 547 SSERRGSALIYVAWKGYEEIVDLLLDN-GADVNFKSATGFTALHMACRFHSNDNIVRKLL 605
++ + L + +G+ + LL++ GA+ + G A +A N+ + + L
Sbjct: 168 QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL----NEQVKKFFL 223
Query: 606 HHGA 609
++
Sbjct: 224 NNVV 227
Score = 48.3 bits (113), Expect = 1e-06
Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 16/231 (6%)
Query: 265 NSLLHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGR--------KHTHVA 315
N LH+AC VQ L+ K + +++ P+ +++
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 316 EYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEG 375
D ++ V+ + + K +Q + + E
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120
Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDF--CFRSALQYACK 433
+ + + D + L + + +L + + ++ +
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 180
Query: 434 HKNNIEMVKLLLL-HGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
+ + + LL+ +GA+ + NK K VA+ Q+ K N
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNK-GAKAEDVALNE---QVKKFFLNNVV 227
Score = 35.2 bits (79), Expect = 0.019
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 586 TALHMACRFHSNDNIVRKLL-HHGAYYDMKDGKTGKTPLKHA 626
LH AC + V++LL + KD + G+ PL +
Sbjct: 2 YPLHQACM-ENEFFKVQELLHSKPSLLLQKD-QDGRIPLHWS 41
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 66.5 bits (160), Expect = 6e-13
Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 6/205 (2%)
Query: 89 DGRTALYMAILQG----LYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
DG + L++AI+ +++ + A +N ++ TPLHLA N+ + L
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI-TNQPEIAEALL 59
Query: 145 KKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAV 204
L ++ ++ S + ++ + + + LH A
Sbjct: 60 GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 119
Query: 205 VKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDL 264
+ L +VELL+ AD N N L A++ + +V L DV+
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLK-CGADVNRVTYQG 178
Query: 265 NSLLHKACHVGNLQIVQMLVKRKFD 289
S + +I Q L + +
Sbjct: 179 YSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 65.3 bits (157), Expect = 2e-12
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 61 CSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRD 120
A + VE L+S G ++ +GRTAL++A+ +V+LL+ GA+VN
Sbjct: 116 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 175
Query: 121 EKGYTPLHLACYLGNKNIVKFLLSKKAD 148
+GY+P L + I + L +
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 61.1 bits (146), Expect = 5e-11
Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 8/210 (3%)
Query: 123 GYTPLHLACYLGNKN----IVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEII 178
G + LHLA K +++ + A + + ++ TP+ A ++ ++
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLH--LAVITNQPEIAEALL 59
Query: 179 SMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAI 238
+ + + + N L A
Sbjct: 60 GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 119
Query: 239 ESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFL 298
+ IVE ++ + + + LH A + N +V +L+K D+N
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 179
Query: 299 PPMFFAIGMGRKHTHVAEYLLQQDSINVNL 328
P G T + + L Q N+ +
Sbjct: 180 SPYQLTWGRP--STRIQQQLGQLTLENLQM 207
Score = 59.9 bits (143), Expect = 1e-10
Identities = 37/202 (18%), Positives = 66/202 (32%), Gaps = 19/202 (9%)
Query: 425 RSALQYACKHKN---NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNY 481
S L A H+ +E+++ + A +N N +Q PL +A+ + +I + L
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 482 GAQIDKENYL-------------KNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRS 528
G + ++ TT +
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121
Query: 529 NKYDEVKKNIEDGACVNVSSERRG-SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTA 587
V+ + GA VN G +AL ++V LLL GADVN + G++
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP 181
Query: 588 LHMACRFHSNDNIVRKLLHHGA 609
+ + I ++L
Sbjct: 182 YQLTWG-RPSTRIQQQLGQLTL 202
Score = 54.5 bits (129), Expect = 7e-09
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 4/197 (2%)
Query: 58 TLLCSAVWDNKIREVEFLLSTGDH---DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGA 114
+ L A+ + ++ +N + +T L++A++ ++ L+ G
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63
Query: 115 NVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDT 174
+ RD +G TPLHLAC G V L + T +
Sbjct: 64 DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123
Query: 175 NEIISMLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLL 234
I+ +L+ GA+V + P + LH AV +N +V LL+KC AD N + P
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP-Y 182
Query: 235 FFAIESNSVKIVEAFLN 251
S +I +
Sbjct: 183 QLTWGRPSTRIQQQLGQ 199
Score = 52.6 bits (124), Expect = 3e-08
Identities = 46/239 (19%), Positives = 75/239 (31%), Gaps = 29/239 (12%)
Query: 261 DGDLNSLLHKACHVGNLQIVQMLVK----RKFDINAQNRYFLPPMFFAIGMGRKHTHVAE 316
DG +S LH A + +++ +N QN P+ A+ + A
Sbjct: 1 DG--DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 58
Query: 317 YLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGD 376
D + P L L V++Q+ I + +
Sbjct: 59 LGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY--------- 109
Query: 377 DMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKN 436
+ T L A+ H L + L+ GA+VN R+AL
Sbjct: 110 NGHTCLHLASIHGYLGIVELLVSLGADVN------------AQEPCNGRTALHL-AVDLQ 156
Query: 437 NIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKE 495
N ++V LLL GADVN P + +I ++L + + E
Sbjct: 157 NPDLVSLLLKCGADVNRV-TYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDE 214
Score = 43.3 bits (100), Expect = 3e-05
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Query: 553 SALIYVAWKGY----EEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
S L E++ + + A +NF++ T LH+A + + L
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63
Query: 609 AYYDM 613
Sbjct: 64 DPELR 68
Score = 39.1 bits (89), Expect = 8e-04
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 584 GFTALHMACRFHSND---NIVRKLLHHGAYYDMKDGKTGKTPLKHA 626
G + LH+A ++R++ A+ + ++ +TPL A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN-NLQQTPLHLA 46
Score = 36.8 bits (83), Expect = 0.005
Identities = 32/218 (14%), Positives = 62/218 (28%), Gaps = 34/218 (15%)
Query: 359 QIIKRIIDRTENINAEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDAR 418
++I+++ +N + + TPL A + A+ L+ G + L + +
Sbjct: 20 EVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA 79
Query: 419 SSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKEL 478
C S + +N L +A G IV+ L
Sbjct: 80 CEQGCLASVGVLTQSCTTPHLH---------SILKATNYNGHTCLHLASIHGYLGIVELL 130
Query: 479 QNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNI 538
+ GA ++ + + A +A D V +
Sbjct: 131 VSLGADVNAQEPCNGRTALHLAV-------------------------DLQNPDLVSLLL 165
Query: 539 EDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD 576
+ GA VN + + S + I L +
Sbjct: 166 KCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 34.9 bits (78), Expect = 0.024
Identities = 22/210 (10%), Positives = 55/210 (26%), Gaps = 14/210 (6%)
Query: 198 SPLHFAVVKKNLSVVELLIK----CKADTNLIVKVNQEPLLFFAIESNSVKIVEAFLNSK 253
S LH A++ + ++ +I+ A N + Q PL I +
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63
Query: 254 NFDVSISDGDLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH 313
+ ++ G+ L V +++ + + + H +
Sbjct: 64 DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123
Query: 314 VAEYLLQQDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINA 373
+ L + N + ++ D + ++ ++N
Sbjct: 124 LGIVELLVSLGADVNAQEPCN---------GRTALHLAVDLQNPDLVS-LLLKCGADVNR 173
Query: 374 EGDDMITPLLFAAKHCDLQSAKYLIQKGAN 403
+P + + L Q
Sbjct: 174 VTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 60.8 bits (146), Expect = 2e-11
Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 17/150 (11%)
Query: 92 TALYMAILQGLYKMVTLLIHHGANVN------DRDEKGYTPLHLACYLGNKN---IVKFL 142
+L A+ + G ++ + E T LHLA ++ IV FL
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 143 LSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHF 202
+ ++ + T + E + +L+ A+ E + +PL
Sbjct: 68 VQNSGNLDKQTGKGSTALHYCCLTD------NAECLKLLLRGKAS-IEIANESGETPLDI 120
Query: 203 AVVKKNLSVVELLIKCKAD-TNLIVKVNQE 231
A K+ ELL + + N V V E
Sbjct: 121 AKRLKHEHCEELLTQALSGRFNSHVHVEYE 150
Score = 53.4 bits (127), Expect = 5e-09
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 43/134 (32%)
Query: 57 LTLLCSAVWDNKIREVEFLLSTGDHDVNEKL------QDGRTALYMAIL---QGLYKMVT 107
L LC AV I + + G D+ EK+ + TAL++A+ + +V
Sbjct: 7 LHSLCEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVD 65
Query: 108 LLIHHGANVNDR---------------------------------DEKGYTPLHLACYLG 134
L+ + N++ + +E G TPL +A L
Sbjct: 66 FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLK 125
Query: 135 NKNIVKFLLSKKAD 148
+++ + L +
Sbjct: 126 HEHCEELLTQALSG 139
Score = 47.3 bits (111), Expect = 8e-07
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 526 VRSNKYDEVKKNIEDGACVNVS------SERRGSALIYVAW---KGYEEIVDLLLDNGAD 576
V++ + + DG + E +AL + IVD L+ N +
Sbjct: 14 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN 73
Query: 577 VNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNRDIID 636
++ ++ G TA C N ++ LL A ++ + ++G+TPL A+ K+ +
Sbjct: 74 LDKQTGKGSTA-LHYCCLTDNAECLKLLLRGKASIEIAN-ESGETPLDIAKRLKHEHCEE 131
Query: 637 LL 638
LL
Sbjct: 132 LL 133
Score = 46.5 bits (109), Expect = 1e-06
Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 36/162 (22%)
Query: 425 RSALQYACK--HKNNIEMVKLLLLHGADVN-----DTSNKPKQKPLAVAIQSGD---FQI 474
+ L C+ +I + G D+ ++P + L +A++S D I
Sbjct: 4 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63
Query: 475 VKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEV 534
V L +DK+ + + + + +
Sbjct: 64 VDFLVQNSGNLDKQTGKGSTALHYCCLT--------------------------DNAECL 97
Query: 535 KKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGAD 576
K + A + +++E + L +E +LL +
Sbjct: 98 KLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 139
Score = 41.1 bits (95), Expect = 9e-05
Identities = 16/145 (11%), Positives = 40/145 (27%), Gaps = 41/145 (28%)
Query: 373 AEGDDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYAC 432
A+ + L A K D+ G ++ + +AL A
Sbjct: 1 ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEK-------IPLANGHEPDETALHLAV 53
Query: 433 K--HKNNIEMVKLLLLHGADV--------------------------------NDTSNKP 458
+ + ++ +V L+ + ++ + +N+
Sbjct: 54 RSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANES 113
Query: 459 KQKPLAVAIQSGDFQIVKELQNYGA 483
+ PL +A + + L +
Sbjct: 114 GETPLDIAKRLKHEHCEELLTQALS 138
Score = 39.2 bits (90), Expect = 5e-04
Identities = 17/118 (14%), Positives = 46/118 (38%), Gaps = 10/118 (8%)
Query: 176 EIISMLIENGANVREKMPFTDF-----SPLHFAVV---KKNLSVVELLIKCKADTNLIVK 227
+ +G ++ EK+P + + LH AV + +L +V+ L++ + +
Sbjct: 20 FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG 79
Query: 228 VNQEPLLFFAIESNSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVK 285
L + + N+ + + +++ G + L A + + ++L +
Sbjct: 80 KGSTALHYCCLTDNAECLKLLLRGKASIEIANESG--ETPLDIAKRLKHEHCEELLTQ 135
Score = 38.8 bits (89), Expect = 5e-04
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 18/154 (11%)
Query: 456 NKPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDL 515
K L A+++ D + + G + ++ L N T L
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHE----PDETALHL------- 51
Query: 516 LKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNGA 575
+++V V +++ ++ + + +AL Y E + LLL A
Sbjct: 52 ------AVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 105
Query: 576 DVNFKSATGFTALHMACRFHSNDNIVRKLLHHGA 609
+ + +G T L +A R +++ L +
Sbjct: 106 SIEIANESGETPLDIAKR-LKHEHCEELLTQALS 138
Score = 37.6 bits (86), Expect = 0.001
Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 20/143 (13%)
Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFL-------PPMFFAIGMGRKHTHVAEYLLQ 320
L +A ++ + D+ + + R H+ ++L
Sbjct: 10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL-V 68
Query: 321 QDSINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMIT 380
Q+S N++ + + + + + +K ++ +I + T
Sbjct: 69 QNSGNLDKQTGKGS------------TALHYCCLTDNAECLKLLLRGKASIEIANESGET 116
Query: 381 PLLFAAKHCDLQSAKYLIQKGAN 403
PL A + + L Q +
Sbjct: 117 PLDIAKRLKHEHCEELLTQALSG 139
Score = 31.9 bits (71), Expect = 0.12
Identities = 19/126 (15%), Positives = 35/126 (27%), Gaps = 26/126 (20%)
Query: 354 IKRLDQIIKRIIDRTENINAEG--DDMITPLLFAAKHCD---LQSAKYLIQKGANVNLTE 408
I L Q +D TE I + T L A + D L +L+Q N++
Sbjct: 19 IFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQT 78
Query: 409 TQKAFISDARSSDFCF--------------------RSALQYACKHKNNIEMVKLLLLHG 448
+ + + L A + + +LL
Sbjct: 79 GKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL-KHEHCEELLTQAL 137
Query: 449 ADVNDT 454
+ ++
Sbjct: 138 SGRFNS 143
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 51.4 bits (121), Expect = 3e-08
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKF 141
DVN K TAL+ A ++V LLI +GA+V+ + + T ++ GN+++ +
Sbjct: 92 DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151
Query: 142 L 142
L
Sbjct: 152 L 152
Score = 49.1 bits (115), Expect = 2e-07
Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 10/159 (6%)
Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
L A G + V+ L++ A + + + + + ++
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGT--------SPLHLAAQYGHFSTTEVLLR 55
Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244
R+ D +PLH A + + ++VE+L+K AD N + L +A E N +
Sbjct: 56 AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTA-LHWATEHNHQE 114
Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQML 283
+VE DV + + GN + ++L
Sbjct: 115 VVELL-IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 47.2 bits (110), Expect = 8e-07
Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 461 KPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNL 520
K L A ++G V+ L GA + + + E + +
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 521 DFLKNVRSNKYDE------VKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
+ + V+ ++ GA VN + +AL + ++E+V+LL+ G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKL 604
ADV+ +S TA ++ + N+++ L
Sbjct: 124 ADVHTQSKFCKTAFDISID-NGNEDLAEIL 152
Score = 46.8 bits (109), Expect = 9e-07
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 9/159 (5%)
Query: 89 DGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKAD 148
D L A G V +L+ +GA D G +PLHLA G+ + + LL
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59
Query: 149 VRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN 208
A+ + TP S I+ +L+++GA+ + LH+A +
Sbjct: 60 RDARTKVDRTP------LHMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNH 112
Query: 209 LSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVKIVE 247
VVELLIK AD + K + +I++ + + E
Sbjct: 113 QEVVELLIKYGADVHTQSKFCKTA-FDISIDNGNEDLAE 150
Score = 43.7 bits (101), Expect = 1e-05
Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 30/182 (16%)
Query: 263 DLNSLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQD 322
DL L +A G V++L+ P A T V
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60
Query: 323 SINVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPL 382
+ D + + I++ ++ ++NA+ +T L
Sbjct: 61 DA----------------RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTAL 104
Query: 383 LFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFRSALQYACKHKNNIEMVK 442
+A +H + + LI+ GA+V+ ++A + + N ++ +
Sbjct: 105 HWATEHNHQEVVELLIKYGADVHTQ-------------SKFCKTAFDISIDN-GNEDLAE 150
Query: 443 LL 444
+L
Sbjct: 151 IL 152
Score = 38.3 bits (87), Expect = 0.001
Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 4/147 (2%)
Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
G L+ A G ++ V +L+ NGA G + LH+A ++ L +
Sbjct: 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61
Query: 612 DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGL 671
+ +E N + L H D + + + L
Sbjct: 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE---L 118
Query: 672 VHVFEIMKVVKNYAGETLIGVARKMNY 698
+ + ++ +T ++
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGN 145
Score = 32.9 bits (73), Expect = 0.051
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLL 109
L A N VE LL DV+ + + +TA ++I G + +L
Sbjct: 104 LHWATEHNHQEVVE-LLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 50.6 bits (119), Expect = 5e-08
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 81 HDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVK 140
DVN G +++A+ +G +V+ L ++++ RD +G TPL LA G +++V
Sbjct: 92 ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVD 150
Query: 141 FLLS 144
L
Sbjct: 151 ILQG 154
Score = 40.6 bits (93), Expect = 1e-04
Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 9/153 (5%)
Query: 462 PLAVAIQSGDFQIVKEL-QNYGAQIDKEN------YLKNKEAARIAHSTTELEERKKIND 514
L+ A GD Q V+ L D N + +
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64
Query: 515 LLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
R+ D +K +E GA VNV + +G+ +V L
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE- 123
Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHH 607
+D++ + A G T L +A + ++V L H
Sbjct: 124 SDLHRRDARGLTPLELALQ-RGAQDLVDILQGH 155
Score = 40.2 bits (92), Expect = 2e-04
Identities = 15/151 (9%), Positives = 39/151 (25%), Gaps = 6/151 (3%)
Query: 427 ALQYACKHKNNIEMVKLLLL-HGADVNDTSNK----PKQKPLAVAIQSGDFQIVKELQNY 481
L A +++ V+ LL + + + + + N
Sbjct: 5 RLSGAAAR-GDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63
Query: 482 GAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKNIEDG 541
+ +E +N + + V +
Sbjct: 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123
Query: 542 ACVNVSSERRGSALIYVAWKGYEEIVDLLLD 572
+ ++ R + L +G +++VD+L
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 37.5 bits (85), Expect = 0.002
Identities = 16/164 (9%), Positives = 40/164 (24%), Gaps = 12/164 (7%)
Query: 122 KGYTPLHLACYLGNKNIVKFLLSKK-ADVRAKCSMMVTPILAVSANMSEDSTDTNEIISM 180
+ L A G+ V+ LL ++ A T + + + + + + +
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60
Query: 181 LIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIES 240
+ + + + + + L +
Sbjct: 61 PNVQDTSGTSPVHDAARTGFLDTL-----------KVLVEHGADVNVPDGTGALPIHLAV 109
Query: 241 NSVKIVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLV 284
+ D+ D + L A G +V +L
Sbjct: 110 QEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 37.1 bits (84), Expect = 0.002
Identities = 16/149 (10%), Positives = 39/149 (26%), Gaps = 17/149 (11%)
Query: 268 LHKACHVGNLQIVQMLVKRK-FDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
L A G++Q V+ L+ R+ +A NR+ + + ++
Sbjct: 6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65
Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQ----------------TQIKRLDQIIKRIIDRTEN 370
+ T ++ ++ + + +
Sbjct: 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESD 125
Query: 371 INAEGDDMITPLLFAAKHCDLQSAKYLIQ 399
++ +TPL A + L
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 36.3 bits (82), Expect = 0.004
Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 9/157 (5%)
Query: 60 LCSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDR 119
L A ++EV LL + + G+TAL + + + LL +
Sbjct: 6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65
Query: 120 DEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIIS 179
A + + + + LAV + +
Sbjct: 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESD 125
Query: 180 MLIENGANVREKMPFTDFSPLHFAVVKKNLSVVELLI 216
+ + +PL A+ + +V++L
Sbjct: 126 LHRRDARG---------LTPLELALQRGAQDLVDILQ 153
Score = 35.2 bits (79), Expect = 0.010
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 82 DVNEKLQDGRTALYMAILQGLYKMVTLLIHH 112
D++ + G T L +A+ +G +V +L H
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 34.4 bits (77), Expect = 0.017
Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Query: 550 RRGSALIYVAWKGYEEIVDLLLD-NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
R G L A +G + V LL + + G TAL + + +
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60
Query: 609 AYYDM 613
Sbjct: 61 PNVQD 65
Score = 34.0 bits (76), Expect = 0.022
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 573 NGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKNR 632
+GADVN TG +H+A + + + +D G TPL+ A +
Sbjct: 90 HGADVNVPDGTGALPIHLAVQEGHTAVVSFL--AAESDLHRRD-ARGLTPLELALQRGAQ 146
Query: 633 DIIDLL--HL 640
D++D+L H+
Sbjct: 147 DLVDILQGHM 156
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 50.3 bits (118), Expect = 6e-08
Identities = 20/157 (12%), Positives = 44/157 (28%), Gaps = 7/157 (4%)
Query: 424 FRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKELQNYGA 483
+ + L A ++E + LL + +VN + + + + + + L+
Sbjct: 1 WGNELASAAAR-GDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANP 59
Query: 484 Q------IDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLDFLKNVRSNKYDEVKKN 537
+ + E + I D L +
Sbjct: 60 DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 119
Query: 538 IEDGACVNVSSERRGSALIYVAWKGYEEIVDLLLDNG 574
+ V + + +A G E+V L+ NG
Sbjct: 120 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 48.3 bits (113), Expect = 4e-07
Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 3/147 (2%)
Query: 552 GSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHGAYY 611
G+ L A +G E + LL N +VN ++ G + + + L
Sbjct: 2 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGR---TALQVMKLGNPEIARRLLLRGAN 58
Query: 612 DMKDGKTGKTPLKHAEAGKNRDIIDLLHLIDNLFASVTNPYDPNVYHRIELMNSAKQLGL 671
+TG + A D + L N + ++ + + L
Sbjct: 59 PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118
Query: 672 VHVFEIMKVVKNYAGETLIGVARKMNY 698
V +N+ G+T +AR
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGR 145
Score = 48.0 bits (112), Expect = 4e-07
Identities = 14/154 (9%), Positives = 36/154 (23%), Gaps = 18/154 (11%)
Query: 266 SLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSIN 325
+ L A G+L+ + L++ ++NAQN + + + +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 326 VNLPIKRPNLLLDTVMSLKDPKVMS------------------QTQIKRLDQIIKRIIDR 367
+ ++ + L + +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 368 TENINAEGDDMITPLLFAAKHCDLQSAKYLIQKG 401
N+ T A + + + G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 45.6 bits (106), Expect = 3e-06
Identities = 16/162 (9%), Positives = 38/162 (23%), Gaps = 9/162 (5%)
Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISMLIEN 184
L A G+ + LL +V A+ +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFG---------RTALQVMKLGNPEIARRLL 53
Query: 185 GANVREKMPFTDFSPLHFAVVKKNLSVVELLIKCKADTNLIVKVNQEPLLFFAIESNSVK 244
+ + + + I L A + ++
Sbjct: 54 LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 113
Query: 245 IVEAFLNSKNFDVSISDGDLNSLLHKACHVGNLQIVQMLVKR 286
+VE + +V + ++ A G ++V ++
Sbjct: 114 VVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 44.5 bits (103), Expect = 8e-06
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSK 145
H +NV R+ KG T LA G +V + +
Sbjct: 121 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 43.7 bits (101), Expect = 1e-05
Identities = 20/152 (13%), Positives = 38/152 (25%), Gaps = 26/152 (17%)
Query: 92 TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
L A +G + +T L+ + NVN ++ G T L + + + LL
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 152 KCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDF-------------- 197
+ A A + E + + +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 198 ------------SPLHFAVVKKNLSVVELLIK 217
+ A + VV L+
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 154
Score = 38.3 bits (87), Expect = 0.001
Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 8/154 (5%)
Query: 462 PLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKLNLD 521
LA A GD + + L ++ +N + E+ R + D
Sbjct: 4 ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKD 63
Query: 522 FLKNVRSNKYDEVKKNIEDGACVN-------VSSERRGSALIYVAWKGYEEIVDLLLDNG 574
+ + +E + + L+
Sbjct: 64 RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 123
Query: 575 ADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
++V ++ G TA +A + + +V + +G
Sbjct: 124 SNVGHRNHKGDTACDLARL-YGRNEVVSLMQANG 156
Score = 36.0 bits (81), Expect = 0.006
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 61 CSAVWDNKIREVEFLLSTGDHDVNEKLQDGRTALYMAILQGLYKMVTLLIHHG 113
A + +R VEFL+ +V + G TA +A L G ++V+L+ +G
Sbjct: 104 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 34.5 bits (77), Expect = 0.019
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVN 405
L AA DL+ L+Q NVN
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVN 28
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 49.7 bits (117), Expect = 7e-08
Identities = 15/127 (11%), Positives = 35/127 (27%), Gaps = 21/127 (16%)
Query: 380 TPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFISDARSSDFCFR-------------- 425
LL ++ + + +I + + +L +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 426 -----SALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKP--LAVAIQSGDFQIVKEL 478
+ NN+++ K L+ GA V + Q ++ G Q + L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 479 QNYGAQI 485
++
Sbjct: 123 YGVQEKM 129
Score = 45.4 bits (106), Expect = 2e-06
Identities = 18/128 (14%), Positives = 32/128 (25%), Gaps = 35/128 (27%)
Query: 57 LTLLCSAVWDNKIREVEFLLSTG--------------------------------DHDVN 84
L LL + + + V+ ++ +VN
Sbjct: 2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61
Query: 85 EKLQDGRTALYMAILQGLYKMVTLLIHHGANVNDRDEKGY---TPLHLACYLGNKNIVKF 141
DG T L+ A ++ L+ GA V G +F
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121
Query: 142 LLSKKADV 149
L + +
Sbjct: 122 LYGVQEKM 129
Score = 42.4 bits (98), Expect = 3e-05
Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 8/131 (6%)
Query: 92 TALYMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRA 151
L + L+G + +V +I+ + + +++G T LH A G+ IVKF V+
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKF------LVQF 56
Query: 152 KCSMMVTPILAVSANMSEDSTDTNEIISMLIENGANVREKMPFTDFSPLHFAVVKKN--L 209
++ + S + ++ L+E+GA V + +
Sbjct: 57 GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 116
Query: 210 SVVELLIKCKA 220
+ L +
Sbjct: 117 QCSQFLYGVQE 127
Score = 41.2 bits (95), Expect = 7e-05
Identities = 14/142 (9%), Positives = 36/142 (25%), Gaps = 18/142 (12%)
Query: 266 SLLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSIN 325
+LL + G +VQ ++ D + N + + A+ G +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 326 VNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMI---TPL 382
+ Q+ K +++ + A +
Sbjct: 63 ---------------ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADK 107
Query: 383 LFAAKHCDLQSAKYLIQKGANV 404
+ Q +++L +
Sbjct: 108 CEEMEEGYTQCSQFLYGVQEKM 129
Score = 39.7 bits (91), Expect = 2e-04
Identities = 16/120 (13%), Positives = 32/120 (26%), Gaps = 34/120 (28%)
Query: 553 SALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDN------------- 599
+ L+ + +G ++V ++ D + + G TALH A +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 600 -------------------IVRKLLHHGAYYDMKDGKTGKTPLKHAEAGKN--RDIIDLL 638
+ + L+ GA +T E + L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Score = 37.7 bits (86), Expect = 0.001
Identities = 16/129 (12%), Positives = 33/129 (25%), Gaps = 13/129 (10%)
Query: 462 PLAV---AIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIAHSTTELEERKKINDLLKL 518
PLA+ + G+F +V+ + N + + + + +
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 519 NLDFLKNVRSNKYDEVKKN-------IEDGACVNVSSERRG---SALIYVAWKGYEEIVD 568
N N +E GA V + + +GY +
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 120
Query: 569 LLLDNGADV 577
L +
Sbjct: 121 FLYGVQEKM 129
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 39.9 bits (91), Expect = 1e-04
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 111 HHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLS 144
GA ++ RD G P+ LA LG++++ ++L +
Sbjct: 90 RAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 39.6 bits (90), Expect = 2e-04
Identities = 16/122 (13%), Positives = 25/122 (20%), Gaps = 26/122 (21%)
Query: 121 EKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSMMVTPILAVSANMSEDSTDTNEIISM 180
E L A G V+ LL A+ A S PI + + + +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 181 LIENGANVREKMPFTDF--------------------------SPLHFAVVKKNLSVVEL 214
+ P+ A + V
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 215 LI 216
L
Sbjct: 121 LR 122
Score = 36.9 bits (83), Expect = 0.002
Identities = 15/133 (11%), Positives = 37/133 (27%), Gaps = 15/133 (11%)
Query: 267 LLHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTHVAEYLLQQDSINV 326
L A G ++ V+ L++ + NA N Y P+ + + + + +
Sbjct: 6 WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA- 64
Query: 327 NLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTENINAEGDDMITPLLFAA 386
+ + + + + ++ P+ A
Sbjct: 65 --------------DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 110
Query: 387 KHCDLQSAKYLIQ 399
+ A+YL
Sbjct: 111 ELGHRDVARYLRA 123
Score = 35.7 bits (80), Expect = 0.004
Identities = 20/121 (16%), Positives = 33/121 (27%), Gaps = 31/121 (25%)
Query: 549 ERRGSALIYVAWKGYEEIVDLLLDNGADVNFKSATGFTALHMACRFHSNDNIVRKLLHHG 608
E L A +G E V LL+ GA+ N ++ G + + + + L
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 609 AYYDMKD-------------------------------GKTGKTPLKHAEAGKNRDIIDL 637
G+ P+ AE +RD+
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 638 L 638
L
Sbjct: 121 L 121
Score = 34.5 bits (77), Expect = 0.012
Identities = 19/123 (15%), Positives = 32/123 (26%), Gaps = 7/123 (5%)
Query: 457 KPKQKPLAVAIQSGDFQIVKELQNYGAQIDKENYLKNKEAARIA-------HSTTELEER 509
+P LA A G + V+ L GA + N + +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 510 KKINDLLKLNLDFLKNVRSNKYDEVKKNIEDGACVNVSSERRGSALIYVAWKGYEEIVDL 569
D L R D + GA ++V + G+ ++
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 570 LLD 572
L
Sbjct: 121 LRA 123
Score = 32.6 bits (72), Expect = 0.056
Identities = 14/123 (11%), Positives = 33/123 (26%), Gaps = 18/123 (14%)
Query: 376 DDMITPLLFAAKHCDLQSAKYLIQKGANVNLTETQKAFI------------------SDA 417
+ L AA ++ + L++ GAN N +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 418 RSSDFCFRSALQYACKHKNNIEMVKLLLLHGADVNDTSNKPKQKPLAVAIQSGDFQIVKE 477
+ + ++L D + + P+ +A + G + +
Sbjct: 61 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 120
Query: 478 LQN 480
L+
Sbjct: 121 LRA 123
Score = 26.5 bits (56), Expect = 6.0
Identities = 5/30 (16%), Positives = 11/30 (36%)
Query: 81 HDVNEKLQDGRTALYMAILQGLYKMVTLLI 110
++ + GR + +A G + L
Sbjct: 93 ARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 31.4 bits (69), Expect = 0.14
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 125 TPLHLACYLGNKNIVKFLLSKKADVRAKCSMM 156
A G+ + VK ++K DV
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGG 35
Score = 28.3 bits (61), Expect = 1.6
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 380 TPLLFAAKHCDLQSAKYLIQK 400
++A K+ DL K + K
Sbjct: 4 KEFMWALKNGDLDEVKDYVAK 24
Score = 27.6 bits (59), Expect = 2.5
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 4/49 (8%)
Query: 95 YMAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLL 143
A+ +G V LL+ GA+ + G T L + +K LL
Sbjct: 73 LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT----DNQAIKALL 117
Score = 26.0 bits (55), Expect = 9.3
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 268 LHKACHVGNLQIVQMLVKRKFDINAQNRYFLPPMFFAIGMGRKHTH 313
A G+L V+ V + D+N P+ +A G+
Sbjct: 6 FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEIL 51
>d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein
{Prosthecochloris aestuarii, strain 2k [TaxId: 1102]}
Length = 359
Score = 29.2 bits (65), Expect = 1.9
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 325 NVNLPIKRPNLLLDTVMSLKDPKVMSQTQIKRLDQIIKRIIDRTEN-INAEGD 376
VN+P P L D + + + +Q + R I+ ++D +N +N E D
Sbjct: 27 KVNVPAAIPLLPTDCNIRIDAKPLDAQKGVVRFTTKIESVVDSVKNTLNVEVD 79
>d2ivya1 d.58.58.1 (A:2-89) Hypothetical protein SSO1404 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 88
Score = 26.3 bits (58), Expect = 3.4
Identities = 5/31 (16%), Positives = 17/31 (54%)
Query: 349 MSQTQIKRLDQIIKRIIDRTENINAEGDDMI 379
++ +++K ++ +K I +R + E ++
Sbjct: 40 LNSSRLKDVEAGLKIIGNRKKLQEDERFFIL 70
>d1px5a1 a.160.1.2 (A:201-346) 2'-5'-oligoadenylate synthetase 1,
OAS1, second domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 146
Score = 26.8 bits (59), Expect = 5.4
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 54 SVELTLLCSAVWDNKIREVEFLLSTGDHDVNEKLQD 89
L LL W+ R+ +F + G V E +
Sbjct: 29 QYALELLTVYAWEQGSRKTDFSTAQGFQTVLELVLK 64
>d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 27.3 bits (59), Expect = 7.4
Identities = 9/110 (8%), Positives = 28/110 (25%), Gaps = 5/110 (4%)
Query: 96 MAILQGLYKMVTLLIHHGANVNDRDEKGYTPLHLACYLGNKNIVKFLLSKKADVRAKCSM 155
+ G + + +HH + D + ++ V + + + ++ S
Sbjct: 100 QFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSY 159
Query: 156 ----MVTPILAVSANMSEDSTDTNEIISMLI-ENGANVREKMPFTDFSPL 200
+ A + + + + P + L
Sbjct: 160 QLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSL 209
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.381
Gapped
Lambda K H
0.267 0.0578 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,538,796
Number of extensions: 119101
Number of successful extensions: 951
Number of sequences better than 10.0: 1
Number of HSP's gapped: 564
Number of HSP's successfully gapped: 198
Length of query: 710
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 618
Effective length of database: 1,144,436
Effective search space: 707261448
Effective search space used: 707261448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.7 bits)