Diaphorina citri psyllid: psy15089

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-
MSGLLRVPSLLSKCANPLNGSFGSIIGVKQFHFTIHGQGDSKVKSDAISREYPVVDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGPDKDHVYLQLHHLPPEDLHQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENKPGAPIKPFAANAGESSVANLDWVRHAKGDITTADLRLTMQKTMQTYAAVFRTQETLQEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRGAHAREDFKVRVDELDYAKPLEGQVPKPIEEHWRKHTLTDVDVNTGKVKIYYRPVIDKTLDAKECATIAPAIRSY
cccccccccccccccccccccccccccccCEEEEEccccccccccccccccccEEEEEEcEEEEcccHHHHHHHHHHHHccccEEEEEccccccccHHHHHHccHHccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHccccHHHHHHHHHHHHHHHccccEEEEEEEEHHHEEccEEEEEEEEEcccccEEEEEcccEEECcccccccccccccccccccHHHHHHHHccccccccccEEccccccccccCECcccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEEcccccHHHHHHHccccHHHHHHHccccccccccccccccccccccCCcccccEEEECccccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHccccEECccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEcccccCEEEEEEcccccccccccccccccccccc
************************IIGVKQFHFTIHGQGDS*V*SDAISREYPVVDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGPDKDHVYLQLHHLPPEDLHQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAE**********FA*****SSVANLDWVRHAKGDITTADLRLTMQKTMQTYAAVFRTQETLQEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENR******HAREDFKVRVDELDYAKPLEGQVPKPIEEHWRKHTLTDVDVNTGKVKIYYRPVIDKTLDAKECATIAPAIRSY
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MSGLLRVPSLLSKCANPLNGSFGSIIGVKQFHFTIHGQGDSKVKSDAISREYPVVDHQFDAVVVGAGGAGLRAAFGLVAEGFKTAVITKLFPTRSHTVAAQGGINAALGNMEEDDWHWHMYDTVKGSDWLGDQDAIHYMTREAPKAVIELENYGMPFSRTTDGKIYQRAFGGQSLKYGKGGQAHRCCAVADRTGHSLLHTLYGQSLRYDCNYFVEYFALDLIIENGECKGVIALCLEDGSIHRFNANNTVLATGGYGRAYFSCTSAHTCTGDGTAMISRAGLPNEDLEFVQFHPTGIYGAGCLITEGCRGEGGYLINSEGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGVGPDKDHVYLQLHHLPPEDLHQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQVLTHVNGQDKIIHGLYAAGEASCSSVHGANRLGANSLLDLVVFGRACAKTIAEENKPGAPIKPFAANAGESSVANLDWVRHAKGDITTADLRLTMQKTMQTYAAVFRTQETLQEGCNKMAALYKDLAHLKVFDRSLIWNTDLVETLELQNLMINAIQTMFAAENRKESRGAHAREDFKVRVDELDYAKPLEGQVPKPIEEHWRKHTLTDVDVNTGKVKIYYRPVIDKTLDAKECATIAPAIRSY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). Can act as a tumor suppressor.very confidentP31039
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).very confidentQ7ZVF3
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (By similarity). Can act as a tumor suppressor.very confidentQ5R616

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005739 [CC]mitochondrionvery confidentGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006105 [BP]succinate metabolic processconfidentGO:0043648, GO:0044710, GO:0006082, GO:0044237, GO:0009987, GO:0019752, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:0043436
GO:0005749 [CC]mitochondrial respiratory chain complex IIconfidentGO:0044464, GO:0031975, GO:0043229, GO:0005739, GO:0043227, GO:0043226, GO:0005737, GO:0005575, GO:0031090, GO:0016020, GO:0045283, GO:0044444, GO:0045281, GO:0044455, GO:0031967, GO:0031966, GO:0043234, GO:0045273, GO:0045257, GO:0032991, GO:0043231, GO:0019866, GO:0005623, GO:0005622, GO:0044446, GO:0005743, GO:0005740, GO:0005746, GO:0044429, GO:0044424, GO:0044425, GO:0070469, GO:0044422
GO:0008177 [MF]succinate dehydrogenase (ubiquinone) activityconfidentGO:0016627, GO:0016635, GO:0003824, GO:0003674, GO:0000104, GO:0016491
GO:0007399 [BP]nervous system developmentconfidentGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0005524 [MF]ATP bindingconfidentGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0045335 [CC]phagocytic vesicleconfidentGO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0006099 [BP]tricarboxylic acid cycleconfidentGO:0044238, GO:0044710, GO:0015980, GO:0009987, GO:0044237, GO:0009060, GO:0008150, GO:0008152, GO:0045333, GO:0006091, GO:0055114
GO:0006121 [BP]mitochondrial electron transport, succinate to ubiquinoneconfidentGO:0044710, GO:0015980, GO:0006793, GO:0016310, GO:0009987, GO:0044237, GO:0006796, GO:0022900, GO:0045333, GO:0008152, GO:0022904, GO:0008150, GO:0006091, GO:0042775, GO:0042773, GO:0055114, GO:0006119
GO:0005515 [MF]protein bindingconfidentGO:0003674, GO:0005488
GO:0050897 [MF]cobalt ion bindingconfidentGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0050660 [MF]flavin adenine dinucleotide bindingconfidentGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265
GO:0005618 [CC]cell wallconfidentGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0045282 [CC]plasma membrane succinate dehydrogenase complexconfidentGO:0043234, GO:0045273, GO:0032991, GO:0045274, GO:0044459, GO:0016020, GO:0044464, GO:0045281, GO:0005622, GO:0005575, GO:0071944, GO:0005623, GO:0005886, GO:0044424, GO:0044425, GO:0070469, GO:0070470
GO:0018991 [BP]ovipositionprobableGO:0032501, GO:0048609, GO:0032504, GO:0019098, GO:0050896, GO:0044706, GO:0007610, GO:0022414, GO:0008150, GO:0033057, GO:0000003, GO:0051704
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0040010 [BP]positive regulation of growth rateprobableGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0040007 [BP]growthprobableGO:0008150
GO:0009055 [MF]electron carrier activityprobableGO:0003674
GO:0010171 [BP]body morphogenesisprobableGO:0032502, GO:0048856, GO:0044767, GO:0008150, GO:0009653, GO:0044699
GO:0046956 [BP]positive phototaxisprobableGO:0040011, GO:0009628, GO:0009605, GO:0042330, GO:0042331, GO:0009314, GO:0050896, GO:0009453, GO:0009416, GO:0052128, GO:0008150
GO:0004776 [MF]succinate-CoA ligase (GDP-forming) activityprobableGO:0016878, GO:0016405, GO:0003824, GO:0003674, GO:0004774, GO:0016874, GO:0016877
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0044351 [BP]macropinocytosisprobableGO:0006897, GO:0016192, GO:0006907, GO:0006810, GO:0044765, GO:0008150, GO:0051234, GO:0051179, GO:0044699
GO:0009507 [CC]chloroplastprobableGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.3.-.-Acting on the CH-CH group of donors.probable
1.3.5.-With a quinone or related compound as acceptor.probable
1.3.5.111-cis-retinol dehydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2H88, chain A
Confidence level:very confident
Coverage over the Query: 50-661
View the alignment between query and template
View the model in PyMOL