Query psy15092
Match_columns 225
No_of_seqs 197 out of 904
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 20:22:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15092.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15092hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zkz_A Growth/differentiation 100.0 5.2E-39 1.8E-43 249.6 7.3 101 125-225 5-108 (110)
2 3evs_B Growth/differentiation 100.0 4.6E-39 1.6E-43 252.4 6.2 101 125-225 13-115 (117)
3 2qcq_A Bone morphogenetic prot 100.0 7.5E-39 2.5E-43 248.7 7.2 100 126-225 6-108 (110)
4 2h62_A BMP-2, BMP-2A, bone mor 100.0 3.7E-39 1.3E-43 251.9 5.0 101 125-225 11-112 (114)
5 2r52_A BMP-6, bone morphogenet 100.0 1.6E-38 5.4E-43 257.2 7.4 101 125-225 39-141 (143)
6 1lxi_A Bone morphogenetic prot 100.0 2.5E-38 8.5E-43 255.0 5.2 101 125-225 35-137 (139)
7 2arp_A Inhibin beta A chain; c 100.0 1.1E-36 3.7E-41 238.5 4.9 104 119-225 4-114 (116)
8 2tgi_A Transforming growth fac 100.0 1.3E-35 4.4E-40 231.2 5.9 104 116-225 4-110 (112)
9 3hh2_A Growth/differentiation 100.0 1.3E-34 4.4E-39 224.5 6.4 103 116-225 3-107 (109)
10 3rjr_A Transforming growth fac 100.0 7.7E-32 2.6E-36 246.9 6.2 129 91-225 226-361 (363)
11 2ask_A Artemin; glial cell der 99.9 4.2E-28 1.4E-32 188.8 2.5 89 125-225 13-110 (113)
12 1agq_A GDNF, glial cell-derive 99.9 1.2E-26 4E-31 185.0 4.0 89 125-225 39-133 (135)
13 1zkz_A Growth/differentiation 99.5 1.5E-14 5.2E-19 111.7 2.5 46 87-132 5-50 (110)
14 2arp_A Inhibin beta A chain; c 99.4 1.2E-14 4.2E-19 113.2 1.3 43 86-128 7-49 (116)
15 2qcq_A Bone morphogenetic prot 99.4 2.1E-14 7.3E-19 110.9 2.3 43 87-129 5-47 (110)
16 2h62_A BMP-2, BMP-2A, bone mor 99.4 2E-14 6.9E-19 111.7 1.7 46 86-131 10-55 (114)
17 3evs_B Growth/differentiation 99.4 2.5E-14 8.5E-19 111.7 2.0 44 86-129 12-55 (117)
18 2r52_A BMP-6, bone morphogenet 99.4 4E-14 1.4E-18 114.2 3.0 48 86-133 38-85 (143)
19 1lxi_A Bone morphogenetic prot 99.4 3.1E-14 1.1E-18 114.3 1.0 47 86-132 34-80 (139)
20 3hh2_A Growth/differentiation 99.4 6.5E-14 2.2E-18 108.0 1.4 41 87-128 12-52 (109)
21 2tgi_A Transforming growth fac 99.3 1.6E-13 5.4E-18 106.3 1.3 43 86-129 11-54 (112)
22 3rjr_A Transforming growth fac 99.1 2.4E-11 8.3E-16 111.1 1.5 41 87-128 263-304 (363)
23 2ask_A Artemin; glial cell der 98.5 3.3E-08 1.1E-12 76.5 1.3 39 86-126 12-50 (113)
24 1agq_A GDNF, glial cell-derive 98.3 1.9E-07 6.4E-12 74.2 2.1 39 86-126 38-76 (135)
25 2k8p_A Sclerostin; WNT signall 73.1 4.9 0.00017 33.0 5.0 36 188-225 106-142 (189)
No 1
>1zkz_A Growth/differentiation factor 2; glycoprotein, growth factor, cytokine, hormone-growth factor; 2.33A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=249.57 Aligned_cols=101 Identities=36% Similarity=0.830 Sum_probs=96.6
Q ss_pred CCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCceeccccCceEE
Q psy15092 125 FPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCCVPETLTPLRV 202 (225)
Q Consensus 125 ~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCCvP~~~~~l~i 202 (225)
...|+|++|+|+|+||||++|||+|++|+|+||.|+|++++...+++||||++|++++..+ .+++|||+|++|++|+|
T Consensus 5 ~~~C~r~~l~VdF~dlGW~~WIiaP~gy~a~yC~G~C~~~~~~~~~~tnHaivq~l~~~~~~~~~~~pCCvPt~l~~ls~ 84 (110)
T 1zkz_A 5 GSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVTPTKHAIVQTLVHLKFPTKVGKACCVPTKLSPISV 84 (110)
T ss_dssp CCBSEEEEEEEETTTTTCTTTEEECSEEEEEEEESBCCSSCCTTSCCCHHHHHHHHHHHHSTTTSCCCCEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEeeccCCcceEECCCceEeEEeEeECCCCcccccCCCchHHHHHHHHhcCCCCCCCCcccceeEccEEE
Confidence 3569999999999999999999999999999999999999988899999999999999887 58999999999999999
Q ss_pred EEEeCCCeEEEe-EeCCeEEccCC
Q psy15092 203 LYQESPYITVLR-YFQDMRVESCG 225 (225)
Q Consensus 203 ly~~~~g~i~~~-~~~nMiV~~Cg 225 (225)
||+|++|+|+++ +|+||+|++||
T Consensus 85 ly~d~~~~v~~~~~~~~Mvv~~Cg 108 (110)
T 1zkz_A 85 LYKDDMGVPTLKYHYEGMSVAECG 108 (110)
T ss_dssp EEECTTCCEEEEEEEEEEEEEEEE
T ss_pred EEEeCCCCEEEeeEeCCEEEEecc
Confidence 999999999999 99999999997
No 2
>3evs_B Growth/differentiation factor 5; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Homo sapiens} SCOP: g.17.1.0 PDB: 1waq_A 3qb4_A 2bhk_A
Probab=100.00 E-value=4.6e-39 Score=252.40 Aligned_cols=101 Identities=42% Similarity=0.903 Sum_probs=96.0
Q ss_pred CCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCceeccccCceEE
Q psy15092 125 FPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCCVPETLTPLRV 202 (225)
Q Consensus 125 ~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCCvP~~~~~l~i 202 (225)
...|+|++|+|+|+||||++|||+|++|+|+||.|.|++++...+++||||+||++++..+ .+++|||+|++|++|+|
T Consensus 13 ~~~C~r~~l~V~F~dlGW~~WIiaP~gy~a~yC~G~C~~p~~~~~~~tnHa~iq~l~~~~~p~~~~~pCCvPt~l~~ls~ 92 (117)
T 3evs_B 13 KARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISI 92 (117)
T ss_dssp -CBSEEECCEEETGGGTGGGTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTCCCCCEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEHHHCCCcceeeCCCcccceeeeeECCCCcccccCCchHHHHHHHHHhcCCCCCCCCCEeceeeccEEE
Confidence 4569999999999999999999999999999999999999888889999999999999888 78999999999999999
Q ss_pred EEEeCCCeEEEeEeCCeEEccCC
Q psy15092 203 LYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 203 ly~~~~g~i~~~~~~nMiV~~Cg 225 (225)
||+|++++|++++|+||+|++||
T Consensus 93 ly~d~~~~v~~~~~~~Mvv~~Cg 115 (117)
T 3evs_B 93 LFIDSANNVVYKQYEDMVVESCG 115 (117)
T ss_dssp EEECTTSCEEEEEEEEEEEEEEE
T ss_pred EEEeCCCCEEEEEcCCeEEeecc
Confidence 99999899999999999999997
No 3
>2qcq_A Bone morphogenetic protein 3; BMP, TGF-beta, signaling protein; 2.21A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=248.68 Aligned_cols=100 Identities=48% Similarity=1.016 Sum_probs=95.0
Q ss_pred CCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC---CCCCCceeccccCceEE
Q psy15092 126 PIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS---GTPGPCCVPETLTPLRV 202 (225)
Q Consensus 126 ~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~---~~~~pCCvP~~~~~l~i 202 (225)
..|+|++|+|+|+||||++|||+|++|+|+||.|.|+++++..++++|||++|++++..+ .+++|||+|++|++|+|
T Consensus 6 ~~C~r~~l~VdF~dlGW~~WIiaP~~y~a~yC~G~C~~pl~~~~~~tnHa~vq~l~~~~~~~~~~~~pCCvPt~l~~ls~ 85 (110)
T 2qcq_A 6 RNCARRYLKVDFADIGWSEWIISPKSFDAYYCSGACQFPMPKSLKPSNHATIQSIVRAVGVVPGIPEPCCVPEKMSSLSI 85 (110)
T ss_dssp SBSEEECCEEETTTTTCTTTEEECSEEECCEEECBCCSSCCGGGCCCHHHHHHHHHHHTCCSTTCCCCCEEECSEEEEEE
T ss_pred CCcEEEEEEEEeeccCCcceEECCCceEeEEeEeECCCCcccccCCChhHHHHHHHHhccCCCCCCCCcCCCeeEccEEE
Confidence 459999999999999999999999999999999999999888889999999999999875 67899999999999999
Q ss_pred EEEeCCCeEEEeEeCCeEEccCC
Q psy15092 203 LYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 203 ly~~~~g~i~~~~~~nMiV~~Cg 225 (225)
||+|++|++++++|+||+|++||
T Consensus 86 ly~d~~~~v~~~~~~~Mvv~~Cg 108 (110)
T 2qcq_A 86 LFFDENKNVVLKVYPNMTVESCA 108 (110)
T ss_dssp EEECTTCCEEEEEEEEEEECCEE
T ss_pred EEEeCCCCEEEEEcCCcEEeecc
Confidence 99999999999999999999997
No 4
>2h62_A BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.17.1.2 PDB: 2goo_A* 1rew_A 3bmp_A 2qj9_B 1es7_A 2qja_A 2qjb_A 2h64_A 3bk3_A 1reu_A
Probab=100.00 E-value=3.7e-39 Score=251.88 Aligned_cols=101 Identities=40% Similarity=0.915 Sum_probs=96.7
Q ss_pred CCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC-CCCCCceeccccCceEEE
Q psy15092 125 FPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS-GTPGPCCVPETLTPLRVL 203 (225)
Q Consensus 125 ~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~-~~~~pCCvP~~~~~l~il 203 (225)
...|+|++|+|+|+||||++|||+|++|+|+||.|+|++++...+++||||++|++++..+ .++.|||+|++|++|+||
T Consensus 11 ~~~C~r~~l~VdF~dlGW~~WIiaP~gy~a~yC~G~C~~p~~~~~~~tnHaivq~l~~~~~~~~~~pCCvPt~l~~is~l 90 (114)
T 2h62_A 11 KSSCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVNSKIPKACCVPTELSAISML 90 (114)
T ss_dssp CCBSEEECCEEEHHHHTCTTTEEECSEEECCEEECBCCSSCCTTSEECHHHHHHHHHHHHCTTSCCCCEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEeeecCCcccEEcCCceEeEeeeeECCCCcccccCCchHHHHHHHHHhcCCCCCCCcccceeeccEEEE
Confidence 3569999999999999999999999999999999999999988899999999999999888 789999999999999999
Q ss_pred EEeCCCeEEEeEeCCeEEccCC
Q psy15092 204 YQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 204 y~~~~g~i~~~~~~nMiV~~Cg 225 (225)
|+|++++|++++|+||+|++||
T Consensus 91 y~d~~~~v~~~~~~~Mvv~~Cg 112 (114)
T 2h62_A 91 YLDENEKVVLKNYQDMVVEGCG 112 (114)
T ss_dssp EECTTSCEEEEEEEEEEEEEEE
T ss_pred EEeCCCCEEEEEcCCeEEeccc
Confidence 9999999999999999999997
No 5
>2r52_A BMP-6, bone morphogenetic protein 6; TGF-beta ligand, chondrogenesis, cleavage on PAIR of basic residues, cytokine, developmental protein; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=257.17 Aligned_cols=101 Identities=36% Similarity=0.854 Sum_probs=96.6
Q ss_pred CCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCceeccccCceEE
Q psy15092 125 FPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCCVPETLTPLRV 202 (225)
Q Consensus 125 ~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCCvP~~~~~l~i 202 (225)
...|+|++|+|+|+||||++|||+|++|+|+||.|.|++++...+++||||+||++++.++ .++.|||+|++|++|+|
T Consensus 39 ~~~C~r~~l~VdF~dlGW~dWIiaP~gy~A~yC~G~C~~pl~~~~~~tnHaivq~l~~~~~p~~~~~pCCvPt~l~~is~ 118 (143)
T 2r52_A 39 KTACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNATNHAIVQTLVHLMNPEYVPKPCCAPTKLNAISV 118 (143)
T ss_dssp CCBSEEECCEEETTTTTCGGGEEECSEEECCEEESBCCSSCCTTTTBCHHHHHHHHHHHTCTTTSCCCCEEEEEEEEEEE
T ss_pred CCCceEEEEEEEHhHCCCceeEEcCCceeeeeeeeECCCccccccCCCchHHHHHHHHhcCCCCCCCCCCcceeeccEEE
Confidence 3569999999999999999999999999999999999999988899999999999999888 68999999999999999
Q ss_pred EEEeCCCeEEEeEeCCeEEccCC
Q psy15092 203 LYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 203 ly~~~~g~i~~~~~~nMiV~~Cg 225 (225)
||+|++|+|++++|+||+|++||
T Consensus 119 Ly~d~~~~v~~k~~~~Mvv~~Cg 141 (143)
T 2r52_A 119 LYFDDNSNVILKKYRNMVVRACG 141 (143)
T ss_dssp EEECTTCCEEEEEEEEEEEEEEE
T ss_pred EEEECCCCEEEEEcCCeEEeecc
Confidence 99999999999999999999998
No 6
>1lxi_A Bone morphogenetic protein 7; cystine-knot growth factor, hormone-growth factor complex; HET: NAG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1lx5_A* 1bmp_A* 1m4u_L* 2qcw_A 2r53_A
Probab=100.00 E-value=2.5e-38 Score=254.97 Aligned_cols=101 Identities=36% Similarity=0.890 Sum_probs=96.1
Q ss_pred CCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCceeccccCceEE
Q psy15092 125 FPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCCVPETLTPLRV 202 (225)
Q Consensus 125 ~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCCvP~~~~~l~i 202 (225)
...|+|++|+|+|++|||++|||+|++|+|+||.|.|++++...+++||||++|++++.++ .++.|||+|++|++|+|
T Consensus 35 ~~~C~r~~l~VdF~dlGW~~WIiaP~gy~a~yC~G~C~~pl~~~~~~tnHaivq~l~~~~~p~~~~~pCCvPt~l~~is~ 114 (139)
T 1lxi_A 35 RQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFINPETVPKPCCAPTQLNAISV 114 (139)
T ss_dssp -CBSEEECCEEEHHHHTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTCCCCCEEEEEEEEEEE
T ss_pred CCcceeEEEEEEhhhCCCceeEECCCceeeeeeeeECCCCcccccCCCchHHHHHHHHhcCCCCCCCCCCcCeeeccEEE
Confidence 3569999999999999999999999999999999999999988899999999999999887 68999999999999999
Q ss_pred EEEeCCCeEEEeEeCCeEEccCC
Q psy15092 203 LYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 203 ly~~~~g~i~~~~~~nMiV~~Cg 225 (225)
||+|++++|++++|+||+|++||
T Consensus 115 ly~d~~~~v~~~~~~~Mvv~~Cg 137 (139)
T 1lxi_A 115 LYFDDSSNVILKKYRNMVVRACG 137 (139)
T ss_dssp EEECTTSCEEEEEEEEEEEEEEE
T ss_pred EEEeCCCCEEEEEcCCeEEEecc
Confidence 99999999999999999999997
No 7
>2arp_A Inhibin beta A chain; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1nyu_B 1nys_B 1s4y_B* 2arv_A* 2b0u_A 2p6a_A 3b4v_A*
Probab=100.00 E-value=1.1e-36 Score=238.51 Aligned_cols=104 Identities=34% Similarity=0.755 Sum_probs=85.9
Q ss_pred cCCCCCCCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC-------CCCCCc
Q psy15092 119 CSGKCSFPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS-------GTPGPC 191 (225)
Q Consensus 119 C~G~C~~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~-------~~~~pC 191 (225)
|.+. ...|+|++|+|+|+||||++|||+|++|+|+||.|+|++++.. .++|||+++|+++.+.. .+++||
T Consensus 4 c~~~--~~~C~r~~l~VdF~dlGW~~WIiaP~~y~a~yC~G~C~~p~~~-~~~tn~a~~~~~i~~~~~~~~~p~~~~~pC 80 (116)
T 2arp_A 4 CDGK--VNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAG-TSGSSLSFHSTVINHYRMRGHSPFANLKSC 80 (116)
T ss_dssp CCC----CCSEEECCEEEHHHHTCTTTEEECSEEECCEEESCCCC----------CCHHHHHHHHTTSTTCSSCCCCCCC
T ss_pred CCCC--CCCceeEEEEEEhhhcCCcccEECCCceEeEEEeeeCCCCccc-cCCcchHHHHHHHHhhhccccCCCCCCCCc
Confidence 5542 4579999999999999999999999999999999999999874 48899999998876532 467999
Q ss_pred eeccccCceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 192 CVPETLTPLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 192 CvP~~~~~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
|+|++|++|+|||+|+++++++++|+||+|++||
T Consensus 81 CvPt~l~~ls~ly~d~~~~v~~~~~~~Mvv~~Cg 114 (116)
T 2arp_A 81 CVPTKLRPMSMLYYDDGQNIIKKDIQNMIVEECG 114 (116)
T ss_dssp EEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEE
T ss_pred cccccCccEEEEEEeCCCCEEEEEcCCeEEeecc
Confidence 9999999999999999999999999999999997
No 8
>2tgi_A Transforming growth factor ,beta 2; 1.80A {Homo sapiens} SCOP: g.17.1.2 PDB: 1tfg_A 1tgj_A 1ktz_A 1tgk_A 2pjy_A 3eo1_C 1kla_A 1klc_A 1kld_A 3kfd_A
Probab=100.00 E-value=1.3e-35 Score=231.15 Aligned_cols=104 Identities=30% Similarity=0.710 Sum_probs=92.9
Q ss_pred ccccCCCCCCCCCCCCCeeeeec-CCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCce
Q psy15092 116 SYYCSGKCSFPIPKRKPLVVKFG-DLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCC 192 (225)
Q Consensus 116 A~~C~G~C~~~lc~R~~l~V~F~-dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCC 192 (225)
...|.+. ....|+|++|+|+|+ |||| +|||+|++|+|+||.|.|++++.. ++|||++|++++..+ .+++|||
T Consensus 4 ~~~C~~~-~~~~C~r~~l~VdF~~dlGW-~WIiaP~~y~A~yC~G~C~~p~~~---~tnHa~vq~l~~~~~p~~~~~pCC 78 (112)
T 2tgi_A 4 AAYCFRN-VQDNCCLRPLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWSS---DTQHSRVLSLYNTINPEASASPCC 78 (112)
T ss_dssp HHHHTTC-CCSBSEEECCEEEHHHHHCC-TTEEECSEEECCEEECBCCTTSSB---CSHHHHHHHHHHHHCGGGCCCCCE
T ss_pred cccccCC-CCCCceeEEEEEEhhhhcCC-ceEcCcCcEEEEEeeeECcCCccc---cchhhHHHHHHHhcCCCCCCCCce
Confidence 4457643 456799999999997 9999 799999999999999999998743 699999999998877 6899999
Q ss_pred eccccCceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 193 VPETLTPLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 193 vP~~~~~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
+|++|++|+|||+|++ ++++++|+||+|++||
T Consensus 79 vPt~l~~ls~ly~d~~-~~~~~~~~~Mvv~~Cg 110 (112)
T 2tgi_A 79 VSQDLEPLTILYYIGK-TPKIEQLSNMIVKSCK 110 (112)
T ss_dssp EECSEEEEEEEEEETT-EEEEEEEEEEEECCEE
T ss_pred eceeeccEEEEEEeCC-ceEEEEcCCcEEeecc
Confidence 9999999999999975 6889999999999997
No 9
>3hh2_A Growth/differentiation factor 8; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Mus musculus} SCOP: g.17.1.0 PDB: 3sek_B*
Probab=100.00 E-value=1.3e-34 Score=224.51 Aligned_cols=103 Identities=32% Similarity=0.762 Sum_probs=89.8
Q ss_pred ccccCCCCCCCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCcee
Q psy15092 116 SYYCSGKCSFPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCCV 193 (225)
Q Consensus 116 A~~C~G~C~~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCCv 193 (225)
+..|.+.-....|+|++|+|+|+|||| ||||+|++|+|+||.|.|++++. +.++|+.+ ++.++ .+++|||+
T Consensus 3 ~~~C~~~~~~~~C~r~~l~V~F~dlGW-dWIiaP~~y~a~yC~G~C~~p~~---~~~~h~~l---~~~~~p~~~~~pCCv 75 (109)
T 3hh2_A 3 GLDCDEHSTESRCCRYPLTVDFEAFGW-DWIIAPKRYKANYCSGECEFVFL---QKYPHTHL---VHQANPRGSAGPCCT 75 (109)
T ss_dssp SCBCCTTCCCCBSEEECCEEEHHHHTC-TTEEECSEEECCEEECBCCTTTT---CCCHHHHH---HHHHCCTTCCCCCEE
T ss_pred cccCCCCCCCCCcEEEEEEEeHHHcCC-CeEeCCCcccceeecccCCCccc---ccCchhhh---hhhcCcccCCCceEe
Confidence 345777655578999999999999999 79999999999999999999863 34678753 44444 68999999
Q ss_pred ccccCceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 194 PETLTPLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 194 P~~~~~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
|++|++|+|||+|++|+|++++|+||+|++||
T Consensus 76 Pt~l~~ls~ly~d~~~~v~~~~~~~Mvv~~Cg 107 (109)
T 3hh2_A 76 PTKMSPINMLYFNGKEQIIYGKIPAMVVDRCG 107 (109)
T ss_dssp EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEE
T ss_pred eeeeccEEEEEEeCCCCEEEEEcCCeEEeeeE
Confidence 99999999999999999999999999999997
No 10
>3rjr_A Transforming growth factor beta-1; TGF beta, activation, integrin, cytokine; HET: NAG; 3.05A {Sus scrofa}
Probab=99.97 E-value=7.7e-32 Score=246.91 Aligned_cols=129 Identities=22% Similarity=0.524 Sum_probs=101.6
Q ss_pred eeeCeEEEecccCC--cc-c-eeCCCCccccccCCCCCCCCCCCCCeeeeec-CCCccceEeccCccccccccccCCCCC
Q psy15092 91 ERKPLVVKFGDLGW--DQ-W-IIEPQSFQSYYCSGKCSFPIPKRKPLVVKFG-DLGWDQWIIEPQSFQSYYCSGKCSFPI 165 (225)
Q Consensus 91 ~r~~l~V~F~dlGw--~~-W-Ii~P~~~~A~~C~G~C~~~lc~R~~l~V~F~-dlGW~dWIiaP~~y~a~yC~G~C~~~~ 165 (225)
..+||+|.|.+.+- +. . ....++....+|.+. ....|||++|+|+|+ |||| +|||+|+||+|+||.|.|++++
T Consensus 226 ~~~PfLv~~~~~~~~~~~~~~~r~kr~~~~~~c~~~-~~~~Ccr~~~~VdF~~dlGW-~WIiaP~gy~a~yC~G~C~~~~ 303 (363)
T 3rjr_A 226 MNRPFLLLMATPLERAQHLHSSRHRRALDTNYCFSS-TEKNCCVRQLYIDFRKDLGW-KWIHEPKGYHANFCLGPCPYIW 303 (363)
T ss_dssp SSCSEEEEEECCHHHHHC--------CBCTTTTTTS-CCCSSEEECCEEEHHHHHCC-CSEEECSEEECCEEESCCCCTT
T ss_pred cCCcEEEEEecccccccccccccccccccccccccc-ccCCccccceEEEeecccCc-ceecCCCcccceEeeeeCCCCc
Confidence 56788888875321 00 0 011111222346542 345799999999995 9999 7999999999999999999986
Q ss_pred CCCCCCCchHHHHHHHHhcC--CCCCCceeccccCceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 166 PKALAPSSHAYLQSAMYLVS--GTPGPCCVPETLTPLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 166 ~~~~~~tnha~iqsll~~~~--~~~~pCCvP~~~~~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
. ++||||+||++++.++ .+++|||+|++|++|+|||++++++ ++++|+||+|++||
T Consensus 304 ~---~~t~ha~v~~l~~~~~p~~~~~pCCvPt~l~~ls~ly~~~~~~-~~~~~~~Mvv~~Cg 361 (363)
T 3rjr_A 304 S---LDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKP-KVEQLSNMIVRSCK 361 (363)
T ss_dssp T---SCSCCHHHHHHTSSCCSSSSSSCCEEECSEEEEEEEEEETTEE-EEEEEEEEEECCEE
T ss_pred c---CCCchHHHHHHHHhcCCCcCCCCccccccccceEEEEEeCCee-EEEEcCCcEEEecc
Confidence 4 5799999999999887 6899999999999999999998665 56999999999997
No 11
>2ask_A Artemin; glial cell derived family ligand, neurotrphoic growth factor, sulfates, hormone/growth factor complex; 1.55A {Homo sapiens} PDB: 2gyz_A 2gyr_A 2gh0_C*
Probab=99.94 E-value=4.2e-28 Score=188.76 Aligned_cols=89 Identities=19% Similarity=0.353 Sum_probs=78.2
Q ss_pred CCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHH-HHHHHhc--------CCCCCCceecc
Q psy15092 125 FPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYL-QSAMYLV--------SGTPGPCCVPE 195 (225)
Q Consensus 125 ~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~i-qsll~~~--------~~~~~pCCvP~ 195 (225)
...|++++|+|+|+|||| +| ++|++|+|+||+|+|+++ +|||+++ +++++.. ..+++|||+|+
T Consensus 13 ~~~C~l~~l~V~f~dLGw-~~-~ap~~y~a~yC~G~C~~~------~tnHa~vl~~l~~~~~~~~p~~~~~~~~PCCvPt 84 (113)
T 2ask_A 13 ARGCRLRSQLVPVRALGL-GH-RSDELVRFRFCSGSCRRA------RSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPT 84 (113)
T ss_dssp CCBSEEEEEEEEGGGGSS-SC-CCCCEEEEEEEECBCGGG------CCHHHHHHHHHHHHTCSCCCSSSCCCSSCEEEEE
T ss_pred CCCceeEEEEEEHHHcCC-Cc-cCcCeeeeeeeeeeCCCC------CCcHHHHHHHHHHhccccCcccCCCCCCCCccCc
Confidence 346999999999999999 77 469999999999999983 6899987 8888865 25789999999
Q ss_pred ccCceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 196 TLTPLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 196 ~~~~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
+|++|+|| | +++++++|+||+|++||
T Consensus 85 ~~~~iS~L--d--~~v~~k~~~~Mva~~Cg 110 (113)
T 2ask_A 85 RYEAVSFM--D--VNSTWRTVDRLSATACG 110 (113)
T ss_dssp EEEEEEEE--C--TTSCEEEEEEEEEEEEE
T ss_pred eecceEEE--c--CceeeeecCCcEEeecc
Confidence 99999998 3 46899999999999997
No 12
>1agq_A GDNF, glial cell-derived neurotrophic factor; growth factor, cystine knot; 1.90A {Rattus norvegicus} SCOP: g.17.1.2 PDB: 3fub_B* 2v5e_B*
Probab=99.92 E-value=1.2e-26 Score=184.96 Aligned_cols=89 Identities=19% Similarity=0.342 Sum_probs=75.3
Q ss_pred CCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHH-HHHHHh--cC--CCCCCceeccccC-
Q psy15092 125 FPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYL-QSAMYL--VS--GTPGPCCVPETLT- 198 (225)
Q Consensus 125 ~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~i-qsll~~--~~--~~~~pCCvP~~~~- 198 (225)
...|++++|+|+|+|||| .| ++|.+|+|+||+|+|++ ++|||++| ++|++. ++ .+++|||+|++|+
T Consensus 39 ~~~C~l~~L~V~f~dLGw-g~-~spe~y~a~yC~G~C~~------~~TNHAivL~~L~~~~~l~p~~vp~PCCvPt~~s~ 110 (135)
T 1agq_A 39 NRGCVLTAIHLNVTDLGL-GY-ETKEELIFRYCSGSCEA------AETMYDKILKNLSRSRRLTSDKVGQACCRPVAFDD 110 (135)
T ss_dssp CTTSEEEEEEEEGGGGCS-SC-CCCCEEEEEEEESCCCS------CCSHHHHHHHHHHHHC------CCCCCEEEEEECC
T ss_pred CCCceeEEEEEEHHHhCC-Cc-cCcCeeEeeeeeeeCCC------CCccHHHHHHHHHhhcccCCCCCCCCCccCeecCC
Confidence 356888999999999999 55 68999999999999998 37999998 777763 23 7899999999998
Q ss_pred ceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 199 PLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 199 ~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
+|+|| | +++++++|+||+|++||
T Consensus 111 ~IS~L--D--~~~v~k~~~~Mva~~CG 133 (135)
T 1agq_A 111 DLSFL--D--DSLVYHILRKHSAKRCG 133 (135)
T ss_dssp CEEEE--C--TTSCEEEECSCSEEEEE
T ss_pred CceEE--c--CCcceeecCcceeeccc
Confidence 99999 3 45689999999999998
No 13
>1zkz_A Growth/differentiation factor 2; glycoprotein, growth factor, cytokine, hormone-growth factor; 2.33A {Homo sapiens}
Probab=99.46 E-value=1.5e-14 Score=111.74 Aligned_cols=46 Identities=39% Similarity=1.068 Sum_probs=41.7
Q ss_pred cCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCCCCC
Q psy15092 87 RQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKRKP 132 (225)
Q Consensus 87 ~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~R~~ 132 (225)
...|+|++|+|+|+|+||++|||+|++|+|+||.|.|++++-...+
T Consensus 5 ~~~C~r~~l~VdF~dlGW~~WIiaP~gy~a~yC~G~C~~~~~~~~~ 50 (110)
T 1zkz_A 5 GSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLADDVT 50 (110)
T ss_dssp CCBSEEEEEEEETTTTTCTTTEEECSEEEEEEEESBCCSSCCTTSC
T ss_pred CCCcEEEEEEEEeeccCCcceEECCCceEeEEeEeECCCCcccccC
Confidence 4579999999999999999999999999999999999998765444
No 14
>2arp_A Inhibin beta A chain; cystine knot, disulfide rich, EGF domain, kazal domain, PROT complex, hormone-growth factor complex; HET: 1PG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1nyu_B 1nys_B 1s4y_B* 2arv_A* 2b0u_A 2p6a_A 3b4v_A*
Probab=99.45 E-value=1.2e-14 Score=113.21 Aligned_cols=43 Identities=37% Similarity=1.008 Sum_probs=37.1
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIP 128 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc 128 (225)
....|+|++|+|+|+|+||++|||+|++|+|+||.|.|++++-
T Consensus 7 ~~~~C~r~~l~VdF~dlGW~~WIiaP~~y~a~yC~G~C~~p~~ 49 (116)
T 2arp_A 7 KVNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIA 49 (116)
T ss_dssp --CCSEEECCEEEHHHHTCTTTEEECSEEECCEEESCCCC---
T ss_pred CCCCceeEEEEEEhhhcCCcccEECCCceEeEEEeeeCCCCcc
Confidence 4467999999999999999999999999999999999998876
No 15
>2qcq_A Bone morphogenetic protein 3; BMP, TGF-beta, signaling protein; 2.21A {Homo sapiens}
Probab=99.44 E-value=2.1e-14 Score=110.89 Aligned_cols=43 Identities=56% Similarity=1.388 Sum_probs=39.5
Q ss_pred cCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCC
Q psy15092 87 RQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPK 129 (225)
Q Consensus 87 ~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~ 129 (225)
...|+|++|+|+|+|+||++|||+|++|+|+||.|.|++++..
T Consensus 5 ~~~C~r~~l~VdF~dlGW~~WIiaP~~y~a~yC~G~C~~pl~~ 47 (110)
T 2qcq_A 5 PRNCARRYLKVDFADIGWSEWIISPKSFDAYYCSGACQFPMPK 47 (110)
T ss_dssp CSBSEEECCEEETTTTTCTTTEEECSEEECCEEECBCCSSCCG
T ss_pred CCCcEEEEEEEEeeccCCcceEECCCceEeEEeEeECCCCccc
Confidence 3469999999999999999999999999999999999987653
No 16
>2h62_A BMP-2, BMP-2A, bone morphogenetic protein 2; TGF-beta superfamily, ligand-receptor complex, hormone/growth factor complex; 1.85A {Homo sapiens} SCOP: g.17.1.2 PDB: 2goo_A* 1rew_A 3bmp_A 2qj9_B 1es7_A 2qja_A 2qjb_A 2h64_A 3bk3_A 1reu_A
Probab=99.43 E-value=2e-14 Score=111.72 Aligned_cols=46 Identities=41% Similarity=1.232 Sum_probs=41.0
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKRK 131 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~R~ 131 (225)
....|+|++|+|+|+|+||++|||+|++|+|+||.|.|++++....
T Consensus 10 ~~~~C~r~~l~VdF~dlGW~~WIiaP~gy~a~yC~G~C~~p~~~~~ 55 (114)
T 2h62_A 10 LKSSCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHL 55 (114)
T ss_dssp -CCBSEEECCEEEHHHHTCTTTEEECSEEECCEEECBCCSSCCTTS
T ss_pred CCCCceeEEEEEEeeecCCcccEEcCCceEeEeeeeECCCCccccc
Confidence 3457999999999999999999999999999999999999876443
No 17
>3evs_B Growth/differentiation factor 5; ligand-receptor complex, cystin-knot ligand, three-finger to (receptor); 2.10A {Homo sapiens} SCOP: g.17.1.0 PDB: 1waq_A 3qb4_A 2bhk_A
Probab=99.43 E-value=2.5e-14 Score=111.69 Aligned_cols=44 Identities=43% Similarity=1.134 Sum_probs=39.5
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPK 129 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~ 129 (225)
....|+|++|+|+|.|+||++|||+|++|+|+||.|.|++++-.
T Consensus 12 ~~~~C~r~~l~V~F~dlGW~~WIiaP~gy~a~yC~G~C~~p~~~ 55 (117)
T 3evs_B 12 LKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRS 55 (117)
T ss_dssp --CBSEEECCEEETGGGTGGGTEEECSEEECCEEESBCCSSCCG
T ss_pred CCCCcEEEEEEEEHHHCCCcceeeCCCcccceeeeeECCCCccc
Confidence 34579999999999999999999999999999999999987654
No 18
>2r52_A BMP-6, bone morphogenetic protein 6; TGF-beta ligand, chondrogenesis, cleavage on PAIR of basic residues, cytokine, developmental protein; 2.50A {Homo sapiens}
Probab=99.43 E-value=4e-14 Score=114.17 Aligned_cols=48 Identities=40% Similarity=1.047 Sum_probs=42.1
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCCCCCe
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKRKPL 133 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~R~~l 133 (225)
....|+|++|+|+|.|+||++|||+|++|+|+||.|.|++++-...+.
T Consensus 38 ~~~~C~r~~l~VdF~dlGW~dWIiaP~gy~A~yC~G~C~~pl~~~~~~ 85 (143)
T 2r52_A 38 LKTACRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFPLNAHMNA 85 (143)
T ss_dssp -CCBSEEECCEEETTTTTCGGGEEECSEEECCEEESBCCSSCCTTTTB
T ss_pred CCCCceEEEEEEEHhHCCCceeEEcCCceeeeeeeeECCCccccccCC
Confidence 456799999999999999999999999999999999999987654443
No 19
>1lxi_A Bone morphogenetic protein 7; cystine-knot growth factor, hormone-growth factor complex; HET: NAG; 2.00A {Homo sapiens} SCOP: g.17.1.2 PDB: 1lx5_A* 1bmp_A* 1m4u_L* 2qcw_A 2r53_A
Probab=99.40 E-value=3.1e-14 Score=114.30 Aligned_cols=47 Identities=45% Similarity=1.176 Sum_probs=40.9
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKRKP 132 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~R~~ 132 (225)
....|+|++|+|+|.|+||++|||+|++|+|+||.|.|++++-...+
T Consensus 34 ~~~~C~r~~l~VdF~dlGW~~WIiaP~gy~a~yC~G~C~~pl~~~~~ 80 (139)
T 1lxi_A 34 QRQACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMN 80 (139)
T ss_dssp --CBSEEECCEEEHHHHTCTTTEEECSEEECCEEESBCCSSCCGGGC
T ss_pred CCCcceeEEEEEEhhhCCCceeEECCCceeeeeeeeECCCCcccccC
Confidence 34679999999999999999999999999999999999998764433
No 20
>3hh2_A Growth/differentiation factor 8; protein-protein complex, TB domain, cystine knot motif, TGF- fold, disulfide linked dimer, CLE PAIR of basic residues, cytokine; HET: CIT; 2.15A {Mus musculus} SCOP: g.17.1.0 PDB: 3sek_B*
Probab=99.38 E-value=6.5e-14 Score=108.03 Aligned_cols=41 Identities=44% Similarity=1.128 Sum_probs=37.9
Q ss_pred cCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCC
Q psy15092 87 RQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIP 128 (225)
Q Consensus 87 ~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc 128 (225)
...|+|++|+|+|+|+|| +|||+|++|+|+||.|.|++++-
T Consensus 12 ~~~C~r~~l~V~F~dlGW-dWIiaP~~y~a~yC~G~C~~p~~ 52 (109)
T 3hh2_A 12 ESRCCRYPLTVDFEAFGW-DWIIAPKRYKANYCSGECEFVFL 52 (109)
T ss_dssp CCBSEEECCEEEHHHHTC-TTEEECSEEECCEEECBCCTTTT
T ss_pred CCCcEEEEEEEeHHHcCC-CeEeCCCcccceeecccCCCccc
Confidence 457999999999999999 59999999999999999998764
No 21
>2tgi_A Transforming growth factor ,beta 2; 1.80A {Homo sapiens} SCOP: g.17.1.2 PDB: 1tfg_A 1tgj_A 1ktz_A 1tgk_A 2pjy_A 3eo1_C 1kla_A 1klc_A 1kld_A 3kfd_A
Probab=99.34 E-value=1.6e-13 Score=106.34 Aligned_cols=43 Identities=35% Similarity=1.039 Sum_probs=38.7
Q ss_pred ccCCeeeeCeEEEec-ccCCccceeCCCCccccccCCCCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFG-DLGWDQWIIEPQSFQSYYCSGKCSFPIPK 129 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~-dlGw~~WIi~P~~~~A~~C~G~C~~~lc~ 129 (225)
....|+|++|+|+|+ |+|| +|||+|++|+|+||.|.|++++-.
T Consensus 11 ~~~~C~r~~l~VdF~~dlGW-~WIiaP~~y~A~yC~G~C~~p~~~ 54 (112)
T 2tgi_A 11 VQDNCCLRPLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWSS 54 (112)
T ss_dssp CCSBSEEECCEEEHHHHHCC-TTEEECSEEECCEEECBCCTTSSB
T ss_pred CCCCceeEEEEEEhhhhcCC-ceEcCcCcEEEEEeeeECcCCccc
Confidence 456799999999998 9999 599999999999999999987653
No 22
>3rjr_A Transforming growth factor beta-1; TGF beta, activation, integrin, cytokine; HET: NAG; 3.05A {Sus scrofa}
Probab=99.06 E-value=2.4e-11 Score=111.13 Aligned_cols=41 Identities=34% Similarity=1.006 Sum_probs=37.4
Q ss_pred cCCeeeeCeEEEec-ccCCccceeCCCCccccccCCCCCCCCC
Q psy15092 87 RQSCERKPLVVKFG-DLGWDQWIIEPQSFQSYYCSGKCSFPIP 128 (225)
Q Consensus 87 ~~~C~r~~l~V~F~-dlGw~~WIi~P~~~~A~~C~G~C~~~lc 128 (225)
...|+|++|+|+|. |+|| +|||+|+||+|+||.|.|++++-
T Consensus 263 ~~~Ccr~~~~VdF~~dlGW-~WIiaP~gy~a~yC~G~C~~~~~ 304 (363)
T 3rjr_A 263 EKNCCVRQLYIDFRKDLGW-KWIHEPKGYHANFCLGPCPYIWS 304 (363)
T ss_dssp CCSSEEECCEEEHHHHHCC-CSEEECSEEECCEEESCCCCTTT
T ss_pred cCCccccceEEEeecccCc-ceecCCCcccceEeeeeCCCCcc
Confidence 35799999999996 9999 69999999999999999998764
No 23
>2ask_A Artemin; glial cell derived family ligand, neurotrphoic growth factor, sulfates, hormone/growth factor complex; 1.55A {Homo sapiens} PDB: 2gyz_A 2gyr_A 2gh0_C*
Probab=98.46 E-value=3.3e-08 Score=76.50 Aligned_cols=39 Identities=21% Similarity=0.455 Sum_probs=33.8
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFP 126 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~ 126 (225)
....|++++|+|+|+|+||+ |+ +|+.|.|+||+|.|+++
T Consensus 12 ~~~~C~l~~l~V~f~dLGw~-~~-ap~~y~a~yC~G~C~~~ 50 (113)
T 2ask_A 12 GARGCRLRSQLVPVRALGLG-HR-SDELVRFRFCSGSCRRA 50 (113)
T ss_dssp -CCBSEEEEEEEEGGGGSSS-CC-CCCEEEEEEEECBCGGG
T ss_pred CCCCceeEEEEEEHHHcCCC-cc-CcCeeeeeeeeeeCCCC
Confidence 34579999999999999997 54 59999999999999884
No 24
>1agq_A GDNF, glial cell-derived neurotrophic factor; growth factor, cystine knot; 1.90A {Rattus norvegicus} SCOP: g.17.1.2 PDB: 3fub_B* 2v5e_B*
Probab=98.30 E-value=1.9e-07 Score=74.24 Aligned_cols=39 Identities=23% Similarity=0.491 Sum_probs=34.3
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFP 126 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~ 126 (225)
....|++++|+|+|.|+||+. ++|.+|.|+||+|.|+++
T Consensus 38 ~~~~C~l~~L~V~f~dLGwg~--~spe~y~a~yC~G~C~~~ 76 (135)
T 1agq_A 38 KNRGCVLTAIHLNVTDLGLGY--ETKEELIFRYCSGSCEAA 76 (135)
T ss_dssp -CTTSEEEEEEEEGGGGCSSC--CCCCEEEEEEEESCCCSC
T ss_pred CCCCceeEEEEEEHHHhCCCc--cCcCeeEeeeeeeeCCCC
Confidence 456799999999999999974 579999999999999884
No 25
>2k8p_A Sclerostin; WNT signalling pathway, bone formation, alternative splicing, glycoprotein, secreted, signaling protein; NMR {Homo sapiens} PDB: 2kd3_A
Probab=73.09 E-value=4.9 Score=33.00 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=29.1
Q ss_pred CCCceeccccCceEEEEEeCCCeE-EEeEeCCeEEccCC
Q psy15092 188 PGPCCVPETLTPLRVLYQESPYIT-VLRYFQDMRVESCG 225 (225)
Q Consensus 188 ~~pCCvP~~~~~l~ily~~~~g~i-~~~~~~nMiV~~Cg 225 (225)
..-||+|.++.-..|-..=.||+. ....+ -+|.+|+
T Consensus 106 ~~~cCvp~rsRrrRIqm~C~DGtt~rt~ki--~vV~sCk 142 (189)
T 2k8p_A 106 PDFRCIPDRYRAQRVQLLCPGGEAPRARKV--RLVASCK 142 (189)
T ss_dssp CCCCCEECCEEEEEEEEECCTTSCCEEEEE--EEECCEE
T ss_pred CcccccCCceeeEEEEEEcCCCCeeeEEEE--EEEEeec
Confidence 468999999999999888888987 66666 6777774
Done!