Query psy15089
Match_columns 661
No_of_seqs 444 out of 4205
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 20:16:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15089.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15089hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h88_A Succinate dehydrogenase 100.0 3E-116 1E-120 991.7 65.3 612 50-661 10-621 (621)
2 2bs2_A Quinol-fumarate reducta 100.0 4E-102 1E-106 882.7 54.3 566 56-661 3-597 (660)
3 2wdq_A Succinate dehydrogenase 100.0 3E-101 1E-105 869.6 56.9 581 56-661 5-588 (588)
4 1kf6_A Fumarate reductase flav 100.0 4.3E-98 1E-102 845.6 59.1 561 56-661 3-581 (602)
5 3gyx_A Adenylylsulfate reducta 100.0 9.6E-92 3.3E-96 796.9 42.2 543 52-643 16-658 (662)
6 1chu_A Protein (L-aspartate ox 100.0 6.9E-90 2.4E-94 770.2 39.2 512 56-625 6-532 (540)
7 1jnr_A Adenylylsulfate reducta 100.0 7.3E-79 2.5E-83 694.7 48.3 535 53-642 17-636 (643)
8 2e5v_A L-aspartate oxidase; ar 100.0 2.2E-76 7.7E-81 651.7 38.4 468 60-627 1-470 (472)
9 1y0p_A Fumarate reductase flav 100.0 2E-53 6.7E-58 480.7 36.9 379 57-473 125-569 (571)
10 1d4d_A Flavocytochrome C fumar 100.0 4.6E-53 1.6E-57 476.8 37.0 379 57-473 125-570 (572)
11 1qo8_A Flavocytochrome C3 fuma 100.0 1E-52 3.4E-57 474.2 38.1 380 56-473 119-564 (566)
12 4at0_A 3-ketosteroid-delta4-5a 100.0 4.2E-50 1.4E-54 447.4 33.1 401 53-471 36-509 (510)
13 2i0z_A NAD(FAD)-utilizing dehy 100.0 3E-32 1E-36 298.4 25.8 361 57-473 25-444 (447)
14 2gqf_A Hypothetical protein HI 99.9 3E-23 1E-27 223.3 21.4 348 57-470 3-400 (401)
15 3v76_A Flavoprotein; structura 99.9 1.2E-21 4.2E-26 211.3 18.1 187 55-287 24-211 (417)
16 3cp8_A TRNA uridine 5-carboxym 99.7 4.7E-18 1.6E-22 189.5 12.5 155 55-258 18-175 (641)
17 3nlc_A Uncharacterized protein 99.6 7.8E-15 2.7E-19 162.5 23.3 155 57-258 106-278 (549)
18 4fk1_A Putative thioredoxin re 99.6 1E-15 3.6E-20 158.3 12.7 36 56-91 4-39 (304)
19 2zxi_A TRNA uridine 5-carboxym 99.6 8.5E-15 2.9E-19 162.7 17.9 154 57-259 26-182 (637)
20 3oz2_A Digeranylgeranylglycero 99.6 1.5E-14 5.2E-19 154.5 18.9 61 195-257 102-162 (397)
21 3ces_A MNMG, tRNA uridine 5-ca 99.6 2.4E-14 8.3E-19 159.7 18.9 154 57-259 27-183 (651)
22 4b1b_A TRXR, thioredoxin reduc 99.6 1.6E-15 5.5E-20 168.2 6.4 54 57-110 41-94 (542)
23 4gcm_A TRXR, thioredoxin reduc 99.6 3.7E-15 1.3E-19 154.6 8.1 35 57-91 5-39 (312)
24 3dgz_A Thioredoxin reductase 2 99.6 9.8E-16 3.3E-20 169.3 3.7 155 57-257 5-159 (488)
25 3qfa_A Thioredoxin reductase 1 99.5 4.2E-15 1.4E-19 165.3 6.4 156 56-257 30-185 (519)
26 3f8d_A Thioredoxin reductase ( 99.5 2.4E-14 8.4E-19 148.6 10.8 111 58-257 15-125 (323)
27 4a5l_A Thioredoxin reductase; 99.5 3.8E-15 1.3E-19 154.4 3.2 35 57-91 3-37 (314)
28 3lzw_A Ferredoxin--NADP reduct 99.5 5.2E-14 1.8E-18 146.8 10.9 117 57-256 6-122 (332)
29 3dgh_A TRXR-1, thioredoxin red 99.5 2.6E-14 9E-19 157.6 6.9 154 57-257 8-162 (483)
30 4a9w_A Monooxygenase; baeyer-v 99.4 1.5E-12 5.1E-17 136.9 17.5 59 195-259 76-134 (357)
31 2zbw_A Thioredoxin reductase; 99.4 7.8E-13 2.7E-17 138.3 14.1 118 57-257 4-121 (335)
32 3jsk_A Cypbp37 protein; octame 99.4 1E-12 3.5E-17 136.1 14.4 144 57-258 78-252 (344)
33 1rp0_A ARA6, thiazole biosynth 99.4 1.2E-12 4E-17 134.0 14.6 143 57-257 38-191 (284)
34 3urh_A Dihydrolipoyl dehydroge 99.4 1.2E-13 4.1E-18 152.7 7.6 37 55-91 22-58 (491)
35 3lad_A Dihydrolipoamide dehydr 99.4 1.7E-13 5.8E-18 150.8 8.1 49 57-107 2-50 (476)
36 3dme_A Conserved exported prot 99.4 8.4E-13 2.9E-17 139.6 12.6 185 57-257 3-209 (369)
37 3da1_A Glycerol-3-phosphate de 99.4 1.2E-12 4.1E-17 146.6 13.6 64 194-257 169-232 (561)
38 3ab1_A Ferredoxin--NADP reduct 99.4 7.6E-13 2.6E-17 140.0 11.1 119 56-257 12-131 (360)
39 1ojt_A Surface protein; redox- 99.4 4E-13 1.4E-17 148.1 8.6 37 56-92 4-40 (482)
40 3itj_A Thioredoxin reductase 1 99.4 2.3E-13 7.9E-18 142.2 4.8 59 408-474 278-336 (338)
41 3dje_A Fructosyl amine: oxygen 99.4 1.2E-11 4E-16 134.5 18.2 63 194-261 160-225 (438)
42 1y56_B Sarcosine oxidase; dehy 99.4 5.1E-12 1.7E-16 134.7 14.7 184 57-257 4-205 (382)
43 3o0h_A Glutathione reductase; 99.4 7.2E-13 2.5E-17 146.1 8.3 142 57-257 25-166 (484)
44 2gmh_A Electron transfer flavo 99.3 3E-12 1E-16 144.0 12.9 170 52-258 29-218 (584)
45 2gag_B Heterotetrameric sarcos 99.3 1.6E-11 5.4E-16 131.8 16.9 189 56-257 19-230 (405)
46 3dk9_A Grase, GR, glutathione 99.3 1.8E-13 6.1E-18 150.8 1.3 36 56-91 18-53 (478)
47 3ps9_A TRNA 5-methylaminomethy 99.3 4.3E-11 1.5E-15 137.3 20.8 179 57-261 271-477 (676)
48 2a8x_A Dihydrolipoyl dehydroge 99.3 1.3E-12 4.6E-17 143.2 7.6 33 58-90 3-35 (464)
49 2rgh_A Alpha-glycerophosphate 99.3 1.5E-11 5.1E-16 138.0 16.1 65 194-258 187-251 (571)
50 3pvc_A TRNA 5-methylaminomethy 99.3 4.1E-11 1.4E-15 137.7 19.4 185 57-261 263-473 (689)
51 3cgv_A Geranylgeranyl reductas 99.3 1.1E-11 3.7E-16 132.6 13.6 155 57-257 3-162 (397)
52 3atr_A Conserved archaeal prot 99.3 2.5E-11 8.6E-16 132.6 16.5 65 195-259 100-164 (453)
53 2gjc_A Thiazole biosynthetic e 99.3 1.1E-11 3.8E-16 127.6 12.6 143 57-257 64-239 (326)
54 2qae_A Lipoamide, dihydrolipoy 99.3 7.4E-12 2.5E-16 137.4 11.7 34 58-91 2-35 (468)
55 1dxl_A Dihydrolipoamide dehydr 99.3 2.8E-12 9.6E-17 140.8 8.3 35 58-92 6-40 (470)
56 3l8k_A Dihydrolipoyl dehydroge 99.3 1E-12 3.5E-17 144.1 4.4 35 57-91 3-37 (466)
57 3r9u_A Thioredoxin reductase; 99.3 1.3E-11 4.6E-16 127.4 12.5 111 58-256 4-117 (315)
58 2qcu_A Aerobic glycerol-3-phos 99.3 8.8E-11 3E-15 129.9 19.8 64 194-258 148-211 (501)
59 1ebd_A E3BD, dihydrolipoamide 99.3 3.5E-12 1.2E-16 139.5 8.2 33 58-90 3-35 (455)
60 4dna_A Probable glutathione re 99.3 1.8E-12 6.2E-17 142.1 5.6 33 58-90 5-37 (463)
61 2hqm_A GR, grase, glutathione 99.3 8.5E-13 2.9E-17 145.3 2.7 35 57-91 10-44 (479)
62 3fbs_A Oxidoreductase; structu 99.3 1.6E-11 5.3E-16 125.7 11.6 34 58-91 2-35 (297)
63 3e1t_A Halogenase; flavoprotei 99.3 4.2E-11 1.4E-15 132.9 15.8 64 195-259 111-174 (512)
64 3axb_A Putative oxidoreductase 99.3 3.2E-11 1.1E-15 131.5 14.5 59 194-258 180-255 (448)
65 1ryi_A Glycine oxidase; flavop 99.3 1.8E-11 6.2E-16 130.3 12.1 57 194-257 163-219 (382)
66 1v59_A Dihydrolipoamide dehydr 99.3 3.3E-12 1.1E-16 140.6 6.3 36 56-91 3-38 (478)
67 3cty_A Thioredoxin reductase; 99.2 4.7E-10 1.6E-14 116.3 22.1 36 55-90 13-48 (319)
68 3nyc_A D-arginine dehydrogenas 99.2 1.5E-11 5E-16 130.8 9.5 184 56-257 7-209 (381)
69 3qvp_A Glucose oxidase; oxidor 99.2 1.6E-10 5.5E-15 129.0 17.8 53 205-258 237-294 (583)
70 3ic9_A Dihydrolipoamide dehydr 99.2 9.9E-13 3.4E-17 145.2 -0.3 35 57-91 7-41 (492)
71 2oln_A NIKD protein; flavoprot 99.2 2.4E-10 8.3E-15 122.3 17.7 56 195-257 153-208 (397)
72 3fpz_A Thiazole biosynthetic e 99.2 9.7E-11 3.3E-15 122.1 14.2 45 426-472 280-324 (326)
73 4eqs_A Coenzyme A disulfide re 99.2 1.1E-11 3.9E-16 134.5 6.9 50 206-258 68-117 (437)
74 2ywl_A Thioredoxin reductase r 99.2 7.2E-10 2.5E-14 104.8 17.9 107 59-255 2-108 (180)
75 3i3l_A Alkylhalidase CMLS; fla 99.2 1.8E-10 6E-15 129.4 14.8 61 195-257 128-188 (591)
76 2eq6_A Pyruvate dehydrogenase 99.2 5E-11 1.7E-15 130.5 9.8 34 58-91 6-39 (464)
77 3nix_A Flavoprotein/dehydrogen 99.2 2.5E-10 8.6E-15 123.1 14.7 61 195-257 106-166 (421)
78 1onf_A GR, grase, glutathione 99.1 4E-12 1.4E-16 140.6 0.3 34 58-91 2-35 (500)
79 1pj5_A N,N-dimethylglycine oxi 99.1 2.4E-10 8E-15 134.3 14.6 183 57-258 3-208 (830)
80 3q9t_A Choline dehydrogenase a 99.1 1.7E-10 6E-15 128.8 12.8 52 206-258 217-271 (577)
81 1xdi_A RV3303C-LPDA; reductase 99.1 2.4E-11 8.3E-16 134.4 5.6 34 58-91 2-38 (499)
82 2qa1_A PGAE, polyketide oxygen 99.1 9.3E-10 3.2E-14 121.5 17.7 157 56-258 9-166 (500)
83 3ics_A Coenzyme A-disulfide re 99.1 4.1E-11 1.4E-15 135.3 6.9 51 204-257 102-152 (588)
84 2uzz_A N-methyl-L-tryptophan o 99.1 4.6E-10 1.6E-14 118.9 14.7 182 58-260 2-207 (372)
85 1hyu_A AHPF, alkyl hydroperoxi 99.1 1.9E-10 6.4E-15 127.8 11.9 114 57-257 211-326 (521)
86 2gf3_A MSOX, monomeric sarcosi 99.1 3.9E-10 1.3E-14 120.2 13.2 180 58-258 3-206 (389)
87 1ges_A Glutathione reductase; 99.1 5.6E-11 1.9E-15 129.7 6.5 34 57-90 3-36 (450)
88 3kd9_A Coenzyme A disulfide re 99.1 8.6E-12 2.9E-16 136.1 -0.1 34 58-91 3-38 (449)
89 3ihg_A RDME; flavoenzyme, anth 99.1 1.2E-09 4.3E-14 121.7 17.2 166 57-257 4-183 (535)
90 2qa2_A CABE, polyketide oxygen 99.1 1.2E-09 4.1E-14 120.5 16.8 156 57-258 11-167 (499)
91 1vdc_A NTR, NADPH dependent th 99.1 4.3E-10 1.5E-14 117.2 12.4 33 57-89 7-39 (333)
92 3fmw_A Oxygenase; mithramycin, 99.1 5.2E-10 1.8E-14 125.3 13.1 157 57-257 48-207 (570)
93 3c4n_A Uncharacterized protein 99.1 1.3E-10 4.5E-15 124.9 7.8 57 194-257 171-236 (405)
94 1mo9_A ORF3; nucleotide bindin 99.1 9.8E-10 3.3E-14 122.1 14.6 36 56-91 41-76 (523)
95 2a87_A TRXR, TR, thioredoxin r 99.1 3.5E-10 1.2E-14 118.2 10.2 34 57-90 13-46 (335)
96 2cul_A Glucose-inhibited divis 99.1 1.6E-09 5.6E-14 106.9 14.5 57 195-257 68-125 (232)
97 2bry_A NEDD9 interacting prote 99.0 5.8E-10 2E-14 123.0 10.8 139 57-259 91-232 (497)
98 2r0c_A REBC; flavin adenine di 99.0 4.5E-09 1.5E-13 117.4 16.5 164 57-258 25-197 (549)
99 3fim_B ARYL-alcohol oxidase; A 99.0 7E-10 2.4E-14 123.6 9.7 52 206-258 219-277 (566)
100 1k0i_A P-hydroxybenzoate hydro 99.0 5.9E-10 2E-14 119.2 8.8 63 195-259 103-165 (394)
101 3lxd_A FAD-dependent pyridine 99.0 2.9E-10 1E-14 122.6 6.1 35 57-91 8-44 (415)
102 3c96_A Flavin-containing monoo 99.0 3.9E-09 1.3E-13 113.5 14.5 161 57-258 3-170 (410)
103 3klj_A NAD(FAD)-dependent dehy 99.0 1.5E-09 5.2E-14 115.7 11.1 34 58-91 9-42 (385)
104 2x3n_A Probable FAD-dependent 99.0 2.4E-09 8.4E-14 114.6 12.7 59 195-258 107-167 (399)
105 3oc4_A Oxidoreductase, pyridin 99.0 1.5E-10 5.1E-15 126.3 2.6 33 59-91 3-37 (452)
106 3cgb_A Pyridine nucleotide-dis 98.9 6E-10 2E-14 122.5 6.8 33 59-91 37-71 (480)
107 3ntd_A FAD-dependent pyridine 98.9 3.6E-10 1.2E-14 127.0 4.4 49 206-257 69-117 (565)
108 3t37_A Probable dehydrogenase; 98.9 1.1E-08 3.7E-13 113.8 16.3 50 207-258 223-272 (526)
109 3ka7_A Oxidoreductase; structu 98.9 2.1E-08 7.1E-13 108.1 17.6 57 195-257 196-252 (425)
110 1gpe_A Protein (glucose oxidas 98.9 2.5E-08 8.6E-13 112.0 18.7 53 205-258 241-298 (587)
111 2bc0_A NADH oxidase; flavoprot 98.9 1.4E-09 4.8E-14 119.9 8.2 34 58-91 35-71 (490)
112 1c0p_A D-amino acid oxidase; a 98.9 4.1E-09 1.4E-13 111.3 11.4 39 56-94 4-42 (363)
113 3rp8_A Flavoprotein monooxygen 98.9 1.6E-08 5.6E-13 108.5 15.2 56 195-258 127-182 (407)
114 4dgk_A Phytoene dehydrogenase; 98.9 1.7E-08 5.8E-13 111.4 15.6 57 195-256 221-277 (501)
115 1ju2_A HydroxynitrIle lyase; f 98.9 2.6E-09 9E-14 118.8 8.9 54 203-257 202-261 (536)
116 2dkh_A 3-hydroxybenzoate hydro 98.9 1.8E-08 6.2E-13 114.6 15.7 64 195-258 141-212 (639)
117 2jbv_A Choline oxidase; alcoho 98.9 1.7E-08 5.9E-13 112.4 14.9 51 207-257 221-273 (546)
118 3alj_A 2-methyl-3-hydroxypyrid 98.9 1.5E-08 5.1E-13 107.7 13.5 149 58-258 11-161 (379)
119 2weu_A Tryptophan 5-halogenase 98.9 1.4E-08 4.9E-13 112.4 13.8 59 195-259 173-232 (511)
120 3g3e_A D-amino-acid oxidase; F 98.8 7.4E-10 2.5E-14 116.5 2.9 47 60-106 2-54 (351)
121 3fg2_P Putative rubredoxin red 98.8 1.6E-09 5.3E-14 116.4 5.5 33 59-91 2-36 (404)
122 3ef6_A Toluene 1,2-dioxygenase 98.8 1.8E-09 6E-14 116.3 5.1 33 59-91 3-37 (410)
123 3pl8_A Pyranose 2-oxidase; sub 98.8 2.1E-08 7.2E-13 113.3 14.0 51 208-258 273-325 (623)
124 2gv8_A Monooxygenase; FMO, FAD 98.8 5.8E-08 2E-12 105.6 16.2 65 195-260 115-180 (447)
125 2aqj_A Tryptophan halogenase, 98.8 3.7E-08 1.3E-12 109.8 14.4 59 195-259 165-224 (538)
126 2e4g_A Tryptophan halogenase; 98.8 4.9E-08 1.7E-12 109.0 15.1 59 195-259 194-254 (550)
127 2vou_A 2,6-dihydroxypyridine h 98.8 7.1E-08 2.4E-12 103.1 15.1 146 58-258 5-154 (397)
128 3s5w_A L-ornithine 5-monooxyge 98.8 4E-08 1.4E-12 107.3 13.4 63 195-257 127-192 (463)
129 3nrn_A Uncharacterized protein 98.7 2.2E-07 7.6E-12 100.0 18.5 55 195-257 189-243 (421)
130 1kdg_A CDH, cellobiose dehydro 98.7 2.3E-08 7.8E-13 111.7 10.7 58 201-258 201-262 (546)
131 2pyx_A Tryptophan halogenase; 98.7 1.1E-07 3.6E-12 105.8 15.9 59 195-259 175-235 (526)
132 1n4w_A CHOD, cholesterol oxida 98.7 9.3E-08 3.2E-12 105.6 15.0 56 202-258 228-289 (504)
133 2xdo_A TETX2 protein; tetracyc 98.7 6.1E-08 2.1E-12 103.7 13.2 36 57-92 25-60 (398)
134 1pn0_A Phenol 2-monooxygenase; 98.7 7.9E-08 2.7E-12 109.6 14.4 35 57-91 7-46 (665)
135 2q7v_A Thioredoxin reductase; 98.7 8.5E-08 2.9E-12 99.4 13.0 34 57-90 7-40 (325)
136 2x8g_A Thioredoxin glutathione 98.7 1.3E-07 4.4E-12 106.8 15.5 51 56-106 105-155 (598)
137 2xve_A Flavin-containing monoo 98.7 2.4E-07 8.2E-12 101.2 16.5 66 194-260 100-169 (464)
138 1fl2_A Alkyl hydroperoxide red 98.7 5.3E-07 1.8E-11 92.6 18.2 47 208-254 193-239 (310)
139 3p1w_A Rabgdi protein; GDI RAB 98.7 1.3E-07 4.5E-12 102.5 13.4 57 195-256 256-313 (475)
140 2q0l_A TRXR, thioredoxin reduc 98.7 1.7E-07 5.9E-12 96.3 13.8 56 195-257 59-114 (311)
141 2q0l_A TRXR, thioredoxin reduc 98.7 9.5E-07 3.2E-11 90.7 19.2 48 207-254 191-238 (311)
142 2wpf_A Trypanothione reductase 98.6 7.1E-08 2.4E-12 106.3 10.9 33 57-89 6-39 (495)
143 1coy_A Cholesterol oxidase; ox 98.6 2.6E-07 9E-12 102.0 15.3 56 202-258 233-294 (507)
144 1yvv_A Amine oxidase, flavin-c 98.6 9.4E-08 3.2E-12 99.4 11.1 38 58-95 2-39 (336)
145 1fec_A Trypanothione reductase 98.6 5.5E-08 1.9E-12 107.1 9.5 32 58-89 3-35 (490)
146 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1.1E-07 3.9E-12 99.3 11.1 37 59-95 2-41 (342)
147 3d1c_A Flavin-containing putat 98.6 1.9E-07 6.5E-12 98.4 12.4 58 194-258 87-144 (369)
148 4ap3_A Steroid monooxygenase; 98.6 1.3E-07 4.5E-12 105.3 11.1 61 194-259 98-161 (549)
149 1zmd_A Dihydrolipoyl dehydroge 98.6 1.8E-06 6.3E-11 94.4 19.9 32 59-90 179-210 (474)
150 1fl2_A Alkyl hydroperoxide red 98.6 1.3E-07 4.5E-12 97.1 9.9 58 195-257 56-115 (310)
151 1zmd_A Dihydrolipoyl dehydroge 98.6 1.4E-07 4.7E-12 103.4 10.6 35 57-91 5-39 (474)
152 2r9z_A Glutathione amide reduc 98.6 1.1E-07 3.8E-12 103.8 9.8 34 57-90 3-36 (463)
153 3gwf_A Cyclohexanone monooxyge 98.6 2.2E-07 7.5E-12 103.3 11.8 61 194-259 86-149 (540)
154 1lvl_A Dihydrolipoamide dehydr 98.5 1.3E-07 4.4E-12 103.2 8.8 34 57-90 4-37 (458)
155 2r9z_A Glutathione amide reduc 98.5 3.4E-06 1.1E-10 92.0 20.0 32 59-90 167-198 (463)
156 2q7v_A Thioredoxin reductase; 98.5 3.2E-06 1.1E-10 87.4 18.4 46 208-254 201-246 (325)
157 2wpf_A Trypanothione reductase 98.5 2.2E-06 7.5E-11 94.3 17.8 52 198-254 238-289 (495)
158 1fec_A Trypanothione reductase 98.5 2.7E-06 9.2E-11 93.5 18.4 53 197-254 233-285 (490)
159 1trb_A Thioredoxin reductase; 98.5 3.4E-07 1.1E-11 94.5 10.5 34 57-90 4-37 (320)
160 3k7m_X 6-hydroxy-L-nicotine ox 98.5 9.6E-07 3.3E-11 95.2 14.5 39 59-97 2-40 (431)
161 1w4x_A Phenylacetone monooxyge 98.5 7.4E-07 2.5E-11 99.3 12.9 37 57-93 15-51 (542)
162 1zk7_A HGII, reductase, mercur 98.5 7.8E-07 2.7E-11 97.2 12.7 35 57-91 3-37 (467)
163 3kkj_A Amine oxidase, flavin-c 98.5 9.6E-08 3.3E-12 95.1 4.9 38 58-95 2-39 (336)
164 3vrd_B FCCB subunit, flavocyto 98.4 2.8E-06 9.6E-11 90.7 15.9 32 60-91 4-37 (401)
165 1y56_A Hypothetical protein PH 98.4 3.7E-07 1.3E-11 100.4 8.9 38 55-93 105-142 (493)
166 3uox_A Otemo; baeyer-villiger 98.4 1.1E-06 3.7E-11 97.8 12.6 60 194-258 86-148 (545)
167 1d5t_A Guanine nucleotide diss 98.4 2.4E-06 8.4E-11 92.3 15.1 57 195-257 234-290 (433)
168 2yqu_A 2-oxoglutarate dehydrog 98.4 1.7E-07 5.7E-12 102.2 5.7 34 58-91 1-34 (455)
169 2vdc_G Glutamate synthase [NAD 98.4 1.6E-06 5.4E-11 94.2 12.0 32 59-90 265-297 (456)
170 2x8g_A Thioredoxin glutathione 98.4 1.7E-05 5.7E-10 89.4 20.6 31 60-90 288-318 (598)
171 3nks_A Protoporphyrinogen oxid 98.3 4.1E-06 1.4E-10 91.5 14.9 57 195-257 234-290 (477)
172 4hb9_A Similarities with proba 98.3 4.3E-06 1.5E-10 89.1 13.9 34 59-92 2-35 (412)
173 1gte_A Dihydropyrimidine dehyd 98.3 7.2E-06 2.5E-10 98.0 16.8 31 60-90 334-365 (1025)
174 1nhp_A NADH peroxidase; oxidor 98.3 9.9E-07 3.4E-11 95.8 7.7 33 59-91 1-35 (447)
175 2gag_A Heterotetrameric sarcos 98.3 2.6E-06 8.7E-11 101.2 11.8 37 56-92 126-162 (965)
176 3iwa_A FAD-dependent pyridine 98.3 1.6E-06 5.5E-11 94.8 9.2 33 59-91 4-38 (472)
177 4b63_A L-ornithine N5 monooxyg 98.2 1.8E-05 6.2E-10 87.1 17.0 63 194-256 144-213 (501)
178 2cdu_A NADPH oxidase; flavoenz 98.2 1.8E-06 6.1E-11 93.9 8.5 33 59-91 1-35 (452)
179 4gut_A Lysine-specific histone 98.2 1.8E-05 6.1E-10 91.3 17.1 40 56-95 334-373 (776)
180 1zk7_A HGII, reductase, mercur 98.2 3.8E-05 1.3E-09 83.7 18.2 32 59-90 177-208 (467)
181 1q1r_A Putidaredoxin reductase 98.2 1.6E-06 5.4E-11 93.7 6.7 34 58-91 4-39 (431)
182 3k30_A Histamine dehydrogenase 98.1 4.8E-05 1.6E-09 87.2 18.5 40 55-94 388-427 (690)
183 3h8l_A NADH oxidase; membrane 98.1 1.5E-06 5.1E-11 93.1 5.7 33 59-91 2-37 (409)
184 1xhc_A NADH oxidase /nitrite r 98.1 2.5E-06 8.5E-11 90.1 6.5 33 58-91 8-40 (367)
185 4gde_A UDP-galactopyranose mut 98.1 1.9E-06 6.5E-11 95.0 4.9 52 195-254 222-273 (513)
186 2v3a_A Rubredoxin reductase; a 98.1 3.5E-06 1.2E-10 89.5 6.4 33 58-90 4-38 (384)
187 2bcg_G Secretory pathway GDP d 98.0 3.9E-06 1.4E-10 91.2 5.3 57 195-257 242-300 (453)
188 1cjc_A Protein (adrenodoxin re 98.0 5.2E-05 1.8E-09 82.4 13.9 49 408-473 346-395 (460)
189 2gqw_A Ferredoxin reductase; f 97.9 1.3E-05 4.5E-10 85.8 8.1 35 57-91 6-42 (408)
190 1trb_A Thioredoxin reductase; 97.9 5.8E-05 2E-09 77.5 12.2 55 200-254 189-244 (320)
191 3sx6_A Sulfide-quinone reducta 97.9 1.2E-05 4.2E-10 86.8 6.9 33 59-91 5-40 (437)
192 3fg2_P Putative rubredoxin red 97.8 0.00012 4.1E-09 78.1 13.2 54 196-254 185-238 (404)
193 3lxd_A FAD-dependent pyridine 97.8 0.00014 4.7E-09 77.9 13.3 54 196-254 195-248 (415)
194 1v59_A Dihydrolipoamide dehydr 97.8 0.0002 6.8E-09 78.2 14.6 101 59-255 184-285 (478)
195 3h28_A Sulfide-quinone reducta 97.8 5E-06 1.7E-10 89.7 1.7 33 59-91 3-37 (430)
196 1v0j_A UDP-galactopyranose mut 97.8 1.2E-05 4.2E-10 85.7 4.5 41 57-97 6-47 (399)
197 2eq6_A Pyruvate dehydrogenase 97.7 0.00025 8.5E-09 77.1 14.5 99 59-254 170-268 (464)
198 3cty_A Thioredoxin reductase; 97.7 0.00015 5.2E-09 74.4 12.1 50 205-254 200-249 (319)
199 3hdq_A UDP-galactopyranose mut 97.7 1.9E-05 6.7E-10 83.7 5.1 41 56-96 27-67 (397)
200 1s3e_A Amine oxidase [flavin-c 97.7 2.1E-05 7.3E-10 86.9 5.4 40 57-96 3-42 (520)
201 2jae_A L-amino acid oxidase; o 97.7 2.3E-05 8E-10 85.8 5.6 41 57-97 10-50 (489)
202 2yg5_A Putrescine oxidase; oxi 97.7 2.4E-05 8.3E-10 84.7 5.4 40 57-96 4-43 (453)
203 3itj_A Thioredoxin reductase 1 97.7 0.00027 9.3E-09 72.8 12.7 49 208-256 222-270 (338)
204 2b9w_A Putative aminooxidase; 97.7 3.1E-05 1.1E-09 83.1 5.6 40 57-96 5-45 (424)
205 1i8t_A UDP-galactopyranose mut 97.7 2.4E-05 8.2E-10 82.5 4.4 38 59-96 2-39 (367)
206 1rsg_A FMS1 protein; FAD bindi 97.7 2.8E-05 9.7E-10 85.9 5.1 40 57-96 7-47 (516)
207 1ebd_A E3BD, dihydrolipoamide 97.6 0.00057 2E-08 74.0 15.2 98 59-255 171-268 (455)
208 3ab1_A Ferredoxin--NADP reduct 97.6 0.00023 7.8E-09 74.5 11.7 51 203-254 210-260 (360)
209 1nhp_A NADH peroxidase; oxidor 97.6 0.0002 6.7E-09 77.6 11.4 34 58-91 149-182 (447)
210 3i6d_A Protoporphyrinogen oxid 97.6 2E-05 6.7E-10 85.7 3.4 38 58-95 5-48 (470)
211 2e1m_A L-glutamate oxidase; L- 97.6 3.9E-05 1.3E-09 80.7 5.5 39 57-95 43-82 (376)
212 3urh_A Dihydrolipoyl dehydroge 97.6 0.00042 1.4E-08 75.9 13.8 57 197-254 241-297 (491)
213 3ihm_A Styrene monooxygenase A 97.6 3E-05 1E-09 83.6 4.5 34 58-91 22-55 (430)
214 2v3a_A Rubredoxin reductase; a 97.6 0.00051 1.7E-08 72.6 13.7 96 59-255 146-241 (384)
215 2ivd_A PPO, PPOX, protoporphyr 97.6 3.7E-05 1.3E-09 83.9 5.0 39 57-95 15-53 (478)
216 1q1r_A Putidaredoxin reductase 97.6 0.00029 1E-08 75.8 11.8 53 197-254 193-247 (431)
217 2zbw_A Thioredoxin reductase; 97.6 0.00057 1.9E-08 70.5 13.3 53 201-254 197-249 (335)
218 3dgz_A Thioredoxin reductase 2 97.6 0.00064 2.2E-08 74.4 14.3 57 198-254 228-284 (488)
219 2vvm_A Monoamine oxidase N; FA 97.6 6.7E-05 2.3E-09 82.3 6.3 56 195-256 255-311 (495)
220 2yqu_A 2-oxoglutarate dehydrog 97.6 0.00042 1.5E-08 75.1 12.6 32 59-90 168-199 (455)
221 3hyw_A Sulfide-quinone reducta 97.5 2.4E-05 8.4E-10 84.3 2.5 31 60-90 4-36 (430)
222 1ges_A Glutathione reductase; 97.5 0.00033 1.1E-08 75.8 11.4 32 59-90 168-199 (450)
223 3dgh_A TRXR-1, thioredoxin red 97.5 0.00068 2.3E-08 74.1 13.9 57 198-254 230-286 (483)
224 2cdu_A NADPH oxidase; flavoenz 97.5 0.00066 2.3E-08 73.5 13.7 53 197-255 193-245 (452)
225 1sez_A Protoporphyrinogen oxid 97.5 5.5E-05 1.9E-09 83.2 4.9 40 57-96 12-51 (504)
226 3g5s_A Methylenetetrahydrofola 97.5 7E-05 2.4E-09 78.0 5.3 34 59-92 2-35 (443)
227 1mo9_A ORF3; nucleotide bindin 97.5 0.00062 2.1E-08 75.2 13.3 99 59-255 215-314 (523)
228 3lov_A Protoporphyrinogen oxid 97.5 6.1E-05 2.1E-09 82.1 4.5 38 58-95 4-43 (475)
229 4dsg_A UDP-galactopyranose mut 97.5 0.00015 5E-09 79.4 7.3 41 57-97 8-49 (484)
230 1dxl_A Dihydrolipoamide dehydr 97.4 0.00049 1.7E-08 74.9 11.1 32 59-90 178-209 (470)
231 3c4a_A Probable tryptophan hyd 97.4 6.8E-05 2.3E-09 79.3 4.0 34 60-93 2-37 (381)
232 3cgb_A Pyridine nucleotide-dis 97.4 0.00056 1.9E-08 74.6 11.3 33 58-90 186-218 (480)
233 2bi7_A UDP-galactopyranose mut 97.4 9.3E-05 3.2E-09 78.4 4.9 39 58-96 3-41 (384)
234 3s5w_A L-ornithine 5-monooxyge 97.4 0.0018 6.3E-08 70.0 15.3 46 208-254 329-374 (463)
235 2hqm_A GR, grase, glutathione 97.4 0.00066 2.3E-08 74.1 11.7 32 59-90 186-217 (479)
236 3oc4_A Oxidoreductase, pyridin 97.4 0.00093 3.2E-08 72.3 12.7 53 196-255 190-242 (452)
237 3ic9_A Dihydrolipoamide dehydr 97.4 0.00097 3.3E-08 73.0 12.9 33 59-91 175-207 (492)
238 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.00085 2.9E-08 74.0 12.5 47 208-254 404-450 (521)
239 1lvl_A Dihydrolipoamide dehydr 97.4 0.0004 1.4E-08 75.3 9.5 32 59-90 172-203 (458)
240 3r9u_A Thioredoxin reductase; 97.4 0.0013 4.5E-08 66.8 12.7 48 206-254 194-241 (315)
241 1vdc_A NTR, NADPH dependent th 97.3 0.0013 4.3E-08 67.8 12.5 49 206-254 206-256 (333)
242 2gqw_A Ferredoxin reductase; f 97.3 0.0013 4.4E-08 70.1 12.9 32 59-90 146-177 (408)
243 2qae_A Lipoamide, dihydrolipoy 97.3 0.0013 4.4E-08 71.5 13.1 55 198-254 218-273 (468)
244 2iid_A L-amino-acid oxidase; f 97.3 0.00013 4.6E-09 80.0 5.0 40 57-96 32-71 (498)
245 2a8x_A Dihydrolipoyl dehydroge 97.3 0.0014 4.7E-08 71.2 13.0 32 59-90 172-203 (464)
246 2vdc_G Glutamate synthase [NAD 97.3 0.00013 4.6E-09 79.0 4.8 36 57-92 121-156 (456)
247 3lad_A Dihydrolipoamide dehydr 97.3 0.0015 5.2E-08 71.1 13.3 55 197-254 223-277 (476)
248 2bc0_A NADH oxidase; flavoprot 97.3 0.00092 3.2E-08 73.1 11.5 32 59-90 195-226 (490)
249 3dk9_A Grase, GR, glutathione 97.3 0.0015 5.1E-08 71.2 13.1 32 59-90 188-219 (478)
250 1onf_A GR, grase, glutathione 97.3 0.001 3.5E-08 73.0 11.8 32 59-90 177-208 (500)
251 3ef6_A Toluene 1,2-dioxygenase 97.3 0.00039 1.3E-08 74.2 8.1 52 197-254 187-238 (410)
252 3iwa_A FAD-dependent pyridine 97.3 0.0011 3.7E-08 72.2 11.6 53 196-254 203-255 (472)
253 3f8d_A Thioredoxin reductase ( 97.2 0.0022 7.4E-08 65.4 12.7 47 207-254 202-248 (323)
254 3qfa_A Thioredoxin reductase 1 97.2 0.0035 1.2E-07 69.0 14.8 31 60-90 212-242 (519)
255 3ntd_A FAD-dependent pyridine 97.2 0.0023 7.7E-08 71.3 13.4 31 60-90 153-183 (565)
256 4dna_A Probable glutathione re 97.2 0.0013 4.5E-08 71.4 11.0 54 197-255 213-266 (463)
257 3o0h_A Glutathione reductase; 97.2 0.0016 5.6E-08 71.0 11.6 52 197-254 234-285 (484)
258 1b37_A Protein (polyamine oxid 97.2 0.00027 9.4E-09 76.9 5.2 38 58-95 4-42 (472)
259 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00039 1.3E-08 79.2 5.8 37 56-92 371-407 (671)
260 1o94_A Tmadh, trimethylamine d 97.1 0.00036 1.2E-08 80.3 5.5 37 56-92 387-423 (729)
261 3lzw_A Ferredoxin--NADP reduct 97.1 0.0022 7.6E-08 65.6 10.9 49 205-254 199-247 (332)
262 1ojt_A Surface protein; redox- 97.0 0.0021 7.2E-08 70.1 10.9 32 59-90 186-217 (482)
263 1xdi_A RV3303C-LPDA; reductase 97.0 0.0031 1.1E-07 69.1 12.2 32 59-90 183-214 (499)
264 1xhc_A NADH oxidase /nitrite r 97.0 0.002 6.7E-08 67.7 9.9 32 59-90 144-175 (367)
265 2z3y_A Lysine-specific histone 96.9 0.00059 2E-08 77.6 5.2 40 56-95 105-144 (662)
266 1m6i_A Programmed cell death p 96.9 0.0047 1.6E-07 67.5 12.3 51 198-254 229-279 (493)
267 3ics_A Coenzyme A-disulfide re 96.9 0.0032 1.1E-07 70.4 11.1 32 59-90 188-219 (588)
268 2a87_A TRXR, TR, thioredoxin r 96.9 0.0025 8.7E-08 65.7 9.6 48 206-254 202-249 (335)
269 4a5l_A Thioredoxin reductase; 96.9 0.0041 1.4E-07 63.2 10.6 47 208-254 201-247 (314)
270 1lqt_A FPRA; NADP+ derivative, 96.9 0.00058 2E-08 74.0 4.4 34 58-91 3-43 (456)
271 1gte_A Dihydropyrimidine dehyd 96.9 0.00078 2.7E-08 80.4 5.8 54 203-256 378-441 (1025)
272 2xag_A Lysine-specific histone 96.8 0.0008 2.7E-08 78.1 5.5 39 57-95 277-315 (852)
273 1m6i_A Programmed cell death p 96.8 0.00066 2.3E-08 74.4 4.5 36 56-91 9-46 (493)
274 4b1b_A TRXR, thioredoxin reduc 96.7 0.011 3.9E-07 65.1 13.4 53 196-254 264-316 (542)
275 3kd9_A Coenzyme A disulfide re 96.7 0.0064 2.2E-07 65.5 10.9 31 60-90 150-180 (449)
276 1cjc_A Protein (adrenodoxin re 96.6 0.0011 3.9E-08 71.7 4.4 34 58-91 6-41 (460)
277 4eqs_A Coenzyme A disulfide re 96.6 0.0072 2.5E-07 65.0 10.4 32 60-91 149-180 (437)
278 3l8k_A Dihydrolipoyl dehydroge 96.5 0.011 3.7E-07 64.1 11.4 32 59-90 173-204 (466)
279 1vg0_A RAB proteins geranylger 96.4 0.0025 8.6E-08 71.2 5.5 55 195-254 378-434 (650)
280 2gag_A Heterotetrameric sarcos 96.4 0.0044 1.5E-07 73.4 7.8 52 205-256 326-382 (965)
281 4g6h_A Rotenone-insensitive NA 96.2 0.017 5.9E-07 63.1 11.1 55 196-254 273-329 (502)
282 3klj_A NAD(FAD)-dependent dehy 96.2 0.0021 7.3E-08 67.9 3.6 33 59-91 147-179 (385)
283 3d1c_A Flavin-containing putat 96.1 0.019 6.5E-07 59.7 10.2 31 60-90 168-198 (369)
284 4gcm_A TRXR, thioredoxin reduc 95.9 0.069 2.4E-06 54.0 13.2 31 60-90 147-177 (312)
285 3ayj_A Pro-enzyme of L-phenyla 95.9 0.0028 9.7E-08 71.7 2.7 34 58-91 56-97 (721)
286 4g6h_A Rotenone-insensitive NA 95.9 0.0045 1.5E-07 67.8 4.2 33 58-90 42-74 (502)
287 3fbs_A Oxidoreductase; structu 95.1 0.049 1.7E-06 54.4 8.3 31 59-90 142-172 (297)
288 1lqt_A FPRA; NADP+ derivative, 95.0 0.057 1.9E-06 58.2 9.2 57 197-254 248-323 (456)
289 1o94_A Tmadh, trimethylamine d 94.7 0.041 1.4E-06 63.1 7.3 32 59-90 529-562 (729)
290 3uox_A Otemo; baeyer-villiger 94.6 0.11 3.9E-06 57.2 10.2 33 59-91 186-218 (545)
291 1ps9_A 2,4-dienoyl-COA reducta 94.5 0.092 3.1E-06 59.6 9.5 49 201-256 579-627 (671)
292 3gwf_A Cyclohexanone monooxyge 94.3 0.39 1.3E-05 52.8 13.9 33 59-91 179-211 (540)
293 4fk1_A Putative thioredoxin re 92.7 0.082 2.8E-06 53.3 4.5 48 408-472 252-299 (304)
294 3sx6_A Sulfide-quinone reducta 92.1 0.19 6.6E-06 53.6 6.8 54 196-258 60-113 (437)
295 2lfc_A Fumarate reductase, fla 91.9 0.056 1.9E-06 49.2 1.8 29 300-328 6-37 (160)
296 2g1u_A Hypothetical protein TM 91.3 0.19 6.4E-06 45.2 4.8 33 59-91 20-52 (155)
297 2bcg_G Secretory pathway GDP d 91.1 0.28 9.7E-06 52.6 6.7 42 55-96 8-49 (453)
298 3fwz_A Inner membrane protein 91.0 0.27 9.3E-06 43.3 5.4 32 59-90 8-39 (140)
299 2cul_A Glucose-inhibited divis 91.0 0.16 5.6E-06 49.0 4.3 33 58-90 3-35 (232)
300 3h8l_A NADH oxidase; membrane 90.8 0.29 1E-05 51.6 6.4 52 201-257 62-113 (409)
301 3llv_A Exopolyphosphatase-rela 90.6 0.26 9E-06 43.2 4.9 31 60-90 8-38 (141)
302 3h28_A Sulfide-quinone reducta 90.5 0.28 9.7E-06 52.1 6.0 49 427-475 284-335 (430)
303 1lss_A TRK system potassium up 89.6 0.33 1.1E-05 42.2 4.7 32 59-90 5-36 (140)
304 3ic5_A Putative saccharopine d 89.1 0.33 1.1E-05 40.7 4.2 32 59-90 6-38 (118)
305 3dfz_A SIRC, precorrin-2 dehyd 88.9 0.3 1E-05 46.9 4.1 33 58-90 31-63 (223)
306 1kyq_A Met8P, siroheme biosynt 88.6 0.27 9.3E-06 48.7 3.7 32 59-90 14-45 (274)
307 1id1_A Putative potassium chan 88.3 0.52 1.8E-05 42.0 5.2 32 59-90 4-35 (153)
308 3hyw_A Sulfide-quinone reducta 88.3 0.46 1.6E-05 50.5 5.5 43 205-256 66-108 (430)
309 2hmt_A YUAA protein; RCK, KTN, 88.2 0.41 1.4E-05 41.7 4.4 31 60-90 8-38 (144)
310 3kkj_A Amine oxidase, flavin-c 87.4 0.38 1.3E-05 46.4 3.9 38 427-474 292-329 (336)
311 3c85_A Putative glutathione-re 86.8 0.52 1.8E-05 43.4 4.3 32 59-90 40-72 (183)
312 2x5o_A UDP-N-acetylmuramoylala 86.1 0.45 1.5E-05 50.8 4.0 33 60-92 7-39 (439)
313 4dio_A NAD(P) transhydrogenase 86.1 0.56 1.9E-05 49.1 4.5 33 58-90 190-222 (405)
314 1pjc_A Protein (L-alanine dehy 85.3 0.7 2.4E-05 47.9 4.8 32 59-90 168-199 (361)
315 3l4b_C TRKA K+ channel protien 84.4 0.84 2.9E-05 43.4 4.6 31 60-90 2-32 (218)
316 1vg0_A RAB proteins geranylger 84.2 1.6 5.6E-05 48.6 7.4 41 56-96 6-46 (650)
317 3p2y_A Alanine dehydrogenase/p 84.0 0.65 2.2E-05 48.2 3.8 33 58-90 184-216 (381)
318 3lk7_A UDP-N-acetylmuramoylala 83.5 0.68 2.3E-05 49.6 3.8 32 59-90 10-41 (451)
319 1x13_A NAD(P) transhydrogenase 83.1 0.85 2.9E-05 48.0 4.3 32 59-90 173-204 (401)
320 4ffl_A PYLC; amino acid, biosy 83.0 1 3.5E-05 46.5 4.9 32 60-91 3-34 (363)
321 1jw9_B Molybdopterin biosynthe 83.0 0.79 2.7E-05 44.7 3.8 35 58-92 31-66 (249)
322 3g5s_A Methylenetetrahydrofola 82.9 1.2 4.3E-05 46.4 5.3 40 426-475 325-364 (443)
323 3ado_A Lambda-crystallin; L-gu 82.8 0.99 3.4E-05 45.8 4.5 32 59-90 7-38 (319)
324 2xve_A Flavin-containing monoo 82.7 0.85 2.9E-05 49.0 4.3 32 59-90 198-229 (464)
325 1l7d_A Nicotinamide nucleotide 82.3 1 3.4E-05 47.1 4.5 33 58-90 172-204 (384)
326 1nyt_A Shikimate 5-dehydrogena 81.8 1.1 3.7E-05 44.3 4.3 32 59-90 120-151 (271)
327 2gv8_A Monooxygenase; FMO, FAD 81.8 0.89 3E-05 48.5 4.0 32 59-90 213-245 (447)
328 2eez_A Alanine dehydrogenase; 81.7 1.2 4E-05 46.3 4.8 32 59-90 167-198 (369)
329 2a9f_A Putative malic enzyme ( 81.5 1 3.5E-05 46.7 4.1 34 57-90 187-221 (398)
330 1y56_A Hypothetical protein PH 80.8 1 3.4E-05 48.8 4.0 62 193-258 159-220 (493)
331 1f0y_A HCDH, L-3-hydroxyacyl-C 80.6 1.3 4.5E-05 44.4 4.5 31 60-90 17-47 (302)
332 2vhw_A Alanine dehydrogenase; 80.3 1.4 4.7E-05 45.9 4.7 32 59-90 169-200 (377)
333 3oj0_A Glutr, glutamyl-tRNA re 80.1 0.81 2.8E-05 40.3 2.4 32 59-90 22-53 (144)
334 3phh_A Shikimate dehydrogenase 80.0 1.4 4.7E-05 43.5 4.3 33 58-90 118-150 (269)
335 3i83_A 2-dehydropantoate 2-red 79.6 1.4 4.9E-05 44.6 4.5 32 59-90 3-34 (320)
336 3tnl_A Shikimate dehydrogenase 79.4 1.6 5.6E-05 44.1 4.8 32 59-90 155-187 (315)
337 2vvm_A Monoamine oxidase N; FA 79.3 2.5 8.4E-05 45.5 6.5 39 58-96 39-77 (495)
338 4e12_A Diketoreductase; oxidor 79.3 1.5 5E-05 43.7 4.3 31 60-90 6-36 (283)
339 1pjq_A CYSG, siroheme synthase 79.1 1.4 4.9E-05 47.1 4.4 32 59-90 13-44 (457)
340 4dgk_A Phytoene dehydrogenase; 79.1 1 3.5E-05 48.6 3.3 38 59-96 2-39 (501)
341 3eag_A UDP-N-acetylmuramate:L- 78.4 1.6 5.4E-05 44.5 4.3 31 60-90 6-37 (326)
342 4ap3_A Steroid monooxygenase; 78.3 1.3 4.6E-05 48.6 4.0 33 59-91 192-224 (549)
343 1p77_A Shikimate 5-dehydrogena 78.0 1.4 4.9E-05 43.5 3.7 32 59-90 120-151 (272)
344 1vl6_A Malate oxidoreductase; 77.8 1.6 5.4E-05 45.2 4.1 34 57-90 191-225 (388)
345 3rui_A Ubiquitin-like modifier 77.8 2.2 7.6E-05 43.5 5.1 37 57-93 33-70 (340)
346 3jyo_A Quinate/shikimate dehyd 77.3 1.9 6.3E-05 43.0 4.3 32 59-90 128-160 (283)
347 3ghy_A Ketopantoate reductase 77.1 1.9 6.5E-05 44.0 4.5 32 59-90 4-35 (335)
348 3hn2_A 2-dehydropantoate 2-red 76.9 1.6 5.3E-05 44.1 3.8 32 59-90 3-34 (312)
349 3t4e_A Quinate/shikimate dehyd 76.6 2.2 7.6E-05 43.0 4.8 32 59-90 149-181 (312)
350 2egg_A AROE, shikimate 5-dehyd 76.5 1.8 6.1E-05 43.4 4.1 32 59-90 142-174 (297)
351 3ond_A Adenosylhomocysteinase; 76.3 1.9 6.5E-05 46.2 4.3 32 59-90 266-297 (488)
352 3u62_A Shikimate dehydrogenase 76.2 2.5 8.6E-05 41.2 4.9 31 60-90 110-141 (253)
353 3don_A Shikimate dehydrogenase 75.6 1.8 6.2E-05 42.9 3.7 33 58-90 117-150 (277)
354 1pzg_A LDH, lactate dehydrogen 75.5 2.2 7.5E-05 43.5 4.4 32 59-90 10-42 (331)
355 3l9w_A Glutathione-regulated p 75.4 2.5 8.6E-05 44.5 5.0 32 59-90 5-36 (413)
356 3g17_A Similar to 2-dehydropan 75.4 1.8 6.3E-05 43.2 3.8 32 59-90 3-34 (294)
357 1ks9_A KPA reductase;, 2-dehyd 75.1 2.3 8E-05 42.0 4.5 32 60-91 2-33 (291)
358 1lld_A L-lactate dehydrogenase 74.8 2.3 7.7E-05 43.0 4.3 32 59-90 8-41 (319)
359 3h8v_A Ubiquitin-like modifier 74.8 2.3 7.8E-05 42.5 4.2 37 57-93 35-72 (292)
360 3fbt_A Chorismate mutase and s 74.7 2 7E-05 42.6 3.8 33 58-90 122-155 (282)
361 3pwz_A Shikimate dehydrogenase 74.7 2.4 8.1E-05 41.9 4.3 33 58-90 120-153 (272)
362 1lu9_A Methylene tetrahydromet 74.6 2.6 8.9E-05 41.9 4.6 32 59-90 120-152 (287)
363 2dpo_A L-gulonate 3-dehydrogen 74.0 2.6 9E-05 42.7 4.5 31 60-90 8-38 (319)
364 3o8q_A Shikimate 5-dehydrogena 73.8 2.7 9.3E-05 41.7 4.5 32 59-90 127-159 (281)
365 2raf_A Putative dinucleotide-b 73.7 2.7 9.3E-05 39.6 4.3 32 59-90 20-51 (209)
366 2ew2_A 2-dehydropantoate 2-red 73.4 2.5 8.6E-05 42.2 4.3 31 60-90 5-35 (316)
367 2y0c_A BCEC, UDP-glucose dehyd 73.4 2.5 8.4E-05 45.5 4.3 32 59-90 9-40 (478)
368 1nvt_A Shikimate 5'-dehydrogen 72.7 2.2 7.4E-05 42.5 3.5 31 59-90 129-159 (287)
369 3d4o_A Dipicolinate synthase s 72.5 3.2 0.00011 41.4 4.7 32 59-90 156-187 (293)
370 2rir_A Dipicolinate synthase, 72.4 3.2 0.00011 41.5 4.7 32 59-90 158-189 (300)
371 1bg6_A N-(1-D-carboxylethyl)-L 72.2 2.8 9.4E-05 42.9 4.3 32 59-90 5-36 (359)
372 3vtf_A UDP-glucose 6-dehydroge 71.9 3 0.0001 44.2 4.5 33 58-90 21-53 (444)
373 2dvm_A Malic enzyme, 439AA lon 71.9 3.6 0.00012 43.5 5.1 31 58-88 186-219 (439)
374 2v6b_A L-LDH, L-lactate dehydr 71.6 3.1 0.0001 41.8 4.3 31 60-90 2-34 (304)
375 4a9w_A Monooxygenase; baeyer-v 71.5 2.4 8.1E-05 42.9 3.6 31 59-90 164-194 (357)
376 3hwr_A 2-dehydropantoate 2-red 71.5 3.2 0.00011 41.9 4.5 31 59-90 20-50 (318)
377 1zud_1 Adenylyltransferase THI 71.2 2.5 8.5E-05 41.2 3.5 34 58-91 28-62 (251)
378 4g65_A TRK system potassium up 70.9 2.2 7.5E-05 45.7 3.2 31 60-90 5-35 (461)
379 3gg2_A Sugar dehydrogenase, UD 70.7 3.1 0.00011 44.4 4.3 31 60-90 4-34 (450)
380 2qrj_A Saccharopine dehydrogen 70.6 3.4 0.00012 42.9 4.4 33 58-90 214-250 (394)
381 3vh1_A Ubiquitin-like modifier 70.6 3.7 0.00013 45.0 4.9 37 58-94 327-364 (598)
382 2o7s_A DHQ-SDH PR, bifunctiona 70.4 2.6 8.8E-05 46.0 3.7 32 59-90 365-396 (523)
383 4gsl_A Ubiquitin-like modifier 70.1 3.9 0.00013 44.9 4.9 37 57-93 325-362 (615)
384 1zcj_A Peroxisomal bifunctiona 70.0 3.1 0.0001 44.6 4.1 31 60-90 39-69 (463)
385 1npy_A Hypothetical shikimate 69.8 2.9 9.8E-05 41.3 3.6 32 59-90 120-152 (271)
386 3h5n_A MCCB protein; ubiquitin 69.8 3.3 0.00011 42.6 4.1 35 58-92 118-153 (353)
387 2ewd_A Lactate dehydrogenase,; 69.7 3.3 0.00011 41.8 4.1 32 59-90 5-37 (317)
388 3qha_A Putative oxidoreductase 69.6 2.7 9.1E-05 42.0 3.4 34 58-91 15-48 (296)
389 2vns_A Metalloreductase steap3 69.5 4.7 0.00016 38.0 5.0 32 59-90 29-60 (215)
390 3k6j_A Protein F01G10.3, confi 69.5 3.5 0.00012 44.0 4.3 31 60-90 56-86 (460)
391 1pqw_A Polyketide synthase; ro 69.2 3 0.0001 38.6 3.4 31 60-90 41-72 (198)
392 3ego_A Probable 2-dehydropanto 69.0 3.5 0.00012 41.4 4.1 31 59-90 3-33 (307)
393 2hjr_A Malate dehydrogenase; m 69.0 3.7 0.00013 41.7 4.3 32 59-90 15-47 (328)
394 4a7p_A UDP-glucose dehydrogena 68.9 3.8 0.00013 43.6 4.5 34 58-91 8-41 (446)
395 2hk9_A Shikimate dehydrogenase 68.8 3.3 0.00011 40.9 3.8 32 59-90 130-161 (275)
396 1jay_A Coenzyme F420H2:NADP+ o 68.5 4.4 0.00015 37.9 4.5 31 60-90 2-33 (212)
397 1rp0_A ARA6, thiazole biosynth 68.5 1.7 5.9E-05 43.0 1.7 46 427-474 231-276 (284)
398 3q2o_A Phosphoribosylaminoimid 68.4 4.2 0.00014 42.2 4.8 32 59-90 15-46 (389)
399 3orq_A N5-carboxyaminoimidazol 68.3 4.3 0.00015 42.0 4.8 33 59-91 13-45 (377)
400 3ce6_A Adenosylhomocysteinase; 67.8 3.8 0.00013 44.1 4.3 32 59-90 275-306 (494)
401 3o38_A Short chain dehydrogena 67.8 3.5 0.00012 40.1 3.8 31 60-90 24-56 (266)
402 3uog_A Alcohol dehydrogenase; 67.6 4.5 0.00015 41.6 4.7 32 59-90 191-222 (363)
403 1txg_A Glycerol-3-phosphate de 67.3 3.5 0.00012 41.7 3.8 30 60-89 2-31 (335)
404 3two_A Mannitol dehydrogenase; 67.3 4.4 0.00015 41.4 4.5 32 59-90 178-209 (348)
405 1leh_A Leucine dehydrogenase; 67.1 4.3 0.00015 41.9 4.3 31 59-89 174-204 (364)
406 4eez_A Alcohol dehydrogenase 1 67.0 4.8 0.00017 40.9 4.8 31 60-90 166-197 (348)
407 3k96_A Glycerol-3-phosphate de 67.0 4.2 0.00014 41.8 4.3 32 59-90 30-61 (356)
408 3dtt_A NADP oxidoreductase; st 66.9 5.3 0.00018 38.6 4.8 32 59-90 20-51 (245)
409 2aef_A Calcium-gated potassium 66.9 2.6 8.8E-05 40.4 2.5 31 59-90 10-40 (234)
410 1yqd_A Sinapyl alcohol dehydro 66.8 4.8 0.00017 41.4 4.8 32 59-90 189-220 (366)
411 1t2d_A LDH-P, L-lactate dehydr 66.6 4.5 0.00015 41.0 4.3 32 59-90 5-37 (322)
412 1gpj_A Glutamyl-tRNA reductase 66.4 3.6 0.00012 43.1 3.7 32 59-90 168-200 (404)
413 1b37_A Protein (polyamine oxid 66.4 4.7 0.00016 43.0 4.8 56 195-256 206-269 (472)
414 1piw_A Hypothetical zinc-type 66.2 4.5 0.00015 41.6 4.3 32 59-90 181-212 (360)
415 1mv8_A GMD, GDP-mannose 6-dehy 66.1 3.4 0.00012 43.8 3.5 31 60-90 2-32 (436)
416 1uuf_A YAHK, zinc-type alcohol 65.7 5.3 0.00018 41.2 4.8 31 60-90 197-227 (369)
417 1z82_A Glycerol-3-phosphate de 65.5 4.7 0.00016 41.0 4.3 33 58-90 14-46 (335)
418 3gvp_A Adenosylhomocysteinase 65.5 4.7 0.00016 42.3 4.3 33 58-90 220-252 (435)
419 2d5c_A AROE, shikimate 5-dehyd 65.5 5.3 0.00018 39.0 4.5 31 60-90 118-148 (263)
420 1y8q_A Ubiquitin-like 1 activa 65.2 5.1 0.00018 41.0 4.5 36 57-92 35-71 (346)
421 1zej_A HBD-9, 3-hydroxyacyl-CO 65.1 4.8 0.00016 40.1 4.1 32 58-90 12-43 (293)
422 3tl2_A Malate dehydrogenase; c 64.8 5.1 0.00018 40.4 4.3 32 59-90 9-41 (315)
423 3g79_A NDP-N-acetyl-D-galactos 64.7 4 0.00014 43.8 3.7 33 59-91 19-53 (478)
424 3e8x_A Putative NAD-dependent 64.7 6.1 0.00021 37.5 4.7 32 59-90 22-54 (236)
425 3ew7_A LMO0794 protein; Q8Y8U8 64.7 6.5 0.00022 36.6 4.9 30 61-90 3-33 (221)
426 1guz_A Malate dehydrogenase; o 64.6 5.3 0.00018 40.1 4.5 31 60-90 2-34 (310)
427 1e3j_A NADP(H)-dependent ketos 64.6 5.7 0.0002 40.6 4.8 31 60-90 171-201 (352)
428 3h2s_A Putative NADH-flavin re 64.4 6.3 0.00022 36.9 4.7 30 61-90 3-33 (224)
429 3s2e_A Zinc-containing alcohol 64.4 4.5 0.00016 41.1 3.9 32 59-90 168-199 (340)
430 2cdc_A Glucose dehydrogenase g 64.3 4.6 0.00016 41.6 4.0 32 59-90 182-213 (366)
431 1pl8_A Human sorbitol dehydrog 64.0 6 0.0002 40.5 4.8 31 60-90 174-205 (356)
432 3mog_A Probable 3-hydroxybutyr 63.9 5.4 0.00018 42.9 4.5 31 60-90 7-37 (483)
433 2d8a_A PH0655, probable L-thre 63.8 5.6 0.00019 40.6 4.5 31 60-90 170-201 (348)
434 1v3u_A Leukotriene B4 12- hydr 63.7 6.1 0.00021 39.9 4.8 31 60-90 148-179 (333)
435 3pef_A 6-phosphogluconate dehy 63.7 5.6 0.00019 39.3 4.3 31 60-90 3-33 (287)
436 1c1d_A L-phenylalanine dehydro 63.6 5.6 0.00019 40.8 4.3 30 59-88 176-205 (355)
437 2hcy_A Alcohol dehydrogenase 1 63.5 6.4 0.00022 40.1 4.9 32 59-90 171-203 (347)
438 4e21_A 6-phosphogluconate dehy 63.4 5.5 0.00019 41.0 4.3 34 57-90 21-54 (358)
439 1ur5_A Malate dehydrogenase; o 63.0 5.7 0.0002 39.9 4.3 31 60-90 4-35 (309)
440 4e4t_A Phosphoribosylaminoimid 63.0 5.4 0.00019 42.0 4.3 32 59-90 36-67 (419)
441 3g0o_A 3-hydroxyisobutyrate de 63.0 5.8 0.0002 39.6 4.3 32 59-90 8-39 (303)
442 1hdo_A Biliverdin IX beta redu 62.9 7.2 0.00025 35.7 4.8 32 60-91 5-37 (206)
443 1a5z_A L-lactate dehydrogenase 62.9 4.9 0.00017 40.6 3.8 31 60-90 2-34 (319)
444 3nx4_A Putative oxidoreductase 62.8 5.9 0.0002 39.8 4.4 31 60-90 149-180 (324)
445 1rjw_A ADH-HT, alcohol dehydro 62.8 4.5 0.00015 41.2 3.5 31 60-90 167-197 (339)
446 3uko_A Alcohol dehydrogenase c 62.7 5.2 0.00018 41.4 4.1 32 59-90 195-227 (378)
447 2cf5_A Atccad5, CAD, cinnamyl 62.6 5.7 0.00019 40.7 4.3 32 59-90 182-213 (357)
448 1tt5_B Ubiquitin-activating en 62.6 6.3 0.00021 41.7 4.7 36 57-92 39-75 (434)
449 3aw8_A PURK, phosphoribosylami 62.6 5.7 0.00019 40.8 4.3 30 61-90 2-31 (369)
450 2dq4_A L-threonine 3-dehydroge 62.5 6.2 0.00021 40.1 4.5 32 59-90 166-198 (343)
451 3doj_A AT3G25530, dehydrogenas 62.5 6 0.0002 39.7 4.3 32 59-90 22-53 (310)
452 3gpi_A NAD-dependent epimerase 62.0 7.6 0.00026 38.0 5.0 32 60-91 5-36 (286)
453 2f1k_A Prephenate dehydrogenas 62.0 6.3 0.00021 38.7 4.3 31 60-90 2-32 (279)
454 4gx0_A TRKA domain protein; me 61.8 7 0.00024 42.9 5.1 34 59-92 349-382 (565)
455 3fpc_A NADP-dependent alcohol 61.6 6.2 0.00021 40.3 4.4 32 59-90 168-200 (352)
456 1h2b_A Alcohol dehydrogenase; 61.6 5.9 0.0002 40.6 4.2 31 60-90 189-220 (359)
457 4b7c_A Probable oxidoreductase 61.5 6 0.0002 40.1 4.2 32 59-90 151-183 (336)
458 2pv7_A T-protein [includes: ch 61.4 6.3 0.00021 39.3 4.2 31 60-90 23-54 (298)
459 3pid_A UDP-glucose 6-dehydroge 61.2 5.7 0.0002 41.9 4.0 31 59-90 37-67 (432)
460 4eye_A Probable oxidoreductase 61.1 6 0.0002 40.3 4.1 32 59-90 161-193 (342)
461 2ivd_A PPO, PPOX, protoporphyr 61.0 7.9 0.00027 41.2 5.3 57 195-257 238-294 (478)
462 2dkn_A 3-alpha-hydroxysteroid 60.9 8.1 0.00028 36.9 4.9 31 61-91 4-35 (255)
463 3c7a_A Octopine dehydrogenase; 60.8 4.4 0.00015 42.4 3.1 29 60-88 4-33 (404)
464 3l6d_A Putative oxidoreductase 60.6 8.9 0.0003 38.3 5.2 32 59-90 10-41 (306)
465 2dph_A Formaldehyde dismutase; 60.6 6.2 0.00021 41.1 4.2 31 60-90 188-219 (398)
466 1u7z_A Coenzyme A biosynthesis 60.5 7.7 0.00026 37.0 4.4 31 60-90 10-57 (226)
467 1y6j_A L-lactate dehydrogenase 60.4 6.8 0.00023 39.5 4.3 32 59-90 8-41 (318)
468 1evy_A Glycerol-3-phosphate de 60.4 4.2 0.00014 41.9 2.8 31 60-90 17-47 (366)
469 1iz0_A Quinone oxidoreductase; 60.3 6.5 0.00022 39.1 4.1 32 59-90 127-159 (302)
470 2qyt_A 2-dehydropantoate 2-red 60.2 4.9 0.00017 40.2 3.2 30 60-89 10-45 (317)
471 1e3i_A Alcohol dehydrogenase, 60.1 6.7 0.00023 40.5 4.3 32 59-90 197-229 (376)
472 3gvi_A Malate dehydrogenase; N 60.0 7.4 0.00025 39.4 4.5 32 59-90 8-40 (324)
473 1dlj_A UDP-glucose dehydrogena 60.0 5.5 0.00019 41.7 3.6 30 60-90 2-31 (402)
474 3tum_A Shikimate dehydrogenase 59.9 8.3 0.00028 37.9 4.7 31 59-89 126-157 (269)
475 2h6e_A ADH-4, D-arabinose 1-de 59.8 5.8 0.0002 40.4 3.8 31 59-89 172-204 (344)
476 4ej6_A Putative zinc-binding d 59.8 6.9 0.00023 40.4 4.3 31 59-89 184-215 (370)
477 3goh_A Alcohol dehydrogenase, 59.8 5.9 0.0002 39.7 3.7 30 59-88 144-173 (315)
478 1tt7_A YHFP; alcohol dehydroge 59.8 7.3 0.00025 39.3 4.5 31 60-90 153-184 (330)
479 3qwb_A Probable quinone oxidor 59.8 6.5 0.00022 39.7 4.1 32 59-90 150-182 (334)
480 2g5c_A Prephenate dehydrogenas 59.7 7.3 0.00025 38.2 4.4 31 60-90 3-35 (281)
481 3ax6_A Phosphoribosylaminoimid 59.6 7.8 0.00027 40.0 4.8 31 60-90 3-33 (380)
482 2j3h_A NADP-dependent oxidored 59.6 6.7 0.00023 39.8 4.2 31 60-90 158-189 (345)
483 2uyy_A N-PAC protein; long-cha 59.3 7.7 0.00026 38.9 4.5 32 59-90 31-62 (316)
484 3m6i_A L-arabinitol 4-dehydrog 59.3 8.5 0.00029 39.4 4.9 32 59-90 181-213 (363)
485 3ggo_A Prephenate dehydrogenas 59.1 7.5 0.00026 39.1 4.4 32 59-90 34-67 (314)
486 1hyh_A L-hicdh, L-2-hydroxyiso 59.1 6.1 0.00021 39.6 3.7 31 60-90 3-35 (309)
487 3k5i_A Phosphoribosyl-aminoimi 59.0 7.2 0.00025 40.8 4.4 31 58-88 24-54 (403)
488 1edz_A 5,10-methylenetetrahydr 58.9 5.4 0.00019 40.2 3.2 33 58-90 177-210 (320)
489 4fs3_A Enoyl-[acyl-carrier-pro 58.8 7.6 0.00026 37.7 4.2 30 61-90 9-41 (256)
490 2jhf_A Alcohol dehydrogenase E 58.8 7.3 0.00025 40.1 4.3 31 60-90 194-225 (374)
491 1yb5_A Quinone oxidoreductase; 58.6 8.5 0.00029 39.3 4.8 31 60-90 173-204 (351)
492 3ius_A Uncharacterized conserv 58.6 7.8 0.00027 37.9 4.4 31 60-90 7-37 (286)
493 2pbz_A Hypothetical protein; N 58.5 7.7 0.00026 39.2 4.3 30 60-90 4-33 (320)
494 1kol_A Formaldehyde dehydrogen 58.4 8.4 0.00029 40.0 4.8 31 60-90 188-219 (398)
495 3k31_A Enoyl-(acyl-carrier-pro 58.2 7.8 0.00027 38.4 4.3 31 60-90 32-65 (296)
496 4dll_A 2-hydroxy-3-oxopropiona 58.1 6.1 0.00021 39.9 3.5 32 59-90 32-63 (320)
497 3d3w_A L-xylulose reductase; u 58.1 9.4 0.00032 36.3 4.8 31 60-90 9-40 (244)
498 2pd4_A Enoyl-[acyl-carrier-pro 58.1 7.4 0.00025 38.0 4.1 31 60-90 8-41 (275)
499 1p0f_A NADP-dependent alcohol 58.1 6.4 0.00022 40.6 3.8 32 59-90 193-225 (373)
500 1cdo_A Alcohol dehydrogenase; 58.0 7.7 0.00026 40.0 4.3 31 60-90 195-226 (374)
No 1
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=100.00 E-value=3.4e-116 Score=991.66 Aligned_cols=612 Identities=80% Similarity=1.318 Sum_probs=563.0
Q ss_pred CCCCcccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCC
Q psy15089 50 REYPVVDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDW 129 (661)
Q Consensus 50 ~~~~~~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~ 129 (661)
..++.++.++||||||||+|||+||+.|+++|++|+||||....+++|.+++||+++.++....|++++|+.|+++.+.+
T Consensus 10 ~~~~~~~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~ 89 (621)
T 2h88_A 10 TQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDW 89 (621)
T ss_dssp CCSCEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTT
T ss_pred cCCccccccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCC
Confidence 44566678899999999999999999999999999999999888889999999999887765678999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCC
Q psy15089 130 LGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYD 209 (661)
Q Consensus 130 l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~g 209 (661)
++++++++.+++.+++.++||+++|++|.+..+|.++...++|++..++.+...+|+++..+.+|..++..|.+++++.|
T Consensus 90 l~d~~~v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~g 169 (621)
T 2h88_A 90 LGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYD 169 (621)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999998898888889999887766666678888888899999999999999999
Q ss_pred cEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCccCCCcc
Q psy15089 210 CNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLEF 289 (661)
Q Consensus 210 v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~l~~~ef 289 (661)
++++.++.|++|+.++++|.||.+.+..+|+...|+||+|||||||++.+|..+++++.+||||++||+++||.+.+|||
T Consensus 170 v~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~~t~~~~~tGdG~~mA~raGa~l~~me~ 249 (621)
T 2h88_A 170 TSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEF 249 (621)
T ss_dssp CEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTC
T ss_pred CEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccccCCcCCCCCCChHHHHHHHHcCCCcccCcc
Confidence 99999999999999999999999988778888889999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHhcCCCCCCCCcEEEeCCCCC
Q psy15089 290 VQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGPDKDHVYLQLHHLP 369 (661)
Q Consensus 290 ~q~~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~g~g~~~~~~~v~~d~~~~~ 369 (661)
+||||++++..+++++|+++++|++++|.+|+|||++|.|...++++||+++++|..++.+++|+.|..++||+|+++++
T Consensus 250 ~q~hPt~~~~~~~l~se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~e~~~g~g~~~~~~~v~ld~~~l~ 329 (621)
T 2h88_A 250 VQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLP 329 (621)
T ss_dssp EEEEEEEETTTCCBCCTHHHHTTCEEECTTCCCTHHHHSTTTGGGSCHHHHHHHHHHHHHTTCCBTTTTCBEEEECTTSC
T ss_pred eeeecccccCCcceecccccCCccEEECCCCCCcccccCcccccccchHHHHHHHHHHHHhcCCcccCCCeEEEEcccCC
Confidence 99999999988999999999999999999999999999998889999999999999999999887666678999999999
Q ss_pred hHHHHhHhhhHHHHHHHHcCCCCCCCCeeeeccccccccCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCcc
Q psy15089 370 PEDLHQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRL 449 (661)
Q Consensus 370 ~~~l~~~~~~~~~~~~~~~gid~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrl 449 (661)
++.+.+++|.+++.+..+.|+|+.++|+||.|++||+||||+||.++||++.++...|+||||||||||+|+|+||+|||
T Consensus 330 ~~~l~~~~~~i~~~~~~~~G~D~~~~pi~v~p~~h~tmGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrl 409 (621)
T 2h88_A 330 PQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRL 409 (621)
T ss_dssp HHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEESCBEEBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecccccCcEeECCCCeEeecccCCCcccCceEEccccccccccCCCCC
Confidence 99999999999998887779999999999999999999999999999999854344699999999999998899999999
Q ss_pred chhhhhhHHHHHHHHHHHHHHhcCCCCCCCcccccchhhhHhhhhHhhhcCCCCCHHHHHHHHHHHhcccceeeeCHHHH
Q psy15089 450 GANSLLDLVVFGRACAKTIAEENKPGAPIKPFAANAGESSVANLDWVRHAKGDITTADLRLTMQKTMQTYAAVFRTQETL 529 (661)
Q Consensus 450 gg~~l~~a~v~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~R~~~~L 529 (661)
|||||++|+|||++||++|+++++.....+.+.....+...+++..++..++..++.+++.+||++||+|+||+|++++|
T Consensus 410 ggnsL~~~~vfGr~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L 489 (621)
T 2h88_A 410 GANSLLDLVVFGRACALTIAETCKPGEPVPSIKPNAGEESVANLDKLRFADGTIRTSEARLNMQKTMQSHAAVFRTGSIL 489 (621)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHCCTTCCCCCCCTTTTHHHHHHHHHHHTCBSSEEHHHHHHHHHHHHHHHSSSSBCHHHH
T ss_pred chHhHHHHHHHHHHHHHHHHHhhhccccccccchhHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHhhhceeEecCHHHH
Confidence 99999999999999999999987542222233333344555667777766777889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCCCccccccCCCCccccccCCCCCC
Q psy15089 530 QEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRGAHAREDFKVRVDELDYAKPLEG 609 (661)
Q Consensus 530 ~~al~~l~~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESRG~H~R~D~P~~dd~~~~~~~~~~ 609 (661)
++|+++|++|+++++++.+.|.+..||++|++++|++||+++|++++.|||+|+||||+|||+|||++||+++|++||.|
T Consensus 490 ~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~al~R~ESRG~H~R~D~p~~dd~~~~~~~~~~ 569 (621)
T 2h88_A 490 QEGCEKLSQIYRDLAHLKTFDRGIVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKLRIDEFDYSKPLQG 569 (621)
T ss_dssp HHHHHHHHHHHHGGGGEECCCCCSTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCCSSCTTSCCTT
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHhCcccccceecccCcccCccccccCCccc
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccceEEEEeeCCCCceEEEeecccccccCcccccccCCCCCCC
Q psy15089 610 QVPKPIEEHWRKHTLTDVDVNTGKVKIYYRPVIDKTLDAKECATIAPAIRSY 661 (661)
Q Consensus 610 ~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~r~y 661 (661)
|.|||+++||+||++++++.++|+++++|+||..++|+++++..+||+.|+|
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~r~y 621 (621)
T 2h88_A 570 QQKRPFEEHWRKHTLSYVDVKSGKVTLKYRPVIDRTLNEEDCSSVPPAIRSY 621 (621)
T ss_dssp CCCCCGGGCCCEEEEEEEETTTTEEEEEEEECCCCCSCTTTSCCCCCCCCCC
T ss_pred ccCCcchhccceeEEEEEcCCCCceEEEecccccccccccccceeCCcCCCC
Confidence 9999999999999999876456889999999999999998999999999998
No 2
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=100.00 E-value=4e-102 Score=882.74 Aligned_cols=566 Identities=37% Similarity=0.604 Sum_probs=505.0
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCC---CCCHHHHHHHHHhccCCCCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNME---EDDWHWHMYDTVKGSDWLGD 132 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~---~d~~~~~~~d~~~~g~~l~~ 132 (661)
+.++||||||||+|||+||+.|+++|++|+||||....+++|.+++||+++..++.. .|++++|+.|+++.+.++++
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 356899999999999999999999999999999998888999999999998776543 68899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCcccCCCCc---------------------ccccccCCcccccCCCCccceeeeccC
Q psy15089 133 QDAIHYMTREAPKAVIELENYGMPFSRTTDGK---------------------IYQRAFGGQSLKYGKGGQAHRCCAVAD 191 (661)
Q Consensus 133 ~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~---------------------~~~~~~gg~~~~~~~g~~~~r~~~~~~ 191 (661)
++.++.+++.+++.++||.++|++|.+..+|. +....++|++ .+|.++..+
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~--------~~R~~~~~d 154 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTK--------KWRTCYTAD 154 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCS--------SCCEECSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccc--------cceeEeeCC
Confidence 99999999999999999999999998876664 3333455544 367777778
Q ss_pred CcHHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCC
Q psy15089 192 RTGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTG 271 (661)
Q Consensus 192 ~~g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tG 271 (661)
.+|..++..|.+++++.|++|+.++.|++|+.++++|+||.+.+..+|+...|+||+|||||||++.+|..+++++.+||
T Consensus 155 ~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~y~~tt~~~~~tG 234 (660)
T 2bs2_A 155 ATGHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEG 234 (660)
T ss_dssp CHHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGGSSSBSSCTTCSC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhhcCCCCCCCCccc
Confidence 88999999999999999999999999999999999999999987778888889999999999999999999999999999
Q ss_pred hHHHHHHHcCC-ccCCCcccccccccccCCCceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHh
Q psy15089 272 DGTAMISRAGL-PNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIRE 350 (661)
Q Consensus 272 dG~~~a~~aGa-~l~~~ef~q~~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~ 350 (661)
||++||+++|+ .+.+|||+||||+++++.+++++++++++|++++|.+|+|||++|.|...++++||+++++|..++.+
T Consensus 235 dG~~mA~~aGa~~l~~me~~q~hPt~~~~~~~l~se~~rg~g~ilvn~~G~RF~~~y~p~~~ela~rdvv~rai~~~~~~ 314 (660)
T 2bs2_A 235 TGTAIALETGIAQLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRK 314 (660)
T ss_dssp HHHHHHHTTSSSCEECTTCEEEESCBBTTTCCBCCTHHHHHTCEEECTTCCBCHHHHCTTTGGGSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCChhcCchhheecccccCCCcceecccccCCCcEEECCCCCCcCcccCcccccccchHHHHHHHHHHHHh
Confidence 99999999999 99999999999999998889999999999999999999999999999877999999999999999998
Q ss_pred cCCC-CCCCCcEEEeCCCCChHHHHhHhhhHHHHHHHHcCCCCCCCCeeeeccccccccCcccCCCCeEEeecCCCCccc
Q psy15089 351 GRGV-GPDKDHVYLQLHHLPPEDLHQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKII 429 (661)
Q Consensus 351 g~g~-~~~~~~v~~d~~~~~~~~l~~~~~~~~~~~~~~~gid~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~T~i 429 (661)
++++ .|..+.+|+|+++++++.+..++|.+.+.+..+.|+||.++|+||.|+.||+||||+||.+++ |+|
T Consensus 315 g~g~~~~~~~~v~ld~~~~~~~~~~~~~p~i~e~~~~~~GiD~~~~~ipv~p~~hyt~GGi~vd~~~~---------v~I 385 (660)
T 2bs2_A 315 GKGVQSPYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGE---------AKL 385 (660)
T ss_dssp TTSBCCTTCCBEEEECGGGCHHHHHHHSHHHHHHHHHTSCCCTTTSCEEECCEEEEECCEEECCTTSB---------CSS
T ss_pred cCCccCCCCCEEEEECCCCCHHHHHHHhHHHHHHHHHhcCCCCcccceEeeeeeeeccceEEECCCCc---------eec
Confidence 8775 234467999999999999999999999998876799999999999999999999999999987 799
Q ss_pred cceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhcCCCCCC--CcccccchhhhHhhhhHhhhcCCCCCHHH
Q psy15089 430 HGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENKPGAPI--KPFAANAGESSVANLDWVRHAKGDITTAD 507 (661)
Q Consensus 430 pGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (661)
|||||||||+|+++||+||||||||++|+|||++||++|+++++..... +.+.....+...+++..++..++..++.+
T Consensus 386 pGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (660)
T 2bs2_A 386 KGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLETKTLEKFVKGQEAYMKSLVESKGTEDVFK 465 (660)
T ss_dssp BTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCBCHHH
T ss_pred CCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhcCcccccccchhHHHHHHHHHHHHhhccCCCCHHH
Confidence 9999999998899999999999999999999999999999887411110 11111122334455556666666788999
Q ss_pred HHHHHHHHhcccceeeeCHHHHHHHHHHHHHHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCCC
Q psy15089 508 LRLTMQKTMQTYAAVFRTQETLQEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRG 587 (661)
Q Consensus 508 ~~~~l~~~m~~~~g~~R~~~~L~~al~~l~~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESRG 587 (661)
++.+||++||+|+||+|++++|++|+++|++|++++.++.+.|.+..||++|++++|++||+++|++++.|||+|+||||
T Consensus 466 ~~~~l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~l~~a~~~~~~Al~R~ESRG 545 (660)
T 2bs2_A 466 IKNRMKDVMDDNVGIFRDGPHLEKAVKELEELYKKSKNVGIKNKRLHANPELEEAYRVPMMLKVALCVAKGALDRTESRG 545 (660)
T ss_dssp HHHHHHHHHHHHSSSSBCHHHHHHHHHHHHHHHHHHTTBCCSCCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBT
T ss_pred HHHHHHHHHHhcCceecCHHHHHHHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred ccccccCCCCccccccCCCCCCCCCCCccccccceEEEEeeC-CCCceEEEeecccccccCcccccccCCCCCCC
Q psy15089 588 AHAREDFKVRVDELDYAKPLEGQVPKPIEEHWRKHTLTDVDV-NTGKVKIYYRPVIDKTLDAKECATIAPAIRSY 661 (661)
Q Consensus 588 ~H~R~D~P~~dd~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~-~~g~~~~~~~~v~~~~~~~~~~~~~~~~~r~y 661 (661)
+|||+|||++||+ +|+||++++++. ++++++++|+||.++ ++.+||+.|+|
T Consensus 546 ~H~R~D~p~~dd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~r~y 597 (660)
T 2bs2_A 546 AHNREDYPKRDDI-----------------NWLNRTLASWPNPEQTLPTLEYEALDVN------EMEIAPGYRGY 597 (660)
T ss_dssp TBCBTTBCSEETT-----------------TCCEEEEEECCSTTCSSCEEEEEECCGG------GCSSCSCCCSS
T ss_pred eeecccCcccCch-----------------hhceEEEEEecCCCCCcceEEEeecccc------ccccCCccccc
Confidence 9999999999999 999999988752 227899999999753 14699999998
No 3
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=100.00 E-value=3.2e-101 Score=869.57 Aligned_cols=581 Identities=53% Similarity=0.850 Sum_probs=514.2
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
+.++||||||||+||++||+.|+++|++|+||||....++++.+++||+++..+....|+++.|+.|+++.+.+++++++
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 45799999999999999999999999999999999888888889999999877654468899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEe
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVE 215 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~ 215 (661)
++.+++++++.++||.++|++|.+..+|.+....+++++..++. ...+|.++..+.+|..++..|.+++++.|++++++
T Consensus 85 v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~-~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~ 163 (588)
T 2wdq_A 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGG-EQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSE 163 (588)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTC-SBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEET
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccc-cCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 99999999999999999999999888888777777887743321 22467777788889999999999999999999999
Q ss_pred EEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCccCCCccccccc
Q psy15089 216 YFALDLIIE-NGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLEFVQFHP 294 (661)
Q Consensus 216 ~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~l~~~ef~q~~p 294 (661)
+.|++|+.+ +++|+||.+.+..+|+...|.||.||+||||++.+|..+++++.+||||++||+++||.+.+|||+||||
T Consensus 164 ~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y~~~~~~~~~tGdG~~ma~~aGa~l~~me~~q~hp 243 (588)
T 2wdq_A 164 WYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHP 243 (588)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGSSSBSSCTTCCCHHHHHHHHTTCCEECTTCEEEEE
T ss_pred cEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccccCCcCCCCCchHHHHHHHHHcCCCEeChhHhheec
Confidence 999999996 7899999998767888888999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHhcCCC-CCCCCcEEEeCCCCChHHH
Q psy15089 295 TGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGV-GPDKDHVYLQLHHLPPEDL 373 (661)
Q Consensus 295 ~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~g~g~-~~~~~~v~~d~~~~~~~~l 373 (661)
+.+++.+.+++++++++|++++|.+|+|||++|+|...++++||+++++|..++.+++++ .+..+.+|+|+++++++.+
T Consensus 244 t~~~~~~~l~~e~~rg~g~ilvn~~G~RF~~~~~~~~~el~~rd~v~~ai~~~~~~~~~~~~~~~~~v~ld~~~~~~~~~ 323 (588)
T 2wdq_A 244 TGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVL 323 (588)
T ss_dssp EEETTTCCBCCTHHHHTTCEEECTTCCCTHHHHCTTTGGGSCHHHHHHHHHHHHHTTCSBCSTTCSBEEEECGGGHHHHH
T ss_pred ceecCCcceeeehhccCCcEEECCCCCCCccccCcccchhccHHHHHHHHHHHHHhCCCccCCCCCeEEEecccCCHHHH
Confidence 999888889999999999999999999999999998779999999999999999988775 2334679999999999999
Q ss_pred HhHhhhHHHHHHHHcCCCCCCCCeeeeccccccccCcccCCCCeEEeecC-CCCccccceeeeccccccCCCCCCccchh
Q psy15089 374 HQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVN-GQDKIIHGLYAAGEASCSSVHGANRLGAN 452 (661)
Q Consensus 374 ~~~~~~~~~~~~~~~gid~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~-~~~T~ipGLyAaGe~a~~g~hGanrlgg~ 452 (661)
.+++|.+.+.+..+.|+||.++|+||.|+.||+||||+||.++||++.+. ...++||||||||||+|+|+||+||||||
T Consensus 324 ~~~~~~i~e~~~~~~GiD~~~~~i~v~p~~h~t~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~gn 403 (588)
T 2wdq_A 324 ESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGN 403 (588)
T ss_dssp HHHCHHHHHHHHHHTCCCTTTSCEEEEEEEEEECCBEEBCTTCEEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTTH
T ss_pred HHHhhHHHHHHHHhCCCCCCCCcEEEeccccccCceEEECCCCCCcccccccCCCeeCCceeCccccccCCCCCCCCcch
Confidence 99999999998876699999999999999999999999999999987621 11468999999999988899999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCCCCcccccchhhhHhhhhHhhhcCCCCCHHHHHHHHHHHhcccceeeeCHHHHHHH
Q psy15089 453 SLLDLVVFGRACAKTIAEENKPGAPIKPFAANAGESSVANLDWVRHAKGDITTADLRLTMQKTMQTYAAVFRTQETLQEG 532 (661)
Q Consensus 453 ~l~~a~v~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~R~~~~L~~a 532 (661)
||++|+|||++||++|+++++.....+.+.....+...+++..++..++..++.+++.+||++||+++||+|++++|++|
T Consensus 404 sl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~gi~R~~~~L~~a 483 (588)
T 2wdq_A 404 SLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKG 483 (588)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHCCCCCCCHHHHHHTTHHHHHHHHCCSSBCHHHHHHHHHHHHHHHSSSSBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhccCcccccchhhhhhHHHHHHHhhccCCCcCHHHHHHHHHHHHhhcCcEecCHHHHHHH
Confidence 99999999999999999876321111222222223334445555555566789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCCCccccccCCCCccccccCCCCCCCCC
Q psy15089 533 CNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRGAHAREDFKVRVDELDYAKPLEGQVP 612 (661)
Q Consensus 533 l~~l~~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESRG~H~R~D~P~~dd~~~~~~~~~~~~~ 612 (661)
+++|+.|++++.++.+.|.+..||++|++++|++||+++|+++++|||+|+||||+|||+|||++||+
T Consensus 484 ~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~p~~~~~------------ 551 (588)
T 2wdq_A 484 LEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDE------------ 551 (588)
T ss_dssp HHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBSSSCSCCHH------------
T ss_pred HHHHHHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhCccceeeeecccCCccChh------------
Confidence 99999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred CCccccccceEEEEeeCCCCceEEEeecccccccCcccccccCCCCCCC
Q psy15089 613 KPIEEHWRKHTLTDVDVNTGKVKIYYRPVIDKTLDAKECATIAPAIRSY 661 (661)
Q Consensus 613 ~~~~~~w~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~r~y 661 (661)
+|+||++++ + |.++++|+||. ++++++.++||+.|+|
T Consensus 552 -----~~~~~~~~~-~---~~~~~~~~~v~---~~~~~~~~~~~~~r~y 588 (588)
T 2wdq_A 552 -----NWLCHSLYL-P---ESESMTRRSVN---MEPKLRPAFPPKIRTY 588 (588)
T ss_dssp -----HHSSEEEEE-T---TTTEEEEECCC---CCCSSSCCCCCCCCCC
T ss_pred -----hhheeEEEE-C---CCceEEEeecc---CccccccccCCCCCCC
Confidence 999999987 3 46899999997 5556788899999998
No 4
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=100.00 E-value=4.3e-98 Score=845.56 Aligned_cols=561 Identities=42% Similarity=0.680 Sum_probs=498.3
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCC--CcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCH
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEG--FKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQ 133 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G--~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~ 133 (661)
+.++||||||||+||++||+.|++.| ++|+||||....++++.+++||+++.+.. .|+++.|+.|+++.+.+++++
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~--~ds~~~~~~d~~~~g~~~~d~ 80 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQD--HDSFEYHFHDTVAGGDWLCEQ 80 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCST--TCCHHHHHHHHHHHTTTCSCH
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCC--CCCHHHHHHHHHHhcCCCCCH
Confidence 34689999999999999999999999 99999999887788888999999877653 688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCC-cEE
Q psy15089 134 DAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYD-CNY 212 (661)
Q Consensus 134 ~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~g-v~i 212 (661)
++++.+++++++.++||.++|++|.+.++|.++...++|++. +|.++..+.+|..++..|.+++++.| +++
T Consensus 81 ~~v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~--------~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i 152 (602)
T 1kf6_A 81 DVVDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKI--------ERTWFAADKTGFHMLHTLFQTSLQFPQIQR 152 (602)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSS--------CCEECSTTCHHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccC--------CeEEEcCCCCHHHHHHHHHHHHHhCCCcEE
Confidence 999999999999999999999999988888776666777653 57777788889999999999999888 999
Q ss_pred EEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCccCCCccccc
Q psy15089 213 FVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLEFVQF 292 (661)
Q Consensus 213 ~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~l~~~ef~q~ 292 (661)
+.++.|++|+.++++|+|+.+.+..+|+...|+|+.||+||||++.+|..+++++.++|||+.|++++|+.+.+|||+||
T Consensus 153 ~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~~~~~~tGdgi~~a~~aGa~~~~~e~~qf 232 (602)
T 1kf6_A 153 FDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMALSHGVPLRDMEFVQY 232 (602)
T ss_dssp EETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBSSCTTCSCHHHHHHHTTTCCEESTTCEEE
T ss_pred EeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcCCCCCcccHHHHHHHHcCCCccChhHhhc
Confidence 99999999999999999999887778887789999999999999999999899999999999999999999999999999
Q ss_pred ccccccCCCceecccccCCCcEEEcCCCCccccccc---------cccc--cccchhHhhhhHHHHHHhcCCC-CCCCCc
Q psy15089 293 HPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYA---------PVAK--DLASRDVVSRSMTIEIREGRGV-GPDKDH 360 (661)
Q Consensus 293 ~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~---------p~~~--~l~~rd~~~~~i~~e~~~g~g~-~~~~~~ 360 (661)
||+++++.+++++++++++|++++|.+|+|||++|+ |... ++++||++++++..++.+++++ .+..+.
T Consensus 233 hPt~~~~~~~l~~e~~rg~g~~lvn~~G~RF~~~y~~~~~~~~~~p~~~~~el~~rd~v~~ai~~~~~~g~g~~~~~~~~ 312 (602)
T 1kf6_A 233 HPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDV 312 (602)
T ss_dssp EEEECTTTCCBCCTHHHHTTCEEECTTCCCGGGGTTTCSCCCSSCCCTTSGGGSCHHHHHHHHHHHHHHTCSBCCTTCCB
T ss_pred cccccCCCcceechhhcCCceEEECCCCCCccccccccccccccCCcccccccccHHHHHHHHHHHHHhcCCccCCCCcE
Confidence 999998888999999999999999999999999998 6555 8999999999999999988763 234567
Q ss_pred EEEeCCCCChHHHHhHhhhHHHHHHHHcCCCCCCCCeeeeccccccccCcccCCCCeEEeecCCCCccccceeeeccccc
Q psy15089 361 VYLQLHHLPPEDLHQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASC 440 (661)
Q Consensus 361 v~~d~~~~~~~~l~~~~~~~~~~~~~~~gid~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~ 440 (661)
||+|+++++++.+.+++|.+++.+..+.|+||.++|+||.|+.||+||||+||.+++ |+||||||||||+|
T Consensus 313 v~ld~~~~~~~~l~~~~~~~~~~~~~~~G~D~~~~pi~v~p~~h~t~GGi~vd~~~~---------~~IpGLyAaGe~a~ 383 (602)
T 1kf6_A 313 VYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCE---------TRIKGLFAVGECSS 383 (602)
T ss_dssp EEEECGGGCHHHHHHHCHHHHHHHHHHHCCCTTTSCEEEEEEEEEECCEEECCTTSB---------CSSBTEEECGGGEE
T ss_pred EEeecccCCHHHHHHHHHHHHHHHHHhcCCCCCcCceEEehhheeeCCeEEECCCCc---------cccCCEEEcccccc
Confidence 999999999999999999999999877799999999999999999999999999987 79999999999998
Q ss_pred cCCCCCCccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCc-ccccchhhhHhhhhHhhhcCCCCCHHHHHHHHHHHhccc
Q psy15089 441 SSVHGANRLGANSLLDLVVFGRACAKTIAEENKPGAPIKP-FAANAGESSVANLDWVRHAKGDITTADLRLTMQKTMQTY 519 (661)
Q Consensus 441 ~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~ 519 (661)
+|+||+|||+||||++|+|||++||++|++++......+. ......+...+++..++..++..++.+++.+||++||+|
T Consensus 384 ~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~ 463 (602)
T 1kf6_A 384 VGLHGANRLGSNSLAELVVFGRLAGEQATERAATAGNGNEAAIEAQAAGVEQRLKDLVNQDGGENWAKIRDEMGLAMEEG 463 (602)
T ss_dssp CSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHCCCCBCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhccCCCCcchhhhhhHHHHHHHhhhhccCCCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999988632111100 000122223344455555566788999999999999999
Q ss_pred ceeeeCHHHHHHHHHHHHHHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCCCcccccc--CCCC
Q psy15089 520 AAVFRTQETLQEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRGAHARED--FKVR 597 (661)
Q Consensus 520 ~g~~R~~~~L~~al~~l~~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESRG~H~R~D--~P~~ 597 (661)
+||+|++++|++|+++|++|++++.++.+.|.+..||++|++++|++||+++|+++++|||+|+||||+|||+| ||++
T Consensus 464 ~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e~~~~~~~a~~~~~~al~R~ESRG~H~r~D~~~p~~ 543 (602)
T 1kf6_A 464 CGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIELGHGLNVAECMAHSAMARKESRGAHQRLDEGCTER 543 (602)
T ss_dssp SSSSBCHHHHHHHHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBCSTTCSSC
T ss_pred CCeecCHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhCcCccceEEecccCCCcc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999 9999
Q ss_pred ccccccCCCCCCCCCCCccccccceEEEEeeCCCCceEEEeecccccccCcccccccCCCCCCC
Q psy15089 598 VDELDYAKPLEGQVPKPIEEHWRKHTLTDVDVNTGKVKIYYRPVIDKTLDAKECATIAPAIRSY 661 (661)
Q Consensus 598 dd~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~r~y 661 (661)
||+ +|++|++++++ .++++.++|+||.+ ..+||+.|.|
T Consensus 544 d~~-----------------~~~~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~r~y 581 (602)
T 1kf6_A 544 DDV-----------------NFLKHTLAFRD-ADGTTRLEYSDVKI--------TTLPPAKRVY 581 (602)
T ss_dssp CTT-----------------TCCEEEEEEEC-TTSCEEEEEEECCC--------SSCCCC----
T ss_pred Cch-----------------hhheEEEEEEc-CCCCceEEEeeccc--------cccCCcCccc
Confidence 999 99999998876 33689999999974 3589999988
No 5
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=100.00 E-value=9.6e-92 Score=796.90 Aligned_cols=543 Identities=20% Similarity=0.240 Sum_probs=447.3
Q ss_pred CCcccccccEEEECCcHHHHHHHHHhHHC------CCcEEEEEecCCCCCCcccccC--ceEEccCCCCCCCHHHHHHHH
Q psy15089 52 YPVVDHQFDAVVVGAGGAGLRAAFGLVAE------GFKTAVITKLFPTRSHTVAAQG--GINAALGNMEEDDWHWHMYDT 123 (661)
Q Consensus 52 ~~~~~~~~DVlVVGgG~AGl~AA~~aa~~------G~~V~liek~~~~~~~s~~a~G--g~~~~~~~~~~d~~~~~~~d~ 123 (661)
++....++||||||||+|||+||+.|++. |++|+||||....++++ .++| |+++.++ .++++.++.++
T Consensus 16 ~~~~~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s-~AqG~~gi~a~l~---~ds~e~~~~~~ 91 (662)
T 3gyx_A 16 PIIVEHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGA-VAQGLSAINTYLG---DNNADDYVRMV 91 (662)
T ss_dssp CCCEEEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCST-TTTCEEEECCCCT---TSCHHHHHHHH
T ss_pred CccceEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcc-cccCcchheeecC---CCCHHHHHHHH
Confidence 34446789999999999999999999997 99999999998877766 5788 7777664 57788888888
Q ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccC-CCCcccc----cccCCcccccCCCCccceeeeccCCcHHHHH
Q psy15089 124 VKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRT-TDGKIYQ----RAFGGQSLKYGKGGQAHRCCAVADRTGHSLL 198 (661)
Q Consensus 124 ~~~g~~l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~-~~g~~~~----~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~ 198 (661)
+..+.+++++++++.+++++++.++||+++|++|++. ++|.++. ..|++.... .+...+|.++..+.+|..+.
T Consensus 92 ~~~~~gl~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~--gg~~~~r~~~~~~~~G~~i~ 169 (662)
T 3gyx_A 92 RTDLMGLVREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRN--GDKPVRSGRWQIMINGESYK 169 (662)
T ss_dssp HHHTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTT--TCCBCCSSTTCEEEEETSHH
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhcccccccc--CccccccceecccCCHHHHH
Confidence 8888899999999999999999999999999999987 6776542 122222111 11122344333455677899
Q ss_pred HHHHHHHHhC--CcEEEEeEEEEEEEEeCC---EEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCC--------
Q psy15089 199 HTLYGQSLRY--DCNYFVEYFALDLIIENG---ECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTS-------- 265 (661)
Q Consensus 199 ~~L~~~a~~~--gv~i~~~~~v~~l~~~~g---~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~-------- 265 (661)
..|.+++++. ||+++.++.|++|+.+++ +|+||++.+..+|+...|+||+|||||||++++|.++++
T Consensus 170 ~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y~~~t~~~~~~~~~ 249 (662)
T 3gyx_A 170 VIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNVYRPRSVGEGMGRAW 249 (662)
T ss_dssp HHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCS
T ss_pred HHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccccccCcCCcccccccc
Confidence 9999999887 999999999999999876 999999988788988899999999999999999987665
Q ss_pred -CCCCCChHHHHHHHcCCccCCCcccccccccccC---C---CceecccccCCCcEEEcCCCCccccccccccc------
Q psy15089 266 -AHTCTGDGTAMISRAGLPNEDLEFVQFHPTGIYG---A---GCLITEGCRGEGGYLINSEGERFMERYAPVAK------ 332 (661)
Q Consensus 266 -~~~~tGdG~~~a~~aGa~l~~~ef~q~~p~~~~~---~---g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~------ 332 (661)
++.+||||++||+++||.+.|||| ||||+.++. + ++|++| ++++|.+|+|||++|+|...
T Consensus 250 ~~~~~tGdG~~mA~~aGA~l~~me~-QfhPt~~~~~~~p~~~~~Lise------~ilvn~~GeRFm~~~~p~~~~~~~~~ 322 (662)
T 3gyx_A 250 YPVWNAGSTYTMCAQVGAEMTMMEN-RFVPARFKDGYGPVGAWFLLFK------AKATNCKGEDYCATNRAMLKPYEERG 322 (662)
T ss_dssp SCTTCBSHHHHHHHTTTCEEECTTC-CBCCEEETTTCCCCHHHHHHHC------CCEECTTSCCHHHHTGGGGHHHHTTT
T ss_pred CCCCCcchHHHHHHHhCCcccCCCe-eEeccccccCCCCCCceEEEee------eEEECCCCCEecCCcCchhhcccccc
Confidence 789999999999999999999998 999998852 2 256655 68999999999999998764
Q ss_pred ----cccchhHhhhhHHHHHHhcCCCCCCCCcEEEeCCC--------CChHHHH-----------hHhhhHHHHHHHHcC
Q psy15089 333 ----DLASRDVVSRSMTIEIREGRGVGPDKDHVYLQLHH--------LPPEDLH-----------QRLPGISETAMIFAG 389 (661)
Q Consensus 333 ----~l~~rd~~~~~i~~e~~~g~g~~~~~~~v~~d~~~--------~~~~~l~-----------~~~~~~~~~~~~~~g 389 (661)
+|+|||+++++|..|+++|+| .||||+++ ++++.++ +++|.+...+. ..|
T Consensus 323 y~~~eLapRDvvsrai~~e~~~G~g------~v~LD~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~i~~~~~-~~g 395 (662)
T 3gyx_A 323 YAKGHVIPTCLRNHMMLREMREGRG------PIYMDTKTALQTSFATMSPAQQKHLEAEAWEDFLDMCVGQANLWA-ATN 395 (662)
T ss_dssp SSTTTCCCHHHHTHHHHHHHHTTCC------CCEECHHHHHHHHTTTSCHHHHHHHHHHHHHHHHTTCHHHHHHHH-HTT
T ss_pred ccccccCchHHHHHHHHHHHHcCCC------cEEEEccCcchhcccccCHHHHHhhhhhhHHHHHHhChHHHHHHH-HcC
Confidence 799999999999999999876 39999987 6666542 34566666654 479
Q ss_pred CCCCCCCeeeeccccccccC------cccCCCCeEEeec-----------CCCCccccceeeeccccccCCCCCCccchh
Q psy15089 390 VDVTREPIPVLPTVHYNMGG------IPTNYKGQVLTHV-----------NGQDKIIHGLYAAGEASCSSVHGANRLGAN 452 (661)
Q Consensus 390 id~~~~~i~v~p~~~~~~GG------i~vd~~~~vl~~d-----------~~~~T~ipGLyAaGe~a~~g~hGanrlgg~ 452 (661)
+||.++||||.|++||+||| |+||.+++|+..+ .+.+|+||||||||||+|.++||+ ++|
T Consensus 396 iD~~~~pipV~P~~Hy~mGG~~~~~Gi~vd~~~~~~~~~~~~~~~~~~~~~~~~t~v~gl~a~Ge~~~~~~hg~---~~~ 472 (662)
T 3gyx_A 396 CAPEERGSEIMPTEPYLLGSHSGCCGIWASGPDEAWVPEDYKVRAANGKVYNRMTTVEGLWTCADGVGASGHKF---SSG 472 (662)
T ss_dssp CCTTTCCEEEEECCCBBCSSSSCCCEECCCCCCCTTSCGGGCCCCTTSCCCTTBCSSBTEECCSSSBCSCCCCH---HHH
T ss_pred CCcccCceeeeeccceecccccccCceeecCccccccccccccccccccccCCCCccCCeEeCccccccccCcc---HhH
Confidence 99999999999999999996 9999777654322 356799999999999999999997 788
Q ss_pred hhhhHHHHHHHHHHHHHHhcCCCCCCCcccccchhhhHhhhhHhhhc--------------CCCCCHHHHHHHHHHHhcc
Q psy15089 453 SLLDLVVFGRACAKTIAEENKPGAPIKPFAANAGESSVANLDWVRHA--------------KGDITTADLRLTMQKTMQT 518 (661)
Q Consensus 453 ~l~~a~v~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~m~~ 518 (661)
||+++.++|+.|++.+..... .........++..+++..++.. ++..++.+++++||++||+
T Consensus 473 sl~~g~~ag~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~~M~~ 548 (662)
T 3gyx_A 473 SHAEGRIVGKQMVRWYLDHKD----FKPEFVETAEELKTLIYRPYYNYEKGKGASTCPVVNPEYISPKNFMMRLIKCTDE 548 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHTCS----CCCCCSSCHHHHHHHHTHHHHHHHHHGGGCSSSSSCSSSBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC----CCCCCHHHHHHHHHHHHHHHhhhhhccccccccccCCCCcCHHHHHHHHHHHHHH
Confidence 888765555555555543211 1112222334444444433322 3467899999999999999
Q ss_pred cce----eeeCHH-HHHHHHHHHHHHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCC--Ccccc
Q psy15089 519 YAA----VFRTQE-TLQEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESR--GAHAR 591 (661)
Q Consensus 519 ~~g----~~R~~~-~L~~al~~l~~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESR--G~H~R 591 (661)
|+| ++|+++ +|++|+++|++|++++.++.+.|. ++|++++|++|||++|+++++|||+||||| |+|||
T Consensus 549 ~~g~~~~v~R~~~~~L~~al~~l~~l~~~~~~~~~~~~-----~~l~~~~E~~~~l~~a~~~~~~al~R~ESR~~G~H~R 623 (662)
T 3gyx_A 549 YGGGVGTYYNTSKALLDTGFWLMEMLEEDSLKLAARDL-----HELLRCWENYHRLWTVRLHMQHIAFREESRYPGFYYR 623 (662)
T ss_dssp HTTCTTTTTEECHHHHHHHHHHHHHHHHHGGGBCCSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEE
T ss_pred hcCCCccEEEcCHHHHHHHHHHHHHHHHHHhcCcCCCh-----HHHHHHHHHHhHHHHHHHHHHHHHhCcccccccceec
Confidence 999 999997 999999999999999988888773 899999999999999999999999999999 99999
Q ss_pred ccCCCCccccccCCCCCCCCCCCccccccceEEEEeeCCCCceEEEeecccc
Q psy15089 592 EDFKVRVDELDYAKPLEGQVPKPIEEHWRKHTLTDVDVNTGKVKIYYRPVID 643 (661)
Q Consensus 592 ~D~P~~dd~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~v~~ 643 (661)
+|||++||+ ||+||+++++++++|+++++|+||+.
T Consensus 624 ~D~P~~dd~-----------------~w~~~~~~~~~~~~g~~~~~~~p~~~ 658 (662)
T 3gyx_A 624 ADFLGLDDS-----------------KWKCFVNSKYDPAKKETKIFKKPYYQ 658 (662)
T ss_dssp TTSCSCCTT-----------------TCCSEEEEEEETTTTEEEEEEECCEE
T ss_pred ccCCccCcc-----------------ccceEEEEEEcCCCCceEEEEeehhc
Confidence 999999999 99999999998778999999999974
No 6
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=100.00 E-value=6.9e-90 Score=770.16 Aligned_cols=512 Identities=31% Similarity=0.468 Sum_probs=402.8
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
+.++||||||||+|||+||+.|++ |++|+||||....+++|.+++||+++..+ ..|+++.|+.|+++.+.++++++.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~--~~ds~~~~~~d~l~~g~g~~d~~~ 82 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFD--ETDSIDSHVEDTLIAGAGICDRHA 82 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CC--SHHHHHHHHHHHHHHTTTCCCHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecC--CCCCHHHHHHHHHHhhcccCCHHH
Confidence 356999999999999999999999 99999999998888889999999987765 457788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCcccCC----CCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHh-CCc
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSRTT----DGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLR-YDC 210 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~~~----~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~-~gv 210 (661)
++.+++.+++.++||.++|++|.+.. +|.+....+++++. +|.++..+.+|..++..|.+++++ .|+
T Consensus 83 v~~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~--------~r~~~~~d~~g~~l~~~L~~~~~~~~gv 154 (540)
T 1chu_A 83 VEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSH--------RRILHAADATGREVETTLVSKALNHPNI 154 (540)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC----------------------------------------------CCCHHHHHHCTTE
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCcccCcCCcccccccccccc--------CeEEEeCCCCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999998776 66665566666653 456666677888999999999988 699
Q ss_pred EEEEeEEEEEEEE-eCC------EEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCc
Q psy15089 211 NYFVEYFALDLII-ENG------ECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLP 283 (661)
Q Consensus 211 ~i~~~~~v~~l~~-~~g------~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~ 283 (661)
++++++.|++|+. +++ +|.||.+.+..+|+...|.||.||+||||++.+|..+++++.+||||++||+++||.
T Consensus 155 ~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~~~tGdG~~ma~~aGa~ 234 (540)
T 1chu_A 155 RVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCR 234 (540)
T ss_dssp EEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGSSSBSCGGGCSCHHHHHHHHTTCC
T ss_pred EEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccccCCCcCCCCCchHHHHHHHHcCCC
Confidence 9999999999998 556 899999987668887889999999999999999998999999999999999999999
Q ss_pred cCCCcccccccccccC---CCceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHhcCCCCCCCCc
Q psy15089 284 NEDLEFVQFHPTGIYG---AGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGPDKDH 360 (661)
Q Consensus 284 l~~~ef~q~~p~~~~~---~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~g~g~~~~~~~ 360 (661)
+.+|||+||||+.++. .+++++++++++|++++|.+|+|||++|+|. .++.|||+++++|..++.++. .+.
T Consensus 235 l~~~e~~q~hpt~~~~~~~~~~l~~e~~rg~g~~lvn~~G~RF~~~~~~~-~el~~rd~v~~ai~~~~~~~~-----~~~ 308 (540)
T 1chu_A 235 VANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDER-GELAPRDIVARAIDHEMKRLG-----ADC 308 (540)
T ss_dssp EECTTCEEEEEEEECSTTCTTCBCCHHHHHTTCEEECTTSCBCGGGTCTT-GGGSCHHHHHHHHHHHHHHHT-----CSC
T ss_pred CcChHHHhhcCeeecCCCCCcceeehhhcCCceEEECCCCCCCcccCCcc-cccCcHHHHHHHHHHHHHhcC-----Cce
Confidence 9999999999998764 3578899999999999999999999999985 589999999999999987652 235
Q ss_pred EEEeCCCCChHHHHhHhhhHHHHHHHHcCCCCCCCCeeeeccccccccCcccCCCCeEEeecCCCCccccceeeeccccc
Q psy15089 361 VYLQLHHLPPEDLHQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASC 440 (661)
Q Consensus 361 v~~d~~~~~~~~l~~~~~~~~~~~~~~~gid~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~ 440 (661)
+|+|+++++++.+..++|++.+.+.. .|+||.++|+||.|++||+||||+||.+++ |+||||||||||+|
T Consensus 309 v~ld~~~~~~~~~~~~~~~i~~~~~~-~Gid~~~~~i~v~p~~h~t~GGi~vd~~~~---------t~I~GLyAaGE~a~ 378 (540)
T 1chu_A 309 MFLDISHKPADFIRQHFPMIYEKLLG-LGIDLTQEPVPIVPAAHYTCGGVMVDDHGR---------TDVEGLYAIGEVSY 378 (540)
T ss_dssp EEEECCSSCSHHHHHHCHHHHHHHHT-TTCCTTTSCEEEEEEEEEESCEEECCTTCB---------CSSBTEEECGGGEE
T ss_pred EEEecccCCHHHHHHhhhhHHHHHHH-hCcCCCCCCeEeehHHheecCcEEECCCCC---------CccCCEEecccccc
Confidence 99999999999999999999998875 699999999999999999999999999987 89999999999998
Q ss_pred cCCCCCCccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCcccccchhhhHhhhhHhhhcCCCCCHHHHHHHHHHHhcccc
Q psy15089 441 SSVHGANRLGANSLLDLVVFGRACAKTIAEENKPGAPIKPFAANAGESSVANLDWVRHAKGDITTADLRLTMQKTMQTYA 520 (661)
Q Consensus 441 ~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~ 520 (661)
+|+||+||||||||++|+|||++||++|+++.........+.. +.+. .+ ...+....+.+++++||++||+|+
T Consensus 379 ~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~-~~~~---~~---~~~~~~~~~~~~~~~l~~~m~~~~ 451 (540)
T 1chu_A 379 TGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHDISTLPP-WDES---RV---ENPDERVVIQHNWHELRLFMWDYV 451 (540)
T ss_dssp CSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC---CCCCCBCC-CCCC---CB---CCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccCCCcCcchhHHHHHHHHHHHHHHHHHhcccccccccchh-hhhh---cc---cCcccccchHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999988643111011110 0000 00 000011235678899999999999
Q ss_pred eeeeCHHHHHHHHHHHHHHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCCCccccccCCCCccc
Q psy15089 521 AVFRTQETLQEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRGAHAREDFKVRVDE 600 (661)
Q Consensus 521 g~~R~~~~L~~al~~l~~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESRG~H~R~D~P~~dd~ 600 (661)
||+|++++|++|+++|++|++++....... ....+++|++||+++|+++++|||+|+||||+|||+|||++||+
T Consensus 452 gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~------~~~~~~~e~~~~~~~a~~~~~~al~R~ESRG~h~r~D~p~~~~~ 525 (540)
T 1chu_A 452 GIVRTTKRLERALRRITMLQQEIDEYYAHF------RVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTH 525 (540)
T ss_dssp SSSBCHHHHHHHHHHHHHHHHHHHHHHTTB------CCCHHHHHHHHHHHHHHHHHHHHHHCCSCBTTBCBTTCCSCCSS
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHhhcc------cccHHHHHHHHHHHHHHHHHHHHHhCCCcceeeecccCCCcChh
Confidence 999999999999999999988764322110 11135789999999999999999999999999999999999986
Q ss_pred cccCCCCCCCCCCCccccccceEEE
Q psy15089 601 LDYAKPLEGQVPKPIEEHWRKHTLT 625 (661)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~w~~~~~~ 625 (661)
|+||++.
T Consensus 526 ------------------~~~~~~~ 532 (540)
T 1chu_A 526 ------------------SGPSILS 532 (540)
T ss_dssp ------------------CCCCEEC
T ss_pred ------------------hhceEEc
Confidence 9999875
No 7
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=100.00 E-value=7.3e-79 Score=694.73 Aligned_cols=535 Identities=21% Similarity=0.265 Sum_probs=410.8
Q ss_pred CcccccccEEEECCcHHHHHHHHHhH---H-CCCcEEEEEecCCCCCCcccccCceEEc--cCCC----CCCCHHHHHHH
Q psy15089 53 PVVDHQFDAVVVGAGGAGLRAAFGLV---A-EGFKTAVITKLFPTRSHTVAAQGGINAA--LGNM----EEDDWHWHMYD 122 (661)
Q Consensus 53 ~~~~~~~DVlVVGgG~AGl~AA~~aa---~-~G~~V~liek~~~~~~~s~~a~Gg~~~~--~~~~----~~d~~~~~~~d 122 (661)
+.++.++||||||||+|||+||+.|+ + .|++|+||||....++++ .++|+.... ++.. ..|+++.|+.+
T Consensus 17 ~~~~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~-~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~ 95 (643)
T 1jnr_A 17 PTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGA-VAQGLSAINTYIDLTGRSERQNTLEDYVRY 95 (643)
T ss_dssp CEEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCST-TTTCEEEESCCCCSSSSBSCCCCHHHHHHH
T ss_pred ceeeccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcc-eecccccccchhhHHHhcCCCCCHHHHHHH
Confidence 34567899999999999999999999 6 899999999987655543 455654433 2211 15788889999
Q ss_pred HHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHH
Q psy15089 123 TVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLY 202 (661)
Q Consensus 123 ~~~~g~~l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~ 202 (661)
+...+.+++++++++.+++++++.++||.++|++|.+.++|.+... ++. ... ..|..+...|.
T Consensus 96 ~~~~g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~--~~~----------~~~-----~~g~~~~~~l~ 158 (643)
T 1jnr_A 96 VTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVRE--GQW----------QIM-----IHGESYKPIIA 158 (643)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBS--SSS----------CEE-----EEETTHHHHHH
T ss_pred HHHHhcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCC--Ccc----------ccC-----CCcHHHHHHHH
Confidence 9988999999999999999999999999999999987766654221 100 000 12345677788
Q ss_pred HHHHhC-Cc-EEEEeEEEEEEEEeCC---EEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCC---------CCC
Q psy15089 203 GQSLRY-DC-NYFVEYFALDLIIENG---ECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTS---------AHT 268 (661)
Q Consensus 203 ~~a~~~-gv-~i~~~~~v~~l~~~~g---~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~---------~~~ 268 (661)
+.+++. || +++.++.|++|+.+++ +|+||.+++..+|+...|+||.||+||||++..|.++++ ++.
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y~~~~~~~~~~~~~~~~~ 238 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTWYAIF 238 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCSSCTT
T ss_pred HHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccccCcccccccccccCCCC
Confidence 888877 99 9999999999999877 999999888778887789999999999999999876543 788
Q ss_pred CCChHHHHHHHcCCccCCCcccccccccccCCCceecccccCCCcEEEcCCCCcccccccccccccc--------chhHh
Q psy15089 269 CTGDGTAMISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLA--------SRDVV 340 (661)
Q Consensus 269 ~tGdG~~~a~~aGa~l~~~ef~q~~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~--------~rd~~ 340 (661)
+||||++||+++||.+.+||+ ||||+.+..............|++++|.+|+|||++|.|...+++ +|+++
T Consensus 239 ~tGdG~~mA~~aGa~l~~me~-qf~pt~~~~~~~~~~~~~l~~g~ilvn~~G~RF~~e~~~~~~~~~~~~~~~~~~rd~~ 317 (643)
T 1jnr_A 239 DTGSGYYMGLKAGAMLTQFEH-RFIPFRFKDGYGPVGAWFLFFKCKAKNAYGEEYIKTRAAELEKYKPYGAAQPIPTPLR 317 (643)
T ss_dssp CBSHHHHHHHHHTCCEESTTC-CBCCEEETTTCCCCHHHHHTSCCCEECTTSCCHHHHTSGGGGGGTTGGGSSSCCHHHH
T ss_pred CccHHHHHHHHhCCccCCchh-eeecccccCCCCCcccceecccceEECCCCCchhhccchhhhhHhhhcccCCCCchhh
Confidence 999999999999999999998 999997653210000111235789999999999999988653333 58899
Q ss_pred hhhHHHHHHhcCCCCCCCCcEEEeCC---------------CCChHHHHhHhh---hHHHHHHHHcCCCCCCCCeeeecc
Q psy15089 341 SRSMTIEIREGRGVGPDKDHVYLQLH---------------HLPPEDLHQRLP---GISETAMIFAGVDVTREPIPVLPT 402 (661)
Q Consensus 341 ~~~i~~e~~~g~g~~~~~~~v~~d~~---------------~~~~~~l~~~~~---~~~~~~~~~~gid~~~~~i~v~p~ 402 (661)
+++|..++.++++ .+|+|.. +++++.++..++ ..+..+. ..|+|+.++|+||.|+
T Consensus 318 ~~~i~~e~~~g~g------~~~l~~~~~~~ela~~~gld~~~l~~~~~~~~l~~~~~~~~~~~-~~G~D~~~~~ipv~p~ 390 (643)
T 1jnr_A 318 NHQVMLEIMDGNQ------PIYMHTEEALAELAGGDKKKLKHIYEEAFEDFLDMTVSQALLWA-CQNIDPQEQPSEAAPA 390 (643)
T ss_dssp HHHHHHHHHTTCC------CEEECHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHHHHHH-HTTCCTTTSCEEEEEC
T ss_pred HHHHHHHHhcCCC------CceeeecccHHHHHHHhccChhhhhHHHHHHHHHHhHHHHHHHH-hcCCCcccCcccccCC
Confidence 9999999988764 2787643 333333333333 2222222 2799999999999999
Q ss_pred cccccc------CcccCCCCeEEeec--------CCCCccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHH
Q psy15089 403 VHYNMG------GIPTNYKGQVLTHV--------NGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTI 468 (661)
Q Consensus 403 ~~~~~G------Gi~vd~~~~vl~~d--------~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~a 468 (661)
+||+|| ||.||.+++|++.+ .+++|+||||||||||+|++ .||++||||++ |++||++|
T Consensus 391 ~hy~~G~~~t~gGi~~d~~~~vl~~~~~~~v~~~~~~~t~I~GLyAaGe~a~~~---~~r~~~~sl~~----G~~ag~~a 463 (643)
T 1jnr_A 391 EPYIMGSHSGEAGFWVCGPEDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGAN---PHKFSSGSFTE----GRIAAKAA 463 (643)
T ss_dssp CCBBCSSSSCCCEECCCCCTTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSC---CCCHHHHHHHH----HHHHHHHH
T ss_pred CCccccccccccceeecCccccccccccccccccccCCceeCCEEeeecccccc---ccccchhHHHH----HHHHHHHH
Confidence 999999 89999999987764 34569999999999998765 36898887765 55555555
Q ss_pred HHhcCCCCCCCcccccchhh----hHhhhhHhhh----------cCCCCCHHHHHHHHHHHhcccce----eeeCHH-HH
Q psy15089 469 AEENKPGAPIKPFAANAGES----SVANLDWVRH----------AKGDITTADLRLTMQKTMQTYAA----VFRTQE-TL 529 (661)
Q Consensus 469 a~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----------~~~~~~~~~~~~~l~~~m~~~~g----~~R~~~-~L 529 (661)
++++......+.+.....+. ...++..+.. ....+++.+++.+||++||+|+| ++|+++ +|
T Consensus 464 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~M~~~~g~i~~~~R~~~~~L 543 (643)
T 1jnr_A 464 VRFILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKDLSTADDVNPEYILPWQGLVRLQKIMDEYAAGIATIYKTNEKML 543 (643)
T ss_dssp HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSSTTCCTTCBCHHHHHHHHHHHHHHHTTCGGGTTEECHHHH
T ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHhHHHHhhhccccccccccCcCCCCHHHHHHHHHHHHHHHhCCCcceeecCHHHH
Confidence 55542111111121111111 1122222111 12346789999999999999999 568765 99
Q ss_pred HHHHHHHHHHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCC--CccccccCCCCccccccCCCC
Q psy15089 530 QEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESR--GAHAREDFKVRVDELDYAKPL 607 (661)
Q Consensus 530 ~~al~~l~~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESR--G~H~R~D~P~~dd~~~~~~~~ 607 (661)
++|+++|+.|+++++.+.+.|. ++|++++|++||+++|+++++|||+|+||| |+|||+|||++||+
T Consensus 544 ~~al~~l~~l~~~~~~~~~~~~-----~~l~~~~e~~n~l~~a~~i~~aAl~R~ESR~~G~H~R~D~P~~d~~------- 611 (643)
T 1jnr_A 544 QRALELLAFLKEDLEKLAARDL-----HELMRAWELVHRVWTAEAHVRHMLFRKETRWPGYYYRTDYPELNDE------- 611 (643)
T ss_dssp HHHHHHHHHHHHHHTTBCCSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSTTTCEETTSCSCCTT-------
T ss_pred HHHHHHHHHHHHHHHhccCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHhccccccCCceecccCCccChH-------
Confidence 9999999999998887777663 799999999999999999999999999999 99999999999998
Q ss_pred CCCCCCCccccccceEEEEeeCCCCceEEEeeccc
Q psy15089 608 EGQVPKPIEEHWRKHTLTDVDVNTGKVKIYYRPVI 642 (661)
Q Consensus 608 ~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~v~ 642 (661)
+|++|++++++.++|+++++|+||.
T Consensus 612 ----------~~~~~~~~~~~~~~~~~~~~~~pv~ 636 (643)
T 1jnr_A 612 ----------EWKCFVCSKYDAEKDEWTFEKVPYV 636 (643)
T ss_dssp ----------TCCEEEEEEEETTTTEEEEEEEECC
T ss_pred ----------HHHHHHhhhcccCCCceEEEEeecc
Confidence 9999999998655799999999996
No 8
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.2e-76 Score=651.65 Aligned_cols=468 Identities=31% Similarity=0.459 Sum_probs=401.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHHHH
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHYM 139 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~~~ 139 (661)
||||||||+||++||+.|++.|++|+||||. ..++++.+++||+++.++ ..++++.|+.++++.+.++++++.++.+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~--~~d~~~~~~~d~l~~g~~~~d~~~v~~~ 77 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVG--SDDSPELHAQDTIRVGDGLCDVKTVNYV 77 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCS--TTCCHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCC--CCCCHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 8999999999999999999999999999999 778888999999988765 4688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEEEE
Q psy15089 140 TREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFAL 219 (661)
Q Consensus 140 ~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v~ 219 (661)
++++++.+++|.++|++|++. ...++++++ +|.++..+.+|..+.+.|.+++++.|++++.++.|
T Consensus 78 ~~~~~~~i~~l~~~Gv~~~~~------~~~~~g~~~--------~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v- 142 (472)
T 2e5v_A 78 TSEAKNVIETFESWGFEFEED------LRLEGGHTK--------RRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV- 142 (472)
T ss_dssp HHHHHHHHHHHHHTTCCCCSS------CBCCTTCSS--------CCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-
T ss_pred HHHHHHHHHHHHHcCCCCCcc------cccccCcCc--------CcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-
Confidence 999999999999999999753 223455443 46666677889999999999998889999999999
Q ss_pred EEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCccCCCcccccccccccC
Q psy15089 220 DLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLEFVQFHPTGIYG 299 (661)
Q Consensus 220 ~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~l~~~ef~q~~p~~~~~ 299 (661)
+|+.++++|.|+.+.+ .+| .+.||.||+|||+++..|..+++++.++|||+.|++++|+.+.+|||+|+||+.+..
T Consensus 143 ~l~~~~~~v~Gv~v~~-~~g---~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ 218 (472)
T 2e5v_A 143 EIRVKDGKVTGFVTEK-RGL---VEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSL 218 (472)
T ss_dssp EEEEETTEEEEEEETT-TEE---ECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECG
T ss_pred EEEEeCCEEEEEEEEe-CCC---eEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEcc
Confidence 9999999999987643 333 367999999999999999888888899999999999999999999999999987542
Q ss_pred C--CceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHhcCCCCCCCCcEEEeCCCCChHHHHhHh
Q psy15089 300 A--GCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGPDKDHVYLQLHHLPPEDLHQRL 377 (661)
Q Consensus 300 ~--g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~g~g~~~~~~~v~~d~~~~~~~~l~~~~ 377 (661)
. ++++++++++.|+.++|.+|+|||++|+|.. ++.+|+++++++..++.++. .+|+|.++++. +.+++
T Consensus 219 ggg~~~~ae~~~~~G~~~v~~~g~rf~~~~~~~~-el~~rd~v~~~i~~~~~~~~-------~v~ld~~~~~~--~~~~~ 288 (472)
T 2e5v_A 219 DGEVFLLTETLRGEGAQIINENGERFLFNYDKRG-ELAPRDILSRAIYIEMLKGH-------KVFIDLSKIED--FERKF 288 (472)
T ss_dssp GGCCEECCTHHHHTTCEEEETTCCCGGGGTCTTG-GGSCHHHHHHHHHHHHHHTC-------CEEEECTTCTT--HHHHC
T ss_pred CCCceeeehhhcCCceEEECCCCCCCCccCCccc-CcCchhHHHHHHHHHHHhCC-------cEEEeccchHH--HHHHh
Confidence 2 5678888899999999999999999998875 89999999999999987653 28999988764 66778
Q ss_pred hhHHHHHHHHcCCCCCCCCeeeeccccccccCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhH
Q psy15089 378 PGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDL 457 (661)
Q Consensus 378 ~~~~~~~~~~~gid~~~~~i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a 457 (661)
|.+...+.. .|+||. +++|+.|..||++|||.||.++| |+||||||||||++.++||+|||+||++.+|
T Consensus 289 ~~~~~~~~~-~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~---------t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~ 357 (472)
T 2e5v_A 289 PVVAKYLAR-HGHNYK-VKIPIFPAAHFVDGGIRVNIRGE---------SNIVNLYAIGEVSDSGLHGANRLASNSLLEG 357 (472)
T ss_dssp HHHHHHHHH-TTCCTT-SCEECEEEEEEESCEEECCTTCB---------CSSBTEEECGGGEECSSSTTSCCTTHHHHHH
T ss_pred HHHHHHHHH-hCcCcc-cceEeehhhceeCCCeEECCCCc---------cccCCEEecchhcccccCCCCCCCcccHHHH
Confidence 876665553 699999 99999999999999999999887 9999999999998779999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcccccchhhhHhhhhHhhhcCCCCCHHHHHHHHHHHhcccceeeeCHHHHHHHHHHHH
Q psy15089 458 VVFGRACAKTIAEENKPGAPIKPFAANAGESSVANLDWVRHAKGDITTADLRLTMQKTMQTYAAVFRTQETLQEGCNKMA 537 (661)
Q Consensus 458 ~v~G~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~R~~~~L~~al~~l~ 537 (661)
++||++||++|+++.... ...+. .+ ....+..++.+++.+||++||+++||+|++++|++++++|+
T Consensus 358 ~v~G~~a~~~~a~~~~~~--~~~~~-~~-----------~~~~~~~~~~~~~~~l~~~m~~~~g~~r~~~~l~~~~~~~~ 423 (472)
T 2e5v_A 358 LVFGINLPRYVDSSWEGI--STDDG-IV-----------HSVRISGNKTLSLKEIRRINWENVGIIRNEEKLVKAINTYS 423 (472)
T ss_dssp HHHHHHGGGTTTSCCCCC--CCTTE-EE-----------EEECCCCCCCCCHHHHHHHHHHHSSSSBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhcccc--hhhhh-hc-----------ccccccCChHHHHHHHHHHHHHhcCcccCHHHHHHHHHHHH
Confidence 999999999987653210 00000 00 00123445667889999999999999999999999999997
Q ss_pred HHHHHHhccccccCccccchhHHHHHHHHhHHHHHHHHHHHHHhcccCCCccccccCCCCccccccCCCCCCCCCCCccc
Q psy15089 538 ALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRGAHAREDFKVRVDELDYAKPLEGQVPKPIEE 617 (661)
Q Consensus 538 ~l~~~~~~~~~~d~~~~~~~~l~~~~e~~~~l~~a~~~~~aal~R~ESRG~H~R~D~P~~dd~~~~~~~~~~~~~~~~~~ 617 (661)
.|++ +|+++|+++++|||+|+||||+|||+|||++||+
T Consensus 424 ~~~~-------------------------~~~~~a~~~~~~al~R~esrG~h~r~d~p~~~~~----------------- 461 (472)
T 2e5v_A 424 SSTQ-------------------------NEAIISYLTALAAEIRKESRGNHFREDYPYKDPN----------------- 461 (472)
T ss_dssp TCCC-------------------------HHHHHHHHHHHHHHHCCSCBTTBCBTTBCSCCGG-----------------
T ss_pred HHHH-------------------------HHHHHHHHHHHHHHhccccccceecccCCCcChh-----------------
Confidence 6531 2899999999999999999999999999999986
Q ss_pred cccceEEEEe
Q psy15089 618 HWRKHTLTDV 627 (661)
Q Consensus 618 ~w~~~~~~~~ 627 (661)
|++|++.+.
T Consensus 462 -~~~~~~~~~ 470 (472)
T 2e5v_A 462 -WEKRIYFKL 470 (472)
T ss_dssp -GCSEEEEEE
T ss_pred -hhceEEEEe
Confidence 899987653
No 9
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=100.00 E-value=2e-53 Score=480.73 Aligned_cols=379 Identities=28% Similarity=0.480 Sum_probs=311.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCC-----CCCCHHHHHHHHHhccCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNM-----EEDDWHWHMYDTVKGSDWLG 131 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~-----~~d~~~~~~~d~~~~g~~l~ 131 (661)
.++||||||||+||++||+.|+++|++|+||||....++.+..++||++...... ..++++.++.++++.+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 3689999999999999999999999999999999888888888888887543211 24778888999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccC--CcHHHHHHHHHHHHHhCC
Q psy15089 132 DQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVAD--RTGHSLLHTLYGQSLRYD 209 (661)
Q Consensus 132 ~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~--~~g~~l~~~L~~~a~~~g 209 (661)
++++++.+++.+.+.++||.++|++|... ..++++. .+|.+...+ .++..+...|.+.+++.|
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~g~~--------~~r~~~~~~g~~~g~~l~~~L~~~~~~~g 269 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDV-------GMMGGAS--------VNRAHRPTGGAGVGAHVVQVLYDNAVKRN 269 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEE-------ECCTTCS--------SCCEEESTTTCCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccC-------cccCCcC--------CCeeEecCCCCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999998531 1123332 234444433 567899999999999999
Q ss_pred cEEEEeEEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc------CC------CCCCCCCCCChHHHH
Q psy15089 210 CNYFVEYFALDLIIEN-GECKGVIALCLEDGSIHRFNANNTVLATGGYGRA------YF------SCTSAHTCTGDGTAM 276 (661)
Q Consensus 210 v~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~------~~------~~~~~~~~tGdG~~~ 276 (661)
++|++++.|++|+.++ ++|+||.+.+ .+|+...|.||.||+||||++.+ |. .+++++.++|||+.|
T Consensus 270 v~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~n~~~~~~~~p~~~~~~~~~~~~~tGdg~~~ 348 (571)
T 1y0p_A 270 IDLRMNTRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDV 348 (571)
T ss_dssp CEEESSEEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBCSCTTCSSHHHHH
T ss_pred CEEEeCCEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCcccCHHHHHHhCccccCCcccCCCCCchHHHHH
Confidence 9999999999999987 8999998875 47877789999999999999862 33 456788999999999
Q ss_pred HHHcCCccCCCcccccccccccCCCceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHhcCCCCC
Q psy15089 277 ISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGP 356 (661)
Q Consensus 277 a~~aGa~l~~~ef~q~~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~g~g~~~ 356 (661)
|+++|+.+.+|+|+|+||+.+...+.+.++.++++|+++||.+|+||++| +.+|+++++++..+.. +
T Consensus 349 a~~~Ga~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~i~vn~~G~RF~~E-------~~~~~~~~~a~~~~~~-~----- 415 (571)
T 1y0p_A 349 AENAGGALKDMQYIQAHPTLSVKGGVMVTEAVRGNGAILVNREGKRFVNE-------ITTRDKASAAILAQTG-K----- 415 (571)
T ss_dssp HHHTTCCEECTTCEEEEEEEETTTCSBCCTHHHHTTCEEECTTSCCCSCT-------TSCHHHHHHHHHTSGG-G-----
T ss_pred HHHcCCcEeCCcceeecCcccCCCCceeeecccCCceEEECCCCCCCcCC-------CCcHhHHHHHHHhCcC-C-----
Confidence 99999999999999999998776666667777888999999999999984 4567777766653210 0
Q ss_pred CCCcEEE--e------------------------------CCCCChHHHHhHhhhHHHHHHHHcCCCC-----------C
Q psy15089 357 DKDHVYL--Q------------------------------LHHLPPEDLHQRLPGISETAMIFAGVDV-----------T 393 (661)
Q Consensus 357 ~~~~v~~--d------------------------------~~~~~~~~l~~~~~~~~~~~~~~~gid~-----------~ 393 (661)
..|+ | .-+++++.|.+++..|++.+. .|.|+ .
T Consensus 416 ---~~~~i~d~~~~~~~~~~~~~~~~g~~~~~~tl~ela~~~gi~~~~l~~tv~~yn~~~~--~g~D~~f~k~~~~~~i~ 490 (571)
T 1y0p_A 416 ---SAYLIFDDSVRKSLSKIDKYIGLGVAPTADSLVKLGKMEGIDGKALTETVARYNSLVS--SGKDTDFERPNLPRALN 490 (571)
T ss_dssp ---CEEEEEEHHHHHHCTTHHHHHHHTCCCEESSHHHHHHHHTSCHHHHHHHHHHHHHHHH--HTCCTTTCCSCCCCCSC
T ss_pred ---CEEEEEChHHHhhhhhHHHHhhCCeEEEeCCHHHHHHHhCcCHHHHHHHHHHHHHHHH--cCCCcccCCCCCCCcCC
Confidence 1221 1 124677778888888888765 46664 2
Q ss_pred CCC---eeeeccccccccCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHH
Q psy15089 394 REP---IPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAE 470 (661)
Q Consensus 394 ~~~---i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~ 470 (661)
+.| +++.|..|++||||+||.++||++.+ .|+|||||||||++ +|+||+|||+|++|++|+|||++||++|++
T Consensus 491 ~~Pfya~~~~p~~~~t~GGl~id~~~~vl~~~---g~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~ 566 (571)
T 1y0p_A 491 EGNYYAIEVTPGVHHTMGGVMIDTKAEVMNAK---KQVIPGLYGAGEVT-GGVHGANRLGGNAISDIITFGRLAGEEAAK 566 (571)
T ss_dssp SSCEEEEEEEEEEEEECCEEEBCTTCEEECTT---SCEEEEEEECSTTE-ESSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeeeeeEecCCeEECCCceEECCC---CCCcCCcEeceEcC-CCCcCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 345 89999999999999999999999877 78999999999987 589999999999999999999999999998
Q ss_pred hcC
Q psy15089 471 ENK 473 (661)
Q Consensus 471 ~~~ 473 (661)
+++
T Consensus 567 ~~~ 569 (571)
T 1y0p_A 567 YSK 569 (571)
T ss_dssp HC-
T ss_pred Hhh
Confidence 763
No 10
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=100.00 E-value=4.6e-53 Score=476.76 Aligned_cols=379 Identities=30% Similarity=0.503 Sum_probs=313.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCC-----CCCCHHHHHHHHHhccCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNM-----EEDDWHWHMYDTVKGSDWLG 131 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~-----~~d~~~~~~~d~~~~g~~l~ 131 (661)
.++||+|||+|+||++||+.|++.|.+|+|+||....++.+..++|+++...... ..++++.++.++++.+.+.+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999999888888888889887654322 24777889999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccC--CcHHHHHHHHHHHHHhCC
Q psy15089 132 DQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVAD--RTGHSLLHTLYGQSLRYD 209 (661)
Q Consensus 132 ~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~--~~g~~l~~~L~~~a~~~g 209 (661)
++++++.+++.+.+.++||.++|++|... ..++|+.+ +|.+...+ .++..++..|.+.+++.|
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~-------~~~gg~~~--------~r~~~~~~~~~~g~~l~~~L~~~~~~~g 269 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDV-------GRMGGASV--------NRSHRPTGGAGVGAHVAQVLWDNAVKRG 269 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEE-------ECCTTCSS--------CCEEESTTTCCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccc-------cccCCCcC--------CeeEecCCCCCCHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999998542 12234332 44444333 357889999999999999
Q ss_pred cEEEEeEEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc------C------CCCCCCCCCCChHHHH
Q psy15089 210 CNYFVEYFALDLIIEN-GECKGVIALCLEDGSIHRFNANNTVLATGGYGRA------Y------FSCTSAHTCTGDGTAM 276 (661)
Q Consensus 210 v~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~------~------~~~~~~~~~tGdG~~~ 276 (661)
|++++++.|++|+.++ ++|+||.+.+ .+|+...|.||.||+||||++.+ | ..+++++.++|||+.|
T Consensus 270 v~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~~p~~~~~~~~~~~~~tGdgi~~ 348 (572)
T 1d4d_A 270 TDIRLNSRVVRILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKNNERVSKYDPKLKGFKATNHPGATGDGLDV 348 (572)
T ss_dssp CEEESSEEEEEEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTCHHHHHHHCGGGTTCCBSSCTTCSSHHHHH
T ss_pred CeEEecCEEEEEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccCHHHHHHhCccccCCCccCCCCCccHHHHH
Confidence 9999999999999987 8999998875 57877789999999999999974 3 2356788999999999
Q ss_pred HHHcCCccCCCcccccccccccCCCceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHhcCCCCC
Q psy15089 277 ISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGP 356 (661)
Q Consensus 277 a~~aGa~l~~~ef~q~~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~g~g~~~ 356 (661)
|+++|+.+.+|+|+|+||+.....++++++.++++|+++||.+|+||++| +.+|+.++++|..+ ..+
T Consensus 349 a~~~Ga~~~~~~~~q~~p~~~~~~~~l~~~~~~~~g~i~vn~~G~RF~~E-------~~~~~~~~~ai~~~-~~~----- 415 (572)
T 1d4d_A 349 ALQAGAATRDLQYIQAHPTYSPAGGVMITEAVRGNGAIVVNREGNRFMNE-------ITTRDKASAAILQQ-KGE----- 415 (572)
T ss_dssp HHHTTBCEECTTCEEEEEEEETTTTEECCHHHHHTTCEEECTTSCCCSCT-------TSCHHHHHHHHHTS-GGG-----
T ss_pred HHHcCCeEeCCCceeEecccCCCccccchhhhccCceEEECCCCCCccCC-------CCCHhHHHHHHHhC-cCC-----
Confidence 99999999999999999988766777888888899999999999999984 45677777766542 111
Q ss_pred CCCcEEE--e------------------------------CCCCChHHHHhHhhhHHHHHHHHcCCCC-----------C
Q psy15089 357 DKDHVYL--Q------------------------------LHHLPPEDLHQRLPGISETAMIFAGVDV-----------T 393 (661)
Q Consensus 357 ~~~~v~~--d------------------------------~~~~~~~~l~~~~~~~~~~~~~~~gid~-----------~ 393 (661)
..|+ | ..+++++.|+++++.|++.+. .|.|+ .
T Consensus 416 ---~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~ti~ela~~~gi~~~~l~~tv~~yn~~~~--~g~D~~fg~~~~~~~i~ 490 (572)
T 1d4d_A 416 ---SAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAKTVTAYNGFVK--SGKDAQFERPDLPRELV 490 (572)
T ss_dssp ---CEEEEECHHHHTTCTHHHHHHHTTCCEEESSHHHHHHHHTCCHHHHHHHHHHHHHHC---CCCCTTTCCSCCCCCCC
T ss_pred ---eEEEEEChHHhhhccchHHHhhCCcEEEeCCHHHHHHHcCCCHHHHHHHHHHHHHHHh--cCCCcccCCCCCCCcCC
Confidence 1221 1 124677888888888887764 56664 2
Q ss_pred CCC---eeeeccccccccCcccCCCCeEEeecCCCC-ccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHH
Q psy15089 394 REP---IPVLPTVHYNMGGIPTNYKGQVLTHVNGQD-KIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIA 469 (661)
Q Consensus 394 ~~~---i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~-T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa 469 (661)
+.| +++.|..|++||||+||.++||++.+ . |+|||||||||++ +|+||+|||+||+|++|+|||++||++|+
T Consensus 491 ~~Pfya~~v~p~~~~t~GGl~id~~~~Vl~~~---g~~~I~GLyAaGe~~-~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa 566 (572)
T 1d4d_A 491 VAPFYALEIAPAVHHTMGGLVIDTKAEVKSEK---TAKPITGLYAAGEVT-GGVHGANRLGGNAISDIVTYGRIAGASAA 566 (572)
T ss_dssp SSSEEEEEEEEEEEEECCEEEBCTTCEEEBSS---SSSEEEEEEECSTTE-ESTTTTSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEcccceeCCCeEECCCCeEEcCC---CCcccCCeeECeecc-cCCCCCCCCchHhHHHHHHHHHHHHHHHH
Confidence 456 89999999999999999999999877 6 8999999999987 69999999999999999999999999999
Q ss_pred HhcC
Q psy15089 470 EENK 473 (661)
Q Consensus 470 ~~~~ 473 (661)
++++
T Consensus 567 ~~~~ 570 (572)
T 1d4d_A 567 KFAK 570 (572)
T ss_dssp HTTC
T ss_pred HHhh
Confidence 8763
No 11
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=100.00 E-value=1e-52 Score=474.18 Aligned_cols=380 Identities=28% Similarity=0.455 Sum_probs=314.2
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCC-----CCCCCHHHHHHHHHhccCCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGN-----MEEDDWHWHMYDTVKGSDWL 130 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~-----~~~d~~~~~~~d~~~~g~~l 130 (661)
..++||||||||+||++||+.|+++|++|+||||....++++..++|+++..... ...++++.++.++++.+.+.
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 3579999999999999999999999999999999988888888888888754321 13577888899999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccC--CcHHHHHHHHHHHHHhC
Q psy15089 131 GDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVAD--RTGHSLLHTLYGQSLRY 208 (661)
Q Consensus 131 ~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~--~~g~~l~~~L~~~a~~~ 208 (661)
+++++++.+++.+.+.++||.++|++|... ..++++.+ +|.+...+ .++..++..|.+.+++.
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~-------~~~~g~~~--------~r~~~~~~~~~~~~~l~~~L~~~~~~~ 263 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDL-------KRSGGARV--------DRTHRPHGGKSSGPEIIDTLRKAAKEQ 263 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEE-------ECCTTCSS--------CCEEECSSSSCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccc-------cccCCCCC--------CceeecCCCCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998542 11233322 34443333 35789999999999999
Q ss_pred CcEEEEeEEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc------CC------CCCCCCCCCChHHH
Q psy15089 209 DCNYFVEYFALDLIIEN-GECKGVIALCLEDGSIHRFNANNTVLATGGYGRA------YF------SCTSAHTCTGDGTA 275 (661)
Q Consensus 209 gv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~------~~------~~~~~~~~tGdG~~ 275 (661)
|+++++++.|++|+.++ ++|+||.+.+ .+|+...|+||.||+||||++.+ |. .+++++.++|||+.
T Consensus 264 gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p~~~~~~~~~~~~~tGdg~~ 342 (566)
T 1qo8_A 264 GIDTRLNSRVVKLVVNDDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVL 342 (566)
T ss_dssp TCCEECSEEEEEEEECTTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHHH
T ss_pred CCEEEeCCEEEEEEECCCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcccCHHHHHHhCccccCCcccCCCCCCcHHHH
Confidence 99999999999999988 9999998875 57877789999999999999975 32 24678899999999
Q ss_pred HHHHcCCccCCCcccccccccccCCCceecccccCCCcEEEcCCCCccccccccccccccchhHhhhhHHHHHHhcCCCC
Q psy15089 276 MISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVG 355 (661)
Q Consensus 276 ~a~~aGa~l~~~ef~q~~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~rd~~~~~i~~e~~~g~g~~ 355 (661)
||+++|+.+.+|+++|+||+.....++++++.++++|+++||.+|+||++|. .+|+.+.+++..+ ..+
T Consensus 343 ~a~~~Ga~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~i~vn~~G~Rf~~E~-------~~~~~~~~~~~~~-~~~---- 410 (566)
T 1qo8_A 343 MAKEIGASMTDIDWVQAHPTVGKDSRILISETVRGVGAVMVNKDGNRFISEL-------TTRDKASDAILKQ-PGQ---- 410 (566)
T ss_dssp HHHHTTBCEESTTCEEEEEEEESSSCSBCCTHHHHTTCEEECTTSCCCSCTT-------SCHHHHHHHHHTS-GGG----
T ss_pred HHHHcCCeEecCcceeecccccCCccccchhhhccCCeEEECCCCCCccCCC-------CCHHHHHHHHHhC-CCC----
Confidence 9999999999999999999877666777888888899999999999999854 4566665555432 000
Q ss_pred CCCCcEEE--e------------------------------CCCCChHHHHhHhhhHHHHHHHHcCCCC-----------
Q psy15089 356 PDKDHVYL--Q------------------------------LHHLPPEDLHQRLPGISETAMIFAGVDV----------- 392 (661)
Q Consensus 356 ~~~~~v~~--d------------------------------~~~~~~~~l~~~~~~~~~~~~~~~gid~----------- 392 (661)
..|+ | ..+++++.|.++++.|++.+. .|.|+
T Consensus 411 ----~~~~i~d~~~~~~~~~~~~~~~~~~~~~~~tl~eLa~~~gi~~~~l~~tv~~yn~~~~--~g~d~~fg~~~~~~~i 484 (566)
T 1qo8_A 411 ----FAWIIFDNQLYKKAKMVRGYDHLEMLYKGDTVEQLAKSTGMKVADLAKTVSDYNGYVA--SGKDTAFGRADMPLNM 484 (566)
T ss_dssp ----CEEEEEEHHHHHHCHHHHHHHHTTCCEEESSHHHHHHHTTCCHHHHHHHHHHHHHHHH--HSCCTTTCCSCCCCCS
T ss_pred ----cEEEEEChHHhhhhhhhHHHhhcCcEEEeCCHHHHHHHhCCCHHHHHHHHHHHHHHHh--cCCCcccCCCCCCCcC
Confidence 0111 1 235788889999999988876 56663
Q ss_pred CCCC---eeeeccccccccCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHH
Q psy15089 393 TREP---IPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIA 469 (661)
Q Consensus 393 ~~~~---i~v~p~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa 469 (661)
.+.| +++.|..|++||||+||.++||++.+ .|+|||||||||++ +|+||+||++|++|++|+|||++||++|+
T Consensus 485 ~~~Pfya~~~~p~~~~t~GGl~vd~~~~vl~~~---g~~I~GLyAaGe~~-~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa 560 (566)
T 1qo8_A 485 TQSPYYAVKVAPGIHHTMGGVAINTTASVLDLQ---SKPIDGLFAAGEVT-GGVHGYNRLGGNAIADTVVFGRIAGDNAA 560 (566)
T ss_dssp CSSSEEEEEEEEEEEEECCEECBCTTCEEEBTT---SCEEEEEEECSTTB-CSSSTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEecccceecccEEECCCCeEECCC---CCEeCCEEeccccc-CCCCCCCCCchhhHHHHHHHHHHHHHHHH
Confidence 2345 89999999999999999999999887 79999999999987 69999999999999999999999999999
Q ss_pred HhcC
Q psy15089 470 EENK 473 (661)
Q Consensus 470 ~~~~ 473 (661)
++++
T Consensus 561 ~~~~ 564 (566)
T 1qo8_A 561 KHAL 564 (566)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 8764
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=100.00 E-value=4.2e-50 Score=447.40 Aligned_cols=401 Identities=19% Similarity=0.189 Sum_probs=292.7
Q ss_pred CcccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCC------CCCCCHHHHHHHHHhc
Q psy15089 53 PVVDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGN------MEEDDWHWHMYDTVKG 126 (661)
Q Consensus 53 ~~~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~------~~~d~~~~~~~d~~~~ 126 (661)
..++.++||||||+|+|||+||+.|+++|++|+||||....++++..++|++....+. ...++++.++.++...
T Consensus 36 ~~~~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 115 (510)
T 4at0_A 36 TEWDYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAA 115 (510)
T ss_dssp CCCSEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHH
T ss_pred cccCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999988888888887776532111 1357888889999899
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccC-----------CCCcccccccCCcccccCCCCccceeee-------
Q psy15089 127 SDWLGDQDAIHYMTREAPKAVIELENYGMPFSRT-----------TDGKIYQRAFGGQSLKYGKGGQAHRCCA------- 188 (661)
Q Consensus 127 g~~l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~-----------~~g~~~~~~~gg~~~~~~~g~~~~r~~~------- 188 (661)
+.+.+++++++.+++.+.+.++||.++|++|... .++..+.....++.+... ....+|.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~-~~~~~r~~~~~~~~~~ 194 (510)
T 4at0_A 116 LGPGADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEI-AAPAPRGHVPQMDGKR 194 (510)
T ss_dssp SCSSCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGT-SCCCCCEECCCCSSCB
T ss_pred hCCCCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccc-cCcccceeeecccccc
Confidence 9999999999999999999999999999998754 111111111111111000 001112211
Q ss_pred ccCCcHH-HHHHHHHHHHHhCCcEEEEeEEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEc-CeEEEcCCcccc-------
Q psy15089 189 VADRTGH-SLLHTLYGQSLRYDCNYFVEYFALDLIIE-NGECKGVIALCLEDGSIHRFNA-NNTVLATGGYGR------- 258 (661)
Q Consensus 189 ~~~~~g~-~l~~~L~~~a~~~gv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A-k~VIlAtGg~~~------- 258 (661)
..+.+|. .+...|.+.+++.|++|++++.|++|+.+ +++|+||.+.+ +|+...|+| |.|||||||++.
T Consensus 195 ~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 195 TGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp TTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 2344565 89999999999999999999999999998 79999998864 566778999 599999999994
Q ss_pred ----cCCC-CCCCCCCCChHHHHHHHcCCccCCCcccccccccccCCCceecccccCCCcEEEcCCCCcccccccccc--
Q psy15089 259 ----AYFS-CTSAHTCTGDGTAMISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVA-- 331 (661)
Q Consensus 259 ----~~~~-~~~~~~~tGdG~~~a~~aGa~l~~~ef~q~~p~~~~~~g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~-- 331 (661)
.+.. +++++.+||||+.||+++||.+.+|+++|++|+. .+..+ .++++||.+|+|||+|..+..
T Consensus 273 ~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~~~~m~~~~~~p~~--~~~~~-------~~~i~vn~~G~RF~nE~~~~~~~ 343 (510)
T 4at0_A 273 HAPRLIGRPGAAIEEHDGRSILMAQALGADLAHMDATEVAFVC--DPQLI-------VRGILVNGRGQRYVPEDTYSGRI 343 (510)
T ss_dssp HCGGGTTCBCCSCTTCCCHHHHHHHTTTBCEECTTCEEEEECS--CHHHH-------TTSEEECTTSCBCSCTTSCHHHH
T ss_pred hCccccCCCCCCCCCCCHHHHHHHHHhCcCeecchhhhccCcc--Chhhc-------cccEEECCCCCCCCCCCccHHHH
Confidence 2222 4567789999999999999999999999988763 22111 358999999999999753220
Q ss_pred c-ccc--c----hhHhhhhHHHHHHhcCC-C--CCCCCcEEEe-------CCCCChHHHHhHhhhHHHHHHHHcCCCCC-
Q psy15089 332 K-DLA--S----RDVVSRSMTIEIREGRG-V--GPDKDHVYLQ-------LHHLPPEDLHQRLPGISETAMIFAGVDVT- 393 (661)
Q Consensus 332 ~-~l~--~----rd~~~~~i~~e~~~g~g-~--~~~~~~v~~d-------~~~~~~~~l~~~~~~~~~~~~~~~gid~~- 393 (661)
. .+. + .-++............. . .+..+....| .-+++++.|++++..|++.+. .|.|+.
T Consensus 344 ~~~~~~~~~~~~~~i~D~~~~~~~~~~~~~~~~~~~~~~~~adtleeLA~~~g~~~~~l~~tv~~yN~~~~--~g~D~~f 421 (510)
T 4at0_A 344 GQMTLFHQDNQAFLIIDEASYEEGAAATTATPFLRVQPKWAAETVEELESDMGLPAGALQSTVEVYNKHAA--EGSDPLL 421 (510)
T ss_dssp HHCCCCCSTTCCEEEEEHHHHHHHHHSCCSCGGGCCCCSEEESSHHHHHHHTTCCTTHHHHHHHHHHHHHT--TTCCTTT
T ss_pred HHHHHhCCCCeEEEEECHHHHHhhhcccccccchhhhhcccCCCHHHHHHHhCcCHHHHHHHHHHHHHHHh--cCCCccc
Confidence 0 000 0 01111111111111000 0 0000111111 125678889999999998875 687764
Q ss_pred -CCC---e---------ee-eccccccccCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhHHH
Q psy15089 394 -REP---I---------PV-LPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVV 459 (661)
Q Consensus 394 -~~~---i---------~v-~p~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v 459 (661)
+++ . ++ .|..|+++|||+||.++||++.| .++|||||||||++ +|+||+||++|++|++|+|
T Consensus 422 gk~~~~l~pi~~Pfya~~~~~~~~~~t~GGl~~d~~~~Vl~~~---g~~I~GLyAaGe~~-gg~~g~~y~~G~sl~~~~~ 497 (510)
T 4at0_A 422 HKKSEWVKPIGTPVAALDLRGFTLGFTLGGLRTTVNSEVLHVS---GEPIPGLFAAGRCT-SGVCAGGYASGTSLGDGSF 497 (510)
T ss_dssp CCCGGGCCCCCSSEEEEECTTCEEEEECCEECBCTTCEEEBTT---SSEEEEEEECGGGB-CCSCSSSCCTTHHHHHHHH
T ss_pred CCCcccccCCCCCEEEEEeecCcccccCcCeeECCCCceECCC---CCCcCCeeeceecc-cCCCcCCCCcHHhHHHHHH
Confidence 321 2 34 58899999999999999999987 78999999999987 4899999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy15089 460 FGRACAKTIAEE 471 (661)
Q Consensus 460 ~G~~Ag~~aa~~ 471 (661)
||++||++|+++
T Consensus 498 fGr~Ag~~aa~~ 509 (510)
T 4at0_A 498 YGRRAGISAAKQ 509 (510)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhc
Confidence 999999999854
No 13
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=100.00 E-value=3e-32 Score=298.40 Aligned_cols=361 Identities=20% Similarity=0.266 Sum_probs=223.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||+|||||+||++||+.|++.|.+|+||||....++.+..+.+|.+.... ...++.++.. +........ ..+
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~---~~~~~~~~~~-~~~~~~~~~-~~~ 99 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTN---RLPLDEIVKH-IPGNGRFLY-SAF 99 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEE---CSCHHHHHHT-CTBTGGGGH-HHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccC---cccHHHHHHH-hccChHHHH-HHH
Confidence 45899999999999999999999999999999987655444444444433221 1223222211 111110110 111
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
. .....+.++|+..+|+++.....|.++ ..+..+..+++.|.+.+++.|++++.++
T Consensus 100 ~--~~~~~~~~~~~~~~G~~~~~~~~g~~~----------------------p~~~~~~~l~~~L~~~~~~~GV~i~~~~ 155 (447)
T 2i0z_A 100 S--IFNNEDIITFFENLGVKLKEEDHGRMF----------------------PVSNKAQSVVDALLTRLKDLGVKIRTNT 155 (447)
T ss_dssp H--HSCHHHHHHHHHHTTCCEEECGGGEEE----------------------ETTCCHHHHHHHHHHHHHHTTCEEECSC
T ss_pred H--hcCHHHHHHHHHhcCCceEEeeCCEEE----------------------CCCCCHHHHHHHHHHHHHHCCCEEEeCc
Confidence 1 112356778889999988654333221 1122457889999999999999999999
Q ss_pred EEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCccCCCc--cccccc
Q psy15089 217 FALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLE--FVQFHP 294 (661)
Q Consensus 217 ~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~l~~~e--f~q~~p 294 (661)
.|++|..++++|.++.+ .+|+ .|+|+.||+|||+++.. ...++|||+.++.++|+.+..+. ++++++
T Consensus 156 ~V~~i~~~~~~v~~V~~---~~G~--~i~Ad~VVlAtGg~s~~------~~g~tG~g~~la~~~G~~~~~~~p~~~~~~~ 224 (447)
T 2i0z_A 156 PVETIEYENGQTKAVIL---QTGE--VLETNHVVIAVGGKSVP------QTGSTGDGYAWAEKAGHTITELFPTEVPILS 224 (447)
T ss_dssp CEEEEEEETTEEEEEEE---TTCC--EEECSCEEECCCCSSSG------GGSCSSHHHHHHHHTTCCEEEEEECSCCEEC
T ss_pred EEEEEEecCCcEEEEEE---CCCC--EEECCEEEECCCCCcCC------CCCCCcHHHHHHHHCCCCcccCcceeeeeec
Confidence 99999998888888764 5665 48999999999998742 34789999999999999987654 555554
Q ss_pred cccc-----CCCceecccccCCCcEEE-cCCCCccccccccccc---cccchhH--hhhhHHHHHHhcCCCCCCCCcEEE
Q psy15089 295 TGIY-----GAGCLITEGCRGEGGYLI-NSEGERFMERYAPVAK---DLASRDV--VSRSMTIEIREGRGVGPDKDHVYL 363 (661)
Q Consensus 295 ~~~~-----~~g~l~~e~~~~~g~~lv-n~~G~rf~~~~~p~~~---~l~~rd~--~~~~i~~e~~~g~g~~~~~~~v~~ 363 (661)
...+ ..+..+ ....+.+ |.+|+||.++...... .+....+ .+..+...+ ++.+.. ...+.+
T Consensus 225 ~~~~~~~~~~~g~~~-----~~~~~~~~~~~g~r~~~~~ge~~~t~~~~~g~~~l~~s~~~~~~~-~~~~~~--~~~~~~ 296 (447)
T 2i0z_A 225 NEPFIRDRSLQGLAL-----RDINLSVLNPKGKAIISHKMDMLFTHFGLSGPAALRCSQFVVKAL-KKFKTN--TIQMSI 296 (447)
T ss_dssp CCHHHHTTTTTTCEE-----EEEEEEECC----CEEEEEEEEEECSSEEESHHHHHHHHHHHHHH-HHHCCS--CEEEEE
T ss_pred CCcccccccccCccc-----CCeEEEEEecCCceEecccCCeEEECCcccHHHHHHHHHHHHHHH-hcccCC--ceEEEE
Confidence 4211 111111 1123456 6778886653211100 0000011 122222233 221000 012456
Q ss_pred eCC-CCChHHHHhHh--------------------h-hHHHHHHHHcCCCCCC-----------------CCeeeec---
Q psy15089 364 QLH-HLPPEDLHQRL--------------------P-GISETAMIFAGVDVTR-----------------EPIPVLP--- 401 (661)
Q Consensus 364 d~~-~~~~~~l~~~~--------------------~-~~~~~~~~~~gid~~~-----------------~~i~v~p--- 401 (661)
|+. .++.+.+.+.+ | .+.+.+....|+++.+ +.+++.+
T Consensus 297 d~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 376 (447)
T 2i0z_A 297 DALPEENSEQLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGT 376 (447)
T ss_dssp ESCTTSCHHHHHHHHHHHHTTSTTSBHHHHTTTSSCHHHHHHHHHHTTCCTTSBGGGSCHHHHHHHHHHHHHEEEEECEE
T ss_pred ECCCCCCHHHHHHHHHHHHHhChhhhHHHhccccChHHHHHHHHHHcCCCcCCchhhCCHHHHHHHHHHhhCCEEEecCC
Confidence 643 34455442222 1 1233344456888654 2244444
Q ss_pred ----cccccccCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhcC
Q psy15089 402 ----TVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENK 473 (661)
Q Consensus 402 ----~~~~~~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~ 473 (661)
.+|+|+|||.+|+ ++..++....|||||||||++ ++|| |+||++|.+|++||++||++|+++++
T Consensus 377 ~~~~~a~~T~GGv~~~~----i~~~t~~~~~i~GLy~aGEv~--~v~g--~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 377 QSIEKAFVTGGGVSVKE----INPKEMSSKFTNGLYFCGEVL--DIHG--YTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp CCGGGCSSEEEEECGGG----EETTTTEESSSBTEEECGGGB--SCBC--CTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCccEEEEeCCceeeec----ccccccccCcCCCEEEEEeec--cCcc--CCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 3899999999998 333334457899999999987 3898 89999999999999999999998864
No 14
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.91 E-value=3e-23 Score=223.26 Aligned_cols=348 Identities=17% Similarity=0.189 Sum_probs=191.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||+|||||+||++||+.|+++|.+|+||||....++....+.||.+..... . ..+..+ +....... ...+
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~-~-~~~~~~----~~~~~~~~-~~~l 75 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNL-E-VTPAHY----LSQNPHFV-KSAL 75 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEES-S-CCGGGE----ECSCTTST-HHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCC-c-cCHHHh----ccCCHHHH-HHHH
Confidence 469999999999999999999999999999999875544443444454421110 0 000000 00000000 1111
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
..+ ...+.++++.++|+++.....+..+ ..+ ....+.+.|.+.+++.|++++.++
T Consensus 76 ~~~--~~~~~~~~~~~~Gi~~~~~~~g~~~----------------------p~~-~~~~l~~~L~~~~~~~Gv~i~~~~ 130 (401)
T 2gqf_A 76 ARY--TNWDFISLVAEQGITYHEKELGQLF----------------------CDE-GAEQIVEMLKSECDKYGAKILLRS 130 (401)
T ss_dssp HHS--CHHHHHHHHHHTTCCEEECSTTEEE----------------------ETT-CTHHHHHHHHHHHHHHTCEEECSC
T ss_pred HhC--CHHHHHHHHHhCCCceEECcCCEEc----------------------cCC-CHHHHHHHHHHHHHHCCCEEEeCC
Confidence 111 1345678888999988654333221 111 346888999999999999999999
Q ss_pred EEEEEEEe----CCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCccCCC--ccc
Q psy15089 217 FALDLIIE----NGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDL--EFV 290 (661)
Q Consensus 217 ~v~~l~~~----~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~l~~~--ef~ 290 (661)
.|+++..+ ++.+ .+. ..+| .+.|+.||+|||+.+.. ..+++|+|+.++.++|+.+..+ ..+
T Consensus 131 ~v~~i~~~~~g~~~~~-~v~---~~~g---~i~ad~VVlAtG~~s~p------~~g~~G~g~~la~~~G~~i~~~~p~l~ 197 (401)
T 2gqf_A 131 EVSQVERIQNDEKVRF-VLQ---VNST---QWQCKNLIVATGGLSMP------GLGATPFGYQIAEQFGIPVIPPRASLV 197 (401)
T ss_dssp CEEEEEECCSCSSCCE-EEE---ETTE---EEEESEEEECCCCSSCG------GGTCCSHHHHHHHHTTCCEEEEEEESC
T ss_pred EEEEEEcccCcCCCeE-EEE---ECCC---EEECCEEEECCCCccCC------CCCCChHHHHHHHHCCCCcccCcceee
Confidence 99999876 4543 232 2444 48999999999998743 2368999999999999987654 223
Q ss_pred ccccccccCC-CceecccccCCCcEEEcCCCCccccccccccccccch-hHhhhhHHHHHHhcCCCCCCCCcEEEeCC-C
Q psy15089 291 QFHPTGIYGA-GCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASR-DVVSRSMTIEIREGRGVGPDKDHVYLQLH-H 367 (661)
Q Consensus 291 q~~p~~~~~~-g~l~~e~~~~~g~~lvn~~G~rf~~~~~p~~~~l~~r-d~~~~~i~~e~~~g~g~~~~~~~v~~d~~-~ 367 (661)
+|+.+..... ..+-...+ +..+.+. |+....+ ++.-+ .-++-.+..++..- +.. ...+.+|+. .
T Consensus 198 ~~~~~~~~~~~~~l~g~~~--~~~~~i~--G~~~~~g------~~l~t~~g~sG~~~l~~s~~--~~~-~~~~~i~~~p~ 264 (401)
T 2gqf_A 198 PFTYRETDKFLTALSGISL--PVTITAL--CGKSFYN------QLLFTHRGISGPAVLQISNY--WQP-TESVEIDLLPN 264 (401)
T ss_dssp CEECCGGGGGGGGGTTCEE--EEEEEET--TSCEEEE------EEEECSSEEESHHHHHHTTT--CCT-TCCEEEESCSS
T ss_pred ceecCCchhhcccCCCeee--eeEEEEc--CCceEEe------CEEEECCCccHHHHHHHHHH--Hhc-CCEEEEECCCC
Confidence 3321110000 00000000 1112221 2211110 11000 00011111111100 000 012444432 2
Q ss_pred CChHHHHhH-----------------hh-hHHHHHHHHcCCCC------CC-C---------Ceeeec-------ccccc
Q psy15089 368 LPPEDLHQR-----------------LP-GISETAMIFAGVDV------TR-E---------PIPVLP-------TVHYN 406 (661)
Q Consensus 368 ~~~~~l~~~-----------------~~-~~~~~~~~~~gid~------~~-~---------~i~v~p-------~~~~~ 406 (661)
.+.+.+... +| .+........|++. .+ + ..++.+ .++.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt 344 (401)
T 2gqf_A 265 HNVEEEINQAKQSSPKQMLKTILVRLLPKKLVELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVT 344 (401)
T ss_dssp SCHHHHHHHHHHHCTTSBHHHHHTTTSCHHHHHHHHHTTSSCCCBGGGCCHHHHHHHHHHHHCEEECCSEECCTTTCSEE
T ss_pred CCHHHHHHHHhhhcccccHHHHhhhhcCHHHHHHHHHHcCCCCCchhhCCHHHHHHHHHHHhcCEEEecccCCcceeEEe
Confidence 222222111 11 11111222234441 00 0 012222 35668
Q ss_pred ccCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHH
Q psy15089 407 MGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAE 470 (661)
Q Consensus 407 ~GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~ 470 (661)
.|||.+++ ++.++++.+.+||||+|||+. .+|| ++||++|.+|+++|++||++|++
T Consensus 345 ~GGv~~~~----~~~~tmes~~~~gly~~GE~l--dv~g--~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 345 MGGVDTKV----ISSKTMESNQVSGLYFIGEVL--DVTG--WLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp EEEECGGG----BCTTTCBBSSSTTEEECGGGB--SCEE--CTTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCcccccc----CChhhccccCCCCEEEEEEeE--Eecc--CCCCHHHHHHHHHHHHHHHHHhc
Confidence 99999887 333455667899999999986 6888 69999999999999999999864
No 15
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.87 E-value=1.2e-21 Score=211.34 Aligned_cols=187 Identities=19% Similarity=0.252 Sum_probs=124.3
Q ss_pred ccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCC-CCCCCHHHHHHHHHhccCCCCCH
Q psy15089 55 VDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGN-MEEDDWHWHMYDTVKGSDWLGDQ 133 (661)
Q Consensus 55 ~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~-~~~d~~~~~~~d~~~~g~~l~~~ 133 (661)
++.++||+|||||+||++||+.|++.|.+|+|+||....++....+.||.+..... ...+. + ........ .
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~---~----~~~~~~~~-~ 95 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRN---F----LSGNPHFC-K 95 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGG---E----EESSTTTT-H
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHH---H----hhcCHHHH-H
Confidence 34579999999999999999999999999999999876655444444554432221 01110 0 00000000 1
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEE
Q psy15089 134 DAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYF 213 (661)
Q Consensus 134 ~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~ 213 (661)
.....+ ...+.++++++.|+++.....|..+. ......+.+.|.+.+++.|++++
T Consensus 96 ~~l~~~--~~~~~~~~~~~~Gi~~~~~~~g~~~~-----------------------~~~~~~l~~~L~~~l~~~Gv~i~ 150 (417)
T 3v76_A 96 SALARY--RPQDFVALVERHGIGWHEKTLGQLFC-----------------------DHSAKDIIRMLMAEMKEAGVQLR 150 (417)
T ss_dssp HHHHHS--CHHHHHHHHHHTTCCEEECSTTEEEE-----------------------SSCHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHhc--CHHHHHHHHHHcCCCcEEeeCCEEee-----------------------CCCHHHHHHHHHHHHHHCCCEEE
Confidence 111111 12456778888999886554443221 22346888999999999999999
Q ss_pred EeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCCCCCCCCCCCChHHHHHHHcCCccCCC
Q psy15089 214 VEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDL 287 (661)
Q Consensus 214 ~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~~~~~~~~~tGdG~~~a~~aGa~l~~~ 287 (661)
.++.|+++..+++.+ .+. ..+| .+.||.||+|||+++.. ..+.+|+|+.++...|..+..+
T Consensus 151 ~~~~V~~i~~~~~~~-~V~---~~~g---~i~ad~VIlAtG~~S~p------~~gs~g~g~~la~~~G~~i~~~ 211 (417)
T 3v76_A 151 LETSIGEVERTASGF-RVT---TSAG---TVDAASLVVASGGKSIP------KMGATGLAYRIAEQFGLPVVET 211 (417)
T ss_dssp CSCCEEEEEEETTEE-EEE---ETTE---EEEESEEEECCCCSSCG------GGTCCCHHHHHHHHTTCCEEEE
T ss_pred ECCEEEEEEEeCCEE-EEE---ECCc---EEEeeEEEECCCCccCC------CCCCCcHHHHHHHHCCCCEecc
Confidence 999999999887753 232 2455 58999999999998732 2368999999999999987654
No 16
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.74 E-value=4.7e-18 Score=189.49 Aligned_cols=155 Identities=21% Similarity=0.293 Sum_probs=95.6
Q ss_pred ccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC--CCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCC
Q psy15089 55 VDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF--PTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGD 132 (661)
Q Consensus 55 ~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~--~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~ 132 (661)
+..+|||+|||||+||+.||+.|++.|.+|+|||+.. ....++..+.||++ ..++.+.+.....+
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia-----------~~~lv~el~al~g~-- 84 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVA-----------KGQITREIDALGGE-- 84 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHH-----------HHHHHHHHHHHTCS--
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhh-----------HHHHHHHHHhcccH--
Confidence 3456999999999999999999999999999999973 22222222333331 11222222211111
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhC-CcE
Q psy15089 133 QDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRY-DCN 211 (661)
Q Consensus 133 ~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~-gv~ 211 (661)
...++...|+.|.....++ +. ..+......+. ..+...|.+.+++. |++
T Consensus 85 -------------~~~~~d~~gi~f~~l~~~k-------gp--------av~~~r~~~Dr--~~l~~~L~~~l~~~~GV~ 134 (641)
T 3cp8_A 85 -------------MGKAIDATGIQFRMLNRSK-------GP--------AMHSPRAQADK--TQYSLYMRRIVEHEPNID 134 (641)
T ss_dssp -------------HHHHHHHHEEEEEEECSSS-------CT--------TTCEEEEEECH--HHHHHHHHHHHHTCTTEE
T ss_pred -------------HHHHHHhcCCchhhccccc-------Cc--------cccchhhhcCH--HHHHHHHHHHHHhCCCCE
Confidence 0122334566664332211 00 00111112222 46777888888774 999
Q ss_pred EEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 212 YFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 212 i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
++ +..|++|..++++|.||.+ .+|+ .|.||.||+|||++..
T Consensus 135 I~-~~~V~~L~~d~g~V~GV~t---~~G~--~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 135 LL-QDTVIGVSANSGKFSSVTV---RSGR--AIQAKAAILACGTFLN 175 (641)
T ss_dssp EE-ECCEEEEEEETTEEEEEEE---TTSC--EEEEEEEEECCTTCBT
T ss_pred EE-eeEEEEEEecCCEEEEEEE---CCCc--EEEeCEEEECcCCCCC
Confidence 86 4589999999999998875 5665 4899999999999864
No 17
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.65 E-value=7.8e-15 Score=162.52 Aligned_cols=155 Identities=20% Similarity=0.262 Sum_probs=97.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcc------------------cccCceEEccCCCCCCCHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTV------------------AAQGGINAALGNMEEDDWHW 118 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~------------------~a~Gg~~~~~~~~~~d~~~~ 118 (661)
.++||+|||||++|++||+.|++.|++|+||||+...+.... ...||.... . ....
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~-s---dgkl-- 179 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTF-S---DGKL-- 179 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTT-S---CCCC--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccc-c---CCce--
Confidence 458999999999999999999999999999999753211000 000110000 0 0000
Q ss_pred HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHH
Q psy15089 119 HMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLL 198 (661)
Q Consensus 119 ~~~d~~~~g~~l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~ 198 (661)
...+.++.. .....++++..+|.+.....++.. . ........+.
T Consensus 180 --------~~~i~~~~~------~~~~v~~~~~~~G~~~~i~~~~~p----~------------------~G~~~~~~l~ 223 (549)
T 3nlc_A 180 --------YSQVKDPNF------YGRKVITEFVEAGAPEEILYVSKP----H------------------IGTFKLVTMI 223 (549)
T ss_dssp --------CCCSCCTTC------HHHHHHHHHHHTTCCGGGGTBSSC----C------------------CCHHHHHHHH
T ss_pred --------EEEeccccc------cHHHHHHHHHHcCCCceEeecccc----c------------------cccchHHHHH
Confidence 000001000 112344666778877543322110 0 0001125688
Q ss_pred HHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 199 HTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 199 ~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
+.|.+.+++.|+++++++.|+++..+++++.++.+ .+|+ .+.|+.||+|+|..++
T Consensus 224 ~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l---~~G~--~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 224 EKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTL---SNGE--EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEE---TTSC--EEECSCEEECCCTTCH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEE---CCCC--EEECCEEEECCCCChh
Confidence 88999999999999999999999998888888765 5665 4899999999998653
No 18
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.63 E-value=1e-15 Score=158.27 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=32.5
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
+++|||+|||||+||++||+.|++.|++|+|+||..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456999999999999999999999999999999874
No 19
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.61 E-value=8.5e-15 Score=162.74 Aligned_cols=154 Identities=22% Similarity=0.266 Sum_probs=93.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC--CCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF--PTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQD 134 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~--~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~ 134 (661)
.++||||||||+||+.||+.|++.|++|+|||+.. ....++..+.||+. ..++.+.+....+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia-----------~g~lv~eldalgg~---- 90 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIA-----------KGIVVREIDALGGE---- 90 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTT-----------HHHHHHHHHHHTCS----
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccc-----------hHHHHHHHHHhhhH----
Confidence 46999999999999999999999999999999973 22111111222210 01111111110000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHh-CCcEEE
Q psy15089 135 AIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLR-YDCNYF 213 (661)
Q Consensus 135 ~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~-~gv~i~ 213 (661)
....+...|+.|....... |. ..+......+ ...+...|.+.+++ .|+++
T Consensus 91 -----------~~~~~d~~gi~f~~l~~~k-------Gp--------av~~~r~~~D--r~~~~~~L~~~Le~~~GVeI- 141 (637)
T 2zxi_A 91 -----------MGKAIDQTGIQFKMLNTRK-------GK--------AVQSPRAQAD--KKRYREYMKKVCENQENLYI- 141 (637)
T ss_dssp -----------HHHHHHHHEEEEEEESTTS-------CG--------GGCEEEEEEC--HHHHHHHHHHHHHTCTTEEE-
T ss_pred -----------HHHHhhhcccceeeccccc-------Cc--------cccchhhhCC--HHHHHHHHHHHHHhCCCCEE-
Confidence 0112233455554321100 00 0111111222 25677888888887 49998
Q ss_pred EeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 214 VEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 214 ~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
.+..|++|..++++|.||.+ .+|. .|.|+.||+|||++...
T Consensus 142 ~~~~Vt~L~~e~g~V~GV~t---~dG~--~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 142 KQEEVVDIIVKNNQVVGVRT---NLGV--EYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp EESCEEEEEESSSBEEEEEE---TTSC--EEECSEEEECCTTCBTC
T ss_pred EEeEEEEEEecCCEEEEEEE---CCCc--EEEeCEEEEccCCCccC
Confidence 46799999998899998875 5664 48999999999998653
No 20
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.60 E-value=1.5e-14 Score=154.53 Aligned_cols=61 Identities=21% Similarity=0.223 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...|.+.+.+.|++++.++.++++..+++++.++... .+++...++|+.||.|+|..+
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~--~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIR--HNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEE--ETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeec--ccccceEEEEeEEEeCCcccc
Confidence 5678889999999999999999999999999999888765 467777899999999999655
No 21
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.59 E-value=2.4e-14 Score=159.71 Aligned_cols=154 Identities=24% Similarity=0.319 Sum_probs=92.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC--CCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF--PTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQD 134 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~--~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~ 134 (661)
.++||||||||+||++||+.|++.|++|+|||+.. ....++..+.||+. ..++.+.+......
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia-----------~~~lv~ei~algg~---- 91 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIG-----------KGHLVKEVDALGGL---- 91 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTT-----------HHHHHHHHHHTTCS----
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchh-----------hHHHHHHHHHhccH----
Confidence 46999999999999999999999999999999963 22111111222210 11122221111100
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHh-CCcEEE
Q psy15089 135 AIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLR-YDCNYF 213 (661)
Q Consensus 135 ~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~-~gv~i~ 213 (661)
...+....++.|....... +. ..+......+ ...+...|.+.+++ .|+++
T Consensus 92 -----------~~~~~d~~gi~f~~l~~~k-------gp--------av~~~r~~~D--r~~~~~~L~e~Le~~~GV~I- 142 (651)
T 3ces_A 92 -----------MAKAIDQAGIQFRILNASK-------GP--------AVRATRAQAD--RVLYRQAVRTALENQPNLMI- 142 (651)
T ss_dssp -----------HHHHHHHHEEEEEEESTTS-------CG--------GGCEEEEEEC--HHHHHHHHHHHHHTCTTEEE-
T ss_pred -----------HHHHhhhcccchhhhhccc-------Cc--------ccccchhhCC--HHHHHHHHHHHHHhCCCCEE-
Confidence 0112223355543221100 00 0011111122 24677788888887 59998
Q ss_pred EeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 214 VEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 214 ~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
.+..|++|..++++|.||.+ .+|. .|.||.||+|||+++..
T Consensus 143 ~~~~V~~L~~e~g~V~GV~t---~dG~--~I~Ad~VVLATGt~s~~ 183 (651)
T 3ces_A 143 FQQAVEDLIVENDRVVGAVT---QMGL--KFRAKAVVLTVGTFLDG 183 (651)
T ss_dssp EECCEEEEEESSSBEEEEEE---TTSE--EEEEEEEEECCSTTTCC
T ss_pred EEEEEEEEEecCCEEEEEEE---CCCC--EEECCEEEEcCCCCccC
Confidence 56799999998899988875 5663 58999999999998753
No 22
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.56 E-value=1.6e-15 Score=168.23 Aligned_cols=54 Identities=26% Similarity=0.399 Sum_probs=44.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGN 110 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~ 110 (661)
.+|||+|||+|+||+.||++|++.|.||+|||+.......+....||.|.+.++
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GC 94 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGC 94 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccch
Confidence 469999999999999999999999999999998765443344457888877774
No 23
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.55 E-value=3.7e-15 Score=154.60 Aligned_cols=35 Identities=34% Similarity=0.502 Sum_probs=33.0
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.+|||+|||||+||++||++|++.|++|+|+||..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 47999999999999999999999999999999864
No 24
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.55 E-value=9.8e-16 Score=169.27 Aligned_cols=155 Identities=21% Similarity=0.216 Sum_probs=92.2
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.+|||+|||||+||++||+.|++.|.+|+||||......++....||.|.+.+ |.|...
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~g---------------------ciPsk~ 63 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVG---------------------CIPKKL 63 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHS---------------------HHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccC---------------------CcccHH
Confidence 46999999999999999999999999999999865444444445677765443 234444
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
..........+..+..+|+.+.....-.+ .......+.....+...+...+++.+++++.+.
T Consensus 64 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~ 125 (488)
T 3dgz_A 64 MHQAALLGGMIRDAHHYGWEVAQPVQHNW------------------KTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 125 (488)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSSCCCCH------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE
T ss_pred HHHHHHHHHHHHHHHhcCcccCCcCccCH------------------HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 44444555566677778887642111000 000000000011222233344556789876554
Q ss_pred EEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 217 FALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 217 ~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
+.. .+...+ .+. ..+|+...+.+|.||||||+..
T Consensus 126 -~~~--~~~~~v---~v~-~~~g~~~~~~~d~lViATGs~p 159 (488)
T 3dgz_A 126 -ASF--VDEHTV---RGV-DKGGKATLLSAEHIVIATGGRP 159 (488)
T ss_dssp -EEE--SSSSEE---EEE-CTTSCEEEEEEEEEEECCCEEE
T ss_pred -EEE--ccCCeE---EEE-eCCCceEEEECCEEEEcCCCCC
Confidence 221 233332 222 3567667799999999999743
No 25
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.53 E-value=4.2e-15 Score=165.32 Aligned_cols=156 Identities=22% Similarity=0.197 Sum_probs=93.5
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
..+|||+|||||+||++||+.|++.|++|+||||......++.+..||.+.+.+ |.|..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~G---------------------ciPsk 88 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVG---------------------CIPKK 88 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHS---------------------HHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcC---------------------ccchH
Confidence 456999999999999999999999999999999976544455456777765543 22333
Q ss_pred HHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEe
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVE 215 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~ 215 (661)
...........+..+..+|+++.....-.+ .+.....+.....+...+....++.+++++.+
T Consensus 89 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~d~------------------~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g 150 (519)
T 3qfa_A 89 LMHQAALLGQALQDSRNYGWKVEETVKHDW------------------DRMIEAVQNHIGSLNWGYRVALREKKVVYENA 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCCCSSCCBCH------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS
T ss_pred HHHHHHHHHHHHHHHHhcCcccCCcCccCH------------------HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 333344445566777778887642211000 00000000011122233334455678998765
Q ss_pred EEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 216 YFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 216 ~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
. +.. .+...+. +. ..+|+...+.+|.||||||+..
T Consensus 151 ~-a~~--~d~~~v~---v~-~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 151 Y-GQF--IGPHRIK---AT-NNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp E-EEE--EETTEEE---EE-CTTCCCCEEEEEEEEECCCEEE
T ss_pred E-EEE--eeCCEEE---EE-cCCCCEEEEECCEEEEECCCCc
Confidence 4 222 2344322 22 2566655799999999999743
No 26
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.52 E-value=2.4e-14 Score=148.56 Aligned_cols=111 Identities=21% Similarity=0.286 Sum_probs=76.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHH
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIH 137 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~ 137 (661)
.+||+|||||+||++||+.|++.|++|+|+||. . ++ ..... +..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~-gg-~~~~~-~~~-------------------------------- 58 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-P-GG-QLTEA-GIV-------------------------------- 58 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-T-TG-GGGGC-CEE--------------------------------
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-C-CC-eeccc-ccc--------------------------------
Confidence 589999999999999999999999999999997 2 11 11000 000
Q ss_pred HHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEE
Q psy15089 138 YMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYF 217 (661)
Q Consensus 138 ~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~ 217 (661)
+.+ ++ .....+..+...+.+.+++.|++++. ..
T Consensus 59 ---------------~~~---------------~~----------------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~ 91 (323)
T 3f8d_A 59 ---------------DDY---------------LG----------------LIEIQASDMIKVFNKHIEKYEVPVLL-DI 91 (323)
T ss_dssp ---------------CCS---------------TT----------------STTEEHHHHHHHHHHHHHTTTCCEEE-SC
T ss_pred ---------------ccc---------------CC----------------CCCCCHHHHHHHHHHHHHHcCCEEEE-EE
Confidence 000 00 00013467888888888889999988 88
Q ss_pred EEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 218 ALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 218 v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
|+++..+++.+. +. ..+|+ .+.++.||+|||+..
T Consensus 92 v~~i~~~~~~~~-v~---~~~g~--~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 92 VEKIENRGDEFV-VK---TKRKG--EFKADSVILGIGVKR 125 (323)
T ss_dssp EEEEEEC--CEE-EE---ESSSC--EEEEEEEEECCCCEE
T ss_pred EEEEEecCCEEE-EE---ECCCC--EEEcCEEEECcCCCC
Confidence 999887655432 22 24554 488999999999874
No 27
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.50 E-value=3.8e-15 Score=154.39 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=32.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
..|||+|||||+||++||++|++.|++|+|+||..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 34899999999999999999999999999999864
No 28
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.49 E-value=5.2e-14 Score=146.77 Aligned_cols=117 Identities=16% Similarity=0.191 Sum_probs=78.7
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
..+||+|||||+||++||+.|++.|++|+||||....+ |......
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------G~~~~~~--------------------------- 50 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG--------GQLSALY--------------------------- 50 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------HHHHHHC---------------------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC--------ceehhcC---------------------------
Confidence 35899999999999999999999999999999974321 1100000
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
.+..+.. +.+ .....+..+...+.+.+++.+++++.++
T Consensus 51 ----------------~~~~~~~----------~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (332)
T 3lzw_A 51 ----------------PEKYIYD----------VAG----------------FPKIRAQELINNLKEQMAKFDQTICLEQ 88 (332)
T ss_dssp ----------------TTSEECC----------STT----------------CSSEEHHHHHHHHHHHHTTSCCEEECSC
T ss_pred ----------------CCceEec----------cCC----------------CCCCCHHHHHHHHHHHHHHhCCcEEccC
Confidence 0000000 000 0011346788888888888899999999
Q ss_pred EEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 217 FALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 217 ~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
.|+++..+++...-+. ..+|+ +.++.||+|||..
T Consensus 89 ~v~~i~~~~~~~~~v~---~~~g~---~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 89 AVESVEKQADGVFKLV---TNEET---HYSKTVIITAGNG 122 (332)
T ss_dssp CEEEEEECTTSCEEEE---ESSEE---EEEEEEEECCTTS
T ss_pred EEEEEEECCCCcEEEE---ECCCE---EEeCEEEECCCCC
Confidence 9999988765111122 24553 8899999999984
No 29
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.47 E-value=2.6e-14 Score=157.59 Aligned_cols=154 Identities=21% Similarity=0.233 Sum_probs=88.2
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCC-CCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTR-SHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~-~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
.+|||+|||||+||++||++|++.|++|+||||..... .++.+..||.|.+.+ |.|..
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~g---------------------ciPsk 66 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVG---------------------CIPKK 66 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHS---------------------HHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccC---------------------chhhH
Confidence 46999999999999999999999999999999753322 233344677665443 22333
Q ss_pred HHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEe
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVE 215 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~ 215 (661)
...........+..+..+|+++.....-.+ .......+..-..+...+....++.+++++.+
T Consensus 67 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g 128 (483)
T 3dgh_A 67 LMHQASLLGEAVHEAAAYGWNVDDKIKPDW------------------HKLVQSVQNHIKSVNWVTRVDLRDKKVEYING 128 (483)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCCCCCCCBCH------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS
T ss_pred HHHHHHHHHHHHHHHHhcCcccCCcCccCH------------------HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 333344445556667778877643211000 00000000000112222333455678987765
Q ss_pred EEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 216 YFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 216 ~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
... ..+...+. + ...+|+ ..+.+|.+|||||+..
T Consensus 129 ~a~---~~~~~~v~---v-~~~~g~-~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 129 LGS---FVDSHTLL---A-KLKSGE-RTITAQTFVIAVGGRP 162 (483)
T ss_dssp EEE---EEETTEEE---E-ECTTCC-EEEEEEEEEECCCEEE
T ss_pred EEE---EccCCEEE---E-EeCCCe-EEEEcCEEEEeCCCCc
Confidence 422 22444322 2 235565 5689999999999644
No 30
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.44 E-value=1.5e-12 Score=136.90 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+...|.+.+++.|++++.++.|+++..+++.+.++. ..+| .+.++.||+|||.++..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~---~~~g---~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVA---RDGR---QWLARAVISATGTWGEA 134 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEE---TTSC---EEEEEEEEECCCSGGGB
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEE---eCCC---EEEeCEEEECCCCCCCC
Confidence 57788888888889999999999999998887654333 3455 58999999999986654
No 31
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.43 E-value=7.8e-13 Score=138.29 Aligned_cols=118 Identities=25% Similarity=0.282 Sum_probs=79.0
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
..+||+|||||+||++||+.|++.|++|+|+|+....+ |.+...
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------g~~~~~---------------------------- 47 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG--------GQLTAL---------------------------- 47 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC--------HHHHHT----------------------------
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC--------Ceeecc----------------------------
Confidence 35899999999999999999999999999999974321 111000
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
.+.. .++ ...+. ....+..+...|.+.+.+.+++++.++
T Consensus 48 ------------------~~~~-----~~~--~~~~~----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~ 86 (335)
T 2zbw_A 48 ------------------YPEK-----YIY--DVAGF----------------PKVYAKDLVKGLVEQVAPFNPVYSLGE 86 (335)
T ss_dssp ------------------CTTS-----EEC--CSTTC----------------SSEEHHHHHHHHHHHHGGGCCEEEESC
T ss_pred ------------------CCCc-----eee--ccCCC----------------CCCCHHHHHHHHHHHHHHcCCEEEeCC
Confidence 0000 000 00000 001235677888888888899999999
Q ss_pred EEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 217 FALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 217 ~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
.|+.+..+++.+ .+. ..+|+ .+.++.||+|||..+
T Consensus 87 ~v~~i~~~~~~~---~v~-~~~g~--~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 87 RAETLEREGDLF---KVT-TSQGN--AYTAKAVIIAAGVGA 121 (335)
T ss_dssp CEEEEEEETTEE---EEE-ETTSC--EEEEEEEEECCTTSE
T ss_pred EEEEEEECCCEE---EEE-ECCCC--EEEeCEEEECCCCCC
Confidence 999998876632 222 24564 388999999999853
No 32
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.43 E-value=1e-12 Score=136.09 Aligned_cols=144 Identities=21% Similarity=0.264 Sum_probs=99.7
Q ss_pred ccccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQD 134 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~ 134 (661)
.++||+|||||+||++||+.|+++ |++|+||||....+++.+ ..+.. ... ....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~-~~g~~--------~~~-------------~~~~-- 133 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW-LGGQL--------FSA-------------MVMR-- 133 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT-CCBTT--------CCC-------------EEEE--
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc-cCCcc--------chh-------------hhcc--
Confidence 468999999999999999999997 999999999865544322 11100 000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHh-CCcEEE
Q psy15089 135 AIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLR-YDCNYF 213 (661)
Q Consensus 135 ~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~-~gv~i~ 213 (661)
+..++++.++|++|... |.++ +.. ....+.+.|.+++.+ .|++++
T Consensus 134 ---------~~~~~~L~~~Gv~~~~~--G~~~------------------~~~-----~~~d~~~~L~~~a~~~~gV~i~ 179 (344)
T 3jsk_A 134 ---------KPADVFLDEVGVPYEDE--GDYV------------------VVK-----HAALFTSTVLSKVLQRPNVKLF 179 (344)
T ss_dssp ---------TTTHHHHHHHTCCCEEC--SSEE------------------EES-----CHHHHHHHHHHHHHTCTTEEEE
T ss_pred ---------hHHHHHHHHcCCccccc--CCeE------------------EEe-----cHHHHHHHHHHHHHhCCCCEEE
Confidence 12246677889988643 2211 110 124677888888888 499999
Q ss_pred EeEEEEEEEEeC-----------------C--EEEEEEEEEc---CCC------cEEEEEcCeEEEcCCcccc
Q psy15089 214 VEYFALDLIIEN-----------------G--ECKGVIALCL---EDG------SIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 214 ~~~~v~~l~~~~-----------------g--~v~Gv~~~~~---~~G------~~~~i~Ak~VIlAtGg~~~ 258 (661)
.++.+++|+.++ + +|.||++... .+| +...|+|+.||+|||+.+.
T Consensus 180 ~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 180 NATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp ETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred eCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 999999999876 3 8999987532 222 4467999999999997663
No 33
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.42 E-value=1.2e-12 Score=133.96 Aligned_cols=143 Identities=22% Similarity=0.288 Sum_probs=99.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHC-CCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAE-GFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~-G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
.++||+|||||++|++||+.|++. |.+|+||||....++++. ..+++.... ...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~-~~~~~~~~~---------------------~~~--- 92 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAW-LGGQLFSAM---------------------IVR--- 92 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTT-CCSTTCCCE---------------------EEE---
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCcee-cCCcchHHH---------------------HcC---
Confidence 468999999999999999999997 999999999865544332 222211000 000
Q ss_pred HHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHh-CCcEEEE
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLR-YDCNYFV 214 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~-~gv~i~~ 214 (661)
....+++.++|++|... +.+.. ......+...|.+++.+ .|++++.
T Consensus 93 --------~~~~~~l~~~G~~~~~~--~~~~~-----------------------~~~~~~~~~~l~~~~~~~~gv~i~~ 139 (284)
T 1rp0_A 93 --------KPAHLFLDEIGVAYDEQ--DTYVV-----------------------VKHAALFTSTIMSKLLARPNVKLFN 139 (284)
T ss_dssp --------TTTHHHHHHHTCCCEEC--SSEEE-----------------------ESCHHHHHHHHHHHHHTSTTEEEEE
T ss_pred --------cHHHHHHHHcCCCcccC--CCEEE-----------------------ecCHHHHHHHHHHHHHhcCCCEEEc
Confidence 01235666779988643 11100 00124677788888876 6999999
Q ss_pred eEEEEEEEEeCCEEEEEEEEEc---------CCCcEEEEEcCeEEEcCCccc
Q psy15089 215 EYFALDLIIENGECKGVIALCL---------EDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 215 ~~~v~~l~~~~g~v~Gv~~~~~---------~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
++.|+++..+++++.|+.+.+. .+|+...+.||.||+|||+.+
T Consensus 140 ~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 140 AVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp TEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSS
T ss_pred CcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCch
Confidence 9999999999999999877531 114446799999999999765
No 34
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.42 E-value=1.2e-13 Score=152.67 Aligned_cols=37 Identities=30% Similarity=0.430 Sum_probs=31.8
Q ss_pred ccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 55 VDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 55 ~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.+.++||+|||||+||++||+.|++.|++|+||||..
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3456999999999999999999999999999999864
No 35
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.41 E-value=1.7e-13 Score=150.84 Aligned_cols=49 Identities=39% Similarity=0.529 Sum_probs=39.0
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEc
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAA 107 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~ 107 (661)
.+|||+|||||+||++||++|++.|++|+||||....++.+ ..||.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~--~~GG~~~~ 50 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT--ALGGTCLN 50 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB--CCSHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC--CcCCcccc
Confidence 35999999999999999999999999999999986443332 24555433
No 36
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=8.4e-13 Score=139.61 Aligned_cols=185 Identities=12% Similarity=0.080 Sum_probs=103.2
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC-CCCCCcccccCceEEccCCCCCCCHHH--------HHHHHHhcc
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF-PTRSHTVAAQGGINAALGNMEEDDWHW--------HMYDTVKGS 127 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~-~~~~~s~~a~Gg~~~~~~~~~~d~~~~--------~~~d~~~~g 127 (661)
.++||+|||||++|+++|+.|+++|++|+||||.. ...+.+..+.|.+..... ...+.... .+.+.....
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIY-YPADSLKARLCVRGKHLLYEYCAAR 81 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCS-SCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCcc-CCCCCHhHHHHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999999985 444444444443322211 12222211 111111100
Q ss_pred C--C--------CCCHHHHHHHHHHHHHHHHHHHHCCCC-cccCCCCcccccccCCcccccCCCCccceeeec--cCCcH
Q psy15089 128 D--W--------LGDQDAIHYMTREAPKAVIELENYGMP-FSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAV--ADRTG 194 (661)
Q Consensus 128 ~--~--------l~~~~~~~~~~~~~~~~i~~l~~~Gv~-f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~--~~~~g 194 (661)
. + ..++... ......++++..+|++ +........ ...++..... ...+.. .....
T Consensus 82 ~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~p~~~~~-------~~~~~~~~~~~~~ 149 (369)
T 3dme_A 82 GVPHQRLGKLIVATSDAEA----SQLDSIARRAGANGVDDLQHIDGAAA-RRLEPALHCT-------AALVSPSTGIVDS 149 (369)
T ss_dssp TCCEECCCEEEEECSHHHH----TTHHHHHHHHHHTTCCCCEEEEHHHH-HHHCTTCCCS-------EEEEETTCEEECH
T ss_pred CCCcccCCEEEEecCHHHH----HHHHHHHHHHHHcCCCceeecCHHHH-HHhCCCceee-------eeeECCCCEEECH
Confidence 0 0 0011111 1112233444556665 322110000 0001110000 000000 01124
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...|.+.+++.|+++++++.|++|..+++.++.+. ..+|+...+.||.||+|+|+++
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~---~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELD---FGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEE---ECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEE---ECCCceeEEEeCEEEECCCcch
Confidence 68899999999999999999999999998765433343 2567555799999999999876
No 37
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.39 E-value=1.2e-12 Score=146.57 Aligned_cols=64 Identities=17% Similarity=0.162 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
...++..|.+.+++.|++++.++.|++|..+++++.||.+.+..+|+...|+|+.||+|+|.++
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 4678899999999999999999999999999999999999886788777899999999999876
No 38
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.39 E-value=7.6e-13 Score=139.97 Aligned_cols=119 Identities=20% Similarity=0.295 Sum_probs=78.9
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
+..+||+|||||+||++||+.|++.|++|+||||....+ |.+...
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g--------g~~~~~--------------------------- 56 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG--------GQLAAL--------------------------- 56 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC--------HHHHHT---------------------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC--------Cccccc---------------------------
Confidence 346899999999999999999999999999999974321 111000
Q ss_pred HHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEe
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVE 215 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~ 215 (661)
.+. ...+ ...+. ....+..+...|.+.+++.+++++.+
T Consensus 57 -------------------~~~-----~~~~--~~~~~----------------~~~~~~~~~~~l~~~~~~~~~~~~~~ 94 (360)
T 3ab1_A 57 -------------------YPE-----KHIY--DVAGF----------------PEVPAIDLVESLWAQAERYNPDVVLN 94 (360)
T ss_dssp -------------------CTT-----SEEC--CSTTC----------------SSEEHHHHHHHHHHHHHTTCCEEECS
T ss_pred -------------------CCC-----cccc--cCCCC----------------CCCCHHHHHHHHHHHHHHhCCEEEcC
Confidence 000 0000 00000 00123577788888888889999999
Q ss_pred EEEEEEEEeCC-EEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 216 YFALDLIIENG-ECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 216 ~~v~~l~~~~g-~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
+.|+.+..+++ .+. +. ..+|+ .+.++.||+|||+.+
T Consensus 95 ~~v~~i~~~~~~~~~-v~---~~~g~--~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 95 ETVTKYTKLDDGTFE-TR---TNTGN--VYRSRAVLIAAGLGA 131 (360)
T ss_dssp CCEEEEEECTTSCEE-EE---ETTSC--EEEEEEEEECCTTCS
T ss_pred CEEEEEEECCCceEE-EE---ECCCc--EEEeeEEEEccCCCc
Confidence 99999987654 321 22 25564 488999999999854
No 39
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.38 E-value=4e-13 Score=148.08 Aligned_cols=37 Identities=38% Similarity=0.697 Sum_probs=33.7
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
+.++||+|||||+||++||+.|++.|++|+||||...
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4469999999999999999999999999999999643
No 40
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.36 E-value=2.3e-13 Score=142.23 Aligned_cols=59 Identities=19% Similarity=0.179 Sum_probs=44.8
Q ss_pred cCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhcCC
Q psy15089 408 GGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENKP 474 (661)
Q Consensus 408 GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~~ 474 (661)
.|+.+|.+|.+...|....|++||+||+|||++... .....|+..|+.||.+|++++..
T Consensus 278 ~~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~--------~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 278 GQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY--------RQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp TTBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC--------CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc--------cceeeehhhhHHHHHHHHHHHhc
Confidence 378888777765456667799999999999874221 23457889999999999988753
No 41
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.36 E-value=1.2e-11 Score=134.53 Aligned_cols=63 Identities=22% Similarity=0.402 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeE---EEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCC
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEY---FALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYF 261 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~---~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~ 261 (661)
...++..|.+.+++.|+++++++ .|++|..++++++||.+ .+|+ .|.|+.||+|||+++....
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t---~~G~--~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVT---ADGK--IWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEE---TTTE--EEECSEEEECCGGGGGGTS
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEE---CCCC--EEECCEEEECCCCChhhhc
Confidence 46788999999999999999999 99999999999988875 5664 4899999999999886543
No 42
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.35 E-value=5.1e-12 Score=134.67 Aligned_cols=184 Identities=18% Similarity=0.201 Sum_probs=107.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHH------HHHHHHhc-c-C
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHW------HMYDTVKG-S-D 128 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~------~~~d~~~~-g-~ 128 (661)
.++||+|||||++|+++|+.|+++|.+|+||||.....+.|..+.|.+..... .+..... .+.+.... + .
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFN--DEANVRVMKRSVELWKKYSEEYGFS 81 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCS--SHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCC--ChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999986655555555554433221 1110000 11111110 0 0
Q ss_pred -----C---CCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeec--cCCcHHHHH
Q psy15089 129 -----W---LGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAV--ADRTGHSLL 198 (661)
Q Consensus 129 -----~---l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~--~~~~g~~l~ 198 (661)
. ..+++.... .....+++.++|+++.......+. ..++........ ...+.. .......++
T Consensus 82 ~~~~g~l~~~~~~~~~~~----~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~----~~~~~~~~~~~~~~~l~ 152 (382)
T 1y56_B 82 FKQTGYLFLLYDDEEVKT----FKRNIEIQNKFGVPTKLITPEEAK-EIVPLLDISEVI----AASWNPTDGKADPFEAT 152 (382)
T ss_dssp EECCCEEEEECSHHHHHH----HHHHHHHHHHTTCCCEEECHHHHH-HSSTTCCCTTCC----EEEEETTCCEECHHHHH
T ss_pred eeccceEEEEeCHHHHHH----HHHHHHHHHhcCCCcEEeCHHHHH-HhCCCCCcccce----EEEEcCCCeeECHHHHH
Confidence 0 012222222 233445566778765432211100 001100000000 000000 001246888
Q ss_pred HHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 199 HTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 199 ~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..|.+.+++.|++++.++.|+++..+++++.|+.. .+| .+.|+.||+|+|.++
T Consensus 153 ~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~---~~g---~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 153 TAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKT---NKG---IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE---TTE---EEECSEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEE---CCc---EEECCEEEECcchhH
Confidence 99999999999999999999999988888887753 455 489999999999875
No 43
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.35 E-value=7.2e-13 Score=146.07 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=82.5
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||+|||||+||++||+.|++.|++|+||||.. .||.+.+.+ |.|...
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~---------~GG~~~~~g---------------------cip~k~ 74 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR---------IGGTCVIRG---------------------CVPKKL 74 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC---------TTHHHHHHS---------------------HHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC---------CCCceeccC---------------------ccccHH
Confidence 46999999999999999999999999999999953 233332222 223333
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
..........+..+..+|+++... .+ .+ .+.....+.....+...+...+.+.+++++.+.
T Consensus 75 l~~~a~~~~~~~~~~~~g~~~~~~---~~----------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~ 135 (484)
T 3o0h_A 75 YFYASQYAQEFSKSIGFGWKYADP---IF----------NW------EKLVAAKNKEISRLEGLYREGLQNSNVHIYESR 135 (484)
T ss_dssp HHHHHHHHHHHHHHGGGTBCCCCC---EE----------CH------HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC
T ss_pred HHHHHHHHHHHHHHHhCCcccCCC---cc----------CH------HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE
Confidence 334444455555666677654311 00 00 000000111112444555566677899987762
Q ss_pred EEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 217 FALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 217 ~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
+..+ +...+. + . .+++ .+.++.+|+|||+..
T Consensus 136 -~~~i--~~~~v~---v-~-~~~~--~~~~d~lviAtG~~p 166 (484)
T 3o0h_A 136 -AVFV--DEHTLE---L-S-VTGE--RISAEKILIATGAKI 166 (484)
T ss_dssp -EEEE--ETTEEE---E-T-TTCC--EEEEEEEEECCCEEE
T ss_pred -EEEe--eCCEEE---E-e-cCCe--EEEeCEEEEccCCCc
Confidence 3322 333321 1 1 1444 488999999999754
No 44
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.35 E-value=3e-12 Score=144.04 Aligned_cols=170 Identities=21% Similarity=0.243 Sum_probs=99.6
Q ss_pred CCcccccccEEEECCcHHHHHHHHHhHHC------CCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHh
Q psy15089 52 YPVVDHQFDAVVVGAGGAGLRAAFGLVAE------GFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVK 125 (661)
Q Consensus 52 ~~~~~~~~DVlVVGgG~AGl~AA~~aa~~------G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~ 125 (661)
++.+..++||||||||+||++||+.|++. |.+|+||||....+++.. .|+. + .+...+.
T Consensus 29 ~~~~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~--~g~~---l---~~~~l~~------- 93 (584)
T 2gmh_A 29 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL--SGAC---L---DPRAFEE------- 93 (584)
T ss_dssp CCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCC--CCCE---E---CTHHHHH-------
T ss_pred ccccccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccc--cccc---c---CHHHHHH-------
Confidence 34555679999999999999999999999 999999999865544321 1221 1 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCC--CcccccccCCcccccCCCCccce-eeeccCCcHHHHHHHHH
Q psy15089 126 GSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTTD--GKIYQRAFGGQSLKYGKGGQAHR-CCAVADRTGHSLLHTLY 202 (661)
Q Consensus 126 ~g~~l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~--g~~~~~~~gg~~~~~~~g~~~~r-~~~~~~~~g~~l~~~L~ 202 (661)
+ +..+.+.|.++..... ...+....++..++......... ..+. .....+.+.|.
T Consensus 94 -------------l-------l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~r~~l~~~L~ 151 (584)
T 2gmh_A 94 -------------L-------FPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYV--VRLGHLVSWMG 151 (584)
T ss_dssp -------------H-------CTTHHHHTCCCCEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEE--CCHHHHHHHHH
T ss_pred -------------H-------HHHHHhcCCceeeeechhheeeeccCCCccccccCccccccCCCEE--EeHHHHHHHHH
Confidence 1 0111223444321100 00000000000010000000000 0000 12357889999
Q ss_pred HHHHhCCcEEEEeEEEEEEEEeC-CEEEEEEEEEc---CCCcE-------EEEEcCeEEEcCCcccc
Q psy15089 203 GQSLRYDCNYFVEYFALDLIIEN-GECKGVIALCL---EDGSI-------HRFNANNTVLATGGYGR 258 (661)
Q Consensus 203 ~~a~~~gv~i~~~~~v~~l~~~~-g~v~Gv~~~~~---~~G~~-------~~i~Ak~VIlAtGg~~~ 258 (661)
+++++.|++|++++.|+++..++ ++|+||.+.+. .+|+. ..++||.||+|+|+.+.
T Consensus 152 ~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 152 EQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 99999999999999999999875 68888876421 24543 46999999999999874
No 45
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.33 E-value=1.6e-11 Score=131.82 Aligned_cols=189 Identities=14% Similarity=0.124 Sum_probs=107.9
Q ss_pred cccccEEEECCcHHHHHHHHHhHH-CC-CcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHH------HHHHHHhcc
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVA-EG-FKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHW------HMYDTVKGS 127 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~-~G-~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~------~~~d~~~~g 127 (661)
+.++||+|||||++|+++|+.|++ +| .+|+||||....++.|..+.|.+..... ....... .+.+.....
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~ 96 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYL--WDESAGIYEKSLKLWEQLPEDL 96 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCS--SHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCC--CHHHHHHHHHHHHHHHHHHHHh
Confidence 456999999999999999999999 99 9999999988666666665555543321 1111100 011111100
Q ss_pred C----C--------CCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCccccc-CCCCccceeeec--cCC
Q psy15089 128 D----W--------LGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKY-GKGGQAHRCCAV--ADR 192 (661)
Q Consensus 128 ~----~--------l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~-~~g~~~~r~~~~--~~~ 192 (661)
. + ..+++... .....++++.+.|+++......... ..++...... .........+.. ...
T Consensus 97 ~~~~~~~~~g~l~~~~~~~~~~----~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 171 (405)
T 2gag_B 97 EYDFLFSQRGVLNLAHTLGDVR----ESVRRVEANKLNGVDAEWLDPSQVK-EACPIINTSDDIRYPVMGATWQPRAGIA 171 (405)
T ss_dssp TCCCCCBCCCEEEEECSHHHHH----HHHHHHHHHHTBTCCCEEECHHHHH-HHCTTSCCSTTSSSCCCEEEEETTCBBC
T ss_pred CCCcCEecccEEEEEcCHHHHH----HHHHHHHHHHhcCCCceEeCHHHHH-hhCCCCcccccccccceeEEEeCCCccC
Confidence 0 0 01122211 2233445566677765422111000 0000000000 000000000000 111
Q ss_pred cHHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 193 TGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 193 ~g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
....++..|.+.+++.|++++.++.|+++..+++++.++.. .+| .+.||.||+|+|+++
T Consensus 172 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~---~~g---~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKT---TRG---TIHAGKVALAGAGHS 230 (405)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE---TTC---CEEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEe---CCc---eEECCEEEECCchhH
Confidence 24678899999999999999999999999988888777654 455 489999999999865
No 46
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.33 E-value=1.8e-13 Score=150.76 Aligned_cols=36 Identities=28% Similarity=0.406 Sum_probs=33.2
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
..++||+|||||+||++||+.|++.|++|+||||..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 346999999999999999999999999999999863
No 47
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.32 E-value=4.3e-11 Score=137.34 Aligned_cols=179 Identities=10% Similarity=0.096 Sum_probs=101.7
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCC-CCcccccCceEEccCCCCCCCHHHHH-------HHHHhccC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTR-SHTVAAQGGINAALGNMEEDDWHWHM-------YDTVKGSD 128 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~-~~s~~a~Gg~~~~~~~~~~d~~~~~~-------~d~~~~g~ 128 (661)
..+||+|||||++|++||+.|+++|.+|+||||....+ +.|..+.|.+...... ........+ .+....-.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 349 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSK-HDEALNRFFSNAFTFARRFYDQLP 349 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCS-SCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCC-CccHHHHHHHHHHHHHHHHHHHCC
Confidence 34899999999999999999999999999999965443 4444444444322211 111111111 01111000
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCCcc---cCCCCccc-----ccccCCcccccCCCCccceeee
Q psy15089 129 ------------WLGDQDAIHYMTREAPKAVIELENYGMPFS---RTTDGKIY-----QRAFGGQSLKYGKGGQAHRCCA 188 (661)
Q Consensus 129 ------------~l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~---~~~~g~~~-----~~~~gg~~~~~~~g~~~~r~~~ 188 (661)
...+.. ..+.+.++...|++.. ........ ....++... +.
T Consensus 350 ~~~~~~~~g~l~~~~~~~--------~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~--------p~--- 410 (676)
T 3ps9_A 350 VKFDHDWCGVTQLGWDEK--------SQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITY--------PQ--- 410 (676)
T ss_dssp SCCCEECCCEEEECCSHH--------HHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEE--------TT---
T ss_pred CCcCcCcCCeeeecCCHH--------HHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEe--------cC---
Confidence 001111 1122333444555432 10000000 000011000 00
Q ss_pred ccCCcHHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCC
Q psy15089 189 VADRTGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYF 261 (661)
Q Consensus 189 ~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~ 261 (661)
........++..|.+.+++.|+++++++.|++|..+++.+ +|.. .+|+. +.|+.||+|||+++..+.
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t---~~G~~--i~Ad~VVlAtG~~s~~l~ 477 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCW-LLNF---AGDQQ--ATHSVVVLANGHQISRFS 477 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEE-EEEE---TTSCE--EEESEEEECCGGGGGCST
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeE-EEEE---CCCCE--EECCEEEECCCcchhccc
Confidence 0011246899999999999999999999999999988864 3332 45553 899999999999876543
No 48
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.32 E-value=1.3e-12 Score=143.15 Aligned_cols=33 Identities=36% Similarity=0.571 Sum_probs=31.8
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
++||+|||||+||++||+.|++.|.+|+||||.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 589999999999999999999999999999997
No 49
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.31 E-value=1.5e-11 Score=137.98 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
...++..|.+.+.+.|+++++++.|++|..++++|.||.+.|..+|+...|+||.||+|||.++.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 35788888899999999999999999999999999999887755777667999999999998764
No 50
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.30 E-value=4.1e-11 Score=137.75 Aligned_cols=185 Identities=14% Similarity=0.082 Sum_probs=99.5
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCC-CCcccccCceEEccCCCCCCCHHHHH----------HHHH-
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTR-SHTVAAQGGINAALGNMEEDDWHWHM----------YDTV- 124 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~-~~s~~a~Gg~~~~~~~~~~d~~~~~~----------~d~~- 124 (661)
.++||+|||||++|+++|+.|+++|.+|+||||....+ +.|..+.|.+...... .......++ ++.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~-~~~~~~~~~~~~~~~a~~~~~~l~ 341 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNG-KNDALETFFTSAFTFARRQYDQLL 341 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCS-SCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCC-CChHHHHHHHHHHHHHHHHHHHhh
Confidence 46899999999999999999999999999999975444 4444444444322221 111111111 0111
Q ss_pred hccCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCCcc---cCCCCcccccccCCcccccCCCCccceeeecc
Q psy15089 125 KGSDW-----------LGDQDAIHYMTREAPKAVIELENYGMPFS---RTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVA 190 (661)
Q Consensus 125 ~~g~~-----------l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~---~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~ 190 (661)
..+.. ..+.+ ..+.+.++.+.|++.. ....... ...++ .. ...++.... ...
T Consensus 342 ~~~~~~~~~~~g~l~~~~~~~--------~~~~~~~~~~~g~~~~~~~~l~~~~~-~~~~~-l~--~~~gg~~~p--~~g 407 (689)
T 3pvc_A 342 EQGIAFDHQWCGVSQLAFDDK--------SRGKIEKMLHTQWPVEFAEAMSREQL-SELAG-LD--CAHDGIHYP--AGG 407 (689)
T ss_dssp HTTCCCCEECCCEEEECCSHH--------HHHHHHHHTTSCCCTTTCEEECHHHH-HHHHS-SC--CSSCEEEET--TCE
T ss_pred hhccccccccCceEEeccCHH--------HHHHHHHHHhcCCChHHhhccCHHHH-HHhcC-CC--cccceEEec--CCe
Confidence 10000 00111 1112223333444432 0000000 00000 00 000000000 001
Q ss_pred CCcHHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccCC
Q psy15089 191 DRTGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYF 261 (661)
Q Consensus 191 ~~~g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~~ 261 (661)
......++..|.+.+++.|++|++++.|++|..+++.+ +|.. .+|+ ..+.|+.||+|+|+++..+.
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v-~V~t---~~G~-~~i~Ad~VVlAtG~~s~~l~ 473 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQW-QLTF---GQSQ-AAKHHATVILATGHRLPEWE 473 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSE-EEEE---C-CC-CCEEESEEEECCGGGTTCST
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeE-EEEe---CCCc-EEEECCEEEECCCcchhccc
Confidence 11346899999999999999999999999999987764 3332 4453 13889999999999875543
No 51
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.30 E-value=1.1e-11 Score=132.63 Aligned_cols=155 Identities=20% Similarity=0.156 Sum_probs=93.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||+|||||+||+++|+.|++.|.+|+||||....++... ..+++.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~-~~~~~~------------------------------- 50 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVR-CGEGLS------------------------------- 50 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCC-SCCEEE-------------------------------
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcc-cccccC-------------------------------
Confidence 358999999999999999999999999999999864433211 111111
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCC----CCcccccccCCcc-cccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTT----DGKIYQRAFGGQS-LKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCN 211 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~----~g~~~~~~~gg~~-~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~ 211 (661)
.+.+.++|+.-.... -.........+.. ..+............. ....+.+.|.+.+++.|++
T Consensus 51 ----------~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~~~~~gv~ 118 (397)
T 3cgv_A 51 ----------KGILNEADIKADRSFIANEVKGARIYGPSEKRPIILQSEKAGNEVGYVL--ERDKFDKHLAALAAKAGAD 118 (397)
T ss_dssp ----------THHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEEEC-----CCCEEEE--CHHHHHHHHHHHHHHHTCE
T ss_pred ----------HHHHHHcCCCCChHHhhhhcceEEEEcCCCCEEEEEeccccCCceeEEE--eHHHHHHHHHHHHHhCCCE
Confidence 011223333111000 0000000000100 0000000000000011 1257888999999889999
Q ss_pred EEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 212 YFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 212 i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
++.++.|+++..+++.+.||.+.+ .++...+.|+.||.|+|..+
T Consensus 119 i~~~~~v~~i~~~~~~v~gv~~~~--~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 119 VWVKSPALGVIKENGKVAGAKIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EESSCCEEEEEEETTEEEEEEEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred EEECCEEEEEEEeCCEEEEEEEEE--CCeEEEEEcCEEEECCCcch
Confidence 999999999999999999988754 34455799999999999765
No 52
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.30 E-value=2.5e-11 Score=132.57 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+.+.|.+.+.+.|++++.++.|+++..+++.|+||.+.+..+|+...+.|+.||.|+|..+..
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 57888999999889999999999999999999999988765227776779999999999988754
No 53
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.30 E-value=1.1e-11 Score=127.60 Aligned_cols=143 Identities=20% Similarity=0.320 Sum_probs=97.5
Q ss_pred ccccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQD 134 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~ 134 (661)
.++||+|||||++|++||+.|++. |++|+|+|+....+++++.. +...... ...
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~-g~~~~~~---------------------~~~-- 119 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG-GQLFSAM---------------------VMR-- 119 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC-GGGCCCE---------------------EEE--
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccccc-Ccccchh---------------------hhh--
Confidence 457999999999999999999998 99999999987655443321 1110000 000
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhC-CcEEE
Q psy15089 135 AIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRY-DCNYF 213 (661)
Q Consensus 135 ~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~-gv~i~ 213 (661)
.+...+|.++|++|... +.++.. .....+...|.+++.+. |++++
T Consensus 120 ---------~~~~~~L~~~Gv~~~~~--g~~~~~-----------------------~~~~~~~~~L~~~a~~~~GV~i~ 165 (326)
T 2gjc_A 120 ---------KPAHLFLQELEIPYEDE--GDYVVV-----------------------KHAALFISTVLSKVLQLPNVKLF 165 (326)
T ss_dssp ---------TTTHHHHHHTTCCCEEC--SSEEEE-----------------------SCHHHHHHHHHHHHHTSTTEEEE
T ss_pred ---------hHHHHHHHhhCcccccC--CCeEEE-----------------------cchHHHHHHHHHHHHHhcCcEEE
Confidence 11245677889988743 222110 01246788888888885 99999
Q ss_pred EeEEEEEEEEe---C-C--EEEEEEEEEc---CCC------cEEEEEc---------------CeEEEcCCccc
Q psy15089 214 VEYFALDLIIE---N-G--ECKGVIALCL---EDG------SIHRFNA---------------NNTVLATGGYG 257 (661)
Q Consensus 214 ~~~~v~~l~~~---~-g--~v~Gv~~~~~---~~G------~~~~i~A---------------k~VIlAtGg~~ 257 (661)
.++.|++|+.+ + + +|+||++... .+| ....|.| +.||+|||.-+
T Consensus 166 ~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 166 NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp TTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred ecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 99999999987 3 5 8999987421 122 3456899 99999999543
No 54
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.29 E-value=7.4e-12 Score=137.38 Aligned_cols=34 Identities=35% Similarity=0.503 Sum_probs=32.3
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
++||+|||||+||++||++|++.|++|+||||..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4899999999999999999999999999999974
No 55
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.29 E-value=2.8e-12 Score=140.83 Aligned_cols=35 Identities=37% Similarity=0.484 Sum_probs=32.7
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
++||+|||||+||++||+.|++.|++|+||||...
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 58999999999999999999999999999999743
No 56
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.28 E-value=1e-12 Score=144.12 Aligned_cols=35 Identities=34% Similarity=0.575 Sum_probs=32.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.++||+|||||+||++||+.|++.|.+|+||||..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 36999999999999999999999999999999764
No 57
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.28 E-value=1.3e-11 Score=127.38 Aligned_cols=111 Identities=24% Similarity=0.367 Sum_probs=74.5
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEE-EEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAV-ITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~l-iek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.+||+|||||+||++||+.|++.|++|+| +||... ||......
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~---------gG~~~~~~--------------------------- 47 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP---------GGQITSSS--------------------------- 47 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST---------TGGGGGCS---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC---------Cceeeeec---------------------------
Confidence 48999999999999999999999999999 999432 11110000
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
. +.. +++. .....+..+...+.+.+++.+++++.+
T Consensus 48 -----------------~--~~~----------~~~~---------------~~~~~~~~~~~~~~~~~~~~~v~~~~~- 82 (315)
T 3r9u_A 48 -----------------E--IEN----------YPGV---------------AQVMDGISFMAPWSEQCMRFGLKHEMV- 82 (315)
T ss_dssp -----------------C--BCC----------STTC---------------CSCBCHHHHHHHHHHHHTTTCCEEECC-
T ss_pred -----------------e--ecc----------CCCC---------------CCCCCHHHHHHHHHHHHHHcCcEEEEE-
Confidence 0 000 0000 001134577888888888899998887
Q ss_pred EEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 217 FALDLIIEN--GECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 217 ~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
.|+++ .++ +.+. + +..++. .+.++.||+|||..
T Consensus 83 ~v~~i-~~~~~~~~~-v---~~~~~~--~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 83 GVEQI-LKNSDGSFT-I---KLEGGK--TELAKAVIVCTGSA 117 (315)
T ss_dssp CEEEE-EECTTSCEE-E---EETTSC--EEEEEEEEECCCEE
T ss_pred EEEEE-ecCCCCcEE-E---EEecCC--EEEeCEEEEeeCCC
Confidence 88888 665 4432 1 123444 68999999999974
No 58
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.28 E-value=8.8e-11 Score=129.88 Aligned_cols=64 Identities=20% Similarity=0.067 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
...++..|.+.+.+.|++++.++.|+++..++ .+.++.+.+..+|+...++||.||+|||.++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 46889999999999999999999999999876 57788876655787667999999999998763
No 59
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.28 E-value=3.5e-12 Score=139.48 Aligned_cols=33 Identities=33% Similarity=0.445 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
++||+|||||+||++||++|++.|++|+||||.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 589999999999999999999999999999997
No 60
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.27 E-value=1.8e-12 Score=142.05 Aligned_cols=33 Identities=30% Similarity=0.512 Sum_probs=31.7
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
++||+|||||+||++||+.|++.|++|+||||.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 589999999999999999999999999999994
No 61
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.27 E-value=8.5e-13 Score=145.29 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=32.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.++||+|||||+||++||+.|++.|++|+||||..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999973
No 62
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.26 E-value=1.6e-11 Score=125.73 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.+||+|||||+||++||+.|++.|++|+|+||..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999999999999863
No 63
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.26 E-value=4.2e-11 Score=132.89 Aligned_cols=64 Identities=20% Similarity=0.116 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+.+.|.+.+++.|++++.++.|+++..+++++.|+.+.+ .+|+...+.||.||+|+|..+.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRN-TEGVELMAHARFIVDASGNRTRV 174 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSS
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEe-CCCCEEEEEcCEEEECCCcchHH
Confidence 57888999999999999999999999999999999988764 57876779999999999987744
No 64
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.26 E-value=3.2e-11 Score=131.50 Aligned_cols=59 Identities=10% Similarity=0.240 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEE---------------eCCEEEEEEEEEcCCCcEEEE--EcCeEEEcCCcc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLII---------------ENGECKGVIALCLEDGSIHRF--NANNTVLATGGY 256 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~---------------~~g~v~Gv~~~~~~~G~~~~i--~Ak~VIlAtGg~ 256 (661)
...++..|.+.+++.|++++.++.|++|.. +++++.++.. .+| .+ .|+.||+|+|++
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t---~~g---~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVL---SDG---TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEE---TTS---CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEe---CCC---EEeecCCEEEECCCcC
Confidence 468899999999999999999999999998 5666666653 556 37 999999999987
Q ss_pred cc
Q psy15089 257 GR 258 (661)
Q Consensus 257 ~~ 258 (661)
+.
T Consensus 254 s~ 255 (448)
T 3axb_A 254 SN 255 (448)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 65
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.26 E-value=1.8e-11 Score=130.30 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
...+...|.+.+++.|++++.++.|+++..+++.+ ++.. .+| .+.|+.||+|+|.++
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~-~v~~---~~g---~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEAL-FIKT---PSG---DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSE-EEEE---TTE---EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEE-EEEc---CCc---eEEcCEEEECCChhH
Confidence 46788999999999999999999999998877766 4432 444 489999999999865
No 66
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.25 E-value=3.3e-12 Score=140.58 Aligned_cols=36 Identities=36% Similarity=0.511 Sum_probs=33.2
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
..++||+|||||+||++||+.|++.|++|+||||..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 346899999999999999999999999999999954
No 67
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.25 E-value=4.7e-10 Score=116.27 Aligned_cols=36 Identities=42% Similarity=0.690 Sum_probs=32.9
Q ss_pred ccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 55 VDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 55 ~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
+..++||+|||||+||++||+.|++.|++|+|+||.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 345699999999999999999999999999999995
No 68
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.23 E-value=1.5e-11 Score=130.80 Aligned_cols=184 Identities=15% Similarity=0.063 Sum_probs=100.3
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCC-CCcccccCceEEccCCCCCCCHHHHH---HHHHhc-----
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTR-SHTVAAQGGINAALGNMEEDDWHWHM---YDTVKG----- 126 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~-~~s~~a~Gg~~~~~~~~~~d~~~~~~---~d~~~~----- 126 (661)
+.++||+|||||++|+++|++|+ +|++|+||||....+ +.|..+.|.+....+ .+...... .+....
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~ 82 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYG---TPQVRALTAASRAFFDNPPAGF 82 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSS---CHHHHHHHHHHHHHHHSCCTTS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccC---CHHHHHHHHHHHHHHHHhhhhh
Confidence 34689999999999999999999 599999999985444 444444443322221 11111111 111110
Q ss_pred -cC--C-------CCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHH
Q psy15089 127 -SD--W-------LGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHS 196 (661)
Q Consensus 127 -g~--~-------l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~ 196 (661)
.. + +...+. .+.....++++..+|+++.......+. ..++........++..... ........
T Consensus 83 ~~~~~~~~~g~l~~~~~~~----~~~~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~l~~~~~~~~~~~~~--~~~~~~~~ 155 (381)
T 3nyc_A 83 CEHPLLSPRPEMVVDFSDD----PEELRRQYESGKALVPQMRLLDAEQAC-SIVPVLRRDKVFGATYDPT--GADIDTDA 155 (381)
T ss_dssp CSSCSEEECCEEEECSSCC----HHHHHHHHHHHHHHCTTCEEECHHHHH-HHSTTBCGGGCCCEEEETT--CEEECHHH
T ss_pred CCcccccccceEEEechHH----HHHHHHHHHHHHHcCCCcEEeCHHHHH-HhCCCcccccceEEEEcCC--CceECHHH
Confidence 00 0 000000 112223344555667655332111100 0011000000000000000 00012368
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
++..|.+.+++.|+++++++.|++|..+++. ++|. ..+| .++|+.||+|+|+++
T Consensus 156 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~-~~V~---t~~g---~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 156 LHQGYLRGIRRNQGQVLCNHEALEIRRVDGA-WEVR---CDAG---SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHTTCEEESSCCCCEEEEETTE-EEEE---CSSE---EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEEeCCe-EEEE---eCCC---EEEcCEEEECCChhH
Confidence 8999999999999999999999999998876 3443 2444 589999999999876
No 69
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.22 E-value=1.6e-10 Score=129.02 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=45.3
Q ss_pred HHhCCcEEEEeEEEEEEEEe----CCEEEEEEEEEcCCCcEEEEEcC-eEEEcCCcccc
Q psy15089 205 SLRYDCNYFVEYFALDLIIE----NGECKGVIALCLEDGSIHRFNAN-NTVLATGGYGR 258 (661)
Q Consensus 205 a~~~gv~i~~~~~v~~l~~~----~g~v~Gv~~~~~~~G~~~~i~Ak-~VIlAtGg~~~ 258 (661)
..+.|++|+.++.|++|+.+ +++++||.+.+ .+|+.+.++|+ .||||+|+++.
T Consensus 237 ~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 237 YQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp TTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES-STTCEEEEEEEEEEEECSCTTTH
T ss_pred hcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe-cCCcEEEEEECCEEEEeCCccCC
Confidence 34568999999999999998 78999999864 47888889995 79999999874
No 70
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.22 E-value=9.9e-13 Score=145.17 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=32.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.+|||+|||||+||++||+.|++.|++|+||||..
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35999999999999999999999999999999963
No 71
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.21 E-value=2.4e-10 Score=122.35 Aligned_cols=56 Identities=20% Similarity=0.282 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..++..|.+.+++.|++++.++.|++|..+++.+. + .. .+| .|+|+.||+|+|+++
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~-v--~t-~~g---~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVS-V--TT-DRG---TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEE-E--EE-SSC---EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEE-E--EE-CCC---EEEcCEEEEcCCcCh
Confidence 57888899999999999999999999998877543 2 22 444 489999999999875
No 72
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.21 E-value=9.7e-11 Score=122.10 Aligned_cols=45 Identities=22% Similarity=0.353 Sum_probs=36.9
Q ss_pred CccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhc
Q psy15089 426 DKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEEN 472 (661)
Q Consensus 426 ~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~ 472 (661)
.|++|||||+||++ +.++|.+|.|. .+..++.+|+.||+.|.+++
T Consensus 280 ~t~vpGv~aaGDaa-~~v~g~~rmGp-~~g~mi~SG~~AAe~I~~~l 324 (326)
T 3fpz_A 280 YAGVDNMYFAGMEV-AELDGLNRMGP-TFGAMALSGVHAAEQILKHF 324 (326)
T ss_dssp CTTSBTEEECTHHH-HHHHTCCBCCS-CCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHh-ccccCCCcCch-HHHHHHHHHHHHHHHHHHHh
Confidence 49999999999976 56888888764 24456778999999999876
No 73
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.20 E-value=1.1e-11 Score=134.53 Aligned_cols=50 Identities=10% Similarity=-0.007 Sum_probs=37.4
Q ss_pred HhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 206 LRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 206 ~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
++.+++++.++.|+.+..+...+. ..+..+++...+.+|.+|||||+...
T Consensus 68 ~~~~i~~~~~~~V~~id~~~~~~~---~~~~~~~~~~~~~yd~lVIATGs~p~ 117 (437)
T 4eqs_A 68 DRKQITVKTYHEVIAINDERQTVS---VLNRKTNEQFEESYDKLILSPGASAN 117 (437)
T ss_dssp HHHCCEEEETEEEEEEETTTTEEE---EEETTTTEEEEEECSEEEECCCEEEC
T ss_pred HhcCCEEEeCCeEEEEEccCcEEE---EEeccCCceEEEEcCEEEECCCCccc
Confidence 456899999999998876655443 33345677778999999999997643
No 74
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.18 E-value=7.2e-10 Score=104.76 Aligned_cols=107 Identities=25% Similarity=0.297 Sum_probs=74.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHHH
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHY 138 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~~ 138 (661)
+||+|||||++|+.+|..|++.|.+|+|+|+....-..+ .++.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~------------------------------~~~~~------ 45 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV------------------------------SRVPN------ 45 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC------------------------------SCCCC------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc------------------------------hhhhc------
Confidence 799999999999999999999999999999874110000 00000
Q ss_pred HHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEEE
Q psy15089 139 MTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFA 218 (661)
Q Consensus 139 ~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v 218 (661)
..+++ ....+..+.+.+.+.+++.|++++.+ .|
T Consensus 46 -------------~~~~~---------------------------------~~~~~~~~~~~l~~~~~~~gv~v~~~-~v 78 (180)
T 2ywl_A 46 -------------YPGLL---------------------------------DEPSGEELLRRLEAHARRYGAEVRPG-VV 78 (180)
T ss_dssp -------------STTCT---------------------------------TCCCHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred -------------cCCCc---------------------------------CCCCHHHHHHHHHHHHHHcCCEEEeC-EE
Confidence 00000 00123577788888888999999999 99
Q ss_pred EEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 219 LDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 219 ~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
+++..+++.+ .+. ..+| .+.|+.||+|+|.
T Consensus 79 ~~i~~~~~~~-~v~---~~~g---~i~ad~vI~A~G~ 108 (180)
T 2ywl_A 79 KGVRDMGGVF-EVE---TEEG---VEKAERLLLCTHK 108 (180)
T ss_dssp CEEEECSSSE-EEE---CSSC---EEEEEEEEECCTT
T ss_pred EEEEEcCCEE-EEE---ECCC---EEEECEEEECCCC
Confidence 9998765532 122 2555 4899999999993
No 75
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.17 E-value=1.8e-10 Score=129.42 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...|.+.+++.|++++.++.|+++..+++.+++|.+.+ +|+...+.|+.||.|+|..+
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRR--GGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEE--TTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEec--CCceEEEEcCEEEECCCCcc
Confidence 57888899999999999999999999988777777777643 67666799999999999765
No 76
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.16 E-value=5e-11 Score=130.54 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=32.4
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
++||+|||||+||++||..|++.|.+|+||||..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999974
No 77
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.15 E-value=2.5e-10 Score=123.14 Aligned_cols=61 Identities=15% Similarity=0.015 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...|.+.+++.|++++.++.|+++..+++.+. +.+.+ .+|+...+.|+.||+|+|..+
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~-v~v~~-~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSV-TTIED-INGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEE-EEEEE-TTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEE-EEEEc-CCCCEEEEEcCEEEECCCCch
Confidence 57888999999889999999999999998876543 33333 678877899999999999765
No 78
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.15 E-value=4e-12 Score=140.61 Aligned_cols=34 Identities=29% Similarity=0.450 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
++||+|||||+||++||++|++.|++|+||||..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999973
No 79
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.13 E-value=2.4e-10 Score=134.25 Aligned_cols=183 Identities=14% Similarity=0.106 Sum_probs=103.7
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCCC--CCCcccccCceEEccCCCCCCCH-HHHH---HHHHhc-cC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFPT--RSHTVAAQGGINAALGNMEEDDW-HWHM---YDTVKG-SD 128 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~~--~~~s~~a~Gg~~~~~~~~~~d~~-~~~~---~d~~~~-g~ 128 (661)
.++||+|||||++|+++|+.|+++|. +|+||||.... ++++..+ +|+.... ..+.. .... .+.... ..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~-~G~~~~~---~~~~~~~~l~~~s~~~~~~l~~ 78 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHA-PGLVFQT---NPSKTMASFAKYTVEKLLSLTE 78 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTC-CCEECCC---CSCHHHHHHHHHHHHHHHHCEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeC-CceeecC---CCCHHHHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999998 99999998753 3333333 3333211 11111 1110 011110 00
Q ss_pred -----C--------CCCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeec--cCCc
Q psy15089 129 -----W--------LGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAV--ADRT 193 (661)
Q Consensus 129 -----~--------l~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~--~~~~ 193 (661)
+ ..+++.... .....+++..+|+++......... ..++........+ ..+.. ....
T Consensus 79 ~~~~~~~~~G~l~~~~~~~~~~~----l~~~~~~~~~~G~~~~~l~~~e~~-~~~p~l~~~~~~g----g~~~~~~g~v~ 149 (830)
T 1pj5_A 79 DGVSCFNQVGGLEVATTETRLAD----LKRKLGYAAAWGIEGRLLSPAECQ-ELYPLLDGENILG----GLHVPSDGLAS 149 (830)
T ss_dssp TTEESEECCCEEEEESSHHHHHH----HHHHHHHHHHHTCCCEEECHHHHH-HHCTTSCGGGCCE----EEEETTCEEEC
T ss_pred hCCCCeeecCcEEEEeCHHHHHH----HHHHHHHHHHcCCCeEEECHHHHH-HhCccCCccceEE----EEEECCCceEc
Confidence 0 012222221 223344556677765432111100 0011000000000 00000 0012
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
...++..|.+.+++.|++++.++.|++|..+++++.+|.+ .+| .+.|+.||+|+|+++.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t---~~G---~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQT---ADG---VIPADIVVSCAGFWGA 208 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE---TTE---EEECSEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEE---CCc---EEECCEEEECCccchH
Confidence 3688899999999999999999999999998888877754 455 4899999999998764
No 80
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.13 E-value=1.7e-10 Score=128.80 Aligned_cols=52 Identities=25% Similarity=0.401 Sum_probs=45.0
Q ss_pred HhCCcEEEEeEEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEc-CeEEEcCCcccc
Q psy15089 206 LRYDCNYFVEYFALDLIIE--NGECKGVIALCLEDGSIHRFNA-NNTVLATGGYGR 258 (661)
Q Consensus 206 ~~~gv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A-k~VIlAtGg~~~ 258 (661)
.+.|++|+.++.|++|+.+ +++++||.+.+ .+|+.+.++| |.||||+|+++.
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~-~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVT-AAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEE-TTSCEEEEEEEEEEEECSHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe-CCCcEEEEEeeeEEEEcccccCC
Confidence 3568999999999999999 78999999876 4588888999 789999999863
No 81
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.13 E-value=2.4e-11 Score=134.37 Aligned_cols=34 Identities=26% Similarity=0.221 Sum_probs=32.2
Q ss_pred cccEEEECCcHHHHHHHHHhHHC---CCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAE---GFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~---G~~V~liek~~ 91 (661)
++||+|||||+||++||+.|++. |++|+||||..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 99999999975
No 82
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.12 E-value=9.3e-10 Score=121.48 Aligned_cols=157 Identities=19% Similarity=0.208 Sum_probs=91.5
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
..++||+|||||++|+++|+.|+++|.+|+||||........ . +.. +. +
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~---r-~~~--l~-----------------------~-- 57 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGES---R-GLG--FT-----------------------A-- 57 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCC---C-SEE--EC-----------------------H--
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC---C-cce--EC-----------------------H--
Confidence 346899999999999999999999999999999975432211 0 111 00 0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCC-CCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEE
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGK-GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFV 214 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~-g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~ 214 (661)
..++.|..+|+.-............+++..+.+.. ....+... ......+.+.|.+.+++.|++++.
T Consensus 58 ---------~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~l~~~L~~~~~~~gv~v~~ 125 (500)
T 2qa1_A 58 ---------RTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFGVLEGAWQAAK---TVPQSVTETHLEQWATGLGADIRR 125 (500)
T ss_dssp ---------HHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEGGGSTTGGGCEE---EEEHHHHHHHHHHHHHHTTCEEEE
T ss_pred ---------HHHHHHHHCCCHHHHHhccccccccccceecccccCCCCCCcee---ecCHHHHHHHHHHHHHHCCCEEEC
Confidence 11222333443210000000000001111111000 00000000 012357888899999999999999
Q ss_pred eEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 215 EYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 215 ~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
+++++++..+++.|. +.+.+ .+| ...++|+.||.|+|+.+.
T Consensus 126 ~~~v~~i~~~~~~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 126 GHEVLSLTDDGAGVT-VEVRG-PEG-KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp TCEEEEEEEETTEEE-EEEEE-TTE-EEEEEESEEEECCCTTCH
T ss_pred CcEEEEEEEcCCeEE-EEEEc-CCC-CEEEEeCEEEECCCcchH
Confidence 999999999887665 44443 344 457999999999998763
No 83
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.12 E-value=4.1e-11 Score=135.32 Aligned_cols=51 Identities=12% Similarity=0.031 Sum_probs=38.9
Q ss_pred HHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 204 QSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 204 ~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
.+++.+++++.++.|+++..+++.+. +.+..+|+...+.++.+|+|||+..
T Consensus 102 ~~~~~gi~v~~~~~V~~id~~~~~v~---v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 102 MSKRFNLDIRVLSEVVKINKEEKTIT---IKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp HHHHTTCEEECSEEEEEEETTTTEEE---EEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHhcCcEEEECCEEEEEECCCCEEE---EeecCCCCEEEEeCCEEEECCCCCC
Confidence 34567999999999999987766543 3344567767799999999999744
No 84
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.12 E-value=4.6e-10 Score=118.88 Aligned_cols=182 Identities=10% Similarity=0.179 Sum_probs=97.6
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCc-ccccCceEEc-cCCCCCCCHHH------HHHHHHhccC-
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHT-VAAQGGINAA-LGNMEEDDWHW------HMYDTVKGSD- 128 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s-~~a~Gg~~~~-~~~~~~d~~~~------~~~d~~~~g~- 128 (661)
++||+|||||++|+++|+.|+++|++|+||||.....+.+ ....+++... .+. ....... .+.+....+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGE-GEKYVPLVLRAQMLWDELSRHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTT-CGGGHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCC-CchHHHHHHHHHHHHHHHHHhCCC
Confidence 4899999999999999999999999999999986543322 1111112111 110 0100100 1111110000
Q ss_pred --C------C----CCHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeec---cCCc
Q psy15089 129 --W------L----GDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAV---ADRT 193 (661)
Q Consensus 129 --~------l----~~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~---~~~~ 193 (661)
. + .+.+.. ....+.+..+|+++........ ...+++...... ....+. ....
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~-------~~~~~~~~~~g~~~~~l~~~~~-~~~~p~~~~~~~-----~~~~~~~~~g~~~ 147 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFL-------ANVAHSAEQWQLNVEKLDAQGI-MARWPEIRVPDN-----YIGLFETDSGFLR 147 (372)
T ss_dssp SCSEECCCEEEEEETTCHHH-------HHHHHHHHHTTCCEEEEEHHHH-HHHCTTCCCCTT-----EEEEEESSCEEEE
T ss_pred ccceeeeceEEEeCCCcHHH-------HHHHHHHHHcCCCcEecCHHHH-HhhCCCccCCCC-----ceEEEeCCCcEEc
Confidence 0 0 011111 1223445556665432211100 001111000000 000000 0112
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccC
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAY 260 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~ 260 (661)
...++..|.+.+++.|++++.++.|+++..+++.+ .+. ..+|+ +.|+.||+|+|+++...
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~-~v~---~~~g~---~~a~~vV~a~G~~s~~l 207 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGV-TIE---TADGE---YQAKKAIVCAGTWVKDL 207 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSE-EEE---ESSCE---EEEEEEEECCGGGGGGT
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEE-EEE---ECCCe---EEcCEEEEcCCccHHhh
Confidence 35788999999999999999999999998876653 232 25553 89999999999987544
No 85
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.12 E-value=1.9e-10 Score=127.78 Aligned_cols=114 Identities=23% Similarity=0.304 Sum_probs=76.0
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
..+||+|||||+||++||+.|++.|.+|+|+|+. .||.....
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~----------~GG~~~~~---------------------------- 252 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER----------FGGQVLDT---------------------------- 252 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS----------TTGGGTTC----------------------------
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC----------CCCccccc----------------------------
Confidence 4689999999999999999999999999999863 12211000
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
.+++. + .+ .....+..+...+.+.+++.|++++.++
T Consensus 253 ----------------~~~~~-------~-----~~----------------~~~~~~~~l~~~l~~~~~~~gv~v~~~~ 288 (521)
T 1hyu_A 253 ----------------VDIEN-------Y-----IS----------------VPKTEGQKLAGALKAHVSDYDVDVIDSQ 288 (521)
T ss_dssp ----------------SCBCC-------B-----TT----------------BSSBCHHHHHHHHHHHHHTSCEEEECSC
T ss_pred ----------------ccccc-------c-----CC----------------CCCCCHHHHHHHHHHHHHHcCCEEEcCC
Confidence 00000 0 00 0001235677788888888999999999
Q ss_pred EEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 217 FALDLIIEN--GECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 217 ~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
.|+.+..+. +....+. ..+|+ .+.++.||+|||+..
T Consensus 289 ~v~~i~~~~~~~~~~~V~---~~~g~--~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 289 SASKLVPAATEGGLHQIE---TASGA--VLKARSIIIATGAKW 326 (521)
T ss_dssp CEEEEECCSSTTSCEEEE---ETTSC--EEEEEEEEECCCEEE
T ss_pred EEEEEEeccCCCceEEEE---ECCCC--EEEcCEEEECCCCCc
Confidence 999986531 2111122 25665 488999999999754
No 86
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.10 E-value=3.9e-10 Score=120.22 Aligned_cols=180 Identities=15% Similarity=0.234 Sum_probs=98.1
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCC--CCcccccCceEEccCCCCCCCHHH------HHHHHHhc-c-
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTR--SHTVAAQGGINAALGNMEEDDWHW------HMYDTVKG-S- 127 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~--~~s~~a~Gg~~~~~~~~~~d~~~~------~~~d~~~~-g- 127 (661)
++||+|||||++|+++|+.|+++|.+|+||||....+ +.|..+.|.+....+. ....... .+.+.... +
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGE-GREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTT-CGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcC-CchHHHHHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999986654 4443322222211110 0011110 11111110 1
Q ss_pred CC--------CC---CHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeecc---CCc
Q psy15089 128 DW--------LG---DQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVA---DRT 193 (661)
Q Consensus 128 ~~--------l~---~~~~~~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~---~~~ 193 (661)
.. +. +.+. ....++++..+|+++.......+. ..+++..... .....+.. ...
T Consensus 82 ~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~l~~~~~~-~~~p~~~~~~-----~~~~~~~~~~~~~~ 148 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAF-------VAETMEAAKEHSLTVDLLEGDEIN-KRWPGITVPE-----NYNAIFEPNSGVLF 148 (389)
T ss_dssp CCEECCCEEEEEETTCCHH-------HHHHHHHHHHTTCCCEEEETHHHH-HHSTTCCCCT-----TEEEEEETTCEEEE
T ss_pred cceeecceEEEcCCCchHH-------HHHHHHHHHHcCCCcEEcCHHHHH-HhCCCcccCC-----CceEEEeCCCcEEe
Confidence 00 00 1111 122334555667665322111110 0111100000 00000000 012
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
...++..|.+.+++.|++++.++.|+++..+++.+ .+. ..+| .+.|+.||+|+|.++.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~-~v~---~~~g---~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSV-KIE---TANG---SYTADKLIVSMGAWNS 206 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCE-EEE---ETTE---EEEEEEEEECCGGGHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeE-EEE---eCCC---EEEeCEEEEecCccHH
Confidence 36788999999999999999999999999876643 232 2344 4899999999998754
No 87
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.10 E-value=5.6e-11 Score=129.65 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=32.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.++||+|||||+||++||++|++.|.+|+||||.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3589999999999999999999999999999997
No 88
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.09 E-value=8.6e-12 Score=136.11 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.4
Q ss_pred cccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~ 91 (661)
.+||+|||||+||++||..|++. |.+|+|+|+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 37999999999999999999998 78999999974
No 89
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.09 E-value=1.2e-09 Score=121.70 Aligned_cols=166 Identities=17% Similarity=0.097 Sum_probs=92.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||||||||++|+++|+.|++.|.+|+||||......... ..++ .+...
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~--~~~l---------------------------~~~~~ 54 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPR--AAGQ---------------------------NPRTM 54 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCC--SCCB---------------------------CHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCc--cceE---------------------------CHHHH
Confidence 468999999999999999999999999999999754322111 0011 01111
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccC----------CCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHH
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRT----------TDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSL 206 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~----------~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~ 206 (661)
+.+-+. ...+.+.+.+.++... ..|................... .............+...|.+.++
T Consensus 55 ~~l~~l--Gl~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~L~~~a~ 131 (535)
T 3ihg_A 55 ELLRIG--GVADEVVRADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEP-CTPAGWAMLSQDKLEPILLAQAR 131 (535)
T ss_dssp HHHHHT--TCHHHHHHSCCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGG-GCSCCCBCCCHHHHHHHHHHHHH
T ss_pred HHHHHc--CCHHHHHhhCCCcccccceeeeEEeccCCceeeecccccccccccccc-CCCCcccccCHHHHHHHHHHHHH
Confidence 111000 0123344455543221 1111100000000000000000 00000111234678889999999
Q ss_pred hCCcEEEEeEEEEEEEEeCC----EEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 207 RYDCNYFVEYFALDLIIENG----ECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 207 ~~gv~i~~~~~v~~l~~~~g----~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
+.|++++++++|+++..+++ .+. +...+ .++ ...++|+.||.|+|+.+
T Consensus 132 ~~gv~i~~~~~v~~i~~~~~~~~~~v~-v~~~~-~~~-~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 132 KHGGAIRFGTRLLSFRQHDDDAGAGVT-ARLAG-PDG-EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HTTCEEESSCEEEEEEEECGGGCSEEE-EEEEE-TTE-EEEEEEEEEEECCCTTC
T ss_pred hCCCEEEeCCEEEEEEECCCCccccEE-EEEEc-CCC-eEEEEeCEEEECCCCcc
Confidence 99999999999999998875 543 33333 233 46799999999999876
No 90
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.09 E-value=1.2e-09 Score=120.52 Aligned_cols=156 Identities=20% Similarity=0.208 Sum_probs=91.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||+|||||++|+++|+.|+++|.+|+||||........ . +.. +.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~---r-~~~--l~--------------------------- 57 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGES---R-GLG--FT--------------------------- 57 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCC---C-SEE--EC---------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC---c-eeE--EC---------------------------
Confidence 45899999999999999999999999999999975432211 0 111 00
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCC-CCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEe
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGK-GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVE 215 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~-g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~ 215 (661)
+..++.|..+|+.-............+++..+.+.. ....+... ......+.+.|.+.+++.|++++.+
T Consensus 58 -------~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~l~~~L~~~~~~~gv~v~~~ 127 (499)
T 2qa2_A 58 -------ARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDFGVLEGAHYGVK---AVPQSTTESVLEEWALGRGAELLRG 127 (499)
T ss_dssp -------HHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEGGGSTTCCCEEE---EEEHHHHHHHHHHHHHHTTCEEEES
T ss_pred -------HHHHHHHHHCCCHHHHHhccccccceecceecccccCCCCCCceE---ecCHHHHHHHHHHHHHhCCCEEEcC
Confidence 011223333444211000000000001111111000 00000000 1123578889999999999999999
Q ss_pred EEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 216 YFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 216 ~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
++++++..+++.|. +.+.+ .+| ...++|+.||.|+|+.+.
T Consensus 128 ~~v~~i~~~~~~v~-v~~~~-~~g-~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 128 HTVRALTDEGDHVV-VEVEG-PDG-PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp CEEEEEEECSSCEE-EEEEC-SSC-EEEEEEEEEEECCCTTCH
T ss_pred CEEEEEEEeCCEEE-EEEEc-CCC-cEEEEeCEEEEccCcccH
Confidence 99999998877654 44433 344 457999999999998763
No 91
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.09 E-value=4.3e-10 Score=117.23 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=31.5
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEe
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITK 89 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek 89 (661)
..+||+|||||+||+++|+.|++.|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 458999999999999999999999999999998
No 92
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.07 E-value=5.2e-10 Score=125.30 Aligned_cols=157 Identities=19% Similarity=0.116 Sum_probs=87.5
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||+|||||++|+++|+.|++.|.+|+||||......... ..++ . +..+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r--~~~l-------~--------------------~~s~ 98 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDR--AGAL-------H--------------------IRTV 98 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSS--CCCB-------C--------------------HHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCce--EEEE-------C--------------------HHHH
Confidence 468999999999999999999999999999999754322111 0111 0 0000
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCc---ccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQ---SLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYF 213 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~---~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~ 213 (661)
+.+.. ....+.+...+..... .. +++. .+.+.... .............+.+.|.+.+++.|++|+
T Consensus 99 ~~l~~--lGl~~~l~~~~~~~~~----~~----~~~~~~~~~~~~~~~--~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~ 166 (570)
T 3fmw_A 99 ETLDL--RGLLDRFLEGTQVAKG----LP----FAGIFTQGLDFGLVD--TRHPYTGLVPQSRTEALLAEHAREAGAEIP 166 (570)
T ss_dssp HHHHT--TTCHHHHTTSCCBCSB----CC----BTTBCTTCCBGGGSC--CSCCSBBCCCHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHH--cCChHHHHhcCcccCC----ce----eCCcccccccccccC--CCCCeeEEeCHHHHHHHHHHHHHhCCCEEE
Confidence 00000 0011222222322210 00 1111 00000000 000000111235788889999988899999
Q ss_pred EeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 214 VEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 214 ~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
.++.|+++..+++.+. +.+.+ .+|+ ..++|+.||.|+|+.+
T Consensus 167 ~~~~v~~l~~~~~~v~-v~~~~-~~G~-~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 167 RGHEVTRLRQDAEAVE-VTVAG-PSGP-YPVRARYGVGCDGGRS 207 (570)
T ss_dssp BSCEEEECCBCSSCEE-EEEEE-TTEE-EEEEESEEEECSCSSC
T ss_pred eCCEEEEEEEcCCeEE-EEEEe-CCCc-EEEEeCEEEEcCCCCc
Confidence 9999999988776554 33322 4553 4699999999999876
No 93
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.07 E-value=1.3e-10 Score=124.89 Aligned_cols=57 Identities=21% Similarity=0.185 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEE---------EEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFAL---------DLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~---------~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
...++..|.+.+++.|+++++++.|+ +|..+++++ ++.. .+| .+.||.||+|+|.++
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v-~v~~---~~g---~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQ-IVVH---ETR---QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC--------CB---CCE---EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeE-EEEE---CCc---EEECCEEEECCCccH
Confidence 35788999999999999999999999 888776665 4432 333 589999999999875
No 94
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.06 E-value=9.8e-10 Score=122.12 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=33.4
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
..++||+|||||+||++||++|++.|++|+|||+..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 346899999999999999999999999999999975
No 95
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.06 E-value=3.5e-10 Score=118.21 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=32.0
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..+||+|||||+||++||+.|++.|++|+|+|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4589999999999999999999999999999975
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.05 E-value=1.6e-09 Score=106.93 Aligned_cols=57 Identities=19% Similarity=0.190 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhC-CcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRY-DCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...|.+.+++. |++++ ++.|+++..+++++.++.. .+|+ .+.|+.||+|||.++
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~---~~g~--~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRT---WEGP--PARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEE---TTSC--CEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEE---CCCC--EEECCEEEECCCCCh
Confidence 46777888888887 99988 5799999998888877754 5665 489999999999754
No 97
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.03 E-value=5.8e-10 Score=123.04 Aligned_cols=139 Identities=19% Similarity=0.162 Sum_probs=87.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
..+||+|||||++|+++|+.|++.|.+|+||||....+... ..+ . . +
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~-----~~~--~---~--------------------~--- 137 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHN-----VLH--L---W--------------------P--- 137 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCC-----EEE--C---C--------------------H---
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCC-----ccc--C---C--------------------h---
Confidence 46899999999999999999999999999999975432210 000 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeE
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEY 216 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~ 216 (661)
..++.+..+|+... .+.+ ....+ . ......+...|.+.+++.|++++.++
T Consensus 138 --------~~~~~l~~~g~~~~---~~~~-----~~~~~--------~------~~~~~~l~~~L~~~~~~~gv~v~~~~ 187 (497)
T 2bry_A 138 --------FTIHDLRALGAKKF---YGRF-----CTGTL--------D------HISIRQLQLLLLKVALLLGVEIHWGV 187 (497)
T ss_dssp --------HHHHHHHTTTHHHH---CTTT-----TCTTC--------C------EEEHHHHHHHHHHHHHHTTCEEEESC
T ss_pred --------hHHHHHHHcCCccc---cccc-----ccccc--------c------cCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 01122222232100 0000 00000 0 01235788888888988999999999
Q ss_pred EEEEEEEe--CCEEEEEEEEEcC-CCcEEEEEcCeEEEcCCccccc
Q psy15089 217 FALDLIIE--NGECKGVIALCLE-DGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 217 ~v~~l~~~--~g~v~Gv~~~~~~-~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
.|+++..+ ++...++.+.+ . +|+...+.|+.||+|+|+.+..
T Consensus 188 ~v~~i~~~~~~~~~~~v~~~~-~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 188 KFTGLQPPPRKGSGWRAQLQP-NPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp EEEEEECCCSTTCCBEEEEES-CCCHHHHTCCBSEEEECCCTTCCC
T ss_pred EEEEEEEecCCCCEEEEEEEE-CCCCCEEEEEcCEEEECCCCCccc
Confidence 99999874 24445555432 2 5533358999999999987743
No 98
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.99 E-value=4.5e-09 Score=117.44 Aligned_cols=164 Identities=16% Similarity=0.164 Sum_probs=91.1
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAI 136 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~ 136 (661)
.++||||||||++|+++|+.|++.|.+|+||||......... ..+++ +..+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~--~~~l~---------------------------~~~~ 75 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPR--VGTIG---------------------------PRSM 75 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCC--CCEEC---------------------------HHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCc--eeeeC---------------------------HHHH
Confidence 468999999999999999999999999999999754322110 11110 1111
Q ss_pred HHHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcc---cccCC-----CC-ccceeeeccCCcHHHHHHHHHHHHHh
Q psy15089 137 HYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQS---LKYGK-----GG-QAHRCCAVADRTGHSLLHTLYGQSLR 207 (661)
Q Consensus 137 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~---~~~~~-----g~-~~~r~~~~~~~~g~~l~~~L~~~a~~ 207 (661)
+.+-.. ...+.+.+.+.++..... ..+.....|.. +.+.. .. ..+.... ......+.+.|.+.+.+
T Consensus 76 ~~l~~l--Gl~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~l~~~L~~~a~~ 150 (549)
T 2r0c_A 76 ELFRRW--GVAKQIRTAGWPGDHPLD-AAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDA--ICPQHWLAPLLAEAVGE 150 (549)
T ss_dssp HHHHHT--TCHHHHHTSSCCTTSBCC-EEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCE--ECCHHHHHHHHHHHHGG
T ss_pred HHHHHc--CChHHHHhhcCCcccccc-eEEeccCCCceeEeecccccccccccCCCCCccc--ccCHHHHHHHHHHHHHH
Confidence 111000 011233344544421100 00000011100 00000 00 0000000 01224677788888877
Q ss_pred CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 208 YDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
. ++++++++++..+++.|. +.+.+..+|+...++||.||.|+|+.+.
T Consensus 151 ~---v~~~~~v~~~~~~~~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 151 R---LRTRSRLDSFEQRDDHVR-ATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp G---EECSEEEEEEEECSSCEE-EEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred h---cccCcEEEEEEEeCCEEE-EEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 6 889999999998877665 4444434576667999999999998763
No 99
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.99 E-value=7e-10 Score=123.64 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=43.3
Q ss_pred HhCCcEEEEeEEEEEEEEe----C-CEEEEEEEEEcCCC-cEEEEEc-CeEEEcCCcccc
Q psy15089 206 LRYDCNYFVEYFALDLIIE----N-GECKGVIALCLEDG-SIHRFNA-NNTVLATGGYGR 258 (661)
Q Consensus 206 ~~~gv~i~~~~~v~~l~~~----~-g~v~Gv~~~~~~~G-~~~~i~A-k~VIlAtGg~~~ 258 (661)
.+.+++|+.++.|++|+.+ + ++++||.+.+ .+| +.+.++| |.||||+|+++.
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~-~~g~~~~~v~A~kEVILsAGai~S 277 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE-QEGAPTTTVCAKKEVVLSAGSVGT 277 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEES-STTSCCEEEEEEEEEEECCHHHHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE-CCCceEEEEEeeeEEEEecCCcCC
Confidence 4668999999999999998 4 6899999874 345 6778999 889999998763
No 100
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.99 E-value=5.9e-10 Score=119.21 Aligned_cols=63 Identities=16% Similarity=0.063 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+.+.|.+.+.+.|++++.++.|+++..+++..+.+... .+|+...++||.||.|+|..+..
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~--~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFE--RDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEE--ETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEe--cCCcEEEEEeCEEEECCCCCcHH
Confidence 4677888888888899999999999998764322234432 36765679999999999987753
No 101
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.98 E-value=2.9e-10 Score=122.59 Aligned_cols=35 Identities=40% Similarity=0.581 Sum_probs=32.2
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCc--EEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFK--TAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~--V~liek~~ 91 (661)
..+||+|||||+||++||..|++.|.+ |+|+|+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCC
Confidence 358999999999999999999999987 99999974
No 102
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.97 E-value=3.9e-09 Score=113.48 Aligned_cols=161 Identities=16% Similarity=0.080 Sum_probs=88.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCc-EEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHH
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFK-TAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDA 135 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~-V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~ 135 (661)
.++||+|||||++|+++|+.|++.|.+ |+|+||....+.. ..|+... +. .
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~----g~g~~l~-----~~--------------------~ 53 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPL----GVGINIQ-----PA--------------------A 53 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCC----SCEEEEC-----HH--------------------H
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccc----eeEEEEC-----hH--------------------H
Confidence 358999999999999999999999999 9999997543221 1122111 00 0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCccc----CCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHh-CC-
Q psy15089 136 IHYMTREAPKAVIELENYGMPFSR----TTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLR-YD- 209 (661)
Q Consensus 136 ~~~~~~~~~~~i~~l~~~Gv~f~~----~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~-~g- 209 (661)
.+.+... ...+.+...+.+... ..+|........+....+. .+ . .......+.+.|.+.+.+ .|
T Consensus 54 ~~~l~~l--g~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~-~---~~i~r~~l~~~L~~~~~~~~g~ 123 (410)
T 3c96_A 54 VEALAEL--GLGPALAATAIPTHELRYIDQSGATVWSEPRGVEAGNA----YP-Q---YSIHRGELQMILLAAVRERLGQ 123 (410)
T ss_dssp HHHHHHT--TCHHHHHHHSEEECEEEEECTTSCEEEEEECGGGGTCS----SC-E---EEEEHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHC--CChHHHHhhCCCcceEEEEcCCCCEEeeccCCccccCC----CC-e---eeeeHHHHHHHHHHHHHhhCCC
Confidence 0000000 011222223332211 1122211110000000000 00 0 001225788888888876 36
Q ss_pred cEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 210 CNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 210 v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
++++.++.|+++.. ++.+. +.+.+..+|+...+.||.||.|+|..+.
T Consensus 124 ~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 124 QAVRTGLGVERIEE-RDGRV-LIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp TSEEESEEEEEEEE-ETTEE-EEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred cEEEECCEEEEEec-CCccE-EEEecCCCCCceEEecCEEEECCCccch
Confidence 68999999999988 44343 3333323576567999999999998774
No 103
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.97 E-value=1.5e-09 Score=115.66 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=31.3
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
++.|+|||||+||++||..|.+.+.+|+|+|+..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~ 42 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEK 42 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCC
Confidence 4789999999999999999988889999999874
No 104
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.97 E-value=2.4e-09 Score=114.60 Aligned_cols=59 Identities=17% Similarity=0.045 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhC-CcEEEEeEEEEEEEEeCCEEE-EEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 195 HSLLHTLYGQSLRY-DCNYFVEYFALDLIIENGECK-GVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 195 ~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~~g~v~-Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
..+.+.|.+.+++. |++++.++.|+++..+++.++ .+. ..+|+ .+.||.||+|+|..+.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~---~~~g~--~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVR---LNDGR--VLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEE---ETTSC--EEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEE---ECCCC--EEECCEEEECCCCChH
Confidence 57888999999888 999999999999998877654 232 25676 4899999999998774
No 105
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.95 E-value=1.5e-10 Score=126.35 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=31.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~ 91 (661)
.||+|||||+||++||..|++. |.+|+||||..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5999999999999999999998 89999999975
No 106
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.94 E-value=6e-10 Score=122.53 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=30.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~ 91 (661)
.||+|||||+||++||+.|++. |.+|+|||+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 71 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGE 71 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 6999999999999999999996 89999999974
No 107
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.93 E-value=3.6e-10 Score=126.97 Aligned_cols=49 Identities=16% Similarity=0.089 Sum_probs=37.3
Q ss_pred HhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 206 LRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 206 ~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
++.+++++.++.|+++..+++.+ .+.+..+|+...+.++.||+|||+..
T Consensus 69 ~~~~i~~~~~~~V~~id~~~~~v---~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 69 ARFNVEVRVKHEVVAIDRAAKLV---TVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp HHHCCEEETTEEEEEEETTTTEE---EEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HhcCcEEEECCEEEEEECCCCEE---EEEecCCCCeEEEECCEEEECCCCCC
Confidence 34689999999999997766654 33444567767799999999999843
No 108
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.92 E-value=1.1e-08 Score=113.80 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=43.5
Q ss_pred hCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 207 RYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 207 ~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
+.+++++.++.|+.++.++++++|+.+.+ .++...+.||.||||+|+++.
T Consensus 223 r~nl~v~~~~~v~~i~~~~~~a~gv~~~~--~~~~~~~~a~~VILsAGai~S 272 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEGNQVRSLEVVG--RQGSAEVFADQIVLCAGALES 272 (526)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEEE--TTEEEEEEEEEEEECSHHHHH
T ss_pred CCCeEEEeCCEEEEEEecCCeEEEEEEEe--cCceEEEeecceEEcccccCC
Confidence 45899999999999999999999999875 455677899999999998764
No 109
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.91 E-value=2.1e-08 Score=108.15 Aligned_cols=57 Identities=19% Similarity=0.238 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+.+.|.+.++++|++|++++.|++|..++++++||.. +|+ .+.||.||+|+|.+.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~----~g~--~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA----DDR--IHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE----TTE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE----CCE--EEECCEEEECCCHHH
Confidence 568899999999999999999999999999999888764 354 489999999999754
No 110
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.91 E-value=2.5e-08 Score=112.01 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=45.5
Q ss_pred HHhCCcEEEEeEEEEEEEEeC----CEEEEEEEEEcCCCcEEEEEc-CeEEEcCCcccc
Q psy15089 205 SLRYDCNYFVEYFALDLIIEN----GECKGVIALCLEDGSIHRFNA-NNTVLATGGYGR 258 (661)
Q Consensus 205 a~~~gv~i~~~~~v~~l~~~~----g~v~Gv~~~~~~~G~~~~i~A-k~VIlAtGg~~~ 258 (661)
+.+.|++|+.++.|++|+.++ ++++||.+.+ .+|+.+.|+| |.||||+|+++.
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCTTTH
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe-CCCcEEEEEecccEEEccCCCCC
Confidence 345689999999999999874 5899999876 5788888999 999999999864
No 111
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.91 E-value=1.4e-09 Score=119.86 Aligned_cols=34 Identities=24% Similarity=0.162 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHhHHCC---CcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEG---FKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G---~~V~liek~~ 91 (661)
++||+|||||+||++||..|++.| .+|+|||+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 589999999999999999999988 9999999874
No 112
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.91 E-value=4.1e-09 Score=111.30 Aligned_cols=39 Identities=28% Similarity=0.511 Sum_probs=35.1
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTR 94 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~ 94 (661)
..++||+|||||++|+++|++|++.|.+|+||||.....
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPED 42 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCC
Confidence 346899999999999999999999999999999976544
No 113
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.88 E-value=1.6e-08 Score=108.46 Aligned_cols=56 Identities=14% Similarity=0.030 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
..+.+.|.+.+.+ +++++++.|+++..+++.+. +. ..+|+ .+.|+.||.|+|..+.
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~-v~---~~~g~--~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDADGVT-VW---FTDGS--SASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEE-EE---ETTSC--EEEESEEEECCCTTCS
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEE-EE---EcCCC--EEeeCEEEECCCcChH
Confidence 5788888888876 89999999999999887543 22 26676 5899999999998764
No 114
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.88 E-value=1.7e-08 Score=111.39 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
..|.+.|.+.++++|++|++++.|++|+.++++++||.. .+|+. +.||+||.+++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~---~~g~~--~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHL---EDGRR--FLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE---TTSCE--EECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEe---cCCcE--EEcCEEEECCCHH
Confidence 578899999999999999999999999999999999875 67764 8999999998853
No 115
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.87 E-value=2.6e-09 Score=118.80 Aligned_cols=54 Identities=19% Similarity=0.255 Sum_probs=44.0
Q ss_pred HHHHhCCcEEEEeEEEEEEEEeCC---EEEEEEEEEcCCCcEEEE---EcCeEEEcCCccc
Q psy15089 203 GQSLRYDCNYFVEYFALDLIIENG---ECKGVIALCLEDGSIHRF---NANNTVLATGGYG 257 (661)
Q Consensus 203 ~~a~~~gv~i~~~~~v~~l~~~~g---~v~Gv~~~~~~~G~~~~i---~Ak~VIlAtGg~~ 257 (661)
..+++.|++|+.++.|++|+.+++ +++||.+.+ .+|+.+.+ .+|.||||+|+++
T Consensus 202 ~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 202 NKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp GGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHH
T ss_pred hhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe-CCCceEEEEeccCCEEEEcCcccC
Confidence 345567999999999999999863 899999875 46776556 5699999999985
No 116
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.87 E-value=1.8e-08 Score=114.58 Aligned_cols=64 Identities=14% Similarity=0.069 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhCCc--EEEEeEEEEEEEEeCC---EEEEEEEEEc---CCCcEEEEEcCeEEEcCCcccc
Q psy15089 195 HSLLHTLYGQSLRYDC--NYFVEYFALDLIIENG---ECKGVIALCL---EDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~g---~v~Gv~~~~~---~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
..+.+.|.+.+++.|+ +++.++.++++..+++ ..+.+.+.+. .+|+...++||.||.|+|+.+.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 5788899999999886 9999999999988752 2334554431 2576667999999999998774
No 117
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.86 E-value=1.7e-08 Score=112.43 Aligned_cols=51 Identities=25% Similarity=0.386 Sum_probs=44.0
Q ss_pred hCCcEEEEeEEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcC-eEEEcCCccc
Q psy15089 207 RYDCNYFVEYFALDLIIEN-GECKGVIALCLEDGSIHRFNAN-NTVLATGGYG 257 (661)
Q Consensus 207 ~~gv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~Ak-~VIlAtGg~~ 257 (661)
+.|++|+.++.|++|+.++ ++++||.+.+..+|+...|+|+ .||||+|+++
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~ 273 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAID 273 (546)
T ss_dssp CTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccC
Confidence 5689999999999999987 8999999875333877889997 9999999975
No 118
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.85 E-value=1.5e-08 Score=107.71 Aligned_cols=149 Identities=20% Similarity=0.125 Sum_probs=85.4
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHH
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIH 137 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~ 137 (661)
.+||+|||||++|+++|+.|++.|.+|+|+||....+.. ..|+... +.... .+..-
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~----~~~~~l~-----~~~~~-----~l~~~---------- 66 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF----GAGIYLW-----HNGLR-----VLEGL---------- 66 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC----SSEEEEE-----HHHHH-----HHHHT----------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC----CceEEeC-----ccHHH-----HHHHc----------
Confidence 589999999999999999999999999999997544321 1122111 00000 00000
Q ss_pred HHHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccc-cCC-CCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEe
Q psy15089 138 YMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLK-YGK-GGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVE 215 (661)
Q Consensus 138 ~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~-~~~-g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~ 215 (661)
...+.+...+.+.... .+ ... |.... ... +. + . .......+.+.|.+.+.+.|++++.+
T Consensus 67 -------g~~~~~~~~~~~~~~~---~~-~~~--g~~~~~~~~~~~--~-~---~~~~r~~l~~~L~~~~~~~gv~i~~~ 127 (379)
T 3alj_A 67 -------GALDDVLQGSHTPPTY---ET-WMH--NKSVSKETFNGL--P-W---RIMTRSHLHDALVNRARALGVDISVN 127 (379)
T ss_dssp -------TCHHHHHTTCBCCSCE---EE-EET--TEEEEEECGGGC--C-E---EEEEHHHHHHHHHHHHHHTTCEEESS
T ss_pred -------CCHHHHHhhCCCccce---EE-EeC--CceeeeccCCCC--c-e---EEECHHHHHHHHHHHHHhcCCEEEeC
Confidence 0011222233222100 00 000 10000 000 00 0 0 00123578889999999899999999
Q ss_pred EEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 216 YFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 216 ~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
+.|+++.. ++ .+.. .+|+ .+.||.||+|+|..+.
T Consensus 128 ~~v~~i~~-~~---~v~~---~~g~--~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 128 SEAVAADP-VG---RLTL---QTGE--VLEADLIVGADGVGSK 161 (379)
T ss_dssp CCEEEEET-TT---EEEE---TTSC--EEECSEEEECCCTTCH
T ss_pred CEEEEEEe-CC---EEEE---CCCC--EEEcCEEEECCCccHH
Confidence 99999977 44 2322 5665 4899999999998763
No 119
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.85 E-value=1.4e-08 Score=112.37 Aligned_cols=59 Identities=15% Similarity=0.081 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIE-NGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+...|.+.+++.|++++.+ .|+++..+ ++.++++.. .+|+ .+.|+.||.|+|..+..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT---KQHG--EISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE---SSSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE---CCCC--EEEcCEEEECCCcchHH
Confidence 578889999999999999999 99999885 466666654 5665 48999999999987754
No 120
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.84 E-value=7.4e-10 Score=116.51 Aligned_cols=47 Identities=28% Similarity=0.316 Sum_probs=39.6
Q ss_pred cEEEECCcHHHHHHHHHhHHCC------CcEEEEEecCCCCCCcccccCceEE
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEG------FKTAVITKLFPTRSHTVAAQGGINA 106 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G------~~V~liek~~~~~~~s~~a~Gg~~~ 106 (661)
||+|||||++|+++|+.|+++| .+|+||||.....+.|..+.|.++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~ 54 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQP 54 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeec
Confidence 8999999999999999999998 8999999987666666665555543
No 121
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.84 E-value=1.6e-09 Score=116.44 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=30.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC--cEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF--KTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~~ 91 (661)
.||+|||||+||++||..|++.|. +|+|||+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 489999999999999999999998 899999974
No 122
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.82 E-value=1.8e-09 Score=116.28 Aligned_cols=33 Identities=30% Similarity=0.465 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCc--EEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFK--TAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~--V~liek~~ 91 (661)
.||+|||||+||++||..|++.|.+ |+|+|+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~ 37 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEP 37 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCC
Confidence 4899999999999999999999987 99999874
No 123
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.82 E-value=2.1e-08 Score=113.33 Aligned_cols=51 Identities=18% Similarity=0.153 Sum_probs=44.7
Q ss_pred CCcEEEEeEEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 208 YDCNYFVEYFALDLIIEN--GECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
.|++|+.++.|++|+.++ ++++||.+.+..+|+...+.|+.||+|+|....
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s 325 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHN 325 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCC
Confidence 489999999999999875 389999998866888888999999999998664
No 124
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.80 E-value=5.8e-08 Score=105.59 Aligned_cols=65 Identities=17% Similarity=0.087 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCc-EEEEEcCeEEEcCCcccccC
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGS-IHRFNANNTVLATGGYGRAY 260 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~-~~~i~Ak~VIlAtGg~~~~~ 260 (661)
..+.+.|.+.+++.+..+++++.|+++..+++.+. |.+.+..+|+ ...+.++.||+|||.++..+
T Consensus 115 ~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~-V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~ 180 (447)
T 2gv8_A 115 HTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWV-VTYKGTKAGSPISKDIFDAVSICNGHYEVPY 180 (447)
T ss_dssp HHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEE-EEEEESSTTCCEEEEEESEEEECCCSSSSBC
T ss_pred HHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEE-EEEeecCCCCeeEEEEeCEEEECCCCCCCCC
Confidence 56777787778777888889999999987776532 4443333465 45689999999999876443
No 125
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.79 E-value=3.7e-08 Score=109.82 Aligned_cols=59 Identities=19% Similarity=0.266 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIEN-GECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+...|.+.+++.|++++.+ .|+++..++ +.++++.. .+|+ .+.|+.||+|+|..+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~---~~g~--~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLT---KEGR--TLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE---TTSC--EECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEE---CCCc--EEEeCEEEECCCCchhh
Confidence 578889999999999999999 899998854 55666553 5664 48999999999987754
No 126
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.78 E-value=4.9e-08 Score=109.04 Aligned_cols=59 Identities=19% Similarity=0.137 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhC-CcEEEEeEEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLRY-DCNYFVEYFALDLIIE-NGECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+.+.|.+.+++. |++++.+ .|+++..+ ++.++++.. .+|+ .+.|+.||+|+|..+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~---~~G~--~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRT---ATGR--VFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEE---TTSC--EEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEE---CCCC--EEECCEEEECCCCchhh
Confidence 57888999999988 9999999 99999875 466666654 5664 48999999999987754
No 127
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.76 E-value=7.1e-08 Score=103.12 Aligned_cols=146 Identities=23% Similarity=0.220 Sum_probs=83.9
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHH
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIH 137 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~ 137 (661)
.+||+|||||++|+++|+.|++.|.+|+|+||....... ..+|+. + .
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~---~~~g~~--l-----------------------~----- 51 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG---FGTGIV--V-----------------------Q----- 51 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC---CSCEEE--C-----------------------C-----
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc---cccccc--c-----------------------C-----
Confidence 589999999999999999999999999999997532110 112221 1 0
Q ss_pred HHHHHHHHHHHHHHHCCCCccc---CCCCcccccccCCcccccCCCCccceeeeccC-CcHHHHHHHHHHHHHhCCcEEE
Q psy15089 138 YMTREAPKAVIELENYGMPFSR---TTDGKIYQRAFGGQSLKYGKGGQAHRCCAVAD-RTGHSLLHTLYGQSLRYDCNYF 213 (661)
Q Consensus 138 ~~~~~~~~~i~~l~~~Gv~f~~---~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~-~~g~~l~~~L~~~a~~~gv~i~ 213 (661)
+..++.|..+|+.-.. ...+..+.....|... .+...... ..-..+.+.|.+.+ .|++++
T Consensus 52 ------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~ 115 (397)
T 2vou_A 52 ------PELVHYLLEQGVELDSISVPSSSMEYVDALTGERV--------GSVPADWRFTSYDSIYGGLYELF--GPERYH 115 (397)
T ss_dssp ------HHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCCEE--------EEEECCCCEEEHHHHHHHHHHHH--CSTTEE
T ss_pred ------hhHHHHHHHcCCccccccccccceEEEecCCCCcc--------ccccCcccccCHHHHHHHHHHhC--CCcEEE
Confidence 1122334445543200 0000000000011100 00000000 11135666666654 589999
Q ss_pred EeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 214 VEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 214 ~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
.++.|+++..+++.+. +. ..+|+ .+.|+.||.|+|..+.
T Consensus 116 ~~~~v~~i~~~~~~v~-v~---~~~g~--~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 116 TSKCLVGLSQDSETVQ-MR---FSDGT--KAEANWVIGADGGASV 154 (397)
T ss_dssp TTCCEEEEEECSSCEE-EE---ETTSC--EEEESEEEECCCTTCH
T ss_pred cCCEEEEEEecCCEEE-EE---ECCCC--EEECCEEEECCCcchh
Confidence 9999999988776543 22 25675 4899999999998764
No 128
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.76 E-value=4e-08 Score=107.30 Aligned_cols=63 Identities=13% Similarity=0.049 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEe--CCEEEEEEEEE-cCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIE--NGECKGVIALC-LEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~--~g~v~Gv~~~~-~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...|...+++.++++.+++.|+++..+ +++..++.+.. ..+|+...+.++.||+|||+..
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTP 192 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEE
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCC
Confidence 567777777777889999999999999876 24543333321 1335566799999999999743
No 129
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.75 E-value=2.2e-07 Score=100.02 Aligned_cols=55 Identities=9% Similarity=0.139 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+.+.|.+.+++.|++|++++.|++|..+++++ + . .+|+ .+.||.||+|+|...
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v--V--~--~~g~--~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV--Y--T--RDNE--EYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE--E--E--TTCC--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE--E--E--eCCc--EEEeCEEEECCCHHH
Confidence 5788999999999999999999999999888876 3 1 4565 489999999999643
No 130
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.74 E-value=2.3e-08 Score=111.69 Aligned_cols=58 Identities=12% Similarity=0.175 Sum_probs=44.8
Q ss_pred HHHHHHh-CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcE---EEEEcCeEEEcCCcccc
Q psy15089 201 LYGQSLR-YDCNYFVEYFALDLIIENGECKGVIALCLEDGSI---HRFNANNTVLATGGYGR 258 (661)
Q Consensus 201 L~~~a~~-~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~---~~i~Ak~VIlAtGg~~~ 258 (661)
+++.+.+ .|++++.++.|++|+.++++++||.+.+..+|+. ..+.+|.||||+|+++.
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s 262 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT 262 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC
Confidence 4445554 5899999999999999989999998765335652 23378999999999763
No 131
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.73 E-value=1.1e-07 Score=105.77 Aligned_cols=59 Identities=10% Similarity=0.134 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHh-CCcEEEEeEEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 195 HSLLHTLYGQSLR-YDCNYFVEYFALDLIIEN-GECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 195 ~~l~~~L~~~a~~-~gv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
..+.+.|.+.+++ .|++++.+ .|+++..++ +.++++.. .+|+. +.|+.||.|+|..+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~---~~g~~--i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLIT---KQNGE--ISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEE---SSSCE--EECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEE---CCCCE--EEcCEEEECCCcchHH
Confidence 5788889999998 89999999 699998764 55556543 45553 8999999999987754
No 132
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.73 E-value=9.3e-08 Score=105.56 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=44.9
Q ss_pred HHHHHhC-CcEEEEeEEEEEEEEeC-C-EEEEEEEEEcCCC---cEEEEEcCeEEEcCCcccc
Q psy15089 202 YGQSLRY-DCNYFVEYFALDLIIEN-G-ECKGVIALCLEDG---SIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 202 ~~~a~~~-gv~i~~~~~v~~l~~~~-g-~v~Gv~~~~~~~G---~~~~i~Ak~VIlAtGg~~~ 258 (661)
+..+++. +++|+.++.|++|+.++ + +++||.+.+ .+| +...++|+.||||+|+++.
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD-TDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCccceeEEEeeCEEEEccCCCCC
Confidence 3445556 59999999999999985 4 899998865 456 5677999999999999853
No 133
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.73 E-value=6.1e-08 Score=103.67 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=33.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
.++||+|||||++|+++|+.|++.|.+|+|+||...
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 458999999999999999999999999999999754
No 134
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.71 E-value=7.9e-08 Score=109.57 Aligned_cols=35 Identities=40% Similarity=0.444 Sum_probs=32.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHH-----CCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVA-----EGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~-----~G~~V~liek~~ 91 (661)
.++||||||||++||++|+.|++ .|.+|+||||..
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 36899999999999999999999 999999999974
No 135
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.70 E-value=8.5e-08 Score=99.38 Aligned_cols=34 Identities=35% Similarity=0.539 Sum_probs=32.5
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..+||+|||||+||++||+.|++.|++|+||||.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 4689999999999999999999999999999997
No 136
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.70 E-value=1.3e-07 Score=106.82 Aligned_cols=51 Identities=33% Similarity=0.431 Sum_probs=38.5
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEE
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINA 106 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~ 106 (661)
...+||+|||||+||++||+.|++.|++|+|+|+......+..+..||.+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~ 155 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCV 155 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEe
Confidence 346899999999999999999999999999999843222222334566543
No 137
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.68 E-value=2.4e-07 Score=101.17 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHhCCcE--EEEeEEEEEEEEeCC--EEEEEEEEEcCCCcEEEEEcCeEEEcCCcccccC
Q psy15089 194 GHSLLHTLYGQSLRYDCN--YFVEYFALDLIIENG--ECKGVIALCLEDGSIHRFNANNTVLATGGYGRAY 260 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~--i~~~~~v~~l~~~~g--~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~~ 260 (661)
...+.+.|.+.+++.|++ +++++.|+.+..+++ .. -|.+.+..+|+...+.++.||+|||.++...
T Consensus 100 ~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 100 REVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred HHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 467888888888888987 889999999988764 33 2444443456656789999999999766443
No 138
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.68 E-value=5.3e-07 Score=92.56 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=39.9
Q ss_pred CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 208 YDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.|++++.++.++++..+++++.++.+.+..+|+...+.++.||+|+|
T Consensus 193 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp TTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 58999999999999877778888887765567777899999999998
No 139
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.66 E-value=1.3e-07 Score=102.49 Aligned_cols=57 Identities=9% Similarity=0.190 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEE-eCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLII-ENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~-~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
..+.+.|.+.+++.|++++.++.|++|.. ++++++||.. .+|+. +.|+.||.|+|-+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~---~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKS---SDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEE---TTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEE---CCCcE--EECCEEEECCCcc
Confidence 47899999999999999999999999999 6789998875 56764 8999999999843
No 140
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.66 E-value=1.7e-07 Score=96.29 Aligned_cols=56 Identities=20% Similarity=0.338 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...+.+.+.+.|++++. ..|+++..+++.+. +. ..+|+ .+.++.||+|||+.+
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~-v~---~~~g~--~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFV-IL---AEDGK--TFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEE-EE---ETTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEE-EE---EcCCC--EEECCEEEECCCCCC
Confidence 56777788888888999887 78888888776432 21 24565 488999999999754
No 141
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.66 E-value=9.5e-07 Score=90.68 Aligned_cols=48 Identities=4% Similarity=0.064 Sum_probs=39.4
Q ss_pred hCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 207 RYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 207 ~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+.||+++.++.++++..+++++.++...+..+|+...+.++.||+|+|
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 238 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVG 238 (311)
T ss_dssp CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEec
Confidence 368999999999999887677777776554477766799999999999
No 142
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.65 E-value=7.1e-08 Score=106.27 Aligned_cols=33 Identities=39% Similarity=0.659 Sum_probs=31.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHH-CCCcEEEEEe
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVA-EGFKTAVITK 89 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~-~G~~V~liek 89 (661)
.++||+|||||+||++||++|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 46999999999999999999999 9999999994
No 143
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.64 E-value=2.6e-07 Score=101.98 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=44.4
Q ss_pred HHHHHhC-CcEEEEeEEEEEEEEeC-C-EEEEEEEEEcCCC---cEEEEEcCeEEEcCCcccc
Q psy15089 202 YGQSLRY-DCNYFVEYFALDLIIEN-G-ECKGVIALCLEDG---SIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 202 ~~~a~~~-gv~i~~~~~v~~l~~~~-g-~v~Gv~~~~~~~G---~~~~i~Ak~VIlAtGg~~~ 258 (661)
+..+++. +++|+.++.|++|+.++ + +++||.+.+ .+| +...|+|+.||||+|+++.
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID-EQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCcccccEEEEeCEEEEccCccCC
Confidence 3444455 59999999999999986 5 899998864 356 3677999999999999853
No 144
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.64 E-value=9.4e-08 Score=99.41 Aligned_cols=38 Identities=29% Similarity=0.381 Sum_probs=34.1
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRS 95 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~ 95 (661)
.+||+|||||++|+++|+.|++.|.+|+||||....++
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg 39 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcc
Confidence 37999999999999999999999999999999865433
No 145
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.63 E-value=5.5e-08 Score=107.06 Aligned_cols=32 Identities=38% Similarity=0.616 Sum_probs=30.6
Q ss_pred cccEEEECCcHHHHHHHHHhHH-CCCcEEEEEe
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVA-EGFKTAVITK 89 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~-~G~~V~liek 89 (661)
++||+|||||+||++||++|++ .|++|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999994
No 146
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.62 E-value=1.1e-07 Score=99.31 Aligned_cols=37 Identities=27% Similarity=0.160 Sum_probs=33.2
Q ss_pred ccEEEECCcHHHHHHHHHhHH---CCCcEEEEEecCCCCC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVA---EGFKTAVITKLFPTRS 95 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~---~G~~V~liek~~~~~~ 95 (661)
+||+|||||++|+++|+.|++ .|++|+|+||....++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 599999999999999999999 9999999999764433
No 147
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.60 E-value=1.9e-07 Score=98.44 Aligned_cols=58 Identities=17% Similarity=0.291 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
+..+...+.+.+++.|++++.++.|+++..+++.+. + . ..+|+ +.++.||+|||.++.
T Consensus 87 ~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~-v--~-~~~g~---~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 87 GETYAEYLQVVANHYELNIFENTVVTNISADDAYYT-I--A-TTTET---YHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEE-E--E-ESSCC---EEEEEEEECCCSTTS
T ss_pred HHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEE-E--E-eCCCE---EEeCEEEECCCCCCc
Confidence 456777787888889999999999999987654322 2 2 24453 789999999998754
No 148
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.59 E-value=1.3e-07 Score=105.31 Aligned_cols=61 Identities=18% Similarity=0.161 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHhCCc--EEEEeEEEEEEEEeCC-EEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 194 GHSLLHTLYGQSLRYDC--NYFVEYFALDLIIENG-ECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~g-~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
+..+...+.+.+++.++ .+++++.|+++..+++ ...-+. ..+|+ .+.|+.||+|||.++..
T Consensus 98 ~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~---~~~G~--~i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 98 QPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVR---TDRGD--EVSARFLVVAAGPLSNA 161 (549)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEE---ETTCC--EEEEEEEEECCCSEEEC
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEE---ECCCC--EEEeCEEEECcCCCCCC
Confidence 46788888888888887 8899999999988764 122222 25676 48999999999976543
No 149
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.58 E-value=1.8e-06 Score=94.43 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-+|..+++.|.+|+++++.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 210 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFL 210 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEecc
Confidence 47999999999999999999999999999986
No 150
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.57 E-value=1.3e-07 Score=97.10 Aligned_cols=58 Identities=22% Similarity=0.218 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIEN--GECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+...+.+.+++.|++++.++.|+.+..+. +...-+. ..+|+ .+.++.||+|||...
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~---~~~g~--~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIE---TASGA--VLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEE---ETTSC--EEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEE---ECCCC--EEEeCEEEECcCCCc
Confidence 4677777778888899999998999886542 1111122 25664 488999999999864
No 151
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.57 E-value=1.4e-07 Score=103.44 Aligned_cols=35 Identities=37% Similarity=0.436 Sum_probs=32.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.++||+|||||+||++||+.|++.|.+|+|||+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999974
No 152
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.57 E-value=1.1e-07 Score=103.78 Aligned_cols=34 Identities=32% Similarity=0.499 Sum_probs=32.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.++||+|||||+||++||++|++.|++|+|||+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3589999999999999999999999999999997
No 153
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.56 E-value=2.2e-07 Score=103.28 Aligned_cols=61 Identities=16% Similarity=0.129 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHhCCc--EEEEeEEEEEEEEeCC-EEEEEEEEEcCCCcEEEEEcCeEEEcCCccccc
Q psy15089 194 GHSLLHTLYGQSLRYDC--NYFVEYFALDLIIENG-ECKGVIALCLEDGSIHRFNANNTVLATGGYGRA 259 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~g-~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~~ 259 (661)
+..+...|.+.+++.|+ .+.+++.|+++..+++ ....+. ..+|+ .+.|+.||+|||.++..
T Consensus 86 ~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~---~~~G~--~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 86 QPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVT---TDHGE--VYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEE---ETTSC--EEEEEEEEECCCSCCSB
T ss_pred HHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEE---EcCCC--EEEeCEEEECCcccccC
Confidence 46788888888888888 8999999999988764 222222 25676 48999999999976643
No 154
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=1.3e-07 Score=103.15 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=31.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.++||+|||||+||++||++|++.|.+|+|||+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 3589999999999999999999999999999994
No 155
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.53 E-value=3.4e-06 Score=92.03 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-+|..+++.|.+|+++++.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~ 198 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALE 198 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcC
Confidence 37999999999999999999999999999976
No 156
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.51 E-value=3.2e-06 Score=87.39 Aligned_cols=46 Identities=11% Similarity=0.185 Sum_probs=37.7
Q ss_pred CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 208 YDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.|++++.++.++++.. ++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 201 ~gv~i~~~~~v~~i~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQG-ADSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp TTEEEECSEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred CCceEecCCceEEEcc-CCcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 5899999999999876 466777877654578767799999999998
No 157
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.50 E-value=2.2e-06 Score=94.33 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 198 LHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 198 ~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
...+.+.+++.||+++.++.|+++..+++....+.. .+|+ .+.+|.||+|+|
T Consensus 238 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~---~~G~--~i~~D~vv~a~G 289 (495)
T 2wpf_A 238 REEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTF---ESGK--TLDVDVVMMAIG 289 (495)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEE---TTSC--EEEESEEEECSC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEE---CCCc--EEEcCEEEECCC
Confidence 344555667789999999999999876543233332 5675 489999999999
No 158
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.50 E-value=2.7e-06 Score=93.49 Aligned_cols=53 Identities=19% Similarity=0.132 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+.+.+.+.+++.||+++.++.|+++..+++....+.. .+|+ .+.++.||+|+|
T Consensus 233 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~---~~G~--~i~~D~vv~a~G 285 (490)
T 1fec_A 233 LRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVF---ESGA--EADYDVVMLAIG 285 (490)
T ss_dssp HHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEE---TTSC--EEEESEEEECSC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEE---CCCc--EEEcCEEEEccC
Confidence 3344556667889999999999999876543233332 5675 489999999999
No 159
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.50 E-value=3.4e-07 Score=94.46 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=31.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..+||+|||||+||++||+.|++.|++|+|+|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 4589999999999999999999999999999975
No 160
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.50 E-value=9.6e-07 Score=95.24 Aligned_cols=39 Identities=33% Similarity=0.422 Sum_probs=34.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCc
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHT 97 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s 97 (661)
+||+|||||++|++||+.|+++|.+|+|||+....+|.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRA 40 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCee
Confidence 799999999999999999999999999999966554433
No 161
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.46 E-value=7.4e-07 Score=99.29 Aligned_cols=37 Identities=35% Similarity=0.392 Sum_probs=33.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPT 93 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~ 93 (661)
.++||+|||||++|++||+.|++.|.+|+|+||....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV 51 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 3689999999999999999999999999999997544
No 162
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.46 E-value=7.8e-07 Score=97.20 Aligned_cols=35 Identities=29% Similarity=0.479 Sum_probs=32.7
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.++||+|||||+||++||++|++.|++|+|||+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 35899999999999999999999999999999973
No 163
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.45 E-value=9.6e-08 Score=95.10 Aligned_cols=38 Identities=29% Similarity=0.381 Sum_probs=34.6
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRS 95 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~ 95 (661)
++||+|||||||||+||+.|+++|++|+|+||....++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 48999999999999999999999999999999865543
No 164
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.43 E-value=2.8e-06 Score=90.70 Aligned_cols=32 Identities=28% Similarity=0.289 Sum_probs=28.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCC--CcEEEEEecC
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEG--FKTAVITKLF 91 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G--~~V~liek~~ 91 (661)
.|||||||+||++||.+|++.+ .+|+|||+..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 4999999999999999998865 5899999863
No 165
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.42 E-value=3.7e-07 Score=100.43 Aligned_cols=38 Identities=26% Similarity=0.280 Sum_probs=33.7
Q ss_pred ccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCC
Q psy15089 55 VDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPT 93 (661)
Q Consensus 55 ~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~ 93 (661)
....+||+|||||+||++||+.|++. ++|+|+|+....
T Consensus 105 ~~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~ 142 (493)
T 1y56_A 105 ERVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWL 142 (493)
T ss_dssp EEEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSS
T ss_pred ccccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCC
Confidence 34568999999999999999999999 999999997543
No 166
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.42 E-value=1.1e-06 Score=97.77 Aligned_cols=60 Identities=13% Similarity=0.061 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHhCCc--EEEEeEEEEEEEEeCC-EEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 194 GHSLLHTLYGQSLRYDC--NYFVEYFALDLIIENG-ECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~g-~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
+..+...+.+.+++.++ .+.+++.|+++..++. ...-+. ..+|+ .+.|+.||+|||.++.
T Consensus 86 ~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~---~~~G~--~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 86 QPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVT---LDNEE--VVTCRFLISATGPLSA 148 (545)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEE---ETTTE--EEEEEEEEECCCSCBC
T ss_pred HHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEE---ECCCC--EEEeCEEEECcCCCCC
Confidence 46777778777877777 7888999999987653 221222 25675 4899999999997654
No 167
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.41 E-value=2.4e-06 Score=92.27 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+.+.|.+.+++.|++++.++.|++|..+++++.|+.. +|+ .+.||.||+|+|.+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~----~g~--~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS----EGE--VARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE----TTE--EEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE----CCe--EEECCEEEECCCCCc
Confidence 478899999998999999999999999999998888652 454 489999999999664
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.41 E-value=1.7e-07 Score=102.18 Aligned_cols=34 Identities=35% Similarity=0.502 Sum_probs=32.1
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
++||+|||||+||++||+.|++.|++|+||||..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 3799999999999999999999999999999974
No 169
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.36 E-value=1.6e-06 Score=94.23 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCc-EEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFK-TAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~-V~liek~ 90 (661)
-.|+|||||..|+-+|..+.+.|.+ |+++++.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~ 297 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRR 297 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeC
Confidence 4799999999999999999999985 9999875
No 170
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.35 E-value=1.7e-05 Score=89.45 Aligned_cols=31 Identities=26% Similarity=0.256 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||||..|+-+|..+++.|.+|+++++.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 6999999999999999999999999999975
No 171
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.34 E-value=4.1e-06 Score=91.49 Aligned_cols=57 Identities=12% Similarity=-0.029 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+.+.|.+.+.+.|++|+.++.|++|..+++.+..|. .+++ .+.|+.||+|++...
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~----~~~~--~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVS----LRDS--SLEADHVISAIPASV 290 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEE----CSSC--EEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEE----ECCe--EEEcCEEEECCCHHH
Confidence 36888999999999999999999999988765433332 2343 389999999998643
No 172
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.31 E-value=4.3e-06 Score=89.09 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
-.|+|||||+|||++|+.|+++|.+|+|+||...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3699999999999999999999999999999753
No 173
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.30 E-value=7.2e-06 Score=97.96 Aligned_cols=31 Identities=19% Similarity=0.353 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|+|||||..|+-+|..+.+.|. +|+|+++.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~ 365 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRK 365 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEec
Confidence 79999999999999999999997 89999875
No 174
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.27 E-value=9.9e-07 Score=95.81 Aligned_cols=33 Identities=18% Similarity=0.146 Sum_probs=30.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~ 91 (661)
.||+|||||+||++||..|++. |.+|+|||+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 3899999999999999999998 89999999974
No 175
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.27 E-value=2.6e-06 Score=101.17 Aligned_cols=37 Identities=32% Similarity=0.384 Sum_probs=33.9
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
...+||||||+|+||++||+.|++.|++|+|||+...
T Consensus 126 ~~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~ 162 (965)
T 2gag_A 126 HVHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 3468999999999999999999999999999999754
No 176
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.26 E-value=1.6e-06 Score=94.81 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~ 91 (661)
.||+|||||+||++||..|++. |.+|+||||..
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 6999999999999999999998 89999999974
No 177
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.23 E-value=1.8e-05 Score=87.06 Aligned_cols=63 Identities=14% Similarity=0.088 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCC-------EEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 194 GHSLLHTLYGQSLRYDCNYFVEYFALDLIIENG-------ECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 194 g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g-------~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
..++.+.|...+++.+..+.++++|+++..++. ...-|.+.+..+|+...+.|+.||+|||+.
T Consensus 144 r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 144 RLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp HHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 367888888888888888999999999987542 123355666678888899999999999964
No 178
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.22 E-value=1.8e-06 Score=93.88 Aligned_cols=33 Identities=21% Similarity=0.160 Sum_probs=31.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~ 91 (661)
+||+|||||+||++||..|++. |.+|+|||+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMND 35 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 5899999999999999999998 99999999974
No 179
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.22 E-value=1.8e-05 Score=91.26 Aligned_cols=40 Identities=33% Similarity=0.365 Sum_probs=35.4
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRS 95 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~ 95 (661)
...+||+|||||++|++||+.|++.|++|+|+|+....++
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 3468999999999999999999999999999999765544
No 180
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.19 E-value=3.8e-05 Score=83.72 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 208 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARN 208 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEEC
Confidence 46999999999999999999999999999975
No 181
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.17 E-value=1.6e-06 Score=93.73 Aligned_cols=34 Identities=35% Similarity=0.593 Sum_probs=31.4
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC--cEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF--KTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~~ 91 (661)
.+||+|||||+||++||..|++.|. +|+|||+..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 4899999999999999999999998 799999863
No 182
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.14 E-value=4.8e-05 Score=87.16 Aligned_cols=40 Identities=28% Similarity=0.330 Sum_probs=35.3
Q ss_pred ccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCC
Q psy15089 55 VDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTR 94 (661)
Q Consensus 55 ~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~ 94 (661)
....+||+|||||+||++||+.|++.|++|+|+||....+
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 3456899999999999999999999999999999975443
No 183
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.14 E-value=1.5e-06 Score=93.15 Aligned_cols=33 Identities=27% Similarity=0.247 Sum_probs=30.8
Q ss_pred ccEEEECCcHHHHHHHHHhHH---CCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVA---EGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~---~G~~V~liek~~ 91 (661)
.||+|||||+||++||+.|++ .|.+|+|||+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 379999999999999999999 899999999974
No 184
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=2.5e-06 Score=90.07 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=30.4
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-.||+|||||+||++||..|++.| +|+|||+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCC
Confidence 469999999999999999999999 999999974
No 185
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.07 E-value=1.9e-06 Score=95.05 Aligned_cols=52 Identities=10% Similarity=0.051 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
..+.+.|.+.+.+.|+++..++.|+++..++++++ ..+|+. +.|+.||.+.-
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~------~~~G~~--~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVT------LQDGTT--IGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEEE------ETTSCE--EEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCEEE------EcCCCE--EECCEEEECCC
Confidence 46888898888888999999999999998877643 267764 88999998765
No 186
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.06 E-value=3.5e-06 Score=89.53 Aligned_cols=33 Identities=24% Similarity=0.158 Sum_probs=30.3
Q ss_pred cccEEEECCcHHHHHHHHHhHHCC--CcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEG--FKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G--~~V~liek~ 90 (661)
.+||+|||||+||++||+.|++.| .+|+|+|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 489999999999999999999998 468999986
No 187
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.99 E-value=3.9e-06 Score=91.19 Aligned_cols=57 Identities=16% Similarity=0.200 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIE--NGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+.+.|.+.+++.|++++.++.|++|..+ +++++||.. +|+ .+.||.||+|+|.++
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~----~g~--~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT----KLG--TFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE----TTE--EEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE----CCe--EEECCEEEECCCccc
Confidence 478899999999999999999999999998 888888763 354 489999999999763
No 188
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.98 E-value=5.2e-05 Score=82.41 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=36.1
Q ss_pred cCcccCCCCeEEeecCCCCcc-ccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhcC
Q psy15089 408 GGIPTNYKGQVLTHVNGQDKI-IHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENK 473 (661)
Q Consensus 408 GGi~vd~~~~vl~~d~~~~T~-ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~ 473 (661)
|||.+|..++ |+ +||+||+|||+. +..| .+..++..|+.+|.+++..+.
T Consensus 346 g~i~vn~~~r---------t~~~p~vya~Gd~~~-g~~~-------~i~~a~~~g~~aa~~i~~~l~ 395 (460)
T 1cjc_A 346 LGVVPNMEGR---------VVDVPGLYCSGWVKR-GPTG-------VITTTMTDSFLTGQILLQDLK 395 (460)
T ss_dssp TTBCCEETTE---------ETTCTTEEECTHHHH-CTTC-------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeECCCCc---------CcCCCCEEEEEeCCc-CCCc-------cHHHHHHHHHHHHHHHHHHHH
Confidence 5777787776 66 899999999873 3222 234677889999999987763
No 189
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.93 E-value=1.3e-05 Score=85.80 Aligned_cols=35 Identities=26% Similarity=0.266 Sum_probs=31.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC--cEEEEEecC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF--KTAVITKLF 91 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~~ 91 (661)
..+||+|||||+||++||..|++.|. +|+|+|+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 35899999999999999999999987 499999864
No 190
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.91 E-value=5.8e-05 Score=77.46 Aligned_cols=55 Identities=11% Similarity=0.061 Sum_probs=42.9
Q ss_pred HHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCC-CcEEEEEcCeEEEcCC
Q psy15089 200 TLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLED-GSIHRFNANNTVLATG 254 (661)
Q Consensus 200 ~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~-G~~~~i~Ak~VIlAtG 254 (661)
.+.+.+++.||+++.++.++++..+++++.++.+.+..+ |+...+.+|.||+|+|
T Consensus 189 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G 244 (320)
T 1trb_A 189 RLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIG 244 (320)
T ss_dssp HHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSC
T ss_pred HHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeC
Confidence 344556678999999999999987777888887754333 6555789999999999
No 191
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.89 E-value=1.2e-05 Score=86.84 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=31.0
Q ss_pred ccEEEECCcHHHHHHHHHhHH---CCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVA---EGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~---~G~~V~liek~~ 91 (661)
.||+|||||+||++||..|++ .|.+|+|||+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 599999999999999999999 899999999874
No 192
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.82 E-value=0.00012 Score=78.09 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 196 SLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 196 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+.+.+.+.+++.||+++.++.+.++..+++++.++.. .+|+ .+.||.||+|+|
T Consensus 185 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~---~dG~--~i~aD~Vv~a~G 238 (404)
T 3fg2_P 185 EISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVL---SDGN--TLPCDLVVVGVG 238 (404)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE---TTSC--EEECSEEEECCC
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEe---CCCC--EEEcCEEEECcC
Confidence 34455666677889999999999999988888887764 6676 488999999999
No 193
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.80 E-value=0.00014 Score=77.90 Aligned_cols=54 Identities=15% Similarity=0.093 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 196 SLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 196 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+.+.+.+.+++.||+++.++.|+++..+++++.++.. .+|+ .+.||.||+|+|
T Consensus 195 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l---~dG~--~i~aD~Vv~a~G 248 (415)
T 3lxd_A 195 ALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRM---QDGS--VIPADIVIVGIG 248 (415)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEE---SSSC--EEECSEEEECSC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEe---CCCC--EEEcCEEEECCC
Confidence 34455556677889999999999999888888877765 5675 488999999999
No 194
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.79 E-value=0.0002 Score=78.20 Aligned_cols=101 Identities=11% Similarity=0.062 Sum_probs=72.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHHH
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHY 138 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~~ 138 (661)
-.|+|||||..|+-+|..+++.|.+|+|+++...... . .+
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-----------------~~------ 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-----------------S-----------------MD------ 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-----------------S-----------------SC------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-----------------c-----------------cC------
Confidence 4799999999999999999999999999998631100 0 00
Q ss_pred HHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEEE
Q psy15089 139 MTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFA 218 (661)
Q Consensus 139 ~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v 218 (661)
..+...+.+.+++.||+++.++.+
T Consensus 224 --------------------------------------------------------~~~~~~l~~~l~~~gv~i~~~~~v 247 (478)
T 1v59_A 224 --------------------------------------------------------GEVAKATQKFLKKQGLDFKLSTKV 247 (478)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHTTCEEECSEEE
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHCCCEEEeCCEE
Confidence 123344555667789999999999
Q ss_pred EEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 219 LDLIIE-NGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 219 ~~l~~~-~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
+++..+ ++..+.+...+..+|+...+.++.||+|+|-
T Consensus 248 ~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 248 ISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred EEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 999863 3433445544333455556899999999993
No 195
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.79 E-value=5e-06 Score=89.71 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=30.9
Q ss_pred ccEEEECCcHHHHHHHHHhHH--CCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVA--EGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~--~G~~V~liek~~ 91 (661)
.||+|||||+||++||..|++ .|.+|+|||+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 589999999999999999999 789999999973
No 196
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.78 E-value=1.2e-05 Score=85.74 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=36.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHC-CCcEEEEEecCCCCCCc
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAE-GFKTAVITKLFPTRSHT 97 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~-G~~V~liek~~~~~~~s 97 (661)
.++||+|||||++||+||..|++. |.+|+|+|+....+|.+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 468999999999999999999999 99999999987655543
No 197
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.75 E-value=0.00025 Score=77.13 Aligned_cols=99 Identities=16% Similarity=0.104 Sum_probs=71.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHHH
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHY 138 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~~ 138 (661)
-.|+|||||..|+-+|..+++.|.+|+|+|+...... . .+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-----------------~~------ 209 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-----------------Q-----------------GD------ 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------T-----------------SC------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----------------c-----------------cC------
Confidence 4799999999999999999999999999998631100 0 00
Q ss_pred HHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEEE
Q psy15089 139 MTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFA 218 (661)
Q Consensus 139 ~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v 218 (661)
..+.+.+.+.+++.||+++.++.+
T Consensus 210 --------------------------------------------------------~~~~~~l~~~l~~~gV~i~~~~~v 233 (464)
T 2eq6_A 210 --------------------------------------------------------PETAALLRRALEKEGIRVRTKTKA 233 (464)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHTTCEEECSEEE
T ss_pred --------------------------------------------------------HHHHHHHHHHHHhcCCEEEcCCEE
Confidence 123344555667789999999999
Q ss_pred EEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 219 LDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 219 ~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+++..+++.+. +...+..+|+...+.+|.||+|+|
T Consensus 234 ~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 234 VGYEKKKDGLH-VRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp EEEEEETTEEE-EEEEETTCCSCEEEEESEEEECSC
T ss_pred EEEEEeCCEEE-EEEeecCCCceeEEEcCEEEECCC
Confidence 99987766532 333211116655689999999999
No 198
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.74 E-value=0.00015 Score=74.38 Aligned_cols=50 Identities=10% Similarity=0.155 Sum_probs=40.9
Q ss_pred HHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 205 SLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 205 a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+++.|++++.++.++++..+++++.++.+.+..+|+...+.+|.||+|+|
T Consensus 200 l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (319)
T 3cty_A 200 IKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVG 249 (319)
T ss_dssp HHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCC
T ss_pred HhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeC
Confidence 34678999999999999877677888877654578766799999999998
No 199
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.73 E-value=1.9e-05 Score=83.68 Aligned_cols=41 Identities=27% Similarity=0.344 Sum_probs=35.9
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
...+||+|||||++|++||+.|++.|.+|+|+||....+|.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCc
Confidence 34689999999999999999999999999999997655443
No 200
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.72 E-value=2.1e-05 Score=86.94 Aligned_cols=40 Identities=30% Similarity=0.356 Sum_probs=35.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
..+||+|||||+|||+||..|+++|.+|+|+|+....+|.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 3579999999999999999999999999999997655543
No 201
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.71 E-value=2.3e-05 Score=85.84 Aligned_cols=41 Identities=32% Similarity=0.477 Sum_probs=36.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCc
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHT 97 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s 97 (661)
..+||+|||||+|||+||+.|+++|.+|+|+||....+|.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 45799999999999999999999999999999987666643
No 202
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.70 E-value=2.4e-05 Score=84.74 Aligned_cols=40 Identities=38% Similarity=0.411 Sum_probs=35.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
.++||+|||||++||+||+.|++.|.+|+|+|+....++.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 4689999999999999999999999999999997655544
No 203
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.67 E-value=0.00027 Score=72.81 Aligned_cols=49 Identities=8% Similarity=-0.025 Sum_probs=42.2
Q ss_pred CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 208 YDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
.||+++.++.++++..+++++.++.+.+..+|+...+.+|.||+|+|-.
T Consensus 222 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 222 EKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp TTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 4999999999999988888888888877667777789999999999954
No 204
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.67 E-value=3.1e-05 Score=83.11 Aligned_cols=40 Identities=23% Similarity=0.335 Sum_probs=35.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCC-CcEEEEEecCCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEG-FKTAVITKLFPTRSH 96 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G-~~V~liek~~~~~~~ 96 (661)
..+||+|||||++||+||+.|++.| .+|+|+|+....+|.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCc
Confidence 3579999999999999999999999 899999997665543
No 205
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.66 E-value=2.4e-05 Score=82.45 Aligned_cols=38 Identities=29% Similarity=0.260 Sum_probs=34.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
+||+|||||++|++||.+|+++|.+|+|+|+....+|.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 79999999999999999999999999999997655544
No 206
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.65 E-value=2.8e-05 Score=85.86 Aligned_cols=40 Identities=28% Similarity=0.323 Sum_probs=35.8
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCC-CcEEEEEecCCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEG-FKTAVITKLFPTRSH 96 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G-~~V~liek~~~~~~~ 96 (661)
..+||+|||||+|||+||..|+++| .+|+|+|+....||.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 3589999999999999999999999 999999998765554
No 207
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00057 Score=74.03 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=71.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHHH
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHY 138 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~~ 138 (661)
-+|+|||||..|+-+|..+++.|.+|+|+++...... . .+
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------~-----------------~~------ 210 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-----------------G-----------------FE------ 210 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------------T-----------------SC------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----------------c-----------------cC------
Confidence 5799999999999999999999999999998631100 0 00
Q ss_pred HHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEEE
Q psy15089 139 MTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFA 218 (661)
Q Consensus 139 ~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v 218 (661)
..+.+.+.+.+++.|++++.++.+
T Consensus 211 --------------------------------------------------------~~~~~~l~~~l~~~gv~i~~~~~v 234 (455)
T 1ebd_A 211 --------------------------------------------------------KQMAAIIKKRLKKKGVEVVTNALA 234 (455)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHTTCEEEESEEE
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHCCCEEEeCCEE
Confidence 123344555667789999999999
Q ss_pred EEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 219 LDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 219 ~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
+++..+++.+. +... .+|+...+.++.||+|+|-
T Consensus 235 ~~i~~~~~~~~-v~~~--~~g~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 235 KGAEEREDGVT-VTYE--ANGETKTIDADYVLVTVGR 268 (455)
T ss_dssp EEEEEETTEEE-EEEE--ETTEEEEEEESEEEECSCE
T ss_pred EEEEEeCCeEE-EEEE--eCCceeEEEcCEEEECcCC
Confidence 99987766532 3322 2444456899999999993
No 208
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.64 E-value=0.00023 Score=74.45 Aligned_cols=51 Identities=18% Similarity=0.145 Sum_probs=41.9
Q ss_pred HHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 203 GQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 203 ~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+..++.|++++.++.++++..+++++.++.+. ..+|+...+.+|.||+|+|
T Consensus 210 ~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 210 RARANGTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIG 260 (360)
T ss_dssp HHHHHTSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCC
T ss_pred HHhhcCceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCC
Confidence 33456799999999999999888888787765 3577666799999999999
No 209
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.63 E-value=0.0002 Score=77.55 Aligned_cols=34 Identities=35% Similarity=0.412 Sum_probs=31.5
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
..+|+|||||++|+.+|..+++.|.+|+|+|+..
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 182 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 182 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc
Confidence 4689999999999999999999999999999863
No 210
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.63 E-value=2e-05 Score=85.73 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=34.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCC------CcEEEEEecCCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEG------FKTAVITKLFPTRS 95 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G------~~V~liek~~~~~~ 95 (661)
.+||+|||||++||+||++|+++| .+|+|+|+....++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 479999999999999999999999 99999999755443
No 211
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.63 E-value=3.9e-05 Score=80.66 Aligned_cols=39 Identities=26% Similarity=0.237 Sum_probs=34.7
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec-CCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL-FPTRS 95 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~-~~~~~ 95 (661)
..+||+|||||++||+||+.|+++|.+|+|+|+. ...+|
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 4579999999999999999999999999999998 54433
No 212
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.62 E-value=0.00042 Score=75.92 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+.+.+.+.+++.||+++.++.++++..+++.+. +...+..+|+...+.+|.||+|+|
T Consensus 241 ~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 241 VAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAK-VTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEE-EEEEETTSCCCEEEEESEEEECCC
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEE-EEEEecCCCceEEEEcCEEEEeeC
Confidence 344455566778999999999999988776543 444443346555789999999999
No 213
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.61 E-value=3e-05 Score=83.55 Aligned_cols=34 Identities=29% Similarity=0.278 Sum_probs=31.8
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.+||+|||||++|+++|+.|++.|++|+||||..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999975
No 214
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.60 E-value=0.00051 Score=72.65 Aligned_cols=96 Identities=17% Similarity=0.125 Sum_probs=70.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHHH
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHY 138 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~~ 138 (661)
-+|+|||+|..|+.+|..+++.|.+|+++++...... . ..
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------~---------------~~------- 185 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------------G---------------LL------- 185 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------T---------------TS-------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------------c---------------cc-------
Confidence 5799999999999999999999999999998631100 0 00
Q ss_pred HHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEEE
Q psy15089 139 MTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFA 218 (661)
Q Consensus 139 ~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v 218 (661)
...+.+.+.+.+++.|++++.++.+
T Consensus 186 -------------------------------------------------------~~~~~~~l~~~l~~~gv~i~~~~~v 210 (384)
T 2v3a_A 186 -------------------------------------------------------HPAAAKAVQAGLEGLGVRFHLGPVL 210 (384)
T ss_dssp -------------------------------------------------------CHHHHHHHHHHHHTTTCEEEESCCE
T ss_pred -------------------------------------------------------CHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 0233445556667789999999999
Q ss_pred EEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 219 LDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 219 ~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
+++..+++.+ .+. ..+|+ .+.++.||+|+|-
T Consensus 211 ~~i~~~~~~~-~v~---~~~g~--~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 211 ASLKKAGEGL-EAH---LSDGE--VIPCDLVVSAVGL 241 (384)
T ss_dssp EEEEEETTEE-EEE---ETTSC--EEEESEEEECSCE
T ss_pred EEEEecCCEE-EEE---ECCCC--EEECCEEEECcCC
Confidence 9998776643 233 25665 4889999999993
No 215
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.59 E-value=3.7e-05 Score=83.88 Aligned_cols=39 Identities=23% Similarity=0.320 Sum_probs=34.1
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRS 95 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~ 95 (661)
..+||+|||||++||+||+.|+++|.+|+|+|+....+|
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 358999999999999999999999999999999865544
No 216
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.58 E-value=0.00029 Score=75.80 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEE--eCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLII--ENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~--~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+...+.+.+++.|++++.++.++++.. +++++.++.. .+|+ .+.++.||+|+|
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~---~~G~--~i~~D~Vv~a~G 247 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLC---EDGT--RLPADLVIAGIG 247 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEE---TTSC--EEECSEEEECCC
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEe---CCCC--EEEcCEEEECCC
Confidence 334455566678999999999999986 5577766654 5675 488999999999
No 217
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.57 E-value=0.00057 Score=70.48 Aligned_cols=53 Identities=6% Similarity=0.021 Sum_probs=40.4
Q ss_pred HHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 201 LYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 201 L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
|.+.+++.|++++.++.+.++.. ++++.++...+..+|+...+.++.||+|+|
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEG-DERVRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHhccccCCeEEecCCcceeEcc-CCCeeEEEEEECCCCceEEEecCEEEEeec
Confidence 33445667999999999999876 466667766543367666799999999999
No 218
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.56 E-value=0.00064 Score=74.35 Aligned_cols=57 Identities=7% Similarity=-0.093 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 198 LHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 198 ~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+.+.+.+++.||+++.++.+.++...++....+...+..+|+...+.+|.||+|+|
T Consensus 228 ~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 228 SSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp HHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEccc
Confidence 344455667789999999999999774433233555554457766789999999999
No 219
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.55 E-value=6.7e-05 Score=82.30 Aligned_cols=56 Identities=14% Similarity=0.192 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCC-cEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 195 HSLLHTLYGQSLRYD-CNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 195 ~~l~~~L~~~a~~~g-v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
..+.+.|.+.+.+.| ++|+.++.|++|..+++.+. |. ..+|+ .+.||.||+|+|-.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~-v~---~~~g~--~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAAR-VT---ARDGR--EFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEE-EE---ETTCC--EEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEE-EE---ECCCC--EEEcCEEEECCCHH
Confidence 578889999988888 99999999999988766442 22 25665 48999999999953
No 220
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.55 E-value=0.00042 Score=75.06 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||.+|+.+|..+++.|.+|+|+|+.
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~ 199 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYM 199 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecC
Confidence 47999999999999999999999999999986
No 221
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.54 E-value=2.4e-05 Score=84.29 Aligned_cols=31 Identities=29% Similarity=0.483 Sum_probs=28.4
Q ss_pred cEEEECCcHHHHHHHHHhHHCC--CcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEG--FKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G--~~V~liek~ 90 (661)
.|||||||+||++||.+|++.+ .+|+|||+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~ 36 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCC
Confidence 5999999999999999999865 789999986
No 222
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.53 E-value=0.00033 Score=75.82 Aligned_cols=32 Identities=28% Similarity=0.252 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-+|..+++.|.+|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 199 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMF 199 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeC
Confidence 47999999999999999999999999999976
No 223
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.53 E-value=0.00068 Score=74.05 Aligned_cols=57 Identities=11% Similarity=-0.003 Sum_probs=41.6
Q ss_pred HHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 198 LHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 198 ~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+.+.+.+++.||+++.++.+.++..+++....+...+..+|+...+.+|.||+|+|
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 230 AELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp HHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSC
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcc
Confidence 344555667789999999999999875432234555554456666799999999999
No 224
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.52 E-value=0.00066 Score=73.46 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
+.+.+.+.+++.|++++.++.|+++..+++++.++. .+|+ .+.++.||+|+|-
T Consensus 193 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~----~~g~--~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 193 FTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKT----LDGK--EIKSDIAILCIGF 245 (452)
T ss_dssp HHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEE----TTSC--EEEESEEEECCCE
T ss_pred HHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEE----eCCC--EEECCEEEECcCC
Confidence 344455666788999999999999987677765543 2554 4889999999993
No 225
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.51 E-value=5.5e-05 Score=83.19 Aligned_cols=40 Identities=28% Similarity=0.357 Sum_probs=35.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
..+||+|||||++||+||+.|+++|.+|+|+|+....+|.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 4589999999999999999999999999999998765543
No 226
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.51 E-value=7e-05 Score=78.01 Aligned_cols=34 Identities=32% Similarity=0.285 Sum_probs=32.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
+||+|||||+||+.||+.|++.|.+|+|+|+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 5999999999999999999999999999998753
No 227
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.51 E-value=0.00062 Score=75.18 Aligned_cols=99 Identities=17% Similarity=0.210 Sum_probs=73.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCCcccccCceEEccCCCCCCCHHHHHHHHHhccCCCCCHHHHHH
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHY 138 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~s~~a~Gg~~~~~~~~~~d~~~~~~~d~~~~g~~l~~~~~~~~ 138 (661)
-.|+|||||..|+-.|..+++.|.+|+++++...... . .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----------------~-----------------~~------ 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-----------------I-----------------KD------ 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-----------------C-----------------CS------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-----------------c-----------------cc------
Confidence 5799999999999999999999999999997631100 0 00
Q ss_pred HHHHHHHHHHHHHHCCCCcccCCCCcccccccCCcccccCCCCccceeeeccCCcHHHHHHHHHHHHHhCCcEEEEeEEE
Q psy15089 139 MTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFA 218 (661)
Q Consensus 139 ~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~gg~~~~~~~g~~~~r~~~~~~~~g~~l~~~L~~~a~~~gv~i~~~~~v 218 (661)
..+...|.+.+++.|++++.++.|
T Consensus 255 --------------------------------------------------------~~~~~~l~~~l~~~GV~i~~~~~V 278 (523)
T 1mo9_A 255 --------------------------------------------------------NETRAYVLDRMKEQGMEIISGSNV 278 (523)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHHHTTCEEESSCEE
T ss_pred --------------------------------------------------------HHHHHHHHHHHHhCCcEEEECCEE
Confidence 234445566677889999999999
Q ss_pred EEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 219 LDLIIE-NGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 219 ~~l~~~-~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
+++..+ ++++.|+.+. ..+|+ ..+.|+.||+|+|-
T Consensus 279 ~~i~~~~~~~v~~~~v~-~~~G~-~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 279 TRIEEDANGRVQAVVAM-TPNGE-MRIETDFVFLGLGE 314 (523)
T ss_dssp EEEEECTTSBEEEEEEE-ETTEE-EEEECSCEEECCCC
T ss_pred EEEEEcCCCceEEEEEE-ECCCc-EEEEcCEEEECcCC
Confidence 999875 4556554433 25664 35899999999993
No 228
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.47 E-value=6.1e-05 Score=82.12 Aligned_cols=38 Identities=21% Similarity=0.159 Sum_probs=34.1
Q ss_pred cccEEEECCcHHHHHHHHHhHHCC--CcEEEEEecCCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEG--FKTAVITKLFPTRS 95 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G--~~V~liek~~~~~~ 95 (661)
.+||+|||||++||+||+.|++.| .+|+|+|+....++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 479999999999999999999999 99999999765444
No 229
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.45 E-value=0.00015 Score=79.38 Aligned_cols=41 Identities=24% Similarity=0.186 Sum_probs=35.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCC-CcEEEEEecCCCCCCc
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEG-FKTAVITKLFPTRSHT 97 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G-~~V~liek~~~~~~~s 97 (661)
..+||+|||||++||+||+.|++.| .+|+|+||....+|..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCee
Confidence 3589999999999999999999998 7999999987655543
No 230
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.43 E-value=0.00049 Score=74.88 Aligned_cols=32 Identities=28% Similarity=0.227 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~ 209 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFA 209 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Confidence 47999999999999999999999999999986
No 231
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.42 E-value=6.8e-05 Score=79.32 Aligned_cols=34 Identities=29% Similarity=0.301 Sum_probs=31.7
Q ss_pred cEEEECCcHHHHHHHHHhHHC--CCcEEEEEecCCC
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLFPT 93 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~~~ 93 (661)
||+|||||+||+++|+.|++. |.+|+|+||....
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999999 9999999997543
No 232
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.41 E-value=0.00056 Score=74.65 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=30.7
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.-+|+|||||..|+-+|..+++.|.+|+++++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 218 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERN 218 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeC
Confidence 358999999999999999999999999999986
No 233
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.41 E-value=9.3e-05 Score=78.41 Aligned_cols=39 Identities=21% Similarity=0.246 Sum_probs=34.9
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
++||+|||||++|+++|..|++.|.+|+|+|+....+|.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCc
Confidence 479999999999999999999999999999997665544
No 234
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.40 E-value=0.0018 Score=70.05 Aligned_cols=46 Identities=11% Similarity=-0.024 Sum_probs=37.9
Q ss_pred CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 208 YDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.|++++.++.|+++..+++.+ .+...+..+|+...+.+|.||+|||
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG 374 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGI-ELALRDAGSGELSVETYDAVILATG 374 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEE-EEEEEETTTCCEEEEEESEEEECCC
T ss_pred CCeEEEeCCEEEEEEecCCEE-EEEEEEcCCCCeEEEECCEEEEeeC
Confidence 589999999999998877653 3555555588888899999999999
No 235
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.00066 Score=74.09 Aligned_cols=32 Identities=31% Similarity=0.291 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRG 217 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeC
Confidence 46999999999999999999999999999976
No 236
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.39 E-value=0.00093 Score=72.30 Aligned_cols=53 Identities=6% Similarity=0.033 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 196 SLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 196 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
.+.+.+.+.+++.|++++.++.++++..+++++ .+.. .+| .+.||.||+|+|-
T Consensus 190 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~v~~---~~g---~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAVIFHFEETVLGIEETANGI-VLET---SEQ---EISCDSGIFALNL 242 (452)
T ss_dssp HHHHHHHHHHHTTTEEEEETCCEEEEEECSSCE-EEEE---SSC---EEEESEEEECSCC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeE-EEEE---CCC---EEEeCEEEECcCC
Confidence 344555666778899999999999998777766 4432 444 4899999999993
No 237
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.39 E-value=0.00097 Score=73.00 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=30.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-.|+|||||..|+-.|..+++.|.+|+++++..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 479999999999999999999999999999863
No 238
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.39 E-value=0.00085 Score=74.05 Aligned_cols=47 Identities=11% Similarity=0.129 Sum_probs=40.6
Q ss_pred CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 208 YDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.||+++.++.++++..+++++.++...+..+|+...+.++.||+|+|
T Consensus 404 ~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp TTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 48999999999999877778888888775678777899999999999
No 239
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.37 E-value=0.0004 Score=75.32 Aligned_cols=32 Identities=28% Similarity=0.345 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||.+|+-+|..+++.|.+|+|+++.
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 203 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR 203 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999986
No 240
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.35 E-value=0.0013 Score=66.78 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=41.3
Q ss_pred HhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 206 LRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 206 ~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
++.||+++.++.+.++..+++++.++.+. ..+|+...+.+|.||+|+|
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G 241 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVG 241 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSC
T ss_pred hcCCeEEEeCcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEc
Confidence 46799999999999998888888888765 4578777899999999999
No 241
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.35 E-value=0.0013 Score=67.78 Aligned_cols=49 Identities=8% Similarity=0.082 Sum_probs=39.5
Q ss_pred HhCCcEEEEeEEEEEEEEeCC--EEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 206 LRYDCNYFVEYFALDLIIENG--ECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 206 ~~~gv~i~~~~~v~~l~~~~g--~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
++.||+++.++.++++..+++ ++.++.+.+..+|+...+.+|.||+|+|
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 256 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIG 256 (333)
T ss_dssp TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred hCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeC
Confidence 356899999999999987654 7777777654467667799999999999
No 242
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.34 E-value=0.0013 Score=70.12 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=30.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-+|..+++.|.+|+++++.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 177 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQ 177 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeC
Confidence 57999999999999999999999999999986
No 243
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.34 E-value=0.0013 Score=71.48 Aligned_cols=55 Identities=7% Similarity=0.082 Sum_probs=37.1
Q ss_pred HHHHHHHH-HhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 198 LHTLYGQS-LRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 198 ~~~L~~~a-~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+.+.+.+ ++.||+++.++.++++..+++.+ .+... ..+|+...+.++.||+|+|
T Consensus 218 ~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~-~~~g~~~~i~~D~vv~a~G 273 (468)
T 2qae_A 218 TNALVGALAKNEKMKFMTSTKVVGGTNNGDSV-SLEVE-GKNGKRETVTCEALLVSVG 273 (468)
T ss_dssp HHHHHHHHHHHTCCEEECSCEEEEEEECSSSE-EEEEE-CC---EEEEEESEEEECSC
T ss_pred HHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeE-EEEEE-cCCCceEEEECCEEEECCC
Confidence 34455566 77899999999999998765443 23322 1256545689999999999
No 244
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.32 E-value=0.00013 Score=79.96 Aligned_cols=40 Identities=33% Similarity=0.432 Sum_probs=35.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
..+||+|||||++||+||..|++.|.+|+|+|+....++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 3579999999999999999999999999999997655443
No 245
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.32 E-value=0.0014 Score=71.18 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 203 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFL 203 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcC
Confidence 47999999999999999999999999999986
No 246
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.31 E-value=0.00013 Score=78.98 Aligned_cols=36 Identities=36% Similarity=0.437 Sum_probs=33.0
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
..+||+|||||+||++||..|++.|++|+|+|+...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 457999999999999999999999999999999743
No 247
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.31 E-value=0.0015 Score=71.06 Aligned_cols=55 Identities=9% Similarity=0.050 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+.+.+.+.+++.||+++.++.++++..+++.+. +...+ .+| ...+.+|.||+|+|
T Consensus 223 ~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~-v~~~~-~~g-~~~~~~D~vi~a~G 277 (476)
T 3lad_A 223 VAKEAQKILTKQGLKILLGARVTGTEVKNKQVT-VKFVD-AEG-EKSQAFDKLIVAVG 277 (476)
T ss_dssp HHHHHHHHHHHTTEEEEETCEEEEEEECSSCEE-EEEES-SSE-EEEEEESEEEECSC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEE-EEEEe-CCC-cEEEECCEEEEeeC
Confidence 344455566778999999999999987766543 33322 233 45689999999999
No 248
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.31 E-value=0.00092 Score=73.14 Aligned_cols=32 Identities=28% Similarity=0.339 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~ 226 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVV 226 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcc
Confidence 46999999999999999999999999999986
No 249
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.30 E-value=0.0015 Score=71.23 Aligned_cols=32 Identities=34% Similarity=0.300 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRH 219 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeC
Confidence 47999999999999999999999999999975
No 250
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.30 E-value=0.001 Score=73.02 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 208 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARG 208 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecC
Confidence 36999999999999999999999999999976
No 251
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.29 E-value=0.00039 Score=74.25 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+.+.+.+.+++.||+++.++.+.++..++ ++.++.. .+|+ .+.||.||+|+|
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~v~~---~dg~--~i~aD~Vv~a~G 238 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEG-QLEQVMA---SDGR--SFVADSALICVG 238 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSS-SCCEEEE---TTSC--EEECSEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccC-cEEEEEE---CCCC--EEEcCEEEEeeC
Confidence 33445556677899999999999987643 4555553 5676 488999999999
No 252
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.28 E-value=0.0011 Score=72.19 Aligned_cols=53 Identities=25% Similarity=0.231 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 196 SLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 196 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+.+.+.+.+++.|++++.++.|+++..+++++. +.. .+|+ .+.+|.||+|+|
T Consensus 203 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~-v~~---~~g~--~i~aD~Vv~a~G 255 (472)
T 3iwa_A 203 SLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVA-RVI---TDKR--TLDADLVILAAG 255 (472)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEE-EEE---ESSC--EEECSEEEECSC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEE-EEE---eCCC--EEEcCEEEECCC
Confidence 3445556667788999999999999987677665 332 4565 489999999999
No 253
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.23 E-value=0.0022 Score=65.36 Aligned_cols=47 Identities=17% Similarity=0.325 Sum_probs=38.8
Q ss_pred hCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 207 RYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 207 ~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+.||+++.++.++++..+ +++.++...+..+|+...+.+|.||+|+|
T Consensus 202 ~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G 248 (323)
T 3f8d_A 202 KPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIG 248 (323)
T ss_dssp CTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCCcEEEeCCEEEEEecc-CceeEEEEEECCCCceEEEEcCEEEEEEC
Confidence 348999999999998765 66777877765678877799999999999
No 254
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.21 E-value=0.0035 Score=69.01 Aligned_cols=31 Identities=29% Similarity=0.331 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 5999999999999999999999999999864
No 255
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.20 E-value=0.0023 Score=71.31 Aligned_cols=31 Identities=35% Similarity=0.398 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||||..|+-+|..+++.|.+|+++++.
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 183 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELA 183 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcC
Confidence 7999999999999999999999999999986
No 256
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.0013 Score=71.37 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCc
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGG 255 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg 255 (661)
+.+.+.+.+++.|++++.++.|+++..+++.+..+.. ..+|+ +.+|.||+|+|-
T Consensus 213 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~--~~~g~---i~aD~Vv~a~G~ 266 (463)
T 4dna_A 213 MRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATT--MKHGE---IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEE--SSSCE---EEESEEEECSCE
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEE--cCCCe---EEeCEEEEeeCc
Confidence 4445566677889999999999999876544333331 35664 889999999993
No 257
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.16 E-value=0.0016 Score=71.00 Aligned_cols=52 Identities=19% Similarity=0.197 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 197 LLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 197 l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+...+.+.+++.|++++.++.|+++..+++.+ .+.. .+|+ .+.||.||+|+|
T Consensus 234 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v-~v~~---~~g~--~i~aD~Vi~A~G 285 (484)
T 3o0h_A 234 LRQLLNDAMVAKGISIIYEATVSQVQSTENCY-NVVL---TNGQ--TICADRVMLATG 285 (484)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEECSSSE-EEEE---TTSC--EEEESEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEE-EEEE---CCCc--EEEcCEEEEeeC
Confidence 33445556667899999999999998776654 3332 5665 488999999999
No 258
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.16 E-value=0.00027 Score=76.94 Aligned_cols=38 Identities=26% Similarity=0.297 Sum_probs=33.7
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFPTRS 95 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~~~~ 95 (661)
.+||+|||+|++|+++|+.|++.|. +|+|+|+....++
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 5799999999999999999999998 8999999765544
No 259
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.09 E-value=0.00039 Score=79.25 Aligned_cols=37 Identities=30% Similarity=0.360 Sum_probs=33.6
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
...+||+|||||+||+.||..|++.|++|+|+|+...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~ 407 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 407 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3458999999999999999999999999999999753
No 260
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.09 E-value=0.00036 Score=80.31 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=33.6
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
...+||+|||||+||++||+.|++.|++|+|+|+...
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3457999999999999999999999999999999754
No 261
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.08 E-value=0.0022 Score=65.65 Aligned_cols=49 Identities=10% Similarity=0.164 Sum_probs=39.7
Q ss_pred HHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 205 SLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 205 a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
+++.||+++.++.+.++..+++ +.++...+..+|+...+.+|.||+|+|
T Consensus 199 l~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G 247 (332)
T 3lzw_A 199 LHASKVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVNYG 247 (332)
T ss_dssp HHHSSCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEECCC
T ss_pred HhcCCeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEeec
Confidence 3467899999999999876655 667777776677777899999999999
No 262
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.04 E-value=0.0021 Score=70.10 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~ 217 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMM 217 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEEC
Confidence 47999999999999999999999999999976
No 263
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.03 E-value=0.0031 Score=69.08 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||+|..|+-.|..+++.|.+|+++++.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 214 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQ 214 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcC
Confidence 47999999999999999999999999999976
No 264
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.01 E-value=0.002 Score=67.67 Aligned_cols=32 Identities=28% Similarity=0.460 Sum_probs=30.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-+|..+++.|.+|+++++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 175 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRG 175 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999976
No 265
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.92 E-value=0.00059 Score=77.62 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=35.3
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRS 95 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~ 95 (661)
...+||+|||+|++|++||+.|++.|.+|+|+|+....+|
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3458999999999999999999999999999999765444
No 266
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.91 E-value=0.0047 Score=67.50 Aligned_cols=51 Identities=14% Similarity=0.170 Sum_probs=38.4
Q ss_pred HHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 198 LHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 198 ~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
...+.+.+++.||+++.++.|+++..+++.+ .+.. .+|+ .+.|+.||+|+|
T Consensus 229 ~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~-~v~l---~dG~--~i~aD~Vv~a~G 279 (493)
T 1m6i_A 229 SNWTMEKVRREGVKVMPNAIVQSVGVSSGKL-LIKL---KDGR--KVETDHIVAAVG 279 (493)
T ss_dssp HHHHHHHHHTTTCEEECSCCEEEEEEETTEE-EEEE---TTSC--EEEESEEEECCC
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEecCCeE-EEEE---CCCC--EEECCEEEECCC
Confidence 3445556677899999999999998776654 3332 5675 489999999999
No 267
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.91 E-value=0.0032 Score=70.45 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 219 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMA 219 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 47999999999999999999999999999875
No 268
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.90 E-value=0.0025 Score=65.66 Aligned_cols=48 Identities=8% Similarity=0.095 Sum_probs=36.3
Q ss_pred HhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 206 LRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 206 ~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
++.||+++.++.++++..++ ++.++.+.+..+|+...+.+|.||+|+|
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFVAIG 249 (335)
T ss_dssp HCTTEEEECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEECSC
T ss_pred ccCCcEEEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEEccC
Confidence 35789999999999987554 4556666544466556789999999999
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.86 E-value=0.0041 Score=63.24 Aligned_cols=47 Identities=13% Similarity=0.027 Sum_probs=36.8
Q ss_pred CCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 208 YDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 208 ~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+++.+..+.+.++...++...|+...+..+++...+.++.||+|+|
T Consensus 201 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G 247 (314)
T 4a5l_A 201 PKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIG 247 (314)
T ss_dssp TTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred cceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecc
Confidence 35566666777777776777778887776777778899999999999
No 270
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.86 E-value=0.00058 Score=73.97 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=31.6
Q ss_pred cccEEEECCcHHHHHHHHHhHH-C------CCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVA-E------GFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~-~------G~~V~liek~~ 91 (661)
.+||+|||||+||+.||..|++ . |.+|+|||+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 4799999999999999999999 7 99999999974
No 271
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.85 E-value=0.00078 Score=80.45 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=41.3
Q ss_pred HHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEc---CC-------CcEEEEEcCeEEEcCCcc
Q psy15089 203 GQSLRYDCNYFVEYFALDLIIENGECKGVIALCL---ED-------GSIHRFNANNTVLATGGY 256 (661)
Q Consensus 203 ~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~---~~-------G~~~~i~Ak~VIlAtGg~ 256 (661)
+.+++.||+++.++.++++..+++++.++.+.+. .+ |+...+.||.||+|+|-.
T Consensus 378 ~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 378 ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 4566789999999999999887889888876421 12 334578999999999963
No 272
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.84 E-value=0.0008 Score=78.14 Aligned_cols=39 Identities=21% Similarity=0.283 Sum_probs=34.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRS 95 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~ 95 (661)
...||+|||+|++||+||+.|++.|++|+|+|+....+|
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 457999999999999999999999999999999765544
No 273
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.83 E-value=0.00066 Score=74.38 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=31.9
Q ss_pred cccccEEEECCcHHHHHHHHHhHHC--CCcEEEEEecC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAE--GFKTAVITKLF 91 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~~ 91 (661)
+..+||||||||+||++||..|++. |.+|+|||+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 3468999999999999999888876 88999999974
No 274
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.72 E-value=0.011 Score=65.09 Aligned_cols=53 Identities=9% Similarity=-0.060 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 196 SLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 196 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
.+...+.+.+++.|++++.++.+..+...++.+. +. ..+++. +.++.|++|+|
T Consensus 264 ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~-v~---~~~~~~--~~~D~vLvAvG 316 (542)
T 4b1b_A 264 QCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKIL-VE---FSDKTS--ELYDTVLYAIG 316 (542)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEE-EE---ETTSCE--EEESEEEECSC
T ss_pred hHHHHHHHHHHhhcceeecceEEEEEEecCCeEE-EE---EcCCCe--EEEEEEEEccc
Confidence 3444555667788999999999999988877653 22 245543 67899999999
No 275
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.67 E-value=0.0064 Score=65.52 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 180 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRG 180 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcC
Confidence 8999999999999999999999999999986
No 276
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.62 E-value=0.0011 Score=71.74 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=31.7
Q ss_pred cccEEEECCcHHHHHHHHHhHHCC--CcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEG--FKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G--~~V~liek~~ 91 (661)
.+||+|||||+||+.||..|++.| .+|+|+|+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~ 41 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 41 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 479999999999999999999998 9999999974
No 277
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.58 E-value=0.0072 Score=64.96 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.|+|||||..|+-.|..+++.|.+|+|+++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 79999999999999999999999999999863
No 278
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.51 E-value=0.011 Score=64.10 Aligned_cols=32 Identities=38% Similarity=0.453 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||||..|+-.|..+++.|.+|+++++.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 204 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEML 204 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeC
Confidence 46999999999999999999999999999976
No 279
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.40 E-value=0.0025 Score=71.20 Aligned_cols=55 Identities=15% Similarity=0.248 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEEcCC
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIEN--GECKGVIALCLEDGSIHRFNANNTVLATG 254 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtG 254 (661)
..|.+.|.+.++..|++++.++.|.+|+.++ |+++||.. .+|+. |+|+.||.+..
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~---~~Ge~--i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVID---QFGQR--IISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEE---TTSCE--EECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEe---CCCCE--EEcCEEEEChh
Confidence 4788889899999999999999999999987 88998772 56764 78999887443
No 280
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.38 E-value=0.0044 Score=73.40 Aligned_cols=52 Identities=21% Similarity=0.280 Sum_probs=38.9
Q ss_pred HHhCCcEEEEeEEEEEEEEe-CCEEEEEEEEEcC----CCcEEEEEcCeEEEcCCcc
Q psy15089 205 SLRYDCNYFVEYFALDLIIE-NGECKGVIALCLE----DGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 205 a~~~gv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~----~G~~~~i~Ak~VIlAtGg~ 256 (661)
+++.||+++.++.++++..+ ++++.++.+.+.. +|+...+.+|.||+|+|-.
T Consensus 326 l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~ 382 (965)
T 2gag_A 326 AVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFN 382 (965)
T ss_dssp HHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEE
T ss_pred HHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcC
Confidence 34678999999999998775 6777777765411 2545679999999999953
No 281
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.25 E-value=0.017 Score=63.11 Aligned_cols=55 Identities=15% Similarity=0.056 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcE--EEEEcCeEEEcCC
Q psy15089 196 SLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSI--HRFNANNTVLATG 254 (661)
Q Consensus 196 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~--~~i~Ak~VIlAtG 254 (661)
.+.+.+.+.+++.||+++.++.|+++. ++.+.-. ....+|+. ..|.|+.||.|+|
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~--~~~~dg~~~~~~i~ad~viwa~G 329 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAK--TKHEDGKITEETIPYGTLIWATG 329 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEE--EECTTSCEEEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEe--CCceEEE--EEecCcccceeeeccCEEEEccC
Confidence 344455566778899999999999873 3333211 11245543 4699999999999
No 282
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.23 E-value=0.0021 Score=67.88 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-.|+|||||..|+-+|..|++.|.+|+|+++.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~ 179 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILE 179 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 479999999999999999999999999999863
No 283
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.11 E-value=0.019 Score=59.67 Aligned_cols=31 Identities=32% Similarity=0.503 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~ 198 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTST 198 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecC
Confidence 7999999999999999999999999999976
No 284
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.92 E-value=0.069 Score=54.02 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||||..|+-+|..+++.|.+|+|+++.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecc
Confidence 6999999999999999999999999999976
No 285
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.89 E-value=0.0028 Score=71.70 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=31.8
Q ss_pred cccEEEECCcHHHHHHHHHhHHCC--------CcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEG--------FKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G--------~~V~liek~~ 91 (661)
..+|+|||||++||+||+.|++.| .+|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 468999999999999999999998 9999999976
No 286
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.89 E-value=0.0045 Score=67.84 Aligned_cols=33 Identities=9% Similarity=0.262 Sum_probs=30.9
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
+..|||||||.||+++|.+|++.+++|+|||+.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCC
Confidence 457999999999999999999999999999986
No 287
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.06 E-value=0.049 Score=54.40 Aligned_cols=31 Identities=23% Similarity=0.123 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||+|..|+-.|..+++.| +|+++++.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~ 172 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNG 172 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTT
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECC
Confidence 47999999999999999999999 99999764
No 288
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.04 E-value=0.057 Score=58.22 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=40.9
Q ss_pred HHHHHHHHHHh------CCcEEEEeEEEEEEEEeCCEEEEEEEEEc-------------CCCcEEEEEcCeEEEcCC
Q psy15089 197 LLHTLYGQSLR------YDCNYFVEYFALDLIIENGECKGVIALCL-------------EDGSIHRFNANNTVLATG 254 (661)
Q Consensus 197 l~~~L~~~a~~------~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~-------------~~G~~~~i~Ak~VIlAtG 254 (661)
+.+.|.+.+++ .|+++++++.++++..+ +++.++.+.+. .+|+...+.++.||+|+|
T Consensus 248 ~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G 323 (456)
T 1lqt_A 248 NIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVG 323 (456)
T ss_dssp HHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSC
T ss_pred HHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccc
Confidence 34555565655 68999999999998754 55666655321 246666799999999999
No 289
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=94.69 E-value=0.041 Score=63.11 Aligned_cols=32 Identities=13% Similarity=0.122 Sum_probs=29.8
Q ss_pred ccEEEEC--CcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVG--AGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVG--gG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+||| ||..|+-+|..|++.|.+|+|+++.
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~ 562 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGV 562 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecc
Confidence 3799999 9999999999999999999999976
No 290
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.56 E-value=0.11 Score=57.20 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-.|+|||+|..|+-.|..+++.+.+|+|+++.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 479999999999999999999999999999874
No 291
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=94.48 E-value=0.092 Score=59.56 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=35.7
Q ss_pred HHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 201 LYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 201 L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
+.+.+++.||+++.++.++++. ++. +.+. .+|+...+.+|.||+|+|-.
T Consensus 579 ~~~~l~~~GV~v~~~~~v~~i~--~~~---v~~~--~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 579 HRTTLLSRGVKMIPGVSYQKID--DDG---LHVV--INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHTTCEEECSCEEEEEE--TTE---EEEE--ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHhcCCEEEeCcEEEEEe--CCe---EEEe--cCCeEEEEeCCEEEECCCcc
Confidence 3455667899999999998875 332 3322 46766679999999999943
No 292
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.34 E-value=0.39 Score=52.79 Aligned_cols=33 Identities=21% Similarity=0.217 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-.|+|||+|..|+-.|..+++.|.+|+++++.+
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 479999999999999999999999999999874
No 293
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=92.66 E-value=0.082 Score=53.34 Aligned_cols=48 Identities=23% Similarity=0.282 Sum_probs=37.4
Q ss_pred cCcccCCCCeEEeecCCCCccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhc
Q psy15089 408 GGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEEN 472 (661)
Q Consensus 408 GGi~vd~~~~vl~~d~~~~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~ 472 (661)
|.|.||+++| |++||+||||||+..+. ..+..|+-.|++||.+|.+++
T Consensus 252 G~I~vd~~~~---------Ts~p~IyA~GDv~~~~~--------~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 252 GTFVIDDFGR---------TSEKNIYLAGETTTQGP--------SSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp SSSCSSTTCB---------CSSTTEEECSHHHHTSC--------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECcCCc---------cCCCCEEEEeccCCCcc--------hHHHHHHHHHHHHHHHHHHHH
Confidence 5688888776 99999999999874222 124567789999999998876
No 294
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=92.14 E-value=0.19 Score=53.60 Aligned_cols=54 Identities=17% Similarity=0.146 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 196 SLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 196 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
.+...+.+.+++.|++++. ..|+.+..++..|. ..+|+ .+.+|.||+|||....
T Consensus 60 ~~~~~l~~~~~~~gv~~~~-~~v~~id~~~~~V~------~~~g~--~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 60 DIAFPIRHYVERKGIHFIA-QSAEQIDAEAQNIT------LADGN--TVHYDYLMIATGPKLA 113 (437)
T ss_dssp HHEEECHHHHHTTTCEEEC-SCEEEEETTTTEEE------ETTSC--EEECSEEEECCCCEEC
T ss_pred HHHHHHHHHHHHCCCEEEE-eEEEEEEcCCCEEE------ECCCC--EEECCEEEECCCCCcC
Confidence 4444455667778999874 57888866555432 25665 4889999999998543
No 295
>2lfc_A Fumarate reductase, flavoprotein subunit; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Lactobacillus plantarum}
Probab=91.86 E-value=0.056 Score=49.17 Aligned_cols=29 Identities=24% Similarity=0.410 Sum_probs=23.9
Q ss_pred CCceec-ccccCC--CcEEEcCCCCccccccc
Q psy15089 300 AGCLIT-EGCRGE--GGYLINSEGERFMERYA 328 (661)
Q Consensus 300 ~g~l~~-e~~~~~--g~~lvn~~G~rf~~~~~ 328 (661)
.+.+++ +.+++. |+++||.+|+||++|..
T Consensus 6 ~~~l~~~e~~rg~~~G~i~VN~~G~RFvnE~~ 37 (160)
T 2lfc_A 6 VAKLTTYASKQATDMGAIYVNSKGDRIVNESN 37 (160)
T ss_dssp CCSCCHHHHHHHHHHTCEEECSSSCEEESSCS
T ss_pred cceeeechhhccccCCEEEECCCCcCccCCCC
Confidence 455666 888888 99999999999999643
No 296
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.33 E-value=0.19 Score=45.16 Aligned_cols=33 Identities=24% Similarity=0.166 Sum_probs=30.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-.|+|||+|..|...|..|.+.|.+|+++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999753
No 297
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.08 E-value=0.28 Score=52.60 Aligned_cols=42 Identities=24% Similarity=0.233 Sum_probs=37.5
Q ss_pred ccccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 55 VDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 55 ~~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
++.++||+|||+|++||+||+.|+++|.+|+|+||....||.
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCcc
Confidence 445699999999999999999999999999999998766654
No 298
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.03 E-value=0.27 Score=43.26 Aligned_cols=32 Identities=28% Similarity=0.277 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||.|..|...|..|.+.|.+|+++|+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 47999999999999999999999999999986
No 299
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=91.01 E-value=0.16 Score=49.00 Aligned_cols=33 Identities=30% Similarity=0.596 Sum_probs=31.9
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
++||+|||||++|+.||+.|++.|.+|+|||+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 589999999999999999999999999999997
No 300
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=90.81 E-value=0.29 Score=51.57 Aligned_cols=52 Identities=10% Similarity=-0.011 Sum_probs=35.9
Q ss_pred HHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 201 LYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 201 L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
+.+.+.+.|++++.+ .|+.+..++..| .+.+ .+++...+.++.||+|||...
T Consensus 62 ~~~~~~~~gv~~~~~-~v~~i~~~~~~V---~~~~-g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 62 LSEALPEKGIQFQEG-TVEKIDAKSSMV---YYTK-PDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp HHHHTGGGTCEEEEC-EEEEEETTTTEE---EEEC-TTSCEEEEECSEEEECCCCEE
T ss_pred HHHHHhhCCeEEEEe-eEEEEeCCCCEE---EEcc-CCcccceeeCCEEEECCCCCc
Confidence 445556779998877 888887665543 2322 344456789999999999743
No 301
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.60 E-value=0.26 Score=43.23 Aligned_cols=31 Identities=29% Similarity=0.412 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|+|+|..|...|..|.+.|.+|+++|+.
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 6999999999999999999999999999975
No 302
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.48 E-value=0.28 Score=52.12 Aligned_cols=49 Identities=8% Similarity=0.123 Sum_probs=31.4
Q ss_pred ccccceeeeccccccCCCCCCcc---chhhhhhHHHHHHHHHHHHHHhcCCC
Q psy15089 427 KIIHGLYAAGEASCSSVHGANRL---GANSLLDLVVFGRACAKTIAEENKPG 475 (661)
Q Consensus 427 T~ipGLyAaGe~a~~g~hGanrl---gg~~l~~a~v~G~~Ag~~aa~~~~~~ 475 (661)
+++||+||+|||+...-.....+ .......|...|++||+++...+...
T Consensus 284 ~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 38999999999873211000000 01233467788999999999988643
No 303
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.64 E-value=0.33 Score=42.21 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|||+|..|...|..|.+.|.+|+++++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 36999999999999999999999999999974
No 304
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.15 E-value=0.33 Score=40.72 Aligned_cols=32 Identities=28% Similarity=0.337 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHCC-CcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEG-FKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G-~~V~liek~ 90 (661)
..|+|+|+|..|...+..|.+.| .+|+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 36999999999999999999999 899999875
No 305
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=88.86 E-value=0.3 Score=46.86 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.--|||||||..|...|..|.+.|++|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 357999999999999999999999999999853
No 306
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=88.63 E-value=0.27 Score=48.71 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|||||||..|...|..|.+.|++|+|++..
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46999999999999999999999999999975
No 307
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.30 E-value=0.52 Score=42.01 Aligned_cols=32 Identities=22% Similarity=0.273 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|..|...|..|.+.|.+|+++++.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 36999999999999999999999999999985
No 308
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=88.26 E-value=0.46 Score=50.52 Aligned_cols=43 Identities=16% Similarity=0.216 Sum_probs=31.4
Q ss_pred HHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 205 SLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 205 a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
+++.|++++.+ .|+.|..++.+|. +.+|+. +..|.+|||||.-
T Consensus 66 ~~~~gv~~i~~-~v~~Id~~~~~V~------~~~g~~--i~YD~LViAtG~~ 108 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDPDANTVT------TQSGKK--IEYDYLVIATGPK 108 (430)
T ss_dssp GGGGTEEEECS-CEEEEETTTTEEE------ETTCCE--EECSEEEECCCCE
T ss_pred HHHCCcEEEEe-EEEEEECCCCEEE------ECCCCE--EECCEEEEeCCCC
Confidence 34568997665 6888877666543 267764 7899999999963
No 309
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.23 E-value=0.41 Score=41.70 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|+|+|..|...|..|.+.|.+|+++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999974
No 310
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.42 E-value=0.38 Score=46.36 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=31.5
Q ss_pred ccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhcCC
Q psy15089 427 KIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENKP 474 (661)
Q Consensus 427 T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~~ 474 (661)
++.+|||+|||++ . |.++..|+..|+.||+.++++++.
T Consensus 292 ~~~~~v~l~GDa~-~---------g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 292 DADLGIYVCGDWC-L---------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp ETTTTEEECCGGG-T---------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred eCCCCEEEEeccc-C---------CcCHHHHHHHHHHHHHHHHHHhhc
Confidence 6789999999964 2 234677999999999999999865
No 311
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.83 E-value=0.52 Score=43.40 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHC-CCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE-GFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~-G~~V~liek~ 90 (661)
-.|+|||.|..|...|..|.+. |.+|+++|+.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 4699999999999999999999 9999999975
No 312
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=86.14 E-value=0.45 Score=50.79 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
.|+|||.|.+|+++|..|++.|++|++.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 589999999999999999999999999998653
No 313
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=86.09 E-value=0.56 Score=49.13 Aligned_cols=33 Identities=27% Similarity=0.204 Sum_probs=30.5
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
...|+|||+|.+|+.+|..|...|++|+++|+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 468999999999999999999999999999875
No 314
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.26 E-value=0.7 Score=47.90 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|.+|..++..|+..|++|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999875
No 315
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=84.42 E-value=0.84 Score=43.35 Aligned_cols=31 Identities=13% Similarity=0.310 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||+|..|...|..|.+.|.+|+++|+.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4899999999999999999999999999975
No 316
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=84.17 E-value=1.6 Score=48.56 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=36.8
Q ss_pred cccccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 56 DHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 56 ~~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
..+|||||||+|..|...|..|++.|.+|++|||....+|+
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 34799999999999999999999999999999998766554
No 317
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.97 E-value=0.65 Score=48.18 Aligned_cols=33 Identities=33% Similarity=0.265 Sum_probs=30.4
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
...|+|||+|.+|+.+|..|...|++|+++++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999875
No 318
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.52 E-value=0.68 Score=49.60 Aligned_cols=32 Identities=25% Similarity=0.125 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||.|.+|+++|..|.+.|++|.+.|+.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36999999999999999999999999999975
No 319
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=83.12 E-value=0.85 Score=47.97 Aligned_cols=32 Identities=28% Similarity=0.246 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|||+|.+|+.+|..|...|++|+++++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 57999999999999999999999999999865
No 320
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=83.02 E-value=1 Score=46.51 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-|+|+|||.-|..+|+.|.+.|++|++++..+
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 38999999999999999999999999999754
No 321
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.00 E-value=0.79 Score=44.74 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFP 92 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~ 92 (661)
...|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4679999999999999999999997 7889998643
No 322
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=82.85 E-value=1.2 Score=46.37 Aligned_cols=40 Identities=28% Similarity=0.274 Sum_probs=32.4
Q ss_pred CccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhcCCC
Q psy15089 426 DKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENKPG 475 (661)
Q Consensus 426 ~T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~~~ 475 (661)
...+||||+||+.+ |+.| ..+|...|.+||.+|+..++..
T Consensus 325 ~k~~~~Lf~AGqi~--G~~G--------y~eAaa~Gl~AG~naa~~~~g~ 364 (443)
T 3g5s_A 325 FREAEGLYAAGVLA--GVEG--------YLESAATGFLAGLNAARKALGL 364 (443)
T ss_dssp ETTEEEEEECGGGG--TBCS--------HHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCEEECcccc--ccHH--------HHHHHHhHHHHHHHHHHHhcCC
Confidence 35699999999975 4444 4489999999999999988654
No 323
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=82.82 E-value=0.99 Score=45.76 Aligned_cols=32 Identities=25% Similarity=0.341 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|.|||+|.-|..-|..++.+|++|+|+|..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 36999999999999999999999999999964
No 324
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=82.74 E-value=0.85 Score=48.98 Aligned_cols=32 Identities=13% Similarity=-0.003 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||+|..|+-.|..+++.|.+|+++++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~ 229 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYR 229 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEEC
Confidence 46999999999999999999999999999975
No 325
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.29 E-value=1 Score=47.14 Aligned_cols=33 Identities=24% Similarity=0.169 Sum_probs=29.8
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
...|+|+|+|.+|+.+|..|...|++|+++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999998865
No 326
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.81 E-value=1.1 Score=44.34 Aligned_cols=32 Identities=19% Similarity=0.384 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|+|+|.+|..+|..|++.|.+|+++.+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999988764
No 327
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=81.78 E-value=0.89 Score=48.49 Aligned_cols=32 Identities=13% Similarity=-0.078 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCc-EEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFK-TAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~-V~liek~ 90 (661)
-.|+|||+|..|+-.|..+++.|.+ |+++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~ 245 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 245 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCC
Confidence 4799999999999999999999999 9999875
No 328
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.74 E-value=1.2 Score=46.30 Aligned_cols=32 Identities=22% Similarity=0.299 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|..|..+|..|+..|++|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999864
No 329
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=81.51 E-value=1 Score=46.66 Aligned_cols=34 Identities=38% Similarity=0.558 Sum_probs=31.2
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.+..|||+|+|.||+.+|-.+...|. +|+++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 35789999999999999999999999 89999986
No 330
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=80.81 E-value=1 Score=48.82 Aligned_cols=62 Identities=18% Similarity=0.208 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcccc
Q psy15089 193 TGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGR 258 (661)
Q Consensus 193 ~g~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~~ 258 (661)
.+..+...+.+++ +.+++++.++.++++..++..+.-. ...+++...+.++.+|+|||+...
T Consensus 159 ~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~---~~~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 159 DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVP---VVRGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEE---EEETTEEEEEEESCEEECCCEEEC
T ss_pred CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEE---EecCCeEEEEECCEEEECCCCCcc
Confidence 3456666666555 6689999999999988766544311 113566567899999999998654
No 331
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.58 E-value=1.3 Score=44.41 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|.-|...|..++++|++|+++++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999999999875
No 332
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=80.31 E-value=1.4 Score=45.92 Aligned_cols=32 Identities=38% Similarity=0.361 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|||+|..|..+|..|+..|++|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999864
No 333
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=80.10 E-value=0.81 Score=40.28 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||+|..|...|..|.+.|.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46999999999999999999999998888864
No 334
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=79.97 E-value=1.4 Score=43.52 Aligned_cols=33 Identities=27% Similarity=0.504 Sum_probs=29.7
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
...++|||+|.+|.++|..|++.|.+|.|+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999889998775
No 335
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=79.60 E-value=1.4 Score=44.58 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|.-|...|..|++.|.+|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 36899999999999999999999999999875
No 336
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=79.45 E-value=1.6 Score=44.06 Aligned_cols=32 Identities=19% Similarity=0.381 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.++|+|+|.+|.++|..|++.|+ +|+|+.+.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999998 78888875
No 337
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=79.32 E-value=2.5 Score=45.53 Aligned_cols=39 Identities=31% Similarity=0.483 Sum_probs=35.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
++||+|||||++||+||..|+++|.+|+|+|+....+|.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 389999999999999999999999999999998655543
No 338
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=79.31 E-value=1.5 Score=43.65 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|.-|...|..+++.|++|+++++.
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5899999999999999999999999999865
No 339
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=79.14 E-value=1.4 Score=47.12 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|||||||..|...|..|.+.|++|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 35899999999999999999999999999964
No 340
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=79.09 E-value=1 Score=48.64 Aligned_cols=38 Identities=26% Similarity=0.306 Sum_probs=30.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCCCCCC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSH 96 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~~~~~ 96 (661)
.+|||||||++||+||+.|+++|++|+|+|+....||.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~ 39 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGR 39 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCc
Confidence 37999999999999999999999999999998765553
No 341
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=78.40 E-value=1.6 Score=44.46 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=28.4
Q ss_pred cEEEECCcHHHHH-HHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLR-AAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~-AA~~aa~~G~~V~liek~ 90 (661)
.|.|||.|.+|++ +|..|.++|++|.+.|+.
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5899999999996 788899999999999976
No 342
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=78.29 E-value=1.3 Score=48.59 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-.|+|||+|..|+-+|..+++.|.+|+++++.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 479999999999999999999999999999874
No 343
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=77.97 E-value=1.4 Score=43.51 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|.+|..+|..|++.|.+|+|+.+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 46999999999999999999999999999875
No 344
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=77.85 E-value=1.6 Score=45.22 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=30.9
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.+..|+|+|+|.||..+|-.|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 69999985
No 345
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=77.83 E-value=2.2 Score=43.46 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=31.4
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFPT 93 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~~ 93 (661)
...-|+|||+|..|..+|..|+..|. +++|+|.....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 35689999999999999999999997 57888876543
No 346
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=77.27 E-value=1.9 Score=42.98 Aligned_cols=32 Identities=41% Similarity=0.502 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|+|+|+|.+|.++|..|++.|. +|+|+.+.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 469999999999999999999998 58888764
No 347
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=77.06 E-value=1.9 Score=43.96 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|.-|...|..|++.|.+|.++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 36899999999999999999999999999864
No 348
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=76.92 E-value=1.6 Score=44.12 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|.-|...|..|++.|.+|+++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 36899999999999999999999999999875
No 349
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=76.61 E-value=2.2 Score=43.01 Aligned_cols=32 Identities=25% Similarity=0.376 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..++|+|+|.+|.++|..|++.|. +|+|+.+.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 469999999999999999999998 68888775
No 350
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=76.55 E-value=1.8 Score=43.41 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|+|||+|.+|..+|..|++.|. +|+|+.+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 369999999999999999999998 78888764
No 351
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=76.26 E-value=1.9 Score=46.16 Aligned_cols=32 Identities=31% Similarity=0.250 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|+|+|+|..|..+|..|+..|++|++.+..
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45899999999999999999999999998764
No 352
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=76.20 E-value=2.5 Score=41.24 Aligned_cols=31 Identities=35% Similarity=0.558 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.++|||+|.+|.+++..|.+.|. +|.|+++.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 79999999999999999999998 89999875
No 353
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=75.64 E-value=1.8 Score=42.86 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=29.5
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
...++|+|+|.+|.++|..|++.|. +|.|+.+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3479999999999999999999998 89988875
No 354
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=75.53 E-value=2.2 Score=43.52 Aligned_cols=32 Identities=9% Similarity=0.162 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|.|||+|..|...|..+++.|+ +|+|+|..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 469999999999999999999998 99999865
No 355
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=75.44 E-value=2.5 Score=44.49 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=30.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|||||.|..|...|..|.+.|.+|++||+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 36999999999999999999999999999975
No 356
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=75.36 E-value=1.8 Score=43.15 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|||+|.-|...|..|++.|.+|+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 36899999999999999999999999999986
No 357
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=75.10 E-value=2.3 Score=41.96 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.|.|||+|..|...|..+++.|.+|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 38999999999999999999999999998753
No 358
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=74.85 E-value=2.3 Score=42.95 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC--cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF--KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~ 90 (661)
..|.|||+|..|...|..+++.|. +|+++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 369999999999999999999998 89999864
No 359
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=74.76 E-value=2.3 Score=42.45 Aligned_cols=37 Identities=27% Similarity=0.293 Sum_probs=31.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFPT 93 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~~ 93 (661)
....|+|||+|..|..+|..|++.|. +++|+|.....
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve 72 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVE 72 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccC
Confidence 45789999999999999999999996 68888876443
No 360
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=74.71 E-value=2 Score=42.62 Aligned_cols=33 Identities=27% Similarity=0.184 Sum_probs=29.2
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
...++|+|+|.+|.++|..|.+.|. +|+|+.+.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3479999999999999999999998 78888865
No 361
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=74.70 E-value=2.4 Score=41.91 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=28.8
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
...++|+|+|.+|.++|..|++.|. +|+|+.+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3469999999999999999999996 78888764
No 362
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=74.59 E-value=2.6 Score=41.87 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=28.9
Q ss_pred ccEEEEC-CcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVG-AGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVG-gG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.++|+| +|.+|...|..|++.|++|+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 3589999 8999999999999999999888864
No 363
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=74.00 E-value=2.6 Score=42.67 Aligned_cols=31 Identities=26% Similarity=0.408 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|.-|..-|..++++|++|++++..
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5899999999999999999999999999875
No 364
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=73.82 E-value=2.7 Score=41.68 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..++|+|+|.+|...|..|++.|. +|.|+.+.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 469999999999999999999996 88888875
No 365
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=73.73 E-value=2.7 Score=39.56 Aligned_cols=32 Identities=13% Similarity=0.276 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|..|.+.|..+++.|.+|.++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46999999999999999999999999999875
No 366
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=73.39 E-value=2.5 Score=42.23 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|..|...|..+++.|.+|+++++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 5999999999999999999999999999864
No 367
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=73.37 E-value=2.5 Score=45.54 Aligned_cols=32 Identities=19% Similarity=0.334 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||.|.-|+..|..+++.|.+|+++++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 57899999999999999999999999999874
No 368
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=72.74 E-value=2.2 Score=42.53 Aligned_cols=31 Identities=29% Similarity=0.484 Sum_probs=27.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--++|+|+|.+|.+.|..|++.| +|+++.+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 35999999999999999999999 99988764
No 369
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=72.49 E-value=3.2 Score=41.40 Aligned_cols=32 Identities=28% Similarity=0.335 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||.|..|..+|..|...|.+|+++++.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999875
No 370
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=72.39 E-value=3.2 Score=41.54 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|||.|..|..+|..|...|.+|+++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 46999999999999999999999999999875
No 371
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=72.17 E-value=2.8 Score=42.94 Aligned_cols=32 Identities=22% Similarity=0.104 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|..|...|..|++.|.+|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999874
No 372
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=71.90 E-value=3 Score=44.19 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.3
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
...+.|||.|..||..|..+++.|.+|+.+|..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 367999999999999999999999999999864
No 373
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=71.85 E-value=3.6 Score=43.48 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=28.6
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC---cEEEEE
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF---KTAVIT 88 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~---~V~lie 88 (661)
...|||+|+|.||..+|..|.+.|. +|.|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 3579999999999999999999998 799999
No 374
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=71.59 E-value=3.1 Score=41.82 Aligned_cols=31 Identities=35% Similarity=0.468 Sum_probs=28.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC--cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF--KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~ 90 (661)
.|.|||+|..|...|..++..|. .|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 48999999999999999999998 89999864
No 375
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=71.54 E-value=2.4 Score=42.93 Aligned_cols=31 Identities=19% Similarity=0.351 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|||+|..|+-.|..+++.| +|+++.+.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 47999999999999999999998 79999875
No 376
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=71.49 E-value=3.2 Score=41.88 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=28.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|.-|...|..|++.|.+|.++ ..
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 46999999999999999999999999998 53
No 377
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=71.22 E-value=2.5 Score=41.20 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=30.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~ 91 (661)
...|+|||.|..|..+|..|++.|. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999997 578888764
No 378
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=70.87 E-value=2.2 Score=45.72 Aligned_cols=31 Identities=29% Similarity=0.397 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|+|+|--|...|-.|.+.|.+|+|||+.
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5999999999999999999999999999985
No 379
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.72 E-value=3.1 Score=44.36 Aligned_cols=31 Identities=32% Similarity=0.336 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||.|..|+..|..+++.|.+|+++++.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 5899999999999999999999999999875
No 380
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=70.64 E-value=3.4 Score=42.92 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=30.4
Q ss_pred cccEEEECC-cHHHHHHHHHhHHCCC---cEEEEEec
Q psy15089 58 QFDAVVVGA-GGAGLRAAFGLVAEGF---KTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGg-G~AGl~AA~~aa~~G~---~V~liek~ 90 (661)
...|+|||+ |.+|+.|+-.|...|+ .|.++|..
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~ 250 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIK 250 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecc
Confidence 468999999 9999999999999998 89999875
No 381
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=70.61 E-value=3.7 Score=45.00 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=31.5
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCCCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFPTR 94 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~~~ 94 (661)
...|+|||+|..|..+|..|+..|. +++|+|.....-
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~ 364 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSY 364 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccc
Confidence 4679999999999999999999997 588898765433
No 382
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=70.45 E-value=2.6 Score=45.96 Aligned_cols=32 Identities=38% Similarity=0.607 Sum_probs=27.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..++|+|+|.+|.++|..|++.|++|+++.+.
T Consensus 365 k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999988764
No 383
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=70.11 E-value=3.9 Score=44.95 Aligned_cols=37 Identities=22% Similarity=0.293 Sum_probs=31.6
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFPT 93 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~~ 93 (661)
....|+|||+|..|+.+|..|+..|. +++|+|.....
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 35679999999999999999999997 58888876543
No 384
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=70.01 E-value=3.1 Score=44.60 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|.-|...|..++++|++|+++|..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5999999999999999999999999999864
No 385
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=69.84 E-value=2.9 Score=41.31 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|+|||+|.+|-++|..|.+.|. +|.|+.+.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999997 68888765
No 386
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=69.82 E-value=3.3 Score=42.62 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=30.7
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFP 92 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~ 92 (661)
...|+|||+|..|..+|..|+..|. +++|+|....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 5689999999999999999999997 5888987643
No 387
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=69.67 E-value=3.3 Score=41.84 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|.|||+|..|...|..+++.|+ +|+++|..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 369999999999999999999998 99999865
No 388
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=69.64 E-value=2.7 Score=42.03 Aligned_cols=34 Identities=18% Similarity=0.081 Sum_probs=30.8
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
...|.|||.|.-|...|..+++.|++|+++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999998763
No 389
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=69.53 E-value=4.7 Score=38.04 Aligned_cols=32 Identities=28% Similarity=0.332 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|..|...|..+++.|.+|.++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999874
No 390
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=69.48 E-value=3.5 Score=43.96 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|.-|...|..++++|++|+++|..
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~ 86 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRN 86 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECc
Confidence 5999999999999999999999999999975
No 391
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=69.16 E-value=3 Score=38.59 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=27.2
Q ss_pred cEEEEC-CcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVG-AGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVG-gG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|+|+| +|..|..++..++..|.+|+++++.
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 72 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGS 72 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 489999 5999999999999999999988764
No 392
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=69.02 E-value=3.5 Score=41.38 Aligned_cols=31 Identities=26% Similarity=0.409 Sum_probs=28.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|||+|.-|...|..|+ .|.+|.++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 36899999999999999999 99999999875
No 393
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=68.96 E-value=3.7 Score=41.70 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|.|||+|..|...|..+++.|+ +|+++|..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 369999999999999999999998 99999864
No 394
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=68.92 E-value=3.8 Score=43.59 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=31.1
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
+..+.|||.|.-|+..|..++++|++|+++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3678999999999999999999999999999863
No 395
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=68.76 E-value=3.3 Score=40.92 Aligned_cols=32 Identities=34% Similarity=0.503 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|+|||+|.+|.+.|..|.+.|.+|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999988888764
No 396
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=68.53 E-value=4.4 Score=37.87 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=28.2
Q ss_pred cEEEEC-CcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVG-AGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVG-gG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+||| +|..|...|..+.+.|.+|.++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 388999 9999999999999999999999864
No 397
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=68.50 E-value=1.7 Score=43.04 Aligned_cols=46 Identities=15% Similarity=0.377 Sum_probs=36.7
Q ss_pred ccccceeeeccccccCCCCCCccchhhhhhHHHHHHHHHHHHHHhcCC
Q psy15089 427 KIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENKP 474 (661)
Q Consensus 427 T~ipGLyAaGe~a~~g~hGanrlgg~~l~~a~v~G~~Ag~~aa~~~~~ 474 (661)
|.+||+|++|+++ .-++|..+++. .+..++.+|+.||..+.++++.
T Consensus 231 ~~~p~i~a~G~~~-~~~~g~~~~gp-~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 231 EVVPGMIVTGMEV-AEIDGAPRMGP-TFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp EEETTEEECTHHH-HHHHTCEECCS-CCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCCEEEEeeeh-hhhcCCCCcCh-HHHHHHHhHHHHHHHHHHHhhh
Confidence 6789999999975 45677766654 4667788999999999998754
No 398
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=68.42 E-value=4.2 Score=42.24 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|+|||+|..|...|..|.+.|++|++++..
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 36999999999999999999999999999865
No 399
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=68.25 E-value=4.3 Score=42.04 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
.-|+|||+|.-|.+.|..|.+.|++|++++...
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 469999999999999999999999999998653
No 400
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=67.79 E-value=3.8 Score=44.06 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|+|||.|..|..+|..|...|.+|+++|..
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999864
No 401
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=67.77 E-value=3.5 Score=40.14 Aligned_cols=31 Identities=26% Similarity=0.281 Sum_probs=28.0
Q ss_pred cEEEECC-c-HHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-G-GAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-G-~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|||.|| | ..|...|..++++|++|+++++.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 4899998 7 69999999999999999999875
No 402
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=67.64 E-value=4.5 Score=41.58 Aligned_cols=32 Identities=28% Similarity=0.221 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|||+|+|+.|+.++..|+..|++|++++..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~ 222 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKATGAEVIVTSSS 222 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEecC
Confidence 46999999999999999998899999988753
No 403
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=67.35 E-value=3.5 Score=41.69 Aligned_cols=30 Identities=23% Similarity=0.338 Sum_probs=28.1
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEe
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITK 89 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek 89 (661)
.|.|||+|..|...|..+++.|.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 388999999999999999999999999987
No 404
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=67.31 E-value=4.4 Score=41.39 Aligned_cols=32 Identities=31% Similarity=0.281 Sum_probs=28.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|+.|+.|+..|...|++|++++..
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 209 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARN 209 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 36999999999999999998899999888754
No 405
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=67.10 E-value=4.3 Score=41.87 Aligned_cols=31 Identities=26% Similarity=0.231 Sum_probs=28.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEe
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITK 89 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek 89 (661)
.-|+|+|.|..|..+|..|.+.|.+|++.|.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 4599999999999999999999999987763
No 406
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=67.02 E-value=4.8 Score=40.93 Aligned_cols=31 Identities=29% Similarity=0.199 Sum_probs=26.9
Q ss_pred cEEEECCcHHHHHHHHHhHHC-CCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAE-GFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~-G~~V~liek~ 90 (661)
.|+|+|+|+.|+.++..|+.. |.+|+.++..
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~ 197 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN 197 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEEESC
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEEECc
Confidence 599999999999999999876 7889888754
No 407
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=66.98 E-value=4.2 Score=41.81 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|.-|.+.|..++++|.+|.++++.
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999999874
No 408
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=66.87 E-value=5.3 Score=38.55 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||.|.-|...|..|++.|.+|++.++.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56999999999999999999999999999875
No 409
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=66.85 E-value=2.6 Score=40.36 Aligned_cols=31 Identities=13% Similarity=0.052 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|..|...|..|.+.|. |+++|+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 469999999999999999999999 9999986
No 410
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=66.84 E-value=4.8 Score=41.43 Aligned_cols=32 Identities=34% Similarity=0.249 Sum_probs=28.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|+.|+.++..|+..|++|++++..
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~ 220 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTS 220 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999888754
No 411
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=66.61 E-value=4.5 Score=40.99 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=28.7
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|.|||+|..|...|..++..|+ +|+++|..
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 369999999999999999999998 88888864
No 412
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=66.42 E-value=3.6 Score=43.13 Aligned_cols=32 Identities=34% Similarity=0.423 Sum_probs=28.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.|+|||+|..|..+|..|...|. +|+++++.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 469999999999999999999998 78888764
No 413
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=66.41 E-value=4.7 Score=42.99 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhC--------CcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCcc
Q psy15089 195 HSLLHTLYGQSLRY--------DCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGY 256 (661)
Q Consensus 195 ~~l~~~L~~~a~~~--------gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~ 256 (661)
..+.+.|.+.+.+. |++|+.++.|++|..+++.+. |. ..+|+ .+.|+.||+|++..
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~---~~~g~--~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VK---TEDNS--VYSADYVMVSASLG 269 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EE---ETTSC--EEEESEEEECSCHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EE---ECCCC--EEEcCEEEEecCHH
Confidence 36777777766544 678999999999998777654 33 25675 38999999999953
No 414
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=66.18 E-value=4.5 Score=41.56 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|+.|+.++..|+..|++|++++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~ 212 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRS 212 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 36999999999999999888889999888864
No 415
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=66.11 E-value=3.4 Score=43.80 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||.|..|+..|..+++.|.+|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4889999999999999999999999999864
No 416
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=65.69 E-value=5.3 Score=41.24 Aligned_cols=31 Identities=29% Similarity=0.224 Sum_probs=27.6
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|||+|+|+.|+.++..|+..|++|++++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~ 227 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 227 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999888899998888854
No 417
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=65.52 E-value=4.7 Score=40.95 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=30.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
+..|.|||+|.-|...|..|+++|.+|.++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 467999999999999999999999999999864
No 418
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=65.50 E-value=4.7 Score=42.33 Aligned_cols=33 Identities=27% Similarity=0.157 Sum_probs=29.8
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.-.|+|||.|..|..+|..|...|.+|++.|..
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999998864
No 419
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=65.48 E-value=5.3 Score=38.99 Aligned_cols=31 Identities=42% Similarity=0.633 Sum_probs=28.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|||+|.+|...|..+.+.|.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999988888764
No 420
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=65.16 E-value=5.1 Score=40.99 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=31.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFP 92 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~ 92 (661)
....|+|||.|..|..+|..|+..|. +++|+|-...
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 35789999999999999999999998 6888987643
No 421
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=65.15 E-value=4.8 Score=40.14 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.0
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.--|.|||.|.-|..-|..++ +|++|+++++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECC
Confidence 457899999999999999999 99999999875
No 422
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=64.83 E-value=5.1 Score=40.40 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.|.|||+|..|...|..+++.|. .|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 469999999999999999999999 89999875
No 423
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=64.74 E-value=4 Score=43.75 Aligned_cols=33 Identities=24% Similarity=0.197 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHC-CC-cEEEEEecC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE-GF-KTAVITKLF 91 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~-G~-~V~liek~~ 91 (661)
..|.|||.|.-|+..|..++++ |+ +|++++...
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3699999999999999999999 99 999999863
No 424
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=64.74 E-value=6.1 Score=37.49 Aligned_cols=32 Identities=22% Similarity=0.298 Sum_probs=29.3
Q ss_pred ccEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|+|.|| |..|...|..|.+.|++|+++.+.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 35999998 999999999999999999999975
No 425
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=64.66 E-value=6.5 Score=36.59 Aligned_cols=30 Identities=27% Similarity=0.345 Sum_probs=28.0
Q ss_pred EEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 61 AVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 61 VlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
|+|+|| |..|...+..|.+.|.+|+++.+.
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 899995 999999999999999999999985
No 426
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=64.64 E-value=5.3 Score=40.12 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=27.7
Q ss_pred cEEEECCcHHHHHHHHHhHHC--CCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAE--GFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~--G~~V~liek~ 90 (661)
.|.|||+|..|...|..+++. |.+|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 488999999999999999985 7889999975
No 427
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=64.58 E-value=5.7 Score=40.56 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=27.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|+|+|+|..|+.++..|+..|++|++++..
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 201 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYGAFVVCTARS 201 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEcCC
Confidence 5999999999999999888899998888753
No 428
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=64.41 E-value=6.3 Score=36.87 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=28.2
Q ss_pred EEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 61 AVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 61 VlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
|+|.|| |..|...+..|.+.|.+|.++.+.
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 899998 999999999999999999999875
No 429
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=64.36 E-value=4.5 Score=41.08 Aligned_cols=32 Identities=28% Similarity=0.233 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|||+|+|+.|+.|+..|...|++|+.++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~ 199 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAMGLRVAAVDID 199 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35999999999999999998899999988753
No 430
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=64.27 E-value=4.6 Score=41.56 Aligned_cols=32 Identities=19% Similarity=0.266 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
--|+|+|+|..|+.++..|+..|++|+++++.
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~ 213 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYGLEVWMANRR 213 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 35999999999999999998899999988864
No 431
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=63.96 E-value=6 Score=40.52 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=27.1
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|+|+|+|+.|+.++..|+..|+ +|++++..
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 205 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 205 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 59999999999999988888999 78888753
No 432
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=63.94 E-value=5.4 Score=42.90 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|.-|...|..++++|++|+++|+.
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 5899999999999999999999999999865
No 433
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=63.84 E-value=5.6 Score=40.55 Aligned_cols=31 Identities=26% Similarity=0.240 Sum_probs=27.7
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|+|+|+|..|+.++..|+..|+ +|+++++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~ 201 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASGAYPVIVSEPS 201 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 59999999999999999988999 89888753
No 434
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=63.74 E-value=6.1 Score=39.92 Aligned_cols=31 Identities=19% Similarity=0.109 Sum_probs=27.8
Q ss_pred cEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~ 179 (333)
T 1v3u_A 148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS 179 (333)
T ss_dssp EEEEESTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5899997 999999999999999999988753
No 435
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=63.67 E-value=5.6 Score=39.33 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||.|..|...|..+++.|++|+++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCC
Confidence 5899999999999999999999999999875
No 436
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=63.55 E-value=5.6 Score=40.80 Aligned_cols=30 Identities=23% Similarity=0.215 Sum_probs=27.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEE
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVIT 88 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~lie 88 (661)
.-|+|+|.|..|..+|..|.+.|.+|++.|
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD 205 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVAD 205 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEe
Confidence 569999999999999999999999999765
No 437
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=63.50 E-value=6.4 Score=40.07 Aligned_cols=32 Identities=28% Similarity=0.232 Sum_probs=28.4
Q ss_pred ccEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~ 203 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG 203 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC
Confidence 35999999 899999999999999999998864
No 438
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=63.40 E-value=5.5 Score=40.96 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=30.3
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
....|.|||.|.-|...|..+++.|.+|+++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3457999999999999999999999999999875
No 439
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=63.05 E-value=5.7 Score=39.89 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=28.0
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|.|||+|..|...|..++..|. +|+++|..
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 58999999999999999999996 88888864
No 440
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=63.02 E-value=5.4 Score=41.98 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.-|+|+|+|.-|...+..|.+.|++|++++..
T Consensus 36 ~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~ 67 (419)
T 4e4t_A 36 AWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPD 67 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 46999999999999999999999999999753
No 441
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=62.98 E-value=5.8 Score=39.62 Aligned_cols=32 Identities=28% Similarity=0.323 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||.|.-|...|..+++.|++|+++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 36999999999999999999999999999864
No 442
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=62.91 E-value=7.2 Score=35.74 Aligned_cols=32 Identities=25% Similarity=0.442 Sum_probs=29.2
Q ss_pred cEEEECC-cHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 60 DAVVVGA-GGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 60 DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-|+|+|+ |..|...+..|.+.|.+|+++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 4899998 9999999999999999999999853
No 443
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=62.85 E-value=4.9 Score=40.63 Aligned_cols=31 Identities=32% Similarity=0.533 Sum_probs=28.1
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC--cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF--KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~ 90 (661)
.|.|||+|..|...|..+++.|. +|++++..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48899999999999999999998 89999864
No 444
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=62.77 E-value=5.9 Score=39.82 Aligned_cols=31 Identities=35% Similarity=0.515 Sum_probs=27.8
Q ss_pred cEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
+|+|+|+ |+.|+.|+.-|+..|++|+.++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~ 180 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGR 180 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence 4999998 999999999988899999998854
No 445
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=62.76 E-value=4.5 Score=41.17 Aligned_cols=31 Identities=23% Similarity=0.186 Sum_probs=27.8
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|+|+|..|+.++..|+..|++|+++++.
T Consensus 167 ~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~ 197 (339)
T 1rjw_A 167 WVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 197 (339)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5999999999999999999999999888753
No 446
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=62.66 E-value=5.2 Score=41.36 Aligned_cols=32 Identities=25% Similarity=0.282 Sum_probs=27.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.|+|+|+|+.|+.|+..|+..|+ +|++++..
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~ 227 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDID 227 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 469999999999999998888898 78888754
No 447
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=62.65 E-value=5.7 Score=40.72 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=28.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+|+.|+.++..|+..|++|++++..
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~ 213 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAMGHHVTVISSS 213 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 36999999999999999888889999888864
No 448
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=62.60 E-value=6.3 Score=41.67 Aligned_cols=36 Identities=31% Similarity=0.406 Sum_probs=31.5
Q ss_pred ccccEEEECCcHHHHHHHHHhHHCCC-cEEEEEecCC
Q psy15089 57 HQFDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKLFP 92 (661)
Q Consensus 57 ~~~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~~~ 92 (661)
....|+|||+|..|..+|..|+..|. +++|+|....
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 45789999999999999999999997 6899987643
No 449
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=62.58 E-value=5.7 Score=40.84 Aligned_cols=30 Identities=17% Similarity=0.189 Sum_probs=28.0
Q ss_pred EEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 61 AVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 61 VlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
|+|||+|..|...|..|.+.|++|++++..
T Consensus 2 iliiG~g~~g~~~~~a~~~~G~~v~~~~~~ 31 (369)
T 3aw8_A 2 IGILGGGQLGRMLALAGYPLGLSFRFLDPS 31 (369)
T ss_dssp EEEECCSHHHHHHHHHHTTBTCCEEEEESC
T ss_pred EEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 899999999999999999999999999864
No 450
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=62.49 E-value=6.2 Score=40.15 Aligned_cols=32 Identities=31% Similarity=0.311 Sum_probs=28.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.|+|+|+|..|+.++..|...|+ +|++++..
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~ 198 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 369999999999999998888999 89988753
No 451
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=62.47 E-value=6 Score=39.70 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||.|.-|...|..|++.|++|+++++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 36999999999999999999999999999875
No 452
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=62.00 E-value=7.6 Score=38.02 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
-|+|.|+|..|...+..|.+.|.+|+++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 59999999999999999999999999999864
No 453
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=61.95 E-value=6.3 Score=38.66 Aligned_cols=31 Identities=26% Similarity=0.193 Sum_probs=27.9
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|..|...|..+.+.|.+|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3889999999999999999999999988764
No 454
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=61.82 E-value=7 Score=42.85 Aligned_cols=34 Identities=21% Similarity=0.100 Sum_probs=31.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEecCC
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFP 92 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~~~ 92 (661)
-.|+|||+|..|...|-.|.+.|.+|++||+.+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 5799999999999999999999999999998753
No 455
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=61.61 E-value=6.2 Score=40.30 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=27.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.|+|+|+|+.|+.|+..|...|+ +|++++..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 200 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSR 200 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCSSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 369999999999999888888898 78888753
No 456
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=61.56 E-value=5.9 Score=40.62 Aligned_cols=31 Identities=23% Similarity=0.167 Sum_probs=27.5
Q ss_pred cEEEECCcHHHHHHHHHhHHC-CCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAE-GFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~-G~~V~liek~ 90 (661)
.|+|+|+|+.|+.|+..|+.. |++|++++..
T Consensus 189 ~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~ 220 (359)
T 1h2b_A 189 YVAIVGVGGLGHIAVQLLKVMTPATVIALDVK 220 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 699999999999999888888 9999888853
No 457
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=61.53 E-value=6 Score=40.07 Aligned_cols=32 Identities=25% Similarity=0.183 Sum_probs=28.3
Q ss_pred ccEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~ 183 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGG 183 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999998 999999999999999999988854
No 458
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=61.40 E-value=6.3 Score=39.30 Aligned_cols=31 Identities=29% Similarity=0.358 Sum_probs=28.7
Q ss_pred cEEEEC-CcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVG-AGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVG-gG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.||| .|..|.+.|..+++.|.+|.++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 599999 9999999999999999999999864
No 459
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=61.19 E-value=5.7 Score=41.93 Aligned_cols=31 Identities=13% Similarity=0.287 Sum_probs=28.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||.|.-|+..|..+++ |.+|++++..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 469999999999999999998 9999999875
No 460
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=61.10 E-value=6 Score=40.26 Aligned_cols=32 Identities=28% Similarity=0.292 Sum_probs=28.4
Q ss_pred ccEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+ |+.|+.++..|+..|++|++++..
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~ 193 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR 193 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 46999998 999999999999999999988864
No 461
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=61.03 E-value=7.9 Score=41.18 Aligned_cols=57 Identities=18% Similarity=0.078 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeEEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEEcCCccc
Q psy15089 195 HSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYG 257 (661)
Q Consensus 195 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~Ak~VIlAtGg~~ 257 (661)
..+.+.|.+.+ |++|+.++.|++|..+++. ++|...+..+|+ .+.|+.||+|++...
T Consensus 238 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~-~~v~~~~~~~g~--~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 238 QVLIDALAASL---GDAAHVGARVEGLAREDGG-WRLIIEEHGRRA--ELSVAQVVLAAPAHA 294 (478)
T ss_dssp HHHHHHHHHHH---GGGEESSEEEEEEECC--C-CEEEEEETTEEE--EEECSEEEECSCHHH
T ss_pred HHHHHHHHHHh---hhhEEcCCEEEEEEecCCe-EEEEEeecCCCc--eEEcCEEEECCCHHH
Confidence 46777777655 6799999999999887654 344432212343 589999999998643
No 462
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=60.93 E-value=8.1 Score=36.86 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=28.0
Q ss_pred EEEECC-cHHHHHHHHHhHHCCCcEEEEEecC
Q psy15089 61 AVVVGA-GGAGLRAAFGLVAEGFKTAVITKLF 91 (661)
Q Consensus 61 VlVVGg-G~AGl~AA~~aa~~G~~V~liek~~ 91 (661)
|||.|| |.-|...|..|++.|++|+++++..
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 789987 8999999999999999999998853
No 463
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=60.76 E-value=4.4 Score=42.36 Aligned_cols=29 Identities=21% Similarity=0.300 Sum_probs=27.0
Q ss_pred cEEEECCcHHHHHHHHHhHH-CCCcEEEEE
Q psy15089 60 DAVVVGAGGAGLRAAFGLVA-EGFKTAVIT 88 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~-~G~~V~lie 88 (661)
.|.|||+|..|...|..|++ .|.+|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 58999999999999999988 599999998
No 464
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=60.65 E-value=8.9 Score=38.32 Aligned_cols=32 Identities=31% Similarity=0.477 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||.|.-|...|..+++.|++|++.++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999865
No 465
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=60.57 E-value=6.2 Score=41.14 Aligned_cols=31 Identities=29% Similarity=0.205 Sum_probs=27.1
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|+|+|+|+.|+.|+..|+..|+ +|+.++..
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 219 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLGAACVIVGDQN 219 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 69999999999999888888898 89888853
No 466
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=60.48 E-value=7.7 Score=37.00 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=27.4
Q ss_pred cEEEECC-----------------cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-----------------GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-----------------G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|||-|| |.-|.+.|..+++.|++|+++...
T Consensus 10 ~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 10 NIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp EEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 4888888 789999999999999999999754
No 467
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=60.40 E-value=6.8 Score=39.53 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC--cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF--KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~ 90 (661)
..|.|||+|..|.+.|+.++..|. .|+++|..
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999999987 79999864
No 468
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=60.40 E-value=4.2 Score=41.87 Aligned_cols=31 Identities=29% Similarity=0.257 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||+|.-|...|..|++.|.+|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999999998864
No 469
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=60.26 E-value=6.5 Score=39.13 Aligned_cols=32 Identities=22% Similarity=0.165 Sum_probs=28.2
Q ss_pred ccEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~ 159 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999998 999999999999999999988864
No 470
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=60.18 E-value=4.9 Score=40.21 Aligned_cols=30 Identities=27% Similarity=0.377 Sum_probs=27.9
Q ss_pred cEEEECCcHHHHHHHHHhHHC-----C-CcEEEEEe
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAE-----G-FKTAVITK 89 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~-----G-~~V~liek 89 (661)
.|.|||+|.-|...|..|++. | .+|+++++
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 699999999999999999998 9 89999976
No 471
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=60.11 E-value=6.7 Score=40.46 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=27.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.|+|+|+|+.|+.++..|+..|+ +|++++..
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 229 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIAGASRIIAIDIN 229 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 369999999999999998888999 68887653
No 472
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=60.04 E-value=7.4 Score=39.39 Aligned_cols=32 Identities=13% Similarity=0.076 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
..|.|||+|..|.+.|..++..|+ .|+++|..
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 469999999999999999999998 89999865
No 473
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=59.96 E-value=5.5 Score=41.72 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=27.5
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|.|||.|..|+..|..+++ |.+|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 48899999999999999999 9999999874
No 474
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=59.88 E-value=8.3 Score=37.86 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=26.6
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEe
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITK 89 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek 89 (661)
..++|+|+|.|+-++++.|++.|. +|.|+.+
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nR 157 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDP 157 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC
Confidence 469999999999999999999997 4666654
No 475
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=59.83 E-value=5.8 Score=40.36 Aligned_cols=31 Identities=23% Similarity=0.179 Sum_probs=27.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHC--CCcEEEEEe
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAE--GFKTAVITK 89 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~--G~~V~liek 89 (661)
-.|+|+|+|+.|+.++..|+.. |++|++++.
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~ 204 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGISR 204 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC
Confidence 3699999999999999888888 999888874
No 476
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=59.81 E-value=6.9 Score=40.35 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=26.4
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEe
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITK 89 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek 89 (661)
-.|+|+|+|+.|+.|+.-|...|+ +|++++.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGATTVILSTR 215 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 469999999999999988888999 6777764
No 477
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=59.79 E-value=5.9 Score=39.72 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=27.0
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEE
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVIT 88 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~lie 88 (661)
-.|+|+|+|+.|+.|+.-|...|++|+.++
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAGYVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEE
Confidence 469999999999999988888899998887
No 478
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=59.77 E-value=7.3 Score=39.26 Aligned_cols=31 Identities=32% Similarity=0.377 Sum_probs=27.7
Q ss_pred cEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
.|+|+|+ |+.|+.++..|+..|++|++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~ 184 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGN 184 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999998 999999999888899999888864
No 479
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=59.77 E-value=6.5 Score=39.74 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=28.2
Q ss_pred ccEEEEC-CcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVG-AGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVG-gG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-.|+|+| +|+.|+.++..|+..|++|++++..
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~ 182 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVAST 182 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3589999 7999999999999999999988864
No 480
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=59.68 E-value=7.3 Score=38.24 Aligned_cols=31 Identities=29% Similarity=0.256 Sum_probs=27.6
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC--cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF--KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~ 90 (661)
.|.|||.|..|.+.|..+++.|. +|+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 48999999999999999999998 88888764
No 481
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=59.58 E-value=7.8 Score=39.95 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=28.6
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|+|||+|..|...|..|.+.|++|++++..
T Consensus 3 ~Ililg~g~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 3 KIGIIGGGQLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4899999999999999999999999999874
No 482
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=59.56 E-value=6.7 Score=39.81 Aligned_cols=31 Identities=16% Similarity=-0.014 Sum_probs=27.6
Q ss_pred cEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~ 189 (345)
T 2j3h_A 158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189 (345)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5899997 999999999999999999888754
No 483
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=59.28 E-value=7.7 Score=38.86 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=29.2
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||+|..|...|..+++.|.+|+++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999864
No 484
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=59.27 E-value=8.5 Score=39.40 Aligned_cols=32 Identities=22% Similarity=0.182 Sum_probs=27.3
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCc-EEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFK-TAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~-V~liek~ 90 (661)
-.|||+|+|+.|+.|+.-|+..|++ |++++..
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 213 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAAGACPLVITDID 213 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3699999999999999988889997 7777743
No 485
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=59.10 E-value=7.5 Score=39.13 Aligned_cols=32 Identities=28% Similarity=0.222 Sum_probs=28.8
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC--cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF--KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~--~V~liek~ 90 (661)
..|.|||.|..|.+.|..+++.|. +|+++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 369999999999999999999999 88888864
No 486
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=59.09 E-value=6.1 Score=39.61 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=27.8
Q ss_pred cEEEECCcHHHHHHHHHhHHCC--CcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEG--FKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G--~~V~liek~ 90 (661)
.|.|||+|..|...|..+++.| .+|+++++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 4899999999999999999999 689999864
No 487
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=59.02 E-value=7.2 Score=40.78 Aligned_cols=31 Identities=16% Similarity=0.122 Sum_probs=29.2
Q ss_pred cccEEEECCcHHHHHHHHHhHHCCCcEEEEE
Q psy15089 58 QFDAVVVGAGGAGLRAAFGLVAEGFKTAVIT 88 (661)
Q Consensus 58 ~~DVlVVGgG~AGl~AA~~aa~~G~~V~lie 88 (661)
..-|+|+|||..|.+.+..|.+.|++|++++
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4579999999999999999999999999999
No 488
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=58.85 E-value=5.4 Score=40.20 Aligned_cols=33 Identities=15% Similarity=0.065 Sum_probs=29.1
Q ss_pred cccEEEECCc-HHHHHHHHHhHHCCCcEEEEEec
Q psy15089 58 QFDAVVVGAG-GAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 58 ~~DVlVVGgG-~AGl~AA~~aa~~G~~V~liek~ 90 (661)
...|+|||+| ..|..+|..|...|+.|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4589999999 57999999999999999999764
No 489
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=58.81 E-value=7.6 Score=37.66 Aligned_cols=30 Identities=20% Similarity=0.133 Sum_probs=26.0
Q ss_pred EEEECCc---HHHHHHHHHhHHCCCcEEEEEec
Q psy15089 61 AVVVGAG---GAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 61 VlVVGgG---~AGl~AA~~aa~~G~~V~liek~ 90 (661)
+||-|++ ..|...|..++++|++|++.++.
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 6888853 57999999999999999999875
No 490
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=58.75 E-value=7.3 Score=40.13 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=26.9
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|+|+|+|+.|+.++..|+..|+ +|++++..
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 225 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 225 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 59999999999999999888998 68887753
No 491
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=58.61 E-value=8.5 Score=39.31 Aligned_cols=31 Identities=35% Similarity=0.353 Sum_probs=27.8
Q ss_pred cEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|+|+|+ |..|+.++..|+..|++|+++++.
T Consensus 173 ~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~ 204 (351)
T 1yb5_A 173 SVLVHGASGGVGLAACQIARAYGLKILGTAGT 204 (351)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999997 999999999999999999888754
No 492
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=58.57 E-value=7.8 Score=37.86 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|+|.|+|..|...+..|.+.|.+|+++.+.
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 5999999999999999999999999999875
No 493
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9
Probab=58.50 E-value=7.7 Score=39.19 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=28.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|.||||| -|+..+..|.+.|++|++++..
T Consensus 4 ~I~~lGsg-l~~~~~~aAk~lG~~viv~d~~ 33 (320)
T 2pbz_A 4 IVSTIASH-SSLQILLGAKKEGFKTRLYVSP 33 (320)
T ss_dssp CEEEESST-THHHHHHHHHHTTCCEEEEECT
T ss_pred EEEEEcCH-hHHHHHHHHHHCCCEEEEEECC
Confidence 48999999 9999999999999999999986
No 494
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=58.36 E-value=8.4 Score=40.04 Aligned_cols=31 Identities=32% Similarity=0.194 Sum_probs=26.3
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|+|+|+|+.|+.|+.-|+..|+ +|++++..
T Consensus 188 ~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~ 219 (398)
T 1kol_A 188 TVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 219 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 59999999999999888888898 57777653
No 495
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=58.16 E-value=7.8 Score=38.45 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=27.6
Q ss_pred cEEEECCc---HHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGAG---GAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG---~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-+||.||+ ..|...|..+++.|++|+++++.
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 48899985 78999999999999999999875
No 496
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=58.09 E-value=6.1 Score=39.87 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~~V~liek~ 90 (661)
..|.|||.|..|...|..+++.|.+|+++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 46999999999999999999999999999875
No 497
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=58.09 E-value=9.4 Score=36.29 Aligned_cols=31 Identities=26% Similarity=0.412 Sum_probs=27.6
Q ss_pred cEEEECC-cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA-GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg-G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|||.|+ |..|...|..+++.|++|+++.+.
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4888987 899999999999999999999864
No 498
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=58.08 E-value=7.4 Score=38.04 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=27.8
Q ss_pred cEEEECC---cHHHHHHHHHhHHCCCcEEEEEec
Q psy15089 60 DAVVVGA---GGAGLRAAFGLVAEGFKTAVITKL 90 (661)
Q Consensus 60 DVlVVGg---G~AGl~AA~~aa~~G~~V~liek~ 90 (661)
-|||.|| |..|...|..+++.|++|+++++.
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 3899997 689999999999999999999875
No 499
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=58.07 E-value=6.4 Score=40.55 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=26.9
Q ss_pred ccEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 59 FDAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 59 ~DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
-.|+|+|+|+.|+.++..|+..|+ +|++++..
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~ 225 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTH 225 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 369999999999999988888898 68877643
No 500
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=57.98 E-value=7.7 Score=39.97 Aligned_cols=31 Identities=26% Similarity=0.417 Sum_probs=26.9
Q ss_pred cEEEECCcHHHHHHHHHhHHCCC-cEEEEEec
Q psy15089 60 DAVVVGAGGAGLRAAFGLVAEGF-KTAVITKL 90 (661)
Q Consensus 60 DVlVVGgG~AGl~AA~~aa~~G~-~V~liek~ 90 (661)
.|+|+|+|+.|+.++..|...|+ +|+.++..
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~ 226 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLN 226 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 59999999999999999888998 68887643
Done!