Query psy15069
Match_columns 461
No_of_seqs 226 out of 1871
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 19:38:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15069.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15069hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2504|consensus 100.0 3.9E-46 8.4E-51 370.9 29.4 423 1-451 59-485 (509)
2 COG2271 UhpC Sugar phosphate p 100.0 2E-42 4.2E-47 321.5 24.9 386 4-449 45-440 (448)
3 TIGR00892 2A0113 monocarboxyla 100.0 7E-41 1.5E-45 335.1 32.8 382 4-440 35-418 (455)
4 PRK09556 uhpT sugar phosphate 100.0 5.6E-39 1.2E-43 323.0 27.7 381 5-443 46-449 (467)
5 PRK09705 cynX putative cyanate 100.0 5.4E-38 1.2E-42 308.8 26.1 353 5-443 26-381 (393)
6 PRK11663 regulatory protein Uh 100.0 7.3E-38 1.6E-42 312.0 26.2 378 5-442 40-423 (434)
7 COG2814 AraJ Arabinose efflux 100.0 1.7E-37 3.7E-42 292.9 27.0 354 9-447 34-390 (394)
8 TIGR00890 2A0111 Oxalate/Forma 100.0 4.5E-38 9.7E-43 307.5 20.8 357 2-436 17-375 (377)
9 PRK03545 putative arabinose tr 100.0 1.5E-36 3.2E-41 298.7 27.6 347 9-442 30-379 (390)
10 TIGR00893 2A0114 d-galactonate 100.0 2.9E-36 6.2E-41 296.5 26.6 378 5-440 11-396 (399)
11 TIGR00903 2A0129 major facilit 100.0 1E-36 2.3E-41 295.6 22.5 353 4-440 7-362 (368)
12 PRK11551 putative 3-hydroxyphe 100.0 3E-36 6.5E-41 298.3 24.8 363 5-442 32-395 (406)
13 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.6E-36 3.4E-41 300.1 22.3 377 5-432 25-410 (412)
14 PRK11273 glpT sn-glycerol-3-ph 100.0 2.4E-35 5.3E-40 295.4 25.8 381 6-446 47-438 (452)
15 PRK03699 putative transporter; 100.0 1.8E-35 3.8E-40 291.4 24.2 365 4-453 23-390 (394)
16 PRK10213 nepI ribonucleoside t 100.0 2.8E-34 6E-39 282.4 27.5 344 9-438 41-386 (394)
17 PRK10091 MFS transport protein 100.0 3.6E-34 7.7E-39 280.9 27.5 353 6-444 21-377 (382)
18 PLN00028 nitrate transmembrane 100.0 5E-35 1.1E-39 294.3 20.8 366 5-444 53-434 (476)
19 TIGR00881 2A0104 phosphoglycer 100.0 1.1E-34 2.3E-39 283.9 21.6 362 4-424 11-378 (379)
20 TIGR00894 2A0114euk Na(+)-depe 100.0 5.2E-35 1.1E-39 294.5 17.5 366 17-444 70-451 (465)
21 PRK10642 proline/glycine betai 100.0 4.8E-34 1E-38 288.7 23.6 375 6-447 34-434 (490)
22 PRK10489 enterobactin exporter 100.0 3.3E-33 7.1E-38 277.5 27.3 359 8-446 37-403 (417)
23 TIGR00712 glpT glycerol-3-phos 100.0 2.2E-33 4.7E-38 280.3 24.7 381 6-446 45-436 (438)
24 PRK12307 putative sialic acid 100.0 6.2E-34 1.3E-38 283.6 20.1 347 7-424 37-389 (426)
25 TIGR00896 CynX cyanate transpo 100.0 2.6E-33 5.5E-38 272.3 22.4 336 4-423 16-354 (355)
26 TIGR00897 2A0118 polyol permea 100.0 1E-32 2.3E-37 272.3 26.6 356 10-443 35-401 (402)
27 TIGR00891 2A0112 putative sial 100.0 1.7E-33 3.8E-38 278.1 20.5 367 6-428 30-401 (405)
28 PRK11646 multidrug resistance 100.0 8.4E-33 1.8E-37 272.4 25.0 349 7-438 30-383 (400)
29 PRK15402 multidrug efflux syst 100.0 1.7E-32 3.8E-37 271.3 26.2 338 7-423 32-376 (406)
30 TIGR01299 synapt_SV2 synaptic 100.0 2.1E-33 4.5E-38 290.1 20.1 416 7-445 186-736 (742)
31 TIGR00900 2A0121 H+ Antiporter 100.0 7.8E-33 1.7E-37 269.4 22.4 338 8-419 19-365 (365)
32 PRK10406 alpha-ketoglutarate t 100.0 1.4E-32 3.1E-37 273.9 24.4 354 6-442 40-423 (432)
33 PRK05122 major facilitator sup 100.0 2.5E-32 5.3E-37 269.7 25.8 344 10-444 37-390 (399)
34 PRK15034 nitrate/nitrite trans 100.0 1.2E-32 2.6E-37 269.2 22.6 351 6-443 52-454 (462)
35 TIGR00899 2A0120 sugar efflux 100.0 2.7E-32 5.8E-37 267.0 25.2 345 13-441 23-372 (375)
36 PRK14995 methyl viologen resis 100.0 6.1E-33 1.3E-37 280.9 21.2 374 7-416 25-412 (495)
37 PRK09874 drug efflux system pr 100.0 6.6E-32 1.4E-36 267.4 26.6 353 7-441 33-396 (408)
38 KOG2532|consensus 100.0 1.8E-33 3.9E-38 276.9 14.4 375 15-451 65-455 (466)
39 PRK10504 putative transporter; 100.0 2.5E-32 5.4E-37 275.6 22.4 383 6-419 28-417 (471)
40 TIGR00902 2A0127 phenyl propri 100.0 1.2E-31 2.6E-36 262.9 25.8 345 9-438 25-374 (382)
41 PRK09952 shikimate transporter 100.0 1E-31 2.3E-36 267.8 25.5 361 7-444 41-434 (438)
42 PRK12382 putative transporter; 100.0 1.3E-31 2.8E-36 263.9 25.1 341 10-441 37-387 (392)
43 PRK03633 putative MFS family t 100.0 5E-32 1.1E-36 265.7 21.4 343 7-439 25-368 (381)
44 KOG3764|consensus 100.0 8.2E-33 1.8E-37 254.2 14.6 350 15-445 98-456 (464)
45 PRK15403 multidrug efflux syst 100.0 6.3E-31 1.4E-35 260.1 28.8 348 7-433 35-387 (413)
46 PRK03893 putative sialic acid 100.0 6.8E-32 1.5E-36 274.2 22.4 380 7-436 39-446 (496)
47 TIGR00710 efflux_Bcr_CflA drug 100.0 7.4E-31 1.6E-35 257.7 27.9 331 6-416 23-360 (385)
48 PF07690 MFS_1: Major Facilita 100.0 1.3E-32 2.7E-37 266.7 14.5 333 7-408 15-352 (352)
49 PRK11043 putative transporter; 100.0 5.7E-31 1.2E-35 260.1 25.9 329 8-418 26-358 (401)
50 COG2223 NarK Nitrate/nitrite t 100.0 6.5E-32 1.4E-36 252.0 17.9 356 7-446 33-404 (417)
51 TIGR00711 efflux_EmrB drug res 100.0 1E-31 2.2E-36 272.1 19.5 377 7-417 21-410 (485)
52 cd06174 MFS The Major Facilita 100.0 1.1E-30 2.4E-35 252.6 24.6 332 5-440 16-349 (352)
53 TIGR00879 SP MFS transporter, 100.0 2E-32 4.3E-37 276.3 12.9 397 7-442 47-469 (481)
54 PRK10054 putative transporter; 100.0 2.8E-31 6E-36 261.2 19.7 346 10-439 30-380 (395)
55 TIGR00895 2A0115 benzoate tran 100.0 2E-31 4.4E-36 262.5 18.7 361 6-414 35-397 (398)
56 PRK10473 multidrug efflux syst 100.0 2.5E-30 5.5E-35 254.7 26.0 345 6-436 21-367 (392)
57 PRK10077 xylE D-xylose transpo 100.0 2.4E-31 5.1E-36 269.1 19.0 381 8-443 32-457 (479)
58 PRK15075 citrate-proton sympor 100.0 9.3E-31 2E-35 261.0 22.8 335 6-420 33-397 (434)
59 TIGR00898 2A0119 cation transp 100.0 7.5E-32 1.6E-36 274.5 14.1 389 1-444 102-496 (505)
60 PRK11102 bicyclomycin/multidru 100.0 4E-30 8.7E-35 251.9 25.5 332 6-413 9-345 (377)
61 COG2807 CynX Cyanate permease 100.0 5.3E-30 1.1E-34 234.0 24.0 353 5-441 29-383 (395)
62 PRK11128 putative 3-phenylprop 100.0 8.8E-30 1.9E-34 249.8 27.3 342 9-435 25-371 (382)
63 TIGR00885 fucP L-fucose:H+ sym 100.0 4.3E-30 9.2E-35 253.3 24.1 343 8-433 23-402 (410)
64 PRK15011 sugar efflux transpor 100.0 1.1E-29 2.4E-34 250.0 26.3 347 10-442 38-390 (393)
65 TIGR00883 2A0106 metabolite-pr 100.0 1.4E-30 3E-35 256.1 19.7 351 5-433 10-391 (394)
66 PRK10133 L-fucose transporter; 100.0 6.9E-30 1.5E-34 254.1 23.1 348 7-434 45-424 (438)
67 PRK11195 lysophospholipid tran 100.0 4.5E-29 9.8E-34 245.3 27.7 355 8-443 23-380 (393)
68 PRK11652 emrD multidrug resist 100.0 2.5E-29 5.5E-34 247.7 26.0 330 7-417 27-360 (394)
69 PRK09528 lacY galactoside perm 100.0 1.1E-29 2.5E-34 252.3 22.1 358 9-442 32-402 (420)
70 TIGR00887 2A0109 phosphate:H+ 100.0 5.8E-30 1.3E-34 259.8 20.4 392 8-446 36-492 (502)
71 PTZ00207 hypothetical protein; 100.0 2.1E-29 4.6E-34 252.9 22.8 433 2-442 41-551 (591)
72 TIGR00886 2A0108 nitrite extru 100.0 9.2E-30 2E-34 248.3 19.7 332 5-404 18-366 (366)
73 PRK11010 ampG muropeptide tran 100.0 1.6E-28 3.4E-33 247.7 26.1 357 9-444 33-404 (491)
74 TIGR00889 2A0110 nucleoside tr 100.0 1.4E-28 3E-33 243.5 23.6 352 8-443 23-402 (418)
75 KOG1330|consensus 100.0 1.7E-29 3.7E-34 237.5 11.0 345 10-422 55-417 (493)
76 PRK11902 ampG muropeptide tran 100.0 2.4E-27 5.1E-32 234.2 26.2 351 9-442 20-389 (402)
77 PRK06814 acylglycerophosphoeth 100.0 5.4E-28 1.2E-32 268.8 23.9 341 23-438 52-417 (1140)
78 KOG2533|consensus 100.0 2.3E-28 5.1E-33 241.1 17.9 360 14-431 72-444 (495)
79 TIGR00882 2A0105 oligosacchari 100.0 1.6E-27 3.5E-32 235.1 21.3 354 10-439 24-391 (396)
80 TIGR00901 2A0125 AmpG-related 100.0 1.1E-26 2.5E-31 225.7 24.2 316 7-401 7-355 (356)
81 PRK08633 2-acyl-glycerophospho 100.0 1.8E-26 3.9E-31 257.3 27.4 355 10-436 32-403 (1146)
82 PF05977 MFS_3: Transmembrane 100.0 2.4E-26 5.3E-31 230.3 24.7 356 9-442 31-393 (524)
83 TIGR00792 gph sugar (Glycoside 99.9 9.1E-27 2E-31 232.8 21.2 332 10-419 22-382 (437)
84 COG0738 FucP Fucose permease [ 99.9 1.1E-26 2.4E-31 215.5 19.9 333 6-420 31-387 (422)
85 TIGR00924 yjdL_sub1_fam amino 99.9 1.3E-25 2.7E-30 225.5 27.5 409 9-444 31-469 (475)
86 TIGR00806 rfc RFC reduced fola 99.9 1.1E-25 2.4E-30 216.0 23.5 387 5-437 43-442 (511)
87 TIGR02718 sider_RhtX_FptX side 99.9 4.6E-25 9.9E-30 217.1 24.7 348 9-438 22-386 (390)
88 TIGR00805 oat sodium-independe 99.9 6.6E-26 1.4E-30 233.8 18.8 281 7-341 52-408 (633)
89 PRK10207 dipeptide/tripeptide 99.9 2.1E-24 4.6E-29 216.8 26.8 406 9-444 36-477 (489)
90 PRK09584 tppB putative tripept 99.9 2E-23 4.4E-28 210.8 27.6 399 11-444 45-480 (500)
91 KOG0569|consensus 99.9 5.9E-24 1.3E-28 207.2 18.7 393 14-448 45-460 (485)
92 PRK09669 putative symporter Ya 99.9 2.4E-23 5.2E-28 208.3 22.2 330 10-419 32-390 (444)
93 KOG2615|consensus 99.9 3.9E-23 8.5E-28 189.5 19.4 339 23-425 68-422 (451)
94 PF00083 Sugar_tr: Sugar (and 99.9 1.6E-27 3.4E-32 239.3 -14.7 380 24-450 47-444 (451)
95 PF11700 ATG22: Vacuole efflux 99.9 9.5E-22 2.1E-26 195.2 25.9 355 25-447 72-472 (477)
96 KOG4686|consensus 99.9 9E-24 1.9E-28 185.7 9.6 365 9-448 65-448 (459)
97 PF03825 Nuc_H_symport: Nucleo 99.9 6.6E-22 1.4E-26 192.8 23.1 353 9-440 23-392 (400)
98 PF01306 LacY_symp: LacY proto 99.9 1.4E-21 3E-26 187.2 22.5 354 11-442 30-399 (412)
99 KOG0254|consensus 99.9 1.9E-22 4.1E-27 205.1 17.2 377 24-449 90-490 (513)
100 KOG0252|consensus 99.9 1.9E-22 4.1E-27 189.3 13.1 382 20-451 81-506 (538)
101 KOG0255|consensus 99.9 6.5E-22 1.4E-26 202.1 16.3 382 15-446 110-496 (521)
102 PRK10429 melibiose:sodium symp 99.9 3.5E-21 7.5E-26 194.0 21.1 336 11-419 30-395 (473)
103 KOG0253|consensus 99.9 5E-22 1.1E-26 181.0 11.8 407 8-447 98-523 (528)
104 TIGR00788 fbt folate/biopterin 99.9 3.4E-21 7.4E-26 193.0 19.1 362 10-434 48-434 (468)
105 PRK09848 glucuronide transport 99.9 8E-21 1.7E-25 190.4 21.6 329 10-419 31-390 (448)
106 TIGR01272 gluP glucose/galacto 99.9 1.2E-20 2.5E-25 179.0 20.3 276 72-429 6-301 (310)
107 TIGR01301 GPH_sucrose GPH fami 99.9 1.6E-20 3.6E-25 185.3 20.0 368 10-442 26-470 (477)
108 PF13347 MFS_2: MFS/sugar tran 99.9 8.5E-21 1.8E-25 189.0 18.2 331 10-419 24-386 (428)
109 PF06609 TRI12: Fungal trichot 99.9 8.9E-21 1.9E-25 189.7 17.2 376 8-415 64-465 (599)
110 PRK15462 dipeptide/tripeptide 99.8 3.4E-19 7.3E-24 176.7 24.3 398 5-435 26-469 (493)
111 PRK11462 putative transporter; 99.8 6.1E-19 1.3E-23 176.6 26.1 329 11-419 33-389 (460)
112 COG2270 Permeases of the major 99.8 3.2E-19 6.8E-24 167.3 19.3 350 23-444 58-430 (438)
113 COG2211 MelB Na+/melibiose sym 99.8 2.3E-18 4.9E-23 166.6 16.1 330 14-419 39-398 (467)
114 KOG2563|consensus 99.7 8.1E-18 1.8E-22 158.6 11.0 371 6-450 63-458 (480)
115 PF03209 PUCC: PUCC protein; 99.7 3.6E-15 7.8E-20 140.7 24.9 353 14-440 6-395 (403)
116 COG3104 PTR2 Dipeptide/tripept 99.7 1.2E-14 2.5E-19 139.8 26.3 404 9-448 43-492 (498)
117 PF03137 OATP: Organic Anion T 99.7 5.7E-18 1.2E-22 170.7 0.1 360 9-418 24-515 (539)
118 COG2271 UhpC Sugar phosphate p 99.7 2.1E-16 4.6E-21 148.2 9.9 180 262-444 26-207 (448)
119 COG2814 AraJ Arabinose efflux 99.7 1.7E-15 3.6E-20 144.0 14.9 175 265-442 13-187 (394)
120 TIGR01299 synapt_SV2 synaptic 99.7 4E-15 8.7E-20 154.7 18.6 164 282-447 184-359 (742)
121 KOG1330|consensus 99.6 2.3E-16 5.1E-21 149.3 7.7 183 264-448 32-214 (493)
122 PRK11663 regulatory protein Uh 99.6 2.8E-15 6.1E-20 149.6 14.8 173 263-438 21-193 (434)
123 KOG3626|consensus 99.6 1.6E-14 3.5E-19 145.8 19.6 269 10-333 119-462 (735)
124 PRK10054 putative transporter; 99.6 4.7E-15 1E-19 146.0 14.9 172 265-440 7-179 (395)
125 PRK10091 MFS transport protein 99.6 1.3E-14 2.8E-19 142.4 15.2 172 265-439 3-174 (382)
126 TIGR00900 2A0121 H+ Antiporter 99.6 5.3E-15 1.2E-19 143.8 11.8 172 268-442 2-178 (365)
127 TIGR00891 2A0112 putative sial 99.6 1.3E-14 2.7E-19 143.4 14.3 177 265-443 12-189 (405)
128 TIGR00924 yjdL_sub1_fam amino 99.6 4.9E-15 1.1E-19 149.0 11.4 179 262-443 6-192 (475)
129 PRK10213 nepI ribonucleoside t 99.6 2E-14 4.3E-19 141.5 15.4 158 277-437 32-189 (394)
130 PRK03545 putative arabinose tr 99.6 2.3E-14 5E-19 141.1 14.9 171 267-440 11-181 (390)
131 TIGR00710 efflux_Bcr_CflA drug 99.6 1.1E-14 2.4E-19 142.9 12.5 171 268-441 8-178 (385)
132 TIGR02332 HpaX 4-hydroxyphenyl 99.6 1.2E-14 2.7E-19 143.9 12.7 173 265-439 8-185 (412)
133 PF07690 MFS_1: Major Facilita 99.6 8.9E-15 1.9E-19 141.5 11.1 165 271-438 2-167 (352)
134 PRK10504 putative transporter; 99.6 2E-14 4.4E-19 145.2 14.0 173 265-440 10-182 (471)
135 TIGR00893 2A0114 d-galactonate 99.6 6.5E-15 1.4E-19 144.6 9.6 163 276-441 5-167 (399)
136 PF03092 BT1: BT1 family; Int 99.6 2.1E-14 4.6E-19 142.2 13.2 388 2-455 2-425 (433)
137 PRK14995 methyl viologen resis 99.6 3.2E-14 6.9E-19 144.4 14.2 173 266-441 7-180 (495)
138 PRK03699 putative transporter; 99.6 2.8E-14 6E-19 140.7 13.4 173 266-440 8-180 (394)
139 PRK10489 enterobactin exporter 99.6 6.5E-15 1.4E-19 146.3 8.6 179 262-443 14-197 (417)
140 TIGR00711 efflux_EmrB drug res 99.6 3.5E-14 7.7E-19 143.9 14.1 173 267-442 4-176 (485)
141 PRK12307 putative sialic acid 99.6 5.5E-14 1.2E-18 140.0 14.9 163 265-430 18-180 (426)
142 PRK11646 multidrug resistance 99.6 4.6E-14 9.9E-19 139.3 13.8 168 268-439 13-181 (400)
143 PRK09584 tppB putative tripept 99.6 3.8E-14 8.2E-19 143.5 13.3 183 257-442 12-200 (500)
144 PRK11551 putative 3-hydroxyphe 99.5 7.4E-14 1.6E-18 138.2 14.9 171 267-440 17-187 (406)
145 TIGR00890 2A0111 Oxalate/Forma 99.5 4.7E-14 1E-18 137.7 12.6 167 272-442 10-176 (377)
146 PRK10473 multidrug efflux syst 99.5 9.4E-14 2E-18 136.8 13.8 169 270-441 8-176 (392)
147 PRK11195 lysophospholipid tran 99.5 7.7E-14 1.7E-18 137.3 12.4 173 264-443 2-174 (393)
148 KOG2816|consensus 99.5 2.3E-13 4.9E-18 134.1 15.6 321 33-421 72-396 (463)
149 PRK09874 drug efflux system pr 99.5 1.3E-13 2.9E-18 136.4 14.1 175 264-442 13-192 (408)
150 PRK10207 dipeptide/tripeptide 99.5 7.7E-14 1.7E-18 140.5 12.5 175 265-442 14-193 (489)
151 TIGR00899 2A0120 sugar efflux 99.5 1.2E-13 2.5E-18 135.2 13.2 169 271-441 3-174 (375)
152 PRK09556 uhpT sugar phosphate 99.5 6.3E-14 1.4E-18 141.2 10.9 174 267-442 31-211 (467)
153 PRK15402 multidrug efflux syst 99.5 1.5E-13 3.3E-18 136.0 13.5 160 278-440 26-185 (406)
154 PRK05122 major facilitator sup 99.5 6.8E-14 1.5E-18 138.2 10.9 168 264-434 14-190 (399)
155 PRK11102 bicyclomycin/multidru 99.5 1.4E-13 2.9E-18 134.9 12.4 157 281-440 7-163 (377)
156 PRK09705 cynX putative cyanate 99.5 2.6E-13 5.7E-18 133.6 14.5 153 282-437 26-178 (393)
157 TIGR00881 2A0104 phosphoglycer 99.5 2.3E-14 4.9E-19 140.0 6.3 165 274-441 4-169 (379)
158 PRK11043 putative transporter; 99.5 2.9E-13 6.3E-18 133.8 14.3 166 275-443 16-181 (401)
159 TIGR00895 2A0115 benzoate tran 99.5 8.4E-14 1.8E-18 137.0 10.3 166 270-438 22-187 (398)
160 PRK12382 putative transporter; 99.5 2.3E-13 5.1E-18 134.0 13.4 166 263-431 13-187 (392)
161 PRK03893 putative sialic acid 99.5 2.9E-13 6.4E-18 137.6 14.4 164 266-432 21-184 (496)
162 PLN00028 nitrate transmembrane 99.5 3.8E-13 8.2E-18 135.7 15.0 167 274-443 45-219 (476)
163 PRK15462 dipeptide/tripeptide 99.5 1.9E-13 4.1E-18 136.0 12.4 173 266-441 10-187 (493)
164 TIGR00712 glpT glycerol-3-phos 99.5 2.7E-13 5.8E-18 135.6 13.4 175 263-440 25-203 (438)
165 TIGR00886 2A0108 nitrite extru 99.5 3E-13 6.5E-18 131.8 13.4 170 266-438 2-183 (366)
166 PRK11652 emrD multidrug resist 99.5 4E-13 8.7E-18 132.4 14.3 168 268-438 11-178 (394)
167 PF06813 Nodulin-like: Nodulin 99.5 1.4E-13 3.1E-18 124.0 10.0 163 2-167 16-186 (250)
168 KOG2325|consensus 99.5 2.1E-13 4.6E-18 132.6 11.7 354 17-441 65-473 (488)
169 PRK15403 multidrug efflux syst 99.5 3.8E-13 8.2E-18 133.3 13.8 163 274-439 25-187 (413)
170 TIGR00903 2A0129 major facilit 99.5 2.2E-13 4.7E-18 132.5 11.7 157 281-441 7-163 (368)
171 TIGR00902 2A0127 phenyl propri 99.5 2.3E-13 5E-18 133.5 11.6 163 267-433 6-169 (382)
172 TIGR00897 2A0118 polyol permea 99.5 6.2E-13 1.3E-17 131.4 14.8 164 265-431 13-181 (402)
173 PRK03633 putative MFS family t 99.5 5E-13 1.1E-17 131.1 13.8 153 264-418 5-157 (381)
174 TIGR00880 2_A_01_02 Multidrug 99.5 6.4E-14 1.4E-18 116.2 5.6 135 29-164 4-139 (141)
175 cd06174 MFS The Major Facilita 99.5 6.7E-13 1.4E-17 128.1 13.5 172 268-442 2-173 (352)
176 PRK09528 lacY galactoside perm 99.5 2.7E-13 5.8E-18 134.9 10.7 180 260-443 5-191 (420)
177 KOG3764|consensus 99.5 3E-13 6.4E-18 125.8 9.9 150 293-445 99-249 (464)
178 TIGR00894 2A0114euk Na(+)-depe 99.4 1.3E-13 2.8E-18 139.0 8.0 149 294-444 70-220 (465)
179 TIGR00892 2A0113 monocarboxyla 99.4 1E-12 2.3E-17 131.8 14.4 158 282-443 36-194 (455)
180 PRK11902 ampG muropeptide tran 99.4 8.8E-13 1.9E-17 130.4 12.9 170 271-443 5-182 (402)
181 PRK11128 putative 3-phenylprop 99.4 5E-13 1.1E-17 131.2 10.9 160 274-438 13-174 (382)
182 TIGR00806 rfc RFC reduced fola 99.4 2.1E-12 4.5E-17 125.1 14.6 161 283-447 44-207 (511)
183 TIGR00882 2A0105 oligosacchari 99.4 1.3E-12 2.9E-17 128.8 13.3 175 264-442 1-182 (396)
184 PRK15011 sugar efflux transpor 99.4 2.2E-12 4.7E-17 127.1 14.8 175 264-441 14-192 (393)
185 PF01770 Folate_carrier: Reduc 99.4 4.5E-11 9.7E-16 114.5 22.5 360 9-410 25-395 (412)
186 PF05631 DUF791: Protein of un 99.4 8.8E-12 1.9E-16 116.1 17.3 236 13-326 59-304 (354)
187 PF05977 MFS_3: Transmembrane 99.4 3.4E-12 7.3E-17 128.6 15.2 182 260-442 5-189 (524)
188 PRK11273 glpT sn-glycerol-3-ph 99.4 1.5E-12 3.3E-17 130.6 12.8 153 283-439 47-204 (452)
189 PRK11010 ampG muropeptide tran 99.4 3.6E-12 7.8E-17 129.0 13.9 179 262-443 9-195 (491)
190 TIGR00879 SP MFS transporter, 99.4 2.1E-12 4.6E-17 130.2 12.1 165 276-443 39-217 (481)
191 TIGR00889 2A0110 nucleoside tr 99.4 2.5E-12 5.4E-17 127.6 11.5 157 9-166 229-405 (418)
192 TIGR00885 fucP L-fucose:H+ sym 99.4 5.2E-12 1.1E-16 124.8 13.5 172 266-439 4-203 (410)
193 PRK10077 xylE D-xylose transpo 99.4 5.8E-12 1.3E-16 127.5 14.2 175 268-445 15-217 (479)
194 PRK15034 nitrate/nitrite trans 99.4 8.1E-12 1.8E-16 123.0 14.6 176 264-442 33-231 (462)
195 PRK10642 proline/glycine betai 99.4 1.1E-11 2.3E-16 125.9 15.1 169 267-438 18-208 (490)
196 PRK10406 alpha-ketoglutarate t 99.3 1.1E-11 2.3E-16 123.8 13.4 165 269-436 26-212 (432)
197 KOG4332|consensus 99.3 1.1E-10 2.3E-15 103.0 17.5 342 15-440 64-428 (454)
198 TIGR00887 2A0109 phosphate:H+ 99.3 1E-11 2.3E-16 126.3 13.2 177 269-447 20-229 (502)
199 PRK06814 acylglycerophosphoeth 99.3 6.3E-12 1.4E-16 140.5 11.3 182 261-443 7-195 (1140)
200 TIGR00898 2A0119 cation transp 99.3 3.9E-12 8.5E-17 129.7 8.9 153 286-444 110-265 (505)
201 TIGR00901 2A0125 AmpG-related 99.3 1.7E-11 3.8E-16 119.0 12.8 156 283-441 6-176 (356)
202 TIGR00896 CynX cyanate transpo 99.3 1.3E-11 2.8E-16 119.9 11.5 152 280-435 15-167 (355)
203 PRK09952 shikimate transporter 99.3 4.3E-11 9.3E-16 119.6 14.6 165 266-434 23-211 (438)
204 TIGR00805 oat sodium-independe 99.3 1.7E-12 3.7E-17 134.5 4.5 170 274-445 42-283 (633)
205 PRK10133 L-fucose transporter; 99.3 3.5E-11 7.7E-16 120.0 13.6 147 266-414 27-176 (438)
206 PRK15075 citrate-proton sympor 99.3 4.8E-11 1E-15 119.2 14.5 162 266-430 16-199 (434)
207 KOG2532|consensus 99.3 1.2E-11 2.6E-16 122.5 8.3 149 294-444 67-217 (466)
208 TIGR00880 2_A_01_02 Multidrug 99.2 2.1E-11 4.6E-16 100.9 8.3 132 307-441 5-136 (141)
209 PRK08633 2-acyl-glycerophospho 99.2 5E-11 1.1E-15 133.6 13.7 157 261-417 5-165 (1146)
210 PF02487 CLN3: CLN3 protein; 99.2 1.8E-09 3.9E-14 103.5 21.8 324 25-411 61-391 (402)
211 TIGR01301 GPH_sucrose GPH fami 99.2 1E-10 2.2E-15 116.0 13.1 175 267-442 6-217 (477)
212 PTZ00207 hypothetical protein; 99.2 1E-10 2.2E-15 118.5 13.1 156 281-442 43-204 (591)
213 KOG2615|consensus 99.2 7.2E-11 1.6E-15 109.5 9.9 129 297-428 65-196 (451)
214 PF01306 LacY_symp: LacY proto 99.2 2.3E-11 4.9E-16 117.2 6.6 175 262-440 4-185 (412)
215 PF06609 TRI12: Fungal trichot 99.2 4.3E-10 9.4E-15 113.4 15.0 179 260-443 35-217 (599)
216 TIGR02718 sider_RhtX_FptX side 99.2 6.1E-10 1.3E-14 109.6 14.5 176 267-443 3-184 (390)
217 COG3104 PTR2 Dipeptide/tripept 99.1 8.3E-11 1.8E-15 113.6 6.6 187 261-450 16-213 (498)
218 KOG3762|consensus 99.1 1.2E-09 2.5E-14 105.9 14.4 186 260-448 366-552 (618)
219 PF03825 Nuc_H_symport: Nucleo 99.1 4.2E-10 9.2E-15 110.1 10.6 174 270-446 7-183 (400)
220 COG2223 NarK Nitrate/nitrite t 99.1 3.7E-10 8.1E-15 106.7 8.7 175 266-444 15-194 (417)
221 TIGR00792 gph sugar (Glycoside 99.1 3.3E-10 7.1E-15 113.3 8.8 163 277-440 11-191 (437)
222 KOG3098|consensus 99.1 2.1E-08 4.6E-13 97.8 20.3 311 29-412 56-409 (461)
223 PF06963 FPN1: Ferroportin1 (F 99.1 2.7E-08 5.8E-13 97.2 20.8 327 33-410 48-411 (432)
224 TIGR00883 2A0106 metabolite-pr 99.0 1.5E-09 3.3E-14 106.4 12.2 126 311-439 46-187 (394)
225 KOG2504|consensus 99.0 7.3E-10 1.6E-14 111.3 9.8 173 268-444 45-222 (509)
226 KOG0255|consensus 99.0 5.7E-10 1.2E-14 114.2 9.1 147 293-445 111-257 (521)
227 KOG2533|consensus 99.0 6.4E-10 1.4E-14 110.7 8.5 147 293-441 74-225 (495)
228 COG0738 FucP Fucose permease [ 99.0 4.4E-09 9.5E-14 99.0 11.6 175 267-443 15-210 (422)
229 TIGR01272 gluP glucose/galacto 99.0 1.1E-09 2.4E-14 103.9 7.3 143 6-151 158-303 (310)
230 KOG0254|consensus 98.9 2.3E-08 5E-13 102.0 14.5 143 301-446 90-233 (513)
231 PRK09669 putative symporter Ya 98.9 7.8E-09 1.7E-13 103.6 10.2 170 270-440 14-201 (444)
232 TIGR00788 fbt folate/biopterin 98.9 1.2E-08 2.6E-13 102.7 11.2 177 265-445 26-211 (468)
233 COG2807 CynX Cyanate permease 98.9 4.2E-08 9.1E-13 91.1 13.1 158 281-442 28-185 (395)
234 PF13347 MFS_2: MFS/sugar tran 98.8 6E-09 1.3E-13 103.9 7.7 170 275-445 11-200 (428)
235 PF11700 ATG22: Vacuole efflux 98.8 1E-08 2.2E-13 102.4 8.7 161 1-162 295-467 (477)
236 PRK10429 melibiose:sodium symp 98.8 2.9E-08 6.2E-13 100.3 11.4 171 269-440 10-198 (473)
237 PF00083 Sugar_tr: Sugar (and 98.8 1.4E-10 3.1E-15 116.4 -6.4 145 300-446 46-195 (451)
238 KOG0569|consensus 98.8 6.7E-08 1.4E-12 95.3 12.2 147 302-448 62-210 (485)
239 KOG3810|consensus 98.7 4.9E-07 1.1E-11 83.2 15.9 348 34-439 53-417 (433)
240 COG2270 Permeases of the major 98.7 6.1E-08 1.3E-12 92.0 10.2 157 1-158 266-424 (438)
241 PRK11462 putative transporter; 98.7 9.4E-08 2E-12 96.1 11.6 171 270-441 14-202 (460)
242 KOG2325|consensus 98.7 3E-07 6.5E-12 90.1 14.1 176 265-442 34-228 (488)
243 KOG0252|consensus 98.6 1.7E-08 3.7E-13 96.2 3.3 186 262-449 35-252 (538)
244 KOG0637|consensus 98.6 1.1E-07 2.5E-12 90.7 8.9 365 10-434 54-487 (498)
245 PF06813 Nodulin-like: Nodulin 98.6 7.7E-07 1.7E-11 80.5 12.2 163 277-445 14-184 (250)
246 COG0477 ProP Permeases of the 98.5 5.9E-07 1.3E-11 84.3 10.3 145 9-154 23-176 (338)
247 TIGR00926 2A1704 Peptide:H+ sy 98.5 3.6E-06 7.9E-11 87.2 16.7 154 9-163 9-182 (654)
248 PRK09848 glucuronide transport 98.5 9.1E-07 2E-11 88.8 11.8 145 268-412 11-172 (448)
249 PF03209 PUCC: PUCC protein; 98.5 2.1E-06 4.6E-11 81.8 13.2 155 293-449 8-183 (403)
250 KOG3574|consensus 98.5 4.2E-06 9E-11 78.1 14.3 332 9-418 51-432 (510)
251 KOG3762|consensus 98.4 7.4E-07 1.6E-11 86.8 8.9 148 15-163 398-547 (618)
252 PF05631 DUF791: Protein of un 98.4 6.9E-06 1.5E-10 77.1 13.0 165 277-444 46-217 (354)
253 PF13000 Acatn: Acetyl-coenzym 98.4 8.3E-05 1.8E-09 72.5 20.4 155 260-416 273-466 (544)
254 COG2211 MelB Na+/melibiose sym 98.3 3.4E-06 7.4E-11 82.6 10.7 173 268-441 15-205 (467)
255 PF03092 BT1: BT1 family; Int 98.3 8.8E-06 1.9E-10 80.9 13.4 151 293-445 18-177 (433)
256 KOG0253|consensus 98.3 2.9E-06 6.2E-11 79.0 9.0 151 293-448 106-256 (528)
257 KOG4686|consensus 98.3 1.3E-06 2.9E-11 78.2 6.6 140 13-155 290-435 (459)
258 TIGR00926 2A1704 Peptide:H+ sy 98.3 3.7E-06 7.9E-11 87.2 10.5 162 280-442 2-181 (654)
259 TIGR00769 AAA ADP/ATP carrier 98.3 0.00017 3.6E-09 71.7 21.4 114 23-137 43-190 (472)
260 PF06779 DUF1228: Protein of u 98.3 7.1E-07 1.5E-11 65.5 3.0 76 5-80 9-84 (85)
261 PF12832 MFS_1_like: MFS_1 lik 98.2 2E-06 4.4E-11 62.6 4.7 66 269-334 4-69 (77)
262 KOG3880|consensus 98.2 3.9E-05 8.5E-10 69.7 12.8 325 25-411 64-398 (409)
263 PF03137 OATP: Organic Anion T 98.1 5.5E-07 1.2E-11 91.5 -0.4 178 270-449 8-256 (539)
264 TIGR00939 2a57 Equilibrative N 98.1 0.0003 6.4E-09 69.8 17.9 144 266-410 270-427 (437)
265 COG0477 ProP Permeases of the 98.0 0.00029 6.3E-09 65.8 16.4 153 278-432 15-174 (338)
266 KOG2563|consensus 97.8 0.00016 3.4E-09 69.7 11.1 121 295-418 75-203 (480)
267 TIGR00769 AAA ADP/ATP carrier 97.8 0.00045 9.7E-09 68.7 14.5 147 265-415 7-189 (472)
268 PF05978 UNC-93: Ion channel r 97.8 5E-05 1.1E-09 63.5 6.6 105 28-134 42-147 (156)
269 PF01770 Folate_carrier: Reduc 97.7 0.00043 9.4E-09 67.0 12.4 163 282-447 20-186 (412)
270 KOG2816|consensus 97.7 0.00022 4.8E-09 70.9 10.2 125 310-442 72-198 (463)
271 PF06779 DUF1228: Protein of u 97.7 0.00016 3.4E-09 53.2 6.5 78 279-358 6-83 (85)
272 KOG1237|consensus 97.7 0.0019 4.2E-08 66.0 16.6 153 9-162 59-244 (571)
273 PF12832 MFS_1_like: MFS_1 lik 97.5 4.7E-05 1E-09 55.4 1.8 57 7-63 19-75 (77)
274 PRK03612 spermidine synthase; 97.5 0.0026 5.6E-08 64.7 14.9 164 273-439 22-194 (521)
275 KOG0637|consensus 97.4 0.0015 3.2E-08 63.2 10.6 146 266-412 33-200 (498)
276 KOG3626|consensus 97.4 0.00013 2.8E-09 75.0 3.6 177 270-448 102-348 (735)
277 PF07672 MFS_Mycoplasma: Mycop 97.2 0.016 3.5E-07 52.1 14.9 55 108-162 2-61 (267)
278 PF03219 TLC: TLC ATP/ADP tran 97.1 0.019 4.1E-07 57.7 15.8 115 22-137 57-205 (491)
279 PF05978 UNC-93: Ion channel r 97.1 0.0073 1.6E-07 50.6 10.6 111 298-411 35-145 (156)
280 PF00854 PTR2: POT family; In 96.8 0.0017 3.7E-08 63.4 5.1 109 55-164 3-124 (372)
281 KOG1479|consensus 96.7 0.038 8.1E-07 53.4 13.3 106 301-408 283-396 (406)
282 PF00854 PTR2: POT family; In 96.7 0.0044 9.6E-08 60.5 7.2 86 356-442 34-122 (372)
283 PF01733 Nucleoside_tran: Nucl 96.6 0.00068 1.5E-08 64.3 0.6 107 304-411 186-304 (309)
284 KOG3574|consensus 96.5 0.038 8.3E-07 52.4 11.2 147 265-414 31-192 (510)
285 PF06963 FPN1: Ferroportin1 (F 96.2 0.32 7E-06 48.1 16.7 178 266-444 3-202 (432)
286 PF02487 CLN3: CLN3 protein; 96.0 0.035 7.5E-07 54.0 9.0 130 303-440 62-192 (402)
287 PRK03612 spermidine synthase; 95.9 0.028 6E-07 57.3 8.3 137 17-154 44-188 (521)
288 KOG4830|consensus 95.7 0.008 1.7E-07 53.6 3.0 144 260-404 196-344 (412)
289 KOG1237|consensus 95.3 0.1 2.2E-06 53.6 9.5 173 267-441 39-243 (571)
290 PF03219 TLC: TLC ATP/ADP tran 95.1 0.75 1.6E-05 46.4 14.8 151 264-416 23-205 (491)
291 KOG2601|consensus 94.8 0.14 3.1E-06 48.5 8.2 140 14-154 53-217 (503)
292 KOG1479|consensus 93.4 1.8 3.9E-05 42.1 12.8 176 264-443 17-204 (406)
293 KOG4332|consensus 92.0 0.13 2.7E-06 46.7 2.8 103 279-384 51-154 (454)
294 COG3202 ATP/ADP translocase [E 91.0 5 0.00011 39.9 12.7 150 264-417 26-210 (509)
295 PF13000 Acatn: Acetyl-coenzym 90.2 0.62 1.3E-05 46.3 5.8 142 267-411 2-174 (544)
296 COG3202 ATP/ADP translocase [E 89.2 26 0.00056 35.1 23.0 118 20-137 58-209 (509)
297 KOG3097|consensus 88.9 1.1 2.3E-05 42.1 6.0 87 14-104 51-137 (390)
298 KOG3098|consensus 88.8 2.4 5.2E-05 42.2 8.8 104 305-411 55-158 (461)
299 PF03547 Mem_trans: Membrane t 88.5 26 0.00056 34.2 20.8 21 259-279 239-259 (385)
300 TIGR00939 2a57 Equilibrative N 79.1 21 0.00046 35.6 10.8 33 355-388 106-138 (437)
301 COG4262 Predicted spermidine s 78.3 66 0.0014 30.9 13.1 147 295-444 38-193 (508)
302 KOG2601|consensus 77.1 55 0.0012 31.8 12.0 169 265-435 27-218 (503)
303 COG5336 Uncharacterized protei 63.8 10 0.00022 29.0 3.4 32 387-418 38-69 (116)
304 KOG3880|consensus 61.5 14 0.00031 34.6 4.6 65 69-134 335-400 (409)
305 PF12805 FUSC-like: FUSC-like 59.9 85 0.0019 29.2 9.8 79 352-445 20-98 (284)
306 PF01102 Glycophorin_A: Glycop 58.2 14 0.00031 29.3 3.6 23 427-449 73-95 (122)
307 COG2274 SunT ABC-type bacterio 57.6 1.6E+02 0.0034 31.6 12.2 143 305-448 162-320 (709)
308 KOG3810|consensus 52.8 4.7 0.0001 38.3 0.1 121 323-446 65-186 (433)
309 PF07857 DUF1632: CEO family ( 50.3 2E+02 0.0044 26.3 10.3 13 297-309 215-227 (254)
310 PF06912 DUF1275: Protein of u 47.3 2E+02 0.0043 25.2 13.0 23 397-419 168-190 (209)
311 PF00909 Ammonium_transp: Ammo 46.4 1.6E+02 0.0034 29.1 9.6 37 108-144 107-143 (399)
312 PF02694 UPF0060: Uncharacteri 46.1 29 0.00063 26.6 3.4 53 21-73 52-104 (107)
313 PF02694 UPF0060: Uncharacteri 45.9 33 0.00072 26.3 3.6 37 299-335 53-89 (107)
314 PRK10263 DNA translocase FtsK; 44.0 37 0.0008 38.4 5.1 19 401-419 141-159 (1355)
315 PRK02237 hypothetical protein; 41.2 54 0.0012 25.3 4.2 36 300-335 56-91 (109)
316 PF02990 EMP70: Endomembrane p 39.6 2.3E+02 0.005 29.1 9.9 35 293-327 285-324 (521)
317 KOG4830|consensus 38.9 35 0.00075 31.3 3.3 56 270-325 22-77 (412)
318 COG3619 Predicted membrane pro 38.8 2.9E+02 0.0063 24.8 13.3 43 395-439 172-214 (226)
319 PF06800 Sugar_transport: Suga 37.9 1.2E+02 0.0026 27.9 6.7 45 390-437 72-117 (269)
320 COG4769 Predicted membrane pro 37.4 53 0.0012 27.5 3.9 48 36-90 86-133 (181)
321 PF06912 DUF1275: Protein of u 36.9 2.9E+02 0.0062 24.2 9.9 34 117-151 167-200 (209)
322 PF03606 DcuC: C4-dicarboxylat 36.5 1.3E+02 0.0029 30.3 7.5 14 146-159 6-19 (465)
323 PRK02237 hypothetical protein; 36.5 63 0.0014 25.0 3.8 51 23-73 56-106 (109)
324 TIGR01667 YCCS_YHJK integral m 35.1 5.1E+02 0.011 27.8 11.8 77 352-445 78-156 (701)
325 PF15048 OSTbeta: Organic solu 33.5 56 0.0012 25.9 3.3 24 416-440 31-54 (125)
326 COG5336 Uncharacterized protei 32.2 1.4E+02 0.003 23.1 5.0 33 107-139 37-69 (116)
327 PF01733 Nucleoside_tran: Nucl 32.1 18 0.00038 34.3 0.4 104 27-132 186-304 (309)
328 COG4262 Predicted spermidine s 30.5 2.6E+02 0.0057 27.1 7.6 87 19-106 39-134 (508)
329 TIGR01666 YCCS hypothetical me 30.3 4.1E+02 0.0089 28.5 10.1 76 352-444 78-155 (704)
330 PF10225 DUF2215: Uncharacteri 29.3 2.5E+02 0.0055 25.6 7.4 61 71-135 29-89 (249)
331 TIGR00836 amt ammonium transpo 28.4 5.9E+02 0.013 25.2 10.6 45 364-408 284-328 (403)
332 COG0861 TerC Membrane protein 28.2 3.6E+02 0.0077 24.7 8.1 76 354-434 15-92 (254)
333 COG3619 Predicted membrane pro 28.1 4.4E+02 0.0096 23.6 8.9 32 21-53 53-84 (226)
334 PF15099 PIRT: Phosphoinositid 27.8 1.2E+02 0.0025 24.2 4.1 28 421-448 83-110 (129)
335 PF04281 Tom22: Mitochondrial 26.8 2.1E+02 0.0045 23.3 5.6 54 380-443 60-113 (137)
336 COG0733 Na+-dependent transpor 26.4 6.6E+02 0.014 25.1 10.8 40 258-298 206-248 (439)
337 PRK15015 carbon starvation pro 26.3 8E+02 0.017 26.0 14.0 40 105-148 80-121 (701)
338 TIGR00801 ncs2 uracil-xanthine 25.9 5.6E+02 0.012 25.4 9.8 46 280-326 17-63 (415)
339 PF10183 ESSS: ESSS subunit of 25.8 1.1E+02 0.0024 23.5 3.8 33 136-168 54-86 (105)
340 PTZ00370 STEVOR; Provisional 25.3 1.6E+02 0.0034 27.3 5.1 32 419-450 255-286 (296)
341 PRK10297 PTS system N,N'-diace 24.8 64 0.0014 32.4 2.9 38 410-448 396-433 (452)
342 PF07760 DUF1616: Protein of u 24.0 2.6E+02 0.0057 26.0 6.7 50 84-135 26-77 (287)
343 COG1575 MenA 1,4-dihydroxy-2-n 23.1 6.4E+02 0.014 23.8 10.5 23 277-299 52-75 (303)
344 PF08611 DUF1774: Fungal prote 22.9 1.2E+02 0.0026 22.9 3.3 22 421-442 52-73 (97)
345 TIGR03644 marine_trans_1 proba 22.8 7.5E+02 0.016 24.5 13.1 29 382-410 315-343 (404)
346 COG2076 EmrE Membrane transpor 22.6 2.3E+02 0.005 21.9 4.9 54 41-94 18-71 (106)
347 COG2233 UraA Xanthine/uracil p 22.4 8E+02 0.017 24.6 13.8 121 273-393 21-143 (451)
348 PF06716 DUF1201: Protein of u 21.4 2.2E+02 0.0048 18.0 3.7 21 425-445 15-35 (54)
349 PF01914 MarC: MarC family int 20.9 2.7E+02 0.0058 24.5 5.7 55 384-438 31-85 (203)
350 PF06645 SPC12: Microsomal sig 20.1 38 0.00082 24.4 0.2 30 408-440 24-53 (76)
No 1
>KOG2504|consensus
Probab=100.00 E-value=3.9e-46 Score=370.86 Aligned_cols=423 Identities=40% Similarity=0.734 Sum_probs=350.5
Q ss_pred CCcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHH
Q psy15069 1 DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLC 80 (461)
Q Consensus 1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~ 80 (461)
||+.+++|++.++++++++.++++++|+.++....+.+++|+.+.+.||||.|+++++|.++.++++++.+|++++|+++
T Consensus 59 ~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~ 138 (509)
T KOG2504|consen 59 DGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLY 138 (509)
T ss_pred hcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 81 ITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 81 i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
++++++.|+|.++.+.++..++.+||+|||++|+|+..+|.++|.++.|++...+++.+|||+++++.+.+.+...++..
T Consensus 139 lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~ 218 (509)
T KOG2504|consen 139 LTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGA 218 (509)
T ss_pred HHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069 161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240 (461)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (461)
.++|..+.....+.+ +.+....+.+....+. +......+....+ .++.+++.
T Consensus 219 ~~rp~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~----~~~~~~~~ 270 (509)
T KOG2504|consen 219 LLRPLSPPKKPNEEK-----DLRNSAASVESTPKPV-------------------ELRISERDSGLKK----LSLSNLAT 270 (509)
T ss_pred HcCCCCcCCCchhhh-----hhcccccccccccccc-------------------ccccccCCCCCCc----ccccchhh
Confidence 998865333211000 0000000000000000 0000000000000 00000000
Q ss_pred ccccCC-ch--hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069 241 TCLNLS-DD--TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSR 317 (461)
Q Consensus 241 ~~~~~~-~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~ 317 (461)
..+..+ .. ..+.....++.+++|+|.|+.+.+...+...++.....++|.|.++.|++..+++.++++.++.+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gR 350 (509)
T KOG2504|consen 271 LKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGR 350 (509)
T ss_pred hhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhh
Confidence 000000 00 011112245578999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069 318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL 397 (461)
Q Consensus 318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 397 (461)
++.|+++|+...++..+..+++++.+++.+.+++.++++.++...+++|++.|........++.|+.+.++...++|+..
T Consensus 351 i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l 430 (509)
T KOG2504|consen 351 IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLL 430 (509)
T ss_pred hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHH
Confidence 99999999977778888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH-HhhHhHhh
Q psy15069 398 LFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP-SLQSYLLK 451 (461)
Q Consensus 398 ~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~-~~~~~~~~ 451 (461)
.+.+++..+||+++|+++|.+|+|...|++.++..+++..+++..+ ..+++.++
T Consensus 431 ~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~~~~~~~~~~ 485 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILRECLKRREKS 485 (509)
T ss_pred HHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhHHHHHhcccc
Confidence 9999999999999999999999999999999999999998888888 45544433
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-42 Score=321.48 Aligned_cols=386 Identities=14% Similarity=0.143 Sum_probs=317.0
Q ss_pred ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069 4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~ 83 (461)
.+.|++.+|++++|.++|.+|+|++.|++.+.|+++..+.|.+.||.++|+.+..|+++.++..++++++++++.+.+++
T Consensus 45 RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~ 124 (448)
T COG2271 45 RKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLW 124 (448)
T ss_pred HHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHH--HHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPII--DYTVREYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~--~~l~~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
++.|..+|+.+|++...+.+||+ |+||+..++.+...++|+.+.|++. +.+...++||..|++-|++++++.++.+
T Consensus 125 -~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 125 -VLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred -HHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999995 8999999999999999999999999 8888888999999999999998888777
Q ss_pred hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCc-cccccccCC-CCCCCCccc
Q psy15069 161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVIST-QAQIDSKAT-VPESESTED 238 (461)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~ 238 (461)
+..+++|+..- +|+ ++ -|. +.+..++++
T Consensus 204 ~~~rd~Pqs~G----------------------------------------------LP~ie~----~~~d~~e~~~~~~ 233 (448)
T COG2271 204 FLLRDRPQSEG----------------------------------------------LPPIEE----YRGDPLEIYEEEK 233 (448)
T ss_pred HHhCCCccccC----------------------------------------------CCCHHH----hhcCchhhhhhhc
Confidence 76655433221 000 00 000 000000000
Q ss_pred ccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069 239 KTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSR 317 (461)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~ 317 (461)
+...-+.++.+..-+++||.+|.+++++++.+...+++..|.|.|+ |..|+|..++.+..+.+-.++++|.
T Consensus 234 --------~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~ 305 (448)
T COG2271 234 --------ENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT 305 (448)
T ss_pred --------cCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH
Confidence 0000233444445689999999999999999999999999999999 8889999999999999999999999
Q ss_pred hhhhhccCCCCc-chhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069 318 VILGYISDRPCV-NRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG 394 (461)
Q Consensus 318 ~~~g~l~dr~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 394 (461)
+++||++||.-+ ||..+-.++++...+++....+.+ +++...++.++.|+......-+.-....|..|++..|++.|
T Consensus 306 Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~G 385 (448)
T COG2271 306 LLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATG 385 (448)
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhc
Confidence 999999999643 344444455555555555555555 45777788888998876666677777899999999999999
Q ss_pred HHHHHHHh-hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhH
Q psy15069 395 LLLLFQGI-ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYL 449 (461)
Q Consensus 395 ~~~~~~~~-g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~ 449 (461)
+.+.+.++ |.+.+....|++.|.+| |...|++..+.++++.+++....+.++++
T Consensus 386 f~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~~~~~~~~~~ 440 (448)
T COG2271 386 FVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLLPVWNAEERK 440 (448)
T ss_pred hhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 99999999 89999999999999975 99999998888888887776665554443
No 3
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=7e-41 Score=335.06 Aligned_cols=382 Identities=31% Similarity=0.592 Sum_probs=302.2
Q ss_pred ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069 4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~ 83 (461)
.++++++.|++++++|.+.++.+++.+.+.+...+++|+.|++.||+|||++++.+.++.+++.++++++++++.+++..
T Consensus 35 ~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 114 (455)
T TIGR00892 35 PKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTA 114 (455)
T ss_pred hcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999987655
Q ss_pred hccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
|++.|++.+...++...++.+|++++|++++|+..++..+|..++|++++.+.+.+|||++|++.++++++..++.++++
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 78999999877777778888999999999999999999999999999999999999999999999998887666655555
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
++++.++.++.++ +++ .++ + + ++++.+ .
T Consensus 195 ~~~~~~~~~~~~~---~~~------~~~-----------------------------~------~----~~~~~~-~--- 222 (455)
T TIGR00892 195 PVGPSQRVSKSKS---KEG------LPP-----------------------------D------G----STKKLS-K--- 222 (455)
T ss_pred CCCcccccccccc---ccc------CCC-----------------------------C------C----cccccc-c---
Confidence 5432211000000 000 000 0 0 000000 0
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
........+..+.+++++|.++...+..++...+.+....++|.|.++.|++..+++++.++.+++.++++++.|++
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 299 (455)
T TIGR00892 223 ---KSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLI 299 (455)
T ss_pred ---cchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111222235688999998888888888888888899999998899999999999999999999999999999
Q ss_pred cCCCCc--chhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069 324 SDRPCV--NRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG 401 (461)
Q Consensus 324 ~dr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 401 (461)
+||... ++...+..++++.++..++....++.+.+++..+++|++.+...+...+++.|.+|++++++++|+.+...+
T Consensus 300 ~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 379 (455)
T TIGR00892 300 AGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVEC 379 (455)
T ss_pred hcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHH
Confidence 997422 333333344444445445555667778888888999999998889999999999999999999999999999
Q ss_pred hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
+|.++||.++|.+.|..|+|+..|++.+++.+++.+..+
T Consensus 380 lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 380 CAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 999999999999999988899999998888777665433
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.6e-39 Score=323.02 Aligned_cols=381 Identities=12% Similarity=0.046 Sum_probs=282.9
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc-----ccchhhH
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF-----AKNVITL 79 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~-----~~~~~~l 79 (461)
+.+++..|++++|+|++..+.|++.+.+.+++.+++++.|.+.||+|+|+++..+.++++++.++.++ ++|++.+
T Consensus 46 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 125 (467)
T PRK09556 46 KNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLM 125 (467)
T ss_pred cChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 45778899999999999999999999999999999999999999999999998888887777765544 6899999
Q ss_pred HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh---chhHHHHHHHHHHHHH
Q psy15069 80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY---GWKITLLVLSVTVLSA 155 (461)
Q Consensus 80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~---gw~~~f~i~~~~~l~~ 155 (461)
++ .|+++|++.+...+....++.+|+| ++||+++|+...+.++|.++++++...+.+.+ +||..|.+.++++++.
T Consensus 126 ~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~ 204 (467)
T PRK09556 126 IA-LWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALII 204 (467)
T ss_pred HH-HHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHH
Confidence 98 4999999999999999999999995 78999999999999999999999988777654 6999999988888777
Q ss_pred HHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCC
Q psy15069 156 VLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESES 235 (461)
Q Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (461)
.+..+++.++++++....+. ++.. .+. . ++++ + .++
T Consensus 205 ~i~~~~~~~~~p~~~~~~~~-----~~~~------------~~~------------------~-~~~~----~----~~~ 240 (467)
T PRK09556 205 GFIGLRYGSDSPEELGWGKA-----EEIF------------GEP------------------I-SEED----K----ETE 240 (467)
T ss_pred HHHHHHhCCCChhhcCCCCh-----hhcc------------cCc------------------c-chhh----h----ccc
Confidence 66655554432211100000 0000 000 0 0000 0 000
Q ss_pred cccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhh
Q psy15069 236 TEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANM 314 (461)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ 314 (461)
+ + +. ...+......+|+|.+|...+..++.+..++....|+|.|+ +++|++..++++..+...++.+
T Consensus 241 ~-~-------~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ 308 (467)
T PRK09556 241 S-T-------DM----TKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGAL 308 (467)
T ss_pred c-c-------cC----cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence 0 0 00 00011111368999999999999888888888889999999 6689999999999999999999
Q ss_pred hhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069 315 VSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG 394 (461)
Q Consensus 315 ~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 394 (461)
++++++|+++||+++|+..+........+...+.....++.+...+..++.|++.............|.+|++++|++.|
T Consensus 309 ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~g 388 (467)
T PRK09556 309 VGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANG 388 (467)
T ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHH
Confidence 99999999999987665543322222222222222333455555566667775543333333456679999999999999
Q ss_pred HHHHHHHh-hhhhccceeeeeec------------ccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 395 LLLLFQGI-ASLVGPPIAGFLYD------------STLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 395 ~~~~~~~~-g~~~gp~i~g~l~~------------~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
+.+...++ |.+++|.+.|++.| .. +|+..|++.+++.+++.+..+.+.
T Consensus 389 i~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 389 IKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 77999999999999 44 499999999888888877766654
No 5
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=5.4e-38 Score=308.83 Aligned_cols=353 Identities=12% Similarity=0.086 Sum_probs=280.3
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
++.+++.|++++|+|+|+.+.|++.+++.+++.+++++.|++.||+|||+++..+..+++++.+++++++|++.+++. |
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~-r 104 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSS-A 104 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHH-H
Confidence 678999999999999999999999999999999999999999999999999999999999999999999999999875 9
Q ss_pred ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
+++|+|.+...+....++.+|+|++|++++|+..++..+|..+++++++.+.+.+ |||+.+.+.++..++..+..++..
T Consensus 105 ~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 105 LLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998888888999999999999999999999999999999999988876 899998877666554433222221
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
++ .|+++ ++ +
T Consensus 185 ~~--~~~~~-~~-----------------------------------------------------------~-------- 194 (393)
T PRK09705 185 AR--EVASS-HK-----------------------------------------------------------T-------- 194 (393)
T ss_pred cC--CCccc-cC-----------------------------------------------------------C--------
Confidence 11 11100 00 0
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
+ .. ..+.+++|+.|.+.+..++....++....|+|.++++.|.+..+++...+...++.++++++.|++
T Consensus 195 ---~---~~-----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l 263 (393)
T PRK09705 195 ---T---TT-----PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAM 263 (393)
T ss_pred ---C---cC-----CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 013457778888777777777788888899999998899999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHH
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQG 401 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~ 401 (461)
.||+++++.... +..+..+...+... .++... ...++.|++.+...+.......+..+ ++++++..|+.+....
T Consensus 264 ~~r~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~--~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 339 (393)
T PRK09705 264 ARHQDRRKLLML--ALVLQLVGFCGFIWLPLQLPV--LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGF 339 (393)
T ss_pred HhhccchHHHHH--HHHHHHHHHHHHHHccchHHH--HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence 999765544433 33333333333222 222222 22345677777777776666667774 5789999999999999
Q ss_pred hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
++..++|.+.|++.|+.|+|+..|++.+++.++..+....++
T Consensus 340 ~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 340 IIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998887777665544443
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=7.3e-38 Score=311.99 Aligned_cols=378 Identities=13% Similarity=0.109 Sum_probs=279.2
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
+.++.+.|++.+++|.|..+.|++.+++.+++.+++++.|++.||+|+|+++..+.++.+++.++.+++++++.+++. |
T Consensus 40 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~ 118 (434)
T PRK11663 40 KSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALL-W 118 (434)
T ss_pred hhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH-H
Confidence 356788999999999999999999999999999999999999999999999999999999999999999999999875 8
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
++.|++.+..++....++.+|+| |+|++++++.+++.++|.+++|++.+.+.+.+|||+.|++.++++++..+...+..
T Consensus 119 ~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~ 198 (434)
T PRK11663 119 VLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRL 198 (434)
T ss_pred HHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999888888899999996 68999999999999999999999999999999999999999887766544444333
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
++++... +..+.. +. +++ .+ +.+++.
T Consensus 199 ~~~p~~~--~~~~~~--~~-------~~~----------------------------~~----------~~~~~~----- 224 (434)
T PRK11663 199 RDKPQAM--GLPSVG--EW-------RHD----------------------------AL----------ELAQQQ----- 224 (434)
T ss_pred CCCHhhc--CCCCcc--cc-------ccc----------------------------cc----------ccchhc-----
Confidence 3322111 000000 00 000 00 000000
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
++.+.+.++......+++|.+|.+.+..++.+...+.+..|+|.|+ ++.|++..+++...+...++.++++++.|+
T Consensus 225 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~ 301 (434)
T PRK11663 225 ---EGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGW 301 (434)
T ss_pred ---cccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0000011111111256889999888888877777778888999999 678999999999999999999999999999
Q ss_pred ccCCCCcc-hhHH--H-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069 323 ISDRPCVN-RLYI--Y-NGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL 398 (461)
Q Consensus 323 l~dr~~~~-~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 398 (461)
++||+.++ |+.. . ..+..+..+.+.... ..+........+..|++.............|.+|+++++++.|+.++
T Consensus 302 l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 380 (434)
T PRK11663 302 GSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGL 380 (434)
T ss_pred hHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHH
Confidence 99997322 2221 1 122222222222222 22333333333444443332233344567899999999999999999
Q ss_pred HHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 399 FQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 399 ~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
..++|++++|.+.|++.|+.| |+..|+..+++.+++++.....
T Consensus 381 ~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 423 (434)
T PRK11663 381 FAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLLLPF 423 (434)
T ss_pred HHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999986 9999999998888777655443
No 7
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-37 Score=292.87 Aligned_cols=354 Identities=17% Similarity=0.214 Sum_probs=296.5
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTG 88 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G 88 (461)
-++|++++|+|+|..+.|+..|.|.+++.++.|+...+.||+.||++++..+.++.++.+++++++||+.+++. |++.|
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~a-R~~~g 112 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLA-RALAG 112 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999996 99999
Q ss_pred ccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069 89 LGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEE 167 (461)
Q Consensus 89 ~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~ 167 (461)
+..|..++....+..+.. |+||++++++...|..++.+++.|++.++.+.+|||++|++.++++++..+..+...| ++
T Consensus 113 ~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~ 191 (394)
T COG2814 113 LAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-PS 191 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC-Cc
Confidence 999999999999999988 5899999999999999999999999999999999999999999999999888888777 21
Q ss_pred CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069 168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD 247 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (461)
..++ +. +.
T Consensus 192 ~~~~-~~-----------------------------------------------------------------------~~ 199 (394)
T COG2814 192 EISG-SL-----------------------------------------------------------------------PG 199 (394)
T ss_pred cCCC-CC-----------------------------------------------------------------------Cc
Confidence 1110 00 00
Q ss_pred hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069 248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR 326 (461)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 326 (461)
+.++. .+++|+|+.+..++..++...+.+..++|+.+++ +..|++.+..++++..++++.++|++++|++.||
T Consensus 200 ~~~~~------~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr 273 (394)
T COG2814 200 PLRTL------LRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR 273 (394)
T ss_pred chhHH------HHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 00011 2468999999999999999999999999999999 5679999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhh
Q psy15069 327 PCVNRLYIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASL 405 (461)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 405 (461)
+.++... ....+..+.++.+.+ ..+.+......+++|+..............+.. ++++..+.+++....++|..
T Consensus 274 -~~~~~l~--~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia 349 (394)
T COG2814 274 -GPRRALI--AALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIA 349 (394)
T ss_pred -cchhHHH--HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHH
Confidence 4444433 233333333333343 345556666666788877766666666666644 48899999999999999999
Q ss_pred hccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069 406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS 447 (461)
Q Consensus 406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~ 447 (461)
+|..++|.++|+. +|....+..+.+.+++.++.+...+.++
T Consensus 350 ~GA~lGG~v~~~~-g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 350 LGAALGGLVLDAL-GYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred HHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999995 5999999999999888887766544433
No 8
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=4.5e-38 Score=307.54 Aligned_cols=357 Identities=20% Similarity=0.269 Sum_probs=287.2
Q ss_pred CcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHH
Q psy15069 2 GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCI 81 (461)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i 81 (461)
|..|+++++.|++.+++|+|..+.|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+++++++|++.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (377)
T TIGR00890 17 GYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL 96 (377)
T ss_pred hHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069 82 TIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL 161 (461)
Q Consensus 82 ~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~ 161 (461)
+ |++.|++.+..++.....+.+|+||+|++++++...+.++|..+++++.+.+.+.+|||+.|++.++++++..+..++
T Consensus 97 ~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 97 T-YGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred H-HHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 5 899999999888888888899999999999999999999999998899888888889999999999988887766655
Q ss_pred cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
+.+++++++ +++ +++.
T Consensus 176 ~~~~~~~~~--~~~---------------------------------------------------------~~~~----- 191 (377)
T TIGR00890 176 LIGYPPGQL--IKT---------------------------------------------------------NIEV----- 191 (377)
T ss_pred heecCchhc--ccc---------------------------------------------------------Cccc-----
Confidence 544332111 000 0000
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILG 321 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g 321 (461)
++.+... .+.+|+|.++.+.+..++..........+.+.+.++.|.+..+.+.+.+...++.++++++.|
T Consensus 192 -----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 261 (377)
T TIGR00890 192 -----SVKDYTV-----WEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLG 261 (377)
T ss_pred -----chhhhhH-----HHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111 135678888887777776666665566677778888999998999999999999999999999
Q ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069 322 YISDRPCVNRLYIYNGCLAICGAATVICAFCYN--YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF 399 (461)
Q Consensus 322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 399 (461)
++.||+++++... .+....+++.++..+.++ .+......++.|++.+...+..+.++.|.+|+++++++.|+.+..
T Consensus 262 ~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 339 (377)
T TIGR00890 262 ALSDKIGRQKTMS--IVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTA 339 (377)
T ss_pred HHHHHHhhhhhhh--HHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHH
Confidence 9999976554433 444455555444444443 223334456778888777777788899999999999999999999
Q ss_pred HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069 400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG 436 (461)
Q Consensus 400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~ 436 (461)
..+|..++|.+.|.+.|..| |+..|.+.+++.+++.
T Consensus 340 ~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 340 KAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 99999999999999999875 9999988887766654
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.5e-36 Score=298.72 Aligned_cols=347 Identities=16% Similarity=0.181 Sum_probs=279.1
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTG 88 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G 88 (461)
.+.|++++|+|.|+.++|++.+.+.+++.+++++.|.+.||+|||+++..+.++.+++.+.+++++|++.+++. |+++|
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~~~G 108 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLIS-RIGIA 108 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999985 89999
Q ss_pred ccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069 89 LGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEE 167 (461)
Q Consensus 89 ~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~ 167 (461)
++.+..++...+.+.+++ +++|++++|+...+.++|..++|++++.+.+.+|||++|++.++++++..+......|+++
T Consensus 109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999988888888889988 5889999999999999999999999999999999999999999888776655444433321
Q ss_pred CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069 168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD 247 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (461)
.++ + .
T Consensus 189 ~~~--~-------------------------------------------------------------------------~ 193 (390)
T PRK03545 189 SEH--S-------------------------------------------------------------------------G 193 (390)
T ss_pred CCC--c-------------------------------------------------------------------------c
Confidence 100 0 0
Q ss_pred hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069 248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR 326 (461)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 326 (461)
+. +.. .+.+|+|.++...+..++.....+....+++.++ ++.|++..+.+.+.+...++.++++++.|+++||
T Consensus 194 ~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 267 (390)
T PRK03545 194 SL-KSL-----PLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR 267 (390)
T ss_pred hH-HHH-----HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 00 111 1357888887666665555555555667788887 4579999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHH-HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhh
Q psy15069 327 PCVNRLYIYNGCLAICGAAT-VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASL 405 (461)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 405 (461)
++++ .+. .+..+.++.. .+....++.+.+++..+++|++.+...+.....+.+..| +++++++|+.+....+|..
T Consensus 268 ~~~~--~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ 343 (390)
T PRK03545 268 HPSG--FLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIG 343 (390)
T ss_pred cchh--HHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHH
Confidence 6543 222 2222223332 223345566777778888898877666777777888876 6889999999999999999
Q ss_pred hccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+||.++|+++|+.| ++..|+..+++.+++.+.....
T Consensus 344 ~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 344 AGALLGNQVSLHLG-LSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985 9999999888887777665443
No 10
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.9e-36 Score=296.46 Aligned_cols=378 Identities=14% Similarity=0.158 Sum_probs=286.7
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
+.++...|.+++++|.+..+.+++.+++.++..+++++.|.+.||+|||+++..+.++.+++.+++++++|++.+++. |
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 89 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYIL-R 89 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHH-H
Confidence 456788899999999999999999999999999999999999999999999999999999999999999999999985 8
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
++.|++.+...+....++.+++| |+|++++++.....++|.+++|++.+.+.+.+|||+.|++.+++.++..+..++..
T Consensus 90 ~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 90 VLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred HHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhhee
Confidence 99999999999999999999995 78999999999999999999999999999999999999999888877666655554
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
++++.++.+..+ ++ +. . ... . .+ .+++++++
T Consensus 170 ~~~~~~~~~~~~-----~~---------~~-~-~~~---------------------~-----~~--~~~~~~~~----- 200 (399)
T TIGR00893 170 PDPPQKAKWLTE-----EE---------KY-I-VVG---------------------G-----LL--AEQQGKGP----- 200 (399)
T ss_pred cCCCCccccCCH-----HH---------Hh-h-cch---------------------h-----hc--cccccccc-----
Confidence 443221100000 00 00 0 000 0 00 00000000
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
++..+... ++.+|+|+++...+..++.......+..+.|.|+ ++.|.++.+.+++.+...++.++++++.|+
T Consensus 201 --~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (399)
T TIGR00893 201 --STPKKYQI-----KELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGR 273 (399)
T ss_pred --cCCCccch-----HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 00001111 2457889999988888888888888999999998 668999999999999999999999999999
Q ss_pred ccCCCCcchhHHHH------HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHH
Q psy15069 323 ISDRPCVNRLYIYN------GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLL 396 (461)
Q Consensus 323 l~dr~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 396 (461)
+.||+++|+..+.. .+.++.++........++.+.......+.+++.+ ..+....++.|.+|+++|+++.|+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (399)
T TIGR00893 274 LSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLI 352 (399)
T ss_pred HHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHH
Confidence 99997766421111 1111111111111112233333333333333444 7788889999999999999999999
Q ss_pred HHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 397 LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 397 ~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
+...++|..++|.+.|.+.|..|+|+..|.+.+++.+++.+..+
T Consensus 353 ~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 353 NSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987799999988888777766554
No 11
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1e-36 Score=295.57 Aligned_cols=353 Identities=13% Similarity=0.056 Sum_probs=266.3
Q ss_pred ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069 4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~ 83 (461)
-.+|+.+.|.+++|+|+|+.+.|++.+.+.+++.+++++.|.+.||+|||+++..+......+.+.....+|++.+++.
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 85 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLAC- 85 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHH-
Confidence 4578899999999999999999999999999999999999999999999987665555544443333333788888874
Q ss_pred hccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILL 162 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~ 162 (461)
|+++|+|.+. .++....+.+|+ +|+|++++++.+++..+|.+++++++..+.+.+|||+.|++.++++++..++.++.
T Consensus 86 R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 86 QLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999986 455555667888 58999999999999999999999999999999999999999999988877666665
Q ss_pred ccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069 163 RPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC 242 (461)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (461)
.|+.| ++++++ .+
T Consensus 165 lp~~p--~~~~~~----------------------------------------------------------~~------- 177 (368)
T TIGR00903 165 LPALP--FQAAEG----------------------------------------------------------FG------- 177 (368)
T ss_pred cCCCC--CCCCCC----------------------------------------------------------cc-------
Confidence 55432 210000 00
Q ss_pred ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
.++..++. ++++|+|.+|.+.+..++....++.+.+|+|.|+++.|++.. .+...++..+.+.++ .++
T Consensus 178 ---~~~~~~~~-----~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~ 245 (368)
T TIGR00903 178 ---FKDAVKEF-----GALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAV 245 (368)
T ss_pred ---hHHHHHHH-----HHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHH
Confidence 00000111 246899999999999999999999999999999988888865 566666666655555 467
Q ss_pred ccCCCCcc--hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069 323 ISDRPCVN--RLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400 (461)
Q Consensus 323 l~dr~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 400 (461)
++||..++ |+........+.++......+..+.+..+...++.+++.....+..+++.+|.+|++.|+++.|+.+...
T Consensus 246 ~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g 325 (368)
T TIGR00903 246 IPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTS 325 (368)
T ss_pred hhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHH
Confidence 77775433 2222222333334444444444455455556667777777777888889999999999999999999999
Q ss_pred HhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
++++.++|++.+.+.. +....|.+.++..+++++..+
T Consensus 326 ~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 326 RAISVALALAAMLFIS---SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987773 467788888877777766653
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=3e-36 Score=298.30 Aligned_cols=363 Identities=17% Similarity=0.158 Sum_probs=284.0
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
+.+++..|.+.+++|.++.+.|++.+.+.++..+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |
T Consensus 32 ~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 110 (406)
T PRK11551 32 QSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVA-R 110 (406)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHH-H
Confidence 456788999999999999999999999999999999999999999999999999999999999999999999999885 8
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
++.|++.+...+....++.+++| |+|++++++.+.+..+|..+++.++..+.+..+||+.|++.+++.+...++..++.
T Consensus 111 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 190 (406)
T PRK11551 111 LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWL 190 (406)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999988888899999995 88999999999999999999999998888888999999998877666655555544
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
|+++.+.+++.+ ++++
T Consensus 191 ~~~~~~~~~~~~----------------------------------------------------------~~~~------ 206 (406)
T PRK11551 191 PESRAFAQAAGA----------------------------------------------------------GKQR------ 206 (406)
T ss_pred CCChhHHhccCc----------------------------------------------------------chhh------
Confidence 443211100000 0000
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
+ ...+...+ ..+.+..+.+.+..++.....+....|+|.++++.|++..+.+...+...++.++++++.|++
T Consensus 207 ---~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 278 (406)
T PRK11551 207 ---A---PVLRALFG--EGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGAL 278 (406)
T ss_pred ---h---hhHHHHhh--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000 011223333444444445556667788999998899999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA 403 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 403 (461)
.||+++++... .+.+..+++++...+.++.+.+.+..++.|++.+...+....+..|.+|+++|+++.|+.+....+|
T Consensus 279 ~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 356 (406)
T PRK11551 279 MDRLRPRRVVL--LIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLG 356 (406)
T ss_pred HHHHhHHHHHH--HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHH
Confidence 99965444333 3444444454555556666667777788888887788888899999999999999999999999999
Q ss_pred hhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
..+||.++|.+.|+.++|...++......+++.++.+.+
T Consensus 357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987778877877776666666555443
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.6e-36 Score=300.10 Aligned_cols=377 Identities=12% Similarity=0.094 Sum_probs=271.6
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
...+...|.+++|+|+++.++|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+++++++|++.+++. |
T Consensus 25 ~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r 103 (412)
T TIGR02332 25 INIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLL-R 103 (412)
T ss_pred hhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-H
Confidence 345677899999999999999999999999999999999999999999999999999999999999999999999985 9
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH------hhchhHHHHHHHHHHHHHHH
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR------EYGWKITLLVLSVTVLSAVL 157 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------~~gw~~~f~i~~~~~l~~~i 157 (461)
++.|++.+...+.....+.+|+| |+|++++++.+.+.++|.++++++++.+.+ .+|||++|++.++.+++..+
T Consensus 104 ~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~ 183 (412)
T TIGR02332 104 ILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGV 183 (412)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHH
Confidence 99999999988888888999996 689999999999999999999999998874 36999999999888877666
Q ss_pred HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069 158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE 237 (461)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (461)
+.+++.|++|... +.. . ++++. ...+. .+. .+. ..++++
T Consensus 184 ~~~~~~~~~p~~~--~~l-~--~~~~~----------~~~~~----------------------~~~--~~~--~~~~~~ 222 (412)
T TIGR02332 184 MTWFWLDDSPDKA--KWL-D--EEDKK----------ALKEM----------------------IDN--DQL--TLEQPE 222 (412)
T ss_pred HHhhccCCCcccC--CCC-C--HHHHH----------HHHHH----------------------HHh--ccc--cccccc
Confidence 6555554432211 000 0 00000 00000 000 000 000000
Q ss_pred cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh--CCCchhhHHHHHHHhhhhhh
Q psy15069 238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR--GVTRSNASSLISIVGAANMV 315 (461)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~~ 315 (461)
+ ...+ .+...+...+ .+++|.+|...+.+++....++.+.+|+|.++++. +.+..+.+.......++.++
T Consensus 223 ~-~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~ 294 (412)
T TIGR02332 223 G-AFAH-AAMPQRSMLR------EIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIF 294 (412)
T ss_pred c-cccc-ccccHHHHHH------HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHH
Confidence 0 0000 0000111111 13467888888888888888889999999999764 67888889999999999999
Q ss_pred hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069 316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395 (461)
Q Consensus 316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 395 (461)
++++.|+++||+++|+.... ...+..++.+.+....++....+....+.+++.....+.......|.+|+++|++++|+
T Consensus 295 g~l~~g~l~dr~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~ 373 (412)
T TIGR02332 295 GMIWWSRHSDRLKERKHHTA-LPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAV 373 (412)
T ss_pred HHHHHHHHhcccCccHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHH
Confidence 99999999999875554332 22222233222222222222222222333333333334444555678899999999999
Q ss_pred HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHH
Q psy15069 396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAI 432 (461)
Q Consensus 396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~ 432 (461)
.+...++|++++|.+.|.+.|..|+|+..+++.++..
T Consensus 374 ~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 374 INATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 9999999999999999999999888999988776643
No 14
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.4e-35 Score=295.40 Aligned_cols=381 Identities=14% Similarity=0.127 Sum_probs=268.0
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc----chhhHHH
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK----NVITLCI 81 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~----~~~~l~i 81 (461)
+++...|++.++ |.++.+.|++.+++.+++.+++++.|++.||+|+|++++.+.++.+++.+++++++ +++.+++
T Consensus 47 ~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 125 (452)
T PRK11273 47 NFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFV 125 (452)
T ss_pred HHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence 456788999988 99999999999999999999999999999999999999999999999998887753 6667776
Q ss_pred HhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHH-HHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069 82 TIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPII-DYTVREYGWKITLLVLSVTVLSAVLFG 159 (461)
Q Consensus 82 ~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~-~~l~~~~gw~~~f~i~~~~~l~~~i~~ 159 (461)
.|++.|++.+..+++....+.+|+| |+|++++|+.+++.++|..+.+++. ..+....|||+.|++.++++++..++.
T Consensus 126 -~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 126 -LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred -HHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 4899999999888877778888885 7899999999999999875554443 333334599999999998877766655
Q ss_pred hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
+++.+++++....++++ +. .++ . .+. ..+++++
T Consensus 205 ~~~~~~~~~~~~~~~~~----~~--------------~~~---------------------~-----~~~-~~~~~~~-- 237 (452)
T PRK11273 205 FAMMRDTPQSCGLPPIE----EY--------------KND---------------------Y-----PDD-YNEKHEQ-- 237 (452)
T ss_pred HHHccCCHhhcCCCChh----hh--------------hhc---------------------c-----ccc-cccccCC--
Confidence 55544432111000000 00 000 0 000 0000000
Q ss_pred cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhh
Q psy15069 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRV 318 (461)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~ 318 (461)
+ .+.++......+|+|.+|...+..++.+...+....|+|.|++ +.|++..+.+.......++.+++++
T Consensus 238 ------~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~ 307 (452)
T PRK11273 238 ------E----LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTL 307 (452)
T ss_pred ------C----ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0111111123578999999888888888888888899999995 4799999999999999999999999
Q ss_pred hhhhccCCCCcchhH-HHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069 319 ILGYISDRPCVNRLY-IYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395 (461)
Q Consensus 319 ~~g~l~dr~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 395 (461)
+.|+++||++++|+. .....+.+..+..+.+.. ..+.+..++..++.|.+..........+..|.+|++++|++.|+
T Consensus 308 ~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 387 (452)
T PRK11273 308 LCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF 387 (452)
T ss_pred HHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHH
Confidence 999999997444432 211112222222222212 22333444444555554333333334567799999999999999
Q ss_pred HHHHHHhhhhh-ccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069 396 LLLFQGIASLV-GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 396 ~~~~~~~g~~~-gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~ 446 (461)
.+...++|+.+ +|.+.|.+.|+.| |+..|++.+++++++++......+.+
T Consensus 388 ~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~ 438 (452)
T PRK11273 388 TGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGE 438 (452)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99998888765 7999999999986 99999988888887776655444433
No 15
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.8e-35 Score=291.39 Aligned_cols=365 Identities=13% Similarity=0.077 Sum_probs=289.6
Q ss_pred ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069 4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~ 83 (461)
.+.+|.+.|++.+++|+|..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++..++.++++++++++.+++.
T Consensus 23 ~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~- 101 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIA- 101 (394)
T ss_pred HHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH-
Confidence 3567889999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHHHHHHHhh
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLSAVLFGIL 161 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~~~i~~~~ 161 (461)
|++.|++.+...+.....+.+++| |+|++++++..++.++|..++|++.+.+.. ..|||+.|.+.+++.++..++.++
T Consensus 102 ~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK03699 102 MFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF 181 (394)
T ss_pred HHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999888888888888886 679999999999999999999999988875 469999999988887766554433
Q ss_pred cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
. +.++ +++++++ +++
T Consensus 182 ~-~~p~-~~~~~~~-----------------------------------------------------------~~~---- 196 (394)
T PRK03699 182 S-EFPA-LGKHAPK-----------------------------------------------------------ADK---- 196 (394)
T ss_pred c-CCcc-ccccCcc-----------------------------------------------------------ccC----
Confidence 2 2111 1100000 000
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVIL 320 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~ 320 (461)
... +...++.++...+..++.....+.+..|+|.|+ +++|+++.+.+.+.+...++..+++++.
T Consensus 197 ---------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 261 (394)
T PRK03699 197 ---------PVA------KEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIF 261 (394)
T ss_pred ---------ccc------cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHH
Confidence 000 011245667777777777777778889999999 6679999999999999999999999999
Q ss_pred hhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069 321 GYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400 (461)
Q Consensus 321 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 400 (461)
|+++||+++++... ....+..+..+++...++.+...+..++.|++.+..++...+...+..| +++++..+......
T Consensus 262 g~l~dr~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 338 (394)
T PRK03699 262 SFIVRFFDLQRILT--VLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCG 338 (394)
T ss_pred HHHHHHhchhhHHH--HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhh
Confidence 99999976655433 3333334444444455666666667788898888888887777777776 55678889999999
Q ss_pred HhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHhhhh
Q psy15069 401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLKRK 453 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 453 (461)
++|..++|.+.|++.|..| ++..++..+++++++.+++....+..||+++..
T Consensus 339 ~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (394)
T PRK03699 339 TIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILLGFVSKHRQHGA 390 (394)
T ss_pred hHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999875 889999988888888888888877777665543
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.8e-34 Score=282.37 Aligned_cols=344 Identities=17% Similarity=0.199 Sum_probs=273.3
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTG 88 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G 88 (461)
.+.|++.+++|.++++.|+..+++.++..+++++.|++.||+|||+++..+.++.+++.++++++++++.+++. |+++|
T Consensus 41 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l~G 119 (394)
T PRK10213 41 SLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIG-RACLG 119 (394)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHH-HHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999985 99999
Q ss_pred ccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069 89 LGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEE 167 (461)
Q Consensus 89 ~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~ 167 (461)
++.+...+....++.+++| |+|++++++..++.++|.+++|++++.+.+.+|||+.|++.++++++..+..+...|++
T Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~- 198 (394)
T PRK10213 120 LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL- 198 (394)
T ss_pred HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC-
Confidence 9999989999999999995 88999999999999999999999999999999999999998877665443333222321
Q ss_pred CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069 168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD 247 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (461)
+++++ +
T Consensus 199 -~~~~~-------------------------------------------------------------------------~ 204 (394)
T PRK10213 199 -PGEPS-------------------------------------------------------------------------H 204 (394)
T ss_pred -Ccccc-------------------------------------------------------------------------c
Confidence 11000 0
Q ss_pred hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhH-hhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069 248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYI-VKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR 326 (461)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 326 (461)
.. +.. .+.+|+|.++...+..++.....+....+. |.+.++.|+++.+.+.++...+++.++++++.+++.||
T Consensus 205 ~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r 278 (394)
T PRK10213 205 QK-QNT-----FRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR 278 (394)
T ss_pred ch-hHH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 111 135788888887776666666666666676 56668889999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh
Q psy15069 327 PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV 406 (461)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 406 (461)
. +++.+.....+.....+++....++.+.+....++.|++.+...+...+.+.+..| ++.++..++.....++|..+
T Consensus 279 ~--~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~ 355 (394)
T PRK10213 279 S--VKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTC 355 (394)
T ss_pred c--chhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHH
Confidence 3 33332222232233333333445567777778889999999888888888888887 55778888888888999999
Q ss_pred ccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069 407 GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 407 gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~ 438 (461)
||.++|+++|..| +...++..+++.++..+.
T Consensus 356 G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 356 GAAIGGYALDNIG-LTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHHHHHhccC-hhhHHHHHHHHHHHHHHH
Confidence 9999999999875 777777766655554433
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=3.6e-34 Score=280.90 Aligned_cols=353 Identities=16% Similarity=0.181 Sum_probs=265.8
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
.+...+|.+++|+|.+.++.|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+++++++|++.+++. |+
T Consensus 21 ~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~-r~ 99 (382)
T PRK10091 21 GIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIG-RL 99 (382)
T ss_pred HHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH-HH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999985 99
Q ss_pred cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
+.|++.+...+.....+.++++ ++|++++++...+..+|..++|++++.+.+.+|||++|++.+++.++..+..++..|
T Consensus 100 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 100 VSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999888877788889985 679999999999999999999999999999899999999999887766655444444
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
+.++++ +
T Consensus 180 ~~~~~~----~--------------------------------------------------------------------- 186 (382)
T PRK10091 180 DIRDEA----K--------------------------------------------------------------------- 186 (382)
T ss_pred CCCccc----c---------------------------------------------------------------------
Confidence 321000 0
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
.+.++.. +.+|++..|...+..++.+........+++.++ +..|.++.+.+++.+..+++.++++++.|++
T Consensus 187 --~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l 258 (382)
T PRK10091 187 --GGLREQF------HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRL 258 (382)
T ss_pred --cCHHHHH------HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHhee
Confidence 0000111 236777777766665555555555566777777 5689999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHhhhhhhHHHHHH-HHHHHhcCccchhHHHHHHHHHHH
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAATVICA-FCYNYVELAIYAGVFGAMIGAYVGLTS-VILVDLLGLDRLTNAFGLLLLFQG 401 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~ 401 (461)
.||+++++... .+..+.++..++.. ..++.+...+..++.+++.....+... ....+..+++.++.+ ..+....
T Consensus 259 ~~r~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 334 (382)
T PRK10091 259 SGRYSPLRIAA--VTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFN 334 (382)
T ss_pred ccccCchhHHH--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHH
Confidence 99976554433 33344444433332 234444444555555665443333333 334444444544443 4467788
Q ss_pred hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
+|.++||.++|++.|..++|+..+...+++.++.........+
T Consensus 335 ~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 335 LGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred HHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998778999999887776666554444333
No 18
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=5e-35 Score=294.33 Aligned_cols=366 Identities=14% Similarity=0.101 Sum_probs=266.2
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
++++.+.|.+.+++|++..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++++++.++++++++++.++++ |
T Consensus 53 ~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~-r 131 (476)
T PLN00028 53 FAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAV-R 131 (476)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-H
Confidence 456678899999999999999999999999999999999999999999999999999999999999999999988875 8
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH----H-----hhchhHHHHHHHHHHHH
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV----R-----EYGWKITLLVLSVTVLS 154 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~----~-----~~gw~~~f~i~~~~~l~ 154 (461)
++.|++.+.. .+....+.+|+| ++|++++|+..++.++|..+++.+...+. + ..|||++|++.++++++
T Consensus 132 ~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~ 210 (476)
T PLN00028 132 FFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHII 210 (476)
T ss_pred HHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHH
Confidence 9999988764 445567889995 78999999998766666666655554332 2 25899999999999887
Q ss_pred HHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCC
Q psy15069 155 AVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESE 234 (461)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (461)
..++.+++.+++ |+++ .+ +. ++ +
T Consensus 211 ~~l~~~~~~~~~--p~~~-~~-----~~--------------------------------------~~-----------~ 233 (476)
T PLN00028 211 MGILVLTLGQDL--PDGN-YR-----EL--------------------------------------KK-----------S 233 (476)
T ss_pred HHHHHHHHcCcC--CCCc-hh-----hH--------------------------------------Hh-----------c
Confidence 766655543322 1100 00 00 00 0
Q ss_pred CcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhh
Q psy15069 235 STEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAAN 313 (461)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~ 313 (461)
++.+ +.+.+... .+.++++++|.+.+.+++.....+.+..++|.|+ ++.|++..+++.+.++.+++.
T Consensus 234 ~~~~-------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~ 301 (476)
T PLN00028 234 GTMP-------KDSFSKVL-----RYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMN 301 (476)
T ss_pred Cccc-------cccHHHHH-----HHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 0000 00001111 1347788888888777766666666778899998 667999999999999999999
Q ss_pred hhhhhhhhhccCCCCcc-----hhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc
Q psy15069 314 MVSRVILGYISDRPCVN-----RLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR 388 (461)
Q Consensus 314 ~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 388 (461)
+++++++|+++||+++| |+........+.++..+++...++.+...+.+++++++.+...+...++..+.. +++
T Consensus 302 ~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~ 380 (476)
T PLN00028 302 LFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRS 380 (476)
T ss_pred HHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhh
Confidence 99999999999997654 333433444444444444455555555555666677766655555666666654 478
Q ss_pred hhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 389 LTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
+|++.|+.+....+|++++|.+.+ .+..++|...|++.+++.+++.++.++++.
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHheec
Confidence 999999988877777777776643 223457999999999888888888777653
No 19
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.1e-34 Score=283.86 Aligned_cols=362 Identities=15% Similarity=0.139 Sum_probs=271.7
Q ss_pred ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069 4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~ 83 (461)
.+.++...|.+++++|.+..+.|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.++.+++++++.+++.
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 89 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAAL- 89 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHH-
Confidence 3567788999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhH-HHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAP-IIDYTVREYGWKITLLVLSVTVLSAVLFGIL 161 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~-l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~ 161 (461)
|++.|++.+...+...+++.+++| ++|++++++...+..+|..++|+ +...+.+..|||+.|++.+++.++..+..++
T Consensus 90 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 90 WALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhe
Confidence 899999999999999999999995 78999999999999999999995 6666667789999999998887776655555
Q ss_pred cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
+.++++.+++.++.++..++ +.+ + .++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~----~---~~~~~~~--- 200 (379)
T TIGR00881 170 LLRDSPQSCGLPPAEEMPNE---------------------------------------EPD----G---DAEKKEE--- 200 (379)
T ss_pred eeCCCccccccCccccCccc---------------------------------------ccc----c---ccccccc---
Confidence 54433221100000000000 000 0 0000000
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVIL 320 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~ 320 (461)
+.+..+.. ....+|+|.+|.+.+..++.......+..+.|.|+ ++.|+++.+.+...+...++.++++++.
T Consensus 201 ---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 272 (379)
T TIGR00881 201 ---ELTKKQIF-----LQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLA 272 (379)
T ss_pred ---cccchHHH-----HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHH
Confidence 00000111 12457889999888888888888888888999998 6679999999999999999999999999
Q ss_pred hhccCCCCcchhHHH-HHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069 321 GYISDRPCVNRLYIY-NGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL 397 (461)
Q Consensus 321 g~l~dr~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 397 (461)
|++.||...+++... ........+.+..... ..+.+...+..++.|++.....+....+..|.+|+++|+++.|+.+
T Consensus 273 g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 352 (379)
T TIGR00881 273 GWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVG 352 (379)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHH
Confidence 999997533333322 2222222222222222 2244445555666776655556666778899999999999999999
Q ss_pred HHHHhhhhhccceeeeeecccCCchHH
Q psy15069 398 LFQGIASLVGPPIAGFLYDSTLSYSPA 424 (461)
Q Consensus 398 ~~~~~g~~~gp~i~g~l~~~~g~~~~~ 424 (461)
....+|+.++|.+.|.+.|+.| |+..
T Consensus 353 ~~~~~g~~~~~~~~g~l~~~~g-~~~~ 378 (379)
T TIGR00881 353 FFAYLGGILAGLPLGYLADGFG-WAGA 378 (379)
T ss_pred HhhhhhhhhhhhhHHHHHHhhc-cccc
Confidence 9999999999999999999875 7654
No 20
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=5.2e-35 Score=294.46 Aligned_cols=366 Identities=14% Similarity=0.111 Sum_probs=270.4
Q ss_pred HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc--cchhhHHHHhhcccccccccc
Q psy15069 17 VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA--KNVITLCITIGFGTGLGFGLI 94 (461)
Q Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~--~~~~~l~i~~~~l~G~g~~~~ 94 (461)
|++++..+.|++.+.+.+++.+++++.|++.||+|+|+++..+.++++++.+++.++ .+++.+++ .|+++|++.+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~~~G~~~~~~ 148 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVF-CRVIQGLAQGSV 148 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHH-HHHHHHHhcccc
Confidence 789999999999999999999999999999999999999999999999998886543 56777776 599999999999
Q ss_pred chhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15069 95 YLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEE 172 (461)
Q Consensus 95 ~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~ 172 (461)
++....++.+|+| ++|++++++..++..+|.+++|++.+.+.+.+ |||++|++.++.+++..++.+++.+++| +++
T Consensus 149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p--~~~ 226 (465)
T TIGR00894 149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDP--SIH 226 (465)
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCc--ccC
Confidence 9999999999996 89999999999999999999999999999884 9999999999988777666555544322 211
Q ss_pred cccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhh
Q psy15069 173 PVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQT 252 (461)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (461)
+.. +.. |.+...+. .+++++ +.+.+..
T Consensus 227 ~~~-~~~------------~~~~i~~~--------------------------------~~~~~~--------~~~~~~~ 253 (465)
T TIGR00894 227 PCI-SKF------------EKKYINSS--------------------------------LQGQKG--------STRQSLP 253 (465)
T ss_pred CCC-CHH------------HHHHHHhh--------------------------------cccccC--------CCCCCCC
Confidence 100 000 00000000 000000 0000011
Q ss_pred HhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcch
Q psy15069 253 LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNR 331 (461)
Q Consensus 253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 331 (461)
. ++++++|.+|...+..++.+...+.+..|+|.|+ +.+|.+..+.++..+...++.+++.++.|+++||.++++
T Consensus 254 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~ 328 (465)
T TIGR00894 254 I-----KAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSK 328 (465)
T ss_pred H-----HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1 2468899999999999999999999999999999 668999999999999999999999999999999854332
Q ss_pred h--------HHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHh
Q psy15069 332 L--------YIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGI 402 (461)
Q Consensus 332 ~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 402 (461)
. .....+....++..+.... ..+.+..++..++.+.+.+...+.......+..| +.+|.+.|+.+..+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l 407 (465)
T TIGR00894 329 TLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFI 407 (465)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHH
Confidence 1 1111111111222222222 2234444444555555555555555555667776 5899999999999999
Q ss_pred hhhhccceeeeeeccc--CCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 403 ASLVGPPIAGFLYDST--LSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 403 g~~~gp~i~g~l~~~~--g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
+++++|.+.|.+.|.. ++|...|.+.++..+++.++.....+
T Consensus 408 ~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 408 GGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred HHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 9999999999999864 45889999998888888776655433
No 21
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.8e-34 Score=288.74 Aligned_cols=375 Identities=14% Similarity=0.145 Sum_probs=256.9
Q ss_pred eeeeehHHHHhHhcCCCcc-HHH-----HHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhh-
Q psy15069 6 SFGILFIEFTKVFQEGDGV-TSW-----IASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVIT- 78 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~-----~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~- 78 (461)
.++...|.+.++++.+... .++ ++++..+++.+++++.|++.||+|||+++..+.++++++.+++++++|++.
T Consensus 34 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~ 113 (490)
T PRK10642 34 VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATI 113 (490)
T ss_pred HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 3567788899998755433 233 257778899999999999999999999999999999999999999999875
Q ss_pred ------HHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------HhhchhH
Q psy15069 79 ------LCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYGWKI 143 (461)
Q Consensus 79 ------l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~gw~~ 143 (461)
+++..|+++|+|.|..++....++.+|+| |+||++.++...+..+|.++++.+...+. ..+|||+
T Consensus 114 g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~ 193 (490)
T PRK10642 114 GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRI 193 (490)
T ss_pred HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHH
Confidence 23346999999999999999999999995 88999999999888888888876665443 2579999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccc
Q psy15069 144 TLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQ 223 (461)
Q Consensus 144 ~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (461)
+|++.+++.++..++ ....|+ +|++++.+++..+ . +
T Consensus 194 ~f~i~~~~~l~~~~~-~~~~~e--sp~~~~~~~~~~~------------------~-----------------------~ 229 (490)
T PRK10642 194 PFFIALPLGIIGLYL-RHALEE--TPAFQQHVDKLEQ------------------G-----------------------D 229 (490)
T ss_pred HHHHHHHHHHHHHHH-HHcCCC--ChhHHHHHHhhhh------------------h-----------------------c
Confidence 999876555433322 222222 2321100000000 0 0
Q ss_pred ccccCCCCCCCCcccccccccCCchhhhhHhhhhcccccc-chhHHH-HHHHHHHHhhccccchhhHhhHH-HHhCCCch
Q psy15069 224 IDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLR-DPIFIL-FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRS 300 (461)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~ 300 (461)
+++.. +..+.+..+ +++ +++.+. .....++....++.+..|+|.|+ ++.|++..
T Consensus 230 ---------~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 286 (490)
T PRK10642 230 ---------REGLQ---------DGPKVSFKE-----IATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSED 286 (490)
T ss_pred ---------ccccc---------ccccCCHHH-----HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 00000 000011111 121 222222 22333445667788889999999 56799988
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy15069 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL-AICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVI 379 (461)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 379 (461)
+.++......++.+++.++.|+++||+|+|+........ .+.++..+.....++...+++..++.|++.+...+....+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 366 (490)
T PRK10642 287 HGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMAST 366 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888899999999999999998766543322111 1111211222223345555666677777777666777778
Q ss_pred HHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069 380 LVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS 447 (461)
Q Consensus 380 ~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~ 447 (461)
+.+.+|++.|+++.|+.+....+++.++|.+.|++.+..++|...+++..+..+++.+..+++++.++
T Consensus 367 ~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 367 LPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred HHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence 88999999999999986666777788999999999987777776666666666666666666665544
No 22
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=3.3e-33 Score=277.46 Aligned_cols=359 Identities=12% Similarity=0.083 Sum_probs=270.1
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc-----ccchhhHHHH
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF-----AKNVITLCIT 82 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~-----~~~~~~l~i~ 82 (461)
.+..|.+.++++.+..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++.++ .++++.+++
T Consensus 37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 115 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYL- 115 (417)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHH-
Confidence 35678889999999999999999999999999999999999999999999998888887765432 567777776
Q ss_pred hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069 83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL 161 (461)
Q Consensus 83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~ 161 (461)
.|++.|++.+...++..+.+.+++| ++|++++++...+.++|..++|++++.+.+..||++.|++.++..++..++.+.
T Consensus 116 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 116 LGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 4899999988877888888889884 778999999999999999999999999999899999999887776665544433
Q ss_pred cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
. |+.+.++ +++ +++
T Consensus 196 l-~~~~~~~--~~~----------------------------------------------------------~~~----- 209 (417)
T PRK10489 196 L-PALPPPP--QPR----------------------------------------------------------EHP----- 209 (417)
T ss_pred C-CCCCCCC--ccc----------------------------------------------------------ccc-----
Confidence 3 3221110 000 000
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVIL 320 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~ 320 (461)
.++.++..+ ..+++|.++...+..++... ...+..+.|.|.++ .|.++.+.+++.+...++.+++.++.
T Consensus 210 ----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~ 279 (417)
T PRK10489 210 ----LRSLLAGFR-----FLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTS 279 (417)
T ss_pred ----hHHHHHHHH-----HHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHH
Confidence 000111111 24677776655544443332 34566788999966 89999999999999999999999999
Q ss_pred hhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069 321 GYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400 (461)
Q Consensus 321 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 400 (461)
+++.||.+ ++..+..+.++.++..+++.+.++.+...+..+++|++.+...+...+++.+..|++.||++.|+.+...
T Consensus 280 ~~l~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 357 (417)
T PRK10489 280 GWLAHSAR--PGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQN 357 (417)
T ss_pred HHhhhccC--cchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 99999843 3222334444555555555566677667777888898888777888888999999999999999999999
Q ss_pred HhhhhhccceeeeeecccCCchHHHHHHhHHHHHH-HHHHHHHHHhh
Q psy15069 401 GIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVS-GVMLFVIPSLQ 446 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~-~~~~~~~~~~~ 446 (461)
.+|..+||.+.|++.|..| +...++..+++.++. .+....+++.+
T Consensus 358 ~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 358 VTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVLGELR 403 (417)
T ss_pred hhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999876 666666666555544 44444444433
No 23
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.2e-33 Score=280.28 Aligned_cols=381 Identities=15% Similarity=0.148 Sum_probs=268.5
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc----cchhhHHH
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA----KNVITLCI 81 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~----~~~~~l~i 81 (461)
.++...|.+++ +|.++++.+++.+++.++..+++++.|++.||+|||+++..+.++.+++.++.++. ++++.+++
T Consensus 45 ~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 123 (438)
T TIGR00712 45 NFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFV 123 (438)
T ss_pred cHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHH
Confidence 34556676665 69999999999999999999999999999999999999999999999998887664 45666665
Q ss_pred HhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHHHHHHH
Q psy15069 82 TIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLSAVLFG 159 (461)
Q Consensus 82 ~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~~~i~~ 159 (461)
.|++.|++.+..+++....+.+++| |+|++++++.+++.++|..+++++.+...+ ..|||+.|++.++++++..+..
T Consensus 124 -~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 124 -LLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFA 202 (438)
T ss_pred -HHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 4899999999888888888899995 789999999999999999999998887555 4699999999999888766655
Q ss_pred hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
+++.++++...+ .++.+..+ +|. +++. .+++++
T Consensus 203 ~~~~~~~~~~~~-~~~~~~~~------~~~-----------------------------~~~~--------~~~~~~--- 235 (438)
T TIGR00712 203 FAMMRDTPQSCG-LPPIEEYR------NDY-----------------------------PDDY--------NEKAEQ--- 235 (438)
T ss_pred HHhccCCHHhcC-CCCchhcc------ccc-----------------------------cccc--------cccccc---
Confidence 555444321110 00000000 000 0000 000000
Q ss_pred cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhh
Q psy15069 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRV 318 (461)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~ 318 (461)
+. +.++......+|++.+|...+..++.+...+....++|.|+++ .|+++.+.++......+.++++++
T Consensus 236 ------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 305 (438)
T TIGR00712 236 ------EL----TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTL 305 (438)
T ss_pred ------cc----chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHH
Confidence 00 0111111236789999998888888777778888999999954 699999999999999999999999
Q ss_pred hhhhccCCCCcchhHHHHHHHH-HHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069 319 ILGYISDRPCVNRLYIYNGCLA-ICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395 (461)
Q Consensus 319 ~~g~l~dr~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 395 (461)
+.|+++||++++++........ ...+..+.+.. ..+.+......++.|++.............|.+|+++|+++.|+
T Consensus 306 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 385 (438)
T TIGR00712 306 LCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF 385 (438)
T ss_pred HHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhh
Confidence 9999999975444333221111 11111121111 12333333344455544322222223457799999999999999
Q ss_pred HHHHHHhhh-hhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069 396 LLLFQGIAS-LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 396 ~~~~~~~g~-~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~ 446 (461)
.+....+++ ++||.+.|.+.|+.| |+..|++..++.+++.+..+.+.+.+
T Consensus 386 ~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 386 TGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred hchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999888875 689999999999876 99999888887777776665544433
No 24
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=6.2e-34 Score=283.57 Aligned_cols=347 Identities=17% Similarity=0.148 Sum_probs=247.1
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
.+...|.+++++|.|+.+.+++.+++.+++.+++++.|++.||+|||+++..+.++.+++.++++++++++.+++. |++
T Consensus 37 ~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-r~l 115 (426)
T PRK12307 37 IFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLS-RFI 115 (426)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHH
Confidence 3456788999999999999999999999999999999999999999999999999999999999999999999985 999
Q ss_pred ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
.|++.+..++....++.+++| |+|++++++...+.++|.++++.+...+.+.+|||++|++.....++ .+ ++..+.
T Consensus 116 ~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~--~~~~~~ 192 (426)
T PRK12307 116 VGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VI--YIRARA 192 (426)
T ss_pred HHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HH--HHHHHC
Confidence 999999989988888999985 77999999999999999999999999998889999999874433222 11 111111
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
++++++++++.+ . ++ +++++ +
T Consensus 193 p~~~~~~~~~~~---------------------~---------------------~~---------~~~~~-~------- 213 (426)
T PRK12307 193 PESKEWEEAKLS---------------------G---------------------KG---------KHSQS-A------- 213 (426)
T ss_pred CCChHHHHhhhh---------------------c---------------------cc---------ccccc-c-------
Confidence 111110000000 0 00 00000 0
Q ss_pred CchhhhhHhhhhccccccchhHHHHHHH---HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 246 SDDTKQTLREMLDMELLRDPIFILFTIS---NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
....+... ++.+|+|.++...+. .++.....+.+..++|.|+++.|.++.+.+.+.+...++.++++++.|+
T Consensus 214 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~ 288 (426)
T PRK12307 214 WSVFSLSM-----KGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGL 288 (426)
T ss_pred hhhhhHHH-----HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111 134666666543322 2223333445677899999888999999999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069 323 ISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAM--IGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400 (461)
Q Consensus 323 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 400 (461)
+.||+++++... .+.++..+..+.....++.....+..+++|++ .....+..+.++.|.+|+++++++.|+.+...
T Consensus 289 l~dr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 366 (426)
T PRK12307 289 CADRIGLKKTFS--IGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLA 366 (426)
T ss_pred HHHHhccHHHHH--HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHH
Confidence 999976554433 33333333333222222111122222333332 22334566677899999999999999999999
Q ss_pred HhhhhhccceeeeeecccCCchHH
Q psy15069 401 GIASLVGPPIAGFLYDSTLSYSPA 424 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~~~g~~~~~ 424 (461)
.+++.++|.+.|++.|+.| +...
T Consensus 367 ~~~~~~gp~~~g~l~~~~g-~~~~ 389 (426)
T PRK12307 367 ATSGTFNSMAATWLGITMG-LGAA 389 (426)
T ss_pred hHHHHHHHHHHHHHHHccc-HHHH
Confidence 9999999999999999875 5443
No 25
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=2.6e-33 Score=272.26 Aligned_cols=336 Identities=15% Similarity=0.116 Sum_probs=260.5
Q ss_pred ceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069 4 TYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~ 83 (461)
..+++.++|++++++|.|..+.|++.+++.+++.+++++.|++.||+|+|+++..+.++..++.+.+ .+++++.+++ .
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~-~ 93 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFA-G 93 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHH-H
Confidence 3578899999999999999999999999999999999999999999999999999999988888877 7788888876 4
Q ss_pred hccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh--chhHHHHHHHHHHHHHHHHHhh
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY--GWKITLLVLSVTVLSAVLFGIL 161 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~--gw~~~f~i~~~~~l~~~i~~~~ 161 (461)
|++.|+|.+...+.....+.++++++|++++++...+.++|..+++++.+.+.+.. +||+.|.+.++..++....
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~--- 170 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA--- 170 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---
Confidence 89999999887777777888999999999999999999999999999999888765 3999998877655443221
Q ss_pred cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
+.|+.+.+++ +++ +.
T Consensus 171 ~~~~~~~~~~-~~~----------------------------------------------------------~~------ 185 (355)
T TIGR00896 171 WIPQVRRRVA-ANQ----------------------------------------------------------TT------ 185 (355)
T ss_pred HhhhhccccC-CCC----------------------------------------------------------CC------
Confidence 2222111100 000 00
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILG 321 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g 321 (461)
. +. ..++.+|+|.+|.+.+..++....++....++|.|+++.|.+..+.+.+.+...++.++++++.|
T Consensus 186 -----~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g 253 (355)
T TIGR00896 186 -----T--RL-----TPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIP 253 (355)
T ss_pred -----C--CC-----CCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHH
Confidence 0 00 01235788888877777777777777888899999988999999999999999999999999999
Q ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHH
Q psy15069 322 YISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQ 400 (461)
Q Consensus 322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 400 (461)
++.||++.+|..+ ..+..+.+++...+.+.++.... ...+++|++.+..++.....+.+..+ ++++++..++.+...
T Consensus 254 ~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 331 (355)
T TIGR00896 254 ALARRVKDQRGIV-AVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIG 331 (355)
T ss_pred HHHhhhccchHHH-HHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 9999974444332 23344444444444443332222 24567899999888887776665554 567789999999999
Q ss_pred HhhhhhccceeeeeecccCCchH
Q psy15069 401 GIASLVGPPIAGFLYDSTLSYSP 423 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~~~g~~~~ 423 (461)
+++.+++|.+.|++.|++|+|.+
T Consensus 332 ~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 332 YLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999988764
No 26
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1e-32 Score=272.34 Aligned_cols=356 Identities=17% Similarity=0.145 Sum_probs=263.6
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hcc-cchhhHHHHhhc
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFA-KNVITLCITIGF 85 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~-~~~~~l~i~~~~ 85 (461)
+.|++.+|+|.++++.|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.+++ ++. ++++.+++ .|+
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 113 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILL-FYG 113 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHH-HHH
Confidence 5677889999999999999999999999999999999999999999999999999887654 343 56777776 489
Q ss_pred cccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhH-HHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGT-IIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~-~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
+.|+|.+...+.....+.+++ +|+|++++|+.+++.++|. +++|++++.+.+.+||+..++......++..+...++.
T Consensus 114 i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 193 (402)
T TIGR00897 114 IRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSN 193 (402)
T ss_pred HHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhcc
Confidence 999998877766666666766 6899999999999999996 57899999988888977665544443333333333333
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
++++.++++++ +++
T Consensus 194 ~~~~~~~~~~~-----------------------------------------------------------~~~------- 207 (402)
T TIGR00897 194 KDIFTPQHMQT-----------------------------------------------------------REK------- 207 (402)
T ss_pred CCCCCcccccC-----------------------------------------------------------Ccc-------
Confidence 32211110000 000
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
.++.++..+ .++|+|.++...+..++.....+.+.++.|.|+++.|++..+.+.+.+...++.++++++.|++
T Consensus 208 --~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l 280 (402)
T TIGR00897 208 --FSELGKAAT-----ILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIV 280 (402)
T ss_pred --hhhHHHHHH-----HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111 3678999998888888888888888999999998899999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHH---HHHhh--hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAA---TVICA--FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL 398 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 398 (461)
+||+++++.... .+.+..++. +...+ ..++.+..++..++.|++.+...+. ...+.+..| ++|++++|+.+.
T Consensus 281 ~dr~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~ 357 (402)
T TIGR00897 281 GDKLGWMNTVRW-FGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNL 357 (402)
T ss_pred HHhhcchhHHHH-HHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHH
Confidence 999875554321 222222222 21111 1234556666778888887766554 345566654 689999999999
Q ss_pred HHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 399 FQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 399 ~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
...+|+.++|.+.|.+.|..| |...+++.+++.+++.++..+++
T Consensus 358 ~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 358 SAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999886 88888888888887777665543
No 27
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.7e-33 Score=278.11 Aligned_cols=367 Identities=16% Similarity=0.205 Sum_probs=261.2
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
.++.+.|++++++|.+..+.+++.+++.++..+++++.|.+.||+|||+++..+.++.+++.++++++++++.+++. |+
T Consensus 30 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 108 (405)
T TIGR00891 30 LVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIA-RL 108 (405)
T ss_pred HHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999885 89
Q ss_pred cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHhhc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG--WKITLLVLSVTVLSAVLFGILL 162 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g--w~~~f~i~~~~~l~~~i~~~~~ 162 (461)
+.|++.+..++.....+.+++| ++|++++++.+++.++|.++++.+.+.+.+..| ||+.|++.++..++..+. ...
T Consensus 109 l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~-~~~ 187 (405)
T TIGR00891 109 VIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWL-RKN 187 (405)
T ss_pred HHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH-HHh
Confidence 9999999999999899999985 889999999999999999999999999988776 999998765554443322 222
Q ss_pred ccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069 163 RPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC 242 (461)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (461)
.|+++..++ +++++ ++ ..++.++. .+ +++..+.
T Consensus 188 ~~~~~~~~~-~~~~~---~~------~~~~~~~~------------------------------~~-----~~~~~~~-- 220 (405)
T TIGR00891 188 IPEAEDWKE-KHAGK---AL------VRTMVDIL------------------------------YG-----GEHRIAN-- 220 (405)
T ss_pred CCCChhHHH-Hhhhh---hh------hhhHHHHH------------------------------hc-----cchhhhh--
Confidence 232211110 00000 00 00000000 00 0000000
Q ss_pred ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069 243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILG 321 (461)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g 321 (461)
..++.....++ ....+.+.+..+.+...+.+........++|.|+ ++.|++..+.+.+.+...++.++++++.|
T Consensus 221 --~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g 295 (405)
T TIGR00891 221 --IVMTLAAAMVQ---SAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFG 295 (405)
T ss_pred --hhhhhhHHhhh---hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 0001111233333333444444556667889888 67899999999999999999999999999
Q ss_pred hccCCCCcchhHHHHHHHHHHHHH-HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069 322 YISDRPCVNRLYIYNGCLAICGAA-TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400 (461)
Q Consensus 322 ~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 400 (461)
++.||+++++... .+....++. .......++.+.+.+..++.+++.+...+..+.++.|.+|+++|+++.|+.+...
T Consensus 296 ~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 373 (405)
T TIGR00891 296 FLGDWLGRRKAYV--CSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLG 373 (405)
T ss_pred HHHHHhCchhhhH--HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHH
Confidence 9999976555433 233332222 2222233455555555566777766677778888999999999999999999999
Q ss_pred HhhhhhccceeeeeecccCCchHHHHHH
Q psy15069 401 GIASLVGPPIAGFLYDSTLSYSPAFFLA 428 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~~~g~~~~~f~~~ 428 (461)
.+|..++|++.|.+.|+.|+|+..+...
T Consensus 374 ~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 374 NLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 9999999999999999998888776553
No 28
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=8.4e-33 Score=272.41 Aligned_cols=349 Identities=14% Similarity=0.133 Sum_probs=266.9
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
++++.+++++++|.|..++|++.++..+...+.+++.|++.||+|||+++..+.++..++.+++.+++++|.+++. |++
T Consensus 30 ~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l 108 (400)
T PRK11646 30 FPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLS-CIL 108 (400)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHH
Confidence 3444556788999999999999999999999999999999999999999999999999999999999999998875 899
Q ss_pred ccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
.|++.+...++..+.+.+++ +++|++++|+.....++|..++|++++.+. .+|||+.|++.++.+++..++..+..|+
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 109 SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999888888888889988 589999999999999999999999999998 7899999999888877665554444432
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
++ ++ +.+
T Consensus 188 ~~-~~--~~~---------------------------------------------------------------------- 194 (400)
T PRK11646 188 YK-LS--TVR---------------------------------------------------------------------- 194 (400)
T ss_pred cc-cc--ccc----------------------------------------------------------------------
Confidence 11 00 000
Q ss_pred CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069 246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD 325 (461)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d 325 (461)
++.++..+ +.+++|.++...+..+...........++|.|+++.+.++.+.+++.+..++....+....+++.|
T Consensus 195 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 268 (400)
T PRK11646 195 -TPVREGMT-----RVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSE 268 (400)
T ss_pred -hhhHHHHH-----HHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111 346778777655554443333333456789998777668888999888888777766666667776
Q ss_pred C-CCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhh
Q psy15069 326 R-PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS 404 (461)
Q Consensus 326 r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 404 (461)
| ++.++. +..++.+.++..+++.+.++.+.+.+..++++++.+...|...+++.+..|++++|+++|+.+...++|.
T Consensus 269 ~r~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 346 (400)
T PRK11646 269 KRFRLEHR--LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGG 346 (400)
T ss_pred HhcchhHH--HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHH
Confidence 5 322332 2345555556665666667776666667788888888888888999999999999999999999999999
Q ss_pred hhccceeeeeecccCC---chHHHHHHhHHHHHHHHH
Q psy15069 405 LVGPPIAGFLYDSTLS---YSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 405 ~~gp~i~g~l~~~~g~---~~~~f~~~~~~~l~~~~~ 438 (461)
.+||.++|++.|+.++ ....+...+++.+++.+.
T Consensus 347 ~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 347 AIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999998643 345666555555555444
No 29
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1.7e-32 Score=271.34 Aligned_cols=338 Identities=11% Similarity=0.028 Sum_probs=261.4
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
+...+|.+++++|.|..+.++..+.+.+++.+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |++
T Consensus 32 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l 110 (406)
T PRK15402 32 IQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLL-RFL 110 (406)
T ss_pred HhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HHH
Confidence 3356788999999999999999999999999999999999999999999999999999999999999999998875 899
Q ss_pred ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
.|++.+...+.....+.+++| ++|.+++++......+|..++|++++.+.+..|||+.|++.++++++..+..++..|+
T Consensus 111 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 111 QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999998888888888899995 6788889999888889999999999999998999999999888887766555444443
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
++.+++ + +++
T Consensus 191 ~~~~~~--~-----------------------------------------------------------~~~--------- 200 (406)
T PRK15402 191 TAGRVG--E-----------------------------------------------------------KLS--------- 200 (406)
T ss_pred CCcccc--c-----------------------------------------------------------ccc---------
Confidence 211100 0 000
Q ss_pred CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069 246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYIS 324 (461)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 324 (461)
.++.+... +.++++|.++...+..++..........+.|.++ ++.|.++.+.++......++.++++++.|++.
T Consensus 201 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~ 275 (406)
T PRK15402 201 LKELGRDY-----KLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLT 275 (406)
T ss_pred HHHHHHHH-----HHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111 2467889888877777766666666667788887 67899999999888888888999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069 325 DRPCVNRLYIYNGCLAICGAATVICAF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF 399 (461)
Q Consensus 325 dr~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 399 (461)
||+++++... .+.++..++..+... ..+.+++.+..+++|++.+...+......... +++++|++.+..+..
T Consensus 276 ~r~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~ 352 (406)
T PRK15402 276 SRRPLRSLIR--MGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGML 352 (406)
T ss_pred HhcCHHHHHH--HHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHH
Confidence 9975544333 333333333333222 23455666777888888887776665555444 448899999999999
Q ss_pred HHhhhhhccceeeeeecccCCchH
Q psy15069 400 QGIASLVGPPIAGFLYDSTLSYSP 423 (461)
Q Consensus 400 ~~~g~~~gp~i~g~l~~~~g~~~~ 423 (461)
..++..+|+.+.+++++..+.+..
T Consensus 353 ~~~~~~~g~~~~~~l~~~~~~~~~ 376 (406)
T PRK15402 353 SMLIFTVGIELSKHAYLGGGNGLF 376 (406)
T ss_pred HHHHHHHHHHHHHhcccCCchHHH
Confidence 999999999999999998774443
No 30
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.1e-33 Score=290.09 Aligned_cols=416 Identities=13% Similarity=0.119 Sum_probs=282.4
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
.+..+|.+.++++++..+.+++.+++.+++.+++++.|++.||+|||++++.++++.+++.++++++++++.+++. |++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~-R~l 264 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFC-RLL 264 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HHH
Confidence 5667899999999999999999999999999999999999999999999999999999999999999999999985 999
Q ss_pred ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh-------------chhHHHHHHHHHH
Q psy15069 87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------------GWKITLLVLSVTV 152 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------------gw~~~f~i~~~~~ 152 (461)
.|+|.+...+...+++.+++| ++|++++++..++..+|.++++.++..+...+ +||+.+++.++.+
T Consensus 265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ 344 (742)
T TIGR01299 265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC 344 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence 999999999999999999995 88999999999999999999999888776543 5888887776665
Q ss_pred HHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCC--cc--cCCcccc--ccc
Q psy15069 153 LSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGP--TE--VISTQAQ--IDS 226 (461)
Q Consensus 153 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~--~~~ 226 (461)
++.+++ +++.|+ +|++...+ ..++|.....+.....+.+....+.+. .+ +.+++.+ .+.
T Consensus 345 ll~ll~-~~~lPE--SPrwL~~~------------gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (742)
T TIGR01299 345 VFAIGA-LTFMPE--SPRFFLEN------------GKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEI 409 (742)
T ss_pred HHHHHH-HHHcCC--CHHHHHHC------------CCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcc
Confidence 554433 344443 33321000 000000000000000000000000000 00 0000000 000
Q ss_pred cCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh-----------
Q psy15069 227 KATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR----------- 295 (461)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 295 (461)
.+. +....++............+....+.+.++.. +..+++++..++..+++|++..|+|.++++.
T Consensus 410 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~--~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~ 486 (742)
T TIGR01299 410 ESD-TGTWYQRCFVRALSEGGGIWGNFLRCFNPEVR--EITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKN 486 (742)
T ss_pred ccc-ccchhhcchhhhhhhhhhHHHHHHHHcCccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 000 00000000000000000111123333332221 2346677778888999999999999886331
Q ss_pred -------------------------------CC-----C---------------c-------------------------
Q psy15069 296 -------------------------------GV-----T---------------R------------------------- 299 (461)
Q Consensus 296 -------------------------------g~-----s---------------~------------------------- 299 (461)
|+ + .
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 566 (742)
T TIGR01299 487 FPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKF 566 (742)
T ss_pred ccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhh
Confidence 00 0 0
Q ss_pred ----------------------------hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh
Q psy15069 300 ----------------------------SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF 351 (461)
Q Consensus 300 ----------------------------~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (461)
........+..++.+++.++.|+++||+|+|+. +..++++.+++.+++.+
T Consensus 567 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~--l~~~~~lsai~~ll~~~ 644 (742)
T TIGR01299 567 IDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM--LAGSMVLSCISCFFLSF 644 (742)
T ss_pred hhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHHH
Confidence 012333556678899999999999999765544 44667777777777777
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069 352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA 431 (461)
Q Consensus 352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~ 431 (461)
.++.+.++++.+++|++.++..+...++++|++|++.|++++|+.+....+|.++||+++|.+.+. +...+|++.+++
T Consensus 645 ~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~ 722 (742)
T TIGR01299 645 GNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAA 722 (742)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHH
Confidence 777667777777888888888888999999999999999999999999999999999999998875 367788888888
Q ss_pred HHHHHHHHHHHHHh
Q psy15069 432 IFVSGVMLFVIPSL 445 (461)
Q Consensus 432 ~l~~~~~~~~~~~~ 445 (461)
.++++++.+++|+.
T Consensus 723 lll~~ll~~~LPET 736 (742)
T TIGR01299 723 LACGGLLALKLPDT 736 (742)
T ss_pred HHHHHHHHHhCCCC
Confidence 88877777666543
No 31
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=7.8e-33 Score=269.37 Aligned_cols=338 Identities=14% Similarity=0.140 Sum_probs=269.8
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc-----chhhHHHH
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK-----NVITLCIT 82 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~-----~~~~l~i~ 82 (461)
.+.+|.+.++++.+..++|++.+++.++..+++++.|.+.||+|||+++..+.++.+++.++..+.+ +++.+++.
T Consensus 19 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (365)
T TIGR00900 19 QVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVL 98 (365)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999888887777 89998885
Q ss_pred hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069 83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL 161 (461)
Q Consensus 83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~ 161 (461)
|++.|++.+...++..+++.+++| ++|++++++...+.++|.+++|++++.+.+..|||+.|++.++..++..++.++
T Consensus 99 -~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 99 -AGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999995 789999999999999999999999999999999999999888776655544444
Q ss_pred cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
.++++ .+++++++ .+++.
T Consensus 178 ~~~~~-~~~~~~~~---------------------------------------------------------~~~~~---- 195 (365)
T TIGR00900 178 VRIPE-LAASEIQA---------------------------------------------------------LSNAV---- 195 (365)
T ss_pred ccccc-CCCccccc---------------------------------------------------------cchhH----
Confidence 33221 11100000 00000
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccch-hhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPY-VYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVI 319 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~ 319 (461)
.++.++..+ ..+|+|.++...+..++......... .+.|.+.++ .|.+..+.+.+.+...++.++++++
T Consensus 196 ----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (365)
T TIGR00900 196 ----LRDTREGIK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALL 266 (365)
T ss_pred ----HHHHHhHHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Confidence 000111111 35678888877777776666665555 788888854 8999999999999999999999999
Q ss_pred hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069 320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN-YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL 398 (461)
Q Consensus 320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 398 (461)
.+++.||.++++ ....+..+.++..+...+.++ .+...+..++.|++.+...+....++.|.+|+++|+++.|+.+.
T Consensus 267 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (365)
T TIGR00900 267 LGLLGRYFKRMA--LMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFS 344 (365)
T ss_pred HHHHHHHhchhH--HHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999964433 333445555555555555553 77777788899999999999999999999999999999999999
Q ss_pred HHHhhhhhccceeeeeecccC
Q psy15069 399 FQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 399 ~~~~g~~~gp~i~g~l~~~~g 419 (461)
...++..++|.+.|.+.|..|
T Consensus 345 ~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 345 LSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999998754
No 32
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.4e-32 Score=273.85 Aligned_cols=354 Identities=13% Similarity=0.104 Sum_probs=245.2
Q ss_pred eeeeehHHHHhHhc---CCCccHHH---HHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh--
Q psy15069 6 SFGILFIEFTKVFQ---EGDGVTSW---IASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI-- 77 (461)
Q Consensus 6 ~~~~~~~~~~~~~~---~~~~~~~~---~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~-- 77 (461)
.+++..|.+.++++ .+..+.+. +++...++..+++++.|++.||+|||+++..+.++++++.+++++++++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 119 (432)
T PRK10406 40 VYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETI 119 (432)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhH
Confidence 36778899999985 45554444 44444555569999999999999999999999999999999999998875
Q ss_pred ------hHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------Hhhchh
Q psy15069 78 ------TLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYGWK 142 (461)
Q Consensus 78 ------~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~gw~ 142 (461)
.+++ .|+++|+|.|..++...+++.|++| |+|+++.++.+.+...|.++++.+...+. +.+|||
T Consensus 120 ~~~~~~~l~~-~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr 198 (432)
T PRK10406 120 GTWAPALLLL-ARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWR 198 (432)
T ss_pred HHHHHHHHHH-HHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchH
Confidence 3555 5999999999999999999999995 88999999998888888888777655443 257999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccc
Q psy15069 143 ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQA 222 (461)
Q Consensus 143 ~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (461)
++|++.+++.++...+ .+..+|++++|++
T Consensus 199 ~~F~i~~~~~ll~~~~---~~~~~e~~~~~~~------------------------------------------------ 227 (432)
T PRK10406 199 IPFALGAVLAVVALWL---RRQLDETSQQETR------------------------------------------------ 227 (432)
T ss_pred HHHHHHHHHHHHHHHH---HhcCCCCchHHHh------------------------------------------------
Confidence 9999877766544321 1111211110000
Q ss_pred cccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHH-HhhccccchhhHhhHH-HHhCCCch
Q psy15069 223 QIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIF-TSIGFNVPYVYIVKLA-EQRGVTRS 300 (461)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~g~s~~ 300 (461)
++ + .+.+.+ +++|+|+.+...+..++ ....++.+.+|+|.|+ ++.|.+..
T Consensus 228 -------------~~---------~-~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~ 279 (432)
T PRK10406 228 -------------AL---------K-EAGSLK-----GLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHAN 279 (432)
T ss_pred -------------hh---------c-ccccHH-----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 00 0 001111 34677777776655544 3666778889999999 56899999
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH--H--hhhhhhHHHHHHHHHHHhhhhhhHHHHH
Q psy15069 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV--I--CAFCYNYVELAIYAGVFGAMIGAYVGLT 376 (461)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 376 (461)
+.+...++..+...++.++.|+++||+++|+.... ..++.++..+ . ....++.+.......+.+++.+...+..
T Consensus 280 ~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (432)
T PRK10406 280 VASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLC--FGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSIS 357 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHH--HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888889999999999999876654432 2222211111 1 1112222222222222333344445566
Q ss_pred HHHHHHhcCccchhHHHHHHHHHHHh-hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 377 SVILVDLLGLDRLTNAFGLLLLFQGI-ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 377 ~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+.+..|.+|+++|++++|+.+...++ ++...|.+.+. .+.+|+|...+++.+++.+++.+..+++
T Consensus 358 ~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 358 GILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 77889999999999999999887664 34557888774 4666778877777777777766655543
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.5e-32 Score=269.68 Aligned_cols=344 Identities=16% Similarity=0.117 Sum_probs=256.7
Q ss_pred ehHH-HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---c-----chhhHH
Q psy15069 10 LFIE-FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---K-----NVITLC 80 (461)
Q Consensus 10 ~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---~-----~~~~l~ 80 (461)
++|. +.+++|.|+.++|++.+++.+++.+++++.|++.||+|||+++..+.++.+++.+.+.++ + +++.++
T Consensus 37 ~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (399)
T PRK05122 37 VLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLL 116 (399)
T ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHH
Confidence 3454 678899999999999999999999999999999999999999999999888776654432 2 355666
Q ss_pred HHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069 81 ITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG 159 (461)
Q Consensus 81 i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~ 159 (461)
+ .|+++|++.+...+....++.+++ +|+|++++++...+..+|.++++++++.+.+.+|||+.+++..++.++..+
T Consensus 117 ~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~-- 193 (399)
T PRK05122 117 L-GRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLL-- 193 (399)
T ss_pred H-HHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH--
Confidence 6 599999999998888888888887 588999999999999999999999999999999999998876665443322
Q ss_pred hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
+.++.++.+++ + ++
T Consensus 194 -~~~~~~~~~~~---~-----------------------------------------------------------~~--- 207 (399)
T PRK05122 194 -LARPRPAVPPV---K-----------------------------------------------------------GE--- 207 (399)
T ss_pred -HHhcCCCCCCC---C-----------------------------------------------------------cc---
Confidence 22221111100 0 00
Q ss_pred cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVI 319 (461)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~ 319 (461)
+ .+.++ .+| +++.......+....+.....++|.|+++.|. .+.+...+...++.++++++
T Consensus 208 -------~---~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 268 (399)
T PRK05122 208 -------R---LPFRR-----VLG--RVWPYGMGLALASIGFGTIATFITLYYAARGW--DGAALALTLFGVAFVGARLL 268 (399)
T ss_pred -------c---hhHHH-----HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHH
Confidence 0 00000 011 11222222223344455566788888877776 34566777888899999999
Q ss_pred hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069 320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF 399 (461)
Q Consensus 320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 399 (461)
.|++.||+++++.. ..+..+.++..+...+.++.+..++..++.|++.+..++.....+.+.+|+++++++.|+.+..
T Consensus 269 ~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (399)
T PRK05122 269 FGNLINRLGGLRVA--IVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVF 346 (399)
T ss_pred HHHHHHHhccHHHH--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999997654433 3444455555555556667777777788999999888888777888999999999999999999
Q ss_pred HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
..+|..++|.+.|.+.|..| |+..|++.+++.+++.+..+.+++
T Consensus 347 ~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 347 LDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999875 999999988888877766655433
No 34
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.2e-32 Score=269.21 Aligned_cols=351 Identities=13% Similarity=0.047 Sum_probs=259.1
Q ss_pred eeeeehHHHHh-HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc-----cchhhH
Q psy15069 6 SFGILFIEFTK-VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA-----KNVITL 79 (461)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~-----~~~~~l 79 (461)
.++++.+.+.+ ++|+|++|.+++.+++.+.+.+++++.|++.||+|+|+++..+.++.++..++.+++ ++++.+
T Consensus 52 ~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~l 131 (462)
T PRK15034 52 LFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIF 131 (462)
T ss_pred HHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHH
Confidence 45667788766 899999999999999999999999999999999999999999999999999999987 899999
Q ss_pred HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH-----H-------------hhc
Q psy15069 80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV-----R-------------EYG 140 (461)
Q Consensus 80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~-----~-------------~~g 140 (461)
++. |++.|++ +..+++....+++||| |+||+++|+...+.++|..+.+++...++ + ..+
T Consensus 132 li~-r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~ 209 (462)
T PRK15034 132 IVI-ALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMS 209 (462)
T ss_pred HHH-HHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHH
Confidence 984 9999998 6688889999999996 67999999996555566555444443322 2 335
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCc
Q psy15069 141 WKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVIST 220 (461)
Q Consensus 141 w~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (461)
||.+.++..++.++..++.+++.++++..+
T Consensus 210 ~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~-------------------------------------------------- 239 (462)
T PRK15034 210 LANAAWIWVPLLAIATIAAWSGMNDIASSR-------------------------------------------------- 239 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccc--------------------------------------------------
Confidence 888888888888777766666544321100
Q ss_pred cccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCch
Q psy15069 221 QAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS 300 (461)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 300 (461)
.+. +.. .+.+|+|+.|++++.+++.+.++..+..++|.|.++ .++..
T Consensus 240 --------------------------~~~-~~~-----~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~ 286 (462)
T PRK15034 240 --------------------------ASI-ADQ-----LPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDV 286 (462)
T ss_pred --------------------------cCH-HHH-----HHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChH
Confidence 000 111 136899999999999999999998898899999854 33333
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH----HHhhhh--hhHHHHHHHHHHHhhhhhhHHH
Q psy15069 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT----VICAFC--YNYVELAIYAGVFGAMIGAYVG 374 (461)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~l~g~~~~~~~~ 374 (461)
.......+..+...+.++++|+++||+|.+|..... ++...++. ...+.. .+.+.....++...++.|..+.
T Consensus 287 ~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~--~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng 364 (462)
T PRK15034 287 NILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLIN--FIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG 364 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHH--HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccch
Confidence 333334456688889999999999998766654432 22222221 111111 1344444433333344444455
Q ss_pred HHHHHHHHhcCc---------------------cchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069 375 LTSVILVDLLGL---------------------DRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF 433 (461)
Q Consensus 375 ~~~~~~~~~~~~---------------------~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l 433 (461)
....++.+++|+ ++.|.+.|+....+.+|+++-|.+.|...+.+|+|...|+...+.++
T Consensus 365 svfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~ 444 (462)
T PRK15034 365 STFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYI 444 (462)
T ss_pred HHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 555566666663 26789999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHH
Q psy15069 434 VSGVMLFVIP 443 (461)
Q Consensus 434 ~~~~~~~~~~ 443 (461)
++..+.+...
T Consensus 445 ~~~~~~w~~y 454 (462)
T PRK15034 445 VCVLLTWLVY 454 (462)
T ss_pred HHHHHHHHHh
Confidence 8888776543
No 35
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=2.7e-32 Score=267.03 Aligned_cols=345 Identities=13% Similarity=0.095 Sum_probs=261.6
Q ss_pred HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeee-hhhHHHHHHHHHhhcccchhhHHHHhhccccccc
Q psy15069 13 EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTI-CGAILGSACLAVSVFAKNVITLCITIGFGTGLGF 91 (461)
Q Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~-~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~ 91 (461)
.+++++|.|..++|++.+++.+...+.+|+.|++.||+|||+.++ .+.++..++.++++++++++.+++. |++.|.+.
T Consensus 23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~ 101 (375)
T TIGR00899 23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVL-GVLLSSFA 101 (375)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHH-HHHHHhhh
Confidence 457889999999999999999999999999999999999988755 4566667777888999999988874 78888777
Q ss_pred cccchhHHHHHHhhhh-ccchhh--hhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15069 92 GLIYLPAIVSVTCYFE-RLRSLA--TGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQ 168 (461)
Q Consensus 92 ~~~~~~~~~~~~~~f~-~~rg~a--~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~ 168 (461)
+...+.......++.| ++|+++ .++...+.++|.+++|++++.+.+.+|||++|++.++..++..+..+++.|+++.
T Consensus 102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 7777777777777775 445543 6888888999999999999999999999999999998877776666555554321
Q ss_pred CCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCch
Q psy15069 169 PVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDD 248 (461)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (461)
++ +.+ +++
T Consensus 182 ~~--~~~----------------------------------------------------------~~~------------ 189 (375)
T TIGR00899 182 GA--PGA----------------------------------------------------------LTR------------ 189 (375)
T ss_pred Cc--ccc----------------------------------------------------------cCc------------
Confidence 11 000 000
Q ss_pred hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC
Q psy15069 249 TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP 327 (461)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 327 (461)
.+.+ +.+++|.++.+.+..++..........++|.++ ++.|.++.+.+.+.....+..++++++.|++.||+
T Consensus 190 --~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 262 (375)
T TIGR00899 190 --LEVR-----GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF 262 (375)
T ss_pred --chhh-----hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 0000 134566666655555555544455566788887 77899999999988888888888999999999997
Q ss_pred CcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhc
Q psy15069 328 CVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVG 407 (461)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g 407 (461)
++|+... .+.+...+......+.++.+..++..++.|++.+...+....+..|..|+ +++++.++.+...++|..++
T Consensus 263 g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g 339 (375)
T TIGR00899 263 GKRRLML--LAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIA 339 (375)
T ss_pred cchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHH
Confidence 6555433 33333334444444556677777777888888888888888888898875 56799999999999999999
Q ss_pred cceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 408 PPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 408 p~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
|.+.|.+.|..| |+..|++.+++.+++.++...
T Consensus 340 ~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 340 GSVGGILAERWS-YHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHhe
Confidence 999999999875 999999988888777766544
No 36
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=6.1e-33 Score=280.88 Aligned_cols=374 Identities=13% Similarity=0.096 Sum_probs=276.0
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
.++..|++.+|+|.+..+.+|+.+.+.+++.+++++.|++.||+|||+++..+.+++.++.+++++++|++.+++. |++
T Consensus 25 v~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~-r~l 103 (495)
T PRK14995 25 LHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIAT-RAL 103 (495)
T ss_pred HHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH-HHH
Confidence 4567899999999999999999999999999999999999999999999999999999999999999999999985 999
Q ss_pred ccccccccchhHHHHHHhhh-h-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 87 TGLGFGLIYLPAIVSVTCYF-E-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f-~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
+|+|.+...+.....+.+++ | |+|++++|+.....++|..++|++++.+.+.+|||+.|++...++++..++.++..|
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998888877777766 4 889999999999999999999999999999999999999998888777666666555
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc--
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC-- 242 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 242 (461)
+++.+++ ++.+ ..+........ ... .... ++. .++. .+...-..+
T Consensus 184 ~~~~~~~--~~~d-----------~~g~~~~~~~~-~~l-----------~~~~--~~~---~~~~---~~~~~~~~~~~ 230 (495)
T PRK14995 184 RQAGRRD--QPLN-----------LGHALMLIVAI-LLL-----------VYSA--KTA---LKGF---LSLWVTSLTLL 230 (495)
T ss_pred CCCCCCC--CCCC-----------hHhHHHHHHHH-HHH-----------HHHH--Hhc---cccC---CchHHHHHHHH
Confidence 4321110 0000 00000000000 000 0000 000 0000 000000000
Q ss_pred ------ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhh
Q psy15069 243 ------LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMV 315 (461)
Q Consensus 243 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~ 315 (461)
.......+...+++.+.+++|+|.+....+..++.....+....+.|.|++ .+|.++.+++.......++..+
T Consensus 231 ~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~ 310 (495)
T PRK14995 231 TGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGF 310 (495)
T ss_pred HHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 000000001122334457889999888888888877777788889999984 5799999999999999999999
Q ss_pred hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069 316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF---CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA 392 (461)
Q Consensus 316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (461)
++++.|++.||+++|+. +..++++.+++.+.+.. .++.+..+...++.|++.+...+.....+.+..|+++++.+
T Consensus 311 ~~~~~g~l~~r~g~~~~--~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~ 388 (495)
T PRK14995 311 SGPIAGILVSRLGLRLV--ATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAA 388 (495)
T ss_pred HHHHHHHHHHHcCchHH--HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchH
Confidence 99999999999765443 33444444444433322 23555566678889999998888888888899999999999
Q ss_pred HHHHHHHHHhhhhhccceeeeeec
Q psy15069 393 FGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 393 ~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
.++.++..++|+.+|+.+.|.+.+
T Consensus 389 ~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 389 GAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998865
No 37
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=6.6e-32 Score=267.37 Aligned_cols=353 Identities=15% Similarity=0.184 Sum_probs=269.6
Q ss_pred eeeehHHHHhHhcCCCcc-----HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHH
Q psy15069 7 FGILFIEFTKVFQEGDGV-----TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCI 81 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i 81 (461)
+..++|.+.+++|.+..+ .|++.+++.+...+++|+.|++.||+|||+++..+.++..++.+++.++++++.+++
T Consensus 33 ~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (408)
T PRK09874 33 VMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLI 112 (408)
T ss_pred hhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 446789999999998765 489999999999999999999999999999999999999999999889999999987
Q ss_pred HhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 82 TIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 82 ~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
. |++.|++.+. .+.....+.+++ +++|++++++...+.++|.+++|++.+.+.+.+|||++|++.+++.++..+..+
T Consensus 113 ~-~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (408)
T PRK09874 113 L-RALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTL 190 (408)
T ss_pred H-HHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 5 8999987654 555666677777 578999999999999999999999999999989999999999988777666555
Q ss_pred hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069 161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240 (461)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (461)
+..++++.+.+ ++ ++
T Consensus 191 ~~~~~~~~~~~-~~------------------------------------------------------------~~---- 205 (408)
T PRK09874 191 FCIRENFQPVS-KK------------------------------------------------------------EM---- 205 (408)
T ss_pred HHhccCccccc-ch------------------------------------------------------------hh----
Confidence 54443321110 00 00
Q ss_pred ccccCCchhhhhHhhhhccccccchhHHHH-HHHHHHHhhccccchhhHhhHHHHhCCCchh----hHHHHHHHhhhhhh
Q psy15069 241 TCLNLSDDTKQTLREMLDMELLRDPIFILF-TISNIFTSIGFNVPYVYIVKLAEQRGVTRSN----ASSLISIVGAANMV 315 (461)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~~ 315 (461)
.+.+.. .+.+++|+++.. .+..+...........+++.|.++.+.+..+ .+.+.++.+++.++
T Consensus 206 ------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~ 273 (408)
T PRK09874 206 ------LHMREV------VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALL 273 (408)
T ss_pred ------hHHHHH------HHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 000011 123566666543 3333333444445567778887654433332 45556667788889
Q ss_pred hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069 316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395 (461)
Q Consensus 316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 395 (461)
+++..|+++||+++++... .+..+..+..+...+.++.+.+++..++.|++.+...+.....+.+..|++++++.+++
T Consensus 274 ~~~~~g~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 351 (408)
T PRK09874 274 SAPRLGKLGDRIGPEKILI--TALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSY 351 (408)
T ss_pred HHHHHHHHHhccccchhHH--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehH
Confidence 9999999999976555443 34444445555555566777777788889999998888888888899999999999999
Q ss_pred HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
.+....+|..+||.++|.+.|..| |+..|++.+++.+++.+..+.
T Consensus 352 ~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 352 NQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999875 999999999888887776654
No 38
>KOG2532|consensus
Probab=100.00 E-value=1.8e-33 Score=276.89 Aligned_cols=375 Identities=17% Similarity=0.200 Sum_probs=289.5
Q ss_pred HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc--chhhHHHHhhcccccccc
Q psy15069 15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK--NVITLCITIGFGTGLGFG 92 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~--~~~~l~i~~~~l~G~g~~ 92 (461)
..++++|..+.|++++.+..++.+++.++|.++||||.|+++..+.++.++++++..++. +++.+++ .|+++|++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~-~R~lqGl~~g 143 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLV-LRFLQGLGQG 143 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHH-HHHHhHHHHh
Confidence 457899999999999999999999999999999999999999999999999999977764 4555555 5999999999
Q ss_pred ccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh-hchhHHHHHHHHHHHHHHHHHhhcccCCCCCC
Q psy15069 93 LIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-YGWKITLLVLSVTVLSAVLFGILLRPLEEQPV 170 (461)
Q Consensus 93 ~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~ 170 (461)
..+++...+..+|.| +||++..++..++..+|.++.-|+++.+++. +||++.|++.|+++++..++++++-.+.|.+.
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 999999999999995 9999999999999999999999999999998 99999999999999998877666544332221
Q ss_pred CCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhh
Q psy15069 171 EEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTK 250 (461)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (461)
+ +-+++|.+.+.+. +.+++. .
T Consensus 224 --~-------------~is~~El~~I~~~--------------------------------k~~~~~-----------~- 244 (466)
T KOG2532|consen 224 --P-------------NISEKELKYIEKG--------------------------------KSEAHV-----------K- 244 (466)
T ss_pred --C-------------CCCHHHHHHHHhc--------------------------------cccccc-----------C-
Confidence 0 0111111111111 000000 0
Q ss_pred hhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCc
Q psy15069 251 QTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCV 329 (461)
Q Consensus 251 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~ 329 (461)
.. .+...+++++++.+|.+.++.++.+.+.+.+..|+|.|+ +.++++..+.|++.++..+...+.++++|.++||...
T Consensus 245 ~~-~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 245 KK-PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred CC-CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 00 233344689999999999999999999999999999999 6789999999999999999999999999999998644
Q ss_pred -------chhHHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH
Q psy15069 330 -------NRLYIYNGCLAICGAATVICAFCYN--YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ 400 (461)
Q Consensus 330 -------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 400 (461)
+|+..-.++....+++++.+.+.++ .+..++++.+.-...|...+....-..+.. +++.+..+|+.+...
T Consensus 324 ~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~ 402 (466)
T KOG2532|consen 324 RILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVG 402 (466)
T ss_pred ccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHH
Confidence 4556666777777888887777663 222222222222223333334443334434 488999999999999
Q ss_pred Hhhhhhccceeeeeec-c-cCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHhh
Q psy15069 401 GIASLVGPPIAGFLYD-S-TLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLK 451 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~-~-~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~ 451 (461)
.+.++++|.+.|.+.. . ...|+.+|++.+++.+++.+...+.-..++.+..
T Consensus 403 ~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~ 455 (466)
T KOG2532|consen 403 ALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWT 455 (466)
T ss_pred HHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCcc
Confidence 9999999999999994 2 2369999999999999988776655433333333
No 39
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=2.5e-32 Score=275.55 Aligned_cols=383 Identities=12% Similarity=0.082 Sum_probs=269.8
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
.+....|.+.+++|.+..+.+++.+.+.++..+++++.|++.||+|||++++.+.++.+++.+++.++++++.+++. |+
T Consensus 28 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~ 106 (471)
T PRK10504 28 IVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLA-RV 106 (471)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH-HH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999998875 99
Q ss_pred cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
++|++.+...+.....+.+++| ++|++++|+...+.++|..++|++++.+.+..|||+.|.+...++++..+......|
T Consensus 107 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 107 LQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999988888888899985 788999999999999999999999999999999999999988777766655554443
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc-c-cccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE-D-KTTC 242 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 242 (461)
+.+.+. ++.+. .. ...............+ +++... ........-.. . ...+
T Consensus 187 ~~~~~~---~r~~~--~~-~~~~~~~~~~~~~~~~--------------------~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (471)
T PRK10504 187 NYTMQT---RRFDL--SG-FLLLAVGMATLTLALD--------------------GSKGLG-LSPLAIAGLVAVGVVALL 239 (471)
T ss_pred CccccC---CCCCh--HH-HHHHHHHHHHHHHHHh--------------------cCCcCC-cchHHHHHHHHHHHHHHH
Confidence 321110 00000 00 0000000000000000 000000 00000000000 0 0000
Q ss_pred ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069 243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILG 321 (461)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g 321 (461)
. ...+.+...++..+.+++|||.++...+..++..........+.|.|++ ..|.++.+.++......++.+++.++.|
T Consensus 240 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 318 (471)
T PRK10504 240 L-YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVV 318 (471)
T ss_pred H-HHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000011222335789999988888888877777667778888885 5899999999999999999999999999
Q ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069 322 YISDRPCVNRLYIYNGCLAICGAATVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL 398 (461)
Q Consensus 322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 398 (461)
++.||+++++... .+..+.++...++.+. ++.+...+..++.|++.+...+....+..+.+|++.++.+.|+.++
T Consensus 319 ~l~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 396 (471)
T PRK10504 319 QVVNRFGYRRVLV--ATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSM 396 (471)
T ss_pred HHHHHcCchHHHH--HHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHH
Confidence 9999976555443 3333333333332222 2333344556677888888888888889999999999999999999
Q ss_pred HHHhhhhhccceeeeeecccC
Q psy15069 399 FQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 399 ~~~~g~~~gp~i~g~l~~~~g 419 (461)
...+|..+|+.+.|.+.+..|
T Consensus 397 ~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 397 IMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999988754
No 40
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1.2e-31 Score=262.93 Aligned_cols=345 Identities=13% Similarity=0.083 Sum_probs=269.1
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceee----ehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVT----ICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~----~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
.++|.+.+++|.|..++|++.+++.+...+++++.|++.||+|||+.. ..+..+..+ .++.+++++|.+++. |
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~-~ 101 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIA-I 101 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHH-H
Confidence 456689999999999999999999999999999999999999985432 222222222 244567889999885 8
Q ss_pred ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
+++|.+.+...+...++..+ ++|+|++++|....+.++|.+++|++++.+.+.+|||..|.+..+..+.. +....++|
T Consensus 102 ~l~~~~~~~~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~-~~~~~~~~ 179 (382)
T TIGR00902 102 GLFALFFSAGMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFM-LIGFLIKP 179 (382)
T ss_pred HHHHHHHccchhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH-HHHHHcCC
Confidence 88898888877777666554 47889999999999999999999999999999999999998876553322 22223322
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
++ .+++++++ +++
T Consensus 180 ~~-~~~~~~~~----------------------------------------------------------~~~-------- 192 (382)
T TIGR00902 180 TI-PPKDAIPE----------------------------------------------------------DES-------- 192 (382)
T ss_pred CC-CCCccccc----------------------------------------------------------ccc--------
Confidence 21 11100000 000
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYIS 324 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 324 (461)
+ .++.. .+++|+|++|...+..++...+...+..+.|.|+++.|.++.+.+.+++...++.+++.++.+++.
T Consensus 193 --~-~~~~~-----~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~ 264 (382)
T TIGR00902 193 --Q-GDSAF-----IALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLF 264 (382)
T ss_pred --c-cchhH-----HHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 0 00111 146899999999888888888888899999999988999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH-HHHHhh
Q psy15069 325 DRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL-LFQGIA 403 (461)
Q Consensus 325 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g 403 (461)
||++.++ ++..+.+..++......+.++.+.++...+++|++.+...+....++.+. |+++++++.++++ ...++|
T Consensus 265 ~r~g~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g 341 (382)
T TIGR00902 265 QNCSARD--LLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGL 341 (382)
T ss_pred hhCCHHH--HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHH
Confidence 9965444 34467777777777778888988889899999999999999999999988 8889999999987 457799
Q ss_pred hhhccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069 404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~ 438 (461)
..+||.++|+++|+.| + ..|...+++.+++.++
T Consensus 342 ~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 342 IAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 9999999999999986 4 6677777777665443
No 41
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1e-31 Score=267.83 Aligned_cols=361 Identities=15% Similarity=0.169 Sum_probs=252.2
Q ss_pred eeeehHHH-HhHh--cCCCccHHHHH-----HHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhh
Q psy15069 7 FGILFIEF-TKVF--QEGDGVTSWIA-----SILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVIT 78 (461)
Q Consensus 7 ~~~~~~~~-~~~~--~~~~~~~~~~~-----s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~ 78 (461)
++.+.|.. .+++ +.++. .+++. ++..++..+++++.|++.||+|||+++..+.++++++.++++++++++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 119 (438)
T PRK09952 41 YGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFST 119 (438)
T ss_pred HHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 34455543 4444 56665 56654 3445667788899999999999999999999999999999999999873
Q ss_pred --------HHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH--------hhch
Q psy15069 79 --------LCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR--------EYGW 141 (461)
Q Consensus 79 --------l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~--------~~gw 141 (461)
+++ .|+++|++.+..++....++.|++| |+|++.++..+.+..+|.++++.+...+.. .+||
T Consensus 120 ~~~~~~~~l~~-~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gW 198 (438)
T PRK09952 120 IGWWAPVLLVT-LRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGW 198 (438)
T ss_pred HHHHHHHHHHH-HHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccCh
Confidence 554 5999999999999999999999995 789999999999999999999888776653 4799
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcc
Q psy15069 142 KITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQ 221 (461)
Q Consensus 142 ~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (461)
|++|++.++..++.. +..+..+|+|++++.++
T Consensus 199 r~~f~~~~~~~l~~~---~l~~~~~es~~~~~~~~--------------------------------------------- 230 (438)
T PRK09952 199 RIPFLFSIVLVLIAL---WVRNGMEESAEFEQQQH--------------------------------------------- 230 (438)
T ss_pred HHHHHHHHHHHHHHH---HHHHhCCCChhHHHHHh---------------------------------------------
Confidence 999998776644322 11112222222100000
Q ss_pred ccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHH-HHHHHhhccccchhhHhhHH-HHhCCCc
Q psy15069 222 AQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTI-SNIFTSIGFNVPYVYIVKLA-EQRGVTR 299 (461)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~s~ 299 (461)
+ .++.++ +.+.. ..++++|+.+...+ ..++.....+....|.|.|+ ++.|++.
T Consensus 231 ------~----~~~~~~-----------~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~ 285 (438)
T PRK09952 231 ------E----QAAAKK-----------RIPVI----EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPR 285 (438)
T ss_pred ------h----cccccc-----------cCCHH----HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 0 000000 00000 02356666666543 44555667777888999998 6788888
Q ss_pred hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh--hh-hh-hHHHHHHHHHHHhhhhhhHHHH
Q psy15069 300 SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC--AF-CY-NYVELAIYAGVFGAMIGAYVGL 375 (461)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~--~~-~~-~~~~~~~~~~l~g~~~~~~~~~ 375 (461)
.....+..+.++..+++.++.|+++||+++|+... .+.++..++.+.+ .. .. +.+.++...++.+++.+...+.
T Consensus 286 ~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 363 (438)
T PRK09952 286 ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYI--TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH--HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666677888889999999999987665443 2332322222211 11 22 2334444556667888877888
Q ss_pred HHHHHHHhcCccchhHHHHHHHHHH-Hhhhhhccceeeeeeccc-CCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 376 TSVILVDLLGLDRLTNAFGLLLLFQ-GIASLVGPPIAGFLYDST-LSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~~gp~i~g~l~~~~-g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
.++++.|.+|++.|+++.|+.+... .+++.++|.+.|++.|.. ++|...+...+++.+++.+..+.+++
T Consensus 364 ~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 364 QQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 8899999999999999999966554 489999999999999865 46888888888888877777665543
No 42
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.3e-31 Score=263.94 Aligned_cols=341 Identities=16% Similarity=0.122 Sum_probs=252.2
Q ss_pred ehH-HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hc-----ccchhhHH
Q psy15069 10 LFI-EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VF-----AKNVITLC 80 (461)
Q Consensus 10 ~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~-----~~~~~~l~ 80 (461)
++| ++.+|+|.|..++|++.+++.+.+.+++|+.|++.||+|||++++.+.+++.++.+.. ++ .++++.++
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLV 116 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH
Confidence 344 4678999999999999999999999999999999999999999999988877665432 22 24677777
Q ss_pred HHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069 81 ITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG 159 (461)
Q Consensus 81 i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~ 159 (461)
+ .|+++|++.+...++..+++.+++ +|+|++++++...+.++|..++|++++.+.+.+|||+.+.+..+..++..
T Consensus 117 ~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~--- 192 (392)
T PRK12382 117 V-GRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW--- 192 (392)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---
Confidence 7 499999999988888888888888 58899999999999999999999999999998999987765544433222
Q ss_pred hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
.+.++.++.+.++ + +
T Consensus 193 ~~~~~~~~~~~~~--~------------------------------------------------------------~--- 207 (392)
T PRK12382 193 AFNGTVRKVPAHA--G------------------------------------------------------------E--- 207 (392)
T ss_pred HHHHhccCCCCCc--c------------------------------------------------------------c---
Confidence 1222211111000 0 0
Q ss_pred cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVI 319 (461)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~ 319 (461)
+.+.++..+ .++.+.+ ..++..........+.|.|+++.+.+. .+.......++.++++++
T Consensus 208 ------~~~~~~~~~------~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 268 (392)
T PRK12382 208 ------RPSLWSVVG------LIWKPGL-----GLALQGVGFAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVL 268 (392)
T ss_pred ------CchHHHHHH------HHHHhHH-----HHHHHHHHHhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHH
Confidence 000001111 1111111 222233344455678888887777653 556667778888999999
Q ss_pred hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069 320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF 399 (461)
Q Consensus 320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 399 (461)
.|++.||+++++... .+..+.++..++..+.++.+..++..++.|++.+...+.....+.+.+|+++|+++.|+.+..
T Consensus 269 ~g~l~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (392)
T PRK12382 269 FGWMPDRFGGVKVAI--VSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAF 346 (392)
T ss_pred HHHHHHhcCCCeehH--HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 999999987665544 334444455555555667777777788899998888888888889999999999999999999
Q ss_pred HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
..+|..+||.+.|++.|+.| |+..|.+.+++.+++.+..+.
T Consensus 347 ~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 347 QDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999875 999999999888777766543
No 43
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=5e-32 Score=265.67 Aligned_cols=343 Identities=14% Similarity=0.116 Sum_probs=255.4
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
...++|.+++++|.|..++|++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.+.+++++|++.+++. |++
T Consensus 25 ~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l 103 (381)
T PRK03633 25 LNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAW-RFV 103 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHH
Confidence 4577999999999999999999999999999999999999999999999999999999999999999999999985 899
Q ss_pred ccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
+|++.+...+.....+.++. +++|++++++.+.+.++|..++|++++.+.+...|...+. .+..... .+..++.+.+
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 181 (381)
T PRK03633 104 AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAA-ILPLLFTRIL 181 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHH-HHHHHHhccc
Confidence 99999988877766666665 6889999999999999999999999999877544433332 2222211 1111222211
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
+ .+++ + ++
T Consensus 182 ~-~~~~---~-----------------------------------------------------------~~--------- 189 (381)
T PRK03633 182 N-QQAE---N-----------------------------------------------------------HD--------- 189 (381)
T ss_pred C-CCCC---C-----------------------------------------------------------CC---------
Confidence 1 1000 0 00
Q ss_pred CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069 246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD 325 (461)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d 325 (461)
. .+. .+.+|+|.++......++....+.....++|.|+++.|.+..+.+.+.+...++.+++++..|++.|
T Consensus 190 ~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d 260 (381)
T PRK03633 190 S----TSI-----WPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLAD 260 (381)
T ss_pred C----CCH-----HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 0 000 1235677766554444444445555667899999888999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhh
Q psy15069 326 RPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASL 405 (461)
Q Consensus 326 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 405 (461)
|+++++.. ..+..+.+++..... . ........++.|++.+...|.....+.|..|+++++...+..+...++|.+
T Consensus 261 r~~~~~~l--~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ 335 (381)
T PRK03633 261 RFGRLLVL--RVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSL 335 (381)
T ss_pred HcCcHHHH--HHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 97654433 333444343333222 1 222334556667766677888888888999988888888898889999999
Q ss_pred hccceeeeeecccCCchHHHHHHhHHHHHHHHHH
Q psy15069 406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~ 439 (461)
+||.++|++.|+.| ++..|.+.+.+.+++.+..
T Consensus 336 igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 336 LGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHH
Confidence 99999999999875 8889888877776655443
No 44
>KOG3764|consensus
Probab=100.00 E-value=8.2e-33 Score=254.16 Aligned_cols=350 Identities=15% Similarity=0.137 Sum_probs=295.6
Q ss_pred HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069 15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI 94 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~ 94 (461)
.++.+-+.+++|++++.+.+...+.+|+.|.++||+|+|..+++|.++...++++.+|.++++.++++ |.+||+|.++.
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vA-R~LQgvgsA~~ 176 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVA-RSLQGVGSAFA 176 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHH-HHHhhhhHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred chhHHHHHHhhhh--ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15069 95 YLPAIVSVTCYFE--RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEE 172 (461)
Q Consensus 95 ~~~~~~~~~~~f~--~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~ 172 (461)
++++.+++.+.|| ++|++++|+.-.+.++|-.++||+++.+.+..|.+.+|++++++++....+.++..++.+.++++
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 9999999999995 56899999999999999999999999999999999999999999999998888876654332210
Q ss_pred cccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhh
Q psy15069 173 PVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQT 252 (461)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (461)
++ + ..+
T Consensus 257 ~~-------------------------------------------------------------~-------------~~~ 262 (464)
T KOG3764|consen 257 TE-------------------------------------------------------------Q-------------GTP 262 (464)
T ss_pred cc-------------------------------------------------------------c-------------Ccc
Confidence 00 0 011
Q ss_pred HhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcch
Q psy15069 253 LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNR 331 (461)
Q Consensus 253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 331 (461)
+ ++++++|..+.........+.+....-+-++.++ ++...+..+.|+.+....+...++..++|.++||++..|
T Consensus 263 ~-----~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~ 337 (464)
T KOG3764|consen 263 M-----WSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR 337 (464)
T ss_pred H-----HHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh
Confidence 1 2478899888877777777777777778888877 777766669999999999999999999999999977657
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc------chhHHHHHHHHHHHhhhh
Q psy15069 332 LYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD------RLTNAFGLLLLFQGIASL 405 (461)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~g~~ 405 (461)
-+....+++..+.+....++++++..+++-.+..+++.+...+........+.+.+ ..|..+++......+|.+
T Consensus 338 wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a 417 (464)
T KOG3764|consen 338 WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYA 417 (464)
T ss_pred HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhh
Confidence 66667777888888888889999888888877777777766665555555544433 567899999999999999
Q ss_pred hccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069 406 VGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 406 ~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~ 445 (461)
+||.++|.+.+..| +.|.-.+.++..++.+.++.+++..
T Consensus 418 ~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ll~~v 456 (464)
T KOG3764|consen 418 IGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLLLRIV 456 (464)
T ss_pred ccccccchheeehh-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999986 9999999999998888877766553
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=6.3e-31 Score=260.06 Aligned_cols=348 Identities=15% Similarity=0.083 Sum_probs=256.8
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
+...+|++.+++|.+.++.++..+++.+++.+++++.|++.||+|||++++.+.++++++.+++.+++|++.++++ |++
T Consensus 35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-r~l 113 (413)
T PRK15403 35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIA-RFI 113 (413)
T ss_pred hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHH-HHH
Confidence 4456788999999999999999999999999999999999999999999999999999999999999999999885 999
Q ss_pred ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
+|++.+...+.....+.++++ ++|++++++..++.++|..++|++++.+.+..|||+.|++.+++.++..++.++..|+
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999988666666677888885 6789999999999999999999999999988899999999998877766554444443
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
++.+++ ++ .+
T Consensus 194 ~~~~~~--~~-----------------------------------------------------------~~--------- 203 (413)
T PRK15403 194 TVKRGA--VP-----------------------------------------------------------FS--------- 203 (413)
T ss_pred CccccC--CC-----------------------------------------------------------CC---------
Confidence 211110 00 00
Q ss_pred CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069 246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILGYIS 324 (461)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 324 (461)
.+...+.. +.++|||.+|...+..++.....+.+..+.|.+++ ..|.++.+.++.......+.++++.+.+++.
T Consensus 204 ~~~~~~~~-----~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~ 278 (413)
T PRK15403 204 AKSVLRDF-----RNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFV 278 (413)
T ss_pred hHHHHHHH-----HHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00001111 24689999999888888877777788888899984 5699999999998888888888888888876
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069 325 DRPCVNRLYIYNGCLAICGAATVICA---FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG 401 (461)
Q Consensus 325 dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 401 (461)
+|...+|...........+...+... ..++.+..++..++++++.+...|......... ....+|++.++.+....
T Consensus 279 ~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~ 357 (413)
T PRK15403 279 KDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVIL 357 (413)
T ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHH
Confidence 54323332211111111121111111 122333345677788888887777776433222 22347999999999999
Q ss_pred hhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF 433 (461)
Q Consensus 402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l 433 (461)
.+..+++.+.|++.++. -...|...++++.
T Consensus 358 ~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~ 387 (413)
T PRK15403 358 MVMAVSVEIGRWLWFNG--GRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHcC--CchHHHHHHHHHH
Confidence 99999999999988873 3555555544443
No 46
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=6.8e-32 Score=274.23 Aligned_cols=380 Identities=14% Similarity=0.138 Sum_probs=251.6
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
.+.+.|++.+++|.++.+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++.++++|++.+++. |++
T Consensus 39 ~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l 117 (496)
T PRK03893 39 ITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIA-RLV 117 (496)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHH
Confidence 4467899999999999999999999999999999999999999999999999999999999999999999999885 899
Q ss_pred ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
.|++.+..++....++.+++| |+|++++++...+.++|.+++|++.+.+.+.+|||+.|++..+..+. .++.....|+
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~ 196 (496)
T PRK03893 118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPE 196 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCC
Confidence 999999888888888899885 78999999999999999999999999999999999999864333222 2221112222
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc--cc
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT--CL 243 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 243 (461)
+ ++.++++.+. + +.++..+. . . +++++.... ..
T Consensus 197 ~--~~~~~~~~~~--~----------~~~~~~~~----------------------~----~-----~~~~~~~~~~~~~ 231 (496)
T PRK03893 197 A--EDWKEKHAGK--A----------PVRTMVDI----------------------L----Y-----RGEHRIINILLTL 231 (496)
T ss_pred c--hhhhhhcccc--c----------cchhHHHH----------------------H----h-----cchhHHHHHHHHH
Confidence 1 1100000000 0 00000000 0 0 000000000 00
Q ss_pred cCCchhhhhHhhh----------------------hccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCch
Q psy15069 244 NLSDDTKQTLREM----------------------LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRS 300 (461)
Q Consensus 244 ~~~~~~~~~~~~~----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~ 300 (461)
............. ......+.+......+..+......+....++|.|+ ++.|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~ 311 (496)
T PRK03893 232 AAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPH 311 (496)
T ss_pred HHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHH
Confidence 0000000000000 000001112222222222222222234567899999 58999999
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSV 378 (461)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~ 378 (461)
+.+.+.+...++.++++++.|+++||+++++... .+..+.++..+..... .+.+......++.++......+..+.
T Consensus 312 ~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (496)
T PRK03893 312 TVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYV--CSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPK 389 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH--HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHH
Confidence 9999999999999999999999999976555433 3333333333222222 23333333333333333334456677
Q ss_pred HHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069 379 ILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG 436 (461)
Q Consensus 379 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~ 436 (461)
++.|.+|++++++++|+.+....+|+.+||.+.|.+.|..| |...+...+....+.+
T Consensus 390 ~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~~~~~ 446 (496)
T PRK03893 390 LIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFSLTFVV 446 (496)
T ss_pred HHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999875 8877766555444433
No 47
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=7.4e-31 Score=257.68 Aligned_cols=331 Identities=12% Similarity=0.051 Sum_probs=257.2
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
.+....|.+.+++|.++.+.+++.+++.++..+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |+
T Consensus 23 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 101 (385)
T TIGR00710 23 MYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVL-RF 101 (385)
T ss_pred HhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HH
Confidence 34566899999999999999999999999999999999999999999999999999999999999999999999885 89
Q ss_pred cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
+.|++.+...+....++.+++| ++|++++++.+....+|..++|.+++.+.+..|||++|++.++..++..+..++..|
T Consensus 102 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 102 VQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999995 789999999999999999999999999999899999999998887776665555444
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
+++.+++ ++ +
T Consensus 182 ~~~~~~~--~~------------------------------------------------------------~-------- 191 (385)
T TIGR00710 182 ETLPYEA--RI------------------------------------------------------------Q-------- 191 (385)
T ss_pred CCCCCcc--cC------------------------------------------------------------C--------
Confidence 3211110 00 0
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
.++.++..+ +.+|+|.++...+...+.....+....+.|.++ ++.|.++.+.+.+.+...++.++++++.|++
T Consensus 192 -~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 265 (385)
T TIGR00710 192 -ISTYFETFL-----LLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRF 265 (385)
T ss_pred -HHHHHHHHH-----HHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011111 356788888877776666666677777888888 5789999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAATVICAFC-----YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL 398 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 398 (461)
.||+++++.... +..+..+...++... +..+..+...++.|++.+...+.......|..| ++++++.++.+.
T Consensus 266 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 342 (385)
T TIGR00710 266 IKKWGAKSLLRM--GLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGT 342 (385)
T ss_pred HHhcCHHHHHHH--HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHH
Confidence 999765554433 233333322222221 223344555677888888888888888888877 678999999998
Q ss_pred HHHhhhhhccceeeeeec
Q psy15069 399 FQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 399 ~~~~g~~~gp~i~g~l~~ 416 (461)
....++.+.+.+.+.+.+
T Consensus 343 ~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 343 LRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 887655555555564444
No 48
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.3e-32 Score=266.67 Aligned_cols=333 Identities=21% Similarity=0.288 Sum_probs=257.3
Q ss_pred eeeehH-HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 7 FGILFI-EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 7 ~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
+....| .+.+++|.+..+++++.+++.++..+++++.|++.||+|||+++..+.++.+++.++..+++|++.+++ .|+
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 93 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLI-ARF 93 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHH-HHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhh-hcc
Confidence 445677 889999999999999999999999999999999999999999999999999999666667788886665 599
Q ss_pred cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
+.|++.+...+....++.+++| |+|++++++...+.++|.+++|++++.+.+.+|||+.|++.++++++..++..++.+
T Consensus 94 l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 94 LLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred ccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhh
Confidence 9999999999999999999996 699999999999999999999999999998899999999999999988776545554
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
+++.+++++.+ ++++
T Consensus 174 ~~~~~~~~~~~----------------------------------------------------------~~~~------- 188 (352)
T PF07690_consen 174 EPPPPRERESP----------------------------------------------------------KESE------- 188 (352)
T ss_dssp --STTTT--SS----------------------------------------------------------TTTT-------
T ss_pred hcccccccccc----------------------------------------------------------cccc-------
Confidence 43322210000 0000
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCC-chhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVT-RSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s-~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
++.+.+..+ ..+.+.++|.+|...+..++..+.......++|.|+ ++.|.+ ..+.+...++..+..++++++.|+
T Consensus 189 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (352)
T PF07690_consen 189 --SKKPKPLKP-GFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGR 265 (352)
T ss_dssp ----HHHCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --ccccccccc-ccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 011345556566555555666667777889999985 889999 789999999999999999999999
Q ss_pred ccCCCCcchhHHHHH-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069 323 ISDRPCVNRLYIYNG-CLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG 401 (461)
Q Consensus 323 l~dr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 401 (461)
+.||+++++...... ...+..+.+......++.++.+...++.|++.+...+....++.+.+|+++++++.|+.+...+
T Consensus 266 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 345 (352)
T PF07690_consen 266 LSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGS 345 (352)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 999976554443322 2222222222233333556777788889999999999999999999999999999999999999
Q ss_pred hhhhhcc
Q psy15069 402 IASLVGP 408 (461)
Q Consensus 402 ~g~~~gp 408 (461)
+++.+||
T Consensus 346 ~~~~igP 352 (352)
T PF07690_consen 346 LGGIIGP 352 (352)
T ss_dssp HHHHHHH
T ss_pred HHHHHCC
Confidence 9999987
No 49
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=5.7e-31 Score=260.09 Aligned_cols=329 Identities=14% Similarity=0.068 Sum_probs=253.3
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT 87 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~ 87 (461)
....|++++++|.++.+.+++.+++.+++.+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |+++
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 104 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVL-RFVQ 104 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-HHHH
Confidence 345677899999999999999999999999999999999999999999999999999999999999999999885 8999
Q ss_pred cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069 88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLE 166 (461)
Q Consensus 88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~ 166 (461)
|++.+...+.....+.++++ ++++++.+......++|..++|++++.+.+.+|||+.|++.+++.++..++.++.++++
T Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (401)
T PRK11043 105 AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK 184 (401)
T ss_pred HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99988777777778888885 66788889988889999999999999999999999999999888877666554443221
Q ss_pred CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069 167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS 246 (461)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (461)
+.++ +
T Consensus 185 ~~~~---~------------------------------------------------------------------------ 189 (401)
T PRK11043 185 KARK---Q------------------------------------------------------------------------ 189 (401)
T ss_pred Cccc---c------------------------------------------------------------------------
Confidence 1000 0
Q ss_pred chhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069 247 DDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR 326 (461)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 326 (461)
++.+...+ +.+|+|+++...+...+....++.+..+.|.++++.|++..+.++......++.++++++.+++.||
T Consensus 190 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r 264 (401)
T PRK11043 190 SQDALTFK-----QLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK 264 (401)
T ss_pred chHHHHHH-----HHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111 3567777776555555555555666778899888899999999998888888999999999999999
Q ss_pred CCcchhHHH-HHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069 327 PCVNRLYIY-NGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA 403 (461)
Q Consensus 327 ~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 403 (461)
+++++.... .....+..+.+..... .++.+...+...+.|++.+..++.......+..| ++++++.|+.+.....+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~ 343 (401)
T PRK11043 265 WGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGL 343 (401)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHH
Confidence 765543321 1222222222222222 2344455555677888888888888877777776 67999999999999999
Q ss_pred hhhccceeeeeeccc
Q psy15069 404 SLVGPPIAGFLYDST 418 (461)
Q Consensus 404 ~~~gp~i~g~l~~~~ 418 (461)
+..++.+.|.+.|..
T Consensus 344 ~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 344 CFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHccCCC
Confidence 999999999998853
No 50
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-32 Score=251.99 Aligned_cols=356 Identities=18% Similarity=0.169 Sum_probs=284.0
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh---hHHHHh
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI---TLCITI 83 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~---~l~i~~ 83 (461)
++++.+.+.+|+|+|++|.+++.+++.+...+..++.|.+.||+|.|++...+.++..+-++..+++...+ ++++ +
T Consensus 33 ~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~-~ 111 (417)
T COG2223 33 FSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLV-I 111 (417)
T ss_pred HHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHH-H
Confidence 56778889999999999999999999999999999999999999999999999999999999988886554 8887 4
Q ss_pred hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc---hhHHHHHHHHHHHHHHHHH
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG---WKITLLVLSVTVLSAVLFG 159 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g---w~~~f~i~~~~~l~~~i~~ 159 (461)
+++.|++.+. ....+..+++||| |++|.|+|++. ..++|..+...++..+....| ||.+..+..+..++..++.
T Consensus 112 gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~ 189 (417)
T COG2223 112 GLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLA 189 (417)
T ss_pred HHHHhcccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8999997665 5556677899996 77899999999 888998888888888888888 9999999988888877777
Q ss_pred hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
++...+.++.+. +.
T Consensus 190 ~~~~~d~p~~r~-~~----------------------------------------------------------------- 203 (417)
T COG2223 190 WLGMNDVPEHRA-SV----------------------------------------------------------------- 203 (417)
T ss_pred HHHhCCChhhhc-cc-----------------------------------------------------------------
Confidence 766544322110 00
Q ss_pred cccccCCchhh-hhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069 240 TTCLNLSDDTK-QTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSR 317 (461)
Q Consensus 240 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~ 317 (461)
++.+ .+. +.+.+++..|.+++.++....++..+..++|.|+ +++|.++.+++.......+.+.+.|
T Consensus 204 -------~~~~~~~~-----~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R 271 (417)
T COG2223 204 -------KPQLPAQL-----KAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR 271 (417)
T ss_pred -------cccchhHH-----HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH
Confidence 0000 111 1357899999999999999999999999999999 8899999999999999999999999
Q ss_pred hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchh
Q psy15069 318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFC-------YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLT 390 (461)
Q Consensus 318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (461)
+++|+++||+|.+|..+... ..+.++....... .+.+..+..++..+++.|.-......++..++| ++.|
T Consensus 272 p~GG~LsDR~Gg~rv~~~~f--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G 348 (417)
T COG2223 272 PLGGWLSDRIGGRRVTLAVF--VGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETG 348 (417)
T ss_pred hccchhhhhccchhHHHHHH--HHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhh
Confidence 99999999998777655332 2223332222222 234444444455555555555566667777777 5789
Q ss_pred HHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069 391 NAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 391 ~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~ 446 (461)
.+.|+....+++|++.-|...|..+|.+|+|...|++.....+++.+..+....++
T Consensus 349 ~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 349 AVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999888887766554443
No 51
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.98 E-value=1e-31 Score=272.13 Aligned_cols=377 Identities=13% Similarity=0.124 Sum_probs=275.8
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
.++..|.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||++++.+.++..++.+++++++|++.+++. |++
T Consensus 21 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 99 (485)
T TIGR00711 21 VNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIF-RVI 99 (485)
T ss_pred HHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH-HHH
Confidence 4467899999999999999999999999999999999999999999999999999999999999999999999985 999
Q ss_pred ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
+|++.+...+....++.+++| ++|++++++..++..+|..++|.+++.+.+.+|||+.|++.+.++++..++.++..|+
T Consensus 100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCC
Confidence 999999999999999999995 8899999999999999999999999999999999999999888877776665555443
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc-ccc-
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT-TCL- 243 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 243 (461)
++.++ +++.+ ..+....... ...+... ..+.++ . ...++++... ...
T Consensus 180 ~~~~~--~~~~d--~~g~~l~~~~---~~~~~~~------------------~~~~~~----~--~~~~~~~~~~~~~~~ 228 (485)
T TIGR00711 180 DKPAA--SENFD--FLGLLLLSVG---LGSLLYG------------------LSEGPE----R--GWFDSNEILILSITG 228 (485)
T ss_pred ccccc--cCCCc--HHHHHHHHHH---HHHHHHH------------------HhhCCC----C--CCCCchHHHHHHHHH
Confidence 21111 00000 0000000000 0000000 000000 0 0000000000 000
Q ss_pred -----cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhh
Q psy15069 244 -----NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSR 317 (461)
Q Consensus 244 -----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~ 317 (461)
..........++..+.+++|+|.++...+..++.....+....++|.|+ +..|+++.+.++......++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 308 (485)
T TIGR00711 229 LVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS 308 (485)
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0000000001112234578899998888888888888888888999999 4579999999999999999999999
Q ss_pred hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhh--h--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHH
Q psy15069 318 VILGYISDRPCVNRLYIYNGCLAICGAATVICA--F--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAF 393 (461)
Q Consensus 318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (461)
++.|++.||+++++. ...+..+.+++..+.. + ..+.+......++.|++.+...+.......+..|+++++++.
T Consensus 309 ~~~g~l~~r~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~ 386 (485)
T TIGR00711 309 PIAGRMGDKIDPRKL--VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGS 386 (485)
T ss_pred HHHHHHHhhcCcHHH--HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHH
Confidence 999999999765443 3344444444444433 2 124556666778899999887777777778889999999999
Q ss_pred HHHHHHHHhhhhhccceeeeeecc
Q psy15069 394 GLLLLFQGIASLVGPPIAGFLYDS 417 (461)
Q Consensus 394 g~~~~~~~~g~~~gp~i~g~l~~~ 417 (461)
|+.++...+|+.+|+.+.|.+.++
T Consensus 387 ~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 387 SLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999875
No 52
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.98 E-value=1.1e-30 Score=252.56 Aligned_cols=332 Identities=20% Similarity=0.310 Sum_probs=292.1
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
+.++.+.|.+.+++|.+..+.+++.+...++..+++++.|++.||+|||+.+..+.++..++.++..++++++.+++. |
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 94 (352)
T cd06174 16 GLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVG-R 94 (352)
T ss_pred hhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHH-H
Confidence 345677899999999999999999999999999999999999999999999999999999999999999999999885 8
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
++.|++.+...+....++.+++| |+|++++++.....++|..++|.+++.+.+..+||+.+++.++..++..+...+..
T Consensus 95 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (352)
T cd06174 95 FLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL 174 (352)
T ss_pred HHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999996 68999999999999999999999999999999999999998888776655433321
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
T Consensus 175 -------------------------------------------------------------------------------- 174 (352)
T cd06174 175 -------------------------------------------------------------------------------- 174 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh-CCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR-GVTRSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
|.++...+..++..........+.|.+.++. +.+..+.+...+...++..+++++.++
T Consensus 175 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 233 (352)
T cd06174 175 ---------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL 233 (352)
T ss_pred ---------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466677777788888888889999999655 999999999999999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHh
Q psy15069 323 ISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGI 402 (461)
Q Consensus 323 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 402 (461)
+.||+++|+. .+..+..+..++.+.....++.+..++..++.|++.+...+....++.|..|+++|++..|+.+....+
T Consensus 234 ~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (352)
T cd06174 234 LSDRLGRRRL-LLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL 312 (352)
T ss_pred HHHHHHhhhH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 9999655541 344566666677777777777788888899999999999999999999999999999999999999999
Q ss_pred hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 403 ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 403 g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
+..++|.+.|.+.|.. +|+..+.+.+++.+++.+..+
T Consensus 313 ~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 313 GGALGPLLAGLLLDTG-GYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHhccc-CcchHHHHHHHHHHHHHHHhe
Confidence 9999999999999875 599999999988888776654
No 53
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.98 E-value=2e-32 Score=276.27 Aligned_cols=397 Identities=14% Similarity=0.087 Sum_probs=261.6
Q ss_pred eeeehHHHHhHhcCC--------CccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc---c
Q psy15069 7 FGILFIEFTKVFQEG--------DGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK---N 75 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~--------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~---~ 75 (461)
++...|.+..+++.+ ..+.+++.+++.++..+++++.|++.||+|||++++.+.++..++.+++.+.. +
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALS 126 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 455677788888777 89999999999999999999999999999999999999999999998885544 3
Q ss_pred hhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHH---HHHHHhhchhHHHHHHHHH
Q psy15069 76 VITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPII---DYTVREYGWKITLLVLSVT 151 (461)
Q Consensus 76 ~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~---~~l~~~~gw~~~f~i~~~~ 151 (461)
++.+++ .|++.|+|.+...+....++.+++ +++|++++++.+.+.++|.++++.++ ..+.+..|||+.|++.++.
T Consensus 127 ~~~~~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~ 205 (481)
T TIGR00879 127 VEMLIV-GRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIP 205 (481)
T ss_pred hHHHHH-HHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence 446766 599999999999998989999999 58899999999999999999999998 5555667999999996655
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCC
Q psy15069 152 VLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVP 231 (461)
Q Consensus 152 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (461)
.++..+.. ++.|+.+....++.+.+.. ++ ..++..+. .++ .++..+. .
T Consensus 206 ~~~~~~~~-~~l~~~~~~~~~~~~~~~~-~~---------~~~~~~~~-----------~~~----~~~~~~~---~--- 253 (481)
T TIGR00879 206 AGLLFLGL-FFLPESPRWLVGKGRVEEA-RK---------SLARLRGT-----------SGE----DKELLDE---L--- 253 (481)
T ss_pred HHHHHHHH-hcCCCChHHHHHcCChHHH-HH---------HHHHHhCC-----------CCC----cHHHHHH---H---
Confidence 55444333 3344332100000000000 00 00000000 000 0000000 0
Q ss_pred CCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhh
Q psy15069 232 ESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGA 311 (461)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 311 (461)
...+.......+.....+....+.. +. .+.+.++...+..+...........+.|.+.++.|++..+.+.......+
T Consensus 254 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 330 (481)
T TIGR00879 254 -ELIDIKRSIEKRSVQPSWGSLFSST-RR-IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGA 330 (481)
T ss_pred -HHHHHHHHHHHhhccccHHHHHhcC-ch-hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 0000000000000000011111100 01 23444555555566556666677778888889999999889999999999
Q ss_pred hhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhh---h--hhh-----HHHHHHHHHHHhhhhh-hHHHHHHHHH
Q psy15069 312 ANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICA---F--CYN-----YVELAIYAGVFGAMIG-AYVGLTSVIL 380 (461)
Q Consensus 312 ~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~-----~~~~~~~~~l~g~~~~-~~~~~~~~~~ 380 (461)
+.++++++.|+++||+++|+... .++++.+++++++. . .++ .+.......+++.+.+ ...+....++
T Consensus 331 ~~~~~~~~~g~l~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (481)
T TIGR00879 331 VNFAFTFVAIFLVDRFGRRPLLL--IGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIV 408 (481)
T ss_pred HHHHHHHHHHHHHHHhcchHHHH--HHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhh
Confidence 99999999999999976555443 33344444433332 1 111 2222222333333333 3345666777
Q ss_pred HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
.|.+|+++|+++.|+.+...++|++++|.+.|.+.++.+ |...|++.+++++++++..+..
T Consensus 409 ~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 409 SEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999875 8888988888887777766543
No 54
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=2.8e-31 Score=261.17 Aligned_cols=346 Identities=10% Similarity=0.078 Sum_probs=260.6
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccc
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGL 89 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~ 89 (461)
+.+++.+++|.+..++|++.+++.+.+.+++++.|++.||+|+|+++..+.++..++.++..++++++.+++. |.+.|.
T Consensus 30 l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~ 108 (395)
T PRK10054 30 MTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLF-FALINC 108 (395)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHH
Confidence 3445667899999999999999999999999999999999999999999999999999999999999888875 677777
Q ss_pred cccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15069 90 GFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQ 168 (461)
Q Consensus 90 g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~ 168 (461)
+.+...+....+..+.+ +++|++++|+.....++|.+++|++++.+.+ +||+.+|++.+++.++..++..+..|+++.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 187 (395)
T PRK10054 109 AYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEK 187 (395)
T ss_pred HHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 66666666667777777 5789999999999999999999999998875 799999998888777665554444333211
Q ss_pred CCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCch
Q psy15069 169 PVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDD 248 (461)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (461)
+++ ++ + ++
T Consensus 188 ~~~--~~------------------------------------------------------------~----------~~ 195 (395)
T PRK10054 188 AIA--TE------------------------------------------------------------T----------GS 195 (395)
T ss_pred ccc--cc------------------------------------------------------------h----------hh
Confidence 110 00 0 00
Q ss_pred hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH---HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069 249 TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA---EQRGVTRSNASSLISIVGAANMVSRVILGYISD 325 (461)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d 325 (461)
. .+. .+.+|+|.++...+..++.......+..+.+.+. ++.+.+....+..+....+.....++..|++.|
T Consensus 196 ~-~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 269 (395)
T PRK10054 196 V-WSP-----SVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLN 269 (395)
T ss_pred h-hhh-----hhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHc
Confidence 0 000 2457888888877777776666655555666665 344666777788888888888888899999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhh
Q psy15069 326 RPCVNRLYIYNGCLAICGAATVICAFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS 404 (461)
Q Consensus 326 r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 404 (461)
|.++++. +..++.+.++......+. ++.+.+.+..+++|++.+...|.....+.+..|++.++++++..+ ...+|.
T Consensus 270 ~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~ 346 (395)
T PRK10054 270 AANIRPL--MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGA 346 (395)
T ss_pred cCCchhH--HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHH
Confidence 9544443 334444445544444443 456556667788999988888888888999999999999998765 567899
Q ss_pred hhccceeeeeecccCCchHHHHHHhHHHHHHHHHH
Q psy15069 405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 405 ~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~ 439 (461)
.+||.++|.++|+.| +...|++.+...+++.++.
T Consensus 347 ~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 347 AINPLVSGVILTTLP-PWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999985 7777776655555444444
No 55
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=2e-31 Score=262.55 Aligned_cols=361 Identities=15% Similarity=0.212 Sum_probs=263.6
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
.++.+.|.+.+++|.+..+.+++.+++.++..+++++.|++.||+|||+++..+.++..++.++..++++++.+++. |+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 113 (398)
T TIGR00895 35 AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLIL-RF 113 (398)
T ss_pred HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHH-HH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999998875 89
Q ss_pred cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
+.|++.+...+...+.+.+++| ++|++++++...+..+|..+++.+.+.+.+.+|||+.|++.+++.++..++.++..|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T TIGR00895 114 LAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLP 193 (398)
T ss_pred HHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCC
Confidence 9999999999999999999996 789999999999999999999999999999999999999987776666555555444
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
+++....++++ ++. +++.++..+. .+.+ .+. ..+++++
T Consensus 194 ~~~~~~~~~~~-----~~~------~~~~~~~~~~----------------------~~~~-~~~--~~~~~~~------ 231 (398)
T TIGR00895 194 ESIDFLVSKRP-----ETV------RRIVNAIAPQ----------------------MQAE-AQS--ALPEQKA------ 231 (398)
T ss_pred CCChHHHhcCH-----HHH------HHHHHHHHHh----------------------cccc-ccc--ccccccc------
Confidence 43211100000 000 0000000000 0000 000 0000000
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYIS 324 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 324 (461)
..+..+...+.... ..+.+..+.+.+..++.....+....++|.+.++.|.+..+.+...+...++.++++++.|++.
T Consensus 232 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (398)
T TIGR00895 232 TQGTKRSVFKALFQ--GKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLA 309 (398)
T ss_pred ccchhhHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111111 1123344555555556666677777888977789999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069 325 DRPCVNRLYIYNGCLAICGAATVIC-AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA 403 (461)
Q Consensus 325 dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 403 (461)
||++++ +. ... ..+.++...+. ...++.+..++..++.|++.+...+...+++.|.+|+++|+++.|+.+....+|
T Consensus 310 ~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 386 (398)
T TIGR00895 310 DRLGPR-VT-ALL-LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLG 386 (398)
T ss_pred hhcchH-HH-HHH-HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 997654 22 222 22222222222 224566667778889999999999999999999999999999999999999999
Q ss_pred hhhccceeeee
Q psy15069 404 SLVGPPIAGFL 414 (461)
Q Consensus 404 ~~~gp~i~g~l 414 (461)
.++||.+.|++
T Consensus 387 ~~~g~~~~G~l 397 (398)
T TIGR00895 387 AIIGPILAGYL 397 (398)
T ss_pred HHHHHHhHHhc
Confidence 99999999876
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=2.5e-30 Score=254.70 Aligned_cols=345 Identities=13% Similarity=0.098 Sum_probs=245.1
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
.+....|.+.+++|.+..+++++.+++.++..+++++.|++.||+|||+++..+.++..++.+++.++++++.+++. |+
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-~~ 99 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAG-RF 99 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHH-HH
Confidence 34467999999999999999999999999999999999999999999999999999999999999999999988875 89
Q ss_pred cccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
++|++.+..++.....+.+++ +++|++++++.+....+|..++|++++.+.+..|||+.|++.++++++..++.++..+
T Consensus 100 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 179 (392)
T PRK10473 100 LQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILK 179 (392)
T ss_pred HHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999988888888999998 5889999999999999999999999998888899999999999888777666555544
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
+++.++ +++ +
T Consensus 180 ~~~~~~-~~~-------------------------------------------------------------~-------- 189 (392)
T PRK10473 180 ETRPAR-APA-------------------------------------------------------------A-------- 189 (392)
T ss_pred CCCCcc-cCC-------------------------------------------------------------c--------
Confidence 321110 000 0
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
...++.. .+.+|+|.++...+...+.......+..+.|.++ ++.|+++.+.+.+.+..+++.++++++.+++
T Consensus 190 --~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l 262 (392)
T PRK10473 190 --SSKPREN-----SESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFA 262 (392)
T ss_pred --cchHHHH-----HHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111 1246777776655544444444444555667776 6789999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA 403 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 403 (461)
.||+++|+... .+..+..+..+...+.++.+.......+.+.+.+...+.. ...+..|.++++ |.......++
T Consensus 263 ~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~ 335 (392)
T PRK10473 263 LGIFKPRTLML--TSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIA 335 (392)
T ss_pred HHhcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHH
Confidence 99976554433 4444444444444444444333444444444444333332 234444544332 4444445567
Q ss_pred hhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069 404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG 436 (461)
Q Consensus 404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~ 436 (461)
..+|+.+++++.++.| +.......+.+.+...
T Consensus 336 ~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~ 367 (392)
T PRK10473 336 QVCGSSLWIWLAAVLG-ISAWNMLIGILIACSI 367 (392)
T ss_pred HHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHH
Confidence 7777777777887765 5544444444443333
No 57
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=2.4e-31 Score=269.09 Aligned_cols=381 Identities=14% Similarity=0.134 Sum_probs=247.8
Q ss_pred eeehHHHHhHh--------cCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc------
Q psy15069 8 GILFIEFTKVF--------QEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA------ 73 (461)
Q Consensus 8 ~~~~~~~~~~~--------~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~------ 73 (461)
+...|.+++++ +.++.+.+++.+++.+++.+++++.|++.||+|||++++++.++..++.++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~ 111 (479)
T PRK10077 32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS 111 (479)
T ss_pred hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 34557777877 8899999999999999999999999999999999999999999999998887763
Q ss_pred ---cc---hhhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------Hh
Q psy15069 74 ---KN---VITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------RE 138 (461)
Q Consensus 74 ---~~---~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~ 138 (461)
++ ++.+++ .|+++|++.+..++...+++.|++| |+|++++++.+.+..+|.++++.++..+. +.
T Consensus 112 ~~~~~~~~~~~l~~-~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
T PRK10077 112 IGPDNTGYVPEFVI-YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNT 190 (479)
T ss_pred ccccchhHHHHHHH-HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 12 344555 5999999999999999999999995 88999999999999999999877766543 34
Q ss_pred hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccC
Q psy15069 139 YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVI 218 (461)
Q Consensus 139 ~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (461)
+|||+.|++.++..++..+.. ++.|+. |++..++ +. +++.+...+. .
T Consensus 191 ~gWr~~f~~~~~~~~~~~~~~-~~l~~s--~~~l~~~-~~-----------~~~~~~~~~~------------------~ 237 (479)
T PRK10077 191 DGWRYMFASEAIPALLFLMLL-YFVPET--PRYLMSR-GK-----------QEQAEGILRK------------------I 237 (479)
T ss_pred CChHHHHHHHHHHHHHHHHHH-HcCCCC--cHHHHHc-CC-----------HHHHHHHHHH------------------H
Confidence 699999998887777665443 334433 2210000 00 0000000000 0
Q ss_pred CccccccccCCCCCCCCcccccccccCCchhhhhHh--hhhccccccch--hHHH-HHHHHHHHhhccccchhhHhhHHH
Q psy15069 219 STQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLR--EMLDMELLRDP--IFIL-FTISNIFTSIGFNVPYVYIVKLAE 293 (461)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 293 (461)
+ ++++.++. .++.+...+ +......+... .+.. .....+....+++....+.|.+.+
T Consensus 238 ---------~----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~ 299 (479)
T PRK10077 238 ---------M----GNTLATQA-----LQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK 299 (479)
T ss_pred ---------c----CChhHHHH-----HHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH
Confidence 0 00000000 000000000 00000111111 0111 112223333444455667788888
Q ss_pred HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hh-H-HHHHHHHHHHhhhh
Q psy15069 294 QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YN-Y-VELAIYAGVFGAMI 369 (461)
Q Consensus 294 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~l~g~~~ 369 (461)
+.|++.....+.....++..+++.++.++++||+++|+.. ..+.++.+++.+++... .+ . .......++++++.
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~--i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 377 (479)
T PRK10077 300 TLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ--IIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF 377 (479)
T ss_pred HcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH--HHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 8999988788887888899999999999999997655443 34444444444333221 11 1 12233444455444
Q ss_pred hh-HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee------eeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 370 GA-YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG------FLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 370 ~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g------~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+. ..+..+.++.|.+|+++|+++.|+.+....++.++++.+.+ ++.|..+ +...|++.+++.+++++..+..
T Consensus 378 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 378 AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred hccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHhc
Confidence 43 34677889999999999999999999999999888855544 4556654 6778888787777776665544
Q ss_pred H
Q psy15069 443 P 443 (461)
Q Consensus 443 ~ 443 (461)
.
T Consensus 457 ~ 457 (479)
T PRK10077 457 V 457 (479)
T ss_pred c
Confidence 3
No 58
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=9.3e-31 Score=260.99 Aligned_cols=335 Identities=16% Similarity=0.171 Sum_probs=231.3
Q ss_pred eeeeehHHHHhHhcCCCccHHHHH-HHHH-----HhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhh-
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIA-SILV-----GVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVIT- 78 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-s~~~-----~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~- 78 (461)
.+++..|.+.++++.++.+.+... +... +...+++++.|.+.||+|||++++.+.++.+++.++++++++++.
T Consensus 33 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~ 112 (434)
T PRK15075 33 LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATI 112 (434)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHH
Confidence 467889999999999988875443 3322 222467899999999999999999999999999999999999874
Q ss_pred -------HHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--------Hhhchh
Q psy15069 79 -------LCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYGWK 142 (461)
Q Consensus 79 -------l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~gw~ 142 (461)
+++ .|+++|++.+..++....++.+++| ++|++++++...+.++|..+++.++..+. +.+|||
T Consensus 113 ~~~~~~~l~~-~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr 191 (434)
T PRK15075 113 GLAAPLLVLL-GRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWR 191 (434)
T ss_pred HHHHHHHHHH-HHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchH
Confidence 344 5999999999999888889999995 88999999999988888888888777763 468999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccc
Q psy15069 143 ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQA 222 (461)
Q Consensus 143 ~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (461)
++|++..... .. .++.+... |++++.. +
T Consensus 192 ~~f~~~~~~~-~~---~~~~~~~~--~e~~~~~---------------------------------------------~- 219 (434)
T PRK15075 192 IPFLIGCLIV-PF---IFLIRRSL--EETEEFL---------------------------------------------A- 219 (434)
T ss_pred HHHHHHHHHH-HH---HHHHHHhc--CCCHHHH---------------------------------------------H-
Confidence 9998743322 11 11121111 1100000 0
Q ss_pred cccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHH-HHHHHHHhhccccchhhHhhHHHH-hCCCch
Q psy15069 223 QIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILF-TISNIFTSIGFNVPYVYIVKLAEQ-RGVTRS 300 (461)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~ 300 (461)
++++ .+.++..+ ...++++.+.. .+..++....++....|.|.|+++ .|++..
T Consensus 220 ------------~~~~--------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~ 274 (434)
T PRK15075 220 ------------RKHR--------PSMREIFR-----SLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAA 274 (434)
T ss_pred ------------hhhc--------cccccHHH-----HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 0000 00000011 12344444433 333444555667788899999954 799999
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH-HHHH---hhhhhhHHHHHHHHHHHhhhhhhHHHHH
Q psy15069 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA-ATVI---CAFCYNYVELAIYAGVFGAMIGAYVGLT 376 (461)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 376 (461)
+.++...+..++.++++++.|+++||+++|+..+.. ..+..+ .... ....++.........+.+++.+...+..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (434)
T PRK15075 275 DSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAF--TVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAM 352 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH--HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhH
Confidence 999888889999999999999999998766544322 111111 1111 1112233333344455666777666777
Q ss_pred HHHHHHhcCccchhHHHHHHHHHHH-hhhhhccceeeeeecccCC
Q psy15069 377 SVILVDLLGLDRLTNAFGLLLLFQG-IASLVGPPIAGFLYDSTLS 420 (461)
Q Consensus 377 ~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~gp~i~g~l~~~~g~ 420 (461)
..++.|.+|++.|+++.|+.+.... +++.++|.+.|++.|+.|.
T Consensus 353 ~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 353 VVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 7788999999999999999655544 4688899999999998873
No 59
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=7.5e-32 Score=274.45 Aligned_cols=389 Identities=15% Similarity=0.170 Sum_probs=265.0
Q ss_pred CCcceeeeeehHHHHhHhcCC---CccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh
Q psy15069 1 DGVTYSFGILFIEFTKVFQEG---DGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI 77 (461)
Q Consensus 1 ~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~ 77 (461)
||..|.++.+.|.+.+|++++ +.+.+++.+++.+++.+++++.|.+.||+|||++++.+.++.+++.+++++++|++
T Consensus 102 ~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 181 (505)
T TIGR00898 102 DGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYT 181 (505)
T ss_pred CCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHH
Confidence 345566668889999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHH
Q psy15069 78 TLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAV 156 (461)
Q Consensus 78 ~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~ 156 (461)
.+++. |++.|++.+...+....++.+++| ++|+++.++...+..+|.+++|.++..+. +||+.|++.++..++..
T Consensus 182 ~~~~~-r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~ 257 (505)
T TIGR00898 182 VFLVF-RLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFF 257 (505)
T ss_pred HHHHH-HHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Confidence 99985 999999999999999999999995 78999999999999999999888876554 49999999998877766
Q ss_pred HHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCc
Q psy15069 157 LFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESEST 236 (461)
Q Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (461)
+..+ +.|+ +|++...+.+ .++..+..+. . .+.++.+ ..++.
T Consensus 258 ~~~~-~~~e--sp~~l~~~~~------------~~~a~~~l~~------------------~-----~~~~~~~-~~~~~ 298 (505)
T TIGR00898 258 LLSW-FVPE--SPRWLISQGR------------IEEALKILQR------------------I-----AKINGKK-LPAEV 298 (505)
T ss_pred HHHH-hcCC--ChHHHHHCCC------------HHHHHHHHHH------------------H-----HHHcCCC-CCHHH
Confidence 5553 3343 2221000000 0000000000 0 0000000 00000
Q ss_pred ccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhh
Q psy15069 237 EDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVS 316 (461)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g 316 (461)
.+ ... .++.+...++....+++++|.++...+...+..+........++.+.++.+.+. .......++..+++
T Consensus 299 ~~--~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~ 371 (505)
T TIGR00898 299 LS--LSL--EKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNI---YLDLFISGLVELPA 371 (505)
T ss_pred Hh--hhh--hhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCh---HHHHHHHHHHHHHH
Confidence 00 000 000000000011124677887766555544433333222223333345555543 23344567778889
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHH
Q psy15069 317 RVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNY--VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFG 394 (461)
Q Consensus 317 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g 394 (461)
.++.+++.||+|+|+. +..+.++.+++.++..+.++. +......++.+++.+..++..+.+..|.+|++.|+++.|
T Consensus 372 ~~~~~~l~dr~grr~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g 449 (505)
T TIGR00898 372 KLITLLLIDRLGRRYT--MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVG 449 (505)
T ss_pred HHHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHh
Confidence 9999999999765443 334555555555555554432 445555666777777778888899999999999999999
Q ss_pred HHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 395 LLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 395 ~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
+.+....+|++++|.+.+ +.+ . ++...+.+.+++.+++.++.+++++
T Consensus 450 ~~~~~~~ig~~i~p~i~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~lpe 496 (505)
T TIGR00898 450 VCSTMARVGSIISPFLVY-LGE-K-WLFLPLVLFGGLALLAGILTLFLPE 496 (505)
T ss_pred HHHHHHHHHHHHHhHHHH-HHH-H-HHhhHHHHHHHHHHHHHHHHHcCcC
Confidence 999999999999999998 433 3 3667777777777777777666654
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=4e-30 Score=251.91 Aligned_cols=332 Identities=13% Similarity=0.108 Sum_probs=248.9
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhc
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGF 85 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~ 85 (461)
.+...+|++.+++|.++.+.+++.+++.++..+++++.|.+.||+|||+++..+.++.+++.+++.++++++.+++. |+
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~ 87 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM-RF 87 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HH
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999998875 89
Q ss_pred cccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 86 GTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 86 l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
+.|++.+...+....++.+++| ++|++++++.+.+..+|..++|++++.+.+..|||+.|++.++++++..++..+..|
T Consensus 88 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999888888889999985 779999999999999999999999999999899999999998888777665555444
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
+++.++ ++++ .+
T Consensus 168 ~~~~~~-~~~~----------------------------------------------------------~~--------- 179 (377)
T PRK11102 168 ETLPKE-RRQP----------------------------------------------------------FH--------- 179 (377)
T ss_pred ccCccc-ccCC----------------------------------------------------------CC---------
Confidence 321111 0000 00
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
.++..+.. .+.+++|.++...+..++...+.+.+..+.|.+. ++.|.++.+.+.......++.++++++.|++
T Consensus 180 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 253 (377)
T PRK11102 180 -LRTTIRNF-----ASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF 253 (377)
T ss_pred -hHHHHHHH-----HHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111 1357788887777776666666666777777777 6689999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHH-HHHHHHHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHH-
Q psy15069 324 SDRPCVNRLYIYNGCL-AICGAATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQ- 400 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 400 (461)
.||+++++.......+ .+.++.++.....+ +.+...+...+++.+.+...+.....+.|..| ++++++.++.+...
T Consensus 254 ~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 332 (377)
T PRK11102 254 VRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRF 332 (377)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHH
Confidence 9997655544332221 22233333222222 34444444445555555555555566677766 78899999987764
Q ss_pred Hhhhhhccceeee
Q psy15069 401 GIASLVGPPIAGF 413 (461)
Q Consensus 401 ~~g~~~gp~i~g~ 413 (461)
.+|..+++.+.+.
T Consensus 333 ~~g~~~g~~~~~~ 345 (377)
T PRK11102 333 GIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHHHHHhc
Confidence 4777777776543
No 61
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.97 E-value=5.3e-30 Score=233.97 Aligned_cols=353 Identities=16% Similarity=0.162 Sum_probs=283.4
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
.+.|.+.+++.+|+|+|.++.|++.+++.++..+.+|++.++.+|+|.++.+.+++++.+++.++-... +.+.++.. -
T Consensus 29 tsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~g-t 106 (395)
T COG2807 29 TSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLG-T 106 (395)
T ss_pred hhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHH-H
Confidence 567899999999999999999999999999999999999999999999999999999999999998776 55555554 4
Q ss_pred ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
.+.|.|.+...+..+.++.++||||-+..+|++....++|..+++.+.-.+.+.. |||..+.+.+.++++..+.++...
T Consensus 107 ~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~ 186 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA 186 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc
Confidence 7889999999999999999999999999999999999999888888888888777 799999999999888776655432
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
..++.+. ++.
T Consensus 187 ~r~~~~~-~~~--------------------------------------------------------------------- 196 (395)
T COG2807 187 LREQAAS-IAT--------------------------------------------------------------------- 196 (395)
T ss_pred ccccccc-ccc---------------------------------------------------------------------
Confidence 1110000 000
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
. .....++.|+|.-|.+.+.+.+++..+|....|+|.++.|.|+|..++|.+.+...+.++...+....+
T Consensus 197 -------~---~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~l 266 (395)
T COG2807 197 -------K---LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLL 266 (395)
T ss_pred -------c---cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 0 000114789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHh
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGI 402 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 402 (461)
.+|...+|.. .......+.+++..+.+.+.. ..+..+++.|++.|..+++...++.+..+ +++.++-.|+.+.++++
T Consensus 267 a~R~~n~r~~-~~~~~~~~l~G~~G~~~~P~~-~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl 344 (395)
T COG2807 267 ARRSKNQRPL-VVLALLLMLVGLVGLLLAPGQ-LPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL 344 (395)
T ss_pred HHHhcccchH-HHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH
Confidence 9985333333 323333333333333343322 12223689999999999999988877765 45566677888888888
Q ss_pred hhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 403 ASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 403 g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
-..+||.+.|++.|.+|||+..++..+...++..+.-+.
T Consensus 345 lAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 345 LAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 889999999999999999999998877777666655543
No 62
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=8.8e-30 Score=249.79 Aligned_cols=342 Identities=14% Similarity=0.033 Sum_probs=255.9
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcc----eeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCR----NVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r----~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
.++|.+.+|+|.|..++|++.+++.+...+++|+.|++.||+||| +.+..+..+. .......++++|.+++. |
T Consensus 25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~-~ 101 (382)
T PRK11128 25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVA-I 101 (382)
T ss_pred hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHH-H
Confidence 345578999999999999999999999999999999999999983 3333222222 22334456889998874 8
Q ss_pred ccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
++.|++.+...+...++..++ .++|+++++......++|..++|++++.+.+.+|||.+|++.++..+...+ ..+..|
T Consensus 102 ~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~ 179 (382)
T PRK11128 102 GLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRP 179 (382)
T ss_pred HHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccC
Confidence 999998888888776665554 677899999999999999999999999999999999999887765444333 233333
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
+++ +++++++ +.
T Consensus 180 ~~~-~~~~~~~------------------------------------------------------------~~------- 191 (382)
T PRK11128 180 TIM-PQGESRQ------------------------------------------------------------QE------- 191 (382)
T ss_pred CCC-Ccccccc------------------------------------------------------------cc-------
Confidence 221 1100000 00
Q ss_pred CCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069 245 LSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYIS 324 (461)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 324 (461)
++.+.+. ++++|+|.+|...+..++..........+.|.|+++.|.+..+.+.+.+...++.++..++.|++.
T Consensus 192 --~~~~~~~-----~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 264 (382)
T PRK11128 192 --SAGWPAW-----KALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLF 264 (382)
T ss_pred --ccccchH-----HHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111 246889999988887777777777788888999988999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH-HHHHhh
Q psy15069 325 DRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL-LFQGIA 403 (461)
Q Consensus 325 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g 403 (461)
||++.++. +..+.+..++..+...+.++.+.+++..++.|++.+...+....++.+. +++++++..++.+ ...++|
T Consensus 265 ~r~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 341 (382)
T PRK11128 265 RRWSARDL--LLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGS 341 (382)
T ss_pred HHCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHH
Confidence 99654444 4456666666666666778888888889999999998888888888886 5566789999887 445678
Q ss_pred hhhccceeeeeecccCCchHHHHHHhHHHHHH
Q psy15069 404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVS 435 (461)
Q Consensus 404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~ 435 (461)
..+||.++|.++|+.| + ..++..+++.+.+
T Consensus 342 ~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 342 IAIMTVLSGFLYQHLG-A-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHH
Confidence 8999999999999986 4 3555555554443
No 63
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=4.3e-30 Score=253.34 Aligned_cols=343 Identities=16% Similarity=0.118 Sum_probs=259.3
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhc---ccchhhHHHHhh
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVF---AKNVITLCITIG 84 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~---~~~~~~l~i~~~ 84 (461)
+++.|++++++|.++.+.|++.+.+.+++.+++++.|++.||+|+|+++..+.++++++.++... .++++.+++. |
T Consensus 23 ~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~-~ 101 (410)
T TIGR00885 23 NPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVG-L 101 (410)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH-H
Confidence 57899999999999999999999999999999999999999999999999999999999988543 4678888874 8
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH--------------------------
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR-------------------------- 137 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-------------------------- 137 (461)
++.|+|.+...+.....+.+..| ++|++++++.+...++|..++|.++..+..
T Consensus 102 ~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (410)
T TIGR00885 102 FILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSD 181 (410)
T ss_pred HHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHH
Confidence 99999999999988888888774 779999999999999999999999988753
Q ss_pred hhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCccc
Q psy15069 138 EYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEV 217 (461)
Q Consensus 138 ~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (461)
..+||++|++.+++.++..++..+. +.|+.+++++++
T Consensus 182 ~~~w~~~fl~~a~~~~~~~~~~~~~-~~p~~~~~~~~~------------------------------------------ 218 (410)
T TIGR00885 182 LASVQTPYMIIGAVVLAVALLIMLT-KMPALNHSDAKQ------------------------------------------ 218 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCcccccc------------------------------------------
Confidence 2479999999999877665444332 222111100000
Q ss_pred CCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh--
Q psy15069 218 ISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR-- 295 (461)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (461)
.+.+... .+++|+|+++...+..++..........+++.|.++.
T Consensus 219 -----------------------------~~~~~~~-----~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~ 264 (410)
T TIGR00885 219 -----------------------------ISFSASL-----SRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIP 264 (410)
T ss_pred -----------------------------ccchhhH-----HHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 0000011 1357888888888888887777777788999999655
Q ss_pred CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHH
Q psy15069 296 GVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGL 375 (461)
Q Consensus 296 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 375 (461)
+.+....+...+.......+|+++++++.||++.++ ++.++.++..+..++..+.++... ....++.|++.+..+|.
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~--~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~ 341 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK--VLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPT 341 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHH
Confidence 444455566677777888999999999999964444 344455555555555555555433 55677888899999999
Q ss_pred HHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc-----CCchHHHHHHhHHHH
Q psy15069 376 TSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST-----LSYSPAFFLAGGAIF 433 (461)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~-----g~~~~~f~~~~~~~l 433 (461)
..++..+..+++....+.++.... +|++++|++.|++.|.. |+++..|++...+.+
T Consensus 342 i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 342 IYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 999999999866544455544443 99999999999999954 467778876544433
No 64
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=1.1e-29 Score=250.01 Aligned_cols=347 Identities=13% Similarity=0.098 Sum_probs=240.1
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceee-ehhhHHHHHHHHHhhcccchhhHHHHhhcccc
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVT-ICGAILGSACLAVSVFAKNVITLCITIGFGTG 88 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~-~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G 88 (461)
+-+++.+++|.+.+++|++.+...+...+.+++.+.+.||+|+|+.+ ..+.++.+++..+.+++++++.+++..+++.|
T Consensus 38 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 117 (393)
T PRK15011 38 LSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSS 117 (393)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34456788999999999998876554444444554459999999874 56666667788888899999988765344444
Q ss_pred ccccccchhHHHHHHhhhh-ccc--hhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 89 LGFGLIYLPAIVSVTCYFE-RLR--SLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 89 ~g~~~~~~~~~~~~~~~f~-~~r--g~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
.+ +...+....+..++.+ ++| +..+++.+++.++|.+++|++++.+.+.+|||.+|++.++.+++..+..++..|+
T Consensus 118 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 118 FG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 43 4455666666666654 333 3445788899999999999999999999999999999998887776665555554
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
.+.+++ .. +++.
T Consensus 197 ~~~~~~--~~---------------------------------------------------------~~~~--------- 208 (393)
T PRK15011 197 MRKELP--LA---------------------------------------------------------TGTL--------- 208 (393)
T ss_pred cCCCCc--cc---------------------------------------------------------cccc---------
Confidence 321110 00 0000
Q ss_pred CchhhhhHhhhhccccccc-hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 246 SDDTKQTLREMLDMELLRD-PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
+ . ..++ +..+......++.....+.+..+.|.|+ +++|++..+.+.+.+...+..++++++.|++
T Consensus 209 -~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l 275 (393)
T PRK15011 209 -E---A---------PRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYF 275 (393)
T ss_pred -c---c---------cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0011 1122222333333344455567899888 6689999999998888888889999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069 324 SDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA 403 (461)
Q Consensus 324 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 403 (461)
+||+++|+... .+.....+.+......++.+...+..++.+++.+...+..+....|.+| ++++++.++.+...++|
T Consensus 276 ~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg 352 (393)
T PRK15011 276 AKRLGKRFLMR--VAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVG 352 (393)
T ss_pred HHHhChHHHHH--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHH
Confidence 99987665433 3333333333333345566666666666777777666666777889888 56899999999999999
Q ss_pred hhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 404 SLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 404 ~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
..+||.++|.+.|..| |+..|.+.+++.+++.+..+..
T Consensus 353 ~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 353 WIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999875 9999988887777777666544
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=1.4e-30 Score=256.14 Aligned_cols=351 Identities=18% Similarity=0.192 Sum_probs=253.2
Q ss_pred eeeeeehHHHHhHhc--CCCccHHHHHHHH-----HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchh
Q psy15069 5 YSFGILFIEFTKVFQ--EGDGVTSWIASIL-----VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVI 77 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~--~~~~~~~~~~s~~-----~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~ 77 (461)
+.++...+.+.+++. .++++.+.+.+.. .+...+++++.|++.||+|||+++..+.++..++.++++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 89 (394)
T TIGR00883 10 YLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYA 89 (394)
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChh
Confidence 456667777777754 5566676655543 333356889999999999999999999999999999999999876
Q ss_pred h--------HHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHH--------Hhhc
Q psy15069 78 T--------LCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTV--------REYG 140 (461)
Q Consensus 78 ~--------l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--------~~~g 140 (461)
. +++ .|+++|++.+...+....++.+++ +|+|++++++.+.+..+|.++++.+...+. +.+|
T Consensus 90 ~~~~~~~~~~~~-~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~ 168 (394)
T TIGR00883 90 TIGIWAPILLLL-ARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWG 168 (394)
T ss_pred hhHHHHHHHHHH-HHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccc
Confidence 3 444 599999999999999999999999 588999999999999999999998887664 3579
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCc
Q psy15069 141 WKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVIST 220 (461)
Q Consensus 141 w~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (461)
||+.|++.+++.++...+.... ++ .++++++++
T Consensus 169 w~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~-------------------------------------------- 201 (394)
T TIGR00883 169 WRIPFLVSAVLVLIGLYLRRNL-EE--TPVFEKAQE-------------------------------------------- 201 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc-CC--ChhHHHHHh--------------------------------------------
Confidence 9999988776655443322221 21 111000000
Q ss_pred cccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchh--HHHHHHHHHHHhhccccchhhHhhHH-HHhCC
Q psy15069 221 QAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPI--FILFTISNIFTSIGFNVPYVYIVKLA-EQRGV 297 (461)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~ 297 (461)
++++ .+.+.+ +.+++++ ++...+..++.....+....++|.|+ ++.|.
T Consensus 202 ------------~~~~------------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 252 (394)
T TIGR00883 202 ------------KHKK------------KRGPIR-----ETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGL 252 (394)
T ss_pred ------------cccc------------ccCCHH-----HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 0000 000111 1233433 66666667777777777888999999 77899
Q ss_pred CchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH-HHHhhh--hhhHHHHHHHHHHHhhhhhhHHH
Q psy15069 298 TRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA-TVICAF--CYNYVELAIYAGVFGAMIGAYVG 374 (461)
Q Consensus 298 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~ 374 (461)
+..+.+.......++.++++++.|+++||+++|+.... .+....... .+.... .++.+......++.|++.+...+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 331 (394)
T TIGR00883 253 SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII-FTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTG 331 (394)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH-HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999875554332 222111111 111112 23555666667788888888888
Q ss_pred HHHHHHHHhcCccchhHHHHHH-HHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069 375 LTSVILVDLLGLDRLTNAFGLL-LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF 433 (461)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l 433 (461)
...+.+.|.+|+++|+++.++. +....+|..++|.+.|++.|+.|.|...++...+..+
T Consensus 332 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 332 PMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 9999999999999999999985 4556688889999999999998777777766655444
No 66
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=6.9e-30 Score=254.05 Aligned_cols=348 Identities=15% Similarity=0.112 Sum_probs=255.8
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hcccchhhHHHHh
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFAKNVITLCITI 83 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~~~~~~l~i~~ 83 (461)
.+.+.|++++++|.++.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++ .++++++.+++.
T Consensus 45 ~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~- 123 (438)
T PRK10133 45 NDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVG- 123 (438)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH-
Confidence 4567899999999999999999999999999999999999999999999999999999999875 578899999885
Q ss_pred hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH------------------h------
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR------------------E------ 138 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------------------~------ 138 (461)
|+++|+|.+...+.....+.++.+ ++|.+.+++.+...++|..++|.++..+.. .
T Consensus 124 r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~ 203 (438)
T PRK10133 124 LFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHS 203 (438)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHH
Confidence 999999999999999888888775 445567999999999999999988776541 0
Q ss_pred --hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcc
Q psy15069 139 --YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTE 216 (461)
Q Consensus 139 --~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (461)
.+||++|+....+.....++..+ ++.++.+++ +++
T Consensus 204 ~~~~w~~~f~~~~~v~~~~~~~~~~-~~~p~~~~~-~~~----------------------------------------- 240 (438)
T PRK10133 204 LVLSVQTPYMIIVAIVLLVALLIML-TKFPALQSD-NHS----------------------------------------- 240 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCcc-ccc-----------------------------------------
Confidence 36777776544433333222222 222211110 000
Q ss_pred cCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-H-H
Q psy15069 217 VISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-E-Q 294 (461)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 294 (461)
++++ .+..+.. ++++|+|.++...+..++.....+....|.+.|+ + .
T Consensus 241 -----------------~~~~---------~~~~~~~-----~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 289 (438)
T PRK10133 241 -----------------DAKQ---------GSFSASL-----SRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEI 289 (438)
T ss_pred -----------------cccc---------cchhhhH-----HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 0000 0000111 1357888888777777777777777778888885 4 5
Q ss_pred hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHH
Q psy15069 295 RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVG 374 (461)
Q Consensus 295 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 374 (461)
.|+++.+++..+..+.++.++|+++.|++.||+++++... .+..+..+.+++..+.++. ..+....+.|++.+..+|
T Consensus 290 ~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~--~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P 366 (438)
T PRK10133 290 PGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLA--AYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYP 366 (438)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH--HHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999976555443 3333333333333334443 234567789999999999
Q ss_pred HHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHH
Q psy15069 375 LTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFV 434 (461)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~ 434 (461)
...+...+..|+ +.+++.++.. ...+|+.++|.+.|.+.|..|+.+..|++..+..+.
T Consensus 367 ~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 367 TIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 999999998874 5678888886 455789999999999999876456677654444333
No 67
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=4.5e-29 Score=245.32 Aligned_cols=355 Identities=14% Similarity=0.036 Sum_probs=256.9
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT 87 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~ 87 (461)
.+..+.+.++++.+..+.+++.+.+.+.+.+++|+.|++.||+|||++++.+.++..++.+++.++.+. ++ .|+++
T Consensus 23 ~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~-~r~l~ 98 (393)
T PRK11195 23 LFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LL-AYGLV 98 (393)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HH-HHHHH
Confidence 345677889999999999999999999999999999999999999999999999999988887776664 44 48999
Q ss_pred cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069 88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLE 166 (461)
Q Consensus 88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~ 166 (461)
|++.+...|+..+++.+++| |+|++++|+.....++|.+++|++++.+.+. .|+.++.+.+...+...+. .+..|++
T Consensus 99 G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~-~~~l~~~ 176 (393)
T PRK11195 99 GIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALF-NLFIPRL 176 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 99999999999999999995 8899999999999999999999999999884 5888887776654444332 3333332
Q ss_pred CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069 167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS 246 (461)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (461)
+.++ +.. +++.. .. .
T Consensus 177 ~~~~--~~~----------------------------------------------------------~~~~~-~~----~ 191 (393)
T PRK11195 177 GARR--PGQ----------------------------------------------------------SWNPI-AL----L 191 (393)
T ss_pred cccc--ccc----------------------------------------------------------CCCHH-HH----H
Confidence 1110 000 00000 00 0
Q ss_pred chhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069 247 DDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISD 325 (461)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d 325 (461)
++.+... +.++++|.+.......++...........+|.++ +.+|.++.+.|++.+..+++.++++++.+++.|
T Consensus 192 ~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~ 266 (393)
T PRK11195 192 RDFFHAC-----RVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVT 266 (393)
T ss_pred HHHHHHH-----HHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0000111 1346677665544444333444444555666777 567999999999999999999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc-hhHHHHHHHHHHHhhh
Q psy15069 326 RPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR-LTNAFGLLLLFQGIAS 404 (461)
Q Consensus 326 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~ 404 (461)
|.+.++... .++ ..++..+...+.++.+...+..++.|++.+...+...+.+.+..|++. +|++.++.++..+++.
T Consensus 267 ~~~~~~~~~--~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 267 LETVLRVLP--AGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAM 343 (393)
T ss_pred CCcccchHH--HHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHH
Confidence 865444333 333 233333344455666666677778899888877777777888766554 7999999999999999
Q ss_pred hhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 405 ~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
.++..+.+.+ +..| -+..+++.+...+.++.+....+
T Consensus 344 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 344 LLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998855 5554 66677666666666655554443
No 68
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=2.5e-29 Score=247.73 Aligned_cols=330 Identities=17% Similarity=0.116 Sum_probs=253.0
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
+...+|++.+++|.|+.+.+++.+++.+++.+++++.|++.||+|||+++..+.++..++.++..++++++.+++. |++
T Consensus 27 ~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 105 (394)
T PRK11652 27 YVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAA-SAI 105 (394)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HHH
Confidence 4456899999999999999999999999999999999999999999999999999999999999999999999885 899
Q ss_pred ccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 87 TGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
.|++.+...+.......++++ ++|++++++...+..++..++|++++.+.+..|||+.|++.++..++..+...+..|+
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999988777777777778774 7899999999999999999999999999988899999999888776655544444333
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
++..+ +++
T Consensus 186 ~~~~~--~~~---------------------------------------------------------------------- 193 (394)
T PRK11652 186 TRPAD--ARR---------------------------------------------------------------------- 193 (394)
T ss_pred cCccc--cch----------------------------------------------------------------------
Confidence 21100 000
Q ss_pred CchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhhhhcc
Q psy15069 246 SDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVILGYIS 324 (461)
Q Consensus 246 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~ 324 (461)
.+.+...+ ..+|+|.++...+..+........+..+.+.++++ .|.+..+.+++.....++.++++++.+++.
T Consensus 194 -~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 267 (394)
T PRK11652 194 -TRVLASYR-----TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN 267 (394)
T ss_pred -hHHHHHHH-----HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00112222 34677777765555555555555555667777754 899999999998888899999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHh
Q psy15069 325 DRPCVNRLYIYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGI 402 (461)
Q Consensus 325 dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 402 (461)
||.+ ++......++.+..+....... ..+.+.+....++.|++.+...+.......+.+| ++++++.++.+....+
T Consensus 268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l 345 (394)
T PRK11652 268 KRFS-TLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI 345 (394)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH
Confidence 9854 2222222222222222222211 2245566667788899999889999998889887 6789999999999999
Q ss_pred hhhhccceeeeeecc
Q psy15069 403 ASLVGPPIAGFLYDS 417 (461)
Q Consensus 403 g~~~gp~i~g~l~~~ 417 (461)
|+.+++.++|.+.+.
T Consensus 346 g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 346 GSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHccCC
Confidence 999999999988764
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=1.1e-29 Score=252.27 Aligned_cols=358 Identities=14% Similarity=0.075 Sum_probs=244.7
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hccc----chh-hHH
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFAK----NVI-TLC 80 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~~----~~~-~l~ 80 (461)
.+..++.+++|++..++|++.+++.+.+.+++++.|++.||+|||++++.+..+..+..... ..++ +.+ ..+
T Consensus 32 ~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (420)
T PRK09528 32 FFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAI 111 (420)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566699999999999999999999999999999999999999887666655443211 1111 111 111
Q ss_pred HHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 81 ITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 81 i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
+ .+++.|.+.....+....+. +..++++++++|......++|..++|++++.+.+ .+|+++|++.++++++..++.+
T Consensus 112 ~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~ 188 (420)
T PRK09528 112 V-GGIYLGFGFLAGAGAIEAYI-ERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLF 188 (420)
T ss_pred H-HHHHhhhhhccchhhhhhHH-HHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHh
Confidence 1 13334433333222222222 2235677889999999999999999999998876 5999999988888776665555
Q ss_pred hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069 161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240 (461)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (461)
+.+++++.++ +.+++ +++++
T Consensus 189 ~~~~~~~~~~-~~~~~---------------------------------------------------------~~~~~-- 208 (420)
T PRK09528 189 FAKPDAPSTA-KVANA---------------------------------------------------------LGANA-- 208 (420)
T ss_pred cccccccchh-hhccc---------------------------------------------------------hhccc--
Confidence 5444321111 00000 00000
Q ss_pred ccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH----hCCCchhhHHHHHHHhhhhhhh
Q psy15069 241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ----RGVTRSNASSLISIVGAANMVS 316 (461)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~g 316 (461)
++... +.. .+.+|+|.++.+.+..++....+.....+.|.|+.+ .+.+..+.+.+.++..++..++
T Consensus 209 ----~~~~~-~~~-----~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 278 (420)
T PRK09528 209 ----SAVSL-KDA-----LALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALI 278 (420)
T ss_pred ----ccccH-HHH-----HHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Confidence 00000 111 135778887766555544444444445566766632 3566678899999999999999
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH-
Q psy15069 317 RVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL- 395 (461)
Q Consensus 317 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 395 (461)
.++.|++.||+++++... .+..+.++..++..+.++.+.++...++.|++.+...+....++.+.+|++.+++..+.
T Consensus 279 ~~~~g~l~dr~g~~~~~~--~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 356 (420)
T PRK09528 279 MFFAPFIINRIGAKNALL--LAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVG 356 (420)
T ss_pred HHHHHHHHHHhCcchhhH--HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeeh
Confidence 999999999987665543 44445555656666777888887778888888877777777888999999998888766
Q ss_pred HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
.++...+|.+++|.+.|++.|..| |+..|...+++.++..++.+..
T Consensus 357 ~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 357 FQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHH
Confidence 677788999999999999999876 9999999888877666555443
No 70
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.97 E-value=5.8e-30 Score=259.84 Aligned_cols=392 Identities=16% Similarity=0.122 Sum_probs=245.6
Q ss_pred eeehHHHHhHh-----cCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccc------h
Q psy15069 8 GILFIEFTKVF-----QEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKN------V 76 (461)
Q Consensus 8 ~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~------~ 76 (461)
+...|.+.+++ +.++.+.+++.+...+++.+++++.|++.||+|||+++.++.++..++.++++++++ +
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 115 (502)
T TIGR00887 36 SLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVM 115 (502)
T ss_pred HHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHH
Confidence 44456555542 345667899999999999999999999999999999999999999999998888766 5
Q ss_pred hhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH------------------
Q psy15069 77 ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR------------------ 137 (461)
Q Consensus 77 ~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------------------ 137 (461)
+.+++ .|+++|++.+..++....++.+++| |+|++++++.+....+|.++++.+...+..
T Consensus 116 ~~~~~-~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (502)
T TIGR00887 116 ATLCF-WRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGS 194 (502)
T ss_pred HHHHH-HHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 66776 5999999999999999999999995 889999999999999999999988876543
Q ss_pred -----hhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCC--CcccC-CCCCcccccccccccccccccccccccCCCCCc
Q psy15069 138 -----EYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVE--EPVED-GALPHLRIIIFEVKPKQRALTAVSTSIWQPSTA 209 (461)
Q Consensus 138 -----~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (461)
.++||+.|.+.++.+++..+. .++.|+ +|++ ++.++ ++..+. ..+..+.
T Consensus 195 ~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpE--Spr~l~~~~~~~~~a~~~----------~~~~~~~---------- 251 (502)
T TIGR00887 195 CVPAVDYMWRILIGFGAVPALLALYF-RLTIPE--TPRYTADVAKDVEQAASD----------MSAVLQV---------- 251 (502)
T ss_pred ccchhcccHHHHHHHHHHHHHHHHHH-HHhCCC--CHHHHHHhCcchHHHHHH----------HHHHhcc----------
Confidence 247999997766665544433 333444 3442 11110 000000 0000000
Q ss_pred CCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhcccc-ccc-hhHHHHHHHHHHHhhccccchhh
Q psy15069 210 ISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMEL-LRD-PIFILFTISNIFTSIGFNVPYVY 287 (461)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~-~~~~~~~~~~~~~~~~~~~~~~~ 287 (461)
+.+++ .+|.++.+ ++.+..+...++.+.... .+. +..+...+..+...+.++....+
T Consensus 252 -------~~~~~-----------~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 310 (502)
T TIGR00887 252 -------KIEAE-----------PDEVEKAS---TAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLN 310 (502)
T ss_pred -------ccccC-----------cccccchh---ccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 00000 00000000 000000112222211100 111 12222333444455566778888
Q ss_pred HhhHHHHhCCCchhhHH------------HHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--
Q psy15069 288 IVKLAEQRGVTRSNASS------------LISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY-- 353 (461)
Q Consensus 288 ~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 353 (461)
.|.++++.|++..+.+. ...+..++.+++.++.++++||+|+|+..+ .+..+.+++..+..+..
T Consensus 311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~--~~~~~~~~~~~~l~~~~~~ 388 (502)
T TIGR00887 311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQL--MGFFILTVLFFVLGFAYNH 388 (502)
T ss_pred cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHH--HHHHHHHHHHHHHHHHHHh
Confidence 99999888987653221 233345567778899999999987665443 33334343333333211
Q ss_pred --hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC---------Cch
Q psy15069 354 --NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL---------SYS 422 (461)
Q Consensus 354 --~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g---------~~~ 422 (461)
+...+....+...++.....+..+.+..|.+|++.|+++.|+.+....++++++|.+.+.+.|..+ ++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 468 (502)
T TIGR00887 389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMG 468 (502)
T ss_pred cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccch
Confidence 111111111111111222345666778999999999999999999999999999999999998532 245
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069 423 PAFFLAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 423 ~~f~~~~~~~l~~~~~~~~~~~~~ 446 (461)
..|.+.+++.+++.+..+++|+.+
T Consensus 469 ~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 469 HVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred HHHHHHHHHHHHHHHHheEeccCC
Confidence 677788877777766665555433
No 71
>PTZ00207 hypothetical protein; Provisional
Probab=99.97 E-value=2.1e-29 Score=252.92 Aligned_cols=433 Identities=13% Similarity=0.043 Sum_probs=289.2
Q ss_pred CcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc------cc
Q psy15069 2 GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA------KN 75 (461)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~------~~ 75 (461)
|..|+++++.|++++++|+|..+++++.++.. .++.+++++|++.||+|+|+++.++.+++++++++++++ ++
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc
Confidence 66789999999999999999999999998854 445678889999999999999999999999999999887 68
Q ss_pred hhhHHHHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHH
Q psy15069 76 VITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSA 155 (461)
Q Consensus 76 ~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~ 155 (461)
++.+++ +|++.|+|.+..++++...+.+|||++||++.|+...+.++|+.+.+++...+.. .+|+..|++++++.+++
T Consensus 120 ~~~l~l-~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 120 VVRLSV-YNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 999998 4899999999988888888999999999999999999999999887777776655 58999999999999888
Q ss_pred HHHHhhcccCCCCCCC--CcccCCCCCcc-cccccc----cccccccc--------------------------cccc--
Q psy15069 156 VLFGILLRPLEEQPVE--EPVEDGALPHL-RIIIFE----VKPKQRAL--------------------------TAVS-- 200 (461)
Q Consensus 156 ~i~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~----~~~~~~~~--------------------------~~~~-- 200 (461)
.++.+++.++++.+.+ ++.+.+..++. +...++ ++...+.. .++.
T Consensus 198 ~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~ 277 (591)
T PTZ00207 198 GILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKV 277 (591)
T ss_pred HHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 7776665555543332 11100000000 000000 00000000 0000
Q ss_pred --c--cc---CCCC-CcCCCCCc-----ccCCccccccccCCCCCCCCcccccc-cccCCchhhhhHhhhhccccccchh
Q psy15069 201 --T--SI---WQPS-TAISTGPT-----EVISTQAQIDSKATVPESESTEDKTT-CLNLSDDTKQTLREMLDMELLRDPI 266 (461)
Q Consensus 201 --~--~~---~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 266 (461)
. .. -.-+ --.+.+.. ++.++.++. .+.+...+..+++.. +.++.+..+....+ .-++.+++..
T Consensus 278 ~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-t~~q~l~~~d 354 (591)
T PTZ00207 278 GFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAK--EHVEAGEEVSAAEDKVVETDVDYIAPQFQE-TFIEGLKTAR 354 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccccc--ccccccccccccccccccccccCCCCCCcc-hHHHHHhchh
Confidence 0 00 0000 00000000 000000000 000000000000000 00000000000000 2234578889
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHh-CCCchh--hHHHHHHHhhhhhhhhhhhhhccC----CCC---cchhHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQR-GVTRSN--ASSLISIVGAANMVSRVILGYISD----RPC---VNRLYIYN 336 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~--~~~~~~~~~~~~~~g~~~~g~l~d----r~~---~~~~~~~~ 336 (461)
+|+++..+++....-..+...+..+.+.+ |.+.+. ...+.++.++.+.+||+..|.+.. |.. ..|...+.
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~ 434 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF 434 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence 99999999999888888888888888888 773433 333788999999999999999882 211 22233333
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhc-cceeeeee
Q psy15069 337 GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVG-PPIAGFLY 415 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g-p~i~g~l~ 415 (461)
+..+ +.+..+++.+.-....+++..++.|++.|..+++...++.|+|+ ++.|+-+.+.....-+|..+- ..++|.+|
T Consensus 435 ~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Y 512 (591)
T PTZ00207 435 IPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWY 512 (591)
T ss_pred HHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 3333 33433333333222578899999999999999999999999999 999999999999999998886 78899999
Q ss_pred ccc----CC--------chHHHHHHhHHHHHHHHHHHHH
Q psy15069 416 DST----LS--------YSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 416 ~~~----g~--------~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
|+- |+ ++..|++.+++++++.++...+
T Consensus 513 d~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 513 TQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 752 22 7889999999999888876554
No 72
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=9.2e-30 Score=248.28 Aligned_cols=332 Identities=15% Similarity=0.127 Sum_probs=237.2
Q ss_pred eeeeeehHH-HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc-chhhHHHH
Q psy15069 5 YSFGILFIE-FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK-NVITLCIT 82 (461)
Q Consensus 5 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~-~~~~l~i~ 82 (461)
+.++.+.|. +++++|+|+.+.+++.+++.+++.+++++.|.+.||+|||+++..+.++..++.+++++++ +++.+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 97 (366)
T TIGR00886 18 FAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLL 97 (366)
T ss_pred HHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 456778885 8999999999999999999999999999999999999999999999999999999999999 99999875
Q ss_pred hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh----------hchhHHH-HHHHH
Q psy15069 83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE----------YGWKITL-LVLSV 150 (461)
Q Consensus 83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~----------~gw~~~f-~i~~~ 150 (461)
|+++|++.+. +++...++.+++| |+|++++++.....++|..+++.++..+.+. .+||+.| ++.++
T Consensus 98 -~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~ 175 (366)
T TIGR00886 98 -RLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAG 175 (366)
T ss_pred -HHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHH
Confidence 8999998664 5666778899995 7899999999877777777777776665542 3899999 44455
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCC
Q psy15069 151 TVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATV 230 (461)
Q Consensus 151 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (461)
+.++..++.+...++.+.+++++.+.+ . +..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------------------------------------------~~~ 206 (366)
T TIGR00886 176 ILLLPALLIFFVGADTPPGKPATGKLS--F-----------------------------------------------KGA 206 (366)
T ss_pred HHHHHHHHHHHhcccCCcccccchhcc--c-----------------------------------------------ccc
Confidence 555444444443333221110000000 0 000
Q ss_pred CCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHH
Q psy15069 231 PESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIV 309 (461)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~ 309 (461)
+.+.+ .+.. .. ..+.+++|+++...+..++.....+.+..+.|.|+ +.+|+++.+.+.+.+..
T Consensus 207 --~~~~~--------~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 270 (366)
T TIGR00886 207 --RWSVG--------TGAL-GD-----QLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLG 270 (366)
T ss_pred --ccccc--------chhH-HH-----HHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 00000 0000 01 12357788888888877777777778888999999 56799999999999999
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc
Q psy15069 310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD 387 (461)
Q Consensus 310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 387 (461)
.+..++++++.|++.||+++++...........+..++.....+ +.+.......+.+++.+...+.....+.+..| +
T Consensus 271 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~ 349 (366)
T TIGR00886 271 GLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-R 349 (366)
T ss_pred HHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-h
Confidence 99999999999999999877666554443333333333333332 44444444445555555555666677778887 7
Q ss_pred chhHHHHHHHHHHHhhh
Q psy15069 388 RLTNAFGLLLLFQGIAS 404 (461)
Q Consensus 388 ~~~~~~g~~~~~~~~g~ 404 (461)
++|+++|+.+...++|+
T Consensus 350 ~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 350 ATGAVSGLVGAIGNLGG 366 (366)
T ss_pred hcccHHHHHHHhccCCC
Confidence 89999999998887763
No 73
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=1.6e-28 Score=247.69 Aligned_cols=357 Identities=14% Similarity=0.147 Sum_probs=259.1
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-----Cccee-eehhhHHHHHHHHHhhcc---cchhhH
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-----GCRNV-TICGAILGSACLAVSVFA---KNVITL 79 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~~-~~~g~~~~~~~~~l~~~~---~~~~~l 79 (461)
...|.+.++.|.+.+++|.. +.....+ +..++.|++.||+ |||+. +..+.++.+++.+.+++. ++++.+
T Consensus 33 ~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l 110 (491)
T PRK11010 33 GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWL 110 (491)
T ss_pred HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHH
Confidence 34788888899999999986 4444444 5899999999999 99885 667777777887777665 467777
Q ss_pred HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHHHHH
Q psy15069 80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLSAVL 157 (461)
Q Consensus 80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~~~i 157 (461)
.+. +++.|++.+...++..++..+++| |+|++++++...+..+|.++++.+...+.+ ..|||.+|++.++++++..+
T Consensus 111 ~~~-~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l 189 (491)
T PRK11010 111 AAL-AVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCII 189 (491)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 764 788899888888888899999995 889999999999999999999999999998 46999999999988777655
Q ss_pred HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069 158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE 237 (461)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (461)
..++ .|+++.++ +++ ++.
T Consensus 190 ~~~~-~~e~~~~~--~~~-----------------------------------------------------------~~~ 207 (491)
T PRK11010 190 ATLL-APEPTDTI--PVP-----------------------------------------------------------KTL 207 (491)
T ss_pred HHHh-cCCCcccc--ccc-----------------------------------------------------------cch
Confidence 5444 33321110 000 000
Q ss_pred cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHH-HHhhhhhh
Q psy15069 238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLIS-IVGAANMV 315 (461)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~-~~~~~~~~ 315 (461)
.+....+.+ ++++++..|...+..++..........+.++|+ ++.|++..+.+.... ...++.++
T Consensus 208 --------~~~~~~~l~-----~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~ii 274 (491)
T PRK11010 208 --------EQAVVAPLR-----DFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIV 274 (491)
T ss_pred --------hhhHHHHHH-----HHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 000011222 245666676666555655566556667778887 678999999999875 55679999
Q ss_pred hhhhhhhccCCCCcchhHHHHHHH-HHHHHHHHHhhhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHH
Q psy15069 316 SRVILGYISDRPCVNRLYIYNGCL-AICGAATVICAFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAF 393 (461)
Q Consensus 316 g~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (461)
+.+++|+++||+++++........ .+..+........ ++.+.+....++..++.+...+...++..++.+++..++.+
T Consensus 275 G~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~ 354 (491)
T PRK11010 275 GALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQF 354 (491)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 999999999997655543321111 1111122222232 34444444555655555655666778888999999999999
Q ss_pred HHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 394 GLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 394 g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
|+.+...++|..+++.+.|++.|..| |+..|.+.+++.+.+.+....+++
T Consensus 355 gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 355 ALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999875 999999999988888777766654
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=1.4e-28 Score=243.46 Aligned_cols=352 Identities=13% Similarity=0.121 Sum_probs=248.1
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCc-ceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGC-RNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~-r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
+.+.+.+.+++|.+..++|++.+++.++..+++++.|++.||+|+ |+++..+.++.+++..+..+.++++.+++. |++
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l 101 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPV-LLA 101 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-HHH
Confidence 344556677799999999999999999999999999999999965 778888888888888888898999988874 788
Q ss_pred ccccccccchhHHHHHHhhh---------hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q psy15069 87 TGLGFGLIYLPAIVSVTCYF---------ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVL 157 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f---------~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i 157 (461)
.|++.+...+...++...+. +..|.+..| .+|.+++|.+++.+....+|+ +|++.+++.++..+
T Consensus 102 ~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~ 174 (418)
T TIGR00889 102 NSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGV 174 (418)
T ss_pred HHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHH
Confidence 88876665555544332221 112333333 478888888888773333454 46666666655544
Q ss_pred HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069 158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE 237 (461)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (461)
+ .+..|+++.++ +++ ++
T Consensus 175 ~-~~~~~e~~~~~--~~~----------------------------------------------------------~~-- 191 (418)
T TIGR00889 175 F-ALTLPDIPVAK--STA----------------------------------------------------------KM-- 191 (418)
T ss_pred H-HhcCCCCCCCc--ccc----------------------------------------------------------cc--
Confidence 3 33334322111 000 00
Q ss_pred cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCc--------hhhHHHHHHH
Q psy15069 238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTR--------SNASSLISIV 309 (461)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~ 309 (461)
. .++... ....+.+|+|.++.+.+..++..........+.|.++++.|.++ ...+...++.
T Consensus 192 ---------~-~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 260 (418)
T TIGR00889 192 ---------S-IKVMLG-LDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLS 260 (418)
T ss_pred ---------C-HHHHhh-hhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHH
Confidence 0 000000 00113578888888777777766655556678888888877554 5668999999
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069 310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG 385 (461)
Q Consensus 310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 385 (461)
.+..+++.++.|++.||+++|+. +..+.++.++...+..... +.+.+++..++.|++.+...+....++.|.+|
T Consensus 261 ~i~~i~~~~~~g~l~dr~g~r~~--l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p 338 (418)
T TIGR00889 261 QFSEIFFILTIPFFLKRFGIKKV--MLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVP 338 (418)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999654443 3445555555544443322 23455667788999888888888889999999
Q ss_pred ccchhHHHHHHH-HHHHhhhhhccceeeeeecccC-----CchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 386 LDRLTNAFGLLL-LFQGIASLVGPPIAGFLYDSTL-----SYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 386 ~~~~~~~~g~~~-~~~~~g~~~gp~i~g~l~~~~g-----~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
+++|++++|+.+ ....+|.++||.++|+++|+.| +|+..|.+.+++.++++++.++.-
T Consensus 339 ~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 339 VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999997 5678999999999999999865 389999988888777766655444
No 75
>KOG1330|consensus
Probab=99.96 E-value=1.7e-29 Score=237.48 Aligned_cols=345 Identities=15% Similarity=0.151 Sum_probs=252.3
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccc
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGL 89 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~ 89 (461)
..++.++.+|++++..|++.+.+.+.+++++|+.|.+.|||+||+++..|..++.++.+++++++.+|++.++ |-+.|+
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~-R~~vGi 133 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLC-RGFVGI 133 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcc
Confidence 5788999999999999999999999999999999999999999999999999999999999999999999985 999999
Q ss_pred cccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHhhcccCCC
Q psy15069 90 GFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG-WKITLLVLSVTVLSAVLFGILLRPLEE 167 (461)
Q Consensus 90 g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g-w~~~f~i~~~~~l~~~i~~~~~~~~~~ 167 (461)
|.+...+.+.+++++.|| ++|++++++++....+|..+|.+.+..+.+.-+ |||.|+..+++++++.++..++.++|+
T Consensus 134 GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 134 GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999999996 789999999999999999999888888777555 999999999999999998888877765
Q ss_pred CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCc
Q psy15069 168 QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSD 247 (461)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (461)
+.+.++.+.+. +. .++..
T Consensus 214 rga~~~~~~~~--------------------------------------------------------~~------~~~~t 231 (493)
T KOG1330|consen 214 RGARDEVDGEN--------------------------------------------------------KM------VKPFT 231 (493)
T ss_pred cccccccccCC--------------------------------------------------------cC------CCCcc
Confidence 43311110000 00 00001
Q ss_pred hhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH----HHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 248 DTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA----EQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
...+..+ .+.|++.+..-.+.+....+....+..|.|.+. +-.|.+..+..++..+...++.+|.+++|.+
T Consensus 232 s~~kDl~-----~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggii 306 (493)
T KOG1330|consen 232 SVWKDLK-----VLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGII 306 (493)
T ss_pred chHHHHH-----HHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHH
Confidence 1112222 235566666666666666666666667777654 3446677777778888999999999999999
Q ss_pred cCCCCc-----chhH---H-HHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhcCccchhHH
Q psy15069 324 SDRPCV-----NRLY---I-YNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIG-AYVGLTSVILVDLLGLDRLTNA 392 (461)
Q Consensus 324 ~dr~~~-----~~~~---~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 392 (461)
+||+.+ .+.. + -..+...+...+++++. ..+.....+.++++|.... ...+...-+..+.+|+++|.++
T Consensus 307 sd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a 386 (493)
T KOG1330|consen 307 SDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTA 386 (493)
T ss_pred HHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHH
Confidence 998421 1111 1 11122222222222222 2223333344455555433 2333444567889999999999
Q ss_pred HHHHHHHHH-hhhhhccceeeeeecccCCch
Q psy15069 393 FGLLLLFQG-IASLVGPPIAGFLYDSTLSYS 422 (461)
Q Consensus 393 ~g~~~~~~~-~g~~~gp~i~g~l~~~~g~~~ 422 (461)
+++-..+.- .|.+-+|.+.|.+.|+.-+|+
T Consensus 387 ~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 387 YALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 999877755 455556669999999876566
No 76
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=2.4e-27 Score=234.24 Aligned_cols=351 Identities=14% Similarity=0.158 Sum_probs=241.5
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-----Ccce-eeehhhHHHHHHHHHhhcc---cchhhH
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-----GCRN-VTICGAILGSACLAVSVFA---KNVITL 79 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~-~~~~g~~~~~~~~~l~~~~---~~~~~l 79 (461)
-.+|.+.++.|.|.+++|++..+... .+.+++.|+++||+ |||| ++..+.++.+++..+.++. ++++.+
T Consensus 20 ~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l 97 (402)
T PRK11902 20 GTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPL 97 (402)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHH
Confidence 34788899999999999999777665 58899999999999 8875 7888888888888777776 356766
Q ss_pred HHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh-hchhHHHHHHHHHHHHHHH
Q psy15069 80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-YGWKITLLVLSVTVLSAVL 157 (461)
Q Consensus 80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-~gw~~~f~i~~~~~l~~~i 157 (461)
++. .++.++..+...++..+++.+++| |+|++++++...+.++|.++++.++..+.+. +|||..|++.+++.++..+
T Consensus 98 ~~~-~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 98 AGL-AVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 654 567788788888888899999996 6699999999999999999999999999886 4999999999988766544
Q ss_pred HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069 158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE 237 (461)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (461)
.. +..|+++.+++ ++ ++.
T Consensus 177 ~~-~~~~e~~~~~~--~~-----------------------------------------------------------~~~ 194 (402)
T PRK11902 177 TT-LWAPEPEVPAR--PP-----------------------------------------------------------RSL 194 (402)
T ss_pred HH-HhcCCCccccc--cc-----------------------------------------------------------chh
Confidence 33 33343321110 00 000
Q ss_pred cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHh-hhhhh
Q psy15069 238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVG-AANMV 315 (461)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~-~~~~~ 315 (461)
.++.+...+ +++|+|.++.+++..++..........+.+.++ ++.|+++.+.+++....+ ++.++
T Consensus 195 --------~~~~~~~~~-----~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~ 261 (402)
T PRK11902 195 --------GEAVVGPLR-----DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIV 261 (402)
T ss_pred --------HHHHHHHHH-----HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHH
Confidence 000111222 367888888776666655544333333444444 778999999999887655 46889
Q ss_pred hhhhhhhccCCCCcchhHHHHHHH-HHHHHHHHHhhhh-hhHHHHHHHHHH----HhhhhhhHHHHHHHHHHHhcCccch
Q psy15069 316 SRVILGYISDRPCVNRLYIYNGCL-AICGAATVICAFC-YNYVELAIYAGV----FGAMIGAYVGLTSVILVDLLGLDRL 389 (461)
Q Consensus 316 g~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l----~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (461)
+.+++|++.||+++++........ .+..+.+....+. ++.+.++...++ .|++.+...+....++.+.+|.+
T Consensus 262 g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 339 (402)
T PRK11902 262 GALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT-- 339 (402)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH--
Confidence 999999999997655543322111 1111222222333 344555544433 44445555666666666666644
Q ss_pred hHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 390 TNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 390 ~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
..++.+...+++..+++.++|.++|..| |+..|.+.+++.+++.+.....
T Consensus 340 --~~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 340 --QYALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666667777777778999999986 9999999888887776655433
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=5.4e-28 Score=268.75 Aligned_cols=341 Identities=12% Similarity=0.037 Sum_probs=251.1
Q ss_pred ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeeh---hhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHH
Q psy15069 23 GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTIC---GAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAI 99 (461)
Q Consensus 23 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~---g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~ 99 (461)
...+++.+++.+.+.+++|++|.++||+|||+++.. +.+...+..++....++++++++. |+++|++.+...++..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~-~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAA-LFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHhhchHHH
Confidence 347888999999999999999999999999997533 223333333333344889999885 9999999999999999
Q ss_pred HHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCC
Q psy15069 100 VSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGA 178 (461)
Q Consensus 100 ~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (461)
+++.+++ +++|++++|+.+++.++|.+++|++++++.+..||++.|++.+++.+...++.+++ ++++.++ +..+.
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-- 206 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFI-PKTGNAA-PDLKI-- 206 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhC-CCCCCCC-CCCee--
Confidence 9999998 47899999999999999999999999999999999999855444444444433333 3221111 00000
Q ss_pred CCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhc
Q psy15069 179 LPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLD 258 (461)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (461)
..+. ..+....++
T Consensus 207 ------------------------------------------------------~~~~---------~~~~~~~~~---- 219 (1140)
T PRK06814 207 ------------------------------------------------------DRNI---------IRSTITLLK---- 219 (1140)
T ss_pred ------------------------------------------------------ccch---------HHHHHHHHH----
Confidence 0000 000111122
Q ss_pred cccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHH
Q psy15069 259 MELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNG 337 (461)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~ 337 (461)
.+.++|.+|...+..++.++....+..++|.|+ +.+|.+..+.+++.+..+++.++|+++.|+++||...++....
T Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~-- 296 (1140)
T PRK06814 220 -YAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPI-- 296 (1140)
T ss_pred -HHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehH--
Confidence 356888898888888888877778888999999 5579999999999999999999999999999987543433222
Q ss_pred HHHHHHHHHHHhhhh--------------------hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069 338 CLAICGAATVICAFC--------------------YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL 397 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 397 (461)
+.++.++..+.+.+. .+.|.+++..+++|++.+...+...+++.+.+|++.+|+++|+.+
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~ 376 (1140)
T PRK06814 297 GALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANN 376 (1140)
T ss_pred HHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHH
Confidence 222222222212221 566777778888999999888889999999999999999999999
Q ss_pred HHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069 398 LFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 398 ~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~ 438 (461)
++..++..+|+.+.|.+.+...++...+++.+++.++....
T Consensus 377 ~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 377 VLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVAIL 417 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876556777776666554444433
No 78
>KOG2533|consensus
Probab=99.96 E-value=2.3e-28 Score=241.15 Aligned_cols=360 Identities=12% Similarity=0.054 Sum_probs=254.3
Q ss_pred HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccc
Q psy15069 14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGL 93 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~ 93 (461)
+.+|.+....+.+.+.+++.++|.++++++|.|.||++..+.+....+++++-.++.+.++|++.++++ |++.|+..++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ial-r~llGl~es~ 150 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIAL-RFLLGLFESG 150 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHhcc
Confidence 458899999999999999999999999999999999999999999999999999888889999999985 9999999999
Q ss_pred cchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH------hhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069 94 IYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR------EYGWKITLLVLSVTVLSAVLFGILLRPLE 166 (461)
Q Consensus 94 ~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~------~~gw~~~f~i~~~~~l~~~i~~~~~~~~~ 166 (461)
.+|+...++..|| +++|++.+|++.+..++|.++++.++..+.+ .+||||.|++.|+++++..+..+++.|+.
T Consensus 151 ~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 151 GWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred cchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 9999999999999 6899999999999999999999999999743 57999999999999999998888888876
Q ss_pred CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069 167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS 246 (461)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (461)
|...+-..+ .|+ +. ..+. + ++ .+. ++++ +
T Consensus 231 P~~~~fl~~---~ek----------~~--~~~~------------------~--~~------~~~-~~~~---------~ 259 (495)
T KOG2533|consen 231 PSKAWFLTD---EEK----------EL--VVER------------------L--RE------SPS-GGIE---------N 259 (495)
T ss_pred hhhccccch---HHH----------HH--HHHH------------------H--Hh------ccC-CCcc---------c
Confidence 543310000 000 00 0000 0 00 000 0000 0
Q ss_pred chhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069 247 DDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISIVGAANMVSRVILGYISD 325 (461)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d 325 (461)
+..+..+ ++.+++|..|.+.+..++.....+++..|+|.++++ .|++..++..+.+...++++++.+++|+++|
T Consensus 260 ~~~~~~~-----~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsd 334 (495)
T KOG2533|consen 260 KFKWKGF-----KEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSD 334 (495)
T ss_pred ccCHHHH-----HHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHH
Confidence 0111222 246899999999999999999999999999999977 5699999999999999999999999999999
Q ss_pred CCC--cchhHHHHHHHHH-HHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc-cchhHHHHHHHHHHH
Q psy15069 326 RPC--VNRLYIYNGCLAI-CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGL-DRLTNAFGLLLLFQG 401 (461)
Q Consensus 326 r~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 401 (461)
|.. ..++......+.+ ..++...+...+..............+.....+.......+.... .++-+..+......+
T Consensus 335 r~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~ 414 (495)
T KOG2533|consen 335 RLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTG 414 (495)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchh
Confidence 953 3333333333322 223323333333333333333333334444455555555555443 344444555555555
Q ss_pred hhhhhcc-ceeeeeecccCCchHHHHHHhHH
Q psy15069 402 IASLVGP-PIAGFLYDSTLSYSPAFFLAGGA 431 (461)
Q Consensus 402 ~g~~~gp-~i~g~l~~~~g~~~~~f~~~~~~ 431 (461)
.++.++| ...+....+. .|...|......
T Consensus 415 s~~~~~~~~~~~~~ap~y-~~~~~f~~~~~~ 444 (495)
T KOG2533|consen 415 SAGAISGQLFRSLDAPRY-GWGAVFYMLVAA 444 (495)
T ss_pred HHHHhhhhhcccccCcch-hhhhHHHHHHHH
Confidence 5555544 3344444433 366677443333
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=1.6e-27 Score=235.06 Aligned_cols=354 Identities=13% Similarity=0.085 Sum_probs=247.9
Q ss_pred ehHHH-HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHh---hccc-----chhhHH
Q psy15069 10 LFIEF-TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVS---VFAK-----NVITLC 80 (461)
Q Consensus 10 ~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~---~~~~-----~~~~l~ 80 (461)
++|.+ .+++|.+..+.|++.+++.+.+.+++++.|++.||+|||+.++.+.+..+++.... .+.+ .++.++
T Consensus 24 ~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 24 FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34444 55689999999999999999999999999999999999999988776665544321 2221 122233
Q ss_pred HHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 81 ITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 81 i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
+ .|++.|++.+...+....+..+. .++++...|......++|.+++|++++.+.+ +|||.+|++.+++.++..++.+
T Consensus 104 ~-~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 104 V-GGLYLGFVFSAGAGAIEAYIEKV-SRNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred H-HHHHHHHHhccchhhHHHHHHHh-hhhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence 3 36777877776666655444332 2445667788888889999999999887765 6999999999888887665554
Q ss_pred hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069 161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240 (461)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (461)
...+++ +++++.+++ .+++++
T Consensus 181 ~~~~~~--~~~~~~~~~------------------------------------------------------~~~~~~--- 201 (396)
T TIGR00882 181 FAKPKA--PSSATVANA------------------------------------------------------LGANAS--- 201 (396)
T ss_pred HhCCCC--chhhhhhcc------------------------------------------------------cccccC---
Confidence 444332 111000000 000000
Q ss_pred ccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh----CCCchhhHHHHHHHhhhhhhh
Q psy15069 241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR----GVTRSNASSLISIVGAANMVS 316 (461)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~s~~~~~~~~~~~~~~~~~g 316 (461)
+.+. ++.. +.+|||.++.+.+..++....+.....+.+.|+++. +.+....+...+...+...++
T Consensus 202 -----~~~~-~~~~-----~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~ 270 (396)
T TIGR00882 202 -----AFSL-KLAL-----ELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALI 270 (396)
T ss_pred -----CCCH-HHHH-----HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence 0000 1122 467888887766666555555555556777777443 456667888899999999999
Q ss_pred hhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH-
Q psy15069 317 RVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL- 395 (461)
Q Consensus 317 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 395 (461)
.+..|++.||+++|+..+ ++..+.++...+....++.+.+++..++.|++..........+..+..+++.+++..+.
T Consensus 271 ~~~~g~l~~r~g~~~~l~--~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~ 348 (396)
T TIGR00882 271 MFCAPLIINRIGAKNALL--IAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIG 348 (396)
T ss_pred HHHHHHHHHHhccchhHH--HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHH
Confidence 999999999977665443 44555555555555667788777788888888766666666677788888888887766
Q ss_pred HHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHH
Q psy15069 396 LLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 396 ~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~ 439 (461)
.+....+|++++|.+.|++.|..| |+..|.+.+++.++..+..
T Consensus 349 ~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 349 FQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999875 9999999888877766554
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=1.1e-26 Score=225.70 Aligned_cols=316 Identities=11% Similarity=0.063 Sum_probs=234.5
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-----Cccee-eehhhHHHHHHHHHhhcc---cchh
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-----GCRNV-TICGAILGSACLAVSVFA---KNVI 77 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----G~r~~-~~~g~~~~~~~~~l~~~~---~~~~ 77 (461)
++...|.+.+|+|+|.+++|+..+. .....+ +++.|++.||+ ||||. ++.+.++.+++....++. .+++
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 4567899999999999999999655 445554 99999999998 89886 567788888887777777 3555
Q ss_pred hHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhc--------hhHHHHHH
Q psy15069 78 TLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG--------WKITLLVL 148 (461)
Q Consensus 78 ~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g--------w~~~f~i~ 148 (461)
.+.+. +++.+.+.+...++..+++.+++ +|+|++++++...+.++|.+++++++..+.+..| ||.+|++.
T Consensus 85 ~l~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ 163 (356)
T TIGR00901 85 LLAGL-AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT 163 (356)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence 55553 56777878888888888999999 5899999999999999999999999999998888 99999988
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccC
Q psy15069 149 SVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKA 228 (461)
Q Consensus 149 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (461)
++..++..+..++..++++.+++ .+
T Consensus 164 ai~~l~~~~~~~~~~~e~~~~~~--~~----------------------------------------------------- 188 (356)
T TIGR00901 164 ALLILPGLLVTLFLAKEPQEDAS--VP----------------------------------------------------- 188 (356)
T ss_pred HHHHHHHHHHHHHhccCCCcccc--cc-----------------------------------------------------
Confidence 88777655544444443211100 00
Q ss_pred CCCCCCCcccccccccCCchhhhhHhhhhccccccchh---HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHH
Q psy15069 229 TVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPI---FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSL 305 (461)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 305 (461)
+++ .++.+...+ .++++|. ++.+.+..++.....+....+.|.|+++.|+++.+.+.+
T Consensus 189 -----~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~ 249 (356)
T TIGR00901 189 -----KPL---------TQAVLKPIR-----EFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALV 249 (356)
T ss_pred -----hhH---------HHHHHHHHH-----HHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 000 000111222 2455554 666777777777778888899999997799999999988
Q ss_pred HHHHh-hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHHHHHHHhhhhhhHH
Q psy15069 306 ISIVG-AANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC-----------YNYVELAIYAGVFGAMIGAYV 373 (461)
Q Consensus 306 ~~~~~-~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~g~~~~~~~ 373 (461)
....+ ++.+++.+++|++.||+++++..+ .++++.++...+..+. ++.+.+....++.+++.+...
T Consensus 250 ~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 327 (356)
T TIGR00901 250 AKINGLLGAILGGLIGGIIMQPLNILYALL--LFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGT 327 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHHHHH--HHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHH
Confidence 88766 578899999999999976555543 3333334333332222 344556666778899999999
Q ss_pred HHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069 374 GLTSVILVDLLGLDRLTNAFGLLLLFQG 401 (461)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 401 (461)
+...+++.|.+|++++|+.+|+.+...+
T Consensus 328 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 328 VAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999999999999999887754
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.8e-26 Score=257.30 Aligned_cols=355 Identities=11% Similarity=0.047 Sum_probs=255.1
Q ss_pred ehHHHHhHhcCCCc--cHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHH---hhcccchhhHHHHhh
Q psy15069 10 LFIEFTKVFQEGDG--VTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAV---SVFAKNVITLCITIG 84 (461)
Q Consensus 10 ~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l---~~~~~~~~~l~i~~~ 84 (461)
+.+.+..+++.+.. ..+++.+++.+++.++++++|.++||+|||++++.+.++..++.++ +.+.++++.+++ .|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r 110 (1146)
T PRK08633 32 IQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFA-VT 110 (1146)
T ss_pred HHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH-HH
Confidence 34555666776544 4799999999999999999999999999999999888766555544 344578888887 48
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh--------h-chhHHHHHHHHHHHH
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--------Y-GWKITLLVLSVTVLS 154 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--------~-gw~~~f~i~~~~~l~ 154 (461)
+++|++.+...++..+++.+++| ++|++++|+...+.++|.++++++++.+.+. + +|++.+.+..+...+
T Consensus 111 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (1146)
T PRK08633 111 FLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAV 190 (1146)
T ss_pred HHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHH
Confidence 99999999999999999999995 8899999999999999999999999999876 2 344444444433333
Q ss_pred HHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCC
Q psy15069 155 AVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESE 234 (461)
Q Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (461)
..++..+..|+.+.+. ....+ +.
T Consensus 191 ~~~~~~~~~~~~~~~~--~~~~~-------------------------------------------------------~~ 213 (1146)
T PRK08633 191 LGLIFAYRLPKVPAAA--PEVFD-------------------------------------------------------KK 213 (1146)
T ss_pred HHHHHHhcCcCCCCCC--ccccc-------------------------------------------------------cc
Confidence 3333233333221111 00000 00
Q ss_pred CcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCch-hhHHHHHHHhhh
Q psy15069 235 STEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRS-NASSLISIVGAA 312 (461)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~-~~~~~~~~~~~~ 312 (461)
+.. .....+.... .++++|.++...+..++..........++|.|+ +.+|++.. +.+++.+...++
T Consensus 214 ~~~-------~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig 281 (1146)
T PRK08633 214 KYL-------FPKLLWRNLK-----LLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIG 281 (1146)
T ss_pred ccc-------cHHHHHHHHH-----HHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHH
Confidence 000 0001111222 356788888777777766666667778888888 67899998 999999999999
Q ss_pred hhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069 313 NMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA 392 (461)
Q Consensus 313 ~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (461)
.+++.++.|++.||++.++... ++.++.+++++++.+..+.+.+++..+++|++.+...+...+++.+.+|++.||++
T Consensus 282 ~~~g~~~~g~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~ 359 (1146)
T PRK08633 282 IGIGSLLAGRLSGRHIELGLVP--LGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKV 359 (1146)
T ss_pred HHHHHHHHHHHhCCceEccchh--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhh
Confidence 9999999999999965544333 34444555555555666777777888899999998888888999999999999999
Q ss_pred HHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069 393 FGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG 436 (461)
Q Consensus 393 ~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~ 436 (461)
+|+.+++..+|.++++.+++.+.....++...+++.+.+.++..
T Consensus 360 ~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 403 (1146)
T PRK08633 360 LAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGT 403 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999999999988887776655422235555655555444433
No 82
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=2.4e-26 Score=230.30 Aligned_cols=356 Identities=13% Similarity=0.106 Sum_probs=275.7
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc-----cchhhHHHHh
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA-----KNVITLCITI 83 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~-----~~~~~l~i~~ 83 (461)
+..+-++.+..-|+..++++..+..+...+.++++|.++||++||++++.+-++..+..++.++. .+.|.+++.
T Consensus 31 va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~- 109 (524)
T PF05977_consen 31 VALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLIL- 109 (524)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHH-
Confidence 34566777788889999999999999999999999999999999999999988776655443322 367777764
Q ss_pred hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILL 162 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~ 162 (461)
.++.|++.+...|+..+++.+..| ++...++++.....++.-++||.+++.++..+|-.++|.+.++..++.+++...+
T Consensus 110 ~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 110 TFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 689999999999999999999996 6789999999999999999999999999999999999998887766655544444
Q ss_pred ccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069 163 RPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC 242 (461)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (461)
+++.+ +++ ..+ |.-
T Consensus 190 ~~~~~-~~~-~~~-----------------------------------------------------------e~~----- 203 (524)
T PF05977_consen 190 KPPPP-PSS-LPR-----------------------------------------------------------ERF----- 203 (524)
T ss_pred ccccc-ccc-cch-----------------------------------------------------------hhh-----
Confidence 33221 110 000 000
Q ss_pred ccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069 243 LNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILG 321 (461)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g 321 (461)
.++.+...+- +.++|.+....+..++.++....+...+|.+. +.+|.++...|++.+..+++.++|.++.+
T Consensus 204 ---~~~l~~G~ry-----v~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~ 275 (524)
T PF05977_consen 204 ---FSALREGLRY-----VRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLP 275 (524)
T ss_pred ---hhhHHHHHHH-----HhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111122211 23345544444444444555555666788888 67899999999999999999999999999
Q ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069 322 YISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG 401 (461)
Q Consensus 322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 401 (461)
++.+|++.++. +..+.+..+++++.+.+.++.+...+..++.|++.........+.+++..|++.+|++++++.+...
T Consensus 276 ~l~~~~~~~~l--v~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~ 353 (524)
T PF05977_consen 276 RLRRRLSSRRL--VLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF 353 (524)
T ss_pred HhhcccCcchh--hHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence 99998654433 3456667777778888888998888889999999998888888999999999999999999999999
Q ss_pred hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
.+..+|..+.|.+.|..| ....+.+.++..+++.++.+..
T Consensus 354 g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999985 7777777777666666555443
No 83
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=9.1e-27 Score=232.78 Aligned_cols=332 Identities=16% Similarity=0.199 Sum_probs=239.7
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCc-ceeeehhhHHHHHHHHHhhcccch------hh
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGC-RNVTICGAILGSACLAVSVFAKNV------IT 78 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~-r~~~~~g~~~~~~~~~l~~~~~~~------~~ 78 (461)
+.+.+.+++|++..++|++.++..+...+..|+.|.+.|| +|| |+.++.+.+..+++.+++.+.++. +.
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 4566677899999999999999999999999999999998 576 446778888888888887776643 23
Q ss_pred HHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHH-------hhchhHHHHHHH
Q psy15069 79 LCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-------EYGWKITLLVLS 149 (461)
Q Consensus 79 l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-------~~gw~~~f~i~~ 149 (461)
+++ .+++.+++.++..++..++..+.. +++|+++.++.+.+..+|..+++.+...+.. ..|||+.+.+.+
T Consensus 102 ~~~-~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 102 AYI-TYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHH-HHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 333 357778887777777667666665 4889999999998888888777766665553 458999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCC
Q psy15069 150 VTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKAT 229 (461)
Q Consensus 150 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (461)
+++++..+...+..++++.+.+ ++
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~~-~~------------------------------------------------------- 204 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEIP-KN------------------------------------------------------- 204 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCCC-cc-------------------------------------------------------
Confidence 9888776655544433211000 00
Q ss_pred CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHHHH
Q psy15069 230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLISI 308 (461)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~ 308 (461)
+++ +.+.++..+ .+++||.++.+.+..++...+.+....+.+.|.+. .+ +....+.+.++
T Consensus 205 -----~~~--------~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 265 (437)
T TIGR00792 205 -----IEK--------KLSLKQIFK-----ALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSI 265 (437)
T ss_pred -----ccc--------CCCHHHHHH-----HHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHH
Confidence 000 001112222 35789998888887777777766655555555533 34 55667777788
Q ss_pred HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC--
Q psy15069 309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-- 385 (461)
Q Consensus 309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-- 385 (461)
..++.+++.++.+++.||+++++... .+..+..+..+...+. ++.+..++..++.|++.+...+..+++++|..+
T Consensus 266 ~~i~~ii~~~~~~~l~~r~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (437)
T TIGR00792 266 AIVAGLIGVLLFPRLVKKFGRKILFA--GGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYG 343 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 88999999999999999977555443 3444444444443333 355566667788899998888888888888764
Q ss_pred -----ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 386 -----LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 386 -----~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
++++|.+.|+.+++..+|..+++.+.|.+.|..|
T Consensus 344 ~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 344 EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5668999999999999999999999999998765
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.1e-26 Score=215.48 Aligned_cols=333 Identities=17% Similarity=0.116 Sum_probs=265.8
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhh---cccchhhHHHH
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSV---FAKNVITLCIT 82 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~---~~~~~~~l~i~ 82 (461)
.-+++.|.+++.++++..+.+++..++..+|.+.++++|++++|+|+|+-++.|+.++++++.+.. -..++..++..
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~ 110 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVA 110 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 446889999999999999999999999999999999999999999999999999999999999873 45677777776
Q ss_pred hhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh-------------------hchh
Q psy15069 83 IGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-------------------YGWK 142 (461)
Q Consensus 83 ~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-------------------~gw~ 142 (461)
+ ++.|.|.+..-+++..++....+ ++..+-+++.+..+++|.+++|++++.++.. -.||
T Consensus 111 l-Fila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~ 189 (422)
T COG0738 111 L-FILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ 189 (422)
T ss_pred H-HHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh
Confidence 4 89999999999999999999884 6778889999999999999999999999872 2489
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccc
Q psy15069 143 ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQA 222 (461)
Q Consensus 143 ~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (461)
++|...+...++..+.....+.+..++.+++..
T Consensus 190 ~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~----------------------------------------------- 222 (422)
T COG0738 190 FPYLILAGLLVLLAVLILLSKLPDLQVAAPSLG----------------------------------------------- 222 (422)
T ss_pred hHHHHHHHHHHHHHHHHHhccCCcCCccccccc-----------------------------------------------
Confidence 999999888777766665554322111110000
Q ss_pred cccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchh
Q psy15069 223 QIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSN 301 (461)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~ 301 (461)
+. ++ ... .+++|+|+++...++.|+.-........|++.|+.+ .|.+..+
T Consensus 223 -------------~~---------~~--~~~-----~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~ 273 (422)
T COG0738 223 -------------AS---------GS--AGL-----SSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ 273 (422)
T ss_pred -------------cc---------cc--chH-----HHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH
Confidence 00 00 011 146899999999999999999999999999999966 8999999
Q ss_pred hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy15069 302 ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILV 381 (461)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 381 (461)
.+...+.++.+.++||+++.++..|+...| ++....+...+.++...++++.+.+ ...++.|++.+..+|...++..
T Consensus 274 aa~~~s~~~~~~~vGRFig~~lm~~~~~~k--~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal 350 (422)
T COG0738 274 AAYYLSFFWVGFMVGRFIGSALMSRIKPEK--YLAFYALIAILLLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLAL 350 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999999999954433 3334444444444555566775444 4667889999999999999999
Q ss_pred HhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069 382 DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS 420 (461)
Q Consensus 382 ~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~ 420 (461)
+..| ++ .+..|..-.+..+|+++-|++.|++.|+.|.
T Consensus 351 ~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 351 KNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred hccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhh
Confidence 9998 44 3444445556678999999999999999873
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=1.3e-25 Score=225.52 Aligned_cols=409 Identities=11% Similarity=0.019 Sum_probs=265.1
Q ss_pred eehHHHH-hH--hcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhhcccchhhHHHHhh
Q psy15069 9 ILFIEFT-KV--FQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSVFAKNVITLCITIG 84 (461)
Q Consensus 9 ~~~~~~~-~~--~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~ 84 (461)
.++|.+. ++ +|.+..+.+++.+.+.+.+.+++++.|++.|| +|||+++..+.++.+++.++.+++++++.+++. +
T Consensus 31 ~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 109 (475)
T TIGR00924 31 GILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYG-L 109 (475)
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHH-H
Confidence 3455554 44 89999999999999999999999999999999 899999999999999999999999888888775 7
Q ss_pred ccccccccccchhHHHHHHhhhh-c---cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-R---LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
++.|+|.+...+...+.+.+++| + +|+.+.++.+.+.++|.+++|++++.+.+.+|||+.|.+.++..+...+..+
T Consensus 110 ~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 110 GTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 89999999989999899999985 3 3888999999999999999999999999989999999998866555444333
Q ss_pred hcccCCC-CCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 161 LLRPLEE-QPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 161 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
+.++..+ .+++++.. .+++ .+........... ..-.. .... ..++....+ ....
T Consensus 190 ~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~-----------~~~~~-~~~~-~~~~~~~~~-~~~~ 244 (475)
T TIGR00924 190 AGRHMLRDIGSVPDPL---SGQG--------KTYGKLLLALLAA-----------LALVF-FCAW-LMHHVVIAN-ILLM 244 (475)
T ss_pred HcccccccCCCCCCCc---chhh--------hhhHHHHHHHHHH-----------HHHHH-HHHH-HHhccHHHH-HHHH
Confidence 3332211 11100000 0000 0000000000000 00000 0000 000000000 0000
Q ss_pred cccccC-CchhhhhHhh-hhccccccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchh----hHHHHHHHhhh
Q psy15069 240 TTCLNL-SDDTKQTLRE-MLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSN----ASSLISIVGAA 312 (461)
Q Consensus 240 ~~~~~~-~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~----~~~~~~~~~~~ 312 (461)
...... ....+...++ ....+..|...+..+++...+....+....+.++.+.+ +.+.+... .+++.++..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~ 324 (475)
T TIGR00924 245 TVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFW 324 (475)
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHH
Confidence 000000 0000000000 00000112233444555555666666666666777763 33433222 66888888888
Q ss_pred hhhhhhhhh----hccCC-CCcchhHHHHHHHHHHHHHHHHhhh---------hhhHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069 313 NMVSRVILG----YISDR-PCVNRLYIYNGCLAICGAATVICAF---------CYNYVELAIYAGVFGAMIGAYVGLTSV 378 (461)
Q Consensus 313 ~~~g~~~~g----~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~g~~~~~~~~~~~~ 378 (461)
.++..++.. ++.|| .+.+...-+.+++++.++++....+ ..+++++++..++.+++.....|...+
T Consensus 325 iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~ 404 (475)
T TIGR00924 325 VVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLS 404 (475)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 888877754 45554 1122222235677777766665543 358889999999999999999999999
Q ss_pred HHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 379 ILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 379 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
++.+..|++.||+.+|+......+|..+++.+.....+.. +|...|...++..++..++.+.+.+
T Consensus 405 ~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 405 WWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988777764 4777888777777766665554433
No 86
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=1.1e-25 Score=216.02 Aligned_cols=387 Identities=12% Similarity=0.074 Sum_probs=268.5
Q ss_pred eeeeeehHHHHhHhcCCCcc-HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHh
Q psy15069 5 YSFGILFIEFTKVFQEGDGV-TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~ 83 (461)
.+.++..|++.+++|+|+.+ .|.+.+++..+|.++++++|.+.||+|.|+++..+.+.+++..++.+++++++.+.+.
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~- 121 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLM- 121 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 35677899999999999999 9999999999999999999999999999999999999999999999999999999985
Q ss_pred hccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHH--HHHHHHHHHHHh
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVL--SVTVLSAVLFGI 160 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~--~~~~l~~~i~~~ 160 (461)
|++.|++.|..+ +...++..|+| ++|++++|+..++..+|.++++++++. +..+|||+-+.+. ...+..+.++..
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a 199 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLA 199 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 88899999995 899999999999999999999999999 5578999764332 223333334444
Q ss_pred hcccCCCCCC-CCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 161 LLRPLEEQPV-EEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
+++|.+++.- .++.+.. ++ +...| .++.++ ++..+.++..+
T Consensus 200 ~~LP~~~~sl~f~~~~~~--~~------~~~~~----------------------~~~~~~-------~~~~~~~~~~~- 241 (511)
T TIGR00806 200 LFLKRPKRSLFFNRLEDV--RG------ALPCE----------------------LDQMVP-------GPGGKLEDYLG- 241 (511)
T ss_pred HhCCCCchhhhhcccccc--cc------ccccc----------------------cccCCC-------CCccccchhhh-
Confidence 5556432211 0110000 00 00000 000000 00000000000
Q ss_pred cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCC-chhhHHHHHHHhhhhhhhhh
Q psy15069 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVT-RSNASSLISIVGAANMVSRV 318 (461)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~~g~~ 318 (461)
..+...-...+..+ ....+||.+..-.+-..+..++++-+..|....-++..-+ ..--|.+-++..+.+.+..+
T Consensus 242 ~~~~~~~~~l~~~~-----~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~ 316 (511)
T TIGR00806 242 TCRDSFLVRMLSEL-----VTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSF 316 (511)
T ss_pred hhhhHHHHHHHHHH-----HHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHH
Confidence 00000000111111 2346777776667777777778777777777766655332 22455666777778888999
Q ss_pred hhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHH
Q psy15069 319 ILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLL 398 (461)
Q Consensus 319 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 398 (461)
..|++-.++.+--.+.+.+..++.+..++++..++++|..++..++++..+....++...-+++....+..|...|++++
T Consensus 317 ~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtf 396 (511)
T TIGR00806 317 IAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTF 396 (511)
T ss_pred HHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHH
Confidence 99998776422224566666666777788888899999999999999999999999999988888888888999999998
Q ss_pred HHHhhhhhcccee----ee---eecccCCchHHHHHHhHHHHHHHH
Q psy15069 399 FQGIASLVGPPIA----GF---LYDSTLSYSPAFFLAGGAIFVSGV 437 (461)
Q Consensus 399 ~~~~g~~~gp~i~----g~---l~~~~g~~~~~f~~~~~~~l~~~~ 437 (461)
..-+-..+-..+. |. +.+++--|..-|...+++.++..+
T Consensus 397 vAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 397 VATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 8776666555443 22 112221355566666666555544
No 87
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=4.6e-25 Score=217.12 Aligned_cols=348 Identities=12% Similarity=0.061 Sum_probs=239.5
Q ss_pred eehHHHHhHhcCCCccHHHH--HHHHHHhhhhhhHhhHh-hhhhcCcceeeehhhHHH-HHHHHHhh---cccc-hhhHH
Q psy15069 9 ILFIEFTKVFQEGDGVTSWI--ASILVGVTLCSGPISSA-FVNKYGCRNVTICGAILG-SACLAVSV---FAKN-VITLC 80 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~g~-l~dr~G~r~~~~~g~~~~-~~~~~l~~---~~~~-~~~l~ 80 (461)
.+.|.+.+|.|.|.+++|+. .+++...-.+.+|+.++ ..||+||||..+.++.+. ++.....+ ...+ ..+++
T Consensus 22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
T TIGR02718 22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV 101 (390)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 57899999999999999997 46667777788888855 689999999965555332 21222222 2222 22222
Q ss_pred HHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069 81 ITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG 159 (461)
Q Consensus 81 i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~ 159 (461)
.. -++.++..+...+..-.+..++.+ |+++...+....+..+|.++++.+.+.+.+.+|||.+|++.+++.++..+..
T Consensus 102 ~~-~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 102 GL-LACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 22 234445555555555555566664 5668888888888899999999999999999999999999999887766655
Q ss_pred hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
++..|+++.++ +. +
T Consensus 181 ~~~~~~~~~~~--~~------------------------------------------------------------~---- 194 (390)
T TIGR02718 181 LWLKDRAVASP--EA------------------------------------------------------------P---- 194 (390)
T ss_pred HHcCCCCcCcc--cc------------------------------------------------------------c----
Confidence 55433221100 00 0
Q ss_pred cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhh-hhhhhhh
Q psy15069 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGA-ANMVSRV 318 (461)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~-~~~~g~~ 318 (461)
++.+.+. .+.+|+|.++......++..........+.+.|++|.|+++++.+.+....+. ..+++.+
T Consensus 195 -------~~~~~~~-----~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~ 262 (390)
T TIGR02718 195 -------LARRASL-----FRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCG 262 (390)
T ss_pred -------hhhHHHH-----HHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHH
Confidence 0000111 14678888887777777777777777788899998899999999999888764 6677899
Q ss_pred hhhhccCCCCcchhHHHHHHHHHHHHH-HHHhhh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc-cchhH
Q psy15069 319 ILGYISDRPCVNRLYIYNGCLAICGAA-TVICAF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGL-DRLTN 391 (461)
Q Consensus 319 ~~g~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 391 (461)
+.|++.||+++++.... +..+.++. +..... .++.+..+....+.+++.+...+.......+..++ +++++
T Consensus 263 ~~g~l~~r~g~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 340 (390)
T TIGR02718 263 GGAWLVRRAGLWRTFIL--GVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGT 340 (390)
T ss_pred HHHHHHHHhhHHHHHHH--HHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHH
Confidence 99999999776554433 22222111 111111 12233333444555666777777777777777765 78999
Q ss_pred HHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069 392 AFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 392 ~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~ 438 (461)
.+++.+...++|..+||.++|.++|..| |+..|...+++.+++.+.
T Consensus 341 ~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 341 DVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875 989998887777666543
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=6.6e-26 Score=233.82 Aligned_cols=281 Identities=17% Similarity=0.188 Sum_probs=207.7
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc------------
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK------------ 74 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~------------ 74 (461)
.+...+.+.++|+++..+.|++.+.+.+++.++.++.|++.||+|||+++.+|.++.+++.+++++++
T Consensus 52 ~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~ 131 (633)
T TIGR00805 52 VNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTV 131 (633)
T ss_pred HHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccc
Confidence 34668899999999999999999999999999999999999999999999999999999999987763
Q ss_pred ---------------------------------------chhhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhh
Q psy15069 75 ---------------------------------------NVITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLAT 114 (461)
Q Consensus 75 ---------------------------------------~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~ 114 (461)
.+..+++ .|+++|+|.+..++.+.+++++++| ++|++++
T Consensus 132 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 132 SSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLV-SQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred cccccccccccccccCCCCCCccccccccccccccCCCceehhhHH-HHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 1334444 5999999999999999999999995 8899999
Q ss_pred hhhccchhhhHHHHhHHHHHHHHhh----------------------chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q psy15069 115 GIAVCGSGLGTIIFAPIIDYTVREY----------------------GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEE 172 (461)
Q Consensus 115 gi~~~~~~lg~~i~~~l~~~l~~~~----------------------gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~ 172 (461)
++.+++..+|..+++++++.+.+.+ +|+..|++.+++.++..+..+++ |++ .|+++
T Consensus 211 ~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~-p~~-lp~~~ 288 (633)
T TIGR00805 211 GILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF-PKA-LPKEG 288 (633)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC-ccc-cCCcc
Confidence 9999999999999999999988654 27888999998887766554443 322 11110
Q ss_pred cccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhh
Q psy15069 173 PVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQT 252 (461)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (461)
++...+.+++ +.. .+. .++...+ .....+.
T Consensus 289 ~~~~~~~~~~---------------------------------------~~~--~~~---~~~~~~~-----~~~~~~~- 318 (633)
T TIGR00805 289 KRVNVDVHET---------------------------------------EKL--EKS---EDKSRKK-----NSDITKD- 318 (633)
T ss_pred cccchhhhhh---------------------------------------hcc--ccc---ccccchh-----hhhhHHH-
Confidence 0000000000 000 000 0000000 0000001
Q ss_pred HhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcc
Q psy15069 253 LREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVN 330 (461)
Q Consensus 253 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~ 330 (461)
.. ...+.+++||.++...+..++.....+.+.+|+|.|+ +++|+++.+++++.....+ +.++|.+++|++.||++.+
T Consensus 319 ~~-~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 319 FP-KIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HH-HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 00 0123579999999999999999999999999999999 5789999999999888776 5689999999999998755
Q ss_pred hhHHHHHHHHH
Q psy15069 331 RLYIYNGCLAI 341 (461)
Q Consensus 331 ~~~~~~~~~~~ 341 (461)
.+.+...++++
T Consensus 398 ~~~~~~~~~~~ 408 (633)
T TIGR00805 398 VKKAAYFAICL 408 (633)
T ss_pred HHHHHHHHHHH
Confidence 54444334333
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=2.1e-24 Score=216.79 Aligned_cols=406 Identities=13% Similarity=0.048 Sum_probs=251.1
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT 87 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~ 87 (461)
.+..++++++|.+..+.+++.+.+.....+..+++|++.|| +|||++++.|.+++.++.++++++.+...++...|+++
T Consensus 36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~ 115 (489)
T PRK10207 36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTI 115 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 34556678899999999999999998888889999999999 99999999999999999999999877555443348899
Q ss_pred cccccccchhHHHHHHhhhh-c--cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 88 GLGFGLIYLPAIVSVTCYFE-R--LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 88 G~g~~~~~~~~~~~~~~~f~-~--~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
|+|.|...+...+++.+++| + +|+++.++...+.++|..++|.+++++.+.+|||+.|++.++..+...+...+.++
T Consensus 116 ~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~ 195 (489)
T PRK10207 116 AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRG 195 (489)
T ss_pred HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcch
Confidence 99999999999999999995 3 45789999999999999999999999999999999999865533333333223221
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccccc
Q psy15069 165 LEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLN 244 (461)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (461)
..+... ++.++ .+. |... ...-..... . - --....... ............
T Consensus 196 ~~~~~~-~~~~~--~~~------d~~~---~~l~~~~~~-----------~-----~-~~~~~~~~~-~~~~~~~~~~~~ 245 (489)
T PRK10207 196 MVKDIG-SEPDH--KPM------SFSK---LLLVLLGSV-----------V-----M-IFVCAWLMH-NVEVANLVLIVL 245 (489)
T ss_pred hhcccC-CCCCc--cch------hhhh---HHHHHHHHH-----------H-----H-HHHHHHHHh-hhhHHHHHHHHH
Confidence 111100 00000 000 0000 000000000 0 0 000000000 000000000000
Q ss_pred CCchhhh-hHhhhhccccccchhHHHHH--HHHHHHhhccccchhhHhhHHHH-hCCCc----hhhHHHHHHHhhhhhhh
Q psy15069 245 LSDDTKQ-TLREMLDMELLRDPIFILFT--ISNIFTSIGFNVPYVYIVKLAEQ-RGVTR----SNASSLISIVGAANMVS 316 (461)
Q Consensus 245 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~g~s~----~~~~~~~~~~~~~~~~g 316 (461)
....... -.++....+..|+|.+.... +...+....+......++.+.++ .+.+. -....+.+...+..++.
T Consensus 246 ~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~ 325 (489)
T PRK10207 246 SIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVA 325 (489)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHH
Confidence 0000000 00000011345566544322 22333444444454566666642 22211 12344555566777788
Q ss_pred hhhhhhccCCCCcchh-----HHHHHHHHHHHHHHHHh-----hh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy15069 317 RVILGYISDRPCVNRL-----YIYNGCLAICGAATVIC-----AF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILV 381 (461)
Q Consensus 317 ~~~~g~l~dr~~~~~~-----~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 381 (461)
+++.+++.||.++|+. ..+.+++++.+++++.. .+ ..+.++++...++.|++.+...+.....+.
T Consensus 326 ~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~ 405 (489)
T PRK10207 326 SPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIA 405 (489)
T ss_pred HHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 8889999999765542 01223444444443221 11 125677778889999999999999999999
Q ss_pred HhcCccchhHHHHHHHHHHHhhhhhccceeeeeec------c---cCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 382 DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD------S---TLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 382 ~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~------~---~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
+..|++.++.++|+.++..++|+.+|..+++.... - .+.|...|...++..++..++++.+.+
T Consensus 406 ~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 406 ALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877754421 1 123677888888777766666555433
No 90
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=2e-23 Score=210.79 Aligned_cols=399 Identities=15% Similarity=0.116 Sum_probs=235.7
Q ss_pred hHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhhccc-chhhHHHHhhcccc
Q psy15069 11 FIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSVFAK-NVITLCITIGFGTG 88 (461)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~~~~-~~~~l~i~~~~l~G 88 (461)
.+++++++|.+..+.+++.+.+........+++|++.|| +|||+.+..+.++..++.+++++++ +.+.+++ .++++|
T Consensus 45 ~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~-~~~l~g 123 (500)
T PRK09584 45 AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYM-GMATIA 123 (500)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHH-HHHHHH
Confidence 344568899999999999988877766777899999999 5999999999999999999988875 4445555 478999
Q ss_pred ccccccchhHHHHHHhhhhc---cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccC
Q psy15069 89 LGFGLIYLPAIVSVTCYFER---LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPL 165 (461)
Q Consensus 89 ~g~~~~~~~~~~~~~~~f~~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~ 165 (461)
+|.|...+...+++.+++|+ +|+.++++.+.+.++|..++|++.+++.+.+|||+.|.+.++..++..+..++.++.
T Consensus 124 ig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~ 203 (500)
T PRK09584 124 VGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRW 203 (500)
T ss_pred HhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99998888888899999953 245688899999999999999999999999999999998876555444333222211
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
.+...++.++ + +. |..+ ..... .... .... ..... .+ +++..........
T Consensus 204 ~~~~~~~~~~-~--~~------~~~~---~~~~~-~~~~----------~~~~--~~~~~-~~----~~~~~~~~~~~~~ 253 (500)
T PRK09584 204 VKQYGSKPDF-E--PI------NYRK---LLLTI-VGVV----------ALIA--IATWL-LH----NQEIARMALGVVA 253 (500)
T ss_pred hccCCCCCCc-c--cc------chhh---HHHHH-HHHH----------HHHH--HHHHH-Hh----cchHHHHHHHHHH
Confidence 1110000000 0 00 0000 00000 0000 0000 00000 00 0000000000000
Q ss_pred CchhhhhHhhh-hccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH---hCCCc------hhhHHHHHHHhhhhhh
Q psy15069 246 SDDTKQTLREM-LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ---RGVTR------SNASSLISIVGAANMV 315 (461)
Q Consensus 246 ~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~s~------~~~~~~~~~~~~~~~~ 315 (461)
........... ...+.-|+| .+..++ .++....++.....+|.++.. ...+. ...++..++..+..++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil 331 (500)
T PRK09584 254 LGIVVIFGKEAFAMKGAARRK-MIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMI 331 (500)
T ss_pred HHHHHHHHHHHhhcCHHHHHH-HHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHH
Confidence 00000000000 000111222 222221 223333344444445544321 11211 1255566667766666
Q ss_pred hhhhh----hhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh---------HHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069 316 SRVIL----GYISDRPCVNRLYIYNGCLAICGAATVICAFCYN---------YVELAIYAGVFGAMIGAYVGLTSVILVD 382 (461)
Q Consensus 316 g~~~~----g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 382 (461)
..++. +++.+|.+ ....+.+++++.+++++......+ .++.+...++.|++.....|...+++.+
T Consensus 332 ~~p~~~~~~~~l~~r~~--~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~ 409 (500)
T PRK09584 332 GSPILAAIYNKMGDRLP--MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQ 409 (500)
T ss_pred HHHHHHHHHHHhCcCCC--cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 66665 66666643 333455677777777766655443 5677888899999999999999999999
Q ss_pred hcCccchhHHHHHHHHHHHhhhhhccceeeeee---------cccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY---------DSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~---------~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
..|++.||+.+|+......+|..++..+.+... ...+.+...|...++..++.+++++.+.+
T Consensus 410 ~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 410 LVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888777777666655443111 11224778888888877755555544433
No 91
>KOG0569|consensus
Probab=99.92 E-value=5.9e-24 Score=207.21 Aligned_cols=393 Identities=15% Similarity=0.115 Sum_probs=261.0
Q ss_pred HHhHhc--CCCcc----HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---cchhhHHHHhh
Q psy15069 14 FTKVFQ--EGDGV----TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---KNVITLCITIG 84 (461)
Q Consensus 14 ~~~~~~--~~~~~----~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---~~~~~l~i~~~ 84 (461)
+.+.+| .++.+ .+.+.+++.++.++++++++.++||+|||..+.++.++..++.++..++ +++..+++. |
T Consensus 45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~G-R 123 (485)
T KOG0569|consen 45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILG-R 123 (485)
T ss_pred HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-H
Confidence 345566 34433 5667778899999999999999999999999998888888887765544 577777775 9
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH--HhhchhHHHHHHHHHHHHHHHHHhh
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV--REYGWKITLLVLSVTVLSAVLFGIL 161 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~--~~~gw~~~f~i~~~~~l~~~i~~~~ 161 (461)
++.|+..+......+.++.|..| +.||....+.+.+..+|.+++..++.--+ +.-.|++.+.+..+.+++..+...+
T Consensus 124 ~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 124 LIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPF 203 (485)
T ss_pred HHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999889889999997 67999999999999999998866655432 2336998888777776665544433
Q ss_pred cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 162 LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
+ ||+|+.--.++ +.++|.+...+-.++. +..+++. +...+|.++
T Consensus 204 ~---PESPk~Ll~~k-----------~~~~~A~~sl~~y~G~-------------~~~~~~~------e~~~~e~~~--- 247 (485)
T KOG0569|consen 204 L---PESPKYLLIKK-----------GDEEEARKALKFYRGK-------------EDVEAEI------EEMLREIEE--- 247 (485)
T ss_pred C---CCCcchHHHHc-----------CCHHHHHHHHHHHhCC-------------CcchhHH------HHHHHHHHH---
Confidence 3 44555311100 0000000000000000 0000000 000000000
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILG 321 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g 321 (461)
++ ..++.+.+..++...+-+|.+....+.+....+..+.+....|...++++.|++..++.++....++.+.+.++++.
T Consensus 248 ~~-~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~ 326 (485)
T KOG0569|consen 248 EE-LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSP 326 (485)
T ss_pred hc-cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00112345566666666777766667777777788888999999999999999999999999999999999999999
Q ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHhh---hhh-hH--HHH---HHHHHHHhhhhh-hHHHHHHHHHHHhcCccchhH
Q psy15069 322 YISDRPCVNRLYIYNGCLAICGAATVICA---FCY-NY--VEL---AIYAGVFGAMIG-AYVGLTSVILVDLLGLDRLTN 391 (461)
Q Consensus 322 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~--~~~---~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 391 (461)
++.||.|||+.++. +..++.+..+++. +.. .. |.. +.+.+++.++.+ +..|+.+-+.+|++|++.|..
T Consensus 327 ~lid~~gRRpLll~--~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~a 404 (485)
T KOG0569|consen 327 FLIDRLGRRPLLLI--SLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSA 404 (485)
T ss_pred HHHHhcCCcHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHH
Confidence 99999886665543 3333333322222 111 11 222 233444444444 346788889999999999999
Q ss_pred HHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHH-HHHHHHhhHh
Q psy15069 392 AFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM-LFVIPSLQSY 448 (461)
Q Consensus 392 ~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~-~~~~~~~~~~ 448 (461)
+.++......+..++-....-.+.+..|. ..|....+.+++..+. ...+|+++.|
T Consensus 405 a~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 405 AQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 99999999999999888888888888886 4555555555555444 4455665544
No 92
>PRK09669 putative symporter YagG; Provisional
Probab=99.91 E-value=2.4e-23 Score=208.28 Aligned_cols=330 Identities=14% Similarity=0.102 Sum_probs=221.6
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCc-ceeeehhhHHHHHHHHHhhcccc------hhh
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGC-RNVTICGAILGSACLAVSVFAKN------VIT 78 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~-r~~~~~g~~~~~~~~~l~~~~~~------~~~ 78 (461)
+.+.+.+++|++.+++|.++++..+...+..|+.|.+.|| +|| |+.++.+.+..+++.++....++ ++.
T Consensus 32 l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~ 111 (444)
T PRK09669 32 LAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIY 111 (444)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3555677799999999999999999999999999999999 666 56677788888888766555543 234
Q ss_pred HHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHH-------hhchhHHHHHHH
Q psy15069 79 LCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-------EYGWKITLLVLS 149 (461)
Q Consensus 79 l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-------~~gw~~~f~i~~ 149 (461)
+++. .++.+.+..+..++-.++..++. +++|.+..++...+..+|..+++.+...+.. ..||+..+.+.+
T Consensus 112 ~~~~-~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 112 ACVT-YILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHH-HHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 4443 35556666666666677888877 4889988888887777777776654444332 357898888888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCC
Q psy15069 150 VTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKAT 229 (461)
Q Consensus 150 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (461)
+++++..+..++..++++.+++ +
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~~--~------------------------------------------------------- 213 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPEV--D------------------------------------------------------- 213 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCCC--c-------------------------------------------------------
Confidence 8877766554443322211110 0
Q ss_pred CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHH
Q psy15069 230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIV 309 (461)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 309 (461)
+ +.+.++..+ ..+|||.++.+++..++............+.|.+..--+++..+.+....
T Consensus 214 ------~---------~~~~~~~~~-----~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 273 (444)
T PRK09669 214 ------N---------SSSVWKDLK-----LLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTG 273 (444)
T ss_pred ------C---------CCCHHHHHH-----HHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHH
Confidence 0 000112222 35789988887777666555554333333333333222334444555566
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH-HHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC--
Q psy15069 310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA-ATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-- 385 (461)
Q Consensus 310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-- 385 (461)
.+..+++.++++++.||+++++.... +.+...+ ...+... .++.+.+++..++.|++.+...+..++++.|..+
T Consensus 274 ~i~~ii~~~~~~~l~~r~gk~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~ 351 (444)
T PRK09669 274 MIAGLFGALLSERLLGKFDRVRAFKW--TIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE 351 (444)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHH--HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 67888899999999999766555443 2322222 1111112 3456667777788999999999999999998874
Q ss_pred -----ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 386 -----LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 386 -----~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
++..|..+|..+++..+|..+||.+.|.+.|..|
T Consensus 352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3445677899999999999999999999998765
No 93
>KOG2615|consensus
Probab=99.91 E-value=3.9e-23 Score=189.48 Aligned_cols=339 Identities=15% Similarity=0.155 Sum_probs=226.1
Q ss_pred ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHH
Q psy15069 23 GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSV 102 (461)
Q Consensus 23 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~ 102 (461)
.-.|.+.|.+.+...++++..|.+.||||||+++++|++..++++.+.++++|+..+++ -|++.|+..|-..+ ..+++
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~-aR~l~Gi~kgnl~v-~rAii 145 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVL-ARFLGGIFKGNLSV-IRAII 145 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhccCchHH-HHHHH
Confidence 45789999999999999999999999999999999999999999999999999955554 49999999997554 44778
Q ss_pred Hhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH---hhchhHHHHHHHH--HHHHHH-HH-HhhcccCCCCCCCCcc
Q psy15069 103 TCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR---EYGWKITLLVLSV--TVLSAV-LF-GILLRPLEEQPVEEPV 174 (461)
Q Consensus 103 ~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~---~~gw~~~f~i~~~--~~l~~~-i~-~~~~~~~~~~~~~~~~ 174 (461)
+|.+ +|+|+++++.....+++|.++||.+++++.+ ..|- ++|..-.. +.+... +. ..++.|++ .|. +++
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~-~p~alP~~~v~i~a~~~v~~~~~~lpET-L~~-rk~ 222 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGS-YPFALPCLLVFILAAGDVTFFPWFLPET-LPL-RKR 222 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhcc-CchHHHHHHHHHHHHHHHHHHHHhCCcc-ccc-hhh
Confidence 8888 7999999999999999999999999999987 2332 22222111 111111 11 11223332 221 111
Q ss_pred cCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHh
Q psy15069 175 EDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLR 254 (461)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (461)
+ |.+.+.++.+++ +.+ ..+.+
T Consensus 223 ~------------~~~~~~~~~~~~---------------------~~~----------------------~~~~~---- 243 (451)
T KOG2615|consen 223 N------------DEHSTLQEAADD---------------------RLA----------------------LLKFA---- 243 (451)
T ss_pred c------------ccccchhhhhhh---------------------hhh----------------------hcchh----
Confidence 1 001111111100 000 00000
Q ss_pred hhhccccccchhH------HH-HHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069 255 EMLDMELLRDPIF------IL-FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR 326 (461)
Q Consensus 255 ~~~~~~~l~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 326 (461)
.......+||++. +. +.+-+++....+..+....+.+. +.+|+++.|.|.+++..++...+.+....+..||
T Consensus 244 ~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~ 323 (451)
T KOG2615|consen 244 RIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPR 323 (451)
T ss_pred hhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccc
Confidence 0001112233221 11 22222322332223333333333 6789999999999999999999999999999998
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh
Q psy15069 327 PCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV 406 (461)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 406 (461)
..-.-+-.....+..+.-.+++.........+++...+..+..+...+....++.+..|.++||+..|+....+.++-++
T Consensus 324 ~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRai 403 (451)
T KOG2615|consen 324 YKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAI 403 (451)
T ss_pred cccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHh
Confidence 43122323333344444444455566677788888889999888888888999999999999999999999999999999
Q ss_pred ccceeeeeecccCCchHHH
Q psy15069 407 GPPIAGFLYDSTLSYSPAF 425 (461)
Q Consensus 407 gp~i~g~l~~~~g~~~~~f 425 (461)
||.+.|.+..+...-+..+
T Consensus 404 GPlv~g~i~~Ws~~~~~a~ 422 (451)
T KOG2615|consen 404 GPLVSGVIFSWSQGAQPAY 422 (451)
T ss_pred hhhhhheeEEEecCCCcee
Confidence 9999999987653333333
No 94
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.90 E-value=1.6e-27 Score=239.27 Aligned_cols=380 Identities=18% Similarity=0.251 Sum_probs=235.1
Q ss_pred cHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc---chhhHHHHhhccccccccccchhHHH
Q psy15069 24 VTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK---NVITLCITIGFGTGLGFGLIYLPAIV 100 (461)
Q Consensus 24 ~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~---~~~~l~i~~~~l~G~g~~~~~~~~~~ 100 (461)
+.+++.+...++..++++++|.+.||+|||+.+..+.++..++.++.++++ |++.+++. |++.|++.|...+....
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIG-RFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 578999999999999999999999999999999999999999999999999 99999985 99999999999999999
Q ss_pred HHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHh---hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccC
Q psy15069 101 SVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE---YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVED 176 (461)
Q Consensus 101 ~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~---~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 176 (461)
++.|.. +|+|++...+.+.+..+|.+++..+...+.+. .+||..+.+..+.++...+... +. ||+|++--.+.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~-~~--pESP~wL~~~~ 202 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRF-FL--PESPRWLLSKG 202 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cc--ccccceecccc
Confidence 999988 58899999999999999988887776655332 3599999888887766544432 33 44555411110
Q ss_pred CCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhh
Q psy15069 177 GALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREM 256 (461)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (461)
+ ++|.++..+. .... +..++|.+++....++.++.+....+.
T Consensus 203 ~------------~~~A~~~l~~------------------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (451)
T PF00083_consen 203 R------------DEEAEKVLRK------------------LRGK--------EIEDEEIEEIKAEKKESQESKASWRDL 244 (451)
T ss_pred c------------cccccccccc------------------cccc--------ccccccccccccccccccccceeeeec
Confidence 0 0000000000 0000 000000000000000000000112211
Q ss_pred hccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHH
Q psy15069 257 LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYN 336 (461)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~ 336 (461)
+..+..+.+.+....+..+....+.+....+.+.+.++.+.+.. -.......+...++.++..++.||+|||+..+
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i-- 320 (451)
T PF00083_consen 245 FRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLI-- 320 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccc--
Confidence 11111122222223333333334445556667777788887766 22233455667778888889999987665544
Q ss_pred HHHHHHHHHHHHhh----h-hhh----HHHHHHHHHHHhhhhh-hHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh
Q psy15069 337 GCLAICGAATVICA----F-CYN----YVELAIYAGVFGAMIG-AYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV 406 (461)
Q Consensus 337 ~~~~~~~~~~~~~~----~-~~~----~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 406 (461)
.+....+++.+.+. . .++ ....+....++..+.+ ...+..+.+..|.+|++.|+++.|+......+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i 400 (451)
T PF00083_consen 321 IGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFI 400 (451)
T ss_pred cccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccc
Confidence 33333333333221 1 111 1122222222222222 345666678899999999999999999999999999
Q ss_pred ccceeeeeecccCCchHHHHHHhHHHHHHHH-HHHHHHHhhHhHh
Q psy15069 407 GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV-MLFVIPSLQSYLL 450 (461)
Q Consensus 407 gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~-~~~~~~~~~~~~~ 450 (461)
+|.+...+.+..+ ....+.+.++++++..+ ..+++|+.+.+..
T Consensus 401 ~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 401 IPFLFPYLFNNLG-GWGVFLIFAGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred ccccccccccccc-ccccchhhHHHHHHHHhheeEEEeeCCCCCH
Confidence 9999999988765 23444454544444444 4445555554433
No 95
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.90 E-value=9.5e-22 Score=195.24 Aligned_cols=355 Identities=17% Similarity=0.158 Sum_probs=255.9
Q ss_pred HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeeh-hhHHHHHHHHHhhcc-cchhhHHHHhhccccccccccchhHHHHH
Q psy15069 25 TSWIASILVGVTLCSGPISSAFVNKYGCRNVTIC-GAILGSACLAVSVFA-KNVITLCITIGFGTGLGFGLIYLPAIVSV 102 (461)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~-g~~~~~~~~~l~~~~-~~~~~l~i~~~~l~G~g~~~~~~~~~~~~ 102 (461)
.+...++..+...+..|+.|.++|+-|+||-++. ..+++.++.++..+. ++.|.+...+-++.-++.....+.-.+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677888889999999999999999998776544 445555566666664 44444433332333345444445555566
Q ss_pred Hhhh-hccc--------------------------hhhhhhhccchhhhHHHHhHHHHHHHHh--------hchhHHHHH
Q psy15069 103 TCYF-ERLR--------------------------SLATGIAVCGSGLGTIIFAPIIDYTVRE--------YGWKITLLV 147 (461)
Q Consensus 103 ~~~f-~~~r--------------------------g~a~gi~~~~~~lg~~i~~~l~~~l~~~--------~gw~~~f~i 147 (461)
.+.. ++++ ++..+...+...+|+++...+.-.+... .+-|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 6665 4555 8999998888888888877766665432 235777888
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccccccc
Q psy15069 148 LSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSK 227 (461)
Q Consensus 148 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (461)
.|+--++..+...++.|+++.++..+...+ .+.
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~-----------------~~~------------------------------ 264 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSS-----------------YLR------------------------------ 264 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchh-----------------HHH------------------------------
Confidence 877766665555555554433210000000 000
Q ss_pred CCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHH
Q psy15069 228 ATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLI 306 (461)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~ 306 (461)
..-++.++.. ++.-|.|.....++++++..-+...+......|. +++|++..+...+.
T Consensus 265 ----------------~g~~~l~~t~-----k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~ 323 (477)
T PF11700_consen 265 ----------------FGFKRLWRTF-----KEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFG 323 (477)
T ss_pred ----------------HHHHHHHHHH-----HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHH
Confidence 0001111222 2346778888899999999999999999999999 68999999999999
Q ss_pred HHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--------hhhHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069 307 SIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--------CYNYVELAIYAGVFGAMIGAYVGLTSV 378 (461)
Q Consensus 307 ~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~g~~~~~~~~~~~~ 378 (461)
.+..+.+++|.+++|++.||+|.|++.++..++....+..+.-.+ .++.+.+++..++.|++.|..++..-+
T Consensus 324 l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs 403 (477)
T PF11700_consen 324 LVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRS 403 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 999999999999999999999888433333333333222222222 457788999999999999999999999
Q ss_pred HHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069 379 ILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS 447 (461)
Q Consensus 379 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~ 447 (461)
+..++.|+++.+..+|++.+.....+.+||.+.|.+.|.+|+.+..+....++.+++.++.+.++..+.
T Consensus 404 ~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 404 LFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 999999999999999999999999999999999999999999999999999998888888766654443
No 96
>KOG4686|consensus
Probab=99.90 E-value=9e-24 Score=185.69 Aligned_cols=365 Identities=17% Similarity=0.191 Sum_probs=248.7
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHHHHHhh---cccchhhHHHHhh
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSACLAVSV---FAKNVITLCITIG 84 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~~~l~~---~~~~~~~l~i~~~ 84 (461)
.+..++.+|.+++.++..+++|++.....+...+.|+++|| +|.|...++-+++..++-+..+ ..+.+|.+... |
T Consensus 65 alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~G-R 143 (459)
T KOG4686|consen 65 ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAG-R 143 (459)
T ss_pred hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhh-h
Confidence 34566777888899999999999999999999999999995 6777666666666666665543 34678888875 9
Q ss_pred ccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHH----HhHHHHHHHHhhc---hh--HHHH-HHHHHHH
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTII----FAPIIDYTVREYG---WK--ITLL-VLSVTVL 153 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i----~~~l~~~l~~~~g---w~--~~f~-i~~~~~l 153 (461)
|+.|+|.-...++-..+...||+ |+.+.++|+..+..-+|..+ .|++...+-..++ -. ...+ +.+..|.
T Consensus 144 F~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~ 223 (459)
T KOG4686|consen 144 FLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCK 223 (459)
T ss_pred eeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 99999988878888888999995 89999999988777777655 4444444333221 00 1111 1122222
Q ss_pred HHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCC
Q psy15069 154 SAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPES 233 (461)
Q Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (461)
...++.+..--.++ ..| +..|++. ++ ..
T Consensus 224 ~slical~lg~~D~-rAe-----------rilh~e~---------------------------------------g~-~G 251 (459)
T KOG4686|consen 224 QSLICALSLGLSDD-RAE-----------RILHLEE---------------------------------------GF-LG 251 (459)
T ss_pred HHHHHHHHhhhhhh-HHH-----------HHHhhhc---------------------------------------Cc-cc
Confidence 22333222111110 000 0000000 00 00
Q ss_pred CCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhh
Q psy15069 234 ESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAA 312 (461)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~ 312 (461)
++ .++.+ .. --.|.+|.+.+..++.+.+..-+.+.-|.+. +.+|+|+..++.+.+.....
T Consensus 252 e~---------------pkLtd---v~-~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~I 312 (459)
T KOG4686|consen 252 EE---------------PKLTD---VN-TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGI 312 (459)
T ss_pred CC---------------ccccc---cc-ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhh
Confidence 00 00110 01 1256799999999999988888888888888 78899999999999999999
Q ss_pred hhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069 313 NMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA 392 (461)
Q Consensus 313 ~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (461)
..+.++++|.++||.|++-.++...+. ....+-.. +.-+.+.-+..+.+.|+.....-...+..++.++|+++.|++
T Consensus 313 sav~spvfg~i~Dk~G~n~~wv~~a~~-~tl~~H~~--l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTa 389 (459)
T KOG4686|consen 313 SAVLSPVFGAISDKYGFNLWWVASACI-LTLLGHSG--LFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTA 389 (459)
T ss_pred hhhhhhhHHHhHhhhcceehhHHHHHH-HHHHHhhh--HHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcch
Confidence 999999999999998877666543222 21111111 122455556788899999888777788889999999999999
Q ss_pred HHHHHHHHHhhhhhccceeeeeecccCCchHH---HHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 393 FGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA---FFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 393 ~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~---f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
+|....++++|-++.|+++|.+.|..|+|.+. |+..+.+.+....+.+.+-++++.
T Consensus 390 ygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~g 448 (459)
T KOG4686|consen 390 YGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQSG 448 (459)
T ss_pred HHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheeccccC
Confidence 99999999999999999999999998877553 444444555555555554444433
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.90 E-value=6.6e-22 Score=192.80 Aligned_cols=353 Identities=14% Similarity=0.171 Sum_probs=247.0
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-cceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-CRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT 87 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~ 87 (461)
.++|.+.++.|.|..|+|.+.++..+...+++++.|.++||++ +|+++.+..++.++...+..+.++++.+++. -++.
T Consensus 23 p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~-~~l~ 101 (400)
T PF03825_consen 23 PYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVI-MLLF 101 (400)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHH
Confidence 3456667888999999999999999999999999999999986 5777878778888877777888888877764 3555
Q ss_pred cccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHH-HHHHHhhch---hHHHHHHHHHHHHHHHHHhhcc
Q psy15069 88 GLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPII-DYTVREYGW---KITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 88 G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~-~~l~~~~gw---~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
.+......+..-++..++. ++++.-.|-.-...++|.+++.... ..+....++ ...+++.++..++..... +..
T Consensus 102 ~~~~~p~~pl~dsi~~~~~-~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~l 179 (400)
T PF03825_consen 102 SFFFSPTMPLSDSIALSYL-GDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFL 179 (400)
T ss_pred HHHHccHHHHHHHHHHHHc-ccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhC
Confidence 5554444444444444433 3566777777777888877775542 223332333 234555554443333222 233
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
|+.+.+++++++ .+
T Consensus 180 p~~~~~~~~~~~------------------------------------------------------------~~------ 193 (400)
T PF03825_consen 180 PKTPPKRSAKES------------------------------------------------------------VK------ 193 (400)
T ss_pred CCCccccccCCC------------------------------------------------------------cc------
Confidence 443311100000 00
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhC-CCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRG-VTRSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
+....+. .+++|+|++....+..++.......+.++.+.|+++.| .+....+.++++..++.++.-...++
T Consensus 194 ---~~~~~~~-----~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~ 265 (400)
T PF03825_consen 194 ---KLLGLDA-----LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGR 265 (400)
T ss_pred ---cccchHH-----HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111 24799999999888888888888889999999999988 78888898899999999999999999
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHhhhh-hhHHHHHHH----HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069 323 ISDRPCVNRLYIYNGCLAICGAATVICAFC-YNYVELAIY----AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL 397 (461)
Q Consensus 323 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 397 (461)
+..|+|.+ .++.++++...+=..+.... ++.+..+.. ..++|+..+........++.+..|++.|+++.++++
T Consensus 266 ~~~r~g~~--~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~ 343 (400)
T PF03825_consen 266 FLKRFGIK--WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYS 343 (400)
T ss_pred HHHhcCHH--HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHH
Confidence 99996544 44556666667666666665 444443332 346999999999999999999999999999999988
Q ss_pred HH-HHhhhhhccceeeeeecccC-----CchHHHHHHhHHHHHHHHHHH
Q psy15069 398 LF-QGIASLVGPPIAGFLYDSTL-----SYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 398 ~~-~~~g~~~gp~i~g~l~~~~g-----~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.. .++|..+|..++|+++|+.| .|...+.+.+++.++..+++.
T Consensus 344 ~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 344 ALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 76 57999999999999999875 233455555555555444443
No 98
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.89 E-value=1.4e-21 Score=187.15 Aligned_cols=354 Identities=15% Similarity=0.127 Sum_probs=239.0
Q ss_pred hHHHHh-HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHH--HHH-HHhhcc----cchhhHHHH
Q psy15069 11 FIEFTK-VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGS--ACL-AVSVFA----KNVITLCIT 82 (461)
Q Consensus 11 ~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~--~~~-~l~~~~----~~~~~l~i~ 82 (461)
.|-+.+ +.|+|.+++|.++++..+...+.+|+.|.+.||+|.||-++....... .+. +...+. .|.+.-.+
T Consensus 30 ~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~i- 108 (412)
T PF01306_consen 30 FPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAI- 108 (412)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHH-
T ss_pred HHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 344455 489999999999999999999999999999999998776544332222 222 221221 23332222
Q ss_pred hhccccccccccchhHHHHHHhhh---hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q psy15069 83 IGFGTGLGFGLIYLPAIVSVTCYF---ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFG 159 (461)
Q Consensus 83 ~~~l~G~g~~~~~~~~~~~~~~~f---~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~ 159 (461)
+.|+..+..+.+...+...+. .|+.+.-.|=.-+..++|.+++..++|.+.+ .+-+..|++..+..++..++.
T Consensus 109 ---ig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll 184 (412)
T PF01306_consen 109 ---IGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLL 184 (412)
T ss_dssp ---HTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHH
Confidence 223444444544544443333 3556677777888999999999999999986 566777887766666555555
Q ss_pred hhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccc
Q psy15069 160 ILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDK 239 (461)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (461)
++.+|+.+.+.+ ..++ ++.++
T Consensus 185 ~~~~~~~~~~~~--~~~~--------------------------------------------------------~~~~~- 205 (412)
T PF01306_consen 185 LLLKPDVPPQAE--VADA--------------------------------------------------------LGAKK- 205 (412)
T ss_dssp HSS---SSSSS---SSTT--------------------------------------------------------SSS---
T ss_pred HHcCCcCchhhh--hhcc--------------------------------------------------------cccCC-
Confidence 555544321110 0000 00000
Q ss_pred cccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH----hCCCchhhHHHHHHHhhhhhh
Q psy15069 240 TTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ----RGVTRSNASSLISIVGAANMV 315 (461)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~s~~~~~~~~~~~~~~~~~ 315 (461)
.+.+.++. .+++|+|++|.+.+........+.++....|.|... .+.+....|.+.+...+..++
T Consensus 206 ---------~~~~~~~~--~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~ 274 (412)
T PF01306_consen 206 ---------DKVSLKDV--LSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEAL 274 (412)
T ss_dssp -------------HHHH--HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCcHHHH--HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHH
Confidence 00111111 247899999998887777777777776666766644 344556788899999999999
Q ss_pred hhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069 316 SRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395 (461)
Q Consensus 316 g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 395 (461)
...+..++.+|+|.|+. +.++..++.+=...+++.++.+.+.+.-.++|+-.........-++++.+|++..++.+.+
T Consensus 275 ~m~~~p~li~rig~k~~--Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v 352 (412)
T PF01306_consen 275 MMFFSPWLINRIGAKNL--LLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLV 352 (412)
T ss_dssp HHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHH
T ss_pred HHHHHHHHHHhcChHhH--HHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHH
Confidence 99999999999655544 4456667777788888999999999999999999998888889999999999988999988
Q ss_pred H-HHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 396 L-LLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 396 ~-~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
. +...++|.++.+.++|.++|+.| ++..|++.+.+.+...+...+.
T Consensus 353 ~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~ 399 (412)
T PF01306_consen 353 GFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFT 399 (412)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheee
Confidence 5 67788999999999999999996 8888888877766655554443
No 99
>KOG0254|consensus
Probab=99.89 E-value=1.9e-22 Score=205.06 Aligned_cols=377 Identities=16% Similarity=0.164 Sum_probs=245.2
Q ss_pred cHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHH
Q psy15069 24 VTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVT 103 (461)
Q Consensus 24 ~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~ 103 (461)
+.+++.++..++..++++++|++.|++|||+.++.+.+++.++.+++++++|+++++++ |+++|+|.|........+++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~G-R~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVG-RILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHHhccchhhhhhcchhhHh
Confidence 45899999999999999999999999999999999999999999999999999999986 99999999999999999999
Q ss_pred hhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHh--hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCC
Q psy15069 104 CYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALP 180 (461)
Q Consensus 104 ~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (461)
|..| +.||...++.+....+|.+++.. .+...++ ++||..+.+..+.+++..++ +++.|+ +|++.-++
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~-~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pe--sp~~L~~~----- 239 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYC-INYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPE--SPRWLIEK----- 239 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHH-HhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCC--ChHHHHHc-----
Confidence 9986 68999999999999999888844 4444443 48999988888888887777 666653 34421110
Q ss_pred cccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCC---Cccc---ccccccCCchhhhhHh
Q psy15069 181 HLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESE---STED---KTTCLNLSDDTKQTLR 254 (461)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~ 254 (461)
+..++.+...+. -++.+..+ |.++ +........+.+....
T Consensus 240 -------g~~~~a~~~l~~---------------------------l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (513)
T KOG0254|consen 240 -------GRLEEAKRSLKR---------------------------LRGLSPEDVEVELELLKIKLLVEAEVAEGKASWG 285 (513)
T ss_pred -------CChHHHHHHHHH---------------------------HhCCCCcchHHHHHHHHHHHHHhhhcccccccHH
Confidence 000000000000 00000000 0000 0000000000001122
Q ss_pred hhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH
Q psy15069 255 EMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI 334 (461)
Q Consensus 255 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~ 334 (461)
+... +..+++.++...+..+.+..++.....|.+.+++..|.+... .....+.++.++++..++..+.||+|||+.++
T Consensus 286 ~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 286 ELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLL 363 (513)
T ss_pred HhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 2222 345566667778888888888899999999999998887554 45555677778888888899999976555444
Q ss_pred HHHHHHHHHHHHHHhhhhh-------------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH
Q psy15069 335 YNGCLAICGAATVICAFCY-------------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG 401 (461)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 401 (461)
.+...+.++.+++.... ....+....+....+.....++.+.+..|.+|.+.|+++.++......
T Consensus 364 --~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~ 441 (513)
T KOG0254|consen 364 --FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNW 441 (513)
T ss_pred --HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHH
Confidence 44444444444333211 111222222233333334566777788999999999999999888887
Q ss_pred hhhhhccceeeeeecccCCchHHHHHHhHHHHHHHH--HHHHHHHhhHhH
Q psy15069 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV--MLFVIPSLQSYL 449 (461)
Q Consensus 402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~--~~~~~~~~~~~~ 449 (461)
+...+-....-.+.+..+ ....|...+..+.+... ..+++|+.+.+.
T Consensus 442 ~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 442 LWNFLISFFFPFITEALG-IGGTFGYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence 776555444333333322 23445454444444444 455556555443
No 100
>KOG0252|consensus
Probab=99.88 E-value=1.9e-22 Score=189.29 Aligned_cols=382 Identities=15% Similarity=0.100 Sum_probs=244.4
Q ss_pred CCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc------chhhHHHHhhccccccccc
Q psy15069 20 EGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK------NVITLCITIGFGTGLGFGL 93 (461)
Q Consensus 20 ~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~------~~~~l~i~~~~l~G~g~~~ 93 (461)
.++...+.+..+.+++..++|++.|++.||+|||+++...+++..++.++++++. +.-+.+.++|++.|+|.|.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 4566788999999999999999999999999999999999999999998877753 2223333479999999999
Q ss_pred cchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHh---------------hchhHHHHHHHHHHHHHHH
Q psy15069 94 IYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE---------------YGWKITLLVLSVTVLSAVL 157 (461)
Q Consensus 94 ~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~---------------~gw~~~f~i~~~~~l~~~i 157 (461)
-||.+.++.+|.. .++||...+...+..++|...+.++.-.+... +=||..|.+..+..+.+..
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly 240 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY 240 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 47899999999999888887777666655431 1288666555444444333
Q ss_pred HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069 158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE 237 (461)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (461)
..+. .|++++-+.. ++ +|..+..++ ..|+.+..-+++
T Consensus 241 ~Rl~-M~Et~~Y~al--------------~~--~~~~~a~~d--------------------------~~k~~~~~~~~~ 277 (538)
T KOG0252|consen 241 FRLK-MPETARYTAL--------------VS--KKLKQAAGD--------------------------MKKVLSVDIEAE 277 (538)
T ss_pred hhhc-CCcchhHHHH--------------hh--cCHhhhhhc--------------------------cccccccccchh
Confidence 2222 2222111100 00 000000000 000000000000
Q ss_pred cccccc-cCCchhhhhHhhhhcccccc--chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHH--------HH
Q psy15069 238 DKTTCL-NLSDDTKQTLREMLDMELLR--DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASS--------LI 306 (461)
Q Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~ 306 (461)
+..... ..+......+.+ ..++ -+.....+...|+.-.++|....+...+++..|+.+.+... ..
T Consensus 278 ~~~~~~~~~~~~~~~~F~~----~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~ 353 (538)
T KOG0252|consen 278 STAESDVPPPSNSFGLFSR----LFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGN 353 (538)
T ss_pred hccccCCCCcccccchHHH----HHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHH
Confidence 000000 000000011111 1111 13445566777888888899999999999888876655444 22
Q ss_pred HH-HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh-HH---HHHHH-HHHHhhhhhhHHHHHHHHH
Q psy15069 307 SI-VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN-YV---ELAIY-AGVFGAMIGAYVGLTSVIL 380 (461)
Q Consensus 307 ~~-~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~-~~l~g~~~~~~~~~~~~~~ 380 (461)
.+ ...+.+.|-++...++|++| |+++...+++++.+..+.+....+ .. ...+. .+.+-++..........+.
T Consensus 354 ~iia~~~~vPGyw~tv~~id~iG--Rk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivp 431 (538)
T KOG0252|consen 354 LIIAVCSTVPGYWFTVYFIDIIG--RKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVP 431 (538)
T ss_pred HHHHHHccCCceeEEEEEeehhh--hHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEee
Confidence 22 23345558888999999954 555555677777776666655433 11 11111 1111122222233344567
Q ss_pred HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec-----ccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHhh
Q psy15069 381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD-----STLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLLK 451 (461)
Q Consensus 381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~-----~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~ 451 (461)
+|.+|.+.|++..|+....+-+|+++|....+++.+ .. +.+.+|++.+.+.+++.+..+++++.+++...
T Consensus 432 aE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 432 AEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILFTLLIPETKGKSLE 506 (538)
T ss_pred hhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccc-cchHHHHHHHHHHHHhHheeEEeecccccCHH
Confidence 899999999999999999999999999999999998 54 48999999999999999998888865555433
No 101
>KOG0255|consensus
Probab=99.88 E-value=6.5e-22 Score=202.06 Aligned_cols=382 Identities=15% Similarity=0.116 Sum_probs=240.0
Q ss_pred HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069 15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI 94 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~ 94 (461)
.+.++.+.....+..+++.++..++.++.|.+.||+|||++++.+.++..++.++.++++|++.+++ +|++.|++.+..
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~-~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLI-FRFLSGFFGSGP 188 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHH-HHHHHHhhccch
Confidence 3567788899999999999999999999999999999999999999999999999999999999998 599999999999
Q ss_pred chhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCc
Q psy15069 95 YLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEP 173 (461)
Q Consensus 95 ~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~ 173 (461)
...+..++.|++ ||+|+.++.+ ......++.+++++++++.+ +||+.+++..+..++.++. +++. +|+|++..
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~--~Es~rwl~ 262 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLP--PESPRWLL 262 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHcc--CcChHHHH
Confidence 999999999999 7999999999 77777888899999999887 9999999999888877665 2332 23444322
Q ss_pred ccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhH
Q psy15069 174 VEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTL 253 (461)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (461)
.+.+..+.... .++..+. + .+.....++.++.. .. .+...+...
T Consensus 263 ~~g~~~~a~~~--------l~~~a~~-------------------------n-~~~~~~~~~~~~~~-~~-~~~~~~~~~ 306 (521)
T KOG0255|consen 263 SKGRIDEAIKI--------LKKIAKL-------------------------N-GRKLSVKELLRLEL-LL-RPLKLLFTE 306 (521)
T ss_pred HcCchHHHHHH--------HHHHHhh-------------------------c-CCCCCcHHHHHHHH-Hh-hHhhhhccC
Confidence 11110000000 0000000 0 00000000000000 00 000000000
Q ss_pred hhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhH
Q psy15069 254 REMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLY 333 (461)
Q Consensus 254 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 333 (461)
++.....+++.|++....+...+..+.+.....-++.....+|.+ ........+.....+....+...|+. +|+.
T Consensus 307 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~--gR~~ 381 (521)
T KOG0255|consen 307 PKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGN---IYLNFTLSGLVELPAYFRNGLLLPEF--GRRP 381 (521)
T ss_pred CCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCch---HHHHHHHHHHHHhhHHHHHHHHHHHh--CcHH
Confidence 111123455665433322222222222222222222223444433 33444455556677777778999995 4555
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHH---HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccce
Q psy15069 334 IYNGCLAICGAATVICAFCYNYV---ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPI 410 (461)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i 410 (461)
....+..+.+++++...+..... ...+...+..++.+..+........|++|+..|..+.+..+....++++++|.+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~ 461 (521)
T KOG0255|consen 382 PLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLF 461 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666677766666554322 344444555555666666668889999999999999999999999999999988
Q ss_pred eeeeecccCCchHHHHHHhHHHHHHHHHH-HHHHHhh
Q psy15069 411 AGFLYDSTLSYSPAFFLAGGAIFVSGVML-FVIPSLQ 446 (461)
Q Consensus 411 ~g~l~~~~g~~~~~f~~~~~~~l~~~~~~-~~~~~~~ 446 (461)
.-...... ....+...+.+..+..++. +++|+.+
T Consensus 462 ~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 462 PLLLRQMF--PLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHhhhc--ccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 64333321 2222222344444444443 5555544
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=3.5e-21 Score=194.03 Aligned_cols=336 Identities=13% Similarity=0.093 Sum_probs=225.3
Q ss_pred hHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCc-ceeeehhhHHHHHHHHHhhcccc------hhhH
Q psy15069 11 FIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGC-RNVTICGAILGSACLAVSVFAKN------VITL 79 (461)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~-r~~~~~g~~~~~~~~~l~~~~~~------~~~l 79 (461)
...+.+.+|++...+|.++.+.-+...+..|+.|.+.| |+|| |+.++.+.+..+++.+++...++ ++.+
T Consensus 30 ~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~ 109 (473)
T PRK10429 30 MYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFV 109 (473)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 44455667999999999999999999999999999999 5698 67788888888888766644332 2233
Q ss_pred HHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHHh-------hchhHHHHHHHH
Q psy15069 80 CITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE-------YGWKITLLVLSV 150 (461)
Q Consensus 80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~-------~gw~~~f~i~~~ 150 (461)
++. -++.+++..+..++-.++..+.. +++|.+..++...+.++|+++.+.+...+.+. .||+....+.++
T Consensus 110 ~~~-~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 110 CVT-YILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHH-HHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 333 25567777777777777888876 58899999987777777766665554433322 357777777777
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCC
Q psy15069 151 TVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATV 230 (461)
Q Consensus 151 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (461)
+.++..+...+..++++.+++++.
T Consensus 189 ~~~~~~~~~~~~~~e~~~~~~~~~-------------------------------------------------------- 212 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSSDNQVS-------------------------------------------------------- 212 (473)
T ss_pred HHHHHHHHHHcCceecCCcccccc--------------------------------------------------------
Confidence 666555444443332211110000
Q ss_pred CCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHh
Q psy15069 231 PESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVG 310 (461)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 310 (461)
++++ +.+.++..+ .+++||.++.+++..++.....+....+.+.|.+....+....+.+.+...
T Consensus 213 ---~~~~--------~~~~~~~~~-----~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~ 276 (473)
T PRK10429 213 ---AEGS--------HLTLKDIVA-----LIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAG 276 (473)
T ss_pred ---cccc--------CCCHHHHHH-----HHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHH
Confidence 0000 011122222 256898888888877777776666666666555544445666777777777
Q ss_pred hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH-HHHHHhh--hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC--
Q psy15069 311 AANMVSRVILGYISDRPCVNRLYIYNGCLAICG-AATVICA--FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-- 385 (461)
Q Consensus 311 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-- 385 (461)
++.+++.++.+++.||+|+++.......+.+.+ +..+... ..++.+.+++..++.|++.+...+..++++.|..+
T Consensus 277 i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~ 356 (473)
T PRK10429 277 AANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYG 356 (473)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 899999999999999987666554322221211 1111111 12345566667778889999888888899998855
Q ss_pred -----ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 386 -----LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 386 -----~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
.+..|..+|...+...++..+++.+.|++.+..|
T Consensus 357 e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 357 EYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred hHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4456668999999999999999999999987654
No 103
>KOG0253|consensus
Probab=99.87 E-value=5e-22 Score=181.00 Aligned_cols=407 Identities=14% Similarity=0.148 Sum_probs=250.4
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT 87 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~ 87 (461)
+.+.|...+..+.+..+.+++......++.+++.+.|.+.|++|||+......+..++...+.++++|+..+++ +|-+.
T Consensus 98 s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~-f~~l~ 176 (528)
T KOG0253|consen 98 SLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCV-FRALW 176 (528)
T ss_pred HHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhH-HHHHH
Confidence 45567778888999999999999999999999999999999999999999999999999999999999999998 58999
Q ss_pred cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCC
Q psy15069 88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLE 166 (461)
Q Consensus 88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~ 166 (461)
|+|.|. .|...++-.+.-| .+|..-+=.. ..+.+|.+....+.-..+.++||||.++..+....+...+ .++. +
T Consensus 177 ~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~--~ 251 (528)
T KOG0253|consen 177 GFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWV--Y 251 (528)
T ss_pred hccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-Hhhc--c
Confidence 999988 5555444444445 6777766555 8899999999888888899999999988887544333322 2233 3
Q ss_pred CCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCC
Q psy15069 167 EQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLS 246 (461)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (461)
++|+-.--+.++.+.-...++- ...++. ++..+..... .++..+++.++.. ++-.++.
T Consensus 252 ESpRf~~~~G~~~kAletL~ki-----ArmNg~----qlplgvl~~s-~~~~~e~e~~~~~------------~~~~~a~ 309 (528)
T KOG0253|consen 252 ESPRFYLAKGDDYKALETLHKI-----ARMNGK----QLPLGVLESS-AIDRQEQEESDLD------------DSKSSAA 309 (528)
T ss_pred cCcchhhhcCChHHHHHHHHHH-----HHhcCC----CCCcceeeee-hhhhhhhhhhchh------------hhhhccc
Confidence 4444100000000000000000 000000 0000000000 0000000000000 0000011
Q ss_pred chhhhhHhhhhccccccch-hHHHHHHHHHHHhhccccch--------------hhHhhHHHH-h--CCCchhhHHHHHH
Q psy15069 247 DDTKQTLREMLDMELLRDP-IFILFTISNIFTSIGFNVPY--------------VYIVKLAEQ-R--GVTRSNASSLISI 308 (461)
Q Consensus 247 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-~--g~s~~~~~~~~~~ 308 (461)
++.+.....+..+.+.|.. ..|.++.+..+.+.+...+. -..|.+++. . -.+...--.=..+
T Consensus 310 ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdlli 389 (528)
T KOG0253|consen 310 KEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLI 389 (528)
T ss_pred cccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHH
Confidence 1222233333332222221 12333333333332221111 123333322 0 1222222233446
Q ss_pred HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc
Q psy15069 309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR 388 (461)
Q Consensus 309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 388 (461)
..+..+.|.++.+++.||+|||+. +..+++++++++++...+.+.-...++.+..-++..+.+...+.+..|.+|++.
T Consensus 390 tslaefPGlLIt~~iverlGRKkT--Mal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKT--MALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence 678899999999999999776655 446777778777776666665556666677777777778888999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069 389 LTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQS 447 (461)
Q Consensus 389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~ 447 (461)
|+++.|....+..+|+++.|.++ ...+. +-..+..+.+.+++++.+...++|...|
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 99999999999999999999998 33333 3445555666677777666656655443
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.87 E-value=3.4e-21 Score=193.00 Aligned_cols=362 Identities=9% Similarity=-0.036 Sum_probs=236.6
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-----cceeeehhhHHH-HHHHHHhhcccchhhHHHHh
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-----CRNVTICGAILG-SACLAVSVFAKNVITLCITI 83 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~g~~~~-~~~~~l~~~~~~~~~l~i~~ 83 (461)
..|.+.+++|++.++++...++..+...+ .++.|++.||++ ||+.++++.++. +++....+..++.....+..
T Consensus 48 ~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 126 (468)
T TIGR00788 48 LSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAF 126 (468)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 45556667999999999999999999977 666999999998 777788888777 35555555556655555434
Q ss_pred hccccccccccchhHHHHHHhhhhccchhhhhhhccc---hhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCG---SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~---~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
.++.+++.+...+++-.+..+..++++....+..... .++|.++++.+++.+.+.+|||..|++.+++.++..+...
T Consensus 127 ~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~ 206 (468)
T TIGR00788 127 IFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSN 206 (468)
T ss_pred HHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 6888999999888888888888874444433333333 4589999999999999999999999999888877744333
Q ss_pred hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069 161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240 (461)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (461)
++ ++++.....+.++. ...+. . .....
T Consensus 207 ~~-~E~~~~~~~~~~~~--~~~~~--------------~---------------------------------~~~~~--- 233 (468)
T TIGR00788 207 LS-KERRAFVRPRIGTY--LEMNM--------------A---------------------------------LLTLG--- 233 (468)
T ss_pred hc-cccccccccccccc--chhhh--------------h---------------------------------hhhhh---
Confidence 33 33210000000000 00000 0 00000
Q ss_pred ccccCCchhhhhHhhhhccccccchhHHHHHHHHHH-Hhhccccch-hhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhh
Q psy15069 241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIF-TSIGFNVPY-VYIVKLAEQRGVTRSNASSLISIVGAANMVSRV 318 (461)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~ 318 (461)
..+..+....+. .+.+++|.++...+..++ ......... .++ ...+..|.++.+.|.+....+++.+++..
T Consensus 234 ----~~~~~~~~~~~l--~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~ 306 (468)
T TIGR00788 234 ----VLANVKVQILGL--RGAIQLLEIAKPLIFIFLSYANLPGASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVG 306 (468)
T ss_pred ----HHHHHHHHHHHH--HHHHhcHHHHHHHHHHHHHHhhcCCCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHH
Confidence 000011111111 124677887765554444 222211111 111 11256899999999999999999999999
Q ss_pred hhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh----------hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc
Q psy15069 319 ILGYISDRPCVNRLYIYNGCLAICGAATVICAF----------CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR 388 (461)
Q Consensus 319 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 388 (461)
+.+++.+|++.+ .++.++.++.+++.+.... .++.+......++.+++.+..+.....++.+..|++.
T Consensus 307 ~~~~~~~~~~~r--~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~ 384 (468)
T TIGR00788 307 GYDRFLKTFPYR--LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC 384 (468)
T ss_pred HHHHHHhhCCHH--HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc
Confidence 999999886544 3344455554444322211 1233344455677888888878888899999999999
Q ss_pred hhHHHHHHHHHHHhhhhhccceeeeeecccC----CchHHHHHHhHHHHH
Q psy15069 389 LTNAFGLLLLFQGIASLVGPPIAGFLYDSTL----SYSPAFFLAGGAIFV 434 (461)
Q Consensus 389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g----~~~~~f~~~~~~~l~ 434 (461)
.|+.+++.+...++|..+++.++|.+.+..| +|+..+....+..+.
T Consensus 385 egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~ 434 (468)
T TIGR00788 385 ESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLA 434 (468)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHH
Confidence 9999999999999999999999999998765 355555444444333
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.87 E-value=8e-21 Score=190.39 Aligned_cols=329 Identities=12% Similarity=0.077 Sum_probs=207.4
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc----Ccce-eeehhhHHHHHHHHHh-hcc----cc--hh
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY----GCRN-VTICGAILGSACLAVS-VFA----KN--VI 77 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~----G~r~-~~~~g~~~~~~~~~l~-~~~----~~--~~ 77 (461)
+.+++++.+|++..++|.+.++..+...+..|+.|.++||. |||+ .+..+.+...+..++. ... ++ .+
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 45666777899999999999999999999999999999997 6555 4456655555444432 221 11 12
Q ss_pred hHHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchh-----hhHHHHhHHHHHHHHh--hchhHHHHHH
Q psy15069 78 TLCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSG-----LGTIIFAPIIDYTVRE--YGWKITLLVL 148 (461)
Q Consensus 78 ~l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~-----lg~~i~~~l~~~l~~~--~gw~~~f~i~ 148 (461)
.+++. -++.+++.++..++..++..+.. +++|.+..++.+.+.+ ++..++|.+....... .+|.....+.
T Consensus 111 ~~~~~-~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~ 189 (448)
T PRK09848 111 YAYLT-YMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVL 189 (448)
T ss_pred HHHHH-HHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 22322 25667777777777666656544 4778888777665433 4444555554432110 1122111233
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccC
Q psy15069 149 SVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKA 228 (461)
Q Consensus 149 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (461)
++++++..+......+++ ++++ .
T Consensus 190 ~v~~~~~~~~~~~~~~e~--~~~~-~------------------------------------------------------ 212 (448)
T PRK09848 190 AIAGMVLYFICFKSTREN--VVRI-V------------------------------------------------------ 212 (448)
T ss_pred HHHHHHHHHHHHcCcEec--cCCC-c------------------------------------------------------
Confidence 333332222222221211 1000 0
Q ss_pred CCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHH
Q psy15069 229 TVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLIS 307 (461)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~ 307 (461)
+ +...+...+ .++|||.++...+..++...+........|.|+ +..|.++...++...
T Consensus 213 ------~----------~~~~~~~~~-----~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 271 (448)
T PRK09848 213 ------A----------QPSLKISLQ-----TLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLV 271 (448)
T ss_pred ------c----------CCCHHHHHH-----HHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHH
Confidence 0 000112222 368999998888888888777777777777777 456776655555455
Q ss_pred HHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069 308 IVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG 385 (461)
Q Consensus 308 ~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 385 (461)
...++.+++.++.+++.||++.++... .+.++..++.+.+.+. .+.+..++..++.|++.+...+...++..|..|
T Consensus 272 ~~~~~~~~~~~l~~~l~~r~g~~~~~~--~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~ 349 (448)
T PRK09848 272 QNLVGTVASAPLVPGMVARIGKKNTFL--IGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVE 349 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 556778889999999999976555444 3444444444333333 355666666778899999888888888888876
Q ss_pred cc-------chhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 386 LD-------RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 386 ~~-------~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
.+ +.|...|+.++...+|..+|+.+.|.+.+..|
T Consensus 350 ~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 350 YGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred hhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 43 46899999999999999999999998887654
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.87 E-value=1.2e-20 Score=178.96 Aligned_cols=276 Identities=14% Similarity=0.109 Sum_probs=203.7
Q ss_pred cccchhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHh------------
Q psy15069 72 FAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE------------ 138 (461)
Q Consensus 72 ~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~------------ 138 (461)
..++++.+++.+ ++.|.|.+..-+..+.++.+.. +|++.+.+++.++.+++|.+++|.+++.++..
T Consensus 6 ~~~~~~~~l~~~-f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 6 SQRYYVLFLGAL-FVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HhhHHHHHHHHH-HHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 446788888875 8999999999999999999887 57899999999999999999999999998842
Q ss_pred ----hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCC
Q psy15069 139 ----YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGP 214 (461)
Q Consensus 139 ----~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (461)
..|+++|++++++.++..+...+. +.++.+++++++
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~-~~p~~~~~~~~~--------------------------------------- 124 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFL-PLPELQEADVAR--------------------------------------- 124 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCCCcccccc---------------------------------------
Confidence 479999998887766655544333 322211100000
Q ss_pred cccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH
Q psy15069 215 TEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ 294 (461)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (461)
.+++ + .. + .++.+|+|.+++..+..++..........|.+.|+++
T Consensus 125 ------------------~~~~-~-------~~---~------~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~ 169 (310)
T TIGR01272 125 ------------------VSSG-D-------TT---Q------KTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSD 169 (310)
T ss_pred ------------------cccc-c-------cc---c------hhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 0 00 0 0134678888888888888777888999999999954
Q ss_pred ---hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhh
Q psy15069 295 ---RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGA 371 (461)
Q Consensus 295 ---~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 371 (461)
.|+++.+.+...+.+..+.++|+++.+++.||++.+|... .+..+..+..++....++... ....++.|++.+.
T Consensus 170 ~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~--~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~ 246 (310)
T TIGR01272 170 PHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA--FNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSI 246 (310)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH--HHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHH
Confidence 5999999999999999999999999999999987555433 344444444433333333333 3456688999999
Q ss_pred HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069 372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG 429 (461)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~ 429 (461)
.+|...+...+..| ++.+++.++. ....+|++++|++.|.+.|..| .+..+++..
T Consensus 247 i~P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~~a~~v~~ 301 (310)
T TIGR01272 247 MFPTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQLAFALPV 301 (310)
T ss_pred HHHHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-chHHHHHHH
Confidence 99999998888887 4457777775 5677999999999999999875 777776433
No 107
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.86 E-value=1.6e-20 Score=185.27 Aligned_cols=368 Identities=11% Similarity=0.071 Sum_probs=252.4
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCcceeeeh-hhHHHHHHHHHhhcccchhhH-----
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGCRNVTIC-GAILGSACLAVSVFAKNVITL----- 79 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~r~~~~~-g~~~~~~~~~l~~~~~~~~~l----- 79 (461)
+.+++.+++|.++..++++..+..+...+.+|+.|.+.| |+|||+.++. +.+...++.++.+++++++.+
T Consensus 26 ~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~ 105 (477)
T TIGR01301 26 LLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNL 105 (477)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccc
Confidence 456678899999999999999999999999999999999 5999999776 477777777788887765321
Q ss_pred ------------HHHhhccccccccccchhHHHHHHhhhh-ccc--hhhhhhhccchhhhHHHHhHHHHHH--HHhh---
Q psy15069 80 ------------CITIGFGTGLGFGLIYLPAIVSVTCYFE-RLR--SLATGIAVCGSGLGTIIFAPIIDYT--VREY--- 139 (461)
Q Consensus 80 ------------~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~r--g~a~gi~~~~~~lg~~i~~~l~~~l--~~~~--- 139 (461)
++.+ .+..++.....++..+++.|.+| ++| +.++++.....++|.++++.+++.. .+.+
T Consensus 106 ~~~~~~~~i~~~~i~~-~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~ 184 (477)
T TIGR01301 106 DKKTKPRAIIVFVVGF-WILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFT 184 (477)
T ss_pred cccchhHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccc
Confidence 1111 23334666677788889999985 433 6899999999999999999998865 2211
Q ss_pred ----------chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCc
Q psy15069 140 ----------GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTA 209 (461)
Q Consensus 140 ----------gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (461)
+.|..|++.+++.++..+...+..++++.+++++..++ + .
T Consensus 185 ~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~----~----------~---------------- 234 (477)
T TIGR01301 185 KTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS----E----------A---------------- 234 (477)
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh----h----------c----------------
Confidence 67888998888777777666665554332221000000 0 0
Q ss_pred CCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhcccccc-chhHHHHHHHHHHHhhccccchhhH
Q psy15069 210 ISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLR-DPIFILFTISNIFTSIGFNVPYVYI 288 (461)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (461)
+ ++++. +.+..+++... .+.+ -|.++.+++..++..++...+..|.
T Consensus 235 -----------~-----------~~~~~----------~~~~~~~~i~~-~~~~mP~~m~~l~~vqffsW~a~f~~~~y~ 281 (477)
T TIGR01301 235 -----------A-----------PPSKH----------GEEAFFGELFG-AFKYLPRPVWILLLVTCLNWIAWFPFILFD 281 (477)
T ss_pred -----------c-----------ccccc----------chhhhHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 00000 00011111111 1111 2467889999999999999999999
Q ss_pred hhHH-HH-hCCCch------h----hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh--
Q psy15069 289 VKLA-EQ-RGVTRS------N----ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN-- 354 (461)
Q Consensus 289 ~~~~-~~-~g~s~~------~----~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 354 (461)
.+++ ++ ++-++. + ..+....+.+...+.+++..++.+|+|.+ +.+...+.++.+++++...+.++
T Consensus 282 T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~-k~~~~~s~~~~~~~l~~~~~i~~~~ 360 (477)
T TIGR01301 282 TDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG-KRLWGIVNIILAICLAATVLVTYVA 360 (477)
T ss_pred cHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9988 32 332211 1 23344456666667777888888887632 33334555555555555544332
Q ss_pred -------------------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc--cchhHHHHHHHHHHHhhhhhccceeee
Q psy15069 355 -------------------YVELAIYAGVFGAMIGAYVGLTSVILVDLLGL--DRLTNAFGLLLLFQGIASLVGPPIAGF 413 (461)
Q Consensus 355 -------------------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~gp~i~g~ 413 (461)
.+..++.+.+.|+.++..+...++++++..++ ++.|..+|+.|.+..+.+++.....|.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~ 440 (477)
T TIGR01301 361 KNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGP 440 (477)
T ss_pred hccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 36677788899999999999999999999984 566999999999999999999988888
Q ss_pred eecccC-CchHHHHHHhHHHHHHHHHHHHH
Q psy15069 414 LYDSTL-SYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 414 l~~~~g-~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+.+..| +....+.+.++..++++++.+.+
T Consensus 441 ~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~ 470 (477)
T TIGR01301 441 WDQLFGGGNLPAFVVGAVAAFVSGLLALIL 470 (477)
T ss_pred HHHHcCCCCeeHHHHHHHHHHHHHHHHHHh
Confidence 666665 35567777888888877776544
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.86 E-value=8.5e-21 Score=188.99 Aligned_cols=331 Identities=17% Similarity=0.186 Sum_probs=248.6
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCc-ceeeehhhHHHHHHHHHhhcc-c-------ch
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGC-RNVTICGAILGSACLAVSVFA-K-------NV 76 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~-r~~~~~g~~~~~~~~~l~~~~-~-------~~ 76 (461)
+.+.+.+.+|+++..+|++..+.-+...+..|+.|.+.| |+|| |+.++.|.++.+++.+++... + ..
T Consensus 24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~ 103 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKL 103 (428)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence 355566667999999999999999999999999999999 8996 555778889999999887766 3 12
Q ss_pred hhHHHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHHhh-------chhHHHHH
Q psy15069 77 ITLCITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------GWKITLLV 147 (461)
Q Consensus 77 ~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------gw~~~f~i 147 (461)
..+.+.+ ++..++......+-.++..+.. +++|.+..+..+.+..+|.++...+...+.+.. ||++...+
T Consensus 104 ~~~~~~~-~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 104 VWLFVFY-ILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHH-HHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2334433 5568888888888888888877 378999999998888888876666665555322 69999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccccccc
Q psy15069 148 LSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSK 227 (461)
Q Consensus 148 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (461)
.+++.++..+...+..++++.+.+++++
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~---------------------------------------------------- 210 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQEK---------------------------------------------------- 210 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccccc----------------------------------------------------
Confidence 9888887776666654431111100000
Q ss_pred CCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH-hCCCchhhHHHH
Q psy15069 228 ATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ-RGVTRSNASSLI 306 (461)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~~~~~ 306 (461)
+.+.++.. +.++|||.++.+.+..++...+........+.|.+. .|.+ ...+...
T Consensus 211 ------------------~~~~~~~~-----~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~ 266 (428)
T PF13347_consen 211 ------------------KISLRDSL-----RSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFM 266 (428)
T ss_pred ------------------ccccccch-----hhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHH
Confidence 00011112 246889999999999999888888888888888754 4544 6777888
Q ss_pred HHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc
Q psy15069 307 SIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLL 384 (461)
Q Consensus 307 ~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 384 (461)
....++.+++.++.++++||+|+++... .+..+.+++.++..+.+ +.+..++..++.|++.+..+...+++++|..
T Consensus 267 ~~~~~~~~v~~~~~~~l~~r~gk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~i 344 (428)
T PF13347_consen 267 LIFFVASIVGSPLWGRLSKRFGKKKVYI--IGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVI 344 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHccceeehh--hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccch
Confidence 8889999999999999999987776544 44445555555545544 8888889999999999999999999998887
Q ss_pred C-------ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 385 G-------LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 385 ~-------~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
+ +++.|..+|..++...++..+++.+.|.+.+..|
T Consensus 345 d~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 345 DYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 6 3456889999999999999999999998887654
No 109
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.86 E-value=8.9e-21 Score=189.66 Aligned_cols=376 Identities=15% Similarity=0.099 Sum_probs=240.0
Q ss_pred eeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccc
Q psy15069 8 GILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGT 87 (461)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~ 87 (461)
+...+.+..|+|-+ ....|+.+...+...++.|+.|+|.|.+|||.+++.+.++..+|.++++-++|...++.. ..+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag-~~l~ 141 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAG-MVLY 141 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHH-HHHH
Confidence 34467888889875 667778888999999999999999999999999999999999999999999999999986 6899
Q ss_pred cccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh-cccC
Q psy15069 88 GLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL-LRPL 165 (461)
Q Consensus 88 G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~-~~~~ 165 (461)
|+|.|..... ...+.|..| |+|....++.....-....++|.++..+...-+|||.|++..+...+..++.++ ++|+
T Consensus 142 GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 142 GVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998766543 445788775 888877776665555555567777777666679999999998877666555443 4443
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccc------------c-ccC-CCCCcCCCCCcccCCccccccccCCCC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVS------------T-SIW-QPSTAISTGPTEVISTQAQIDSKATVP 231 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (461)
+ .++.+.++.. ..+ .-.|.+.+---. + +.+ +.+++... .+-.+.-
T Consensus 221 ~-~~~~~~~~~s--~~~------~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~-VIa~lvi----------- 279 (599)
T PF06609_consen 221 P-RAQLHGRKLS--KRE------QLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAH-VIAPLVI----------- 279 (599)
T ss_pred c-hhhhccccCc--HHH------HHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcc-chhhHHH-----------
Confidence 2 2111111000 000 000000000000 0 000 00000000 0000000
Q ss_pred CCCCcccccccc--cCCchhh-hhHhhhhccccccc-hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCc---hhhH
Q psy15069 232 ESESTEDKTTCL--NLSDDTK-QTLREMLDMELLRD-PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTR---SNAS 303 (461)
Q Consensus 232 ~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~---~~~~ 303 (461)
. ..+. -.-.+.. ...+.+++.+++|+ |.+...++..++....++....+.|... .-++-++ ...+
T Consensus 280 ------G-~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~ 352 (599)
T PF06609_consen 280 ------G-FVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIG 352 (599)
T ss_pred ------H-HHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceee
Confidence 0 0000 0000000 11234566678888 4566666677777777777777777766 3445444 3567
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHH
Q psy15069 304 SLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILV 381 (461)
Q Consensus 304 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 381 (461)
+.....+++..+|..+.|.+..+++ +-|+.+.++.+++.+.+-++.. .++....+...++.|++.|.........++
T Consensus 353 ~~s~~~~fg~~~g~~i~g~l~~~ir-~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~q 431 (599)
T PF06609_consen 353 WISSPVGFGSCAGAVILGLLFSKIR-HIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQ 431 (599)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHcc-chhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeE
Confidence 7778888899999999999998764 3444444444444433222222 234445566778888888887777777777
Q ss_pred HhcCccchhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069 382 DLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY 415 (461)
Q Consensus 382 ~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~ 415 (461)
-..|+++.+++.|+..++..+|+.+|..+...+.
T Consensus 432 l~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 432 LIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred eeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 7789999999999999999999999887765443
No 110
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.84 E-value=3.4e-19 Score=176.74 Aligned_cols=398 Identities=14% Similarity=0.077 Sum_probs=226.8
Q ss_pred eeeeeehHHH-HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-CcceeeehhhHHHHHHHHHhhccc-chhhHHH
Q psy15069 5 YSFGILFIEF-TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-GCRNVTICGAILGSACLAVSVFAK-NVITLCI 81 (461)
Q Consensus 5 ~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~g~~~~~~~~~l~~~~~-~~~~l~i 81 (461)
|.+..++|.+ .+++|.++.+.+.+.+.+.....++.+++|++.||+ |||+++..|.++..++.+++++.. +...+++
T Consensus 26 Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l 105 (493)
T PRK15462 26 YGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYL 105 (493)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 3344455655 556899999999999999999999999999999999 999999999999999987776543 2222333
Q ss_pred HhhccccccccccchhHHHHHHhhhhc---cchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q psy15069 82 TIGFGTGLGFGLIYLPAIVSVTCYFER---LRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLF 158 (461)
Q Consensus 82 ~~~~l~G~g~~~~~~~~~~~~~~~f~~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~ 158 (461)
. -.+.++|.|...+...+++.+.+|+ +|..+.++.+++.++|+.++|.+.+.+.+.+||++.|.+.++..++..+.
T Consensus 106 ~-l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 106 S-LAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred H-HHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHH
Confidence 2 1334466666666667788999853 68999999999999999999999999999999999999876654444333
Q ss_pred HhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccc
Q psy15069 159 GILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTED 238 (461)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (461)
.++.++..+....++++ +.+ + ++.......... . ..-. . .-.. ...-.+
T Consensus 185 ~~~~~~~l~~~~~~~~~----~~~-----~-~~~~~~~~~~~~-~-----------~~~~---~-~~~~-----~~~~~~ 233 (493)
T PRK15462 185 FLCGNRHFTHTRGVNKK----VLR-----A-TNFLLPNWGWLL-V-----------LLVA---T-PALI-----TVLFWK 233 (493)
T ss_pred HHHhhhhhccCCCCCCC----Cch-----h-hhHHHHHHHHHH-H-----------HHHH---H-HHHH-----HHHHHH
Confidence 33322221110000000 000 0 000000000000 0 0000 0 0000 000000
Q ss_pred ccccccCC-chhhhh--Hhhhhccc---cccch--hHHHHHHHHHHHhhccccchhhHhhHHHH------hCCCchhhHH
Q psy15069 239 KTTCLNLS-DDTKQT--LREMLDME---LLRDP--IFILFTISNIFTSIGFNVPYVYIVKLAEQ------RGVTRSNASS 304 (461)
Q Consensus 239 ~~~~~~~~-~~~~~~--~~~~~~~~---~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~s~~~~~~ 304 (461)
+....... ...-.. ...+...+ .-|+| .+..+.+...+....+.-..+-+..|.++ .|++ -..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~ 312 (493)
T PRK15462 234 EWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAM 312 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHH
Confidence 00000000 000000 00000000 01222 12222232223333332223333344432 1222 23556
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCcc-h---h-HHHHHHHHHHHHHHHHhhhh---------hhHHHHHHHHHHHhhhhh
Q psy15069 305 LISIVGAANMVSRVILGYISDRPCVN-R---L-YIYNGCLAICGAATVICAFC---------YNYVELAIYAGVFGAMIG 370 (461)
Q Consensus 305 ~~~~~~~~~~~g~~~~g~l~dr~~~~-~---~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~g~~~~ 370 (461)
..++..+..++..++.+++=.|..++ | . .=+..++++.+++++.+.+. .+.++++...++++++.-
T Consensus 313 ~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl 392 (493)
T PRK15462 313 FQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL 392 (493)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 77888888887887777664332111 1 1 11345666666665554321 256778888889999999
Q ss_pred hHHHHHHHHHHHhcCccchhHHHHHHHHHH-Hhhhhhccceeeeeecc-----------cCCchHHHHHHhHHHHHH
Q psy15069 371 AYVGLTSVILVDLLGLDRLTNAFGLLLLFQ-GIASLVGPPIAGFLYDS-----------TLSYSPAFFLAGGAIFVS 435 (461)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~g~~~gp~i~g~l~~~-----------~g~~~~~f~~~~~~~l~~ 435 (461)
...|+..+.++++.|++.+|..+|...... .+|..++..+.+...+. ..+|...|...+...++.
T Consensus 393 ~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 393 FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987643 56666665555544211 113667888888776655
No 111
>PRK11462 putative transporter; Provisional
Probab=99.84 E-value=6.1e-19 Score=176.62 Aligned_cols=329 Identities=12% Similarity=0.149 Sum_probs=211.5
Q ss_pred hHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCcc-eeeehhhHHHHHHHHHhhcccc------hhhH
Q psy15069 11 FIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGCR-NVTICGAILGSACLAVSVFAKN------VITL 79 (461)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~r-~~~~~g~~~~~~~~~l~~~~~~------~~~l 79 (461)
...+.+.+|++...+|.++.+.-+.-.+.-|+.|.++|| +||| +.++.|.+..+++.+++-..++ +..+
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~ 112 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYA 112 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 344566689999999999999999999999999999995 6875 5567787888888877655543 2233
Q ss_pred HHHhhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHHhh-------chhHHHHHHHH
Q psy15069 80 CITIGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------GWKITLLVLSV 150 (461)
Q Consensus 80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------gw~~~f~i~~~ 150 (461)
++.+ ++..++..+...+-.++..+.. +++|.+.+++...+..+|..+++.+...+.+.. ||+....+.++
T Consensus 113 ~~~~-~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 113 AITY-TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHH-HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 3333 4557777777777777777766 589999999999999988888777766555443 57877777777
Q ss_pred HHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCC
Q psy15069 151 TVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATV 230 (461)
Q Consensus 151 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (461)
+.++..+...+..+++ ++++++
T Consensus 192 i~~i~~~i~~~~~kE~--~~~~~~-------------------------------------------------------- 213 (460)
T PRK11462 192 VAFMMLAFCFFTTKER--VEAPPT-------------------------------------------------------- 213 (460)
T ss_pred HHHHHHHHHHhcceec--cCCCcc--------------------------------------------------------
Confidence 7666554444332221 110000
Q ss_pred CCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHh
Q psy15069 231 PESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVG 310 (461)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~ 310 (461)
+.+.++..+ ..++||.++.+....++..............|.+...-+....+.+.....
T Consensus 214 ---------------~~~~~~~l~-----~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~ 273 (460)
T PRK11462 214 ---------------TTSMREDLR-----DIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYC 273 (460)
T ss_pred ---------------CCCHHHHHH-----HHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHH
Confidence 000112222 357888877766665555555444333333333322223344556677788
Q ss_pred hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC----
Q psy15069 311 AANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF-CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG---- 385 (461)
Q Consensus 311 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---- 385 (461)
++.+++.+++++++||+++|+........ .......+... ..+.+..++..++.|++.+...++.++++.|..+
T Consensus 274 i~~iig~~l~~~l~~r~gkk~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~ 352 (460)
T PRK11462 274 VGNLIGSALAKPLTDWKCKVTIFWWTNAL-LAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEW 352 (460)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHH-HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 88999999999999997655443322211 11111111111 1223334455566788777777777777777755
Q ss_pred ---ccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 386 ---LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 386 ---~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
.+..|..++.......+|..+|+.+.|.+.+..|
T Consensus 353 ~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 353 CNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444555677778888999999999988887643
No 112
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.83 E-value=3.2e-19 Score=167.28 Aligned_cols=350 Identities=17% Similarity=0.135 Sum_probs=254.2
Q ss_pred ccHHHHHHHHHHhhhhhhHhhHhhhhhcCccee-eehhhHHHHHHHHHhhcccc--hhhHHHHhhccccccccccchhHH
Q psy15069 23 GVTSWIASILVGVTLCSGPISSAFVNKYGCRNV-TICGAILGSACLAVSVFAKN--VITLCITIGFGTGLGFGLIYLPAI 99 (461)
Q Consensus 23 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~-~~~g~~~~~~~~~l~~~~~~--~~~l~i~~~~l~G~g~~~~~~~~~ 99 (461)
+..+...++..+...+.+|+-|.++|+.|+||- +....++..++.++..++++ .+.+.+.+-++..++.....+.-.
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 457788888888889999999999999997665 55556666666667777765 666655555777888887777788
Q ss_pred HHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHH------------------HhhchhHHHHHHHHHHHHHHHHHh
Q psy15069 100 VSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTV------------------REYGWKITLLVLSVTVLSAVLFGI 160 (461)
Q Consensus 100 ~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~------------------~~~gw~~~f~i~~~~~l~~~i~~~ 160 (461)
+.+.+..+ ++.++..++......+|.++.-.+.-... +...-|.++.+.++-.++..+-.+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 88888874 66788888877777777666544432221 112456667766666665555444
Q ss_pred hcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccc
Q psy15069 161 LLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKT 240 (461)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (461)
+..++.+...+ .. . ..+. +
T Consensus 218 ~~v~~~~~~~~-~~-------~-----------~~l~------------------------------------~------ 236 (438)
T COG2270 218 LNVHDAEKISS-PP-------P-----------TALR------------------------------------N------ 236 (438)
T ss_pred hcccccccccc-cc-------h-----------HHHH------------------------------------H------
Confidence 44333221000 00 0 0000 0
Q ss_pred ccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069 241 TCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVI 319 (461)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~ 319 (461)
.-++.+.+++ +..+++.+...+++.++..-+..........|. .++|++..+..+.....++..++|.++
T Consensus 237 ----g~k~L~~t~k-----~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii 307 (438)
T COG2270 237 ----GFKELKSTFK-----EIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAII 307 (438)
T ss_pred ----HHHHHHHHHH-----HHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 0011122233 344556777888899988888888999999998 599999999999999999999999999
Q ss_pred hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH
Q psy15069 320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF 399 (461)
Q Consensus 320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 399 (461)
.|++.||++.|+..+. ++++..+..+...+......+++...+.|++.|..++..-++..+++|+++.++.+|++++.
T Consensus 308 ~g~Ld~rfg~k~vl~~--~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyalt 385 (438)
T COG2270 308 AGFLDERFGSKPVLMI--GLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALT 385 (438)
T ss_pred HHHHHHHhCCceeehH--HHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhh
Confidence 9999999887765543 34444433333334455556677788999999999999999999999999999999999999
Q ss_pred HHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 400 QGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 400 ~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
+...+.+||.+.+.+.+.+|+-+..+....++.+++.+.....+.
T Consensus 386 gra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~ 430 (438)
T COG2270 386 GRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKV 430 (438)
T ss_pred hhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecC
Confidence 999999999999999999999999888888888888776655443
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.3e-18 Score=166.64 Aligned_cols=330 Identities=18% Similarity=0.211 Sum_probs=241.6
Q ss_pred HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhh----cCc-ceeeehhhHHHHHHHHHhhcccc------hhhHHHH
Q psy15069 14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNK----YGC-RNVTICGAILGSACLAVSVFAKN------VITLCIT 82 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~G~-r~~~~~g~~~~~~~~~l~~~~~~------~~~l~i~ 82 (461)
+.+.+|++...+|.++.+.-+.-++.-|+.|.+.|| +|| |+.++.|.+-.++.+.++-.+++ ....+++
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vt 118 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVT 118 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHH
Confidence 455589999999999999999999999999999995 665 66688898999999988877763 3333444
Q ss_pred hhccccccccccchhHHHHHHhhh--hccchhhhhhhccchhhhHHHHhHHHHHHHH-------hhchhHHHHHHHHHHH
Q psy15069 83 IGFGTGLGFGLIYLPAIVSVTCYF--ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-------EYGWKITLLVLSVTVL 153 (461)
Q Consensus 83 ~~~l~G~g~~~~~~~~~~~~~~~f--~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-------~~gw~~~f~i~~~~~l 153 (461)
+ ++.+++...+..|-.++..+.. |+||.+..++-+.+.++|.++...+...+.. ..||+.+..+++++..
T Consensus 119 Y-~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 119 Y-MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred H-HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 4 7788888888888878777776 6899999999999988887766555555543 3489999999998888
Q ss_pred HHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCC
Q psy15069 154 SAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPES 233 (461)
Q Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (461)
+..+.+++-.+++..+. ++. +
T Consensus 198 i~~l~~~~~v~ER~~~~--~~~---------------------------------------------------------~ 218 (467)
T COG2211 198 ILLLFCFFNVKERVVET--QPT---------------------------------------------------------K 218 (467)
T ss_pred HHHHHHHHHhhcccCcc--ccC---------------------------------------------------------c
Confidence 87776666433322111 000 0
Q ss_pred CCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhh
Q psy15069 234 ESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAA 312 (461)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~ 312 (461)
++. +.+.+.... ..++||++..+++..++...+..........|. -..|.+..+..........+
T Consensus 219 ~~~---------~~~~~~~~~-----~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~ 284 (467)
T COG2211 219 TGV---------KLKLKDSFL-----LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAG 284 (467)
T ss_pred ccc---------cccHHHHHH-----HHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHH
Confidence 000 011111121 257899998888888887777766666666666 34577777777777788888
Q ss_pred hhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc------
Q psy15069 313 NMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSVILVDLL------ 384 (461)
Q Consensus 313 ~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~------ 384 (461)
.+++.++..++.+|+|+++.+.. +.++..++.....+. ++.+..++..++.+++.+...++.++++.|..
T Consensus 285 ~l~~~~~~p~L~~~~gkk~~~~~--~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~ 362 (467)
T COG2211 285 LLIGLILWPRLVKKFGKKKLFLI--GLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWK 362 (467)
T ss_pred HHHHHHhHHHHHHHhchHHHHHH--HHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHH
Confidence 88889999999999776665543 444444444444343 35667777778999999999999999988764
Q ss_pred -CccchhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 385 -GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 385 -~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
+.+.-|..++.+.++.-+|.+++..+.|++.+..|
T Consensus 363 TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 363 TGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45567888999999999999999999998887654
No 114
>KOG2563|consensus
Probab=99.74 E-value=8.1e-18 Score=158.58 Aligned_cols=371 Identities=15% Similarity=0.145 Sum_probs=251.3
Q ss_pred eeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccc-----hhh--
Q psy15069 6 SFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKN-----VIT-- 78 (461)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~-----~~~-- 78 (461)
.|+....+....+| +....-|..-++.+.+...++.+-++.||+|.|...+++.++.+++.++-..+.. ...
T Consensus 63 ~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~ 141 (480)
T KOG2563|consen 63 QYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRP 141 (480)
T ss_pred eehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhh
Confidence 34555555566678 7777788888899999999999999999999999999999999999988655532 222
Q ss_pred HHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhh------chhH--HHHHHH
Q psy15069 79 LCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY------GWKI--TLLVLS 149 (461)
Q Consensus 79 l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~------gw~~--~f~i~~ 149 (461)
++..-..+.+.+...+......+...|| |++|..|..+..++..+|..++..+...++.+- .|.. .|+..+
T Consensus 142 l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~ 221 (480)
T KOG2563|consen 142 LTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVE 221 (480)
T ss_pred hhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHH
Confidence 2222234555555555555556778899 699999999999999999999888888877643 3544 344445
Q ss_pred HHHHHHHHHHhhcccC-CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccC
Q psy15069 150 VTVLSAVLFGILLRPL-EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKA 228 (461)
Q Consensus 150 ~~~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (461)
+++.+.+++..+.++. |+.|.. .++.
T Consensus 222 ~l~~l~l~l~~~~~~~~P~tPps-------------------------------------------------~s~~---- 248 (480)
T KOG2563|consen 222 CLAALLLALVLFVFTKKPPTPPS-------------------------------------------------ASQA---- 248 (480)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCc-------------------------------------------------hhHh----
Confidence 5544444444444433 222220 0000
Q ss_pred CCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHH
Q psy15069 229 TVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISI 308 (461)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~ 308 (461)
.+. ..+..+..+ +.++|++|.++++.+......+++..+.+..-+...|++...+|.....
T Consensus 249 ------~~~--------~~~f~~si~-----~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l 309 (480)
T KOG2563|consen 249 ------ALQ--------DASFPKSIK-----SCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGAL 309 (480)
T ss_pred ------hhh--------cCcHHHHHH-----HHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHH
Confidence 000 011223333 4689999999999998888888888888776777778888899999999
Q ss_pred HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH-HHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc
Q psy15069 309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA-TVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLL 384 (461)
Q Consensus 309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 384 (461)
..+++++++.+.|.+.||.+ +-+....+......++ +.+.... ...+.++....++|++.....|+..-+..|..
T Consensus 310 ~iv~Gmlga~~~gii~Dktk-~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~T 388 (480)
T KOG2563|consen 310 MIVAGMLGALASGIIADKTK-KFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETT 388 (480)
T ss_pred HHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeec
Confidence 99999999999999999942 2222222333333333 2111111 24456667778899998888898887777877
Q ss_pred CccchhHHHHHHHHHHHhhhhhccceeeeeecccC----CchHHHHHHhHHHHHHHHHHHHHHHhhHhHh
Q psy15069 385 GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL----SYSPAFFLAGGAIFVSGVMLFVIPSLQSYLL 450 (461)
Q Consensus 385 ~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g----~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~ 450 (461)
-|..-++..|+.+..+++.+.+-.++.+...+..+ .+..-+.+...+.+...+..++.+..+|++.
T Consensus 389 yPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~ 458 (480)
T KOG2563|consen 389 YPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRA 458 (480)
T ss_pred cccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhh
Confidence 66777899999999999999999999888887655 2323333333333444444444444444333
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.72 E-value=3.6e-15 Score=140.65 Aligned_cols=353 Identities=15% Similarity=0.102 Sum_probs=248.0
Q ss_pred HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-----ccee-eehhhHHHHHHHHHhhcc-----c-------c
Q psy15069 14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-----CRNV-TICGAILGSACLAVSVFA-----K-------N 75 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----~r~~-~~~g~~~~~~~~~l~~~~-----~-------~ 75 (461)
|..|++++..-++...++..+... ..+..|...|+.+ ||.- +..|..+.+.+..+..++ . +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 678899999999999999998886 6999999999999 6655 555666666555444332 2 2
Q ss_pred hh--hHHHH-hhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHH
Q psy15069 76 VI--TLCIT-IGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVT 151 (461)
Q Consensus 76 ~~--~l~i~-~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~ 151 (461)
.| ....+ .-.+.|+|.+..-++..+++.|.. ||+|+++.++..+..-+|.+++..+.+.+.+.|.-.-...+....
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 22 11111 125789999988888889999988 689999999999999999999999999999887654444444444
Q ss_pred HHHHHHHHhh--cccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCC
Q psy15069 152 VLSAVLFGIL--LRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKAT 229 (461)
Q Consensus 152 ~l~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (461)
.++..++..+ +..+++.++..+.
T Consensus 165 a~i~~~l~~ia~wg~E~r~~~~~~~------------------------------------------------------- 189 (403)
T PF03209_consen 165 ALIALLLNLIALWGQEPRRSRRAAA------------------------------------------------------- 189 (403)
T ss_pred HHHHHHHHHHHHHhcccCCcccccC-------------------------------------------------------
Confidence 4433333322 2222211110000
Q ss_pred CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHH
Q psy15069 230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISI 308 (461)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~ 308 (461)
.+++ ..+.+..+. ++..+|+...+.+..++...++..-...+-+|- +.+|++..+...+...
T Consensus 190 ---~~~~---------~~~f~~a~~-----~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~ 252 (403)
T PF03209_consen 190 ---AERP---------RPPFREAWR-----QVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAF 252 (403)
T ss_pred ---CCCC---------CccHHHHHH-----HHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHH
Confidence 0000 011223333 234666666666666666667666667777787 7889999999999999
Q ss_pred HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHH---hhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069 309 VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVI---CAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG 385 (461)
Q Consensus 309 ~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 385 (461)
...+.++|-.+.|++..|. .+++.....++....+++.+ .....+.+.+....+++|++.|......-+...++.+
T Consensus 253 ~~~G~L~G~~~~g~~l~~~-~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~ 331 (403)
T PF03209_consen 253 WGGGTLLGMLLAGFLLSRR-LGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTS 331 (403)
T ss_pred HHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCC
Confidence 9999999999999998852 22322333444444444333 3345578888899999999999998888899999999
Q ss_pred ccchhHHHHHHHHHHHhhhhhccceeeeeeccc----C-----CchHHHHHHhHHHHHHHHHHH
Q psy15069 386 LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST----L-----SYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 386 ~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~----g-----~~~~~f~~~~~~~l~~~~~~~ 440 (461)
+++.|..+|.....+.++..+|..++|.+.|.. + .|..+|.+-+++.+++..+..
T Consensus 332 ~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 332 AGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998742 2 266677776666666655443
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.70 E-value=1.2e-14 Score=139.81 Aligned_cols=404 Identities=14% Similarity=0.061 Sum_probs=247.8
Q ss_pred eehHHHHhHhc----CCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-CcceeeehhhHHHHHHHHHhhccc--chhhHHH
Q psy15069 9 ILFIEFTKVFQ----EGDGVTSWIASILVGVTLCSGPISSAFVNKY-GCRNVTICGAILGSACLAVSVFAK--NVITLCI 81 (461)
Q Consensus 9 ~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~g~~~~~~~~~l~~~~~--~~~~l~i 81 (461)
++.-++..+++ .++++..-+++.|.........++|+++||+ |+|+.+.+|.++..+|.++.+.++ +...+++
T Consensus 43 iL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i 122 (498)
T COG3104 43 ILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYI 122 (498)
T ss_pred HHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHH
Confidence 34555666666 9999999999999887778999999999995 899999999999999999999884 6778887
Q ss_pred HhhccccccccccchhHHHHHHhhhh---ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q psy15069 82 TIGFGTGLGFGLIYLPAIVSVTCYFE---RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLF 158 (461)
Q Consensus 82 ~~~~l~G~g~~~~~~~~~~~~~~~f~---~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~ 158 (461)
.. ++.++|.|..-+...+++.+.+| .+|....++.+++.++|+++.|.+.+++.+++||...|-+.++-+....+.
T Consensus 123 ~L-~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~ 201 (498)
T COG3104 123 GL-ALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI 201 (498)
T ss_pred HH-HHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 64 67779999999999999999873 357889999999999999999999999999999999999888877776665
Q ss_pred HhhcccC-CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcc-c----cccc---cCC
Q psy15069 159 GILLRPL-EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQ-A----QIDS---KAT 229 (461)
Q Consensus 159 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~---~~~ 229 (461)
.++.++. ...+..++.+. ...+... .+....=......... ...+.+..... . .... .+.
T Consensus 202 f~~~~r~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~---------~~l~~~~~~~~~~~~~i~~~~~~~~~~ 270 (498)
T COG3104 202 FLLGRRHVKGIGGVPDPNP-LSFNFLL-PVLGGLVVMILAALLT---------LLLNQNTFSGVLLVISILIAIIYFAEA 270 (498)
T ss_pred HHHccchhcCCCCCCCccc-hhhhhhh-hhHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554321 11111000000 0000000 0000000000000000 00000000000 0 0000 000
Q ss_pred CCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhcc----ccchhhHhhHH-HH-hCCCchhhH
Q psy15069 230 VPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGF----NVPYVYIVKLA-EQ-RGVTRSNAS 303 (461)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~-~g~s~~~~~ 303 (461)
-+ +++ ..+.|++ -..+..+++...+....+ ..+..+..... .+ +|++ -..+
T Consensus 271 ~~-~~~----------~~~er~r-----------~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~ 327 (498)
T COG3104 271 FR-SPK----------VFDERRR-----------LLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPA 327 (498)
T ss_pred hc-cCc----------cHHHHHH-----------HHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHH
Confidence 00 000 0000111 111222333333222222 22222222222 22 2322 2345
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCcch-----hHHHHHHHHHHHHHHHHhhhh----------hhHHHHHHHHHHHhhh
Q psy15069 304 SLISIVGAANMVSRVILGYISDRPCVNR-----LYIYNGCLAICGAATVICAFC----------YNYVELAIYAGVFGAM 368 (461)
Q Consensus 304 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~-----~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~g~~ 368 (461)
+..+...+.-++.+++..++..|.++++ ..=+.+++.+++.+++++... .+.++++...++.+++
T Consensus 328 ~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~g 407 (498)
T COG3104 328 WFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFG 407 (498)
T ss_pred HHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 6677777777777777766666533221 122345555556555544433 2578888888999999
Q ss_pred hhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee------eecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 369 IGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF------LYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~------l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
.=+..|...++++++.|+.-.+..++........|..++..+++. .++.. .+...|+.++.+.++..+..+..
T Consensus 408 EL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 408 ELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred HHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999888888888888877774 22332 46778888888887777665555
Q ss_pred HHhhHh
Q psy15069 443 PSLQSY 448 (461)
Q Consensus 443 ~~~~~~ 448 (461)
.+..+|
T Consensus 487 ~~~~~r 492 (498)
T COG3104 487 SPKLNR 492 (498)
T ss_pred hHHHHH
Confidence 444333
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.67 E-value=5.7e-18 Score=170.67 Aligned_cols=360 Identities=16% Similarity=0.187 Sum_probs=3.0
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc--------------
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK-------------- 74 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~-------------- 74 (461)
.....+.++|+++.+++|++.+.+-++..+..++..++.+|.+|-+++.+|.++.+++.+++++.+
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~ 103 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNS 103 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccc
Confidence 557789999999999999999999999999999999999999999999999999999998876521
Q ss_pred ------------------------------------chhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhh
Q psy15069 75 ------------------------------------NVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIA 117 (461)
Q Consensus 75 ------------------------------------~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~ 117 (461)
-++.++++ .++.|+|....++.+.++++|.. +|+-+...|+.
T Consensus 104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g-q~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 104 NGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILG-QLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred ccccccccccccccccccccCccccccccccccchHHHHHHHHH-HHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 02333443 68999999999999999999999 57788899999
Q ss_pred ccchhhhHHHHhHHHHHHHHhh---------------------c-hhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCccc
Q psy15069 118 VCGSGLGTIIFAPIIDYTVREY---------------------G-WKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVE 175 (461)
Q Consensus 118 ~~~~~lg~~i~~~l~~~l~~~~---------------------g-w~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 175 (461)
++...+|+++|-.+++.+.+.| | |...|++.|++.++..+..+.+.+..|..++ .++
T Consensus 183 ~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~-~~~ 261 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSE-RQE 261 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccc-ccc
Confidence 9999999999988888776421 2 6667777777777665554444221111110 000
Q ss_pred CCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhh
Q psy15069 176 DGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLRE 255 (461)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (461)
+++.++. . .++ .+... .+++++ .+..+...++
T Consensus 262 ~~~~~~~----------------~---------------------~~~---~~~~~-~~~~~~-------~~~~~~~~~d 293 (539)
T PF03137_consen 262 EKESSER----------------K---------------------EED---SDKDS-FKDPKS-------KKSFGKSIKD 293 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhhc----------------c---------------------hhh---hhhhc-cccccc-------ccchhhhhhh
Confidence 0000000 0 000 00000 000000 0000011111
Q ss_pred h--hccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcch
Q psy15069 256 M--LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNR 331 (461)
Q Consensus 256 ~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~ 331 (461)
. .-+++++||.|....++..+......++.+++|.|+ .++++++++++++.....+ +.++|.+++|++..|++.+.
T Consensus 294 f~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~ 373 (539)
T PF03137_consen 294 FPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSA 373 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcH
Confidence 1 114689999999999999999999999999999999 7899999999998876555 57789999999999975544
Q ss_pred hHHHHHHHHHHHHHHHH-----hhhhh---------hH----------------------------------------HH
Q psy15069 332 LYIYNGCLAICGAATVI-----CAFCY---------NY----------------------------------------VE 357 (461)
Q Consensus 332 ~~~~~~~~~~~~~~~~~-----~~~~~---------~~----------------------------------------~~ 357 (461)
+-....+++...+..+. +..++ .+ ..
T Consensus 374 ~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~ 453 (539)
T PF03137_consen 374 RGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIP 453 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHH
Confidence 43222222221111111 00010 00 11
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHH-hhhhhccceeeeeeccc
Q psy15069 358 LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQG-IASLVGPPIAGFLYDST 418 (461)
Q Consensus 358 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~gp~i~g~l~~~~ 418 (461)
+.+..++.-+..+........++.+.+|+++|+.+.|+..++.. +|.+-||++.|.+.|.+
T Consensus 454 Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 454 FLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 11222222233333333444456788999999999999887755 67788999999999964
No 118
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.67 E-value=2.1e-16 Score=148.19 Aligned_cols=180 Identities=17% Similarity=0.206 Sum_probs=162.7
Q ss_pred ccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069 262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI 341 (461)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~ 341 (461)
.|.+.++.+.+++...++..-.+....|.+.++.|+|.+|.|.+.+.+.+++.++..+.|.++|| .+++..+..++++
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr--~npr~fm~~gLil 103 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR--SNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc--CCCceeehHHHHH
Confidence 44556777888888888888899999999999999999999999999999999999999999999 5555556688899
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee--eeeecccC
Q psy15069 342 CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA--GFLYDSTL 419 (461)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~--g~l~~~~g 419 (461)
+++..+++++.++.+.+.++.++-|+++|.-.|.....+++++++++||+..++.|++.++|+.+.|++. +++.++.
T Consensus 104 sai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~- 182 (448)
T COG2271 104 SAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG- 182 (448)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 8888875
Q ss_pred CchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 420 SYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 420 ~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
+|+..|++.+++.++.++..+.+-+
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhC
Confidence 6999999999998888777666533
No 119
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.7e-15 Score=143.97 Aligned_cols=175 Identities=16% Similarity=0.251 Sum_probs=159.2
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
...+.+.++.|......+.....+|++.+|+++|..++|++.+.+.++..++.++...+.||+. ||.++...+.++.+
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~--Rr~lLl~~l~lFi~ 90 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLE--RRRLLLGLLALFIV 90 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--hHHHHHHHHHHHHH
Confidence 3567788889999999999999999999999999999999999999999999999999999954 44445566777788
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA 424 (461)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~ 424 (461)
+.++..+++|++.+.+.+++.|+..|..++....+..++.|+++|+++.++.+....++..+|.+++.++-|..| ||..
T Consensus 91 ~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-WR~~ 169 (394)
T COG2814 91 SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-WRAT 169 (394)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-HHHH
Confidence 888899999999999999999999999999999999999999999999999999999999999999999999986 9999
Q ss_pred HHHHhHHHHHHHHHHHHH
Q psy15069 425 FFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 425 f~~~~~~~l~~~~~~~~~ 442 (461)
|+..+.+.+++.+..+..
T Consensus 170 F~~ia~l~ll~~~~~~~~ 187 (394)
T COG2814 170 FLAIAVLALLALLLLWKL 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999988877665543
No 120
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.65 E-value=4e-15 Score=154.68 Aligned_cols=164 Identities=15% Similarity=0.139 Sum_probs=133.7
Q ss_pred ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069 282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY 361 (461)
Q Consensus 282 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (461)
..+...+|.+.+++|++..+.+++.+...++.+++.+++|+++||+|+|+.++ .++++.+++.++..++++++.+++.
T Consensus 184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~li--i~lil~~i~~ll~afa~s~~~llv~ 261 (742)
T TIGR01299 184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLL--ICLSVNGFFAFFSSFVQGYGFFLFC 261 (742)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 44556777777899999999999999999999999999999999987665544 4555566666667778889999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc------------CCchHHHHHHh
Q psy15069 362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST------------LSYSPAFFLAG 429 (461)
Q Consensus 362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~------------g~~~~~f~~~~ 429 (461)
+++.|++.+...+....++.|.+|+++|++.+++.+++..+|.++++.++..+.... .+|++.+++.+
T Consensus 262 R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~ 341 (742)
T TIGR01299 262 RLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA 341 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987665444321 25899988888
Q ss_pred HHHHHHHHHHHHHHHhhH
Q psy15069 430 GAIFVSGVMLFVIPSLQS 447 (461)
Q Consensus 430 ~~~l~~~~~~~~~~~~~~ 447 (461)
+..++..++.+++|+..+
T Consensus 342 lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 342 FPCVFAIGALTFMPESPR 359 (742)
T ss_pred HHHHHHHHHHHHcCCCHH
Confidence 777777666666655433
No 121
>KOG1330|consensus
Probab=99.65 E-value=2.3e-16 Score=149.29 Aligned_cols=183 Identities=14% Similarity=0.215 Sum_probs=165.2
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 343 (461)
+....++++...+.+...|.+-..++..-+.++++.+..|++.+.+.+..+++++++|+++|| .+|+.++.++..+..
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr--yNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR--YNRKRVIAVGIFIWT 109 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh--cCcceEEeeHHHHHH
Confidence 345566788888888888888887777778899999999999999999999999999999999 667777778899999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchH
Q psy15069 344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSP 423 (461)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~ 423 (461)
++.+...++..+|.+.+++.+.|+|.+...|+.+++++|.+|.++|++++++.++...+|+.+|-..++.+.+.+++|++
T Consensus 110 ~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 110 LAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 424 AFFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 424 ~f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
.|...+++.++..++.++..+.++|
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCccc
Confidence 9999999999888877666554444
No 122
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.64 E-value=2.8e-15 Score=149.58 Aligned_cols=173 Identities=14% Similarity=0.146 Sum_probs=146.6
Q ss_pred cchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069 263 RDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 342 (461)
|.+.++..++.+++.++..+.+..++|.+.+++|++..+.+++.+...++..+++++.|++.||+|+|+. +..+.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~--~~~~~~~~ 98 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYF--MGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchh--HHHHHHHH
Confidence 3344555667777777777778889999999999999999999999999999999999999999765543 44666777
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069 343 GAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS 422 (461)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~ 422 (461)
+++.++..+.++++.+.+..++.|++.+...+....++.+++|+++|++++|+.+...++|..++|.+.+++.+..| |+
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~ 177 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WR 177 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HH
Confidence 77777777888888888888899999988888888999999999999999999999999999999999999998875 99
Q ss_pred HHHHHHhHHHHHHHHH
Q psy15069 423 PAFFLAGGAIFVSGVM 438 (461)
Q Consensus 423 ~~f~~~~~~~l~~~~~ 438 (461)
+.|++.+++.++..+.
T Consensus 178 ~~f~~~~i~~~~~~~~ 193 (434)
T PRK11663 178 YGMMIAGIIAIVVGLF 193 (434)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888776655443
No 123
>KOG3626|consensus
Probab=99.63 E-value=1.6e-14 Score=145.85 Aligned_cols=269 Identities=16% Similarity=0.151 Sum_probs=197.5
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc---------------
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK--------------- 74 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~--------------- 74 (461)
.+..+-+.|+++..+.|++.+.+-++..+...+..+..-|.+|-+++-+|+++.+++.+++++.+
T Consensus 119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 35567788999999999999999999999999999999999999999999999999999987740
Q ss_pred ----------------------------------c--hhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhh
Q psy15069 75 ----------------------------------N--VITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIA 117 (461)
Q Consensus 75 ----------------------------------~--~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~ 117 (461)
+ +|.+++.--++.|+|....++.+.+++++.. +|+-....|+.
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~ 278 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGIL 278 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHH
Confidence 0 2323332357999999999999999999999 46778889999
Q ss_pred ccchhhhHHHHhHHHHHHHHhh-------------------chhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCC
Q psy15069 118 VCGSGLGTIIFAPIIDYTVREY-------------------GWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGA 178 (461)
Q Consensus 118 ~~~~~lg~~i~~~l~~~l~~~~-------------------gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (461)
.+...+|+++|-.+++++.+.| -|..-|++.|.+.++..+..+++....+.+. ++++.
T Consensus 279 ~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~--~~~~~- 355 (735)
T KOG3626|consen 279 YSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQ--KRKRA- 355 (735)
T ss_pred HHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcccc--ccchh-
Confidence 9999999999999999887632 2777788888888877766555522221111 10000
Q ss_pred CCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhh--
Q psy15069 179 LPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREM-- 256 (461)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 256 (461)
.+. +..++ ++++..+ ..+..+.+++.
T Consensus 356 ------------~~~-~~~k~--------------------------------~~~~~~~-------~~~~~~~ikdfp~ 383 (735)
T KOG3626|consen 356 ------------RDL-HVLKT--------------------------------ESGGAKS-------DKTFGKKIKDFPK 383 (735)
T ss_pred ------------hhh-ccccc--------------------------------ccccccC-------CcchhhhHHHHHH
Confidence 000 00000 0000000 00111112221
Q ss_pred hccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhh-hhhhhhhhhhccCCCCcchhH
Q psy15069 257 LDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAA-NMVSRVILGYISDRPCVNRLY 333 (461)
Q Consensus 257 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~-~~~g~~~~g~l~dr~~~~~~~ 333 (461)
.-+++++||.|....++..+....+.++.+|+|-|+ +++|.+++.+..+.....+. ..+|.+++|++..|+..+.+-
T Consensus 384 s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~ 462 (735)
T KOG3626|consen 384 SIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARG 462 (735)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHH
Confidence 124689999999999999999999999999999999 78999999999988766654 567889999999997655543
No 124
>PRK10054 putative transporter; Provisional
Probab=99.63 E-value=4.7e-15 Score=146.04 Aligned_cols=172 Identities=15% Similarity=0.188 Sum_probs=143.7
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG 343 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 343 (461)
+.++.+.+..++...+.+...+++|.++ +++|++..+.+++.+...++.++++++.|+++||+++|+... .+.+..+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~--~~~~~~~ 84 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYML--LAITAFA 84 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHH--HHHHHHH
Confidence 3477788888888999999999999998 678999999999999999999999999999999987655433 4555556
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchH
Q psy15069 344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSP 423 (461)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~ 423 (461)
+..+.+.+.++.+.+++..++.|.+.+...+....+..|.+|+++|+++.|+.+...++|.++||.+++.+.+ . +|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~ 162 (395)
T PRK10054 85 SGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINL 162 (395)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCc
Confidence 6666677788887777777777777777778888889999999999999999999999999999999999886 3 4999
Q ss_pred HHHHHhHHHHHHHHHHH
Q psy15069 424 AFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 424 ~f~~~~~~~l~~~~~~~ 440 (461)
.|++.+++.++..+...
T Consensus 163 ~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 163 PFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988887777655443
No 125
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.60 E-value=1.3e-14 Score=142.41 Aligned_cols=172 Identities=18% Similarity=0.244 Sum_probs=148.7
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
+.++.+.+..+............+|.+.+++|.+..+.+++.+...++..+++++.|++.||+|+|+. +..+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~--~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI--LLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH--HHHHHHHHHH
Confidence 45667777888888887888889999999999999999999999999999999999999999765544 4456667777
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA 424 (461)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~ 424 (461)
..++..+.++++.+++.+++.|++.+...+....++.+++|+++|+++.++......++..+||.+++++.+..+ |++.
T Consensus 81 ~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~ 159 (382)
T PRK10091 81 GNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYT 159 (382)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHH
Confidence 777888889999999999999999998888888889999999899999999999999999999999999998764 9999
Q ss_pred HHHHhHHHHHHHHHH
Q psy15069 425 FFLAGGAIFVSGVML 439 (461)
Q Consensus 425 f~~~~~~~l~~~~~~ 439 (461)
|++.+++.++..+..
T Consensus 160 f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 160 FLLIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888766665543
No 126
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.60 E-value=5.3e-15 Score=143.77 Aligned_cols=172 Identities=19% Similarity=0.223 Sum_probs=142.7
Q ss_pred HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV 347 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 347 (461)
+.+....++...+.......+|.|..+.+.+..+.+++.+...++.+++.++.|+++||+|+|+... .+.++.+++.+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~--~~~~~~~~~~~ 79 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMI--GADLIRAVLVA 79 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHH--HHHHHHHHHHH
Confidence 3456667777777777888889999889999999999999999999999999999999977655443 44444444444
Q ss_pred Hhhhhh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069 348 ICAFCY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS 422 (461)
Q Consensus 348 ~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~ 422 (461)
+..+.+ +.+.+++..++.|++.+...+...+++.|++|+++|+++.++.+....+|..+||.+++.+.+..| |+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~ 158 (365)
T TIGR00900 80 VLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IK 158 (365)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HH
Confidence 445555 888888999999999999999999999999999999999999999999999999999999998864 99
Q ss_pred HHHHHHhHHHHHHHHHHHHH
Q psy15069 423 PAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 423 ~~f~~~~~~~l~~~~~~~~~ 442 (461)
..|++.++..++..+..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 159 WAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99988877766665554444
No 127
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.59 E-value=1.3e-14 Score=143.35 Aligned_cols=177 Identities=19% Similarity=0.249 Sum_probs=146.8
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
+.+....+..+...+..+......|.+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+.++ .+.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~--~~~~~~~~ 89 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMV--TSIVLFSA 89 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH--HHHHHHHH
Confidence 3455677777777888888888888888999999999999999999999999999999999977655443 45566666
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC-CchH
Q psy15069 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL-SYSP 423 (461)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g-~~~~ 423 (461)
+.++..+.++++.+++..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ +|+.
T Consensus 90 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~ 169 (405)
T TIGR00891 90 GTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRA 169 (405)
T ss_pred HHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 666777788999999999999999999999999999999999999999999999999999999999999887654 4999
Q ss_pred HHHHHhHHHHHHHHHHHHHH
Q psy15069 424 AFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 424 ~f~~~~~~~l~~~~~~~~~~ 443 (461)
.|++.++..++..+.....+
T Consensus 170 ~f~~~~~~~~~~~~~~~~~~ 189 (405)
T TIGR00891 170 LFFISILPIIFALWLRKNIP 189 (405)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 99876655555444333333
No 128
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.59 E-value=4.9e-15 Score=149.02 Aligned_cols=179 Identities=13% Similarity=0.128 Sum_probs=147.5
Q ss_pred ccch-hHHHHHHHHHHHhhccccchhhHhhHHH-H--hCCCchhhHHHHHHHhhhhhhhhhhhhhccCC-CCcchhHHHH
Q psy15069 262 LRDP-IFILFTISNIFTSIGFNVPYVYIVKLAE-Q--RGVTRSNASSLISIVGAANMVSRVILGYISDR-PCVNRLYIYN 336 (461)
Q Consensus 262 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~ 336 (461)
+++| .++.+.+..++..++++....++|.|++ + +|++..+++.+.+.+.++..++++++|+++|| +|+|+..+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~-- 83 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV-- 83 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH--
Confidence 4454 4566777788888999999999999995 4 79999999999999999999999999999999 67666544
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc---hhHHHHHHHHHHHhhhhhccceeee
Q psy15069 337 GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR---LTNAFGLLLLFQGIASLVGPPIAGF 413 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~~~gp~i~g~ 413 (461)
.+.++.+++.+++.+.++.+.+++..++.|++.|...+...+++.+.+|+++ |++++++.+...++|..+||.++|+
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 5556666666666677777777778888999999888999999999998754 8889999999999999999999999
Q ss_pred eecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 414 LYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 414 l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
+.++.| |+..|.+.++..+++.+..+..+
T Consensus 164 l~~~~g-~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 164 IAENYG-YHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHhcC-hHHHHHHHHHHHHHHHHHHHHcc
Confidence 999875 99999998876666554444433
No 129
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.59 E-value=2e-14 Score=141.53 Aligned_cols=158 Identities=13% Similarity=0.182 Sum_probs=134.6
Q ss_pred HhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHH
Q psy15069 277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYV 356 (461)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (461)
.....+.....+|.+.+++|.++.+.++..+...++..+++++.|++.||+|+|+. +..+.++.++..+...+.++++
T Consensus 32 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~--~~~~~~~~~~~~~~~~~~~~~~ 109 (394)
T PRK10213 32 LIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV--VILFAVLLTLSCLLVSFANSFS 109 (394)
T ss_pred HHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH--HHHHHHHHHHHHHHHHHHChHH
Confidence 33344455567888889999999999999999999999999999999999765544 4456666666767777788999
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHH
Q psy15069 357 ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSG 436 (461)
Q Consensus 357 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~ 436 (461)
.+++.+++.|++.+...+....++.|++|+++|+++.++.....++|..+||.+++.+.+..| |++.|++.+++.++..
T Consensus 110 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 110 LLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999875 9999998876665544
Q ss_pred H
Q psy15069 437 V 437 (461)
Q Consensus 437 ~ 437 (461)
+
T Consensus 189 l 189 (394)
T PRK10213 189 F 189 (394)
T ss_pred H
Confidence 3
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.58 E-value=2.3e-14 Score=141.08 Aligned_cols=171 Identities=14% Similarity=0.226 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT 346 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 346 (461)
++.+.+..++.....+.....+|.+.+++|.++.+.++..+.+.++..+++++.|++.||+|+|+.. ..+..+.+++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~ 88 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL--IGLFVLFIASH 88 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHHHHHHH
Confidence 4455555444434444455567888899999999999999999999999999999999997765543 35566667777
Q ss_pred HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069 347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF 426 (461)
Q Consensus 347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~ 426 (461)
+...+.++++.+++.+++.|++.+...+...+++.+.+|+++|+++.|+......+|..+||++++.+.+.. +|++.|+
T Consensus 89 ~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~ 167 (390)
T PRK03545 89 VLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFL 167 (390)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHH
Confidence 777888999999999999999998888988999999999999999999999999999999999999998876 4999999
Q ss_pred HHhHHHHHHHHHHH
Q psy15069 427 LAGGAIFVSGVMLF 440 (461)
Q Consensus 427 ~~~~~~l~~~~~~~ 440 (461)
+.+++.++..+..+
T Consensus 168 ~~~~~~~l~~~~~~ 181 (390)
T PRK03545 168 AIGGGALITLLLLI 181 (390)
T ss_pred HHHHHHHHHHHHHH
Confidence 98887776655443
No 131
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.58 E-value=1.1e-14 Score=142.87 Aligned_cols=171 Identities=16% Similarity=0.193 Sum_probs=142.6
Q ss_pred HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV 347 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 347 (461)
+...+..++...+.......+|.+.+++|.+..+.+++.+...++..+++++.|++.||+|+|+... .+.++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~--~~~~~~~~~~~ 85 (385)
T TIGR00710 8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLL--LGLFIFALSSL 85 (385)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH--HHHHHHHHHHH
Confidence 3344444555566666777888888999999999999999999999999999999999987655443 45566666667
Q ss_pred HhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069 348 ICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL 427 (461)
Q Consensus 348 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~ 427 (461)
...+.++.+.+.+..++.|++.+...+....++.|.+|+++|+++.|+.+....+|..+||.+++.+.+.. +|+..|++
T Consensus 86 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~ 164 (385)
T TIGR00710 86 GLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAF 164 (385)
T ss_pred HHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHH
Confidence 77778888888999999999999999999999999999999999999999999999999999999999876 49999988
Q ss_pred HhHHHHHHHHHHHH
Q psy15069 428 AGGAIFVSGVMLFV 441 (461)
Q Consensus 428 ~~~~~l~~~~~~~~ 441 (461)
.+++.++..+..+.
T Consensus 165 ~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 165 LSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777766655444
No 132
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.58 E-value=1.2e-14 Score=143.90 Aligned_cols=173 Identities=14% Similarity=0.140 Sum_probs=146.5
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
+.++...+.+++.+.....+....|.+.+++|++..+.+++.+.+.++..+++++.|++.||+|+|+. +..++++.++
T Consensus 8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~--~~~~~~~~~~ 85 (412)
T TIGR02332 8 RLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW--IAGIMVLWGI 85 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH--HHHHHHHHHH
Confidence 34556677777778888888888887779999999999999999999999999999999999765554 4466777777
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc-----cC
Q psy15069 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS-----TL 419 (461)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~-----~g 419 (461)
..++..+.++++.+++.+++.|++.+...+....++.|++|+++|+++.|+.+....+|..++|.+++++.+. ..
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 165 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK 165 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 7777788889999999999999999999898888999999999999999999999999999999999988742 12
Q ss_pred CchHHHHHHhHHHHHHHHHH
Q psy15069 420 SYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 420 ~~~~~f~~~~~~~l~~~~~~ 439 (461)
+|++.|++.++..++..++.
T Consensus 166 gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 166 GWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred chhHHHHHHHHHHHHHHHHH
Confidence 59999999887776655443
No 133
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.58 E-value=8.9e-15 Score=141.53 Aligned_cols=165 Identities=22% Similarity=0.314 Sum_probs=138.8
Q ss_pred HHHHHHHhhccccchhhHh-hHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 271 TISNIFTSIGFNVPYVYIV-KLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
++..++...........+| .+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+ ++..+.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR--VLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH--HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee--eEeehhhhhhhHHHHh
Confidence 4555666677777778888 555889999999999999999999999999999999976555 4445555666653443
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069 350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG 429 (461)
Q Consensus 350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~ 429 (461)
.++++.+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+++.+.+..+ |+..|++.+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~ 158 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISA 158 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccccccccc
Confidence 3557777888899999999999999999999999999999999999999999999999999999998764 999999999
Q ss_pred HHHHHHHHH
Q psy15069 430 GAIFVSGVM 438 (461)
Q Consensus 430 ~~~l~~~~~ 438 (461)
++.++..++
T Consensus 159 ~~~~~~~il 167 (352)
T PF07690_consen 159 ILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHH
T ss_pred chhhhhhhh
Confidence 998888774
No 134
>PRK10504 putative transporter; Provisional
Probab=99.58 E-value=2e-14 Score=145.17 Aligned_cols=173 Identities=13% Similarity=0.211 Sum_probs=148.3
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
+.+|.+.++.++.....+.+..++|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|+|+..+ .+.++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~--~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF--TAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH--HHHHHHHH
Confidence 3577888888888888888899999999999999999999999999999999999999999987665544 44555555
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA 424 (461)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~ 424 (461)
+.+...+.++.+.+++..++.|++.+...+.....+.|.+|++++++++|+.+...++|..+||.++|.+.|+.| |++.
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~ 166 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWI 166 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHH
Confidence 555666777888888999999999999999999999999999999999999999999999999999999999874 9999
Q ss_pred HHHHhHHHHHHHHHHH
Q psy15069 425 FFLAGGAIFVSGVMLF 440 (461)
Q Consensus 425 f~~~~~~~l~~~~~~~ 440 (461)
|++...+..+..++..
T Consensus 167 f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 167 FLINIPVGIIGAIATL 182 (471)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988777666655544
No 135
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.57 E-value=6.5e-15 Score=144.57 Aligned_cols=163 Identities=19% Similarity=0.241 Sum_probs=138.0
Q ss_pred HHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhH
Q psy15069 276 FTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNY 355 (461)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (461)
+.+.....+....|.+.+++|.+..+.+++.+...++..++.++.|+++||+|+|+... .+.++.+++..+..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~--~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLA--VFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred HHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeH--HHHHHHHHHHHHHHHHcCH
Confidence 33444455666777777999999999999999999999999999999999987665544 4555666666667777899
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHH
Q psy15069 356 VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVS 435 (461)
Q Consensus 356 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~ 435 (461)
+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ |+..|++.+++.++.
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 161 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIW 161 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988865 999999888877766
Q ss_pred HHHHHH
Q psy15069 436 GVMLFV 441 (461)
Q Consensus 436 ~~~~~~ 441 (461)
.+..+.
T Consensus 162 ~~~~~~ 167 (399)
T TIGR00893 162 GVLWLK 167 (399)
T ss_pred HHHhhh
Confidence 655444
No 136
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.57 E-value=2.1e-14 Score=142.18 Aligned_cols=388 Identities=11% Similarity=0.070 Sum_probs=236.9
Q ss_pred Ccceeee--eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcC-----cceeeehhhHHHHHHHHHhhccc
Q psy15069 2 GVTYSFG--ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYG-----CRNVTICGAILGSACLAVSVFAK 74 (461)
Q Consensus 2 g~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----~r~~~~~g~~~~~~~~~l~~~~~ 74 (461)
|+.+++. ...|.+.+++|++++++....++..+... .-|+.|.+.|.+. ||+-++++.++.+++.+..+..+
T Consensus 2 G~~~~l~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~ 80 (433)
T PF03092_consen 2 GFAGGLSRLAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP 80 (433)
T ss_pred ChhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence 4545333 45677888899999999999999998885 5899999999875 56667788888866666554433
Q ss_pred ----chhhHHHHhhccccccccccchhHHHHHHhhh---hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHH
Q psy15069 75 ----NVITLCITIGFGTGLGFGLIYLPAIVSVTCYF---ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLV 147 (461)
Q Consensus 75 ----~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f---~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i 147 (461)
+.....+. -++..+|.+...+.+-+.+.|.. |+.||...+.......+|.+++..+.+.+.+..++|..|.+
T Consensus 81 ~~~~s~~~~~~~-l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i 159 (433)
T PF03092_consen 81 ASESSAAIAVVL-LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLI 159 (433)
T ss_pred cccchhhhHHHH-HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehH
Confidence 34444443 36677888888888877777765 44577888888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcccccccc
Q psy15069 148 LSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSK 227 (461)
Q Consensus 148 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (461)
.+++.++..+..+++.++++.++.++... .
T Consensus 160 ~~~~~~l~~~~~~~~~~e~~~~~~~~~~~--~------------------------------------------------ 189 (433)
T PF03092_consen 160 SAALPLLMLIVALFLLEERKVRPADEVFS--F------------------------------------------------ 189 (433)
T ss_pred HHHHHHHHHHHHHHhhhhccccccchhhc--c------------------------------------------------
Confidence 98888777666666655321111000000 0
Q ss_pred CCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHH-HHHHHhhccccchh-hHhhHHHHhC---CCchhh
Q psy15069 228 ATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTI-SNIFTSIGFNVPYV-YIVKLAEQRG---VTRSNA 302 (461)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~g---~s~~~~ 302 (461)
.++ +.+..+ ...|....+. ++.++.|.+|...+ ..++.......-.. ..-..-++.+ +++...
T Consensus 190 -----~~~-~~~~~~----~~~~~~~~~l--~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~ 257 (433)
T PF03092_consen 190 -----GKE-EVPCLF----GSFREQLSEL--WRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFY 257 (433)
T ss_pred -----ccc-ccchhh----HHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHH
Confidence 000 000000 0011122111 24566777766544 33333222211111 0000113445 888888
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHH-hhhhh---------hHHHHHHHHHHHhhhhhhH
Q psy15069 303 SSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVI-CAFCY---------NYVELAIYAGVFGAMIGAY 372 (461)
Q Consensus 303 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~l~g~~~~~~ 372 (461)
+.+..+..++.++|..+......+...|+. +..+.++..+..+. ..+.. +.+....-.++..+.....
T Consensus 258 ~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~--~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~ 335 (433)
T PF03092_consen 258 GTLSIVGSIASLLGILLYRKYFSNWSWRRI--FVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIA 335 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHH
Confidence 988888888888888887666665444433 22333333222211 11111 1111122233444444444
Q ss_pred HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC----C---chHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069 373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL----S---YSPAFFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g----~---~~~~f~~~~~~~l~~~~~~~~~~~~ 445 (461)
+-....+++++.|+..-|+.+|++..+.++|..++..++..+.+..+ + -....++..++.++...+..++++.
T Consensus 336 ~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~ 415 (433)
T PF03092_consen 336 FMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQ 415 (433)
T ss_pred HHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 44555678999999999999999999999999999988888776544 1 3345555555565555556566665
Q ss_pred hHhHhhhhhh
Q psy15069 446 QSYLLKRKEK 455 (461)
Q Consensus 446 ~~~~~~~~~~ 455 (461)
++..++.+.+
T Consensus 416 ~~~~~~~~~~ 425 (433)
T PF03092_consen 416 KRITDELDAD 425 (433)
T ss_pred chhhHHHhhc
Confidence 5444433333
No 137
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.56 E-value=3.2e-14 Score=144.36 Aligned_cols=173 Identities=16% Similarity=0.132 Sum_probs=147.5
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 345 (461)
.+..++++.++.......+.+.+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|+|+.. ..+.++..++
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l--~~~~~~~~~~ 84 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL--MLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHHHHHHHHH
Confidence 34557778888888888889999999999999999999999999999999999999999997655544 4566677777
Q ss_pred HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069 346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA 424 (461)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~ 424 (461)
.+.+.+.++.+.+++.+++.|++.+...+.....+.+.+ |+++|+++.|+......+|..+||.++|++.++. +|++.
T Consensus 85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~~ 163 (495)
T PRK14995 85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGSV 163 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHHH
Confidence 777888899999999999999999988888777776765 6789999999999999999999999999999987 49999
Q ss_pred HHHHhHHHHHHHHHHHH
Q psy15069 425 FFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 425 f~~~~~~~l~~~~~~~~ 441 (461)
|++...+.++..++.+.
T Consensus 164 f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 164 FLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988776666555433
No 138
>PRK03699 putative transporter; Provisional
Probab=99.56 E-value=2.8e-14 Score=140.66 Aligned_cols=173 Identities=14% Similarity=0.117 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 345 (461)
.++...+..++.......+...+|.+.+++|+|..+.+++.+...++..+++++.|++.||+|+|+. +..+.++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~--~~~~~~~~~i~ 85 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ--LIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHHH
Confidence 4555666666666666777788999999999999999999999999999999999999999765554 33555566666
Q ss_pred HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHH
Q psy15069 346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAF 425 (461)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f 425 (461)
.++..+.++++.+++.+++.|++.+...+....++.|.+|+++|+.+.+..+....+++.++|.+.+.+.+...+|+..|
T Consensus 86 ~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f 165 (394)
T PRK03699 86 VAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVY 165 (394)
T ss_pred HHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 66677778888888899999999998888888899999999999999999998889999999999998876545699999
Q ss_pred HHHhHHHHHHHHHHH
Q psy15069 426 FLAGGAIFVSGVMLF 440 (461)
Q Consensus 426 ~~~~~~~l~~~~~~~ 440 (461)
.+.+++.++..++.+
T Consensus 166 ~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 166 ACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988887766655443
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.56 E-value=6.5e-15 Score=146.31 Aligned_cols=179 Identities=17% Similarity=0.197 Sum_probs=144.8
Q ss_pred ccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069 262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI 341 (461)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~ 341 (461)
.|+|.++.+.+..++..++.......+|.+.++.+.++.+.+++.+...++.++++++.|+++||+++|+.... +..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~--~~~~ 91 (417)
T PRK10489 14 KTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL--ARGT 91 (417)
T ss_pred HhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe--hHHH
Confidence 46888888888888888888888889999998888999999999999999999999999999999877765443 2222
Q ss_pred HHHHHHHhh-----hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069 342 CGAATVICA-----FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 342 ~~~~~~~~~-----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
.+++.+... ..++++.+++..++.|++.+...+.....+.+.+|+++++++.++.+...++|..+||.++|.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~ 171 (417)
T PRK10489 92 CGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA 171 (417)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 232222211 245677777888889998888888888889999999999999999999999999999999999998
Q ss_pred ccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 417 STLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 417 ~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
..| |++.|++.++..+++.+..+.++
T Consensus 172 ~~~-~~~~~~~~~~~~~~~~~~~~~l~ 197 (417)
T PRK10489 172 AGG-VAWNYGLAAAGTFITLLPLLRLP 197 (417)
T ss_pred HHh-hHHHHHHHHHHHHHHHHHHHhCC
Confidence 764 89999888877776666555444
No 140
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.56 E-value=3.5e-14 Score=143.90 Aligned_cols=173 Identities=18% Similarity=0.256 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT 346 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 346 (461)
+..++++.++...........+|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|+|+.. ..+.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF--LISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH--HHHHHHHHHHH
Confidence 3455666777777777788889999999999999999999999999999999999999997655543 35566667777
Q ss_pred HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069 347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF 426 (461)
Q Consensus 347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~ 426 (461)
++..+.++.+.+++..++.|++.+...+....++.|.+|+++|+++.++......+|..+||.++|++.++. +|++.|+
T Consensus 82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~~f~ 160 (485)
T TIGR00711 82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRWIFL 160 (485)
T ss_pred HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cceehhh
Confidence 777788899999999999999999999999999999999999999999999999999999999999999986 4999999
Q ss_pred HHhHHHHHHHHHHHHH
Q psy15069 427 LAGGAIFVSGVMLFVI 442 (461)
Q Consensus 427 ~~~~~~l~~~~~~~~~ 442 (461)
+.+.+.++..++.+..
T Consensus 161 ~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 161 INVPIGIIVVVVAFFI 176 (485)
T ss_pred hhhHHHHHHHHHHHHH
Confidence 8887776665554433
No 141
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.56 E-value=5.5e-14 Score=140.04 Aligned_cols=163 Identities=12% Similarity=0.138 Sum_probs=137.7
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
+.+....+.++............+|.+.+++|.+..+.++..+...++..++.++.|+++||+|+|+.. ..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l--~~~~~~~~~ 95 (426)
T PRK12307 18 NALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM--MWSIVAYSV 95 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHHH
Confidence 334555666666666766777777887899999999999999999999999999999999997655544 456666667
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHH
Q psy15069 345 ATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPA 424 (461)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~ 424 (461)
+.++..+.++.+.+++..++.|++.+...+....++.|.+|+++|+++.++......+|.+++|.+.+.+.+.. +|+..
T Consensus 96 ~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w~~~ 174 (426)
T PRK12307 96 GTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GWRAA 174 (426)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CHHHH
Confidence 77777788899999999999999999999999999999999999999999999999999999999988888876 59999
Q ss_pred HHHHhH
Q psy15069 425 FFLAGG 430 (461)
Q Consensus 425 f~~~~~ 430 (461)
|++...
T Consensus 175 f~i~~~ 180 (426)
T PRK12307 175 FFVGLL 180 (426)
T ss_pred HHHHHH
Confidence 987543
No 142
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.55 E-value=4.6e-14 Score=139.26 Aligned_cols=168 Identities=13% Similarity=0.134 Sum_probs=143.1
Q ss_pred HHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT 346 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 346 (461)
+.+....++...+.+...+++|.++ ++.|++..+.|++.+...+...+.+++.|+++||+++|+. +..+.++.++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~--l~~~~~~~~~~~ 90 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM--IVTGMLMRAAGF 90 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH--HHHHHHHHHHHH
Confidence 4556777788888888899999887 7889999999999999999999999999999999765444 445666667777
Q ss_pred HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069 347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF 426 (461)
Q Consensus 347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~ 426 (461)
+...+.++.+.+++..++.|++.+...+...+++.+.+|+++|+++.|+.+...++|..+||.++|++.+ . +|+..|+
T Consensus 91 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-~-g~~~~f~ 168 (400)
T PRK11646 91 ATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-Y-DFRLVCA 168 (400)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-hHHHHHH
Confidence 7777778888888889999999888888888999999999999999999999999999999999999984 4 5999999
Q ss_pred HHhHHHHHHHHHH
Q psy15069 427 LAGGAIFVSGVML 439 (461)
Q Consensus 427 ~~~~~~l~~~~~~ 439 (461)
+.+++.++..+..
T Consensus 169 ~~~~~~~~~~i~~ 181 (400)
T PRK11646 169 TGAVLFVLAAAFN 181 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 8887777665443
No 143
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.55 E-value=3.8e-14 Score=143.48 Aligned_cols=183 Identities=16% Similarity=0.177 Sum_probs=141.7
Q ss_pred hccccccchh-HHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC-CCcchhH
Q psy15069 257 LDMELLRDPI-FILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR-PCVNRLY 333 (461)
Q Consensus 257 ~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~ 333 (461)
.+.+.+|+|+ ++..++..++..++++.+..+++.|+ +++|++..+++.+.+.+........+++|+++|| +|+|+..
T Consensus 12 ~~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~ 91 (500)
T PRK09584 12 VSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI 91 (500)
T ss_pred CChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 3345677774 78888888899999999999999999 8899999998888877666656666789999999 4766554
Q ss_pred HHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc--hhHHHHHHHHHHHhhhhhccce
Q psy15069 334 IYNGCLAICGAATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR--LTNAFGLLLLFQGIASLVGPPI 410 (461)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~gp~i 410 (461)
+ .+.++.+++.+++.+.+ +.+.+++..++.|++.|...+...+++.+.+|+++ +..++++.+...++|..+||.+
T Consensus 92 ~--~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 92 M--LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred H--HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 4 44555555555555543 44455566788899999888888889999998543 4568899999999999999999
Q ss_pred eeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 411 AGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 411 ~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
.|++.|..| |++.|.+.++..+++.+..+..
T Consensus 170 ~g~l~~~~g-~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 170 TPWLAAKYG-WSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHh
Confidence 999999875 9999998877666665544443
No 144
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.55 E-value=7.4e-14 Score=138.20 Aligned_cols=171 Identities=13% Similarity=0.161 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT 346 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 346 (461)
+...+...++.....+......|.+.+++|.++.+.+++.+...++..++.++.|+++||+|+|+... .+.++.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~ 94 (406)
T PRK11551 17 IGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILI--VSVALFGLFS 94 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH--HHHHHHHHHH
Confidence 44455556666666677777888888999999999999999999999999999999999987666554 3444555656
Q ss_pred HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHH
Q psy15069 347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFF 426 (461)
Q Consensus 347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~ 426 (461)
+...+.++++.+.+..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+.. +|+..|+
T Consensus 95 ~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 173 (406)
T PRK11551 95 LATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA-AWRHIFY 173 (406)
T ss_pred HHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-CHHHHHH
Confidence 666677889999999999999999999999999999999999999999999999999999999988888776 4999998
Q ss_pred HHhHHHHHHHHHHH
Q psy15069 427 LAGGAIFVSGVMLF 440 (461)
Q Consensus 427 ~~~~~~l~~~~~~~ 440 (461)
+.+++.++..+...
T Consensus 174 ~~~~~~~~~~~~~~ 187 (406)
T PRK11551 174 VGGVGPLLLVPLLM 187 (406)
T ss_pred HHHHHHHHHHHHHH
Confidence 87776555554433
No 145
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=4.7e-14 Score=137.69 Aligned_cols=167 Identities=16% Similarity=0.124 Sum_probs=135.9
Q ss_pred HHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh
Q psy15069 272 ISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF 351 (461)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (461)
+...+.....+.+....|.+.+++|++..+.+++.+...++..+++++.|+++||+|+|+... .+.++.+++.+...+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~--~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 10 VIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAM--LGGILYGLGFTFYAI 87 (377)
T ss_pred HHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhH--HhHHHHHHHHHHHHH
Confidence 333333444566777888888999999999999999999999999999999999987666544 456666777777788
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069 352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA 431 (461)
Q Consensus 352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~ 431 (461)
.++++.+++.+++.|++.+...+.....+.+.+| ++|+++.++......+|..+++++.+.+.+.. +|++.|++.+++
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~ 165 (377)
T TIGR00890 88 ADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGII 165 (377)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHH
Confidence 8899999999999999999888777778888887 67999999999999999888777777777765 599999998888
Q ss_pred HHHHHHHHHHH
Q psy15069 432 IFVSGVMLFVI 442 (461)
Q Consensus 432 ~l~~~~~~~~~ 442 (461)
.++..+..+..
T Consensus 166 ~~~~~~~~~~~ 176 (377)
T TIGR00890 166 FLLVIVLGAFL 176 (377)
T ss_pred HHHHHHHHHHh
Confidence 77766555443
No 146
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.53 E-value=9.4e-14 Score=136.82 Aligned_cols=169 Identities=14% Similarity=0.131 Sum_probs=139.5
Q ss_pred HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
.....+....+.......+|.+.+++|.+..+.++..+...++..++.++.|+++||+|+|+.. ..+.+..++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l--~~~~~~~~i~~~~~ 85 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA--IPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH--HHHHHHHHHHHHHH
Confidence 4444555555666666889999999999999999999999999999999999999997765443 35555666666666
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069 350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG 429 (461)
Q Consensus 350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~ 429 (461)
...++.+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....++..++|.+++.+.+.. +|+..|++.+
T Consensus 86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~ 164 (392)
T PRK10473 86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMA 164 (392)
T ss_pred HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHH
Confidence 777788888888899999999888889999999999999999999999999999999999999888776 4999999988
Q ss_pred HHHHHHHHHHHH
Q psy15069 430 GAIFVSGVMLFV 441 (461)
Q Consensus 430 ~~~l~~~~~~~~ 441 (461)
++.++..+..+.
T Consensus 165 ~~~~i~~~~~~~ 176 (392)
T PRK10473 165 AMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHH
Confidence 877766655433
No 147
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.52 E-value=7.7e-14 Score=137.31 Aligned_cols=173 Identities=18% Similarity=0.169 Sum_probs=137.4
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 343 (461)
+|.++.++++.++..++........+.+.++++.+..+.+++.+.+.+...+..++.|+++||+++|+.++. +.++.+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~--~~~~~~ 79 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFI--ANGIKL 79 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHH--HHHHHH
Confidence 456788888888888877666677777778999999999999999999999999999999999877765553 334444
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchH
Q psy15069 344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSP 423 (461)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~ 423 (461)
+..+.+.+..+. ++.+++.|++.+...|...+++.|++|+++|+++.|+.+....++..+||.++|.+.+.. |..
T Consensus 80 ~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--~~~ 154 (393)
T PRK11195 80 LGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--AEA 154 (393)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 443333344443 556788999999999999999999999999999999999999999999999999999963 777
Q ss_pred HHHHHhHHHHHHHHHHHHHH
Q psy15069 424 AFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 424 ~f~~~~~~~l~~~~~~~~~~ 443 (461)
.+.+.+.+.+++.+..+.++
T Consensus 155 ~~~i~~~~~~~~~~~~~~l~ 174 (393)
T PRK11195 155 ALAVCALIYLLAALFNLFIP 174 (393)
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 77766666555554444444
No 148
>KOG2816|consensus
Probab=99.52 E-value=2.3e-13 Score=134.13 Aligned_cols=321 Identities=19% Similarity=0.243 Sum_probs=220.6
Q ss_pred HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhh-hccch
Q psy15069 33 VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRS 111 (461)
Q Consensus 33 ~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg 111 (461)
.+...+.++..|.+.||+|||..+....+...+..+...+.. +|.+.+ ..+ .| +.++......+++++.. .++|.
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~~-~~l-~g-~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFLL-LGL-SG-GFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhhh-ccc-cc-chhhhhhhhhhheeeccchhHHH
Confidence 566678899999999999999999999999998888777755 333332 221 11 22344555666777776 58899
Q ss_pred hhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCccccccccccc
Q psy15069 112 LATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKP 191 (461)
Q Consensus 112 ~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (461)
...|+.......+..++|.+++.+.+.+|.-.+|.+..+..+...+..++..|++..+++.+.. .
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~--~------------- 212 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA--T------------- 212 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc--c-------------
Confidence 9999999999999999999999999999999999999999888888777777655332211000 0
Q ss_pred ccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHH
Q psy15069 192 KQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFT 271 (461)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 271 (461)
.++. .+++.. +.+ ......... ..-.+|..+.++
T Consensus 213 -~~~~---------------------~~~~~~---------~~~-------------~~~~~~~~~--~~~~~r~~l~l~ 246 (463)
T KOG2816|consen 213 -LREL---------------------TPGSLD---------SSH-------------VADAFQSLT--KVGPDRLLLLLL 246 (463)
T ss_pred -cccc---------------------CCCccc---------chh-------------hhhhhhhhc--ccCCCccchHHH
Confidence 0000 000000 000 000000000 012234444444
Q ss_pred HHHHHHhhcc-ccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhh-hccCCCCcchhHHHHHHHHHHHHHHHH
Q psy15069 272 ISNIFTSIGF-NVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILG-YISDRPCVNRLYIYNGCLAICGAATVI 348 (461)
Q Consensus 272 ~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~ 348 (461)
+..++..... ....-.++.|+ ..+++++.+.+...+..+....+++.+.. .+...++.++ +...++..-.+..+.
T Consensus 247 l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~--~i~lGl~~~~~~~~~ 324 (463)
T KOG2816|consen 247 LVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR--LISLGLLSEFLQLLL 324 (463)
T ss_pred HHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--HhhHHHHHHHHHHHH
Confidence 4444433332 22221345566 67899999999999999999999998877 5555555555 555677777777888
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCc
Q psy15069 349 CAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSY 421 (461)
Q Consensus 349 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~ 421 (461)
..+..+.|.++....+.+ ......|..-+.+..+.+++++|++.++...+..+...++|.+.+.++..+-++
T Consensus 325 ~af~~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~ 396 (463)
T KOG2816|consen 325 FAFATETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDD 396 (463)
T ss_pred HHHhccchhhhHHHHHHH-hhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 888888888776665554 445567777888999999999999999999999999999999999887554333
No 149
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=1.3e-13 Score=136.39 Aligned_cols=175 Identities=19% Similarity=0.256 Sum_probs=140.4
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchh-----hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSN-----ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGC 338 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~ 338 (461)
++.+..+++..++...+......++|.+.+++|.+..+ .+++.++..+...++.++.|+++||+++|+.. ..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~ 90 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML--LRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH--HHH
Confidence 33455667777778888888888999999999988655 47888899999999999999999997655443 345
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069 339 LAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418 (461)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~ 418 (461)
.+..++..++..+.++++.+++..++.|++.+ ..+.....+.+.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 169 (408)
T PRK09874 91 ALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY 169 (408)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55556666666677888888888889998755 45666778889999999999999999999999999999999999876
Q ss_pred CCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 419 LSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 419 g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+ |+..|++.+++.++..+..+..
T Consensus 170 ~-~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 170 G-LRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4 9999998888777666554443
No 150
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.52 E-value=7.7e-14 Score=140.51 Aligned_cols=175 Identities=17% Similarity=0.210 Sum_probs=140.1
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC-CCcchhHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR-PCVNRLYIYNGCLAIC 342 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~ 342 (461)
+.++.++...+...+++|....+++.|+ +++|++..+++++.+.+.....+..+++|+++|| +|+||..+ .+.++.
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~--~g~~~~ 91 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIV--LGAIVL 91 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHH--HHHHHH
Confidence 3567777788888999999999999998 7799999999999999888888888999999999 78777655 455555
Q ss_pred HHHHHHhhhhhhHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 343 GAATVICAFCYNYV-ELAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 343 ~~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
+++.+++.+..+.. .+++.+++.|++.|...|...+++.|.+|++ +|+.++++.+...++|..+||.++|++.++.|
T Consensus 92 ~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 92 AIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 55555555554433 3446778889999999999999999999877 45779999999999999999999999999875
Q ss_pred CchHHHHHHhHHHHHHHHHHHHH
Q psy15069 420 SYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 420 ~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
|++.|++.++..+++.+.....
T Consensus 172 -w~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 172 -YSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999988766554444444333
No 151
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.52 E-value=1.2e-13 Score=135.16 Aligned_cols=169 Identities=14% Similarity=0.167 Sum_probs=133.0
Q ss_pred HHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 271 TISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
++.+++...+.....+.+|.++ +++|.+..+.+++.+...+...+.+++.|+++||+|+||..+. .+.....+..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~-~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL-FCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH-HHHHHHHHHHHHH
Confidence 4456677777788888999987 6899999999999999999999999999999999877665443 3334444445556
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH--HHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069 350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA--FGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL 427 (461)
Q Consensus 350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~ 427 (461)
.+.++++.+++..++.|.+.+...|....+..|..|+++|+.+ .+......++|..+||.+++.+.+.. +|+..|++
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~f~~ 160 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVMFLT 160 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHHHHH
Confidence 6677888777777777877777778877888888877766654 57888888999999999999999876 49999999
Q ss_pred HhHHHHHHHHHHHH
Q psy15069 428 AGGAIFVSGVMLFV 441 (461)
Q Consensus 428 ~~~~~l~~~~~~~~ 441 (461)
.+++.++..+..+.
T Consensus 161 ~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 161 AALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877766655443
No 152
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.51 E-value=6.3e-14 Score=141.24 Aligned_cols=174 Identities=7% Similarity=-0.019 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT 346 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 346 (461)
+....+.+++.+.....+....|.+.+++|++..+.+++.+.+.++..++.++.|+++||+|+|+... .++++.++..
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~--~~~~~~~~~~ 108 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLP--FLLILSAICM 108 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHH--HHHHHHHHHH
Confidence 34455566666667777888899988999999999999999999999999999999999987666543 3333333333
Q ss_pred HHhh-----hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc--C
Q psy15069 347 VICA-----FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST--L 419 (461)
Q Consensus 347 ~~~~-----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~--g 419 (461)
+... ..++++.+++.+++.|++.+...+....++.+++|+++|+++.|+.+....+|.++++.+..++.+.. +
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~ 188 (467)
T PRK09556 109 LGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDG 188 (467)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccC
Confidence 3332 35788899999999999999888999999999999999999999999999999999998877666542 3
Q ss_pred CchHHHHHHhHHHHHHHHHHHHH
Q psy15069 420 SYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 420 ~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+|+..|.+.+++.++.++..++.
T Consensus 189 ~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 189 HVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred cchhHHHHHHHHHHHHHHHHHHh
Confidence 58888888777776655554443
No 153
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.51 E-value=1.5e-13 Score=136.00 Aligned_cols=160 Identities=13% Similarity=0.090 Sum_probs=133.8
Q ss_pred hhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHH
Q psy15069 278 SIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVE 357 (461)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (461)
......+.+.+|.+.+++|.++.+.++..+.+.++..++.++.|+++||+++|+... .+..+.+++.+...+.++.+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~--~~~~~~~~~~~~~~~~~~~~~ 103 (406)
T PRK15402 26 YIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVML--AGVAFFILTCLAILLAQSIEQ 103 (406)
T ss_pred HhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH--HHHHHHHHHHHHHHHHccHHH
Confidence 345566667778888999999999999999999999999999999999987665433 455566666666677788888
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHH
Q psy15069 358 LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV 437 (461)
Q Consensus 358 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~ 437 (461)
+++..++.|++.+...+.....+.|.+|++++.++.++......++..+||.+++.+.+.. +|+..|++.+++.++..+
T Consensus 104 l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~~~~~~~~ 182 (406)
T PRK15402 104 FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAALAALSFF 182 (406)
T ss_pred HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHH
Confidence 8888999999998888888889999999999999999998888899999999999998876 599999988888777665
Q ss_pred HHH
Q psy15069 438 MLF 440 (461)
Q Consensus 438 ~~~ 440 (461)
..+
T Consensus 183 ~~~ 185 (406)
T PRK15402 183 GLW 185 (406)
T ss_pred HHH
Confidence 543
No 154
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.51 E-value=6.8e-14 Score=138.15 Aligned_cols=168 Identities=13% Similarity=0.084 Sum_probs=135.2
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 342 (461)
++++..+.+..++...+.......+|.++ +++|.|..+.+++.+...++..+++++.|+++||+|+|+.... +.++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~--~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF--GLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH--HHHHH
Confidence 45677788888888888888888999887 7889999999999999999999999999999999887776553 33333
Q ss_pred HHH---HHHhhhhh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069 343 GAA---TVICAFCY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL 414 (461)
Q Consensus 343 ~~~---~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l 414 (461)
+++ .....+.+ +++.+++.+++.|++.+...+....++.+.+|+++|+++.++......+|..+||.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 222 22222222 4556778889999999998888888889999999999999999999999999999999999
Q ss_pred ecccCCchHHHHHHhHHHHH
Q psy15069 415 YDSTLSYSPAFFLAGGAIFV 434 (461)
Q Consensus 415 ~~~~g~~~~~f~~~~~~~l~ 434 (461)
.+..| |+..+++.+++.++
T Consensus 172 ~~~~g-~~~~~~~~~~~~~~ 190 (399)
T PRK05122 172 YHWGG-LAGLGLLIMLLALL 190 (399)
T ss_pred HHccc-HHHHHHHHHHHHHH
Confidence 98875 88877765554433
No 155
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.50 E-value=1.4e-13 Score=134.89 Aligned_cols=157 Identities=17% Similarity=0.243 Sum_probs=134.3
Q ss_pred cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069 281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI 360 (461)
Q Consensus 281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (461)
...+.+.+|.+.+++|+++.+.+++.+...++..+++++.|+++||+++|+. +..+.++.+++.+...+.++.+.+++
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV--ILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH--HHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 3445678888999999999999999999999999999999999999765443 44566666677777777888888889
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 361 YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 361 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+..+ |+..|++.+++.++..+...
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHHH
Confidence 99999999999889999999999999999999999999999999999999999999764 99999888877776655443
No 156
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.50 E-value=2.6e-13 Score=133.63 Aligned_cols=153 Identities=12% Similarity=0.036 Sum_probs=132.3
Q ss_pred ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069 282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY 361 (461)
Q Consensus 282 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (461)
..+...+|.+.+++|.|.++.+++.+.+.++..++.++.|+++||+|+|+.. ..+..+.+++.+...++++++.+++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l--~~~~~l~~~~~~~~~~a~~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV--AISLLLIAVGALMRELYPQSALLLSS 103 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH--HHHHHHHHHHHHHHHHCcchHHHHHH
Confidence 5677889999999999999999999999999999999999999997655554 46777888888888899999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHH
Q psy15069 362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV 437 (461)
Q Consensus 362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~ 437 (461)
+++.|++.+...+....++.+.+| ++|+.+.|+......+|..+|+.+.+.+.++.++|+..+.+.++..++..+
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 999999999988888889999997 789999999999999999999999999888765698887766555444433
No 157
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.50 E-value=2.3e-14 Score=140.03 Aligned_cols=165 Identities=13% Similarity=0.122 Sum_probs=136.5
Q ss_pred HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069 274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY 353 (461)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (461)
+++.+.....+....|.+.+++|.+..+.+++.+...++..++.++.|+++||+++|+.. ..+.++.+++.++..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL--PIGLILCAIVNLFFGFST 81 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh--HHHHHHHHHHHHHHHHhh
Confidence 445556666777788887799999999999999999999999999999999997765544 355666667777777888
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcc-ceeeeeecccCCchHHHHHHhHHH
Q psy15069 354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGP-PIAGFLYDSTLSYSPAFFLAGGAI 432 (461)
Q Consensus 354 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp-~i~g~l~~~~g~~~~~f~~~~~~~ 432 (461)
+.+.+++..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++| .+.+.+.+.. +|+..|++.+++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIVPGIIA 160 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 4655565554 5999998888777
Q ss_pred HHHHHHHHH
Q psy15069 433 FVSGVMLFV 441 (461)
Q Consensus 433 l~~~~~~~~ 441 (461)
++..+..+.
T Consensus 161 ~~~~~~~~~ 169 (379)
T TIGR00881 161 IIVSLICFL 169 (379)
T ss_pred HHHHHHHhe
Confidence 665554443
No 158
>PRK11043 putative transporter; Provisional
Probab=99.50 E-value=2.9e-13 Score=133.77 Aligned_cols=166 Identities=10% Similarity=0.125 Sum_probs=134.6
Q ss_pred HHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh
Q psy15069 275 IFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN 354 (461)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (461)
.+..++...+.+.+|.+.+++|.++.+.++..+...++..+++++.|+++||+++|+... .+..+.++..+...+.++
T Consensus 16 ~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~~~~~~~~~ 93 (401)
T PRK11043 16 MLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLL--AGLSLFALGSLGMLWVES 93 (401)
T ss_pred HHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHH--HHHHHHHHHHHHHHHhcC
Confidence 333444445555556667899999999999999999999999999999999987665443 455555666666667788
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHH
Q psy15069 355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFV 434 (461)
Q Consensus 355 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~ 434 (461)
.+.+.+..++.|++.+...+....++.|.+|+++++...+..+....++..++|.+++++.+..| |+..|++.+++.++
T Consensus 94 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~ 172 (401)
T PRK11043 94 AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAITLL 172 (401)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHH
Confidence 88888889999998887777778889999999989999999999999999999999999999874 99999988887777
Q ss_pred HHHHHHHHH
Q psy15069 435 SGVMLFVIP 443 (461)
Q Consensus 435 ~~~~~~~~~ 443 (461)
..+..+..+
T Consensus 173 ~~~~~~~~~ 181 (401)
T PRK11043 173 LILPTLRLK 181 (401)
T ss_pred HHHHHHHcC
Confidence 666555443
No 159
>TIGR00895 2A0115 benzoate transport.
Probab=99.49 E-value=8.4e-14 Score=137.02 Aligned_cols=166 Identities=16% Similarity=0.177 Sum_probs=135.5
Q ss_pred HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
..+..+.............|.+.+++|.+..+.+++.+...++.+++.++.|+++||+++|+. +..+.++.+++.++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~--~~~~~~~~~~~~~~~ 99 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV--LLWSILLFSVFTLLC 99 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH--HHHHHHHHHHHHHHH
Confidence 333444444455556667788889999999999999999999999999999999999764443 335555666666666
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069 350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG 429 (461)
Q Consensus 350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~ 429 (461)
.+.++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+.+++.+..| |+..|++.+
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~ 178 (398)
T TIGR00895 100 ALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-WRSLFYVGG 178 (398)
T ss_pred HHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-ceeehhhhh
Confidence 7778888888889999999999999999999999999999999999999999999999999999998865 888888886
Q ss_pred HHHHHHHHH
Q psy15069 430 GAIFVSGVM 438 (461)
Q Consensus 430 ~~~l~~~~~ 438 (461)
++.++..+.
T Consensus 179 ~~~~~~~~~ 187 (398)
T TIGR00895 179 IAPLLLLLL 187 (398)
T ss_pred hHHHHHHHH
Confidence 555544443
No 160
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=2.3e-13 Score=134.00 Aligned_cols=166 Identities=13% Similarity=0.115 Sum_probs=131.7
Q ss_pred cchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069 263 RDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAI 341 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~ 341 (461)
.++.++.+.+..++...+.....+.+|.++ +++|.|..+.+++.+...++..+++++.|+++||+|+||..+. +.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~--~~~~ 90 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQ--GMLA 90 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHH--HHHH
Confidence 455667777777777777778888899887 7899999999999999999999999999999999877665443 3222
Q ss_pred HHHHH---HHhhh-----hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee
Q psy15069 342 CGAAT---VICAF-----CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF 413 (461)
Q Consensus 342 ~~~~~---~~~~~-----~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~ 413 (461)
..++. .+..+ .++++.+++.+++.|++.+...+...+++.+.+|+++|++++++......+|..+||.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 91 CGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred HHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 22221 11111 24677788889999999998888888889999999999999999999999999999999999
Q ss_pred eecccCCchHHHHHHhHH
Q psy15069 414 LYDSTLSYSPAFFLAGGA 431 (461)
Q Consensus 414 l~~~~g~~~~~f~~~~~~ 431 (461)
+.+..| |+..+.+..++
T Consensus 171 l~~~~g-~~~~~~~~~~~ 187 (392)
T PRK12382 171 LHSHFG-FAALALTTMVL 187 (392)
T ss_pred HHhccC-hHHHHHHHHHH
Confidence 988765 88766554433
No 161
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=2.9e-13 Score=137.62 Aligned_cols=164 Identities=18% Similarity=0.230 Sum_probs=138.9
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 345 (461)
.+..+.+..++..+........+|.+.+++|.+..+.+++.+...++.+++.++.|+++||+|+|+.. ..+.++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~ 98 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM--VISIVLFSVG 98 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--HHHHHHHHHH
Confidence 45556677777777777777788888899999999999999999999999999999999997655543 3555666666
Q ss_pred HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHH
Q psy15069 346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAF 425 (461)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f 425 (461)
.++..+.++++.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.. +|++.|
T Consensus 99 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w~~~f 177 (496)
T PRK03893 99 TLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW-GWRALF 177 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CHHHHH
Confidence 6777778889999999999999999999999999999999999999999999999999999999999999876 599988
Q ss_pred HHHhHHH
Q psy15069 426 FLAGGAI 432 (461)
Q Consensus 426 ~~~~~~~ 432 (461)
++..+..
T Consensus 178 ~~~~~~~ 184 (496)
T PRK03893 178 FIGILPI 184 (496)
T ss_pred HHHHHHH
Confidence 7644433
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.49 E-value=3.8e-13 Score=135.70 Aligned_cols=167 Identities=11% Similarity=0.117 Sum_probs=128.4
Q ss_pred HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069 274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY 353 (461)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (461)
.++.....+....++|.+.+++|++..+.+++.+...++..++.++.|+++||+|+|+.. ..+.++.++..++..+.+
T Consensus 45 ~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~--~~~~~~~~~~~~~~~~~~ 122 (476)
T PLN00028 45 FFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS--AFLLMLTAPAVFCMSLVS 122 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHHHHHHHHHHhc
Confidence 444444455566677788899999999999999999999999999999999998766543 345666667777777788
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec----c----cCCchHHH
Q psy15069 354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD----S----TLSYSPAF 425 (461)
Q Consensus 354 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~----~----~g~~~~~f 425 (461)
+.+.+++.+++.|++.+...+ ...++.+++|+++|+++.|+.+...++|..+++.+.+.+.+ . ..+|++.|
T Consensus 123 s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f 201 (476)
T PLN00028 123 SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAF 201 (476)
T ss_pred CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHH
Confidence 888888888899988876443 44578899999999999999998888888877766654432 1 12599999
Q ss_pred HHHhHHHHHHHHHHHHHH
Q psy15069 426 FLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 426 ~~~~~~~l~~~~~~~~~~ 443 (461)
++.+++.++..+..++++
T Consensus 202 ~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 202 FVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999988877766655554
No 163
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.49 E-value=1.9e-13 Score=135.95 Aligned_cols=173 Identities=14% Similarity=0.170 Sum_probs=132.4
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-CcchhHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-CVNRLYIYNGCLAICG 343 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 343 (461)
.++.++...+...+++|....++|.|+ +++|++..+++.+.+.+.....++.+++|+++||+ |+||..+ .+.++..
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il--iG~il~~ 87 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM--LGALLMA 87 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH--HHHHHHH
Confidence 466677777788889999999999999 66899999999999999999999999999999997 7666544 4444444
Q ss_pred HHHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069 344 AATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS 420 (461)
Q Consensus 344 ~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~ 420 (461)
++.+++...+ +....++...+..++.|...+...+++.|.+|++ +|.++.++.+...++|+.++|.+.|++.+..|
T Consensus 88 lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G- 166 (493)
T PRK15462 88 IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS- 166 (493)
T ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-
Confidence 4444333322 2223333444555666666677788899999875 69999999999999999999999999998765
Q ss_pred chHHHHHHhHHHHHHHHHHHH
Q psy15069 421 YSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 421 ~~~~f~~~~~~~l~~~~~~~~ 441 (461)
|+..|.+.++..+++.+..+.
T Consensus 167 w~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 167 WAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999999877766555554443
No 164
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.49 E-value=2.7e-13 Score=135.59 Aligned_cols=175 Identities=13% Similarity=0.107 Sum_probs=133.0
Q ss_pred cchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069 263 RDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 342 (461)
+++.++...+.+...+.....+....|.+. +.|+++++.++..+...++..++.++.|+++||+++|+... .+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~--~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLP--AGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehH--HHHHHH
Confidence 444555566666666665555666666554 46999999999999999999999999999999987655433 444455
Q ss_pred HHHHHHhhhh----hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069 343 GAATVICAFC----YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418 (461)
Q Consensus 343 ~~~~~~~~~~----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~ 418 (461)
+++.++.... ++.+.+.+..++.|++.+...+.....+.|++|+++|+++.|+.+...++|+.++|.+.+.+.+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 5554444332 355666777888999988888888888999999999999999999999999999998887666544
Q ss_pred CCchHHHHHHhHHHHHHHHHHH
Q psy15069 419 LSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 419 g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.+|+..|++.+++.++..+..+
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAF 203 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 4699999998888777554433
No 165
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.49 E-value=3e-13 Score=131.83 Aligned_cols=170 Identities=14% Similarity=0.169 Sum_probs=132.6
Q ss_pred hHHHHHHHHHHHhhccccchhhHhh-HHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVK-LAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
.+|..+++.+......+.+.++.|. +.+++|+++.+.+++.+...++..++.++.|+++||+|+|+..+ .+.++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~i 79 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTT--LSLLLLAI 79 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHH--HHHHHHHH
Confidence 4677778888888888888999997 44899999999999999999999999999999999977655443 55666667
Q ss_pred HHHHhhhhh-hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc------
Q psy15069 345 ATVICAFCY-NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS------ 417 (461)
Q Consensus 345 ~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~------ 417 (461)
+.++..+.+ +++.+++..++.|++.+. .+....++.+.+|+++|+++.++.....++|..+++.+++.+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~ 158 (366)
T TIGR00886 80 PCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAG 158 (366)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccc
Confidence 777777778 888888899999988654 455677899999999999999999988888887777776665542
Q ss_pred ---cCCchHHHH-HHhHHHHHHHHH
Q psy15069 418 ---TLSYSPAFF-LAGGAIFVSGVM 438 (461)
Q Consensus 418 ---~g~~~~~f~-~~~~~~l~~~~~ 438 (461)
..+|++.|+ ..+++.++..++
T Consensus 159 ~~~~~~w~~~~~~~~~~~~~~~~~~ 183 (366)
T TIGR00886 159 LPAHLAWGWAFVIVPAGILLLPALL 183 (366)
T ss_pred ccccccccchhHHHHHHHHHHHHHH
Confidence 125888884 334444443333
No 166
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.48 E-value=4e-13 Score=132.42 Aligned_cols=168 Identities=15% Similarity=0.115 Sum_probs=136.4
Q ss_pred HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV 347 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 347 (461)
+......++.........+.+|.+.+++|.|+.+.+++.+...++..++.++.|+++||+|+|+... .+..+..+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~--~~~~~~~~~~~ 88 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVIL--VGMSIFILGTL 88 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH--HHHHHHHHHHH
Confidence 3344444444555556667788888999999999999999999999999999999999987655443 45555566666
Q ss_pred HhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069 348 ICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL 427 (461)
Q Consensus 348 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~ 427 (461)
...+.++.+.+++.+++.|++.+...+....+..|.+++++++.+.++.+....++..++|.+++.+.+..| |+..|++
T Consensus 89 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~f~~ 167 (394)
T PRK11652 89 VALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WRACYLF 167 (394)
T ss_pred HHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hHHHHHH
Confidence 666778888888999999999888788888888999998999999999999999999999999999988764 9999998
Q ss_pred HhHHHHHHHHH
Q psy15069 428 AGGAIFVSGVM 438 (461)
Q Consensus 428 ~~~~~l~~~~~ 438 (461)
.+++.++..+.
T Consensus 168 ~~~~~~~~~~~ 178 (394)
T PRK11652 168 LLLLGAGVTFS 178 (394)
T ss_pred HHHHHHHHHHH
Confidence 87766655443
No 167
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.48 E-value=1.4e-13 Score=123.99 Aligned_cols=163 Identities=20% Similarity=0.252 Sum_probs=132.1
Q ss_pred CcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc-------c
Q psy15069 2 GVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA-------K 74 (461)
Q Consensus 2 g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~-------~ 74 (461)
|..|+||.+.|++.+++|.|..|...+.....++..+ +++.|.+.||+|+|.++.+|.++..+++.+...+ .
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~ 94 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSL 94 (250)
T ss_pred CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCcc
Confidence 8899999999999999999999999999999999875 6999999999999999999999999999876443 3
Q ss_pred chhhHHHHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHH-HH
Q psy15069 75 NVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVT-VL 153 (461)
Q Consensus 75 ~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~-~l 153 (461)
++|.+++ +.++.|.+.+....++.....+.||++||.+.|+.-+..++++.+...+...+.+.-.-+. +++++.. .+
T Consensus 95 ~~~~~~~-~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f-ll~la~~~~~ 172 (250)
T PF06813_consen 95 PVWLMCL-FLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF-LLFLAVLPAV 172 (250)
T ss_pred chHHHHH-HHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH-HHHHHHHHHH
Confidence 6777776 4577788877777787777778999999999999999999999999998888876522333 3344443 33
Q ss_pred HHHHHHhhcccCCC
Q psy15069 154 SAVLFGILLRPLEE 167 (461)
Q Consensus 154 ~~~i~~~~~~~~~~ 167 (461)
+..+...+.|+.++
T Consensus 173 v~l~~~~~vr~~~~ 186 (250)
T PF06813_consen 173 VCLVAMFFVRPVPP 186 (250)
T ss_pred HHHHHhhheeccCC
Confidence 44455566666543
No 168
>KOG2325|consensus
Probab=99.48 E-value=2.1e-13 Score=132.59 Aligned_cols=354 Identities=13% Similarity=0.084 Sum_probs=206.9
Q ss_pred HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCc-ceeeehhhHHHHHHHHHh-hc---cc-chhhHHHHhhcccccc
Q psy15069 17 VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGC-RNVTICGAILGSACLAVS-VF---AK-NVITLCITIGFGTGLG 90 (461)
Q Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~-r~~~~~g~~~~~~~~~l~-~~---~~-~~~~l~i~~~~l~G~g 90 (461)
|.+.+.+-.|++.++..++..+++|++|.+..|.+. |+-+++|.+++.++.++. ++ .+ .-|.+++ .|++.|+|
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~-~R~l~Gvg 143 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLV-ARILTGVG 143 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHH-HHHHcCcC
Confidence 377788889999999999999999999999999997 888999999999999875 22 33 3455555 49999999
Q ss_pred ccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhh--c-----------hhHHHHHHHHHHHHHHH
Q psy15069 91 FGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY--G-----------WKITLLVLSVTVLSAVL 157 (461)
Q Consensus 91 ~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~--g-----------w~~~f~i~~~~~l~~~i 157 (461)
.+.....-..+.....+++|.+|++....+..+|.++||.+...+..-. | +..+-|+..++.++..+
T Consensus 144 ~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 144 VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 8876555444444455889999999988888899888888887765411 1 23344666666666655
Q ss_pred HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcc
Q psy15069 158 FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTE 237 (461)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (461)
...+..++.+....++...+. +++ ++++++
T Consensus 224 ~i~~~f~E~~~~~~~~~~~~~-~~~-------------------------------------------------~~~~~~ 253 (488)
T KOG2325|consen 224 IILFFFKEVYRGIIDKKKRSV-EEE-------------------------------------------------KSDIEK 253 (488)
T ss_pred HHHhheeecccCccccccccc-hhh-------------------------------------------------ccchhh
Confidence 544444333222211100000 000 000000
Q ss_pred cccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHH----HHHHhhh
Q psy15069 238 DKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSL----ISIVGAA 312 (461)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~----~~~~~~~ 312 (461)
. + . +-+..+..+...+..+...+.+....+..+... ..++++.+++... .++.++.
T Consensus 254 ~----------~-~--------~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~l 314 (488)
T KOG2325|consen 254 V----------K-K--------PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGIL 314 (488)
T ss_pred h----------c-c--------CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHH
Confidence 0 0 0 011122233444445555555544444444433 5666665554443 3333333
Q ss_pred hhhhhhhhhhcc-CCCCcchhHHHHHHHHHHH--HHHHHhhhhhh----------------H-----------HH-HHHH
Q psy15069 313 NMVSRVILGYIS-DRPCVNRLYIYNGCLAICG--AATVICAFCYN----------------Y-----------VE-LAIY 361 (461)
Q Consensus 313 ~~~g~~~~g~l~-dr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------------~-----------~~-~~~~ 361 (461)
..+-.+..+... -++..|+...+........ +.+..+.+... + +. ++..
T Consensus 315 s~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~ 394 (488)
T KOG2325|consen 315 SVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISF 394 (488)
T ss_pred HHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeeh
Confidence 333333333322 1111222222221111111 11111111110 0 01 1122
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
.+++|.+.-.......++-++..++++.++..|.+......+..+||.+...++...| +++...+.+...++...++..
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~~~ 473 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALWIV 473 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHHHH
Confidence 3445555544555566778999999999999999999999999999999888888775 777777766666665555443
No 169
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.48 E-value=3.8e-13 Score=133.27 Aligned_cols=163 Identities=17% Similarity=0.140 Sum_probs=136.2
Q ss_pred HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069 274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY 353 (461)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (461)
.++..........-+|.+.++++.+..+.++..+.+.++..+++++.|+++||+|+|+..+ .+..+.+++.++..+.+
T Consensus 25 ~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~--~~~~~~~~~~~~~~~a~ 102 (413)
T PRK15403 25 DFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLI--TGALIFTLACAATLFTT 102 (413)
T ss_pred HHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHH--HHHHHHHHHHHHHHHcC
Confidence 3334445566667777877999999999999999999999999999999999987666443 45666667777777888
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHH
Q psy15069 354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIF 433 (461)
Q Consensus 354 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l 433 (461)
+.+.+++.+++.|++.+...+....++.|.+|++++++++++.+....++..+||.+++.+.+.. +|++.|++.+++.+
T Consensus 103 ~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~ 181 (413)
T PRK15403 103 SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVMGL 181 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHH
Confidence 99999999999999888766777788899999999999999999999999999999999998875 59999999888877
Q ss_pred HHHHHH
Q psy15069 434 VSGVML 439 (461)
Q Consensus 434 ~~~~~~ 439 (461)
++.+..
T Consensus 182 i~~~~~ 187 (413)
T PRK15403 182 IAFVGL 187 (413)
T ss_pred HHHHHH
Confidence 766543
No 170
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.48 E-value=2.2e-13 Score=132.49 Aligned_cols=157 Identities=13% Similarity=0.026 Sum_probs=123.2
Q ss_pred cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069 281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI 360 (461)
Q Consensus 281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (461)
...+...+|.+.+++|+|..+.+++.+.+.++..++++..|+++||+|+|+. + ..++.....+.......++++.+++
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~ 84 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF-L-FGSLATFAAAAGRLLDPFNYEWLLA 84 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH-H-HHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3455667888889999999999999999999999999999999999874443 2 2233222222222222358889999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 361 YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 361 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.+++.|++.+.. ......+.|.+|+++|+++.++.+....+|..+++.+++++.+.. +|+..|++.+++.++..++++
T Consensus 85 ~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 85 CQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHHHH
Confidence 999999998864 444455689999999999999999999999999999999998876 599999998888776655544
Q ss_pred H
Q psy15069 441 V 441 (461)
Q Consensus 441 ~ 441 (461)
.
T Consensus 163 ~ 163 (368)
T TIGR00903 163 A 163 (368)
T ss_pred H
Confidence 3
No 171
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.47 E-value=2.3e-13 Score=133.54 Aligned_cols=163 Identities=11% Similarity=0.060 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH-
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA- 345 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~- 345 (461)
.+.+.+.+++.+.++....+++|.|++++|+|..+++++.+...+...+++++.|+++||++++.... ........+.
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~l~~ 84 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIAL-RLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH-HHHHHHHHHHH
Confidence 34466777777787888889999999999999999999999999999999999999999975422111 1111111111
Q ss_pred HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHH
Q psy15069 346 TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAF 425 (461)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f 425 (461)
.......++++.+++...+.+.+.+...|...++..+. .+++++++|......++|.+++|.++|.+.++.| |+..|
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f 161 (382)
T TIGR00902 85 AAFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNIL 161 (382)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHH
Confidence 12233567888888888888888887788877776654 4778999999999999999999999999999875 99998
Q ss_pred HHHhHHHH
Q psy15069 426 FLAGGAIF 433 (461)
Q Consensus 426 ~~~~~~~l 433 (461)
++.+.+.+
T Consensus 162 ~~~~~~~~ 169 (382)
T TIGR00902 162 AILTAGLA 169 (382)
T ss_pred HHHHHHHH
Confidence 88765533
No 172
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.47 E-value=6.2e-13 Score=131.44 Aligned_cols=164 Identities=14% Similarity=0.112 Sum_probs=127.5
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 344 (461)
+.+....++.++...+.+....+++.+++++|.+..+.+++.+.+.++..+++++.|++.||+++||... .+..+.++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~--~~~~~~~~ 90 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM--IGLLLWCV 90 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH--HHHHHHHH
Confidence 3466677777777777777788899999999999999999999999999999999999999977666544 34444444
Q ss_pred HHHHh---hhh-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhh-hhccceeeeeecccC
Q psy15069 345 ATVIC---AFC-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIAS-LVGPPIAGFLYDSTL 419 (461)
Q Consensus 345 ~~~~~---~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~~gp~i~g~l~~~~g 419 (461)
+.+.. ... ++.+.+++..++.|++.+...+.....+.+.+|+++|+++.|+.+...++|. .++|.+++++.+..|
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 91 GHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred HHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 33322 232 4677777788889998887777777788899999999999999999999996 589999999998775
Q ss_pred CchHHHHHHhHH
Q psy15069 420 SYSPAFFLAGGA 431 (461)
Q Consensus 420 ~~~~~f~~~~~~ 431 (461)
|+..++.....
T Consensus 171 -~~~~~~~~~~~ 181 (402)
T TIGR00897 171 -EMNTLWSALAF 181 (402)
T ss_pred -hHHHHHHHHHH
Confidence 54444443333
No 173
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.47 E-value=5e-13 Score=131.12 Aligned_cols=153 Identities=12% Similarity=0.076 Sum_probs=133.1
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG 343 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 343 (461)
++.++.+++..++.........+.+|.+.+++|.|..+.|++.+...++..+++++.|+++||+|+|+.. ..+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~--~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY--YLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--HHHHHHHH
Confidence 4457888888888889999999999999999999999999999999999999999999999996655544 34566666
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069 344 AATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418 (461)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~ 418 (461)
+..+...+.++++.+++.+++.|++.+...+.....+.+..++++|+++++..+...++|..+||.+.+.+.+..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 666667778899999999999999999888887777788888899999999999999999999999999988753
No 174
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.46 E-value=6.4e-14 Score=116.22 Aligned_cols=135 Identities=21% Similarity=0.371 Sum_probs=118.2
Q ss_pred HHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhhh-
Q psy15069 29 ASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFE- 107 (461)
Q Consensus 29 ~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~- 107 (461)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+++. +++.|++.+...+.....+.+.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIA-RFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHH-HHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 344567778899999999999999999999999999999988888999888875 799999999888888888899885
Q ss_pred ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 108 RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 108 ~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
++|++++++......+|..++|.+.+.+.+..||++.+++.++..++..+..+++.|
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 789999999999999999999999999999899999999988887777666655543
No 175
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=6.7e-13 Score=128.09 Aligned_cols=172 Identities=19% Similarity=0.270 Sum_probs=148.0
Q ss_pred HHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV 347 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 347 (461)
+.+.+..+......+......|.+.++.|.+..+.++..+...++..++.++.|+++||+++|+ .+..+..+..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~--~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR--VLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch--hhHHHHHHHHHHHH
Confidence 3456667777888888889999999999999999999999999999999999999999977655 34456666677777
Q ss_pred HhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHH
Q psy15069 348 ICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFL 427 (461)
Q Consensus 348 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~ 427 (461)
...+.++.+.+++..++.|++.+...+....++.|.+|+++|++..++.+....+|..++|.+++.+.+..+ |+..+++
T Consensus 80 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 158 (352)
T cd06174 80 LLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLI 158 (352)
T ss_pred HHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHH
Confidence 777778888999999999999999999999999999999999999999999999999999999999999864 9999988
Q ss_pred HhHHHHHHHHHHHHH
Q psy15069 428 AGGAIFVSGVMLFVI 442 (461)
Q Consensus 428 ~~~~~l~~~~~~~~~ 442 (461)
.++..++..+..+..
T Consensus 159 ~~~~~~~~~~~~~~~ 173 (352)
T cd06174 159 LAILGLLLALLLLFL 173 (352)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888777766555443
No 176
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.46 E-value=2.7e-13 Score=134.86 Aligned_cols=180 Identities=16% Similarity=0.218 Sum_probs=123.2
Q ss_pred ccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q psy15069 260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGC 338 (461)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~ 338 (461)
..+++|.+|.+.+..++..++.+.+.+++|.|+ +++|+++.+.|++.+...++..+++++.|+++||+|+|+..+....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 457889999999999999988888999999999 5599999999999999999999999999999999887665543222
Q ss_pred HHHHHHH-HHHhhhhh----hH-HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee
Q psy15069 339 LAICGAA-TVICAFCY----NY-VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG 412 (461)
Q Consensus 339 ~~~~~~~-~~~~~~~~----~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g 412 (461)
....+.. .......+ .. ....+..+..|.+.....+....+..+ . .++++..+|......++|..++|.++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g 162 (420)
T PRK09528 85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHH
Confidence 2221111 11111111 01 011111222333322223333333222 2 245677889999999999999999999
Q ss_pred eeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 413 FLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 413 ~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
.+.+. +|+..|++.+++.++..++.+..+
T Consensus 163 ~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 163 ILFNI--NPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHHhc--CchHhHHHHHHHHHHHHHHHhccc
Confidence 99885 588899888877777666655543
No 177
>KOG3764|consensus
Probab=99.45 E-value=3e-13 Score=125.76 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=133.8
Q ss_pred HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069 293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY 372 (461)
Q Consensus 293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 372 (461)
++.+-+.++.|++++...+.+++.+++.|.+.||+|+ +..+.+++.++....+++.+.++++.+++++.+.|++.++.
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy--~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGY--KIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhcc--ccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHH
Confidence 4456678899999999999999999999999999654 45556788888888899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccc-hhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069 373 VGLTSVILVDLLGLDR-LTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 373 ~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~ 445 (461)
.....++++|.+|+++ |++++|+.-.+.++|..+||+.+|.+||..| ++..|++.++++++-..+.+++-+.
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999999999999765 6999999999999999999999999999876 9999999999999988876665443
No 178
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.45 E-value=1.3e-13 Score=139.04 Aligned_cols=149 Identities=13% Similarity=0.153 Sum_probs=124.3
Q ss_pred HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHhhhhhh
Q psy15069 294 QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--CYNYVELAIYAGVFGAMIGA 371 (461)
Q Consensus 294 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~ 371 (461)
+++++..+.|.+.+.+.++..+++++.|+++||+++|+... .+.++.++..++.++ ..+.+.+++.+++.|++.+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~--~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~ 147 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIG--IGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGS 147 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhH--HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhccc
Confidence 67899999999999999999999999999999987665443 444455555444433 34567788889999999999
Q ss_pred HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
..+....++.|++|+++|+++.|+.+....+|.+++|.+.+.+.+...+|+..|++.+++.++..++++...+
T Consensus 148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999987435999999998888777766655543
No 179
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=1e-12 Score=131.79 Aligned_cols=158 Identities=16% Similarity=0.160 Sum_probs=128.6
Q ss_pred ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069 282 NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY 361 (461)
Q Consensus 282 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (461)
+.+..++|.+.+++|.+.++.++..+...+...++.++.|+++||+++|+.+ ..+.++.++..++..+.++.+.+++.
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV--IAGGLLASLGMILASFSSNVIELYLT 113 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH--HhhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4566678888899999999999999999999999999999999998766543 35555666666777777787777654
Q ss_pred -HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 362 -AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 362 -~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.++.|++.+...+....++.++++ ++|+++.|+.+....+|..++|.+.|.+.+.. +|++.|++.+++.+++.+..+
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~~v~~~ 191 (455)
T TIGR00892 114 AGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHCCVCGA 191 (455)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHH
Confidence 477898888766666777888886 78999999999999999999999999999987 499999999988776665554
Q ss_pred HHH
Q psy15069 441 VIP 443 (461)
Q Consensus 441 ~~~ 443 (461)
+.+
T Consensus 192 ~~~ 194 (455)
T TIGR00892 192 LMR 194 (455)
T ss_pred HhC
Confidence 443
No 180
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.44 E-value=8.8e-13 Score=130.35 Aligned_cols=170 Identities=15% Similarity=0.135 Sum_probs=132.4
Q ss_pred HHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-----CcchhHHHHHHHHHHHHH
Q psy15069 271 TISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-----CVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~ 345 (461)
...++.+..........+|.|+++.|+|.+++|++...... .+.++++|+++||+ |+||+++. .+.+..+++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~-~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLL-LTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHH-HHHHHHHHH
Confidence 44566677777778889999999999999999998666554 68999999999998 55554443 444444444
Q ss_pred HHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069 346 TVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS 422 (461)
Q Consensus 346 ~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~ 422 (461)
...+.+. .+.+.+.+..++.+++.+...+...+++.|++|+++|+++.++......+|..+++.+.+.+.+...+|+
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 4444444 3466666666777888888899999999999999999999999999999999999999999988644699
Q ss_pred HHHHHHhHHHHHHHHHHHHHH
Q psy15069 423 PAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 423 ~~f~~~~~~~l~~~~~~~~~~ 443 (461)
..|++.+++.++..+..+..+
T Consensus 162 ~~f~i~a~~~l~~~l~~~~~~ 182 (402)
T PRK11902 162 NTYLLMAGLMLAGALTTLWAP 182 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 999998887776655444443
No 181
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.44 E-value=5e-13 Score=131.18 Aligned_cols=160 Identities=13% Similarity=0.099 Sum_probs=122.8
Q ss_pred HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhH--HHHHHHHHHHHHHHHhhh
Q psy15069 274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLY--IYNGCLAICGAATVICAF 351 (461)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~~~~~~ 351 (461)
+++...+...+.+++|.|+++.|.|..++|++.+...+...++.++.|++.||+++++.. .......+ ........
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHh
Confidence 555566677888999999999999999999999999999999999999999997653211 11111111 12222233
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069 352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA 431 (461)
Q Consensus 352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~ 431 (461)
.++.|.+++..++.|++.+...+...++..+. .++++++++.......+|..+||.++|++.++.| |+..|++.++.
T Consensus 91 ~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~~~ 167 (382)
T PRK11128 91 AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILTAG 167 (382)
T ss_pred cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHHHH
Confidence 56788888888888988888888777776665 3567889999999999999999999999999875 99999887765
Q ss_pred HHHHHHH
Q psy15069 432 IFVSGVM 438 (461)
Q Consensus 432 ~l~~~~~ 438 (461)
.++..+.
T Consensus 168 ~~~~~~~ 174 (382)
T PRK11128 168 VASMLLG 174 (382)
T ss_pred HHHHHHH
Confidence 5554443
No 182
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.43 E-value=2.1e-12 Score=125.10 Aligned_cols=161 Identities=9% Similarity=0.018 Sum_probs=133.7
Q ss_pred cchhhHhhHHHHhCCCchh-hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q psy15069 283 VPYVYIVKLAEQRGVTRSN-ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIY 361 (461)
Q Consensus 283 ~~~~~~~~~~~~~g~s~~~-~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (461)
......|.+.+++|++.++ .+.+.+.+..++.+..++.|+++||+|.|+ ++..+++..++..++.+++++.+.+.+.
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~--vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~ 121 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP--VLVLQALSFVCVWLLLLLGTSVWHMQLM 121 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556555899999999 999999999999999999999999965554 4556777888888888889999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC--CchHHHHHHhHHHHHHHHHH
Q psy15069 362 AGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL--SYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 362 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g--~~~~~f~~~~~~~l~~~~~~ 439 (461)
.+++|++.++.. ....++.+++|+++|+++.|+.+....+|.++++++++++. ..| +|....++......++.+..
T Consensus 122 R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a 199 (511)
T TIGR00806 122 EVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLA 199 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 88899999999999999999999999999999999999844 444 23445555566666777777
Q ss_pred HHHHHhhH
Q psy15069 440 FVIPSLQS 447 (461)
Q Consensus 440 ~~~~~~~~ 447 (461)
+++|..+|
T Consensus 200 ~~LP~~~~ 207 (511)
T TIGR00806 200 LFLKRPKR 207 (511)
T ss_pred HhCCCCch
Confidence 77775544
No 183
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.43 E-value=1.3e-12 Score=128.84 Aligned_cols=175 Identities=14% Similarity=0.214 Sum_probs=128.6
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 342 (461)
||.+|.+...+++.+.+...+.+++|.|+ +++|+++.+.+++.+...++..+++++.|+++||+|+|+..+........
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV 80 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 57789999999999999999999999998 56899999999999999999999999999999998766655432222111
Q ss_pred H-HHHHHhhhhh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069 343 G-AATVICAFCY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 343 ~-~~~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
+ .......+.+ ..+...+..++.|++.+...+....+..+..+ +++..+|......++|..+||.++|.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 158 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS 158 (396)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc
Confidence 1 1111111111 12223444566777777777777666666433 34567788888889999999999998877
Q ss_pred ccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 417 STLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 417 ~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
. +|+..|++.+++.++..+..+..
T Consensus 159 ~--~~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 159 I--DPQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred c--CchHHHHHHHHHHHHHHHHHHHh
Confidence 5 59999999888877776655543
No 184
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.43 E-value=2.2e-12 Score=127.13 Aligned_cols=175 Identities=17% Similarity=0.151 Sum_probs=128.4
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNRLYIYNGCLAI 341 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~ 341 (461)
|.+.+.+++..++...+...+.+.+|.++ +++|.+.++.|++.+...+ +.+++.+.+++ .||+++||..+. .+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~-~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIV-FCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHH-HHHHH
Confidence 55678888888988999888899999988 7889999999999876655 55555555666 999887665443 23334
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccch--hHHHHHHHHHHHhhhhhccceeeeeecccC
Q psy15069 342 CGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRL--TNAFGLLLLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
.++...+..+.++++.+.+...+.+...+...|....+..+..++++| +...++.+....+|.++||++++.+.++.|
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g 171 (393)
T PRK15011 92 GVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS 171 (393)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC
Confidence 444455556677777765555555555556677777777777665544 334578888899999999999999999874
Q ss_pred CchHHHHHHhHHHHHHHHHHHH
Q psy15069 420 SYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 420 ~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
|+..|++.++..++.++..+.
T Consensus 172 -w~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 172 -FTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred -hHHHHHHHHHHHHHHHHHHHh
Confidence 999999988877766655443
No 185
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.42 E-value=4.5e-11 Score=114.45 Aligned_cols=360 Identities=13% Similarity=0.063 Sum_probs=232.8
Q ss_pred eehHHHHhH-hcCCCccHH-HHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcc
Q psy15069 9 ILFIEFTKV-FQEGDGVTS-WIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFG 86 (461)
Q Consensus 9 ~~~~~~~~~-~~~~~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l 86 (461)
.+.|++.+. .|++..++. -++-+..=.+....++...+.|..+.|++++++.+...+...+.-+.++++.+-+. -+.
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~-q~~ 103 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLM-QFF 103 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHH-HHH
Confidence 344555554 677777754 56666677777888899999999999999999999999999999999999999885 688
Q ss_pred ccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcc
Q psy15069 87 TGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 87 ~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
.|++.+. .++-.+++-... +++-.++.+...+..-+|-+++..++..++..-+. +....+.-+...+..++ .+++
T Consensus 104 yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~-~~fL 181 (412)
T PF01770_consen 104 YGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLI-ALFL 181 (412)
T ss_pred HHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHc
Confidence 9988776 333334444444 57778899999999999999999999988874443 33333332222233333 3444
Q ss_pred cCCCCCC-CCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCccccccc
Q psy15069 164 PLEEQPV-EEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTC 242 (461)
Q Consensus 164 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (461)
|.+++.. .++...+... .++.+. ++.++.++ ++....++++.
T Consensus 182 P~~~~S~~f~r~~~~~~~-----~~~~~~------------------------~~~~~~~~----~~~~~~~~~~~---- 224 (412)
T PF01770_consen 182 PMPKRSLFFHRKPPAEQD-----ANESES------------------------DKMNESPE----SSSSTEKSPST---- 224 (412)
T ss_pred CCCCcccceeccCccccc-----cccccc------------------------cccccccc----cccccccCccc----
Confidence 5443222 1111100000 000000 00000000 00000000000
Q ss_pred ccCCchhhhhHhhhh--ccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHh---CCCchhhHHHHHHHhhhhhhhh
Q psy15069 243 LNLSDDTKQTLREML--DMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQR---GVTRSNASSLISIVGAANMVSR 317 (461)
Q Consensus 243 ~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~~g~ 317 (461)
.....+...+.+. .++..++|.++...+-..+...+++.+..|.....++. +-...--|.+-+...+.+.++.
T Consensus 225 --~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~a 302 (412)
T PF01770_consen 225 --ESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAA 302 (412)
T ss_pred --ccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHH
Confidence 0011111111111 12457888888888888888888888888887777666 3334445677778888888899
Q ss_pred hhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHH
Q psy15069 318 VILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLL 397 (461)
Q Consensus 318 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 397 (461)
+..|++..++.+-....+....++.+.+++++.+.++.|..++..++++..+....+....-++.....+..|...|++.
T Consensus 303 l~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 303 LLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHH
Confidence 99999966644444556566666777778888889999999999999998888888888888888888899999999988
Q ss_pred HHHHhhhhhccce
Q psy15069 398 LFQGIASLVGPPI 410 (461)
Q Consensus 398 ~~~~~g~~~gp~i 410 (461)
+...+-..+-..+
T Consensus 383 f~Al~LQtilT~i 395 (412)
T PF01770_consen 383 FVALVLQTILTLI 395 (412)
T ss_pred HHHHHHHHheEEE
Confidence 8766655444433
No 186
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.42 E-value=8.8e-12 Score=116.08 Aligned_cols=236 Identities=14% Similarity=0.122 Sum_probs=162.5
Q ss_pred HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccc
Q psy15069 13 EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFG 92 (461)
Q Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~ 92 (461)
.+-+++|.+..+++.++........+.+++.|.+.||+|||+..++-+++.+++++.. ..++++.+++. |++.|++.+
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~~~~~L~~G-RvlgGiaTS 136 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSSNYPVLLLG-RVLGGIATS 136 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hccccHHHHHH-HHHHHHHHH
Confidence 3456799999999999999999999999999999999999999999999999999754 45889999986 999999998
Q ss_pred ccchhHHHH-HHhhhhc-----cchhhhhhhc-cchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcc
Q psy15069 93 LIYLPAIVS-VTCYFER-----LRSLATGIAV-CGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 93 ~~~~~~~~~-~~~~f~~-----~rg~a~gi~~-~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
..+.+--++ +.|+.++ ..+.-.+... .++++-.++...++..+.+..|. ..+|....++.++..++....+
T Consensus 137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W 216 (354)
T PF05631_consen 137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTW 216 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcc
Confidence 887766553 3444311 1222233233 34556667777888888877665 7788877777666655544333
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccc
Q psy15069 164 PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCL 243 (461)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
++...+. .++ .+.
T Consensus 217 ~ENyg~~--~~~----------------------------------------------------------~~~------- 229 (354)
T PF05631_consen 217 PENYGDT--SSS----------------------------------------------------------SSL------- 229 (354)
T ss_pred cccCCCc--ccc----------------------------------------------------------cch-------
Confidence 3211000 000 000
Q ss_pred cCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchh-hHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhh
Q psy15069 244 NLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYV-YIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGY 322 (461)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~ 322 (461)
.++.++..+ .+.+||+++.+.+...+.....|.+.. |.|..- ..+ ..-..|++++.+..+.++|+.+..+
T Consensus 230 --~~~~~~a~~-----~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~~~-~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 230 --SGSFREAWR-----AILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-PDD-EELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred --HHHHHHHHH-----HHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-CCC-CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 011112222 356789999888888777777766554 566554 111 2244889999999999999999987
Q ss_pred ccCC
Q psy15069 323 ISDR 326 (461)
Q Consensus 323 l~dr 326 (461)
+..+
T Consensus 301 l~s~ 304 (354)
T PF05631_consen 301 LLSK 304 (354)
T ss_pred HHhC
Confidence 7665
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.41 E-value=3.4e-12 Score=128.59 Aligned_cols=182 Identities=19% Similarity=0.174 Sum_probs=147.9
Q ss_pred ccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069 260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL 339 (461)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~ 339 (461)
..+|+|.|..++++.++.+++........+-++.+..-|+...+++.....+..++.++++|.++||+++||.++..-..
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~ 84 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL 84 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 45899999999999999999998888888888877788899999999999999999999999999998666654432222
Q ss_pred HHH-HHHHHHhhh--hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069 340 AIC-GAATVICAF--CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 340 ~~~-~~~~~~~~~--~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
... .+.+.++.. ..+.|.+++..++.|++.+...|...+++.+++|+++...+.++.+...++..++||.++|.++.
T Consensus 85 ~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva 164 (524)
T PF05977_consen 85 RALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVA 164 (524)
T ss_pred HHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 111 111111112 23678888899999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 417 STLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 417 ~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
..| ....|.+.++..++..+.....
T Consensus 165 ~~G-~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 165 FFG-AAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 875 7788888888777665544443
No 188
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.41 E-value=1.5e-12 Score=130.62 Aligned_cols=153 Identities=14% Similarity=0.085 Sum_probs=115.2
Q ss_pred cchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh----hhHHHH
Q psy15069 283 VPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC----YNYVEL 358 (461)
Q Consensus 283 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 358 (461)
.+...+|.+.++ |++..+.++..+...++..+++++.|+++||+|+|+.. ..+.++.++..++..+. .+.+.+
T Consensus 47 ~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l--~~~~~~~~i~~~~~~~~~~~~~~~~~~ 123 (452)
T PRK11273 47 NFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL--PAGLILAAAVMLFMGFVPWATSSIAVM 123 (452)
T ss_pred HHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH--HHHHHHHHHHHHHHHhhhcccccHHHH
Confidence 344566765566 99999999999999999999999999999998766543 34555555555555443 356677
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhh-ccceeeeeecccCCchHHHHHHhHHHHHHHH
Q psy15069 359 AIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLV-GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV 437 (461)
Q Consensus 359 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~ 437 (461)
++..++.|++.+...+.....+.+++|+++|++++|+.+....+|+.+ +|.+...+.. ..+|+..|++.+++.++..+
T Consensus 124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-~~gw~~~f~i~~~~~~~~~~ 202 (452)
T PRK11273 124 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW-FNDWHAALYMPAFAAILVAL 202 (452)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHH
Confidence 777889999988888877778899999999999999999999988754 4543322322 23699999998877666554
Q ss_pred HH
Q psy15069 438 ML 439 (461)
Q Consensus 438 ~~ 439 (461)
+.
T Consensus 203 l~ 204 (452)
T PRK11273 203 FA 204 (452)
T ss_pred HH
Confidence 43
No 189
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.39 E-value=3.6e-12 Score=128.95 Aligned_cols=179 Identities=16% Similarity=0.140 Sum_probs=140.4
Q ss_pred ccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-----CcchhHHHH
Q psy15069 262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-----CVNRLYIYN 336 (461)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~ 336 (461)
.++|+.+.+++.++.+..........+|.++++.|.+.++.+.. +...... ++++++|+++||+ |+||.++.
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll- 85 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLL- 85 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHH-
Confidence 45667777777778888888888889999999999999999986 3333333 5899999999998 76665543
Q ss_pred HHHHHHHHHHHHhhhh---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee
Q psy15069 337 GCLAICGAATVICAFC---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF 413 (461)
Q Consensus 337 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~ 413 (461)
.+.+..+++...+.+. ++.+.+.+..++.+++.+...+...++..|++|+++|+++.++......+|..+++.+.++
T Consensus 86 ~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~ 165 (491)
T PRK11010 86 ATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALW 165 (491)
T ss_pred HHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444333 3677777788889999999999999999999999999999999999999999999999999
Q ss_pred eecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 414 LYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 414 l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
+.+...+|+..|++.+++.++..+..+..+
T Consensus 166 l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~ 195 (491)
T PRK11010 166 LADRYLGWQGMYWLMAALLIPCIIATLLAP 195 (491)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998434699999999888777766555443
No 190
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.39 E-value=2.1e-12 Score=130.18 Aligned_cols=165 Identities=15% Similarity=0.057 Sum_probs=125.9
Q ss_pred HHhhccccchhhHhhHHHHhCCC--------chhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHH
Q psy15069 276 FTSIGFNVPYVYIVKLAEQRGVT--------RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATV 347 (461)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~g~s--------~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 347 (461)
+...........+|....+.+.+ ..+.+++.+.+.++..+++++.|+++||+|+|+.++ .+.++..++.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~--~~~~~~~~~~~ 116 (481)
T TIGR00879 39 MFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL--IIALLFVIGAI 116 (481)
T ss_pred hcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH--HHHHHHHHHHH
Confidence 33344444555666666666665 899999999999999999999999999977655443 34444444444
Q ss_pred Hhhh---hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee---eeeecccCCc
Q psy15069 348 ICAF---CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA---GFLYDSTLSY 421 (461)
Q Consensus 348 ~~~~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~---g~l~~~~g~~ 421 (461)
+..+ ..+.+.+++..++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+. +.+.+.. +|
T Consensus 117 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~w 195 (481)
T TIGR00879 117 LMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL-GW 195 (481)
T ss_pred HHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc-cH
Confidence 4433 234557888899999999999999999999999999999999999999999999999998 6665654 59
Q ss_pred hHHHHHHhHHHHHHHHHHHHHH
Q psy15069 422 SPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 422 ~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
++.|++.+...++..+..++++
T Consensus 196 ~~~f~~~~~~~~~~~~~~~~l~ 217 (481)
T TIGR00879 196 RIPLGLQLIPAGLLFLGLFFLP 217 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC
Confidence 9999997666666555554443
No 191
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.38 E-value=2.5e-12 Score=127.56 Aligned_cols=157 Identities=13% Similarity=0.170 Sum_probs=128.4
Q ss_pred eehHHHHhHhcCCC--------ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhccc-c---h
Q psy15069 9 ILFIEFTKVFQEGD--------GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAK-N---V 76 (461)
Q Consensus 9 ~~~~~~~~~~~~~~--------~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~-~---~ 76 (461)
.+.|.+.++.|.+. .+.+.+.++..+...++.++.|++.||+|+|+++..+.++.+++..+..... + +
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44566777777553 6679999999999999999999999999999999999999999877666532 2 3
Q ss_pred hhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhc-cchhhhHHHHhHHHHHHHHh------hchhHHHHHH
Q psy15069 77 ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAV-CGSGLGTIIFAPIIDYTVRE------YGWKITLLVL 148 (461)
Q Consensus 77 ~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~-~~~~lg~~i~~~l~~~l~~~------~gw~~~f~i~ 148 (461)
+.+++ .+++.|++.+...+.....+.+++| ++|++++|+.+ ...++|.+++|++++.+.+. +||+..|.+.
T Consensus 309 ~~l~l-~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~ 387 (418)
T TIGR00889 309 ALLFL-SMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFF 387 (418)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 44454 3688999988888888888899996 78999999997 67899999999999999987 4699999999
Q ss_pred HHHHHHHHHHHhhcccCC
Q psy15069 149 SVTVLSAVLFGILLRPLE 166 (461)
Q Consensus 149 ~~~~l~~~i~~~~~~~~~ 166 (461)
+++.++..++.+++.+++
T Consensus 388 ~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 388 AGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHhCCc
Confidence 988888777766665543
No 192
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.37 E-value=5.2e-12 Score=124.81 Aligned_cols=172 Identities=12% Similarity=0.101 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 345 (461)
.++.+++.++...+........+|.+.+++|++..+.+++.+...++.+++++..|++.||+|+|+..+ .++++.+++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~--~g~~l~~~g 81 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGIL--LGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHH--HHHHHHHHH
Confidence 356667777777777777778889999999999999999999999999999999999999987666554 444455555
Q ss_pred HHHhh---hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc----
Q psy15069 346 TVICA---FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST---- 418 (461)
Q Consensus 346 ~~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~---- 418 (461)
.+++. ..++++.+.+..++.|++.+...+....++.+..|++++++..++.+...++|..+||.+.+.+....
T Consensus 82 ~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~ 161 (410)
T TIGR00885 82 AFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQ 161 (410)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 44432 23578888888999999999999998889999999999999999999999999999999988774221
Q ss_pred ---------------------CCchHHHHHHhHHHHHHHHHH
Q psy15069 419 ---------------------LSYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 419 ---------------------g~~~~~f~~~~~~~l~~~~~~ 439 (461)
.+|+.+|++.+++.++..++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 162 SQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 248899988888766655444
No 193
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.37 E-value=5.8e-12 Score=127.52 Aligned_cols=175 Identities=12% Similarity=0.073 Sum_probs=128.3
Q ss_pred HHHHHHHHHHhhccccchhhHhhHHHHh--------CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLAEQR--------GVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL 339 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~ 339 (461)
+...++.+........+....|.+.+++ +.+..+.+++.+.+.++.+++.+++|+++||+|+|+.++. +.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~--~~ 92 (479)
T PRK10077 15 LVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI--AA 92 (479)
T ss_pred HHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH--HH
Confidence 3344444444455555555556555554 8889999999999999999999999999999877665543 33
Q ss_pred HHHHHHHHHhhh------------hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhc
Q psy15069 340 AICGAATVICAF------------CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVG 407 (461)
Q Consensus 340 ~~~~~~~~~~~~------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g 407 (461)
++..++.+...+ .+..+.+++.+++.|++.|...+...+++.|++|+++|+++.++......+|..++
T Consensus 93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 333333333322 12245667889999999999999999999999999999999999999999998888
Q ss_pred cceeeeee--------cccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069 408 PPIAGFLY--------DSTLSYSPAFFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 408 p~i~g~l~--------~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~ 445 (461)
+.+++.+. +.. +|++.|++.++..++..+..+++++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~~~l~~s 217 (479)
T PRK10077 173 YFVNYFIARSGDASWLNTD-GWRYMFASEAIPALLFLMLLYFVPET 217 (479)
T ss_pred HHHHHHHhccCcccccccC-ChHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 76654332 233 59999998887777766656555543
No 194
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.37 E-value=8.1e-12 Score=123.01 Aligned_cols=176 Identities=11% Similarity=0.009 Sum_probs=127.3
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 342 (461)
+|.+++..++.+......+.+....+.+-+ ++|+|.+|.+++.++..+++.++++..|++.||+|.|+... .+.++.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~--~~~ll~ 110 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTV--FSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH--HHHHHH
Confidence 456666666666655655566666666654 79999999999999999999999999999999987666544 445555
Q ss_pred HHHHHHhhhh-----hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee----
Q psy15069 343 GAATVICAFC-----YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF---- 413 (461)
Q Consensus 343 ~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~---- 413 (461)
++..+...+. ++++.+++..++.|++ +..++.....+.+++|+++||++.|+....+++|..+++++...
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 6666666655 7899999999999997 77888888899999999999999999966666666544443322
Q ss_pred -eecccC------------CchHHHHHHhHHHHHHHHHHHHH
Q psy15069 414 -LYDSTL------------SYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 414 -l~~~~g------------~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+.+..| +|+.++++...+.++..+..++.
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112111 25666666666666665555443
No 195
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.36 E-value=1.1e-11 Score=125.86 Aligned_cols=169 Identities=11% Similarity=0.045 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchh-hHH-----HHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSN-ASS-----LISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA 340 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-~~~-----~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~ 340 (461)
++...++.++..+.+..+....|...+++..+.++ ..+ ..+...++..+|.+++|+++||+|+|+.+ ..+++
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l--~~~~~ 95 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL--AITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH--HHHHH
Confidence 44556777777777777666777666777533322 122 24566688899999999999997766554 46677
Q ss_pred HHHHHHHHhhhhhhHHH--------HHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee
Q psy15069 341 ICGAATVICAFCYNYVE--------LAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG 412 (461)
Q Consensus 341 ~~~~~~~~~~~~~~~~~--------~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g 412 (461)
+.+++.++..+.++++. +++.+++.|++.|...+....++.|++|+++|+...++......+|..+|+.+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888887653 6788899999999999999999999999999999999998888888777775543
Q ss_pred eee--------cccCCchHHHHHHhHHHHHHHHH
Q psy15069 413 FLY--------DSTLSYSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 413 ~l~--------~~~g~~~~~f~~~~~~~l~~~~~ 438 (461)
.+. +.. +|++.|++.+.+.+++.++
T Consensus 176 ~~~~~~~~~~~~~~-gWR~~f~i~~~~~l~~~~~ 208 (490)
T PRK10642 176 LISTIVGEANFLDW-GWRIPFFIALPLGIIGLYL 208 (490)
T ss_pred HHHHhcCHHHhcCc-cHHHHHHHHHHHHHHHHHH
Confidence 332 233 5999999876655544433
No 196
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.34 E-value=1.1e-11 Score=123.81 Aligned_cols=165 Identities=12% Similarity=0.015 Sum_probs=118.1
Q ss_pred HHHHHHHHHhhccccchhhHhhHHHHhC---CCchhhH---HHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069 269 LFTISNIFTSIGFNVPYVYIVKLAEQRG---VTRSNAS---SLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~---~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 342 (461)
...++.++.......+....|.+.++++ .+..+.+ .+++...++..+|++++|+++||+|+|+.+ ..++++.
T Consensus 26 ~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l--~~~~~~~ 103 (432)
T PRK10406 26 GASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM--LISVCMM 103 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH--HHHHHHH
Confidence 3445566667776666666666667764 4444433 344444555669999999999997766544 4566666
Q ss_pred HHHHHHhhhhhhH--------HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069 343 GAATVICAFCYNY--------VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL 414 (461)
Q Consensus 343 ~~~~~~~~~~~~~--------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l 414 (461)
++..++..+.+++ ..+++.+++.|++.|...+...+++.|.+|+++|+.+.++.......|..+++.+...+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~ 183 (432)
T PRK10406 104 CFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVL 183 (432)
T ss_pred HHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666665554 35778899999999999999999999999999999999998888777777777654433
Q ss_pred e--------cccCCchHHHHHHhHHHHHHH
Q psy15069 415 Y--------DSTLSYSPAFFLAGGAIFVSG 436 (461)
Q Consensus 415 ~--------~~~g~~~~~f~~~~~~~l~~~ 436 (461)
. +.. +|+..|++.++..++..
T Consensus 184 ~~~~~~~~~~~~-gWr~~F~i~~~~~ll~~ 212 (432)
T PRK10406 184 QQTLEDAELREW-GWRIPFALGAVLAVVAL 212 (432)
T ss_pred HHhCCHHHHhcc-chHHHHHHHHHHHHHHH
Confidence 2 133 59999988777665543
No 197
>KOG4332|consensus
Probab=99.33 E-value=1.1e-10 Score=103.01 Aligned_cols=342 Identities=13% Similarity=0.129 Sum_probs=204.0
Q ss_pred HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069 15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI 94 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~ 94 (461)
-..++..++++|.++-+.....++.+.+.|.|+||.|||+..+.=++-..++++- -.++.+..+++. |++.|+..+..
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVG-R~LGGiaTsLL 141 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVG-RVLGGIATSLL 141 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeeh-hhhhhHHHHHH
Confidence 3457888999999999988889999999999999999999877766666666643 356788899986 99999998887
Q ss_pred chhHHHHHHhhhhccchhhhhh--------hccchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcc-
Q psy15069 95 YLPAIVSVTCYFERLRSLATGI--------AVCGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLR- 163 (461)
Q Consensus 95 ~~~~~~~~~~~f~~~rg~a~gi--------~~~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~- 163 (461)
+.+--++...-..++|++---+ ...+.++-.++....+..+.+.++. -.+|-.. .+++.+-....++
T Consensus 142 FSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAA--acfLaigmAvil~~ 219 (454)
T KOG4332|consen 142 FSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAA--ACFLAIGMAVILSS 219 (454)
T ss_pred HHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHH--HHHHHHHHHHHHhh
Confidence 7666553333223445442222 1245666677777888888876644 3344333 3333322222221
Q ss_pred --cCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccc
Q psy15069 164 --PLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTT 241 (461)
Q Consensus 164 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (461)
++...|.| ++.+
T Consensus 220 W~ENygdps~---------------------~kdl--------------------------------------------- 233 (454)
T KOG4332|consen 220 WSENYGDPSE---------------------NKDL--------------------------------------------- 233 (454)
T ss_pred hhhccCChhh---------------------hHHH---------------------------------------------
Confidence 11111110 0000
Q ss_pred cccCCchhhhhHhhhhccccccchhHHHH-HHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhh
Q psy15069 242 CLNLSDDTKQTLREMLDMELLRDPIFILF-TISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVI 319 (461)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~ 319 (461)
..+.+...+ .+..++++.++ .+-..+....+..++.|.|..- ++.+.. -|.+++.+.++.++|+-+
T Consensus 234 ----ltqf~gaa~-----aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSl 301 (454)
T KOG4332|consen 234 ----LTQFKGAAR-----AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSL 301 (454)
T ss_pred ----HHHhhHhHH-----HHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC---chhHHHHHHHHHHHhhHH
Confidence 000111111 23445555443 3334444444444556666654 344433 567888899999999999
Q ss_pred hhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh-------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH
Q psy15069 320 LGYISDRPCVNRLYIYNGCLAICGAATVICAFCY-------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA 392 (461)
Q Consensus 320 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (461)
..++..|-..+-.....+.+++....+.+...+. ++..-.+..+++-.+.|..+|...-+-.+..|++.|++.
T Consensus 302 a~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearsti 381 (454)
T KOG4332|consen 302 ASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTI 381 (454)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhh
Confidence 9999887433333334444444443333222211 334446677788889999999999999999999999988
Q ss_pred HHHHHHHHHhhhhhccceeeeeeccc-CCchHHHHHHhHHHHHHHHHHH
Q psy15069 393 FGLLLLFQGIASLVGPPIAGFLYDST-LSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 393 ~g~~~~~~~~g~~~gp~i~g~l~~~~-g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
+.+...--++...++-..- -.|.. -.-+..|-++.....++.+...
T Consensus 382 mNfFRvPLnifvClvLynl--h~~~~p~~tr~mf~icS~~~~~a~i~~~ 428 (454)
T KOG4332|consen 382 MNFFRVPLNIFVCLVLYNL--HVDAFPTTTRNMFGICSAFLFVASILQR 428 (454)
T ss_pred hhheechhhHhhhhhheec--ccccCccccchhhhhhHHHHHHHHHHHH
Confidence 8876665555444432110 01111 1245667777766666655433
No 198
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.33 E-value=1e-11 Score=126.33 Aligned_cols=177 Identities=14% Similarity=0.152 Sum_probs=128.4
Q ss_pred HHHHHHHHHhhccccchhhHhhHHHH-----hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069 269 LFTISNIFTSIGFNVPYVYIVKLAEQ-----RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG 343 (461)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 343 (461)
+..++.++.......+....|.+-.+ ...+..+.+++.+...++.+++.++.|+++||+|+|+... .++++..
T Consensus 20 ~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~--~~~~~~~ 97 (502)
T TIGR00887 20 IAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG--MELIIMI 97 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH--HHHHHHH
Confidence 34444555555555555555554432 2345567788999999999999999999999976655443 4444555
Q ss_pred HHHHHhhhhhh------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069 344 AATVICAFCYN------YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS 417 (461)
Q Consensus 344 ~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~ 417 (461)
++.++..+.++ .+.+++.+++.|++.+...+..+.++.|.+|+++|+++.++.+....+|..+++.+...+...
T Consensus 98 v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~ 177 (502)
T TIGR00887 98 IATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAG 177 (502)
T ss_pred HHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554444443 567888999999999999999999999999999999999999999999999988886654320
Q ss_pred ----------------------cCCchHHHHHHhHHHHHHHHHHHHHHHhhH
Q psy15069 418 ----------------------TLSYSPAFFLAGGAIFVSGVMLFVIPSLQS 447 (461)
Q Consensus 418 ----------------------~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~ 447 (461)
..+|+..|.+.++..++..+..+.+|+..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 178 FKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPR 229 (502)
T ss_pred hccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 115999998777777666666556655443
No 199
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.32 E-value=6.3e-12 Score=140.54 Aligned_cols=182 Identities=17% Similarity=0.061 Sum_probs=129.0
Q ss_pred cccchhHHHHHHHHHHHhhccccchhhHhh----HH-HHhCCC-chhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH
Q psy15069 261 LLRDPIFILFTISNIFTSIGFNVPYVYIVK----LA-EQRGVT-RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI 334 (461)
Q Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~g~s-~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~ 334 (461)
+++++.+..+++..++..++.+.....++. .+ ++.+.+ ....++..+++.+..++.++++|+++||+++|+.+.
T Consensus 7 l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~ 86 (1140)
T PRK06814 7 LMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAK 86 (1140)
T ss_pred hhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHH
Confidence 567777777777766666654433222221 12 222222 245777888899999999999999999987766432
Q ss_pred HH-HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeee
Q psy15069 335 YN-GCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGF 413 (461)
Q Consensus 335 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~ 413 (461)
.. .+.++.....+.....++++.++++.++.|++.++..|...+++.++++++++++++|+.++..++|.++||.++|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~ 166 (1140)
T PRK06814 87 ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGL 166 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 21 11122222222222347899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 414 LYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 414 l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
+.+.. +|+..|...++..+++.++.+.++
T Consensus 167 l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 167 ATISG-NFVILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred HHhcc-ccHHHHHHHHHHHHHHHHHHhhCC
Confidence 99976 588888555555555544444443
No 200
>TIGR00898 2A0119 cation transport protein.
Probab=99.32 E-value=3.9e-12 Score=129.69 Aligned_cols=153 Identities=16% Similarity=0.210 Sum_probs=129.8
Q ss_pred hhHhhHHHHhCCC---chhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy15069 286 VYIVKLAEQRGVT---RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYA 362 (461)
Q Consensus 286 ~~~~~~~~~~g~s---~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (461)
...|.+.++++++ ..+.++..+.+.++.+++.++.|+++||+|+|+.. ..+.++.+++.++..+.++++.+++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL--LLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH--HHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 4566666889998 89999999999999999999999999997765544 356666677777777888999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 363 GVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 363 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
++.|++.+...+....++.|.+|+++|+.+.++......+|.+++|.+++.+.+ |++.+++.++..++..+..+++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999988765543 9999999888877777666655
Q ss_pred HH
Q psy15069 443 PS 444 (461)
Q Consensus 443 ~~ 444 (461)
++
T Consensus 264 ~e 265 (505)
T TIGR00898 264 PE 265 (505)
T ss_pred CC
Confidence 44
No 201
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.31 E-value=1.7e-11 Score=119.03 Aligned_cols=156 Identities=11% Similarity=0.053 Sum_probs=118.9
Q ss_pred cchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC-----CcchhHHHHHHHHHHHHHHHHhhhh---hh
Q psy15069 283 VPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRP-----CVNRLYIYNGCLAICGAATVICAFC---YN 354 (461)
Q Consensus 283 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 354 (461)
.....+|.++++.|+|.++.++..+. .+...+ ++++|++.||+ |+||.+++ .+.+..++......+. .+
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~-~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLV-LTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHH-HHHHHHHHHHHHHHcCCcchh
Confidence 34557888889999999999998655 444444 89999999997 54444433 4444444444444444 35
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC-------chHHHHH
Q psy15069 355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS-------YSPAFFL 427 (461)
Q Consensus 355 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~-------~~~~f~~ 427 (461)
.+.+....++.+++.+...+...+++.|++|+++|+.+.++......+|..+++.+++.+.+..|. |+..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 555666666778888888888899999999999999999999999999999999999999887652 9999999
Q ss_pred HhHHHHHHHHHHHH
Q psy15069 428 AGGAIFVSGVMLFV 441 (461)
Q Consensus 428 ~~~~~l~~~~~~~~ 441 (461)
.++..++..+..+.
T Consensus 163 ~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 163 TALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877776655544
No 202
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.31 E-value=1.3e-11 Score=119.87 Aligned_cols=152 Identities=13% Similarity=0.015 Sum_probs=123.0
Q ss_pred ccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHH
Q psy15069 280 GFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELA 359 (461)
Q Consensus 280 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (461)
.+..+...+|.+.+++|++..+.++..+...++..++.++.|+++||+++|+.... +.++..++.+.. ..++.+.++
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~--~~~~~~~~~~~~-~~~~~~~l~ 91 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAA--GLLLIAAGILIR-SAPGTALLF 91 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHH--HHHHHHHHHHHH-HhccHHHHH
Confidence 34556778999999999999999999999999999999999999999877665443 444444444444 556778888
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC-chHHHHHHhHHHHHH
Q psy15069 360 IYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS-YSPAFFLAGGAIFVS 435 (461)
Q Consensus 360 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~-~~~~f~~~~~~~l~~ 435 (461)
+.+++.|++.+...+....++.|.+| ++|+++.++.+....+|..+++.+.+.+.+..+. |+..|...+++.++.
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 88899999998877777788888886 6899999999999999999999999988877544 888887776654443
No 203
>PRK09952 shikimate transporter; Provisional
Probab=99.29 E-value=4.3e-11 Score=119.60 Aligned_cols=165 Identities=12% Similarity=0.099 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHH-HHh--CCCchhhHHHH-----HHHhhhhhhhhhhhhhccCCCCcchhHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLA-EQR--GVTRSNASSLI-----SIVGAANMVSRVILGYISDRPCVNRLYIYNG 337 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--g~s~~~~~~~~-----~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~ 337 (461)
.++...++.++.......+....|.+. +++ +.++. .++.. +...++..+++++.|+++||+|+|+.+ ..
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l--~~ 99 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML--ML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH--HH
Confidence 345555666666666666555666555 444 66665 34443 233455678889999999997665544 45
Q ss_pred HHHHHHHHHHHhhhhhhHH--------HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccc
Q psy15069 338 CLAICGAATVICAFCYNYV--------ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPP 409 (461)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~ 409 (461)
++++.+++.++..+.+++. .+++.+++.|++.|...+....++.|.+|+++|+...+.......+|..+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~ 179 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTG 179 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 7777777777788888765 47778899999999999998999999999999999999999888888888876
Q ss_pred eeeeeec--------ccCCchHHHHHHhHHHHH
Q psy15069 410 IAGFLYD--------STLSYSPAFFLAGGAIFV 434 (461)
Q Consensus 410 i~g~l~~--------~~g~~~~~f~~~~~~~l~ 434 (461)
+.+.+.. .. +|+..|++.++..++
T Consensus 180 ~~~~l~~~~~~~~~~~~-gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 180 LVSLISMMTTDEQFLSW-GWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHhCCHHHhhcc-ChHHHHHHHHHHHHH
Confidence 6655442 23 599999887766544
No 204
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.29 E-value=1.7e-12 Score=134.52 Aligned_cols=170 Identities=11% Similarity=0.125 Sum_probs=131.3
Q ss_pred HHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh
Q psy15069 274 NIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY 353 (461)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (461)
.+........+...++.+.++++++..+.|++.+.+.+++.++.++.+++.||.+++|.+ ..++++.+++.+++.+.+
T Consensus 42 ~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i--~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 42 QLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI--GIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred HHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE--EecHHHHHHHHHHHhChH
Confidence 333333334455567777789999999999999999999999999999999997655543 345555555555444321
Q ss_pred ---------------------------------------------------hHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069 354 ---------------------------------------------------NYVELAIYAGVFGAMIGAYVGLTSVILVD 382 (461)
Q Consensus 354 ---------------------------------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 382 (461)
.+..+++..++.|++.+..+++..+++.|
T Consensus 120 f~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d 199 (633)
T TIGR00805 120 FLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDD 199 (633)
T ss_pred HhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhc
Confidence 13456678999999999999999999999
Q ss_pred hcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc---------------------CCchHHHHHHhHHHHHHHHHHHH
Q psy15069 383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST---------------------LSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~---------------------g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
.+|+++|+.+.|+.+....+|..+|+.++|++.+.. |.|+..|++.+++.++.++.+++
T Consensus 200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999887542 23677788888887777666555
Q ss_pred HHHh
Q psy15069 442 IPSL 445 (461)
Q Consensus 442 ~~~~ 445 (461)
+++.
T Consensus 280 ~p~~ 283 (633)
T TIGR00805 280 FPKA 283 (633)
T ss_pred Cccc
Confidence 5543
No 205
>PRK10133 L-fucose transporter; Provisional
Probab=99.29 E-value=3.5e-11 Score=119.99 Aligned_cols=147 Identities=12% Similarity=0.075 Sum_probs=120.1
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 345 (461)
.+..+.+.++...+........+|.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|+|+..+ .+..+.+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~--~g~~~~~~~ 104 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGII--TGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHHHHH
Confidence 345566666777777777888899988999999999999999999999999999999999977666554 455555555
Q ss_pred HHHh---hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069 346 TVIC---AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL 414 (461)
Q Consensus 346 ~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l 414 (461)
.+++ .+.++++.+.+.+++.|++.+...+....++.+..|++++....++.+....+|..+||.+++.+
T Consensus 105 ~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 105 AALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 35678888999999999999999999999888887766666689999999999999999887654
No 206
>PRK15075 citrate-proton symporter; Provisional
Probab=99.28 E-value=4.8e-11 Score=119.21 Aligned_cols=162 Identities=18% Similarity=0.146 Sum_probs=122.9
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHH-HHH-----hhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLI-SIV-----GAANMVSRVILGYISDRPCVNRLYIYNGCL 339 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~-~~~-----~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~ 339 (461)
.....+++.++.+.....+....|.+.++++.+..+.+.+. +.. .+...++.++.|+++||+|+|+.++ .+.
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~--~~~ 93 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI--VTL 93 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH--HHH
Confidence 34557778888888888888999988899998877755432 222 2223468899999999977665544 556
Q ss_pred HHHHHHHHHhhhhhhHH--------HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069 340 AICGAATVICAFCYNYV--------ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA 411 (461)
Q Consensus 340 ~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~ 411 (461)
++.+++..+..+.++++ .+++.+++.|++.+...+....++.|++|+++|+++.++.+...++|..+++.++
T Consensus 94 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g 173 (434)
T PRK15075 94 SIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLG 173 (434)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777777777765 3577789999999988888889999999999999999999988888877777766
Q ss_pred eeee--------cccCCchHHHHHHhH
Q psy15069 412 GFLY--------DSTLSYSPAFFLAGG 430 (461)
Q Consensus 412 g~l~--------~~~g~~~~~f~~~~~ 430 (461)
+.+. +.. +|+..|++...
T Consensus 174 ~~l~~~~~~~~~~~~-gWr~~f~~~~~ 199 (434)
T PRK15075 174 YLLNQWLSPAQMAEW-GWRIPFLIGCL 199 (434)
T ss_pred HHHHHhCCHHHHhcc-chHHHHHHHHH
Confidence 6542 344 59999987543
No 207
>KOG2532|consensus
Probab=99.26 E-value=1.2e-11 Score=122.53 Aligned_cols=149 Identities=15% Similarity=0.227 Sum_probs=131.5
Q ss_pred HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh--hHHHHHHHHHHHhhhhhh
Q psy15069 294 QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY--NYVELAIYAGVFGAMIGA 371 (461)
Q Consensus 294 ~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~~~~ 371 (461)
++.+++.+-+++++.+..+.+++.+..|++.||+|.|+... .+.++.++..++.+.+. +.+.+++.+++.|++.|.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~--~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFF--ISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHH--HHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 57889999999999999999999999999999977666544 56667777777777654 556778899999999999
Q ss_pred HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
.+|....+..++.|+++|++..++.....++|.+++-+++|.+.+...+|+.+|++.+++.++..++++.+..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999998445999999999999999988877644
No 208
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.25 E-value=2.1e-11 Score=100.88 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=107.7
Q ss_pred HHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc
Q psy15069 307 SIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGL 386 (461)
Q Consensus 307 ~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 386 (461)
+...++.++++++.|++.||+++|+... .+.....+..+.....++.+...+..++.|++.+...+....++.|.+|+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLL--VGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHH--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 4456778899999999999976555443 44445555555566667888888888999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 387 DRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 387 ~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
++|+++.++.+....+|..++|.+.+.+.+.. +|+..+++.+.+.+++.+..+.
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999876 4888888888777766655543
No 209
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.25 E-value=5e-11 Score=133.62 Aligned_cols=157 Identities=17% Similarity=0.172 Sum_probs=118.3
Q ss_pred cccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCc--hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHH
Q psy15069 261 LLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTR--SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNG 337 (461)
Q Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~--~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~ 337 (461)
.++++.++.+++..++..+........+..++ .+++.+. ...+++.+++.++.+++++++|+++||+|+|+.++...
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 46777787777777776665544444444343 5555543 34688888999999999999999999987665544322
Q ss_pred HH-HHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069 338 CL-AICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 338 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
.+ ++..+...+....++++.+++..++.|++.+...+...+++.|++|+++|++++|+......+|.++||.++|++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 11222222233446788888999999999999999999999999999999999999999999999999999999987
Q ss_pred c
Q psy15069 417 S 417 (461)
Q Consensus 417 ~ 417 (461)
.
T Consensus 165 ~ 165 (1146)
T PRK08633 165 S 165 (1146)
T ss_pred h
Confidence 6
No 210
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.24 E-value=1.8e-09 Score=103.53 Aligned_cols=324 Identities=14% Similarity=0.065 Sum_probs=190.0
Q ss_pred HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHh
Q psy15069 25 TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTC 104 (461)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~ 104 (461)
++.+.-+..+...+.-+++..+++|...+.=.....++..++.++.++++|++.=++. -++.+++.|..-..-.. ..+
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~G-v~las~ssg~GE~tfL~-lt~ 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLG-VVLASLSSGLGEVTFLS-LTH 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHH-HHHHhhhhhhhHHHHHH-HHH
Confidence 4556666777888888888899999987666777777888999999999998876664 36777777765444433 345
Q ss_pred hhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcc
Q psy15069 105 YFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGW--KITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHL 182 (461)
Q Consensus 105 ~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw--~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (461)
++++ ...+-+.+|.+.++++|+..-..+.+ .|+ |.++++...+.++..+..++.+|.++..+...+.+. +++
T Consensus 139 ~y~~---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~--~~~ 212 (402)
T PF02487_consen 139 FYGK---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES--EDE 212 (402)
T ss_pred hcCc---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC--CCc
Confidence 5554 45788899999999999888877766 666 667777766665555444555544322111000000 000
Q ss_pred cccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccc
Q psy15069 183 RIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELL 262 (461)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 262 (461)
. +++.... +.++++.+ ...+...+.+++.. ++++
T Consensus 213 -------~------------------------------~~~~~~~----~~~~~~~~---~~~~~~~~~k~~~~--k~Ll 246 (402)
T PF02487_consen 213 -------A------------------------------EDDLLES----ETSESKPD---SSSKLSFKEKLKRL--KPLL 246 (402)
T ss_pred -------c------------------------------ccccccc----cccccccc---ccchhhHHHHHHHH--HHHH
Confidence 0 0000000 00000000 00001111222111 1111
Q ss_pred cchhHHHHHHHHHHHhhccccchhhHhhHH--HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069 263 RDPIFILFTISNIFTSIGFNVPYVYIVKLA--EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA 340 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~ 340 (461)
+ -..-+.+.++..+....++ .|... .+..-..++..+....+.++.+++|--...+ | .|+.+++.+.-.
T Consensus 247 ~--ymiPL~lVY~aEY~InqGv---~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--r--ir~lwils~LQ~ 317 (402)
T PF02487_consen 247 W--YMIPLFLVYFAEYFINQGV---APTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--R--IRRLWILSLLQV 317 (402)
T ss_pred H--HHHHHHHHHHHHHHHHhch---HHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--e--hhhHHHHHHHHH
Confidence 1 1222344444444433332 23332 2233335667777778888888887643332 2 445444322222
Q ss_pred HHHHH---HHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069 341 ICGAA---TVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA 411 (461)
Q Consensus 341 ~~~~~---~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~ 411 (461)
+-.+. -...-+.++.|.+.+.++..|+..|..+......+.+..++++|..++|.....-.+|-.++..++
T Consensus 318 ~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 318 INLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 22111 122334668888888899999999999998888889989999999999999988888877766553
No 211
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.23 E-value=1e-10 Score=116.03 Aligned_cols=175 Identities=15% Similarity=0.215 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC----CCCcchhHHHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD----RPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~~~~~~~~~~~~~~~~ 342 (461)
...+....+...+++.....+++.|+++.|.++...+.++.+..+..++..++.|+++| |+||||.++. .+....
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il-~g~~~~ 84 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIA-AGAALV 84 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHH-HHHHHH
Confidence 44455555566777777888899999999999999999999999999999999999999 4887776654 334444
Q ss_pred HHHHHHhhhhhhH-----------------HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccch--hHHHHHHHHHHHhh
Q psy15069 343 GAATVICAFCYNY-----------------VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRL--TNAFGLLLLFQGIA 403 (461)
Q Consensus 343 ~~~~~~~~~~~~~-----------------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g 403 (461)
.+++.++++.++. +..++...+..++.....+...+++.|.+|+++| +.+.++.+.+.++|
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG 164 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIG 164 (477)
T ss_pred HHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHH
Confidence 4555555554432 2223334455667777777888899999998765 57999999999999
Q ss_pred hhhccceeeee--eccc------------CCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 404 SLVGPPIAGFL--YDST------------LSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 404 ~~~gp~i~g~l--~~~~------------g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+.+|+.+++.. .+.. .+++..|++.+++.+++.+...+.
T Consensus 165 ~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 165 NVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred HHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 99999988764 2211 157889998888877777665443
No 212
>PTZ00207 hypothetical protein; Provisional
Probab=99.22 E-value=1e-10 Score=118.48 Aligned_cols=156 Identities=14% Similarity=0.156 Sum_probs=118.8
Q ss_pred cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhh------hh
Q psy15069 281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFC------YN 354 (461)
Q Consensus 281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 354 (461)
.|.+..+.|.+.+++|++..+.+++.+... ...+..++.|++.||+|+|+. +.++.++.+++.++..++ .+
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~v--llig~ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPI--FVLSMTVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHHHhcccccCc
Confidence 456667788878999999999999887633 334567788999999665544 446666666776666665 57
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHH
Q psy15069 355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFV 434 (461)
Q Consensus 355 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~ 434 (461)
++.+.+..++.|++.+...+.....+.+++| ++||.+.|+.....++|+++.+.+...+.. .+|+..|++.+++.++
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~v 196 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALV 196 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHH
Confidence 8888889999999998888888888999997 788999999999999999864444443433 2477888888888777
Q ss_pred HHHHHHHH
Q psy15069 435 SGVMLFVI 442 (461)
Q Consensus 435 ~~~~~~~~ 442 (461)
..++++..
T Consensus 197 v~ll~~~~ 204 (591)
T PTZ00207 197 VGILAIVF 204 (591)
T ss_pred HHHHHHhh
Confidence 66665544
No 213
>KOG2615|consensus
Probab=99.20 E-value=7.2e-11 Score=109.45 Aligned_cols=129 Identities=20% Similarity=0.234 Sum_probs=106.9
Q ss_pred CCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHH
Q psy15069 297 VTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLT 376 (461)
Q Consensus 297 ~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 376 (461)
.+..-.|.+-+.+.+..++.++.+|.++||+|||.. +..|++..++...+++.+.++..+++.+++.|++-|-. .+.
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpv--ll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~ 141 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPV--LLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVI 141 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHH
Confidence 355678899999999999999999999999766554 44666777778888888888866666699999988754 556
Q ss_pred HHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec---ccCCchHHHHHH
Q psy15069 377 SVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD---STLSYSPAFFLA 428 (461)
Q Consensus 377 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~---~~g~~~~~f~~~ 428 (461)
.++++|++++++|+.+++.++...++|.++||.++|++.. ..|+|..++.-.
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~ 196 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCL 196 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHH
Confidence 7789999999999999999999999999999999999987 667776655333
No 214
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.20 E-value=2.3e-11 Score=117.16 Aligned_cols=175 Identities=14% Similarity=0.221 Sum_probs=125.2
Q ss_pred ccchhHHHHHHHHHHHhhccccchhhHhhHHH-HhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069 262 LRDPIFILFTISNIFTSIGFNVPYVYIVKLAE-QRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA 340 (461)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~ 340 (461)
.||+.+|.+...+++.++......++.|.+++ +.|+|.+++|.++++..+..++.+++.|.++||.+.||.++..+..+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 57889999999999999999999999999995 58999999999999999999999999999999999888776554443
Q ss_pred HHHHH-HHHhhhh----hhHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee
Q psy15069 341 ICGAA-TVICAFC----YNYV-ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL 414 (461)
Q Consensus 341 ~~~~~-~~~~~~~----~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l 414 (461)
....+ ++.+.+. .+.+ ..++..+..+++..+..|+.-+++.+.. ++.+.-+|-..+.+++|.+++..++|.+
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L 161 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGIL 161 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhhee
Confidence 33222 2222222 2322 2223334456666666677766665553 5567789999999999999999999999
Q ss_pred ecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 415 YDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 415 ~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.+. +.+..|++..+..++..++.+
T Consensus 162 ~~i--~p~~~fwi~s~~~~il~lll~ 185 (412)
T PF01306_consen 162 FNI--NPNIIFWIASAAAIILLLLLL 185 (412)
T ss_dssp HHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred eee--CccHHHHHHHHHHHHHHHHHH
Confidence 986 356777766555444444333
No 215
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.18 E-value=4.3e-10 Score=113.37 Aligned_cols=179 Identities=17% Similarity=0.145 Sum_probs=133.7
Q ss_pred ccccchhHHHHHHHHHHHhhc----cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHH
Q psy15069 260 ELLRDPIFILFTISNIFTSIG----FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIY 335 (461)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~ 335 (461)
..+++++++..+.+..+.... .......++.+.++.|-+ .+..|+.+...++..++.++.|+++|.+|| +...
T Consensus 35 g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGR--r~~~ 111 (599)
T PF06609_consen 35 GYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGR--RYFF 111 (599)
T ss_pred CceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcc--hHHH
Confidence 456777776655444443333 233334456666888865 666788888899999999999999999664 4455
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069 336 NGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY 415 (461)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~ 415 (461)
..+.++..++.+...-+++...++....+.|++.|... +....+.|..|.|.|..+.++.....-+...++|.++..+.
T Consensus 112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 56777777888888888899999999999999977665 44556899999999998888777766666667888877766
Q ss_pred cccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 416 DSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 416 ~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
.+ ++||+.|++..++..++.++.++..
T Consensus 191 ~~-~~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 191 AH-SGWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred cC-CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 55 4799999999998887776655443
No 216
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.15 E-value=6.1e-10 Score=109.62 Aligned_cols=176 Identities=11% Similarity=0.006 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHH--HHHHhhhhhhhhhhh-hhccCCCCcchhHHHHHHHHHH-
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSL--ISIVGAANMVSRVIL-GYISDRPCVNRLYIYNGCLAIC- 342 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~--~~~~~~~~~~g~~~~-g~l~dr~~~~~~~~~~~~~~~~- 342 (461)
+..+...++.+...+....+.+|.++++.|.|.++.|++ .....+..++..++. ++..||.|+||.+++...+...
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455667788888888899999999999999999999997 456788888888888 5578998887776544333222
Q ss_pred -HHHHHHhhhhhh-HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069 343 -GAATVICAFCYN-YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS 420 (461)
Q Consensus 343 -~~~~~~~~~~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~ 420 (461)
...+.......+ ..+.....++.+++.+...+....+..|..++++++...+.......+|..+|+...+++.++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g- 161 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG- 161 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 111111212222 33334445556677777777777788888887877888888888788999999988889999875
Q ss_pred chHHHHHHhHHHHHHHHHHHHHH
Q psy15069 421 YSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 421 ~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
|+..|++.+++.++..+..+..+
T Consensus 162 w~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 162 QRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999988877666655443
No 217
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.12 E-value=8.3e-11 Score=113.56 Aligned_cols=187 Identities=19% Similarity=0.212 Sum_probs=153.8
Q ss_pred cccch-hHHHHHHHHHHHhhccccchhhHhhHH-HHhC----CCchhhHHHHHHHhhhhhhhhhhhhhccCCC-CcchhH
Q psy15069 261 LLRDP-IFILFTISNIFTSIGFNVPYVYIVKLA-EQRG----VTRSNASSLISIVGAANMVSRVILGYISDRP-CVNRLY 333 (461)
Q Consensus 261 ~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g----~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~ 333 (461)
.+++| .++.+...-+.-.+++|+....+..|+ .+.+ ++++++.-+++.++...-+..+++||++||+ |.+|..
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 45555 577788889999999999999999888 6777 9999999999998888888999999999995 555544
Q ss_pred HHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhhhhccc
Q psy15069 334 IYNGCLAICGAATVICAFC--YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIASLVGPP 409 (461)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~gp~ 409 (461)
+ .+.++..++-+.+... .+...+++...+.++|.|..-+...+++.|++|++ +|-.+.++.++..++|+.++|.
T Consensus 96 ~--lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~ 173 (498)
T COG3104 96 V--LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPI 173 (498)
T ss_pred H--HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHH
Confidence 4 4555666666666555 35677888888888999999999999999999865 4677888899999999999999
Q ss_pred eeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHhHh
Q psy15069 410 IAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLL 450 (461)
Q Consensus 410 i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~ 450 (461)
+.+++.+..| |...|...++-..++.+..++.++..+...
T Consensus 174 i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 174 ITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 9999999975 999999999999988888877765544433
No 218
>KOG3762|consensus
Probab=99.12 E-value=1.2e-09 Score=105.87 Aligned_cols=186 Identities=14% Similarity=0.111 Sum_probs=150.6
Q ss_pred ccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069 260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCL 339 (461)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~ 339 (461)
+++.++...++++...+..++...+.+++=-++++.|..+...|......-.+.++.=++.+++.+|+|.-+... .++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~--lgL 443 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY--LGL 443 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee--ehh
Confidence 456778777777777777777777888887778999988888887777777888888888999999977655543 445
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHH-HHhhhhhccceeeeeeccc
Q psy15069 340 AICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLF-QGIASLVGPPIAGFLYDST 418 (461)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~~gp~i~g~l~~~~ 418 (461)
....+=++......|.|.....-++.|+..+..+....+++....|++.++++.|++... .++|-.+|.+|+|.+....
T Consensus 444 a~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 444 ACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred hHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 555556666777889999998999999999999999999999999999999999997766 5699999999999999988
Q ss_pred CCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 419 LSYSPAFFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 419 g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
| -+..|...++.+++..+....+.+..++
T Consensus 524 g-~~ttf~~~giAcl~~l~~~~~iq~~l~~ 552 (618)
T KOG3762|consen 524 G-ARTTFRIFGIACLVTLALFISIQLLLKR 552 (618)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 5 6788888888888777776666544433
No 219
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.10 E-value=4.2e-10 Score=110.11 Aligned_cols=174 Identities=18% Similarity=0.227 Sum_probs=127.6
Q ss_pred HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
+...++++++....+.+++|.|+++.|+|..|+|.+.+...+..+++.+++|.++||.+.+++. +.++.++.++.++..
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~-l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI-LALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH-HHHHHHHHHHHHHHH
Confidence 5666677777888888999999999999999999999999999999999999999996444443 345555566666666
Q ss_pred hhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee-eeeecccC--CchHHHH
Q psy15069 350 AFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA-GFLYDSTL--SYSPAFF 426 (461)
Q Consensus 350 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~-g~l~~~~g--~~~~~f~ 426 (461)
...++++.+....+++.++..+..|+..++..+..+ +++.-+|-....+.+|-+++.... +.+.+..+ .....++
T Consensus 86 ~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 86 AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 667788888888888888888889999888888875 456778888888888888775542 22222221 2334556
Q ss_pred HHhHHHHHHHHHHHHHHHhh
Q psy15069 427 LAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 427 ~~~~~~l~~~~~~~~~~~~~ 446 (461)
+.+.+.++.+...+.+|+.+
T Consensus 164 i~~~~~~ll~~~~l~lp~~~ 183 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCc
Confidence 65555555554455555443
No 220
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.08 E-value=3.7e-10 Score=106.69 Aligned_cols=175 Identities=13% Similarity=0.040 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 345 (461)
.+++-.++.....+..+.+....+.+-+++|+|++|.+++.++..+.+.+.|++.|.+.||+|-|+... .++++..+-
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~--~s~~l~~IP 92 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI--LSMLLLLIP 92 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH--HHHHHHHHH
Confidence 344433333333333333344444444899999999999999999999999999999999987555443 444444444
Q ss_pred HHHhhhhh---hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCC--
Q psy15069 346 TVICAFCY---NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS-- 420 (461)
Q Consensus 346 ~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~-- 420 (461)
.+...+.. ++|.+++...+.|++- ..++.....+.+.+|++++|.+.|+.. .+++|..+...++..+....|.
T Consensus 93 ~~~~~~a~~~~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~ 170 (417)
T COG2223 93 CLGLAFAVTYPSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLA 170 (417)
T ss_pred HHHHHHHccCCchHHHHHHHHHHhccc-ceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHH
Confidence 44444443 4557888888888654 456777778999999999999999999 9999998888887777777663
Q ss_pred chHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 421 YSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 421 ~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
|+.+..+.....++..+..++.-+
T Consensus 171 w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 171 WRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888888888777776666555433
No 221
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.07 E-value=3.3e-10 Score=113.29 Aligned_cols=163 Identities=12% Similarity=0.034 Sum_probs=113.6
Q ss_pred HhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC----CcchhHHHHHHHHHHHHHHHHhhh
Q psy15069 277 TSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP----CVNRLYIYNGCLAICGAATVICAF 351 (461)
Q Consensus 277 ~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----~~~~~~~~~~~~~~~~~~~~~~~~ 351 (461)
.......+..+++.|+ ++.|+++.++|+++++..+...+..++.|+++||. ||||.++ ..+....+++.+++.+
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i-~~~~~~~~i~~~~~~~ 89 (437)
T TIGR00792 11 NNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWL-LIGAIPFSIVLVLLFT 89 (437)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhH-HHhHHHHHHHHHHHHh
Confidence 3344455566777777 67899999999999999999999999999999984 4444444 3444444544444443
Q ss_pred hhh------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeecc------c
Q psy15069 352 CYN------YVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS------T 418 (461)
Q Consensus 352 ~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~------~ 418 (461)
.++ .+...+..++++++.+.......++..|.. ++++|++..++.+....+|..+++.+.+.+... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~ 169 (437)
T TIGR00792 90 TPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDK 169 (437)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 332 334455556777777766666667777876 468899999999888888877766665555421 1
Q ss_pred CCchHHHHHHhHHHHHHHHHHH
Q psy15069 419 LSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 419 g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.+|+..+.+.+++.++..+..+
T Consensus 170 ~g~~~~~~i~~~l~~~~~~~~~ 191 (437)
T TIGR00792 170 FGWFMFALVLALIGVVSLIICF 191 (437)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 2588888888887776665543
No 222
>KOG3098|consensus
Probab=99.06 E-value=2.1e-08 Score=97.81 Aligned_cols=311 Identities=17% Similarity=0.096 Sum_probs=188.6
Q ss_pred HHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhh-h
Q psy15069 29 ASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-E 107 (461)
Q Consensus 29 ~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~ 107 (461)
.++.+..+.+++++++.+.|+.|+|..+.+|..+...-....-+. |-+.++++ ..+.|+|.+..|..--.++.++. +
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfs-sallG~Gaallw~GqG~ylt~~st~ 133 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFS-SALLGFGAALLWTGQGGYLTSNSTR 133 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHH-HHHhhhhHHheecccceehhhcCCh
Confidence 666777788899999999999999999999999998888776664 45666665 78999999999998888888888 5
Q ss_pred ccchhhhhhhccchhhhHHHHhHHHHHHHHh--------hchh-H----------HHHHHHHHHHHHHHHHhhcccCCCC
Q psy15069 108 RLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--------YGWK-I----------TLLVLSVTVLSAVLFGILLRPLEEQ 168 (461)
Q Consensus 108 ~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--------~gw~-~----------~f~i~~~~~l~~~i~~~~~~~~~~~ 168 (461)
+++.+..++.-+....+.++|..+...+... .+-+ . ...+.++++.+..+...-.-.. |.
T Consensus 134 ~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~-p~ 212 (461)
T KOG3098|consen 134 ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL-PS 212 (461)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec-Cc
Confidence 6778887777777667766665544433210 0111 0 1111222211111111111000 00
Q ss_pred CCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCch
Q psy15069 169 PVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDD 248 (461)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (461)
+..+.++ +..+ +.
T Consensus 213 ~~~~~~~-----------------------------------------------------------~~~~--------~~ 225 (461)
T KOG3098|consen 213 KDVVNCK-----------------------------------------------------------SSSE--------TS 225 (461)
T ss_pred cchhhhh-----------------------------------------------------------hhcc--------cc
Confidence 0000000 0000 00
Q ss_pred hhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH--H-HhCCCchh-hHHHHHHHhhhhhhhhhhhhhcc
Q psy15069 249 TKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA--E-QRGVTRSN-ASSLISIVGAANMVSRVILGYIS 324 (461)
Q Consensus 249 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~g~s~~~-~~~~~~~~~~~~~~g~~~~g~l~ 324 (461)
.....+. ..+++++|+...+....+..+.....+....|..+ . ..+.+... .+......+++.+++....+.+.
T Consensus 226 ~~~~l~~--~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~ 303 (461)
T KOG3098|consen 226 FSELLKL--TFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILS 303 (461)
T ss_pred HHHHHHH--HHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 1111111 12467888888777777766666655555666554 2 44444333 44444567788888999999999
Q ss_pred CCCC-cchhHHHHHHHHHHHHHHHHhhh-h-----------------hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC
Q psy15069 325 DRPC-VNRLYIYNGCLAICGAATVICAF-C-----------------YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLG 385 (461)
Q Consensus 325 dr~~-~~~~~~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 385 (461)
+|.+ .++.....++..+..+..++.-. . ++.....+..++.|++........+.++....|
T Consensus 304 ~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~ 383 (461)
T KOG3098|consen 304 KRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP 383 (461)
T ss_pred hhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 8742 22222222222222222222111 1 124455667789999999999999999999995
Q ss_pred ccchhHHHHHHHHHHHhhhhhccceee
Q psy15069 386 LDRLTNAFGLLLLFQGIASLVGPPIAG 412 (461)
Q Consensus 386 ~~~~~~~~g~~~~~~~~g~~~gp~i~g 412 (461)
++|.++.++..+-+.++..++-+...
T Consensus 384 -~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 384 -DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred -CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 77899999998888888777655433
No 223
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.05 E-value=2.7e-08 Score=97.24 Aligned_cols=327 Identities=8% Similarity=-0.005 Sum_probs=188.0
Q ss_pred HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhh------c--cc----chhhHHHHhh--cccccccc-ccchh
Q psy15069 33 VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSV------F--AK----NVITLCITIG--FGTGLGFG-LIYLP 97 (461)
Q Consensus 33 ~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~------~--~~----~~~~l~i~~~--~l~G~g~~-~~~~~ 97 (461)
.+...+.++..|.++||..|.+++..+.+.--++..+++ + .+ +-+....++- .+.|.-.- +....
T Consensus 48 ~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~ 127 (432)
T PF06963_consen 48 SLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIAN 127 (432)
T ss_pred HHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 556678899999999999999987777554433332211 1 11 1222222211 12221111 11222
Q ss_pred HHHHHHhhh-------hccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhh-cccC----
Q psy15069 98 AIVSVTCYF-------ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGIL-LRPL---- 165 (461)
Q Consensus 98 ~~~~~~~~f-------~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~-~~~~---- 165 (461)
..+.-.||. ++.+.+.++...-.-.+.-+++|.+.+.+.+..+.+....+.++..+...+.=++ +...
T Consensus 128 ~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~ 207 (432)
T PF06963_consen 128 TIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSV 207 (432)
T ss_pred hheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 233445664 2345667777777788899999999999999899999888888877766554332 2211
Q ss_pred CCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccC
Q psy15069 166 EEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNL 245 (461)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (461)
|+..++++.+++..++ .+....+++++..+
T Consensus 208 P~L~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~--- 237 (432)
T PF06963_consen 208 PALAVKKRSSESESSS-----------------------------------------------DEESSSESSSDPSI--- 237 (432)
T ss_pred hHhcCCCCCccccccc-----------------------------------------------cccccccccchhhH---
Confidence 1111100000000000 00000000000000
Q ss_pred CchhhhhHhhh-h-ccccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhc
Q psy15069 246 SDDTKQTLREM-L-DMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYI 323 (461)
Q Consensus 246 ~~~~~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l 323 (461)
.+..+...++. . ...++++| .++..++..+.++..-.+...+..|+...|+++...|..-+...+.++.|.++..++
T Consensus 238 ~~~~~~~~~~~~~~w~~Y~~q~-vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l 316 (432)
T PF06963_consen 238 LKRLWNPLRTIIRGWRTYFRQP-VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWL 316 (432)
T ss_pred HHHHHHHHHHHhccHHHHHhCH-HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111111111 1 12355665 445566666666666677788889998889999999999999999999999999999
Q ss_pred cCCCCcchhHHHH----HHHHHHHHHHHHhhhhh----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069 324 SDRPCVNRLYIYN----GCLAICGAATVICAFCY----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395 (461)
Q Consensus 324 ~dr~~~~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 395 (461)
.+|+|.-|.-... ..++..++..+..+-.+ +...+....++-=+|.-...-...-+++|.+|+++||+..|.
T Consensus 317 ~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gv 396 (432)
T PF06963_consen 317 MKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGV 396 (432)
T ss_pred HHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHH
Confidence 9998876653322 22333333333222222 222333333444455555666667789999999999999999
Q ss_pred HHHHHHhhhhhccce
Q psy15069 396 LLLFQGIASLVGPPI 410 (461)
Q Consensus 396 ~~~~~~~g~~~gp~i 410 (461)
-+..+++...+--.+
T Consensus 397 q~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 397 QNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988877665443
No 224
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.05 E-value=1.5e-09 Score=106.44 Aligned_cols=126 Identities=13% Similarity=0.123 Sum_probs=95.5
Q ss_pred hhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHH--------HHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069 311 AANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYV--------ELAIYAGVFGAMIGAYVGLTSVILVD 382 (461)
Q Consensus 311 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~~~~~~~~~~~~~~~~ 382 (461)
++..+++++.|+++||+|+|+.++ .+.++.+++.++..+.++.. .+++.+++.|++.+...+....++.|
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~ 123 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLV--ITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAE 123 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHH--HHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhh
Confidence 334578999999999977555443 55666666666666666643 46677889999999888888999999
Q ss_pred hcCccchhHHHHHHHHHHHhhhhhccceeeeee--------cccCCchHHHHHHhHHHHHHHHHH
Q psy15069 383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY--------DSTLSYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~--------~~~g~~~~~f~~~~~~~l~~~~~~ 439 (461)
.+|+++|+...++.+....+|..+++.+.+.+. +.. +|+..|++.+++.+++.+..
T Consensus 124 ~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~ 187 (394)
T TIGR00883 124 YAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW-GWRIPFLVSAVLVLIGLYLR 187 (394)
T ss_pred cCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc-chHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988766543 223 58888887776665554443
No 225
>KOG2504|consensus
Probab=99.04 E-value=7.3e-10 Score=111.29 Aligned_cols=173 Identities=14% Similarity=0.156 Sum_probs=143.2
Q ss_pred HHHHHHHHHHhhcc----ccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGF----NVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICG 343 (461)
Q Consensus 268 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~ 343 (461)
|.++++.|+.+... +.+..+.+.+.++++.+.++++++.++......+..++.+.+.||+|.|... +.+.++.+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~--i~G~~v~~ 122 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM--IAGGLVAA 122 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH--HHHHHHHH
Confidence 55555555554443 3344566677789999999999999999999999999999999997766554 46777888
Q ss_pred HHHHHhhhhhhHHHHHHHH-HHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCch
Q psy15069 344 AATVICAFCYNYVELAIYA-GVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYS 422 (461)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~ 422 (461)
+++++..++++.|.+++.. ++.|+|.++.+.....++..+|+ ++|+.+.|+.....++|.++-|.+..++.+..| |+
T Consensus 123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~r 200 (509)
T KOG2504|consen 123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG-WR 200 (509)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC-cH
Confidence 8999999999998887665 78899999988888888998887 889999999999999999999999999999986 99
Q ss_pred HHHHHHhHHHHHHHHHHHHHHH
Q psy15069 423 PAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 423 ~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
..+++.+.+.+-.++.....++
T Consensus 201 ~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 201 GALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999988888777776666655
No 226
>KOG0255|consensus
Probab=99.04 E-value=5.7e-10 Score=114.22 Aligned_cols=147 Identities=16% Similarity=0.097 Sum_probs=126.7
Q ss_pred HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069 293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY 372 (461)
Q Consensus 293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 372 (461)
+....+.....+..+++.++.++|.+++|.++||+|| +.++.+++++..++.+...++++++.+.+.+++.|++.+..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GR--k~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGR--KPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhccc--HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence 4455677788888999999999999999999999554 44455777777888888889999999999999999999999
Q ss_pred HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069 373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~ 445 (461)
......++.|++++++|+.+..+ ......++.++|..++++.. +|++.+++..+..++..+..++.++.
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es 257 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPES 257 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcC
Confidence 99999999999999999999999 88888899999999888887 69999999999888887775554343
No 227
>KOG2533|consensus
Probab=99.03 E-value=6.4e-10 Score=110.66 Aligned_cols=147 Identities=14% Similarity=0.124 Sum_probs=122.7
Q ss_pred HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069 293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY 372 (461)
Q Consensus 293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 372 (461)
++.++...+.+.+.+++.++.+++.+.++.+.||+. ....+..+.++.++..++....++++.+++.+++.|++.+..
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~--ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP--LSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC--hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 677888899999999999999999999999999965 333333444444444444445779999999999999999999
Q ss_pred HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc-----cCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS-----TLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~-----~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
+|....++..++++++++..+|+.+...++|+++|+.++..+... .-+|++.|++.+++.++..+++++
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 999999999999999999999999999999999999998876421 125999999999998887766553
No 228
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.98 E-value=4.4e-09 Score=98.96 Aligned_cols=175 Identities=14% Similarity=0.134 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT 346 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 346 (461)
+.......++..+........+|.+.+.++++..+++++...+..+..++++..|++.+|+|.|+-.++ ++.+++++.
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~l--gL~l~avg~ 92 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVL--GLLLYAVGA 92 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHH--HHHHHHHHH
Confidence 344455555555666666778888889999999999999999999999999999999999888887664 455555555
Q ss_pred HHhh---hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc------
Q psy15069 347 VICA---FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS------ 417 (461)
Q Consensus 347 ~~~~---~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~------ 417 (461)
.++. ...++..+....++.|.|.+........++..+.+++....-+++...+..+|.++||.+++.+.++
T Consensus 93 ~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 93 ALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 4443 3446777777889999999999999999999999988888999999999999999999999999873
Q ss_pred ------------cCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 418 ------------TLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 418 ------------~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
..+++.++...+.+.++.++.....+
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 22467777777777666666555443
No 229
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.97 E-value=1.1e-09 Score=103.89 Aligned_cols=143 Identities=13% Similarity=0.144 Sum_probs=116.3
Q ss_pred eeeeehHHHHhH---hcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHH
Q psy15069 6 SFGILFIEFTKV---FQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCIT 82 (461)
Q Consensus 6 ~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~ 82 (461)
+.+..++.+.+| +|.+..+.++..+.+..++.++.++.+++.||+|+|+++..+.++..++.++....++.+.++.
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~~- 236 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMWF- 236 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-
Confidence 344455666654 5899999999999999999999999999999999999998888888888776666555444443
Q ss_pred hhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHH
Q psy15069 83 IGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVT 151 (461)
Q Consensus 83 ~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~ 151 (461)
. ++.|++.+..+|...+...+.+|++.+.+.++. ....+|+.++|++.+.+.+.+|.+.+|++..+.
T Consensus 237 ~-~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 237 V-LALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 2 577899999999999888888888778888886 456689999999999999999999998744433
No 230
>KOG0254|consensus
Probab=98.90 E-value=2.3e-08 Score=101.99 Aligned_cols=143 Identities=16% Similarity=0.188 Sum_probs=118.2
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHH
Q psy15069 301 NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVIL 380 (461)
Q Consensus 301 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 380 (461)
+.+++.+...+++.+++++.|+++|++|||+.++ ++.+...++.++..++.+.+.+++.+++.|++.|....+.+.++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~--~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~ 167 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL--LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhH
Confidence 4489999999999999999999999977665544 56667777778888888999999999999999999999999999
Q ss_pred HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc-CCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069 381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST-LSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~-g~~~~~f~~~~~~~l~~~~~~~~~~~~~ 446 (461)
.|..|++.||...+.......+|..++ .+.|...++. .+|+..+.+..+.+++..+..+++++..
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999888888 4545555433 3599888888888777777755555433
No 231
>PRK09669 putative symporter YagG; Provisional
Probab=98.88 E-value=7.8e-09 Score=103.60 Aligned_cols=170 Identities=12% Similarity=0.093 Sum_probs=111.4
Q ss_pred HHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHHHHH
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~~~~ 344 (461)
..++.+..+.....+..+++.|+ +..|+++.++|.++++.-+...+..++.|+++|| +||||.+++ .+.+..++
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il-~~~~~~~i 92 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLL-WFAIPFGV 92 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHH-HHHHHHHH
Confidence 33444444444455567788887 8899999999999999999999999999999998 455555554 33333333
Q ss_pred HHHHhhhhh------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069 345 ATVICAFCY------NYVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS 417 (461)
Q Consensus 345 ~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~ 417 (461)
...+....+ ..++..+..++++.+.........++..|+. ++++|.+..+.......+|+.+++.+...+...
T Consensus 93 ~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 93 VCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI 172 (444)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322232 1344444555666666666666667888887 457788888888888888877776654443332
Q ss_pred cC------CchHHHHHHhHHHHHHHHHHH
Q psy15069 418 TL------SYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 418 ~g------~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.+ +|...+.+.+++.++..+.++
T Consensus 173 ~~~~~~~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 173 LGKGDEQKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 21 366666666666555554443
No 232
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.87 E-value=1.2e-08 Score=102.67 Aligned_cols=177 Identities=9% Similarity=0.055 Sum_probs=125.9
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCC---cchhHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPC---VNRLYIYNGCLA 340 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~---~~~~~~~~~~~~ 340 (461)
+...++...++.+... +.....++.++ +++|++.++.+...+...+...+ ++++|+++||++ +||++.+..+.+
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGL 103 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHH
Confidence 3444555567777777 66666777777 57899999999999999988886 556999999974 566666555555
Q ss_pred HH-HHHHHHhhhhhhHH-HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH---HHHHHHHHHhhhhhccceeeeee
Q psy15069 341 IC-GAATVICAFCYNYV-ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA---FGLLLLFQGIASLVGPPIAGFLY 415 (461)
Q Consensus 341 ~~-~~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~g~~~gp~i~g~l~ 415 (461)
+. .+....+...++.. ...+.+++.+++.+......-++..|..+ +++... ..+.....++|..+|+.++|.+.
T Consensus 104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 55 23333333334433 33346778888888888888899999988 544443 33444445589999999999999
Q ss_pred cccCCchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069 416 DSTLSYSPAFFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 416 ~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~ 445 (461)
+..+ |+..|++.+++.++..+..+++++.
T Consensus 183 ~~~~-~~~~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 183 DKTL-TRILFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred HhcC-cchHHHHHHHHHHHHHHHHHhcccc
Confidence 9874 9999999888887775555555443
No 233
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.86 E-value=4.2e-08 Score=91.11 Aligned_cols=158 Identities=14% Similarity=0.021 Sum_probs=132.2
Q ss_pred cccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069 281 FNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAI 360 (461)
Q Consensus 281 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (461)
...+.+.++.+-++.|+|.+.+|++.++.-++-.+.+++..++..|+|..|... .++++.+++.++=... +.+.++.
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~--~~Llli~~G~~iR~~~-~~~~L~~ 104 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLF--LALLLIAAGILIRSLG-GLPLLFL 104 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHH--HHHHHHHHHHHHHhcc-cHHHHHH
Confidence 345556666777899999999999999999999999999999999987776655 3444444444433223 6777888
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 361 YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 361 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
...+.|.+.+..+.+.++++.+.|| ++.+..+|++.+..++++++++.+.-.+.++.++|+..+.+-+...+++.+.++
T Consensus 105 gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 105 GTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred HHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999998 778999999999999999999999999999887899999999999988888776
Q ss_pred HH
Q psy15069 441 VI 442 (461)
Q Consensus 441 ~~ 442 (461)
.-
T Consensus 184 Pq 185 (395)
T COG2807 184 PQ 185 (395)
T ss_pred hh
Confidence 54
No 234
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.84 E-value=6e-09 Score=103.91 Aligned_cols=170 Identities=15% Similarity=0.095 Sum_probs=121.8
Q ss_pred HHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC----CCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 275 IFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISD----RPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
+...+.......+++.|+ +..|+++...+.+..+..+...+..++.|.++| |+||||.+++ .+....+++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l-~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWIL-IGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEee-hhhHHHHHHHHHh
Confidence 333444444555777776 777999999999999999999999999999999 6787666554 4444555555544
Q ss_pred hhh-h-------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHhhhhhccceeeeeecccC-
Q psy15069 350 AFC-Y-------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL- 419 (461)
Q Consensus 350 ~~~-~-------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g- 419 (461)
... + ...+..+..+++.++.........++..|+.+ +++|.+..+..+.+..+|..+...+.+.+.+..|
T Consensus 90 f~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~ 169 (428)
T PF13347_consen 90 FSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG 169 (428)
T ss_pred hccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 433 2 12234555566788888777777888899987 4689999999999989988777777777765544
Q ss_pred -----CchHHHHHHhHHHHHHHHHHHHHHHh
Q psy15069 420 -----SYSPAFFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 420 -----~~~~~f~~~~~~~l~~~~~~~~~~~~ 445 (461)
+|.....+.+++.++..+..++..++
T Consensus 170 ~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 170 GDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred CccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 47777777777777666655544333
No 235
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.82 E-value=1e-08 Score=102.43 Aligned_cols=161 Identities=14% Similarity=0.093 Sum_probs=133.4
Q ss_pred CCcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcc--eeeehhhHHHHHHHHHhhc------
Q psy15069 1 DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCR--NVTICGAILGSACLAVSVF------ 72 (461)
Q Consensus 1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r--~~~~~g~~~~~~~~~l~~~------ 72 (461)
||...........-.+++|++..++..+.-+..+...++..+.|++.||+|.| +++..+.+++.+..+...+
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~ 374 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSF 374 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34444445555666678999999999999999999999999999999999999 8888888877665555444
Q ss_pred --ccchhhHHHHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhhc-hhHHHHHH
Q psy15069 73 --AKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYG-WKITLLVL 148 (461)
Q Consensus 73 --~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~g-w~~~f~i~ 148 (461)
.++-|.+++. .++.|+..|...+...++..+..| ++.+...|++....-....++|.+.+.+.+..| -|+.+..+
T Consensus 375 ~g~~~~~~f~~~-a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l 453 (477)
T PF11700_consen 375 FGLKSPWEFWVL-AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFL 453 (477)
T ss_pred cCcccHHHHHHH-HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 5777888874 789999999999999999999886 677999999999999999999999999999876 89998888
Q ss_pred HHHHHHHHHHHhhc
Q psy15069 149 SVTVLSAVLFGILL 162 (461)
Q Consensus 149 ~~~~l~~~i~~~~~ 162 (461)
.++.++..++.++.
T Consensus 454 ~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 454 LVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHhhc
Confidence 88777766655443
No 236
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.81 E-value=2.9e-08 Score=100.31 Aligned_cols=171 Identities=10% Similarity=0.081 Sum_probs=113.7
Q ss_pred HHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHHHH
Q psy15069 269 LFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAICG 343 (461)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~~~ 343 (461)
...++.+..+.....+.+|++.|+ +..|+++..+|.++.+.-+...+..++.|+++|| +|++|.+++ .+....+
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il-~g~i~~~ 88 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWIL-IGTLANS 88 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHh-hhhHHHH
Confidence 344555555666666778888888 6679999999999999999999999999999994 477666554 3444445
Q ss_pred HHHHHhhhhh----h--HHHHHHHHHHHhhhhhhHHHHHHHHHHHhc-CccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069 344 AATVICAFCY----N--YVELAIYAGVFGAMIGAYVGLTSVILVDLL-GLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 344 ~~~~~~~~~~----~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
+.+.++...+ + .+++.+..+++++++........++..|+. ++++|.+..++...+.++|+.+.+.+...+.+
T Consensus 89 i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~ 168 (473)
T PRK10429 89 VVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN 168 (473)
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443332222 1 223444455677777777777888889988 57899999998777777776666554443322
Q ss_pred ccC------CchHHHHHHhHHHHHHHHHHH
Q psy15069 417 STL------SYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 417 ~~g------~~~~~f~~~~~~~l~~~~~~~ 440 (461)
..| .|.....+.+++.++..+.++
T Consensus 169 ~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~ 198 (473)
T PRK10429 169 YVGGGDRGFGFQMFTLVLIAFFIVSTIITL 198 (473)
T ss_pred HhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 222 245555555555444444433
No 237
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.78 E-value=1.4e-10 Score=116.42 Aligned_cols=145 Identities=17% Similarity=0.172 Sum_probs=118.2
Q ss_pred hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHhhhhhhHHHHH
Q psy15069 300 SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY---NYVELAIYAGVFGAMIGAYVGLT 376 (461)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~ 376 (461)
.+.++..+...++.++|.+++|+++||+|||+.++ .+.++..++.++..+++ +++.+.+.+++.|++.|...+..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALI--ISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccc
Confidence 45678889999999999999999999988776554 45556666677777788 88999999999999999999999
Q ss_pred HHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc--CCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069 377 SVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST--LSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 377 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~--g~~~~~f~~~~~~~l~~~~~~~~~~~~~ 446 (461)
..++.|..|+++|+...++.+....+|..++..+.-.+.+.. ..|+..+.+.++..++..+..+++|+..
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP 195 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESP 195 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999998888888877754443322 1499999888888877766666666543
No 238
>KOG0569|consensus
Probab=98.77 E-value=6.7e-08 Score=95.28 Aligned_cols=147 Identities=16% Similarity=0.126 Sum_probs=111.3
Q ss_pred hHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH-HHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHH
Q psy15069 302 ASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC-GAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVIL 380 (461)
Q Consensus 302 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 380 (461)
.+...+++.+++++|+++.++++||+|||....+.....+. ++........++...+++.+++.|+..+......+.++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34567778899999999999999998877544433333222 23333334456788899999999999999999999999
Q ss_pred HHhcCccchhHHHHHHHHHHHhhhhhccceee-eeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG-FLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g-~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
.|..|.+.||....+..+...+|..++..++. .+...-..|.+.+.+..+..++..++..++|+..|.
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~ 210 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKY 210 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcch
Confidence 99999999999999999999999888854433 333333358888888888888887777777665543
No 239
>KOG3810|consensus
Probab=98.74 E-value=4.9e-07 Score=83.20 Aligned_cols=348 Identities=12% Similarity=0.063 Sum_probs=217.2
Q ss_pred HhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHH-Hhhhhccchh
Q psy15069 34 GVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSV-TCYFERLRSL 112 (461)
Q Consensus 34 ~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~-~~~f~~~rg~ 112 (461)
-.+.+.-.+.=.+.|..-.|++++.-.+-.....++.-+.++++.+=+. -+..|...+.- .+-++.+ +.+-|+++-+
T Consensus 53 YSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvl-E~FyG~~tAaE-IAYysYIYs~Vd~~~Yqr 130 (433)
T KOG3810|consen 53 YSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVL-EFFYGPATAAE-IAYYSYIYSKVDPEMYKR 130 (433)
T ss_pred HHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeee-hhhcChHHHHH-HhhhheeeeecCHHHHHH
Confidence 3344555566678899999999999988888888888899999988764 57777765542 2222333 2233788999
Q ss_pred hhhhhccchhhhHHHHhHHHHHHHHhhchhHHHH-HHHHHHHHHHHHHhhcccCCCCCC-CCcccCCCCCcccccccccc
Q psy15069 113 ATGIAVCGSGLGTIIFAPIIDYTVREYGWKITLL-VLSVTVLSAVLFGILLRPLEEQPV-EEPVEDGALPHLRIIIFEVK 190 (461)
Q Consensus 113 a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~-i~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 190 (461)
+.|..-+..-.|-.++..++..++..-.+.+..+ .+...+..+.....+++|.+++.. .++..++..
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~----------- 199 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKIS----------- 199 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccce-----------
Confidence 9999999999999999999998887555544322 222222223333334445443111 111000000
Q ss_pred cccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhh--ccccccchhHH
Q psy15069 191 PKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREML--DMELLRDPIFI 268 (461)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~ 268 (461)
.++..+ . + ++.+. ....+....... -....+||+..
T Consensus 200 ------------------------v~~~e~--------~---~--~~~~~-----~~~l~~~~~~l~~~l~~~y~np~ll 237 (433)
T KOG3810|consen 200 ------------------------VGDLEE--------M---N--PQASY-----MSYLRGAFVLLWRDLQECYSNPRLL 237 (433)
T ss_pred ------------------------eccchh--------c---C--ccchh-----hHHHHHHHHHHHHHHHHHhcCchhh
Confidence 000000 0 0 00000 000111111110 01346777776
Q ss_pred HHHHHHHHHhhccccchhhHhhHHHHhCCCch--hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHH
Q psy15069 269 LFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS--NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAAT 346 (461)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~--~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 346 (461)
.-.+-..+..++++-+..|....-++..-.+. --|..=++..+.++++.+..|.+.-++.+.+..++.++.+.-+-++
T Consensus 238 ~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agll 317 (433)
T KOG3810|consen 238 KWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLL 317 (433)
T ss_pred hhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhh
Confidence 66666777777877777777666666531111 1233455667778888999999988765555667767766666677
Q ss_pred HHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC-------
Q psy15069 347 VICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL------- 419 (461)
Q Consensus 347 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g------- 419 (461)
+++..+.++|+.++..+++...+....++....+++....+..|...|+..+..-+-..+-..+ ..|..|
T Consensus 318 f~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~ 394 (433)
T KOG3810|consen 318 FIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRT 394 (433)
T ss_pred hhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcce
Confidence 7777888999999999999888888888888888888888999999999887766555444433 455332
Q ss_pred ---CchHHHHHHhHHHHHHHHHH
Q psy15069 420 ---SYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 420 ---~~~~~f~~~~~~~l~~~~~~ 439 (461)
-|..-|.+.+++.++.+...
T Consensus 395 Q~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 395 QFVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred eEEEEeehHHHHHHHHHHHHHHH
Confidence 25566777777777776553
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.73 E-value=6.1e-08 Score=91.97 Aligned_cols=157 Identities=13% Similarity=0.115 Sum_probs=125.8
Q ss_pred CCcceeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHH
Q psy15069 1 DGVTYSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLC 80 (461)
Q Consensus 1 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~ 80 (461)
||++..+..-...=..++|++..++.++.-..++....++++.|+|.||+|.|+++..+.++..+.++...+...-..+.
T Consensus 266 DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~ 345 (438)
T COG2270 266 DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFW 345 (438)
T ss_pred hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHH
Confidence 34433333333333558999999999999999999999999999999999999999999999999998877766655555
Q ss_pred HHhhccccccccccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh-chhHHHHHHHHHHHHHHHH
Q psy15069 81 ITIGFGTGLGFGLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY-GWKITLLVLSVTVLSAVLF 158 (461)
Q Consensus 81 i~~~~l~G~g~~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-gw~~~f~i~~~~~l~~~i~ 158 (461)
+ +..+.|...|.....+.++..+..| +|-++..|++....-.+...+|.+.+.+.+.. +-|..+..+.++.++..+.
T Consensus 346 i-~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 346 I-LGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred H-HHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 5 3688899999999999999999986 67799999999999999999999999988754 4676666665555444433
No 241
>PRK11462 putative transporter; Provisional
Probab=98.71 E-value=9.4e-08 Score=96.06 Aligned_cols=171 Identities=10% Similarity=0.079 Sum_probs=117.1
Q ss_pred HHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHHHHH
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAICGA 344 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~~~~ 344 (461)
..++.+..+.....+..|+..|+ +..|+++..+|.++.+.-+-..+.-|+.|+++|| +||+|.+++. +.+..++
T Consensus 14 Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~-g~i~~~i 92 (460)
T PRK11462 14 YGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLF-GALPFGI 92 (460)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhH-HHHHHHH
Confidence 34444445555566667788887 7789999999999999999999999999999996 4666666543 3334444
Q ss_pred HHHHhhhhhh------HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069 345 ATVICAFCYN------YVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS 417 (461)
Q Consensus 345 ~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~ 417 (461)
...++...++ .....+..+++.+++........++..|+.+ +++|.+..++......+|..+++.+...+...
T Consensus 93 ~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 93 VCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433332221 2334445566788888777777888888886 68899999999999998888877765555443
Q ss_pred cC------CchHHHHHHhHHHHHHHHHHHH
Q psy15069 418 TL------SYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 418 ~g------~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
.| +|.....+.+++.+++.+.++.
T Consensus 173 ~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 173 IGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 33 3555555555555554444433
No 242
>KOG2325|consensus
Probab=98.70 E-value=3e-07 Score=90.11 Aligned_cols=176 Identities=12% Similarity=0.120 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHH--hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQ--RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAIC 342 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 342 (461)
|..++..+..++....++.+.+-.-+|+++ .+-+.+..|++.+...++..++++++|++..|.+.-++.+ .++.+++
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl-i~s~ii~ 112 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL-IVSFLIA 112 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH-HHHHHHH
Confidence 346667777777777777777777778866 7888899999999999999999999999999965333333 3455555
Q ss_pred HHHHHHh---hhhh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee----ee
Q psy15069 343 GAATVIC---AFCY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA----GF 413 (461)
Q Consensus 343 ~~~~~~~---~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~----g~ 413 (461)
.++.++. ...+ ..+.+.+.+++.|++.+....+. .++++..-.++|.++++..+..+.+|.++||.+. +.
T Consensus 113 ~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR-~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 113 IIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLR-AYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHH-HHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 5554443 2222 56778888999999988655554 4566655567888888888887777777777553 22
Q ss_pred eec--------ccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 414 LYD--------STLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 414 l~~--------~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
..+ +...|..+-++.+++.++.+++.++.
T Consensus 192 g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~ 228 (488)
T KOG2325|consen 192 GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFF 228 (488)
T ss_pred cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhh
Confidence 221 12247788888888888777665544
No 243
>KOG0252|consensus
Probab=98.64 E-value=1.7e-08 Score=96.23 Aligned_cols=186 Identities=13% Similarity=0.127 Sum_probs=120.7
Q ss_pred ccchhHHHHHHHHHHHhhc---cccchhhHhhHHH----Hh----CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcc
Q psy15069 262 LRDPIFILFTISNIFTSIG---FNVPYVYIVKLAE----QR----GVTRSNASSLISIVGAANMVSRVILGYISDRPCVN 330 (461)
Q Consensus 262 l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~----g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~ 330 (461)
++.+.+-.+.++.+-.... ...+....|.+-. .. ++++...+.+.....++.++|++++|++.||+|||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 4555565555554433322 2333333333322 12 15667788888899999999999999999997766
Q ss_pred hhHHHHHHHHHHHHHHHHhhh--hh-h----HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhh
Q psy15069 331 RLYIYNGCLAICGAATVICAF--CY-N----YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIA 403 (461)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~--~~-~----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 403 (461)
+.. ...++++.++.++..+ .. + .+++...+++.|+|.|.-+|+..++..|....+.||+-.+.....++.|
T Consensus 115 ~vY--G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~G 192 (538)
T KOG0252|consen 115 KVY--GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFG 192 (538)
T ss_pred hhh--hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchh
Confidence 554 3444444444433333 22 1 3466778899999999999999999999999999999999988888887
Q ss_pred hhhccceeeeee---c-cc----------CCchHHHHHHhHHHHHHHHHHHHHHHhhHhH
Q psy15069 404 SLVGPPIAGFLY---D-ST----------LSYSPAFFLAGGAIFVSGVMLFVIPSLQSYL 449 (461)
Q Consensus 404 ~~~gp~i~g~l~---~-~~----------g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~ 449 (461)
...|.+++-.+. + .. +-||..|.+..+..++....-+.++..++.+
T Consensus 193 ilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 193 ILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYT 252 (538)
T ss_pred HhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHH
Confidence 777765543332 1 11 1277777666665555544444445555444
No 244
>KOG0637|consensus
Probab=98.64 E-value=1.1e-07 Score=90.67 Aligned_cols=365 Identities=13% Similarity=0.036 Sum_probs=197.0
Q ss_pred ehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh----hcCccee-eehhhHHHHHHHHHhhcccchhhHHHH--
Q psy15069 10 LFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN----KYGCRNV-TICGAILGSACLAVSVFAKNVITLCIT-- 82 (461)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~G~r~~-~~~g~~~~~~~~~l~~~~~~~~~l~i~-- 82 (461)
+.|++...+|++....+.+--+.=+...+.||+.|...| |+||||- +.++..+..++.++..++.++..++.-
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~ 133 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNE 133 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCc
Confidence 567888999999999998888877777788999999999 6898655 777888888888888887544322110
Q ss_pred ---------hhcccc-----ccccccchhHHHHHHhhh-hccc-hhhhhhhccchhhhHHHHhHHHHHHHHhhchhHH--
Q psy15069 83 ---------IGFGTG-----LGFGLIYLPAIVSVTCYF-ERLR-SLATGIAVCGSGLGTIIFAPIIDYTVREYGWKIT-- 144 (461)
Q Consensus 83 ---------~~~l~G-----~g~~~~~~~~~~~~~~~f-~~~r-g~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~-- 144 (461)
.-++.| +..-....++-+.+.+.. ++++ -+|+++.....++|.+++-.++++ .||+-.
T Consensus 134 ~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y----~~~~~~~~ 209 (498)
T KOG0637|consen 134 RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSY----LGLYKIFP 209 (498)
T ss_pred ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccc----cCceEEee
Confidence 002223 333355667777888877 3333 239999988888888888777663 355433
Q ss_pred HHHHHHHHHHHHH---HHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCCcccCCcc
Q psy15069 145 LLVLSVTVLSAVL---FGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQ 221 (461)
Q Consensus 145 f~i~~~~~l~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (461)
|...-...+.+.- +...-.+..+....+... ...+++++
T Consensus 210 Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~-~~~~~~~s------------------------------------- 251 (498)
T KOG0637|consen 210 FTLTTACDLYCANLKLCFFLEVTLLLIETSESLW-YPQEKPLS------------------------------------- 251 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhheecccccc-cccccCCC-------------------------------------
Confidence 2222222111111 111100100000000000 00000000
Q ss_pred ccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHH-HH-hCCCc
Q psy15069 222 AQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQ-RGVTR 299 (461)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~s~ 299 (461)
+++...+. +..+ .....+.+..-....|..+.+++...+..++...+..|-.+++ ++ ++-++
T Consensus 252 ~~~~~~~~--~~~~--------------~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp 315 (498)
T KOG0637|consen 252 PKGTTARS--KSSK--------------LPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDP 315 (498)
T ss_pred CCcccccc--cccC--------------cchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCC
Confidence 00000000 0000 0011111111112345677788888888887777776666666 32 22111
Q ss_pred h----------------hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q psy15069 300 S----------------NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAG 363 (461)
Q Consensus 300 ~----------------~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (461)
. .-.+=+.++.+...+.+...-++.+|+|-|+++......+ ++...+.....+.++......
T Consensus 316 ~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f--~~~~~~~gl~~~~~~~~~~~~ 393 (498)
T KOG0637|consen 316 KADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAF--GLATGLAGLVLNTYVVLSHRS 393 (498)
T ss_pred CCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHH--HHHHHHHhhhhhHHHHHHHHh
Confidence 1 1223344566777778889999999998555443322212 222222333444455544555
Q ss_pred HHhhhhhhHHHHHHHHHHHhc---------------------C--ccchhHHHHHHHHHHHhhhhhccceeeeeecccCC
Q psy15069 364 VFGAMIGAYVGLTSVILVDLL---------------------G--LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLS 420 (461)
Q Consensus 364 l~g~~~~~~~~~~~~~~~~~~---------------------~--~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~ 420 (461)
..|+-.+......+..+.... . ...+|...|+.|....+..++.....|.+.|..|+
T Consensus 394 ~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~ 473 (498)
T KOG0637|consen 394 TAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGG 473 (498)
T ss_pred hcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCC
Confidence 555444433333333222210 1 12246667888888899999998888999998876
Q ss_pred chHHHHHHhHHHHH
Q psy15069 421 YSPAFFLAGGAIFV 434 (461)
Q Consensus 421 ~~~~f~~~~~~~l~ 434 (461)
-+.+-...++..++
T Consensus 474 ~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 474 GNLPAFVSGAVALL 487 (498)
T ss_pred cchhHHHHHHHHHH
Confidence 66555444444443
No 245
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.58 E-value=7.7e-07 Score=80.54 Aligned_cols=163 Identities=13% Similarity=0.068 Sum_probs=110.3
Q ss_pred HhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh--h--
Q psy15069 277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF--C-- 352 (461)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 352 (461)
.....|.+..|-|..-+++|+|+++...+.+...++..+| ++.|.+.||++ +...+.++.+...++...... .
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~g--p~~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFG--PWVVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3445688888999988999999999999999989998765 88999999954 444444454444444333322 1
Q ss_pred ---hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHh
Q psy15069 353 ---YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAG 429 (461)
Q Consensus 353 ---~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~ 429 (461)
.+.|.+.+..++.|.+.............+.|| ++||++.|+.-...++++++-..+...+.+. +....+.+.+
T Consensus 91 i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~--~~~~fll~la 167 (250)
T PF06813_consen 91 IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD--DPSSFLLFLA 167 (250)
T ss_pred cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC--ChHHHHHHHH
Confidence 245666666666666665555555556678898 6899999999999999988877776666553 3344444444
Q ss_pred HHHH-HHHHHHHHHHHh
Q psy15069 430 GAIF-VSGVMLFVIPSL 445 (461)
Q Consensus 430 ~~~l-~~~~~~~~~~~~ 445 (461)
.... ++.+..++++..
T Consensus 168 ~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 168 VLPAVVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHHHHHhhheecc
Confidence 4433 333444444444
No 246
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.51 E-value=5.9e-07 Score=84.32 Aligned_cols=145 Identities=19% Similarity=0.242 Sum_probs=116.0
Q ss_pred eehHHHHhHhcCCC--ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccc--hhhHHHHhh
Q psy15069 9 ILFIEFTKVFQEGD--GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKN--VITLCITIG 84 (461)
Q Consensus 9 ~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~--~~~l~i~~~ 84 (461)
...+.+..+++.+. ...+++.+.+.+...+++++.|.+.||+|||+.+..+.....++.++..+..+ .+.+++ .|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 101 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLI-LR 101 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHH-HH
Confidence 35666677777766 58999999999999999999999999999998888888766666666767666 677776 48
Q ss_pred ccccccccccchhHHHHHHhhhhc--cchhhhhhhcc-chhhhHHHHhHHHHHHHHh--hchhHHHHHHHHHHHH
Q psy15069 85 FGTGLGFGLIYLPAIVSVTCYFER--LRSLATGIAVC-GSGLGTIIFAPIIDYTVRE--YGWKITLLVLSVTVLS 154 (461)
Q Consensus 85 ~l~G~g~~~~~~~~~~~~~~~f~~--~rg~a~gi~~~-~~~lg~~i~~~l~~~l~~~--~gw~~~f~i~~~~~l~ 154 (461)
+..|++.+...+....++.+++|+ +|+...++... ...+|.+++|.+++.+... .+||..|.+.......
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 102 LLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 889999998888899999999985 88999998888 5888888888777766653 5899966666555443
No 247
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.51 E-value=3.6e-06 Score=87.21 Aligned_cols=154 Identities=15% Similarity=0.074 Sum_probs=123.3
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh-hcCcceeeehhhHHHHHHHHHhhcccc--------hhhH
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN-KYGCRNVTICGAILGSACLAVSVFAKN--------VITL 79 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~G~r~~~~~g~~~~~~~~~l~~~~~~--------~~~l 79 (461)
++..++.+.+|.+.+....++..+.....+...+.|.++| ++|+++.+..+.++..++..+.++... ....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 4566778889999999999999998888899999999999 689999999999999999988776421 1123
Q ss_pred HHHhhccccccccccchhHHHHHHhhhh-c---cchhhhhhhccchhhhHHHHhHHHHHHHHhh-------chhHHHHHH
Q psy15069 80 CITIGFGTGLGFGLIYLPAIVSVTCYFE-R---LRSLATGIAVCGSGLGTIIFAPIIDYTVREY-------GWKITLLVL 148 (461)
Q Consensus 80 ~i~~~~l~G~g~~~~~~~~~~~~~~~f~-~---~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~-------gw~~~f~i~ 148 (461)
++++ .+.++|.|.+-++..+...+-++ + +|.....+.+.+.++|.++++++...+.+.+ +|...|.+.
T Consensus 89 l~gL-aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~ 167 (654)
T TIGR00926 89 LLGL-ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVP 167 (654)
T ss_pred HHHH-HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHH
Confidence 3332 56678888888888888888773 2 3677889999999999999999999887544 699999999
Q ss_pred HHHHHHHHHHHhhcc
Q psy15069 149 SVTVLSAVLFGILLR 163 (461)
Q Consensus 149 ~~~~l~~~i~~~~~~ 163 (461)
++.+++..+..+..+
T Consensus 168 ~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 168 AILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHHhc
Confidence 998888776655543
No 248
>PRK09848 glucuronide transporter; Provisional
Probab=98.50 E-value=9.1e-07 Score=88.82 Aligned_cols=145 Identities=12% Similarity=0.134 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC----CcchhHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP----CVNRLYIYNGCLAIC 342 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----~~~~~~~~~~~~~~~ 342 (461)
+...++.+...........+++.|+ +..|++..++|.+.++..+...+..++.|+++||. |+||.++...+....
T Consensus 11 ~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~ 90 (448)
T PRK09848 11 VGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLM 90 (448)
T ss_pred HhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHH
Confidence 3344455555555556667777788 56799999999999999999999999999999996 444444333322222
Q ss_pred HHHHHHhhh----hh--hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHH-----Hhhhhhccce
Q psy15069 343 GAATVICAF----CY--NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQ-----GIASLVGPPI 410 (461)
Q Consensus 343 ~~~~~~~~~----~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~-----~~g~~~gp~i 410 (461)
..+.+++.. .. ..+.......+.+++.+...+...++..++.. +++|.+..+...... .++..++|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i 170 (448)
T PRK09848 91 IFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSI 170 (448)
T ss_pred HHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222211 11 12233344456777777777666666666654 356777666554332 2445556665
Q ss_pred ee
Q psy15069 411 AG 412 (461)
Q Consensus 411 ~g 412 (461)
.+
T Consensus 171 ~~ 172 (448)
T PRK09848 171 KN 172 (448)
T ss_pred HH
Confidence 54
No 249
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.49 E-value=2.1e-06 Score=81.81 Aligned_cols=155 Identities=17% Similarity=0.116 Sum_probs=108.6
Q ss_pred HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCC----cchhHHHHHHHHHHHHHHHHhhh-----hh-------hH-
Q psy15069 293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPC----VNRLYIYNGCLAICGAATVICAF-----CY-------NY- 355 (461)
Q Consensus 293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~-------~~- 355 (461)
.|++++....+.+.+...+... .++.+|+.+|+.+ .||...+..+.+....+..+.++ .. +.
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~ 86 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFW 86 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccH
Confidence 7899999999999888888776 6999999999853 35555555555554444433332 12 11
Q ss_pred -H--HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHH
Q psy15069 356 -V--ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAI 432 (461)
Q Consensus 356 -~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~ 432 (461)
+ ...+.+.++|++.+.......+++.|..|+++|+++.++...+.-+|.+++..+.|.+.|.. +..-..-+.....
T Consensus 87 ~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~-s~~rL~~v~~~~a 165 (403)
T PF03209_consen 87 LGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF-SPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc-CHHHHHHHHHHHH
Confidence 1 23345678899999888999999999999999999999999999999999999999998865 3433333333333
Q ss_pred HHHHHH-HHHHHHhhHhH
Q psy15069 433 FVSGVM-LFVIPSLQSYL 449 (461)
Q Consensus 433 l~~~~~-~~~~~~~~~~~ 449 (461)
++...+ ...+.+.+++.
T Consensus 166 ~i~~~l~~ia~wg~E~r~ 183 (403)
T PF03209_consen 166 LIALLLNLIALWGQEPRR 183 (403)
T ss_pred HHHHHHHHHHHHhcccCC
Confidence 333333 33334444333
No 250
>KOG3574|consensus
Probab=98.48 E-value=4.2e-06 Score=78.13 Aligned_cols=332 Identities=11% Similarity=0.028 Sum_probs=184.4
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhh-----hcCccee-eehhhHHHHHHHHHhhcc---------
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVN-----KYGCRNV-TICGAILGSACLAVSVFA--------- 73 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~G~r~~-~~~g~~~~~~~~~l~~~~--------- 73 (461)
-..|.+.+.=|.|.++.+ ++|.....+.+ -+...+++| |+||||. ++-+..+.+..+++.+..
T Consensus 51 ~~iP~lL~ak~vSyt~~a-~fS~ay~P~sL-KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng 128 (510)
T KOG3574|consen 51 GAIPLLLQAKGVSYTSQA-IFSFAYWPFSL-KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNG 128 (510)
T ss_pred hhhHHHhcCCCcchhhhh-hhhhhhhHHHH-HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCC
Confidence 367888887888888888 56666666643 667888888 9999887 333334433333333322
Q ss_pred --cchhhHHHHhhccccccccccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH-----hh--chh-
Q psy15069 74 --KNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-----EY--GWK- 142 (461)
Q Consensus 74 --~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-----~~--gw~- 142 (461)
++...+...+ ++.=+..++-..+.-.+.-... |++.|-|......|...|.+++..+.-.+-. +| +|.
T Consensus 129 ~~p~v~~lt~~f-~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~ 207 (510)
T KOG3574|consen 129 GLPNVVALTLLF-LLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPL 207 (510)
T ss_pred CCcchHHHHHHH-HHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcC
Confidence 2222332222 3334444544444433333333 6788888887777878887776554333221 11 232
Q ss_pred --------HHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcccccccccccccccccccccccCCCCCcCCCCC
Q psy15069 143 --------ITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHLRIIIFEVKPKQRALTAVSTSIWQPSTAISTGP 214 (461)
Q Consensus 143 --------~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (461)
..+++.|.+.++.-.+..+...+++...+|+.
T Consensus 208 ~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~---------------------------------------- 247 (510)
T KOG3574|consen 208 DQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEEL---------------------------------------- 247 (510)
T ss_pred ccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhh----------------------------------------
Confidence 34556666666555544444322211100000
Q ss_pred cccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccccchhHHHHHHHHHHHhhccccchhhHhhHHHH
Q psy15069 215 TEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQ 294 (461)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (461)
|. ...+..+.+. +.++-|....++......-.++.+-....+.-+-|
T Consensus 248 --------------------~~--------~i~~~yk~l~-----~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle 294 (510)
T KOG3574|consen 248 --------------------EL--------GIHESYKLLR-----DVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE 294 (510)
T ss_pred --------------------hc--------CHHHHHHHHH-----HHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH
Confidence 00 0011112222 34555655555555555556666666677777789
Q ss_pred hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchh------HHHHHHHHHHH-HHHHHhhhh-h-------hHHHHH
Q psy15069 295 RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRL------YIYNGCLAICG-AATVICAFC-Y-------NYVELA 359 (461)
Q Consensus 295 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~------~~~~~~~~~~~-~~~~~~~~~-~-------~~~~~~ 359 (461)
.|++..+.+++..+.--.+++.....|++..+ .++. ..+-+...... +.....+.. . .+..+.
T Consensus 295 ~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~ 372 (510)
T KOG3574|consen 295 HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILL 372 (510)
T ss_pred cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHH
Confidence 99999998887655555566666666666653 2221 11212222222 222222211 1 122222
Q ss_pred H-HHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069 360 I-YAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418 (461)
Q Consensus 360 ~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~ 418 (461)
+ .-.+.+......+...++..+++.++.--|+.+.+.|+..++|+--=..+++++.|..
T Consensus 373 i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 373 ITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 2 2244555555566667778899999999999999999999999887777777777753
No 251
>KOG3762|consensus
Probab=98.45 E-value=7.4e-07 Score=86.85 Aligned_cols=148 Identities=17% Similarity=0.163 Sum_probs=125.9
Q ss_pred HhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069 15 TKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI 94 (461)
Q Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~ 94 (461)
.+|.+-.+.-.|.+-.+...+=.+.=++++++++|+|+-+++..++.+..+=++..++..|.|..+. +-+++|+-.+.+
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLP-ieilqgit~ali 476 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLP-IEILQGITHALI 476 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheee-HHHHHHHHHHHH
Confidence 5677777777886666666666777888999999999999999999999999999999999999998 489999999999
Q ss_pred chhHHHHHHhhh-hccchhhhhhhccc-hhhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhcc
Q psy15069 95 YLPAIVSVTCYF-ERLRSLATGIAVCG-SGLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLR 163 (461)
Q Consensus 95 ~~~~~~~~~~~f-~~~rg~a~gi~~~~-~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~ 163 (461)
|.+..+++++.. |+-|..+-++.+.. .++|--+|..|++.+.+.+|-|.+|.+.++.+++..++.....
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999988 46688887777653 6677777888889999999999999999999998876655543
No 252
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.36 E-value=6.9e-06 Score=77.11 Aligned_cols=165 Identities=15% Similarity=0.090 Sum_probs=110.3
Q ss_pred HhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHH
Q psy15069 277 TSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYV 356 (461)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (461)
...+-+.-.+|+-...+++|++..+++.++....+...+..++.|.++||+|+|+.-+ ..+++.+++.+ .-..++++
T Consensus 46 a~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl--~~cily~~scl-~k~~~~~~ 122 (354)
T PF05631_consen 46 AMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACL--LFCILYSLSCL-TKHSSNYP 122 (354)
T ss_pred HHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHH--HHHHHHHHHHH-HHhccccH
Confidence 3444444445554555889999999999999999999999999999999988666544 33444444443 34567899
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHH-HHHh----cCccchhHHHHHHHH-HHHhhhhhccceeeeeecccC-CchHHHHHHh
Q psy15069 357 ELAIYAGVFGAMIGAYVGLTSVI-LVDL----LGLDRLTNAFGLLLL-FQGIASLVGPPIAGFLYDSTL-SYSPAFFLAG 429 (461)
Q Consensus 357 ~~~~~~~l~g~~~~~~~~~~~~~-~~~~----~~~~~~~~~~g~~~~-~~~~g~~~gp~i~g~l~~~~g-~~~~~f~~~~ 429 (461)
.+++.+++-|++....+...-+. +.|. +|++..+...+.... ..++-.+.+..++-++.|..+ +...+|....
T Consensus 123 ~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~ 202 (354)
T PF05631_consen 123 VLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAI 202 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHH
Confidence 99999999999999888887764 3443 343434444444432 223334445555556666654 2467888877
Q ss_pred HHHHHHHHHHHHHHH
Q psy15069 430 GAIFVSGVMLFVIPS 444 (461)
Q Consensus 430 ~~~l~~~~~~~~~~~ 444 (461)
.+.+++.++....++
T Consensus 203 ~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 203 VLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHhccc
Confidence 777777665544333
No 253
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.35 E-value=8.3e-05 Score=72.47 Aligned_cols=155 Identities=15% Similarity=0.089 Sum_probs=94.3
Q ss_pred ccccchhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcch--------
Q psy15069 260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNR-------- 331 (461)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-------- 331 (461)
+++|.|.+..+.+..+..-.++..--.....-+-+.|++.++.+.+..+..-.+++..+..|+++.- .++
T Consensus 273 ~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g--~~P~~~~~~~l 350 (544)
T PF13000_consen 273 KILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSAG--SPPLDVDNKAL 350 (544)
T ss_pred HHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcC--CCccccccccc
Confidence 4678888877777777777887777777777778999999998887666555555555555555442 221
Q ss_pred -------------------hHHHHHHHH---HHHH-HHHHhhhhh-------hHHHHHHHH-HHHhhhhhhHHHHHHHHH
Q psy15069 332 -------------------LYIYNGCLA---ICGA-ATVICAFCY-------NYVELAIYA-GVFGAMIGAYVGLTSVIL 380 (461)
Q Consensus 332 -------------------~~~~~~~~~---~~~~-~~~~~~~~~-------~~~~~~~~~-~l~g~~~~~~~~~~~~~~ 380 (461)
......++. +.++ ..+.....+ .+..+++.. ++.-+.....+....+.-
T Consensus 351 ~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFh 430 (544)
T PF13000_consen 351 PNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFH 430 (544)
T ss_pred cccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111111 1111 111111111 122222222 344455556777777888
Q ss_pred HHhcCccchhHHHHHHHHHHHhhhhhccceeeeeec
Q psy15069 381 VDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 381 ~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
+++.+|.-=|+.+.+.|+..++|+---..+.=++.|
T Consensus 431 arISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 431 ARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred hhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 999999999999999999999997655544444444
No 254
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.33 E-value=3.4e-06 Score=82.60 Aligned_cols=173 Identities=11% Similarity=0.124 Sum_probs=117.6
Q ss_pred HHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC----CcchhHHHHHHHHHH
Q psy15069 268 ILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP----CVNRLYIYNGCLAIC 342 (461)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----~~~~~~~~~~~~~~~ 342 (461)
.....+.+..+........|+..|+ +..|+++..+|.++.+.=+...+.-|+.|.+.||. |++|-+++ .+.+..
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL-~g~ip~ 93 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLL-WGAIPF 93 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHH-HHhHHH
Confidence 3345555556666667778888888 78899999999999999999999999999999964 54455544 333333
Q ss_pred HHHHHHhhhhh------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC-ccchhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069 343 GAATVICAFCY------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLG-LDRLTNAFGLLLLFQGIASLVGPPIAGFLY 415 (461)
Q Consensus 343 ~~~~~~~~~~~------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~ 415 (461)
++...+...++ +.....+.-.++++++........++..++.+ +++|.+..+.-..+..+|..+-..+.+.+.
T Consensus 94 ~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 94 AIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred HHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333333333 23344455678888888877777788888875 578999999999999998777666666555
Q ss_pred cccC------CchHHHHHHhHHHHHHHHHHHH
Q psy15069 416 DSTL------SYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 416 ~~~g------~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
...| +|...-.+.+++.++..+.++.
T Consensus 174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~ 205 (467)
T COG2211 174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFF 205 (467)
T ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4332 2444444444444444444443
No 255
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.31 E-value=8.8e-06 Score=80.94 Aligned_cols=151 Identities=13% Similarity=0.099 Sum_probs=112.8
Q ss_pred HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCC---CcchhHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHH
Q psy15069 293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRP---CVNRLYIYNGCLAICGAATVICAFC----YNYVELAIYAGVF 365 (461)
Q Consensus 293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~ 365 (461)
+++|+++.+.....+...+.-. .+++.|.++|-+ |.||+..+.++.++..+..+.+... .+.....++.++.
T Consensus 18 ~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la 96 (433)
T PF03092_consen 18 DDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLA 96 (433)
T ss_pred HHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHH
Confidence 7899999999888777777665 788999999974 6778777666666664444433332 2455556666777
Q ss_pred hhhhhhHHHHHHHHHHHhcC--ccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 366 GAMIGAYVGLTSVILVDLLG--LDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 366 g~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
.++........-+++.|... ++.+|...+.......+|++++..+.|.+.+.. +++..|.+.+.+.++..+..+++.
T Consensus 97 ~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 97 SFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLL 175 (433)
T ss_pred HHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhh
Confidence 78888888888888877763 234778888888899999999999999999986 588888888877777766555554
Q ss_pred Hh
Q psy15069 444 SL 445 (461)
Q Consensus 444 ~~ 445 (461)
++
T Consensus 176 ~e 177 (433)
T PF03092_consen 176 EE 177 (433)
T ss_pred hh
Confidence 43
No 256
>KOG0253|consensus
Probab=98.31 E-value=2.9e-06 Score=79.04 Aligned_cols=151 Identities=16% Similarity=0.201 Sum_probs=120.7
Q ss_pred HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhH
Q psy15069 293 EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAY 372 (461)
Q Consensus 293 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 372 (461)
...|.+..+.+++......+..+++..+|.++|++|+|+.. ...+...++.-.+....+++.++.++..+.|++.|.
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f--~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg- 182 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGF--NLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG- 182 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhh--hhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-
Confidence 56789999999999999999999999999999997766543 345555566666677788999999999999999998
Q ss_pred HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
.|...++-.|..|..+|..-.=+. ....+|.++...++=..+...| |++..........+.+.+++.+++..|.
T Consensus 183 ~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g-wr~~l~~~~~pl~~~a~f~~w~~ESpRf 256 (528)
T KOG0253|consen 183 LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG-WRYLLFTSSTPLMFAARFLVWVYESPRF 256 (528)
T ss_pred ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHhHHHHHHHHHhhcccCcch
Confidence 888888889999988888766665 7778888887777655666665 9999888888777777777776655443
No 257
>KOG4686|consensus
Probab=98.31 E-value=1.3e-06 Score=78.24 Aligned_cols=140 Identities=18% Similarity=0.179 Sum_probs=94.8
Q ss_pred HHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhh-HHHHHHHHHhhcccchhhHHHHhhccccccc
Q psy15069 13 EFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGA-ILGSACLAVSVFAKNVITLCITIGFGTGLGF 91 (461)
Q Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~-~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~ 91 (461)
.+++++|+|+...+-+.|.-.......+|+.|.+.||+|++...+++. +...++-.+..|. ++.-+.. ..+.|+..
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~-m~~lGLsy 366 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTS-MTFLGLSY 366 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHH-HHHHhhhH
Confidence 468899999999999999999999999999999999999998765544 4444444444443 2222222 23344443
Q ss_pred cccchhHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHHhh---chhHHHH-HHHHHHHHH
Q psy15069 92 GLIYLPAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVREY---GWKITLL-VLSVTVLSA 155 (461)
Q Consensus 92 ~~~~~~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~---gw~~~f~-i~~~~~l~~ 155 (461)
+.....-...+....| ++.|.+.|..++..++|-.+.|.+++.+.+.- .|--.|+ +++.+.+..
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~s 435 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTS 435 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHH
Confidence 3322212223333344 67899999999999999999999999998753 3544444 444444443
No 258
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.29 E-value=3.7e-06 Score=87.20 Aligned_cols=162 Identities=12% Similarity=0.049 Sum_probs=118.6
Q ss_pred ccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhh-----
Q psy15069 280 GFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCY----- 353 (461)
Q Consensus 280 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 353 (461)
++|++...+..|+ +.+|++...+..++..+....-+...++|+++|++ .++...+..+.++..++..++.+..
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~-lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW-LGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 5667777777777 67899999999999988888888999999999984 2333333334444444444433321
Q ss_pred ---hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc---chhHHHHHHHHHHHhhhhhccceeeeeeccc---C---Cc
Q psy15069 354 ---NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLD---RLTNAFGLLLLFQGIASLVGPPIAGFLYDST---L---SY 421 (461)
Q Consensus 354 ---~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~---g---~~ 421 (461)
.....++...+..+|.|..-|...+...|.++++ ++.+.+.+...+.++|+.+++++.+++.+.. | +|
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~ 160 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCY 160 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcch
Confidence 1223456677788889999999999999998754 4777889999999999999999999887443 2 48
Q ss_pred hHHHHHHhHHHHHHHHHHHHH
Q psy15069 422 SPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 422 ~~~f~~~~~~~l~~~~~~~~~ 442 (461)
...|.+.+++.+++.++...-
T Consensus 161 ~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 161 PLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 889988888888877766543
No 259
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.28 E-value=0.00017 Score=71.71 Aligned_cols=114 Identities=9% Similarity=-0.040 Sum_probs=82.3
Q ss_pred ccHHHHHHHHHHhhhhh-hHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc----cc----------------------
Q psy15069 23 GVTSWIASILVGVTLCS-GPISSAFVNKYGCRNVTICGAILGSACLAVSVFA----KN---------------------- 75 (461)
Q Consensus 23 ~~~~~~~s~~~~~~~~~-~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~----~~---------------------- 75 (461)
..+.++.+...+.+.+. .++.+.+.+|++|+++.-.....+.+.+.+.++. ++
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 57999999888877666 9999999999999999888888877777776554 11
Q ss_pred -----hhhHHHHhhccccccccccch-hHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH
Q psy15069 76 -----VITLCITIGFGTGLGFGLIYL-PAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR 137 (461)
Q Consensus 76 -----~~~l~i~~~~l~G~g~~~~~~-~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~ 137 (461)
.|...+.+ +...+-...+.. .-...++|.+ +++-.|-.++...+.++|.++++.+..++.+
T Consensus 123 i~~~~~W~~~~FY-v~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 123 IAILRIWSFALFY-VMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12111111 222332222222 3346778877 5778889999999999999999999998873
No 260
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.25 E-value=7.1e-07 Score=65.51 Aligned_cols=76 Identities=13% Similarity=0.077 Sum_probs=71.4
Q ss_pred eeeeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHH
Q psy15069 5 YSFGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLC 80 (461)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~ 80 (461)
.+|..++|.|++|.++|.++.|++.+.++++|.++.+...++.++..+++++..+.+...++++.+++.++++.+.
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 5678899999999999999999999999999999999999999999999999999999999999999999887654
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.21 E-value=2e-06 Score=62.64 Aligned_cols=66 Identities=14% Similarity=0.236 Sum_probs=58.0
Q ss_pred HHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH
Q psy15069 269 LFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI 334 (461)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~ 334 (461)
.+-..+++.+.+...+.+++|.|+++.|+++.++|.+.++..+..+++.+++|+++||.++++..+
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l 69 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVIL 69 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHH
Confidence 355667778888889999999999999999999999999999999999999999999986655544
No 262
>KOG3880|consensus
Probab=98.17 E-value=3.9e-05 Score=69.69 Aligned_cols=325 Identities=13% Similarity=0.041 Sum_probs=175.2
Q ss_pred HHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHh
Q psy15069 25 TSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTC 104 (461)
Q Consensus 25 ~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~ 104 (461)
+|.+.-.-.+...+..+.+....||+.--.=.....++.+.++.+.+++++.++-++.. .+..++.|..-..-..+ +.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV-~~aSissGlGEiTFL~l-ss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGV-VFASISSGLGEITFLAL-SS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhh-hhhhhcCCcceeehhhh-hc
Confidence 66777777888888888888889988765556677788888999999999988877642 55666666543333232 22
Q ss_pred hhhccchhhhhhhccchhhhHHHHhHHHHHHHHh--hchhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCCCCcc
Q psy15069 105 YFERLRSLATGIAVCGSGLGTIIFAPIIDYTVRE--YGWKITLLVLSVTVLSAVLFGILLRPLEEQPVEEPVEDGALPHL 182 (461)
Q Consensus 105 ~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~--~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (461)
++......-+.+|.+.++++|..--..+.+. ..-|.+.++.-.+.++..+.-+++++.++.... +. ..|+.
T Consensus 142 ---~Y~~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~--pt--l~~~~ 214 (409)
T KOG3880|consen 142 ---RYPSIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYS--PT--LQPST 214 (409)
T ss_pred ---cCCCceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccC--CC--cCccc
Confidence 2334455667788888888887766666653 356888888777766666665565555433221 00 00000
Q ss_pred cccccccccccccccccccccCCCCCcCCCCCcccCCccccccccCCCCCCCCcccccccccCCchhhhhHhhhhccccc
Q psy15069 183 RIIIFEVKPKQRALTAVSTSIWQPSTAISTGPTEVISTQAQIDSKATVPESESTEDKTTCLNLSDDTKQTLREMLDMELL 262 (461)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 262 (461)
+ ..+++ .+..|..++++-.+.....+.+++.+ ++++
T Consensus 215 ------------~---------------------~~~~~---------~~~~~a~e~~sv~s~~~~~~e~~~~i--~pll 250 (409)
T KOG3880|consen 215 ------------E---------------------IIPSQ---------YLPFEAAEEKSVPSRRLGLKETLKRI--KPLL 250 (409)
T ss_pred ------------e---------------------eccCC---------CCcccccccccCchhhhcHHHHHHHH--HHHH
Confidence 0 00000 00000000000000001111222111 0112
Q ss_pred cchhHHHHHHHHHHHhhccccchhhHhhHH-H-HhCCC--c-hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHH--
Q psy15069 263 RDPIFILFTISNIFTSIGFNVPYVYIVKLA-E-QRGVT--R-SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIY-- 335 (461)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~s--~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-- 335 (461)
+ ...-+...++.-++..-+ ..+..+ . ..|.+ . .|.-|....+.++.++.|--.-. .. .+..+.+
T Consensus 251 ~--~MvPL~~VY~~EY~INQG---l~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSRSS~~~-~~---~p~l~~Lai 321 (409)
T KOG3880|consen 251 K--YMVPLALVYFAEYFINQG---LAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISRSSINL-FT---MPYLWLLAI 321 (409)
T ss_pred H--HHHHHHHHHHHHHHHhhh---hHhhEEeccccCCccchhhcchhhheeeeeeEEEEeccceE-Ee---chHHHHHHH
Confidence 1 112233333333333222 222222 1 23332 2 23556666777776665532111 11 1222221
Q ss_pred -HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069 336 -NGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA 411 (461)
Q Consensus 336 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~ 411 (461)
...-++..+.-.++.+++++|...+..+.-|+..|..+....--+.+-.++++|--+++.....-.+|-.++..++
T Consensus 322 lQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 322 LQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 1111222223344556788888888888899988887777777777777889999999988777666666655543
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.10 E-value=5.5e-07 Score=91.48 Aligned_cols=178 Identities=13% Similarity=0.173 Sum_probs=2.9
Q ss_pred HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
+++..+++......+...+.++.+.++++.++.|++.+.+-++.++..++..++.+|. .|+++ +..+.++++++.+++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprw-ig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRW-IGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcce-eeecHHHHHHHHHHH
Confidence 4444555533333344456666688999999999999999999999999999999983 44444 345555656555443
Q ss_pred hhhh--------------------------------------------------hHHHHHHHHHHHhhhhhhHHHHHHHH
Q psy15069 350 AFCY--------------------------------------------------NYVELAIYAGVFGAMIGAYVGLTSVI 379 (461)
Q Consensus 350 ~~~~--------------------------------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~ 379 (461)
.+-+ -++.+++..++.|+|....+++..++
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 2100 01234556688999999999999999
Q ss_pred HHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc---------------------cCCchHHHHHHhHHHHHHHHH
Q psy15069 380 LVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS---------------------TLSYSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 380 ~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~---------------------~g~~~~~f~~~~~~~l~~~~~ 438 (461)
+-|.+++++.+...|+......+|-++|-.++|...+. .|.|...|++.+++.++.++.
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888866521 345888899999988888888
Q ss_pred HHHHHHhhHhH
Q psy15069 439 LFVIPSLQSYL 449 (461)
Q Consensus 439 ~~~~~~~~~~~ 449 (461)
++..|+.-++.
T Consensus 246 l~~FPk~lp~~ 256 (539)
T PF03137_consen 246 LFFFPKKLPGT 256 (539)
T ss_dssp -----------
T ss_pred HHcCCccCCCc
Confidence 77777654443
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.06 E-value=0.0003 Score=69.78 Aligned_cols=144 Identities=13% Similarity=0.089 Sum_probs=84.3
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHH--HhCCCch-hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH--
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAE--QRGVTRS-NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA-- 340 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~s~~-~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~-- 340 (461)
+.|...+..++.++....+++-.....+ +.+.+.. ..-..+.+++++..+||.+..+..= .+.+.+++...++.
T Consensus 270 ki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~ 348 (437)
T TIGR00939 270 KVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRV 348 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHH
Confidence 3555555555544443333322211111 1223333 4456777899999999997654321 11221222222211
Q ss_pred HHHHHHHHhh---------hhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccce
Q psy15069 341 ICGAATVICA---------FCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPI 410 (461)
Q Consensus 341 ~~~~~~~~~~---------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i 410 (461)
+..-.++++. +.++-+..++..+++|+..|-..++...+..+..++++|..+..++..+-.+|-.+|..+
T Consensus 349 iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 349 LFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111211 123556677789999999998888888888888988888888888888888887777654
No 265
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.01 E-value=0.00029 Score=65.78 Aligned_cols=153 Identities=20% Similarity=0.191 Sum_probs=107.1
Q ss_pred hhccccchhhHhhHHHHhCCCc--hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhh-
Q psy15069 278 SIGFNVPYVYIVKLAEQRGVTR--SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYN- 354 (461)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 354 (461)
...........+.+..+.+.+. ...++..+...+...++.++.|++.||.|+|+........ ..+..+...+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 92 (338)
T COG0477 15 GLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL--FLLGTLLLALAPNV 92 (338)
T ss_pred HHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH--HHHHHHHHHhCccc
Confidence 3444455556677777766665 4788899999999999999999999998666443332221 2222333333333
Q ss_pred -HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCc-cchhHHHHHHHH-HHHhhhhhccceeeeeecc-cCCchHHHHHHhH
Q psy15069 355 -YVELAIYAGVFGAMIGAYVGLTSVILVDLLGL-DRLTNAFGLLLL-FQGIASLVGPPIAGFLYDS-TLSYSPAFFLAGG 430 (461)
Q Consensus 355 -~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~-~~~~g~~~gp~i~g~l~~~-~g~~~~~f~~~~~ 430 (461)
.+.+++..+..|++.+...+....++.+..|+ ++++...+.... ...++..++|.+++.+.+. ...|+..|.....
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 66777777778999999999999999999987 578888888888 5778888888777777654 2247775554444
Q ss_pred HH
Q psy15069 431 AI 432 (461)
Q Consensus 431 ~~ 432 (461)
..
T Consensus 173 ~~ 174 (338)
T COG0477 173 LG 174 (338)
T ss_pred HH
Confidence 43
No 266
>KOG2563|consensus
Probab=97.85 E-value=0.00016 Score=69.69 Aligned_cols=121 Identities=17% Similarity=0.043 Sum_probs=85.5
Q ss_pred hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh-----hh-hHH--HHHHHHHHHh
Q psy15069 295 RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF-----CY-NYV--ELAIYAGVFG 366 (461)
Q Consensus 295 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~--~~~~~~~l~g 366 (461)
+| +...+-++..++.+.++.-.+.+-|+.||+|.|.... ++....+++..+=.. .+ ..+ .......+.+
T Consensus 75 Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l--lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa 151 (480)
T KOG2563|consen 75 YG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL--LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAA 151 (480)
T ss_pred hc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH--HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHH
Confidence 45 6667778888899999999999999999977665544 444444444333221 22 233 3445556666
Q ss_pred hhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069 367 AMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418 (461)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~ 418 (461)
..+-....+..-+..-++|+++|+.+..+..+...+|.++|-.+...+..+.
T Consensus 152 ~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 152 AAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 6666666666677888999999999999999888888888877777776543
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.83 E-value=0.00045 Score=68.73 Aligned_cols=147 Identities=10% Similarity=-0.022 Sum_probs=91.4
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCC-----CchhhHHHHHHHhhhhhhh-hhhhhhccCCCCcchhHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGV-----TRSNASSLISIVGAANMVS-RVILGYISDRPCVNRLYIYNGC 338 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~~~~~~~~~~~~~~g-~~~~g~l~dr~~~~~~~~~~~~ 338 (461)
|+++...+..|+..+.++..-..- |...+ ......++.+..-+...+. .++.+++++|+++++.......
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~lK----D~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRDTK----DTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh----hheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 356667777777776664433322 33333 3356777777666665555 8889999999766655433332
Q ss_pred HHHHHHHHHHhh---hhhh--------------------------HHHHHHHHHHHhhhhhhHHH-HHHHHHHHhcCccc
Q psy15069 339 LAICGAATVICA---FCYN--------------------------YVELAIYAGVFGAMIGAYVG-LTSVILVDLLGLDR 388 (461)
Q Consensus 339 ~~~~~~~~~~~~---~~~~--------------------------~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~ 388 (461)
..+....++.+. ..+. .|...++-+..-+......+ +.+..+.|.+..++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 222222222111 1111 22222222233333334455 78899999999999
Q ss_pred hhHHHHHHHHHHHhhhhhccceeeeee
Q psy15069 389 LTNAFGLLLLFQGIASLVGPPIAGFLY 415 (461)
Q Consensus 389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~ 415 (461)
..+-+++.....++|..+++.+..++.
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888876
No 268
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.82 E-value=5e-05 Score=63.49 Aligned_cols=105 Identities=24% Similarity=0.166 Sum_probs=82.6
Q ss_pred HHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccccchhHHHHHHhhh-
Q psy15069 28 IASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYF- 106 (461)
Q Consensus 28 ~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f- 106 (461)
-.++......+++++++.+++++|+|+.+++|.++..+-.... +-++.+.++.+ .++.|+|.+..|++.-..+.++.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~-s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPA-SALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHH-HHHHhhhhHHhhHhhhHHHHHcCC
Confidence 4455567777888999999999999999999999988655443 45667777775 79999999999999988888887
Q ss_pred hccchhhhhhhccchhhhHHHHhHHHHH
Q psy15069 107 ERLRSLATGIAVCGSGLGTIIFAPIIDY 134 (461)
Q Consensus 107 ~~~rg~a~gi~~~~~~lg~~i~~~l~~~ 134 (461)
+++|++-.++.-.....+.++|..+.-.
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888888777777776666555444
No 269
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.74 E-value=0.00043 Score=66.96 Aligned_cols=163 Identities=7% Similarity=0.034 Sum_probs=119.8
Q ss_pred ccchhhHhhHH-H-HhCCCchhhHHHHHH-HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHH
Q psy15069 282 NVPYVYIVKLA-E-QRGVTRSNASSLISI-VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVEL 358 (461)
Q Consensus 282 ~~~~~~~~~~~-~-~~g~s~~~~~~~~~~-~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (461)
--.-+++..|+ + ++|++..+..--.-. ..-..++.-++...+.|..+.|+..+ +..+...+...++.+.++.+.+
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvii--l~~~~~i~t~~lll~~~sv~~m 97 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVII--LQALSYIITWLLLLFGTSVLAM 97 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHCcHHHH
Confidence 45567888888 3 389998887654433 33445556667788999955554443 4444444555566678899999
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecc-cCCchHHHHHHhHHHHHHHH
Q psy15069 359 AIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDS-TLSYSPAFFLAGGAIFVSGV 437 (461)
Q Consensus 359 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~-~g~~~~~f~~~~~~~l~~~~ 437 (461)
-+.-+++|++.+. ....++++-..+|+++..++.+......-+|..++..++..++.. ..+|....++......++.+
T Consensus 98 q~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 98 QLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999988775 455567777788999999999999999999999999998877763 24688887787777777777
Q ss_pred HHHHHHHhhH
Q psy15069 438 MLFVIPSLQS 447 (461)
Q Consensus 438 ~~~~~~~~~~ 447 (461)
..+++|+.++
T Consensus 177 ~~~fLP~~~~ 186 (412)
T PF01770_consen 177 IALFLPMPKR 186 (412)
T ss_pred HHHHcCCCCc
Confidence 7777776554
No 270
>KOG2816|consensus
Probab=97.70 E-value=0.00022 Score=70.92 Aligned_cols=125 Identities=18% Similarity=0.277 Sum_probs=90.5
Q ss_pred hhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhh--hhhhHHHHHHHHHHHhcCcc
Q psy15069 310 GAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGA--MIGAYVGLTSVILVDLLGLD 387 (461)
Q Consensus 310 ~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--~~~~~~~~~~~~~~~~~~~~ 387 (461)
++..++.++..|.++||+|+|..+.+.....+... +...+. . |+.++ +.++ +.+.......++++|....+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~--~~~~~~-~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPA--LCLLFQ-G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhH--HHHHHH-H-HHHhh---hcccccchhhhhhhhhhheeeccchh
Confidence 67888999999999999776665544333222222 222222 2 33333 3333 34566777788899999999
Q ss_pred chhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHH
Q psy15069 388 RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 388 ~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
+|...+|+.+.....+..++|.+++.+.... ++...|.+..+..++..+.....
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~ 198 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLF 198 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999985 58888888888777776655443
No 271
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.68 E-value=0.00016 Score=53.23 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=64.1
Q ss_pred hccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHH
Q psy15069 279 IGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVEL 358 (461)
Q Consensus 279 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (461)
.+...+...+|.+.++.++|.++.+++-+...+++++|.+...++.++ .++..++..+++...+..+.+.+.++.+..
T Consensus 6 igRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~--~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH--SRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 445567788999999999999999999999999999999999999998 455555567777777888888877766543
No 272
>KOG1237|consensus
Probab=97.67 E-value=0.0019 Score=66.01 Aligned_cols=153 Identities=14% Similarity=0.073 Sum_probs=111.2
Q ss_pred eehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhc-CcceeeehhhHHHHHHHHHhhcccc------------
Q psy15069 9 ILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKY-GCRNVTICGAILGSACLAVSVFAKN------------ 75 (461)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~g~~~~~~~~~l~~~~~~------------ 75 (461)
.+..++.++++.+.....-..+.+........++.+.++|-| ||-+.+.++.++..++.++..++..
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 456677888898888888888888888888889999999965 5666777777777777654333211
Q ss_pred ----------h---hhHHHHhhccccccccccchhHHHHHHhhhh----c---cchhhhhhhccchhhhHHHHhHHHHHH
Q psy15069 76 ----------V---ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE----R---LRSLATGIAVCGSGLGTIIFAPIIDYT 135 (461)
Q Consensus 76 ----------~---~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~----~---~rg~a~gi~~~~~~lg~~i~~~l~~~l 135 (461)
- ..++.. .-+..+|.|...+.....-.+-|+ + ++..-+.+++...++|..+...+..+.
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~-l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGA-LYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCcccCcchHHHHHHHHH-HHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 1 133333 245678888888888777777764 1 223557778888999998888888877
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069 136 VREYGWKITLLVLSVTVLSAVLFGILL 162 (461)
Q Consensus 136 ~~~~gw~~~f~i~~~~~l~~~i~~~~~ 162 (461)
-++.||.+.|-+..+..++.++..+..
T Consensus 218 q~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 218 QDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred hhcccceeeccHHHHHHHHHHHHHHcC
Confidence 778999999999888877766554443
No 273
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.51 E-value=4.7e-05 Score=55.42 Aligned_cols=57 Identities=14% Similarity=0.224 Sum_probs=49.8
Q ss_pred eeeehHHHHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHH
Q psy15069 7 FGILFIEFTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILG 63 (461)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~ 63 (461)
+-.+.|-+.++.|.|..++|.+.++.-+...++.|+.|.++||+++++.++.+..++
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 345677778889999999999999999999999999999999999998877766554
No 274
>PRK03612 spermidine synthase; Provisional
Probab=97.51 E-value=0.0026 Score=64.66 Aligned_cols=164 Identities=18% Similarity=0.147 Sum_probs=94.2
Q ss_pred HHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHH-HHHHHHHHH-HHHHHh
Q psy15069 273 SNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYI-YNGCLAICG-AATVIC 349 (461)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~-~~~~~~ 349 (461)
..++..++..++-.....++ --+|-+....+.+++++-++..+|+.+.+++.++ ..+.+. ..+.+.+.+ ++..+.
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~--~~~~~~~~e~~i~l~~~~~~~ll 99 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD--AAAGFVAVELLLALLGGLSALIL 99 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444334444333444 4468888888999999999999999999888754 222221 111111111 111111
Q ss_pred hhhhh-----HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee-cccCCchH
Q psy15069 350 AFCYN-----YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY-DSTLSYSP 423 (461)
Q Consensus 350 ~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~-~~~g~~~~ 423 (461)
..... ....+...++.++..|+..|+...+..+... ++.+...|-.+....+|+++|+.+.+++. ...|....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t 178 (521)
T PRK03612 100 YAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRT 178 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHH
Confidence 11111 1122344456778888888887776655332 34677788888888999999999988665 46675555
Q ss_pred HHHHHhHHHHHHHHHH
Q psy15069 424 AFFLAGGAIFVSGVML 439 (461)
Q Consensus 424 ~f~~~~~~~l~~~~~~ 439 (461)
.+++..+..+++++.+
T Consensus 179 ~~~~a~l~~~~a~~~~ 194 (521)
T PRK03612 179 AALTGSLNLLAALVFL 194 (521)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5544443333343333
No 275
>KOG0637|consensus
Probab=97.39 E-value=0.0015 Score=63.24 Aligned_cols=146 Identities=14% Similarity=0.172 Sum_probs=105.6
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC----CCcchhHHHHHHHHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDR----PCVNRLYIYNGCLAI 341 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~~~~~~~~~~~~~~~ 341 (461)
+.+.+....+...++...-..++++|+++.|.+....+.++.+.-+.+++-+++.|..+|| +||||..+.. ....
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~-~s~~ 111 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILA-GSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHH-hhHH
Confidence 4445555566666777777889999999999999999999999999999999999999996 4666665543 3344
Q ss_pred HHHHHHHhhhhhhHH-----------------HHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhH-HHHHHHHHHHhh
Q psy15069 342 CGAATVICAFCYNYV-----------------ELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTN-AFGLLLLFQGIA 403 (461)
Q Consensus 342 ~~~~~~~~~~~~~~~-----------------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~g 403 (461)
..+.+++.++..++. ..++.+-+.-++.-..+...-+++.|+...+++-+ +++....+..+|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 455555665554322 12222334444454556666778899987776667 999999999999
Q ss_pred hhhccceee
Q psy15069 404 SLVGPPIAG 412 (461)
Q Consensus 404 ~~~gp~i~g 412 (461)
+.+|-.+++
T Consensus 192 nvLGY~~g~ 200 (498)
T KOG0637|consen 192 NVLGYALGS 200 (498)
T ss_pred ceeeeeccc
Confidence 988877766
No 276
>KOG3626|consensus
Probab=97.37 E-value=0.00013 Score=75.04 Aligned_cols=177 Identities=14% Similarity=0.171 Sum_probs=129.9
Q ss_pred HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHh
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVIC 349 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 349 (461)
+.+..+.+.+....+...+..+-+.++++..+.|++.+.+-+++.+...+..+...|.. |+++ +..+.++++++.++.
T Consensus 102 l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~H-rPr~-Ig~G~~~m~lgsll~ 179 (735)
T KOG3626|consen 102 LSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGH-RPRW-IGIGLVLMGLGSLLF 179 (735)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccC-ccce-eeechhHHHHHHHHH
Confidence 44445555555544444555555788999999999999999999999999999999953 3333 334555555544443
Q ss_pred hhh-------------------------------------------------hh--HH-HHHHHHHHHhhhhhhHHHHHH
Q psy15069 350 AFC-------------------------------------------------YN--YV-ELAIYAGVFGAMIGAYVGLTS 377 (461)
Q Consensus 350 ~~~-------------------------------------------------~~--~~-~~~~~~~l~g~~~~~~~~~~~ 377 (461)
.+- .+ .| .+++..++.|+|..+.+++..
T Consensus 180 alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGi 259 (735)
T KOG3626|consen 180 ALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGI 259 (735)
T ss_pred hChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCC
Confidence 211 00 22 334455889999999999999
Q ss_pred HHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeee----cc--------------cCCchHHHHHHhHHHHHHHHHH
Q psy15069 378 VILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLY----DS--------------TLSYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 378 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~----~~--------------~g~~~~~f~~~~~~~l~~~~~~ 439 (461)
+++-|.+.+++.....|+...+..+|-++|-.+++.+. |. .|.|...|++.+.+.++.++.+
T Consensus 260 sYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~ 339 (735)
T KOG3626|consen 260 SYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL 339 (735)
T ss_pred ccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998888887777766553 22 3458889999999999999998
Q ss_pred HHHHHhhHh
Q psy15069 440 FVIPSLQSY 448 (461)
Q Consensus 440 ~~~~~~~~~ 448 (461)
++.|+..++
T Consensus 340 f~fPk~lp~ 348 (735)
T KOG3626|consen 340 FFFPKELPK 348 (735)
T ss_pred HhCcccCcc
Confidence 888776554
No 277
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.25 E-value=0.016 Score=52.11 Aligned_cols=55 Identities=18% Similarity=0.340 Sum_probs=37.4
Q ss_pred ccchhhhhhhccchhhhHHHHhHHHHHH---HH--hhchhHHHHHHHHHHHHHHHHHhhc
Q psy15069 108 RLRSLATGIAVCGSGLGTIIFAPIIDYT---VR--EYGWKITLLVLSVTVLSAVLFGILL 162 (461)
Q Consensus 108 ~~rg~a~gi~~~~~~lg~~i~~~l~~~l---~~--~~gw~~~f~i~~~~~l~~~i~~~~~ 162 (461)
|+|+..+.+..-+.++|.++.-..--.. .+ +-+|++.+.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6788888888999999987753332111 11 2369999998888877666555554
No 278
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.13 E-value=0.019 Score=57.67 Aligned_cols=115 Identities=11% Similarity=-0.026 Sum_probs=70.9
Q ss_pred CccHHHHHHHHHHh-hhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---------cch---------------
Q psy15069 22 DGVTSWIASILVGV-TLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---------KNV--------------- 76 (461)
Q Consensus 22 ~~~~~~~~s~~~~~-~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---------~~~--------------- 76 (461)
...+..+-....+. ..+...+..++.+|+++.++.-.....+...+.+.++. ++.
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~ 136 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKG 136 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHH
Confidence 34455555544443 34557789999999999999777766666666555543 111
Q ss_pred -------hhHHHHhhccccccccccch-hHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHHHHHHH
Q psy15069 77 -------ITLCITIGFGTGLGFGLIYL-PAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPIIDYTVR 137 (461)
Q Consensus 77 -------~~l~i~~~~l~G~g~~~~~~-~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~ 137 (461)
|...+.+ ++.-+=...+.. .-...+++.+ .++-.+..++...+.++|.++++.+...+.+
T Consensus 137 ~i~~~~~Wt~slfY-v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 137 FIAMFRNWTFSLFY-VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111101 111111111111 1234567767 4788889999999999999999999998887
No 279
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.09 E-value=0.0073 Score=50.58 Aligned_cols=111 Identities=9% Similarity=-0.033 Sum_probs=78.9
Q ss_pred CchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHH
Q psy15069 298 TRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTS 377 (461)
Q Consensus 298 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 377 (461)
+....-.-.++......+..++.+.+.+++|. |+.+.++.+...+-.. ..+.++.+.++...++.|++.+..+....
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~--K~sm~lg~~~y~~y~~-~~~~~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNKLGP--KWSMILGSLGYAIYIA-SFFYPNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHhh--HHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 33334445556666677777888888888554 4444445444443222 22455778888899999999999999999
Q ss_pred HHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069 378 VILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA 411 (461)
Q Consensus 378 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~ 411 (461)
.++.+...++.+++..++.-.....+.++|..+.
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999989999988887777777777766543
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.78 E-value=0.0017 Score=63.41 Aligned_cols=109 Identities=15% Similarity=0.180 Sum_probs=84.0
Q ss_pred eeehhhHHHHHHHHHhhcc---cch------hhHHHHhhccccccccccchhHHHHHHhhhh----ccchhhhhhhccch
Q psy15069 55 VTICGAILGSACLAVSVFA---KNV------ITLCITIGFGTGLGFGLIYLPAIVSVTCYFE----RLRSLATGIAVCGS 121 (461)
Q Consensus 55 ~~~~g~~~~~~~~~l~~~~---~~~------~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~----~~rg~a~gi~~~~~ 121 (461)
.++.|.++..+|.++..++ .+. +.+++++ ++.++|.|..-+.......+-++ ++|.....+++.+.
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL-~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGL-ALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHH-HHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHH-HHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 3566777888888773332 222 5677764 67899999999999999988873 24677788899999
Q ss_pred hhhHHHHhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHhhccc
Q psy15069 122 GLGTIIFAPIIDYTVREYGWKITLLVLSVTVLSAVLFGILLRP 164 (461)
Q Consensus 122 ~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~~l~~~i~~~~~~~ 164 (461)
++|..+++.+..++-+++||...|.+.++..++..+..+.-++
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999999999988877766555444
No 281
>KOG1479|consensus
Probab=96.71 E-value=0.038 Score=53.36 Aligned_cols=106 Identities=11% Similarity=0.078 Sum_probs=65.6
Q ss_pred hhHHHHHH-HhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHH-h------hhhhhHHHHHHHHHHHhhhhhhH
Q psy15069 301 NASSLISI-VGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVI-C------AFCYNYVELAIYAGVFGAMIGAY 372 (461)
Q Consensus 301 ~~~~~~~~-~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~l~g~~~~~~ 372 (461)
-.-++... +++...+|++...++-++ .+|.....+..=...+-++. + ....+-++.++...++|+..|=.
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 34445555 889999999988888886 34433322222111111111 1 12346678888999999999877
Q ss_pred HHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcc
Q psy15069 373 VGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGP 408 (461)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp 408 (461)
..+...+..+.+|++++-.+-.++..+-..|...|.
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence 777777888888877655555555555555554444
No 282
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.68 E-value=0.0044 Score=60.52 Aligned_cols=86 Identities=14% Similarity=0.101 Sum_probs=73.9
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCcc---chhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHH
Q psy15069 356 VELAIYAGVFGAMIGAYVGLTSVILVDLLGLD---RLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAI 432 (461)
Q Consensus 356 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~ 432 (461)
+.+++...+.++|.|..-|...++.+|.++++ ++.+.+.+.+...++|..+++.+.+++.++.| |...|.+.++..
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~ 112 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGM 112 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc-hhhhhhHHHHHH
Confidence 56788888999999999999999999999865 46777888999999999999999999998875 999999999888
Q ss_pred HHHHHHHHHH
Q psy15069 433 FVSGVMLFVI 442 (461)
Q Consensus 433 l~~~~~~~~~ 442 (461)
+++.+..+.-
T Consensus 113 ~~~~~~f~~~ 122 (372)
T PF00854_consen 113 LLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHhC
Confidence 8887765543
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.58 E-value=0.00068 Score=64.32 Aligned_cols=107 Identities=11% Similarity=0.157 Sum_probs=3.5
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH--HHHHHHHHh----------hhhhhHHHHHHHHHHHhhhhhh
Q psy15069 304 SLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA--ICGAATVIC----------AFCYNYVELAIYAGVFGAMIGA 371 (461)
Q Consensus 304 ~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~l~g~~~~~ 371 (461)
..+..++++..+||.+.++..=+ +.+++++....+. +..-.++++ ...++-++.++.++++|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWP-GPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEec-ccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 45668999999999988764321 1233333322111 111111111 1122445667788899999998
Q ss_pred HHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcccee
Q psy15069 372 YVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIA 411 (461)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~ 411 (461)
..++...+..+..+++++..+-.+..++-.+|-.+|..++
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999888888888887777777777776653
No 284
>KOG3574|consensus
Probab=96.47 E-value=0.038 Score=52.41 Aligned_cols=147 Identities=12% Similarity=0.050 Sum_probs=89.6
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC-----CCCcchhHHHHHHH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD-----RPCVNRLYIYNGCL 339 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d-----r~~~~~~~~~~~~~ 339 (461)
+++.++...+..+........ .+|.+++..|.|-++.+.....++= ..-.+++.++.| |+||||.++.-.-.
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 356667777777777766655 8899898888887766653222221 234678888999 89999888764444
Q ss_pred HHHHHHHHHhhhhh----------hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccc
Q psy15069 340 AICGAATVICAFCY----------NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPP 409 (461)
Q Consensus 340 ~~~~~~~~~~~~~~----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~ 409 (461)
++...+.++....+ +.......+++.-+..+......-.....+..+++.|-+..........|.++|..
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 33333333322221 22223334455666666555555556666777787777766666666777777665
Q ss_pred eeeee
Q psy15069 410 IAGFL 414 (461)
Q Consensus 410 i~g~l 414 (461)
+.=.+
T Consensus 188 ifLaL 192 (510)
T KOG3574|consen 188 VFLAL 192 (510)
T ss_pred eeeEe
Confidence 54433
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.20 E-value=0.32 Score=48.10 Aligned_cols=178 Identities=12% Similarity=0.022 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHhhccccchhhHhhHHHHh-CCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhH----HHH-HHH
Q psy15069 266 IFILFTISNIFTSIGFNVPYVYIVKLAEQR-GVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLY----IYN-GCL 339 (461)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~----~~~-~~~ 339 (461)
..+.+++..++...+.-...+..|.++.+. .-+-.-.+..-....+..++..+..|.+.||..|.+.. +.. .+.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 345678888888888888888888888555 33444445555556677888888999999995433321 111 222
Q ss_pred HHHHHHHHHhhhhhh-----HHHHHHHH-HHHhhh-hhhHHHHHHHH------HHHhc--CccchhHHHHHHHHHHHhhh
Q psy15069 340 AICGAATVICAFCYN-----YVELAIYA-GVFGAM-IGAYVGLTSVI------LVDLL--GLDRLTNAFGLLLLFQGIAS 404 (461)
Q Consensus 340 ~~~~~~~~~~~~~~~-----~~~~~~~~-~l~g~~-~~~~~~~~~~~------~~~~~--~~~~~~~~~g~~~~~~~~g~ 404 (461)
.+.+..++.....+. .+...... .+..++ ..-.......+ +..+. +++...+..+.+.-+=.+.-
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 222222222211111 12221111 111111 11111121111 12223 23344445555555555678
Q ss_pred hhccceeeeeecccCCchHHHHHHhHHHHHHHHH-HHHHHH
Q psy15069 405 LVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM-LFVIPS 444 (461)
Q Consensus 405 ~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~-~~~~~~ 444 (461)
.++|.+.|.+.+.. ++.....+.++..+++.+. .+++.+
T Consensus 163 llaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~vEy~~l~~ 202 (432)
T PF06963_consen 163 LLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVFVEYFLLAR 202 (432)
T ss_pred HHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999875 5888888888888887766 334433
No 286
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.05 E-value=0.035 Score=53.96 Aligned_cols=130 Identities=13% Similarity=0.016 Sum_probs=85.0
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Q psy15069 303 SSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVD 382 (461)
Q Consensus 303 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 382 (461)
+.+...-.+..++.++++.++.+|...+.+... +..+..+++++..+.++.+.-++..++.+++.|..-...-.+ +.
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~--~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~ 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILI--CVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-TH 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHH--HHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HH
Confidence 335555667788888889999999766666553 444556667777778888888888888888888766666665 44
Q ss_pred hcCccchhHHHHHHHHHHHhhhhhccceeeeeecccC-CchHHHHHHhHHHHHHHHHHH
Q psy15069 383 LLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTL-SYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 383 ~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g-~~~~~f~~~~~~~l~~~~~~~ 440 (461)
.+++ ...+......+.++.+|+...-.+-+ .| +.+..++....+.++-.+..+
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f 192 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYF 192 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHH
Confidence 5653 23455555666677777665544444 33 456667666665544444433
No 287
>PRK03612 spermidine synthase; Provisional
Probab=95.95 E-value=0.028 Score=57.28 Aligned_cols=137 Identities=11% Similarity=0.048 Sum_probs=78.3
Q ss_pred HhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHH---HHHHHHHh----hcccchhhHHHHhhccccc
Q psy15069 17 VFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAIL---GSACLAVS----VFAKNVITLCITIGFGTGL 89 (461)
Q Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~---~~~~~~l~----~~~~~~~~l~i~~~~l~G~ 89 (461)
-+|-+..+.+.+.+++.++.++++.+++++.++.-++.. ..-..+ ..++..+. .+...+..+...+.++.++
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 122 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGL 122 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357778888999999999999999999888644333322 111111 11111111 1111111111122345566
Q ss_pred cccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHHHH-hhchhHHHHHHHHHHHH
Q psy15069 90 GFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYTVR-EYGWKITLLVLSVTVLS 154 (461)
Q Consensus 90 g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~-~~gw~~~f~i~~~~~l~ 154 (461)
-.|+..|....+..+...++-+...|-.+....+|.++|..+.+++.- .+|-..+.++.+.+.+.
T Consensus 123 l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~ 188 (521)
T PRK03612 123 LIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLL 188 (521)
T ss_pred HHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 666666555544443323345667777888888888888888777554 56766565555554433
No 288
>KOG4830|consensus
Probab=95.74 E-value=0.008 Score=53.64 Aligned_cols=144 Identities=9% Similarity=0.074 Sum_probs=84.1
Q ss_pred ccccchhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHH
Q psy15069 260 ELLRDPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGC 338 (461)
Q Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~ 338 (461)
..+++-.++-+.+.+++.-.-...-..|+|.|. ++..++.+..+++-.+..+..+.-+.+..-+-=. |.|.+..+..+
T Consensus 196 ~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwn-gkrlKayYsaG 274 (412)
T KOG4830|consen 196 SWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWN-GKRLKAYYSAG 274 (412)
T ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcC-cceeeeeeecc
Confidence 467777888888888888777777788888887 8888888888888888888777766654332221 23333333333
Q ss_pred HHHHHHHHHHhhhh-hhHHH-HHHHHHHHhhhhhhHHHHHHHHHHHhcCcc--chhHHHHHHHHHHHhhh
Q psy15069 339 LAICGAATVICAFC-YNYVE-LAIYAGVFGAMIGAYVGLTSVILVDLLGLD--RLTNAFGLLLLFQGIAS 404 (461)
Q Consensus 339 ~~~~~~~~~~~~~~-~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~ 404 (461)
.++...+.....+. +++-. .+...++.|+..+.......++..++...+ ..+..+|-++++--+..
T Consensus 275 giiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~ 344 (412)
T KOG4830|consen 275 GIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSN 344 (412)
T ss_pred cHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcc
Confidence 33222222222222 22222 233445677777766555555555655533 34445566555544433
No 289
>KOG1237|consensus
Probab=95.26 E-value=0.1 Score=53.63 Aligned_cols=173 Identities=9% Similarity=0.068 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAA 345 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 345 (461)
...+.....+...+++++..-+..|+ .+++.+...+.-....+........+++++++|-+ ..|.+.+.++.++..++
T Consensus 39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f-~gry~tI~~~s~i~~~G 117 (571)
T KOG1237|consen 39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSF-LGRYFTINIGSLISLLG 117 (571)
T ss_pred HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33344445556666777766677777 78888888888888888888888999999999975 34544444444444444
Q ss_pred HHHhhhhh----------------------h---HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcC---c-c--chhHHHH
Q psy15069 346 TVICAFCY----------------------N---YVELAIYAGVFGAMIGAYVGLTSVILVDLLG---L-D--RLTNAFG 394 (461)
Q Consensus 346 ~~~~~~~~----------------------~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~-~--~~~~~~g 394 (461)
++++.... + ...++...-+..+|.|..-+...+.-+|.++ + + +...-+.
T Consensus 118 ~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFn 197 (571)
T KOG1237|consen 118 LFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFN 197 (571)
T ss_pred HHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchh
Confidence 33222211 1 1133444556667888888888888888888 2 2 2335678
Q ss_pred HHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHH
Q psy15069 395 LLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFV 441 (461)
Q Consensus 395 ~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~ 441 (461)
+.....++|..++-.+.-++-|.. +|...|.+..++..++.++++.
T Consensus 198 W~yf~~~~g~l~a~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 198 WFYFSQNGGALLAQTVLVYIQDNV-GWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcc-cceeeccHHHHHHHHHHHHHHc
Confidence 888888899888888877777765 5999999888888777766554
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.07 E-value=0.75 Score=46.38 Aligned_cols=151 Identities=9% Similarity=0.024 Sum_probs=83.0
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcchhHHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNRLYIYNGCLAI 341 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~ 341 (461)
.++++.+.+..++..+.+...-..--... ... .+.....+=....+ ..++...+..+++||+++.+.....+...+
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~--gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILRDLKDTLVVTAQ--GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 46788888888877766533322221111 112 34444444332222 344556678899999766654432222211
Q ss_pred H---HHHHHHhhhhh----hH----------------------HHHHHHHHHHhhhhhhHHH-HHHHHHHHhcCccchhH
Q psy15069 342 C---GAATVICAFCY----NY----------------------VELAIYAGVFGAMIGAYVG-LTSVILVDLLGLDRLTN 391 (461)
Q Consensus 342 ~---~~~~~~~~~~~----~~----------------------~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 391 (461)
. ..++++.+..+ +. |...+.-+..-+......+ +.+.+..|.++.++..+
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKR 180 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKR 180 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 1 11222222111 11 1111111111111222233 57888999999999999
Q ss_pred HHHHHHHHHHhhhhhccceeeeeec
Q psy15069 392 AFGLLLLFQGIASLVGPPIAGFLYD 416 (461)
Q Consensus 392 ~~g~~~~~~~~g~~~gp~i~g~l~~ 416 (461)
-+++.....++|.++++.+..++.+
T Consensus 181 fYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 181 FYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888777766
No 291
>KOG2601|consensus
Probab=94.83 E-value=0.14 Score=48.48 Aligned_cols=140 Identities=12% Similarity=0.100 Sum_probs=72.2
Q ss_pred HHhHhcCCCccHHHHHHHH-HHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHH------hhcc-c-----chhhHH
Q psy15069 14 FTKVFQEGDGVTSWIASIL-VGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAV------SVFA-K-----NVITLC 80 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l------~~~~-~-----~~~~l~ 80 (461)
++..++-+....--+..+. .....+.+++.|-+.|+..|+|++..-..+-=++.++ ..+. + +..++.
T Consensus 53 ~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t 132 (503)
T KOG2601|consen 53 FMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFT 132 (503)
T ss_pred HHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHH
Confidence 4455555444433333333 4455677889999999999999977665543333322 2222 2 344444
Q ss_pred HHhhcccc----ccccccchhHHHHHHhhh----h-ccchhhh---hhhccchhhhHHHHhHHHHHHHHhhchhHHHHHH
Q psy15069 81 ITIGFGTG----LGFGLIYLPAIVSVTCYF----E-RLRSLAT---GIAVCGSGLGTIIFAPIIDYTVREYGWKITLLVL 148 (461)
Q Consensus 81 i~~~~l~G----~g~~~~~~~~~~~~~~~f----~-~~rg~a~---gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~ 148 (461)
.++ ++.- ++.-........+-.+|. . +.+..+. +.....-..--.+.|.+.+.+++..+-|..-.+.
T Consensus 133 ~~l-vLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f 211 (503)
T KOG2601|consen 133 VCL-VLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTF 211 (503)
T ss_pred HHH-HHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhh
Confidence 332 2211 111111111222334554 1 2233333 4444455556677778888777766777765555
Q ss_pred HHHHHH
Q psy15069 149 SVTVLS 154 (461)
Q Consensus 149 ~~~~l~ 154 (461)
++-.++
T Consensus 212 ~~w~~v 217 (503)
T KOG2601|consen 212 AAWALV 217 (503)
T ss_pred HHHHHH
Confidence 554444
No 292
>KOG1479|consensus
Probab=93.42 E-value=1.8 Score=42.08 Aligned_cols=176 Identities=14% Similarity=0.062 Sum_probs=77.9
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHHHHhCCCch---hhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRGVTRS---NASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLA 340 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~---~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~ 340 (461)
+-.++..++...-.......+.+..+.|.+++-.+.. -.........+..++......++.-| .+++......+.
T Consensus 17 ~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~--~~~~~~~~l~~~ 94 (406)
T KOG1479|consen 17 NLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR--LRTRVGYLLSLI 94 (406)
T ss_pred ccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 3344555555554555566666766666654422222 12222233444555556666666666 233222211111
Q ss_pred H-HHHHHHHhhh--hh-----hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceee
Q psy15069 341 I-CGAATVICAF--CY-----NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAG 412 (461)
Q Consensus 341 ~-~~~~~~~~~~--~~-----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g 412 (461)
. ..+..+.+.. .. .++...+..++.+++.+........... .+|++.....++-.+.++.+.+.+ .++..
T Consensus 95 ~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~ytqavm~G~a~aG~l~Sl~-~i~tk 172 (406)
T KOG1479|consen 95 AILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEYTQAVMSGQALAGTLTSLL-RILTK 172 (406)
T ss_pred HHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHHHHHHHhcchhHhHHHHHH-HHHHH
Confidence 1 1111111122 11 2334455566777777777777766444 457665444433333332222211 12222
Q ss_pred eee-cccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 413 FLY-DSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 413 ~l~-~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
... |.-.+-..-|.+..++.+++.++...++
T Consensus 173 a~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~ 204 (406)
T KOG1479|consen 173 AAFSDSRTSALIYFITSTVILLLCFVLYLVLP 204 (406)
T ss_pred HhcCCCCceeehhHHHHHHHHHHHHHHHHHhh
Confidence 222 2112233445555555556666555433
No 293
>KOG4332|consensus
Probab=91.98 E-value=0.13 Score=46.65 Aligned_cols=103 Identities=14% Similarity=0.092 Sum_probs=67.5
Q ss_pred hccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHH
Q psy15069 279 IGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVEL 358 (461)
Q Consensus 279 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (461)
.+-+.-.+|+-...+.+|+...+++.++.......++...+.|-++||-||+|.-+. -++...+++ +.-+.+++-.+
T Consensus 51 AgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvt--ycitYiLsC-iTKhSpqYkVL 127 (454)
T KOG4332|consen 51 AGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT--YCITYILSC-ITKHSPQYKVL 127 (454)
T ss_pred hhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceee--ehHHHHHHH-HhhcCCceEEE
Confidence 343333444433447889999999987776666667777788999999888776442 112222222 22356677788
Q ss_pred HHHHHHHhhhhhhHHHHHHH-HHHHhc
Q psy15069 359 AIYAGVFGAMIGAYVGLTSV-ILVDLL 384 (461)
Q Consensus 359 ~~~~~l~g~~~~~~~~~~~~-~~~~~~ 384 (461)
.+.+++-|+..+..++..-+ ++.|..
T Consensus 128 mVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 128 MVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred eehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 88999999988877777665 455554
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.98 E-value=5 Score=39.93 Aligned_cols=150 Identities=9% Similarity=0.015 Sum_probs=84.0
Q ss_pred chhHHHHHHHHHHHhhccccchhhHhhHHHHhC---CCchhhHHHHHHHhh-hhhhhhhhhhhccCCCCcchhHHHHHHH
Q psy15069 264 DPIFILFTISNIFTSIGFNVPYVYIVKLAEQRG---VTRSNASSLISIVGA-ANMVSRVILGYISDRPCVNRLYIYNGCL 339 (461)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~~~~~~~~~~~~~ 339 (461)
.+++..+.+..++..+.++..-..- |.+. ..+....++=+..-+ +.++..++..++.++..+++......+.
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR~lK----Dslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~ 101 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLRSLK----DSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGF 101 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh----hheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 3456666776666665543322211 3332 345555565555555 5667778889999986555544332222
Q ss_pred HHHHHHH---HHhhh----------hh-----hH------------HHHHHHHHHHhhhhhhHHH-HHHHHHHHhcCccc
Q psy15069 340 AICGAAT---VICAF----------CY-----NY------------VELAIYAGVFGAMIGAYVG-LTSVILVDLLGLDR 388 (461)
Q Consensus 340 ~~~~~~~---~~~~~----------~~-----~~------------~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~ 388 (461)
......+ .+.+. .+ .. |...+.-.+.=+-.....+ +.+....|+...++
T Consensus 102 F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~e 181 (509)
T COG3202 102 FLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEE 181 (509)
T ss_pred HHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 2221111 11111 01 01 2211111111111222223 56778899999999
Q ss_pred hhHHHHHHHHHHHhhhhhccceeeeeecc
Q psy15069 389 LTNAFGLLLLFQGIASLVGPPIAGFLYDS 417 (461)
Q Consensus 389 ~~~~~g~~~~~~~~g~~~gp~i~g~l~~~ 417 (461)
..+-+++.+...+++..++..+.+++..+
T Consensus 182 akRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 182 AKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999998888887763
No 295
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=90.18 E-value=0.62 Score=46.26 Aligned_cols=142 Identities=11% Similarity=0.040 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHhhccccchhhHhhHHHH--hCCCchhhHHHHHHHhhhhhhhhhhhhhccC-----CCCcchhHHHHHHH
Q psy15069 267 FILFTISNIFTSIGFNVPYVYIVKLAEQ--RGVTRSNASSLISIVGAANMVSRVILGYISD-----RPCVNRLYIYNGCL 339 (461)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d-----r~~~~~~~~~~~~~ 339 (461)
+.++.+.++++.........-+|.++++ .+.|-++.+......+=- --.+++.++.| |+||||.+++-+-.
T Consensus 2 ~~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~Pf--SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~ 79 (544)
T PF13000_consen 2 IALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPF--SLKLLWAPIVDSVYSKRIGRRKSWIIPIQY 79 (544)
T ss_pred eeHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechh--HHHHhhhhhhhhhcccccCCcchhhhHHHH
Confidence 3456777888888776666678888877 677777766532211111 13455666666 77888887653333
Q ss_pred HHHHHHHHHhhhhh----------h---------H-----HHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHH
Q psy15069 340 AICGAATVICAFCY----------N---------Y-----VELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGL 395 (461)
Q Consensus 340 ~~~~~~~~~~~~~~----------~---------~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 395 (461)
++++.++.+...- + . ..+...+++.-+..+-..-..-.....+..+++++-|..-
T Consensus 80 -l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc 158 (544)
T PF13000_consen 80 -LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC 158 (544)
T ss_pred -HHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence 3344333332211 0 0 0112222222222222222222334445566777766666
Q ss_pred HHHHHHhhhhhcccee
Q psy15069 396 LLLFQGIASLVGPPIA 411 (461)
Q Consensus 396 ~~~~~~~g~~~gp~i~ 411 (461)
....++.|.+++-.+.
T Consensus 159 qtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 159 QTVGQTAGYFLSFTVF 174 (544)
T ss_pred HHhHhhhhHHHHHHHH
Confidence 6666666666655443
No 296
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=89.19 E-value=26 Score=35.12 Aligned_cols=118 Identities=8% Similarity=-0.045 Sum_probs=77.6
Q ss_pred CCCccHHHHHHHHHH-hhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc---------cc----------hh--
Q psy15069 20 EGDGVTSWIASILVG-VTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA---------KN----------VI-- 77 (461)
Q Consensus 20 ~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~---------~~----------~~-- 77 (461)
..+..+.++-+.... ++.+..++.+.+.+++.+.++...-+..++..++++++. ++ ..
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 346678888888888 667889999999999999999888888888888777664 11 00
Q ss_pred --hHH-----HHhhccccccc---cccch-hHHHHHHhhhh-ccchhhhhhhccchhhhHHHHhHHHHHHHH
Q psy15069 78 --TLC-----ITIGFGTGLGF---GLIYL-PAIVSVTCYFE-RLRSLATGIAVCGSGLGTIIFAPIIDYTVR 137 (461)
Q Consensus 78 --~l~-----i~~~~l~G~g~---~~~~~-~~~~~~~~~f~-~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~ 137 (461)
+++ ..++++.=++. ..+.. .-....+|.+. ++-.|-+++...+.+++..+...+..++..
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 011 00011111110 11111 11233455553 667888999999999999999888888875
No 297
>KOG3097|consensus
Probab=88.91 E-value=1.1 Score=42.08 Aligned_cols=87 Identities=15% Similarity=0.079 Sum_probs=53.5
Q ss_pred HHhHhcCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhccccccccc
Q psy15069 14 FTKVFQEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGL 93 (461)
Q Consensus 14 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~ 93 (461)
++...+.+....++. ........++++.+.+++++|.|..+.++......... .-+-+.+..++-. .++.|+|.+.
T Consensus 51 lq~~vn~~lg~~sl~--~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa-~~~~G~aa~p 126 (390)
T KOG3097|consen 51 LQTSVNYDLGTVSLG--ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPA-GLVLGMAAGP 126 (390)
T ss_pred HHHHHhcCcccchhh--hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccH-HHhhcccccc
Confidence 344444444444322 22444456777788999999999988777666554432 2233455666665 6888999888
Q ss_pred cchhHHHHHHh
Q psy15069 94 IYLPAIVSVTC 104 (461)
Q Consensus 94 ~~~~~~~~~~~ 104 (461)
.|..--+++.+
T Consensus 127 ~W~SkgtYlT~ 137 (390)
T KOG3097|consen 127 IWASKGTYLTP 137 (390)
T ss_pred ccccCcceecH
Confidence 77655444433
No 298
>KOG3098|consensus
Probab=88.80 E-value=2.4 Score=42.20 Aligned_cols=104 Identities=12% Similarity=-0.041 Sum_probs=78.4
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhc
Q psy15069 305 LISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLL 384 (461)
Q Consensus 305 ~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 384 (461)
-.++......+..++.+.+.|+ ..+++.+.++..........+. -.|.+-.+...++.|+|.+..+...-.++++..
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~--i~~K~~lv~ga~~y~~f~~gfl-~~N~y~~yfssallG~Gaallw~GqG~ylt~~s 131 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNF--LGPKWALVIGATCYAAFPLGFL-FPNSYYLYFSSALLGFGAALLWTGQGGYLTSNS 131 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHH--hhHHHHHHHHhHHHHHHHHHHH-hcchHHHHHHHHHhhhhHHheecccceehhhcC
Confidence 3677778888888999999999 5566666566555544443333 346677888999999999988888888999999
Q ss_pred CccchhHHHHHHHHHHHhhhhhcccee
Q psy15069 385 GLDRLTNAFGLLLLFQGIASLVGPPIA 411 (461)
Q Consensus 385 ~~~~~~~~~g~~~~~~~~g~~~gp~i~ 411 (461)
.++...+..++.=.+...+.++|..+.
T Consensus 132 t~~tie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 132 TRETIERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred ChhhHHHHHHHHHHHHHHHHHhhhHhh
Confidence 988888888887777777777765443
No 299
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=88.46 E-value=26 Score=34.21 Aligned_cols=21 Identities=24% Similarity=0.494 Sum_probs=14.6
Q ss_pred cccccchhHHHHHHHHHHHhh
Q psy15069 259 MELLRDPIFILFTISNIFTSI 279 (461)
Q Consensus 259 ~~~l~~~~~~~~~~~~~~~~~ 279 (461)
++.+++|..+...++..+...
T Consensus 239 ~~~~~nP~~~a~~lgli~~~~ 259 (385)
T PF03547_consen 239 LKLFKNPPLIAIILGLIIGLI 259 (385)
T ss_pred HHHHhCcHHHHHHHHHHHHHH
Confidence 456889988877776665444
No 300
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=79.07 E-value=21 Score=35.63 Aligned_cols=33 Identities=6% Similarity=-0.032 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccc
Q psy15069 355 YVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDR 388 (461)
Q Consensus 355 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 388 (461)
++..++..++.|++.+........+.. .+|++.
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~ 138 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH
Confidence 444455566777777777766666544 567443
No 301
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=78.33 E-value=66 Score=30.90 Aligned_cols=147 Identities=18% Similarity=0.135 Sum_probs=77.3
Q ss_pred hCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHH---HHHHH--HHH-HHHHHhh--hhhhHHHHHHHHHHHh
Q psy15069 295 RGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIY---NGCLA--ICG-AATVICA--FCYNYVELAIYAGVFG 366 (461)
Q Consensus 295 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~---~~~~~--~~~-~~~~~~~--~~~~~~~~~~~~~l~g 366 (461)
.|-..-+.+.+.+.+-.+.-+|+.+.-++.|.--. .+++. .++++ +++ +..+.+. ..++.+.++...++.|
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~-~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG 116 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAAL-ARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIG 116 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHH-HHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 46566777888887777777888877777775211 11111 01111 111 1111222 2336778888889999
Q ss_pred hhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeee-ecccCCchHHHHHHhHHHHHHHHHHHHHHH
Q psy15069 367 AMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFL-YDSTLSYSPAFFLAGGAIFVSGVMLFVIPS 444 (461)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l-~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~ 444 (461)
.-.|+-.|+.+.+..... ++.....+.....-++|...+..+-.++ .-+.|-.+..+....+-...+.+.++.+++
T Consensus 117 ~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~fllr~ 193 (508)
T COG4262 117 VLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTLFLLRH 193 (508)
T ss_pred HHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988777622 1122222223333455555554443332 234454555554433333333333444433
No 302
>KOG2601|consensus
Probab=77.13 E-value=55 Score=31.79 Aligned_cols=169 Identities=13% Similarity=0.068 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHHhhccccchhhHhhHHHHhC-CCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHH-----HH
Q psy15069 265 PIFILFTISNIFTSIGFNVPYVYIVKLAEQRG-VTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYN-----GC 338 (461)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~-----~~ 338 (461)
+..+.+.+++++...+--...+....|+.+++ -|....+..-.+-+...++-.++.|...|+..+.|..... ++
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlS 106 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLS 106 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHH
Confidence 34455677777777776667777777886654 3444455555555666777777888889986655543221 23
Q ss_pred HHHHHHHHHHhhhhh-----hHHHHHHHHHHHhhhhhhHHHHH---HHHH--HHh---c-CccchhHHH---HHHHHHHH
Q psy15069 339 LAICGAATVICAFCY-----NYVELAIYAGVFGAMIGAYVGLT---SVIL--VDL---L-GLDRLTNAF---GLLLLFQG 401 (461)
Q Consensus 339 ~~~~~~~~~~~~~~~-----~~~~~~~~~~l~g~~~~~~~~~~---~~~~--~~~---~-~~~~~~~~~---g~~~~~~~ 401 (461)
..+++..++.+...+ +..++..+.++ ....+.+..+. ..+. .|+ . ..+.++... +.....=.
T Consensus 107 v~vagglvi~~l~~~~~~~~t~pv~t~~lvL-a~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq 185 (503)
T KOG2601|consen 107 VIVAGGLVITLLVHKDLKSATSPVFTVCLVL-ANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQ 185 (503)
T ss_pred HHHHHHHHhhheeecchhcccccHHHHHHHH-HHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhh
Confidence 333333222222222 33333322222 22222222221 1111 111 1 223333333 33333444
Q ss_pred hhhhhccceeeeeecccCCchHHHHHHhHHHHHH
Q psy15069 402 IASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVS 435 (461)
Q Consensus 402 ~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~ 435 (461)
.-..+.|.+.|.+.... +-+..-.+.++..++.
T Consensus 186 ~tn~Lapv~tg~Iitfv-sl~~~~g~f~~w~~vs 218 (503)
T KOG2601|consen 186 STNLLAPVITGLIITFV-SLRASAGTFAAWALVS 218 (503)
T ss_pred hhhchhhhhhcccceee-chhhhhhhhHHHHHHH
Confidence 56788999999998864 4555555555555543
No 303
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=63.79 E-value=10 Score=28.99 Aligned_cols=32 Identities=19% Similarity=0.068 Sum_probs=22.5
Q ss_pred cchhHHHHHHHHHHHhhhhhccceeeeeeccc
Q psy15069 387 DRLTNAFGLLLLFQGIASLVGPPIAGFLYDST 418 (461)
Q Consensus 387 ~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~ 418 (461)
..++.+.++--..-.+++++-....||+.|++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566666666666677777677779999976
No 304
>KOG3880|consensus
Probab=61.45 E-value=14 Score=34.64 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=50.1
Q ss_pred HhhcccchhhHHHHhhccccccccccchhHHHHHHh-hhhccchhhhhhhccchhhhHHHHhHHHHH
Q psy15069 69 VSVFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTC-YFERLRSLATGIAVCGSGLGTIIFAPIIDY 134 (461)
Q Consensus 69 l~~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~-~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~ 134 (461)
...+.+++|...+.. +.-|+-.|..|+....-+.+ .-|++|-.+|+....+-++|..++..++-.
T Consensus 335 ~~~ftpsi~ivf~lI-~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 335 WYWFTPSIWIVFALI-LFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHhccHHHHHHHHH-HHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 356677888777653 67798888889888776655 448999999999999999998777666543
No 305
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=59.88 E-value=85 Score=29.19 Aligned_cols=79 Identities=11% Similarity=0.170 Sum_probs=38.1
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069 352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA 431 (461)
Q Consensus 352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~ 431 (461)
.++.|.+.+.+++.+|+.++... ++ .|+...|+......+-++.+|.-.. +.. .....+.+.+++
T Consensus 20 ~~~~~l~~~~~~~~~F~~~ml~~---------~G--~r~~~i~~~~Ll~~v~t~~~~~~~~---~~~-~~~~l~~~Gglw 84 (284)
T PF12805_consen 20 FPYPWLLILVLALLTFFFGMLGV---------YG--PRAATIGFATLLVAVYTMAGPSPGP---EAL-EHALLFLAGGLW 84 (284)
T ss_pred hhccHHHHHHHHHHHHHHHHHHH---------Hh--hHHHHHHHHHHHHHHHHHhCCCcch---HHH-HHHHHHHHHHHH
Confidence 34555666666666655443211 22 2445556555555555555554422 111 123344455555
Q ss_pred HHHHHHHHHHHHHh
Q psy15069 432 IFVSGVMLFVIPSL 445 (461)
Q Consensus 432 ~l~~~~~~~~~~~~ 445 (461)
..+..++++.+.+.
T Consensus 85 y~~lsl~~~~l~p~ 98 (284)
T PF12805_consen 85 YLLLSLLWWPLRPY 98 (284)
T ss_pred HHHHHHHHHHHcCC
Confidence 65555555554443
No 306
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=58.17 E-value=14 Score=29.29 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=9.0
Q ss_pred HHhHHHHHHHHHHHHHHHhhHhH
Q psy15069 427 LAGGAIFVSGVMLFVIPSLQSYL 449 (461)
Q Consensus 427 ~~~~~~l~~~~~~~~~~~~~~~~ 449 (461)
+++++.++.+++.|++++.+|+.
T Consensus 73 v~aGvIg~Illi~y~irR~~Kk~ 95 (122)
T PF01102_consen 73 VMAGVIGIILLISYCIRRLRKKS 95 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHS---
T ss_pred HHHHHHHHHHHHHHHHHHHhccC
Confidence 33333333344455555555443
No 307
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=57.60 E-value=1.6e+02 Score=31.55 Aligned_cols=143 Identities=8% Similarity=0.041 Sum_probs=64.1
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCc--chhH--HHHHHHHHHHHHHHHhhhhhhHHHHHHHH-HHHhhhhhhHHHHHHHH
Q psy15069 305 LISIVGAANMVSRVILGYISDRPCV--NRLY--IYNGCLAICGAATVICAFCYNYVELAIYA-GVFGAMIGAYVGLTSVI 379 (461)
Q Consensus 305 ~~~~~~~~~~~g~~~~g~l~dr~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~~~~~~~~~ 379 (461)
...+..+.++++.++.-.+.||.-. .+.. ++.+++++..+.-.++.+..++......- .=.++... .+--...+
T Consensus 162 ~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~-~~~hll~L 240 (709)
T COG2274 162 ASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGR-FFRHLLRL 240 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHcC
Confidence 3334556666777778888888522 2222 22233333333222222222222221111 11111111 11112223
Q ss_pred HHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeeccc-----------CCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 380 LVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDST-----------LSYSPAFFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 380 ~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~-----------g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
-.+.++.+..|....-.+-...+-.++...+.+.+.|.. -+|..+++..+.+.+...+.++..+..+++
T Consensus 241 pl~~f~~r~~Ge~~sR~~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~ 320 (709)
T COG2274 241 PLSYFEKRSVGEIISRVRELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLRRK 320 (709)
T ss_pred cHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345577677777777666666665555444444444421 135555555555444444444444444443
No 308
>KOG3810|consensus
Probab=52.76 E-value=4.7 Score=38.32 Aligned_cols=121 Identities=11% Similarity=0.137 Sum_probs=75.9
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHh
Q psy15069 323 ISDRPCVNRLYIYNGCLAICGAATVICAFCYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGI 402 (461)
Q Consensus 323 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 402 (461)
+.|....++..++. .+.......++.+.++.+.+-+.-+.+|...+. ....++++-..++++++-++.|......-.
T Consensus 65 LTD~lrYKPvivlq--~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~ 141 (433)
T KOG3810|consen 65 LTDYLRYKPVVVLQ--ALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLV 141 (433)
T ss_pred Hhhhhhcceeeeee--ccchhHHHHHHHhcCCchheeeehhhcChHHHH-HHhhhheeeeecCHHHHHHHHHHhHHHHHH
Confidence 56764344443322 112222334445678888888788888876543 344566777888999999999999998888
Q ss_pred hhhhccceeeeeeccc-CCchHHHHHHhHHHHHHHHHHHHHHHhh
Q psy15069 403 ASLVGPPIAGFLYDST-LSYSPAFFLAGGAIFVSGVMLFVIPSLQ 446 (461)
Q Consensus 403 g~~~gp~i~g~l~~~~-g~~~~~f~~~~~~~l~~~~~~~~~~~~~ 446 (461)
|-.+|..++..+.... -+|...=.+.-....++.++.+++|+.+
T Consensus 142 g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 142 GKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCc
Confidence 8888888877776532 1344333343344445555566666655
No 309
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=50.25 E-value=2e+02 Score=26.26 Aligned_cols=13 Identities=8% Similarity=0.123 Sum_probs=5.6
Q ss_pred CCchhhHHHHHHH
Q psy15069 297 VTRSNASSLISIV 309 (461)
Q Consensus 297 ~s~~~~~~~~~~~ 309 (461)
-|......+++-+
T Consensus 215 as~~~ldYvFs~f 227 (254)
T PF07857_consen 215 ASQNGLDYVFSHF 227 (254)
T ss_pred CCCcchheeHHHH
Confidence 3444444444433
No 310
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=47.27 E-value=2e+02 Score=25.23 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=12.1
Q ss_pred HHHHHhhhhhccceeeeeecccC
Q psy15069 397 LLFQGIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 397 ~~~~~~g~~~gp~i~g~l~~~~g 419 (461)
.....++-.+|..+++.+.+..+
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33334444455555566666665
No 311
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=46.35 E-value=1.6e+02 Score=29.08 Aligned_cols=37 Identities=19% Similarity=0.398 Sum_probs=23.7
Q ss_pred ccchhhhhhhccchhhhHHHHhHHHHHHHHhhchhHH
Q psy15069 108 RLRSLATGIAVCGSGLGTIIFAPIIDYTVREYGWKIT 144 (461)
Q Consensus 108 ~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~gw~~~ 144 (461)
-+|.+...+...+.-++.++-|++..+.-..-||-..
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gwl~~ 143 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGWLAQ 143 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHHHHH
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEecchhhcc
Confidence 4566666666666667777888877766544455433
No 312
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=46.06 E-value=29 Score=26.64 Aligned_cols=53 Identities=15% Similarity=0.109 Sum_probs=46.0
Q ss_pred CCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc
Q psy15069 21 GDGVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA 73 (461)
Q Consensus 21 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~ 73 (461)
.+...|=+++.+...+...+++.+..+|+.-+.+-=..|..++.++..+..+.
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 34678889999999999999999999999999999888888888888766554
No 313
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=45.87 E-value=33 Score=26.33 Aligned_cols=37 Identities=14% Similarity=0.220 Sum_probs=29.1
Q ss_pred chhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHH
Q psy15069 299 RSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIY 335 (461)
Q Consensus 299 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~ 335 (461)
++..|-.++.++...++.++++++..|+....+-=..
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~i 89 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWI 89 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHH
Confidence 3667889999999999999999999999544443343
No 314
>PRK10263 DNA translocase FtsK; Provisional
Probab=44.05 E-value=37 Score=38.35 Aligned_cols=19 Identities=11% Similarity=0.109 Sum_probs=12.2
Q ss_pred HhhhhhccceeeeeecccC
Q psy15069 401 GIASLVGPPIAGFLYDSTL 419 (461)
Q Consensus 401 ~~g~~~gp~i~g~l~~~~g 419 (461)
..|+++|..+...+...+|
T Consensus 141 ~gGGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3467777777666666554
No 315
>PRK02237 hypothetical protein; Provisional
Probab=41.22 E-value=54 Score=25.28 Aligned_cols=36 Identities=8% Similarity=0.106 Sum_probs=28.6
Q ss_pred hhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHH
Q psy15069 300 SNASSLISIVGAANMVSRVILGYISDRPCVNRLYIY 335 (461)
Q Consensus 300 ~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~ 335 (461)
+..|-+++.++...++.++++++..|+....+-=..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~i 91 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWI 91 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHH
Confidence 458889999999999999999999998544443343
No 316
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=39.58 E-value=2.3e+02 Score=29.07 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=16.2
Q ss_pred HHhC-CCchhhHHHHHH----HhhhhhhhhhhhhhccCCC
Q psy15069 293 EQRG-VTRSNASSLISI----VGAANMVSRVILGYISDRP 327 (461)
Q Consensus 293 ~~~g-~s~~~~~~~~~~----~~~~~~~g~~~~g~l~dr~ 327 (461)
...| +++..-|.+.+. +.+.+.++....+++...+
T Consensus 285 a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~ 324 (521)
T PF02990_consen 285 AALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSF 324 (521)
T ss_pred HHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 4444 344434444444 4444555555555555544
No 317
>KOG4830|consensus
Probab=38.87 E-value=35 Score=31.26 Aligned_cols=56 Identities=20% Similarity=0.367 Sum_probs=46.2
Q ss_pred HHHHHHHHhhccccchhhHhhHHHHhCCCchhhHHHHHHHhhhhhhhhhhhhhccC
Q psy15069 270 FTISNIFTSIGFNVPYVYIVKLAEQRGVTRSNASSLISIVGAANMVSRVILGYISD 325 (461)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d 325 (461)
.-++-+..-......++|+-.|+++.|.++...+.++.+..+...+..++.|...|
T Consensus 22 yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d 77 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSD 77 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhccccccccc
Confidence 45556666666677888999999999999999999999999999999999886554
No 318
>COG3619 Predicted membrane protein [Function unknown]
Probab=38.78 E-value=2.9e+02 Score=24.75 Aligned_cols=43 Identities=16% Similarity=0.111 Sum_probs=22.0
Q ss_pred HHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHH
Q psy15069 395 LLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVML 439 (461)
Q Consensus 395 ~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~ 439 (461)
......-++.++|...++.+....|.+ .++....+.+......
T Consensus 172 ~~~~~~il~f~~GAi~g~ll~~~~g~~--al~~~~~~i~~~~~~~ 214 (226)
T COG3619 172 LIYLSLILSFIVGAICGALLTLFFGLK--ALWVVAALILAVYLLA 214 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHH
Confidence 334444455556666666666555533 5555555444444333
No 319
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=37.95 E-value=1.2e+02 Score=27.95 Aligned_cols=45 Identities=13% Similarity=0.133 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHhhhhh-ccceeeeeecccCCchHHHHHHhHHHHHHHH
Q psy15069 390 TNAFGLLLLFQGIASLV-GPPIAGFLYDSTLSYSPAFFLAGGAIFVSGV 437 (461)
Q Consensus 390 ~~~~g~~~~~~~~g~~~-gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~ 437 (461)
++++-+....+-++..+ |-.+.| +..+..+..+-+.+++.++...
T Consensus 72 S~tmPiStg~QLvg~sl~gv~~fg---EW~~~~~~~~G~~Al~liiiGv 117 (269)
T PF06800_consen 72 SKTMPISTGLQLVGTSLIGVLFFG---EWTTTTQKIIGFLALVLIIIGV 117 (269)
T ss_pred eeeeccchhHHHHHHHHHHHhhcC---CCCCcchHHHHHHHHHHHHHHH
Confidence 34444444444444332 223322 2222334455555554444433
No 320
>COG4769 Predicted membrane protein [Function unknown]
Probab=37.40 E-value=53 Score=27.45 Aligned_cols=48 Identities=15% Similarity=0.238 Sum_probs=31.7
Q ss_pred hhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccc
Q psy15069 36 TLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLG 90 (461)
Q Consensus 36 ~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g 90 (461)
..+.+...-++..++|+|.+-+.|.-. .-+|.+|+.++.++ +++.+--
T Consensus 86 G~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLiva-s~Lv~~~ 133 (181)
T COG4769 86 GAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVA-SFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHH-HHHHhcc
Confidence 344555566778999999986655432 23566888888876 6665543
No 321
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=36.91 E-value=2.9e+02 Score=24.16 Aligned_cols=34 Identities=21% Similarity=0.051 Sum_probs=18.4
Q ss_pred hccchhhhHHHHhHHHHHHHHhhchhHHHHHHHHH
Q psy15069 117 AVCGSGLGTIIFAPIIDYTVREYGWKITLLVLSVT 151 (461)
Q Consensus 117 ~~~~~~lg~~i~~~l~~~l~~~~gw~~~f~i~~~~ 151 (461)
.....-++.++|..++..+.+..|.+ ++++..++
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 34444455556666666666667754 44444333
No 322
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=36.53 E-value=1.3e+02 Score=30.27 Aligned_cols=14 Identities=14% Similarity=0.403 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHHH
Q psy15069 146 LVLSVTVLSAVLFG 159 (461)
Q Consensus 146 ~i~~~~~l~~~i~~ 159 (461)
.++..+.+...++.
T Consensus 6 ~il~iiiv~~~ilt 19 (465)
T PF03606_consen 6 VILFIIIVFAAILT 19 (465)
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 323
>PRK02237 hypothetical protein; Provisional
Probab=36.46 E-value=63 Score=24.96 Aligned_cols=51 Identities=16% Similarity=0.085 Sum_probs=44.3
Q ss_pred ccHHHHHHHHHHhhhhhhHhhHhhhhhcCcceeeehhhHHHHHHHHHhhcc
Q psy15069 23 GVTSWIASILVGVTLCSGPISSAFVNKYGCRNVTICGAILGSACLAVSVFA 73 (461)
Q Consensus 23 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~ 73 (461)
+..|=+++.+...+.+.+++.+..+|+.-+-+-=.+|..++.++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 458889999999999999999999999999888888888888887665544
No 324
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=35.08 E-value=5.1e+02 Score=27.80 Aligned_cols=77 Identities=8% Similarity=-0.033 Sum_probs=34.6
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCc--hHHHHHHh
Q psy15069 352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSY--SPAFFLAG 429 (461)
Q Consensus 352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~--~~~f~~~~ 429 (461)
.+..|.+...+++.+++.++... .++ |....++..+.-.+-.++|+-..+ . .| ...+...+
T Consensus 78 ~~~p~~~~~~l~~~tf~~~mlga---------~G~--r~~~I~f~~L~~aiytml~~~~~~----~--w~~~pllll~Ga 140 (701)
T TIGR01667 78 FPKPWLFPFLLTLLTFGFILLGA---------LGQ--RYATIAFASLLAAIYTMLGAGEVP----V--WFIEPLLILAGT 140 (701)
T ss_pred hcchHHHHHHHHHHHHHHHHHHH---------hhh--hHHhHHHHHHHHHHHHHcCccccc----H--HHHHHHHHHHHH
Confidence 34555666666666665443222 222 333344444444455555543221 0 12 22344455
Q ss_pred HHHHHHHHHHHHHHHh
Q psy15069 430 GAIFVSGVMLFVIPSL 445 (461)
Q Consensus 430 ~~~l~~~~~~~~~~~~ 445 (461)
+.+.+..++++.+.+.
T Consensus 141 lwY~l~sll~~~l~p~ 156 (701)
T TIGR01667 141 LWYGLLTLIWFLLFPN 156 (701)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 5555555555554433
No 325
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=33.47 E-value=56 Score=25.85 Aligned_cols=24 Identities=17% Similarity=0.312 Sum_probs=13.5
Q ss_pred cccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 416 DSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 416 ~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
|.+ .|++..+..++++++..++++
T Consensus 31 D~t-pWNysiL~Ls~vvlvi~~~LL 54 (125)
T PF15048_consen 31 DAT-PWNYSILALSFVVLVISFFLL 54 (125)
T ss_pred CCC-CcchHHHHHHHHHHHHHHHHH
Confidence 444 477777666665555444433
No 326
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.17 E-value=1.4e+02 Score=23.10 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=25.9
Q ss_pred hccchhhhhhhccchhhhHHHHhHHHHHHHHhh
Q psy15069 107 ERLRSLATGIAVCGSGLGTIIFAPIIDYTVREY 139 (461)
Q Consensus 107 ~~~rg~a~gi~~~~~~lg~~i~~~l~~~l~~~~ 139 (461)
++.++.+.++-.+.--+++++.....+++.+.|
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356777888887887888888888888888876
No 327
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=32.11 E-value=18 Score=34.25 Aligned_cols=104 Identities=13% Similarity=-0.053 Sum_probs=3.0
Q ss_pred HHHHHHHHhhhhhhHhhHhhhhh-cCcceeeehhhHHHHHH---HHHhh----------cccchhhHHHHhhcccccccc
Q psy15069 27 WIASILVGVTLCSGPISSAFVNK-YGCRNVTICGAILGSAC---LAVSV----------FAKNVITLCITIGFGTGLGFG 92 (461)
Q Consensus 27 ~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~g~~~~~~~---~~l~~----------~~~~~~~l~i~~~~l~G~g~~ 92 (461)
..+.+++++-.++..+.+...-+ -.+|.+.. ..+.=.+. .++|. +.+|-+..++. -++.|+..|
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~-~~l~g~TNG 263 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIIL-MLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHH-HHHHHHccc
Confidence 45778888888888877764211 13444433 22222222 22231 12344455543 578899998
Q ss_pred ccchhHHHHHHhhh-hccchhhhhhhccchhhhHHHHhHHH
Q psy15069 93 LIYLPAIVSVTCYF-ERLRSLATGIAVCGSGLGTIIFAPII 132 (461)
Q Consensus 93 ~~~~~~~~~~~~~f-~~~rg~a~gi~~~~~~lg~~i~~~l~ 132 (461)
-....++....+.. +++|..+..+......+|..+|..++
T Consensus 264 yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---HHHH----------------------------------
T ss_pred hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777766 67888888777777777776665544
No 328
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=30.50 E-value=2.6e+02 Score=27.07 Aligned_cols=87 Identities=17% Similarity=0.039 Sum_probs=54.8
Q ss_pred cCCCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcc-ee---eehhhHHHHHHHHH-hhccc----chhhHHHHhhccccc
Q psy15069 19 QEGDGVTSWIASILVGVTLCSGPISSAFVNKYGCR-NV---TICGAILGSACLAV-SVFAK----NVITLCITIGFGTGL 89 (461)
Q Consensus 19 ~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r-~~---~~~g~~~~~~~~~l-~~~~~----~~~~l~i~~~~l~G~ 89 (461)
|-..-+.+++.+.+...+++++..+-++.|.--.- .+ ...|.+......++ ..|+. +-+.++.. .++.|.
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~l-t~vIG~ 117 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYAL-TAVIGV 117 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHH-HHHHHH
Confidence 55677899999999999999988887776643332 22 22233222222222 23443 44555654 577788
Q ss_pred cccccchhHHHHHHhhh
Q psy15069 90 GFGLIYLPAIVSVTCYF 106 (461)
Q Consensus 90 g~~~~~~~~~~~~~~~f 106 (461)
-.|+-.|..+.+..+..
T Consensus 118 LVG~EiPL~mrml~~r~ 134 (508)
T COG4262 118 LVGAEIPLLMRMLQRRQ 134 (508)
T ss_pred HHhcchHHHHHHHHHHH
Confidence 78888888888777733
No 329
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=30.31 E-value=4.1e+02 Score=28.50 Aligned_cols=76 Identities=8% Similarity=-0.058 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCc-h-HHHHHHh
Q psy15069 352 CYNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSY-S-PAFFLAG 429 (461)
Q Consensus 352 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~-~-~~f~~~~ 429 (461)
.+..|++...+++.+++.++... .+++ ....+.......+-.++|+-..+ ..| + ..+...+
T Consensus 78 ~~~p~lf~~~l~~~tf~~~mlga---------~G~R--ya~Iaf~tLliaiytmlg~~~~~------~w~~~pllll~Ga 140 (704)
T TIGR01666 78 FGKPWLFAVGLTVSTFGFIMLGA---------VGQR--YATIAFGSLLVALYTMLGYIEVN------VWFIQPVMLLCGT 140 (704)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHH---------hhhh--HHHHHHHHHHHHHHHHhcccccc------hHHHHHHHHHHHH
Confidence 34556666666666655443222 2323 33444444444455555542211 113 2 2334455
Q ss_pred HHHHHHHHHHHHHHH
Q psy15069 430 GAIFVSGVMLFVIPS 444 (461)
Q Consensus 430 ~~~l~~~~~~~~~~~ 444 (461)
+.+.+..++++.+.+
T Consensus 141 lwY~llsl~~~~l~p 155 (704)
T TIGR01666 141 LWYSVVTLIVHLFFP 155 (704)
T ss_pred HHHHHHHHHHHHHcC
Confidence 555555555554433
No 330
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=29.30 E-value=2.5e+02 Score=25.56 Aligned_cols=61 Identities=11% Similarity=0.201 Sum_probs=32.8
Q ss_pred hcccchhhHHHHhhccccccccccchhHHHHHHhhhhccchhhhhhhccchhhhHHHHhHHHHHH
Q psy15069 71 VFAKNVITLCITIGFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIAVCGSGLGTIIFAPIIDYT 135 (461)
Q Consensus 71 ~~~~~~~~l~i~~~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~~~~~~lg~~i~~~l~~~l 135 (461)
.++.|....+.+ ++..|+- .......-...+..| +|+....+...++++|..+...+...+
T Consensus 29 ~LS~s~~FyY~s-g~~lGv~--~s~li~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~~nl 89 (249)
T PF10225_consen 29 SLSRSVLFYYSS-GISLGVL--ASLLILLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLWENL 89 (249)
T ss_pred HhccChhHHHhh-hHHHHHH--HHHHHHHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHHHHH
Confidence 345566666643 4444442 222223334566778 555566667777777765555554443
No 331
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=28.39 E-value=5.9e+02 Score=25.16 Aligned_cols=45 Identities=18% Similarity=0.122 Sum_probs=19.0
Q ss_pred HHhhhhhhHHHHHHHHHHHhcCccchhHHHHHHHHHHHhhhhhcc
Q psy15069 364 VFGAMIGAYVGLTSVILVDLLGLDRLTNAFGLLLLFQGIASLVGP 408 (461)
Q Consensus 364 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~gp 408 (461)
+.|+..+.........+.+..+-++.--+.++-...+-+|.+..+
T Consensus 284 viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~g 328 (403)
T TIGR00836 284 IIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATG 328 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHH
Confidence 344444433333333344554444433344444444444444433
No 332
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=28.22 E-value=3.6e+02 Score=24.70 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHH--HHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHH
Q psy15069 354 NYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNA--FGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGA 431 (461)
Q Consensus 354 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~ 431 (461)
..|..+....+.=...|.-+....+++.+.+|+++|-++ +|+.... +--++.-..+.++.+. |.+.+...+..
T Consensus 15 ~~~~~l~tl~~lE~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~--v~R~~ll~~~s~Ll~l---~~~l~~~fg~~ 89 (254)
T COG0861 15 AAWVALLTLILLEIVLGIDNAIVIAILASKLPPKQRKKALFIGLAGAL--VLRIILLASISWLLTL---TQPLLYIFGLY 89 (254)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHh---hHHHHHHHHHH
Confidence 333344444555556777888888889999998766554 4543322 1112222223445543 55566664444
Q ss_pred HHH
Q psy15069 432 IFV 434 (461)
Q Consensus 432 ~l~ 434 (461)
.+-
T Consensus 90 L~~ 92 (254)
T COG0861 90 LLW 92 (254)
T ss_pred HHH
Confidence 333
No 333
>COG3619 Predicted membrane protein [Function unknown]
Probab=28.11 E-value=4.4e+02 Score=23.61 Aligned_cols=32 Identities=9% Similarity=0.185 Sum_probs=18.6
Q ss_pred CCccHHHHHHHHHHhhhhhhHhhHhhhhhcCcc
Q psy15069 21 GDGVTSWIASILVGVTLCSGPISSAFVNKYGCR 53 (461)
Q Consensus 21 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G~r 53 (461)
.+........+..+...++ .+.+.+..|..+|
T Consensus 53 ~~~~~a~~~~~pii~Fv~G-v~~~~~~~r~~~~ 84 (226)
T COG3619 53 GDAALAVLLLLPILAFVLG-VAAAELISRRATR 84 (226)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcc
Confidence 3445566666667777666 4455555555554
No 334
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=27.84 E-value=1.2e+02 Score=24.21 Aligned_cols=28 Identities=7% Similarity=0.173 Sum_probs=14.9
Q ss_pred chHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 421 YSPAFFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 421 ~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
...+++-.|.+.++...++|....++|+
T Consensus 83 ~G~vlLs~GLmlL~~~alcW~~~~rkK~ 110 (129)
T PF15099_consen 83 FGPVLLSLGLMLLACSALCWKPIIRKKK 110 (129)
T ss_pred ehHHHHHHHHHHHHhhhheehhhhHhHH
Confidence 3456666666666666455544433333
No 335
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=26.78 E-value=2.1e+02 Score=23.34 Aligned_cols=54 Identities=7% Similarity=0.048 Sum_probs=31.9
Q ss_pred HHHhcCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHHHHHHH
Q psy15069 380 LVDLLGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIP 443 (461)
Q Consensus 380 ~~~~~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~ 443 (461)
+.+++|+..|....+..+......... +...| +.++++....+++++.+.+-+-
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k~~--------~~~~g--~a~Wi~tTSallLgvPl~l~ie 113 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVKSL--------FSFSG--KALWIVTTSALLLGVPLALEIE 113 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHH--------HHhcc--hhHHHHHHHHHHHHHHHHHHHH
Confidence 579999999999888887665554322 22334 3344444444455555555443
No 336
>COG0733 Na+-dependent transporters of the SNF family [General function prediction only]
Probab=26.41 E-value=6.6e+02 Score=25.08 Aligned_cols=40 Identities=25% Similarity=0.468 Sum_probs=22.2
Q ss_pred ccccccchhHHHHHHHHHHHh--hccccchhhHhhHH-HHhCCC
Q psy15069 258 DMELLRDPIFILFTISNIFTS--IGFNVPYVYIVKLA-EQRGVT 298 (461)
Q Consensus 258 ~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~g~s 298 (461)
+.+-++|++.|...++..+.. .+.....+| ..|+ ++.++.
T Consensus 206 D~s~l~~~~v~~~AlGQ~FFsLSlG~g~mitY-sSYL~k~~~l~ 248 (439)
T COG0733 206 DFSKLTDPKVWLAALGQAFFSLSLGFGIMITY-SSYLSKKSDLV 248 (439)
T ss_pred CHHHcCchhhHHHHHHHHHHHHHHHHHHHHHH-HhhcCcccchh
Confidence 345578888888777654433 333344443 3455 554543
No 337
>PRK15015 carbon starvation protein A; Provisional
Probab=26.31 E-value=8e+02 Score=26.01 Aligned_cols=40 Identities=15% Similarity=0.261 Sum_probs=21.8
Q ss_pred hhhccchhhhhhhc-cchhhhHHHHhHHHHHHHHhhchh-HHHHHH
Q psy15069 105 YFERLRSLATGIAV-CGSGLGTIIFAPIIDYTVREYGWK-ITLLVL 148 (461)
Q Consensus 105 ~f~~~rg~a~gi~~-~~~~lg~~i~~~l~~~l~~~~gw~-~~f~i~ 148 (461)
+.|.+|-...|-.. +..+.|+++||.++. .+||- ...|++
T Consensus 80 YvPt~k~VLfGHHFasIAGAGPivGPvlAa----~~GwlP~~LWIl 121 (701)
T PRK15015 80 YVPTDKKVLFGHHFAAIAGAGPLVGPVLAA----QMGYLPGMIWLL 121 (701)
T ss_pred cCcCCccchhHHHHHHHhccCccHHHHHHH----HHcchHHHHHHH
Confidence 34644444444433 335667777777666 37885 444433
No 338
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=25.92 E-value=5.6e+02 Score=25.35 Aligned_cols=46 Identities=11% Similarity=0.056 Sum_probs=34.9
Q ss_pred ccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCC
Q psy15069 280 GFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDR 326 (461)
Q Consensus 280 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 326 (461)
..+.-....|... ... +++++...+.+..-+...++.++-+...++
T Consensus 17 ~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~ 63 (415)
T TIGR00801 17 AMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGG 63 (415)
T ss_pred HHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 3334444556666 556 899999999999999999999998887776
No 339
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=25.79 E-value=1.1e+02 Score=23.55 Aligned_cols=33 Identities=12% Similarity=0.037 Sum_probs=25.1
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy15069 136 VREYGWKITLLVLSVTVLSAVLFGILLRPLEEQ 168 (461)
Q Consensus 136 ~~~~gw~~~f~i~~~~~l~~~i~~~~~~~~~~~ 168 (461)
.+..+|+.+|++.-.++++.+.+.+.+.|+...
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 345699999998877877777777777777644
No 340
>PTZ00370 STEVOR; Provisional
Probab=25.26 E-value=1.6e+02 Score=27.30 Aligned_cols=32 Identities=9% Similarity=-0.063 Sum_probs=15.5
Q ss_pred CCchHHHHHHhHHHHHHHHHHHHHHHhhHhHh
Q psy15069 419 LSYSPAFFLAGGAIFVSGVMLFVIPSLQSYLL 450 (461)
Q Consensus 419 g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~ 450 (461)
..|..+-++.-++.++..++.+++.+++++..
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK~sw 286 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRKNSW 286 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 34555555555554454555444444444333
No 341
>PRK10297 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; Provisional
Probab=24.81 E-value=64 Score=32.36 Aligned_cols=38 Identities=8% Similarity=-0.010 Sum_probs=18.9
Q ss_pred eeeeeecccCCchHHHHHHhHHHHHHHHHHHHHHHhhHh
Q psy15069 410 IAGFLYDSTLSYSPAFFLAGGAIFVSGVMLFVIPSLQSY 448 (461)
Q Consensus 410 i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~~~~~~~~~ 448 (461)
+.|++. ..|+|+...+-...+.+...+-.-+++..+|+
T Consensus 396 l~~fl~-t~g~~~~~ilq~v~lvi~~lIY~PFvK~~dk~ 433 (452)
T PRK10297 396 LGAFFN-TNGSVAALLVALFNLGIATLIYLPFVVVANKA 433 (452)
T ss_pred HHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344443 23678877765544444333334445544443
No 342
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=24.01 E-value=2.6e+02 Score=26.05 Aligned_cols=50 Identities=28% Similarity=0.398 Sum_probs=26.5
Q ss_pred hccccccccccchhHHHHHHhhhhccchhhhhhh--ccchhhhHHHHhHHHHHH
Q psy15069 84 GFGTGLGFGLIYLPAIVSVTCYFERLRSLATGIA--VCGSGLGTIIFAPIIDYT 135 (461)
Q Consensus 84 ~~l~G~g~~~~~~~~~~~~~~~f~~~rg~a~gi~--~~~~~lg~~i~~~l~~~l 135 (461)
|.+.|+-. ..+.+++++++..||+++.. .++- ..+.+++..+.|.++-.+
T Consensus 26 r~~~g~~~-vlf~PGy~l~~~lfp~~~~l-~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 26 RVILGFPF-VLFLPGYALVAALFPRKHDL-DGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred HHHHHHHH-HHHhccHHHHHHHccCcCCC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655543 34578888999999854322 2222 223344444454444443
No 343
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=23.15 E-value=6.4e+02 Score=23.76 Aligned_cols=23 Identities=9% Similarity=0.069 Sum_probs=13.1
Q ss_pred HhhccccchhhHhhHH-HHhCCCc
Q psy15069 277 TSIGFNVPYVYIVKLA-EQRGVTR 299 (461)
Q Consensus 277 ~~~~~~~~~~~~~~~~-~~~g~s~ 299 (461)
..........+..+|. .+.|.|.
T Consensus 52 ~~~~iq~~vN~~NdY~D~~KG~D~ 75 (303)
T COG1575 52 AAILLQILVNLANDYFDYKKGTDT 75 (303)
T ss_pred HHHHHHHHHHHHHhhhhhhcCCCC
Confidence 3333344456677777 4567764
No 344
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=22.94 E-value=1.2e+02 Score=22.94 Aligned_cols=22 Identities=23% Similarity=0.152 Sum_probs=15.3
Q ss_pred chHHHHHHhHHHHHHHHHHHHH
Q psy15069 421 YSPAFFLAGGAIFVSGVMLFVI 442 (461)
Q Consensus 421 ~~~~f~~~~~~~l~~~~~~~~~ 442 (461)
|-.+|.+.+++.+.+.......
T Consensus 52 WIFAFvI~avlfv~sl~vav~~ 73 (97)
T PF08611_consen 52 WIFAFVIAAVLFVLSLVVAVPK 73 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 7777878887777776665443
No 345
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=22.81 E-value=7.5e+02 Score=24.46 Aligned_cols=29 Identities=24% Similarity=0.149 Sum_probs=14.0
Q ss_pred HhcCccchhHHHHHHHHHHHhhhhhccce
Q psy15069 382 DLLGLDRLTNAFGLLLLFQGIASLVGPPI 410 (461)
Q Consensus 382 ~~~~~~~~~~~~g~~~~~~~~g~~~gp~i 410 (461)
+..+-++---+.++-...+-.|.+..+..
T Consensus 315 ~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 343 (404)
T TIGR03644 315 DKLKIDDPVGAISVHGVAGIWGTLVVPIT 343 (404)
T ss_pred HhCCCCCCcCchHhhhHHHHHHHHHHHHh
Confidence 44454554445555554444454444443
No 346
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=22.57 E-value=2.3e+02 Score=21.93 Aligned_cols=54 Identities=13% Similarity=0.063 Sum_probs=33.1
Q ss_pred HhhHhhhhhcCcceeeehhhHHHHHHHHHhhcccchhhHHHHhhcccccccccc
Q psy15069 41 PISSAFVNKYGCRNVTICGAILGSACLAVSVFAKNVITLCITIGFGTGLGFGLI 94 (461)
Q Consensus 41 ~~~g~l~dr~G~r~~~~~g~~~~~~~~~l~~~~~~~~~l~i~~~~l~G~g~~~~ 94 (461)
-..=...|.+.|+.-.+...+...+++.+.+.+-....+-++|-+-.|+|....
T Consensus 18 ~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~ 71 (106)
T COG2076 18 TTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGT 71 (106)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHH
Confidence 334455677777777777777777777766666444444445556666665443
No 347
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=22.39 E-value=8e+02 Score=24.64 Aligned_cols=121 Identities=11% Similarity=-0.049 Sum_probs=69.5
Q ss_pred HHHHHhhccccchhhHhhHH-HHhCCCchhhHHHHHHHhhhhhhhhhhhhhccCCCCcchhHHHHHHHHHHHHHHHHhhh
Q psy15069 273 SNIFTSIGFNVPYVYIVKLA-EQRGVTRSNASSLISIVGAANMVSRVILGYISDRPCVNRLYIYNGCLAICGAATVICAF 351 (461)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (461)
..+-+.+..++-....|... ++.+++.++...+.+..-+.+-++.++--....+.|.+-..++..++...+........
T Consensus 21 lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~ 100 (451)
T COG2233 21 LGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGT 100 (451)
T ss_pred HHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhc
Confidence 33344445555566677777 88999999999999988888888888766644433333333333333333322221111
Q ss_pred h-hhHHHHHHHHHHHhhhhhhHHHHHHHHHHHhcCccchhHHH
Q psy15069 352 C-YNYVELAIYAGVFGAMIGAYVGLTSVILVDLLGLDRLTNAF 393 (461)
Q Consensus 352 ~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (461)
. +.....+-..+..|+.+...-+.....+.+.+||-..|...
T Consensus 101 ~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 101 TGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEe
Confidence 1 22444444445555544433333332788999988777653
No 348
>PF06716 DUF1201: Protein of unknown function (DUF1201); InterPro: IPR009591 This entry consists of several Beet yellows virus (BYV) putative membrane-binding proteins of around 54 residues in length. The function of this currently unknown.
Probab=21.37 E-value=2.2e+02 Score=18.03 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=8.7
Q ss_pred HHHHhHHHHHHHHHHHHHHHh
Q psy15069 425 FFLAGGAIFVSGVMLFVIPSL 445 (461)
Q Consensus 425 f~~~~~~~l~~~~~~~~~~~~ 445 (461)
|+++-.+.++...++++.+..
T Consensus 15 ~lIC~Fl~~~~~F~~F~~Kqi 35 (54)
T PF06716_consen 15 FLICLFLFCLVVFIWFVYKQI 35 (54)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444444444433
No 349
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=20.92 E-value=2.7e+02 Score=24.46 Aligned_cols=55 Identities=16% Similarity=0.088 Sum_probs=25.2
Q ss_pred cCccchhHHHHHHHHHHHhhhhhccceeeeeecccCCchHHHHHHhHHHHHHHHH
Q psy15069 384 LGLDRLTNAFGLLLLFQGIASLVGPPIAGFLYDSTLSYSPAFFLAGGAIFVSGVM 438 (461)
Q Consensus 384 ~~~~~~~~~~g~~~~~~~~g~~~gp~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~ 438 (461)
.++++|-+..--......+-..+....+.++.+..|---..|-+.|.+.+...-+
T Consensus 31 ~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~ 85 (203)
T PF01914_consen 31 MSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIAL 85 (203)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 3444443333333333333333344444556666664445666666655544333
No 350
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=20.09 E-value=38 Score=24.41 Aligned_cols=30 Identities=20% Similarity=0.544 Sum_probs=18.0
Q ss_pred cceeeeeecccCCchHHHHHHhHHHHHHHHHHH
Q psy15069 408 PPIAGFLYDSTLSYSPAFFLAGGAIFVSGVMLF 440 (461)
Q Consensus 408 p~i~g~l~~~~g~~~~~f~~~~~~~l~~~~~~~ 440 (461)
+++.|++.+ ++...++..++..++++++..
T Consensus 24 sfi~Gy~~q---~~~~~~~~~~~g~~~~~lv~v 53 (76)
T PF06645_consen 24 SFIVGYITQ---SFSYTFYIYGAGVVLTLLVVV 53 (76)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHhhee
Confidence 445566665 466677766666666655543
Done!