Query psy15092
Match_columns 225
No_of_seqs 197 out of 904
Neff 6.2
Searched_HMMs 13730
Date Fri Aug 16 20:22:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15092.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15092hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lxia_ g.17.1.2 (A:) Bone mor 100.0 6.9E-39 5E-43 244.8 5.0 99 127-225 2-102 (104)
2 d2h62a1 g.17.1.2 (A:12-114) Bo 100.0 1.6E-38 1.1E-42 242.4 4.8 99 127-225 2-101 (103)
3 d2arpa1 g.17.1.2 (A:1-116) Act 100.0 5.6E-35 4.1E-39 226.9 5.2 106 118-225 3-114 (116)
4 d2tgia_ g.17.1.2 (A:) TGF-beta 100.0 2.4E-34 1.8E-38 222.1 4.6 105 116-225 4-110 (112)
5 d1agqa_ g.17.1.2 (A:) Glial ce 99.9 2.8E-29 2.1E-33 188.9 3.7 88 127-225 3-95 (97)
6 d2arpa1 g.17.1.2 (A:1-116) Act 99.4 1.1E-14 7.8E-19 111.7 1.0 47 86-132 7-53 (116)
7 d1lxia_ g.17.1.2 (A:) Bone mor 99.4 1.1E-14 8.2E-19 109.6 1.0 45 89-133 2-46 (104)
8 d2h62a1 g.17.1.2 (A:12-114) Bo 99.4 1.6E-14 1.2E-18 108.6 1.6 45 89-133 2-46 (103)
9 d2tgia_ g.17.1.2 (A:) TGF-beta 99.2 7.5E-13 5.5E-17 100.7 0.9 42 87-128 12-53 (112)
10 d1agqa_ g.17.1.2 (A:) Glial ce 98.7 1.3E-09 9.1E-14 80.4 2.1 37 88-126 2-38 (97)
11 d2uuyb1 g.8.1.3 (B:24-74) Tryp 37.9 3.9 0.00029 24.3 0.4 25 139-163 4-30 (51)
12 d1axha_ g.3.6.2 (A:) Atracotox 28.7 5.5 0.0004 22.5 -0.0 17 149-165 10-26 (37)
No 1
>d1lxia_ g.17.1.2 (A:) Bone morphogenetic protein-7 (BMP-7) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=6.9e-39 Score=244.78 Aligned_cols=99 Identities=36% Similarity=0.919 Sum_probs=95.5
Q ss_pred CCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCceeccccCceEEEE
Q psy15092 127 IPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCCVPETLTPLRVLY 204 (225)
Q Consensus 127 lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCCvP~~~~~l~ily 204 (225)
.|+|++|+|+|+||||++|||+|++|+|+||.|.|++++...++++|||++|++++..+ .+++|||+|++|++|+|||
T Consensus 2 ~C~r~~~~V~F~~lGW~~WIi~P~~y~a~~C~G~C~~p~~~~~~~~~ha~i~~~~~~~~~~~~~~pCC~Pt~~~~lsily 81 (104)
T d1lxia_ 2 ACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNATNHAIVQTLVHFINPETVPKPCCAPTQLNAISVLY 81 (104)
T ss_dssp BSEEECCEEEHHHHTCTTTEEECSEEECCEEESBCCSSCCGGGCCCHHHHHHHHHHHHCTTTCCCCCEEEEEEEEEEEEE
T ss_pred CceeeeeEEEeeecCCcceEEccCccccEECcCCCCCcccccCCCCchhhhhhhhhhcCCCCCCCCccccccccCEEEEE
Confidence 48999999999999998899999999999999999999988899999999999999888 7899999999999999999
Q ss_pred EeCCCeEEEeEeCCeEEccCC
Q psy15092 205 QESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 205 ~~~~g~i~~~~~~nMiV~~Cg 225 (225)
+|++|++++++|+||+|++||
T Consensus 82 ~d~~~~i~~~~~~~Mvv~~Cg 102 (104)
T d1lxia_ 82 FDDSSNVILKKYRNMVVRACG 102 (104)
T ss_dssp ECTTSCEEEEEEEEEEEEEEE
T ss_pred EeCCCcEEEEEcCCcEEEeee
Confidence 999999999999999999997
No 2
>d2h62a1 g.17.1.2 (A:12-114) Bone morphogenetic protein-2 (BMP-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.6e-38 Score=242.38 Aligned_cols=99 Identities=40% Similarity=0.943 Sum_probs=95.5
Q ss_pred CCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC-CCCCCceeccccCceEEEEE
Q psy15092 127 IPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS-GTPGPCCVPETLTPLRVLYQ 205 (225)
Q Consensus 127 lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~-~~~~pCCvP~~~~~l~ily~ 205 (225)
-|+|++|+|+|+||||++|||+|++|+|+||.|.|++++...++++|||+||++++..+ .+++|||+|++|++|+|||+
T Consensus 2 ~C~r~~l~VdF~~lGW~~wIi~P~~y~a~~C~G~C~~~~~~~~~~t~ha~i~~l~~~~~~~~~~~CC~Pt~~~~l~~ly~ 81 (103)
T d2h62a1 2 SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVNSKIPKACCVPTELSAISMLYL 81 (103)
T ss_dssp BSEEECCEEEHHHHTCTTTEEECSEEECCEEECBCCSSCCTTSEECHHHHHHHHHHHHCTTSCCCCEEEEEEEEEEEEEE
T ss_pred CceEEEEEEEhhccCCcceEEcCCccccceecccCCcccccccCCccHHHHHHHHhhcCCCCCCCCcccceeeCEEEEEE
Confidence 48999999999999998899999999999999999999988899999999999999888 88999999999999999999
Q ss_pred eCCCeEEEeEeCCeEEccCC
Q psy15092 206 ESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 206 ~~~g~i~~~~~~nMiV~~Cg 225 (225)
|++++|+++++|||+|++||
T Consensus 82 d~~~~i~~~~~~nMvv~~Cg 101 (103)
T d2h62a1 82 DENEKVVLKNYQDMVVEGCG 101 (103)
T ss_dssp CTTSCEEEEEEEEEEEEEEE
T ss_pred eCCCCEEEEECCCcEeeccc
Confidence 99999999999999999997
No 3
>d2arpa1 g.17.1.2 (A:1-116) Activin A (Inhibin beta A) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.6e-35 Score=226.88 Aligned_cols=106 Identities=33% Similarity=0.719 Sum_probs=84.8
Q ss_pred ccCCCCCCCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCC--CCchHHHHHHHHhcC----CCCCCc
Q psy15092 118 YCSGKCSFPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALA--PSSHAYLQSAMYLVS----GTPGPC 191 (225)
Q Consensus 118 ~C~G~C~~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~--~tnha~iqsll~~~~----~~~~pC 191 (225)
.|.+. ...|+|++|+|+|++|||++|||+|++|+|+||.|.|++++...++ .++|+.++..+.... .+++||
T Consensus 3 ~c~~~--~~~Ccr~~~~VdF~~lgW~~WIiaP~~y~a~~C~G~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pC 80 (116)
T d2arpa1 3 ECDGK--VNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSGSSLSFHSTVINHYRMRGHSPFANLKSC 80 (116)
T ss_dssp SCCC----CCSEEECCEEEHHHHTCTTTEEECSEEECCEEESCCCC---------CCHHHHHHHHTTSTTCSSCCCCCCC
T ss_pred CCCCC--CCceEEEEEEEEeeecCCcceEECCCccccceecccCCCcccccCCccHHHHHHHHHHHhhhccCCCCCCCCC
Confidence 36553 4679999999999999998899999999999999999998755433 344666655544332 578999
Q ss_pred eeccccCceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 192 CVPETLTPLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 192 CvP~~~~~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
|+|++|++|+|||++++++|++++|+||+|++||
T Consensus 81 CvP~~~~~l~ily~d~~~~i~~~~~~nMvv~~Cg 114 (116)
T d2arpa1 81 CVPTKLRPMSMLYYDDGQNIIKKDIQNMIVEECG 114 (116)
T ss_dssp EEEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEE
T ss_pred cccceecCEEEEEEeCCCeEEEEECCCcEEeccC
Confidence 9999999999999999999999999999999997
No 4
>d2tgia_ g.17.1.2 (A:) TGF-beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.4e-34 Score=222.06 Aligned_cols=105 Identities=26% Similarity=0.555 Sum_probs=90.9
Q ss_pred ccccCCCCCCCCCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC--CCCCCcee
Q psy15092 116 SYYCSGKCSFPIPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS--GTPGPCCV 193 (225)
Q Consensus 116 A~~C~G~C~~~lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~--~~~~pCCv 193 (225)
+++|.+.- ...|+|++|+|+|+++||.+|||+|++|+|+||.|.|++++. +.+||+++|++++..+ .+++|||+
T Consensus 4 ~~~c~~~~-~~~Ccr~~~~V~F~~~~~~~WIi~P~~y~a~yC~G~C~~~~~---~~tnha~i~~~~~~~~~~~~~~pCCv 79 (112)
T d2tgia_ 4 AAYCFRNV-QDNCCLRPLYIDFKRDLGWKWIHEPKGYNANFCAGACPYLWS---SDTQHSRVLSLYNTINPEASASPCCV 79 (112)
T ss_dssp HHHHTTCC-CSBSEEECCEEEHHHHHCCTTEEECSEEECCEEECBCCTTSS---BCSHHHHHHHHHHHHCGGGCCCCCEE
T ss_pred cccccCCC-CCCceEEEEEEEEEecCCccceecCCceEeEEecCCCcCCcc---CCCcchhhhhhhhccCCCCCCCCCEe
Confidence 45565542 346999999999987555489999999999999999999863 5589999999999888 78999999
Q ss_pred ccccCceEEEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 194 PETLTPLRVLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 194 P~~~~~l~ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
|++|++|+|||+++++ +++++|+||+|++||
T Consensus 80 P~~~~~lsily~~~~~-~~~~~~~~Mvv~~Cg 110 (112)
T d2tgia_ 80 SQDLEPLTILYYIGKT-PKIEQLSNMIVKSCK 110 (112)
T ss_dssp ECSEEEEEEEEEETTE-EEEEEEEEEEECCEE
T ss_pred eeeecCEEEEEEECCE-EEEEEcCCeEEeeee
Confidence 9999999999999866 566899999999997
No 5
>d1agqa_ g.17.1.2 (A:) Glial cell-derived neurotrophic factor, GDNF {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.95 E-value=2.8e-29 Score=188.85 Aligned_cols=88 Identities=17% Similarity=0.341 Sum_probs=76.4
Q ss_pred CCCCCCeeeeecCCCccceEeccCccccccccccCCCCCCCCCCCCchHHHHHHHHhcC-----CCCCCceeccccCceE
Q psy15092 127 IPKRKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKALAPSSHAYLQSAMYLVS-----GTPGPCCVPETLTPLR 201 (225)
Q Consensus 127 lc~R~~l~V~F~dlGW~dWIiaP~~y~a~yC~G~C~~~~~~~~~~tnha~iqsll~~~~-----~~~~pCCvP~~~~~l~ 201 (225)
.|+++.|+|+|+|||| +| |+|++|+|+||.|+|+. +++||+.+++++.+.+ .+++|||+|++|++ .
T Consensus 3 ~C~~~~~~v~f~elGw-~~-~~p~~~~~~YC~G~C~~------~~t~ha~i~~~l~~~~~~~~~~~~~PCCvPtk~~~-~ 73 (97)
T d1agqa_ 3 GCVLTAIHLNVTDLGL-GY-ETKEELIFRYCSGSCEA------AETMYDKILKNLSRSRRLTSDKVGQACCRPVAFDD-D 73 (97)
T ss_dssp TSEEEEEEEEGGGGCS-SC-CCCCEEEEEEEESCCCS------CCSHHHHHHHHHHHHC------CCCCCEEEEEECC-C
T ss_pred cceeeEEEEEHHHcCC-ce-ecCCeeeeeeeccCCCC------CCccHHHHHHHHHHhcccCCCCCCCCceecccccc-e
Confidence 4899999999999999 56 69999999999999976 4589999998886543 67899999999999 6
Q ss_pred EEEEeCCCeEEEeEeCCeEEccCC
Q psy15092 202 VLYQESPYITVLRYFQDMRVESCG 225 (225)
Q Consensus 202 ily~~~~g~i~~~~~~nMiV~~Cg 225 (225)
|+|+|+ +++++++|||+|++||
T Consensus 74 ~l~~d~--~i~~~~~~~Mvv~~Cg 95 (97)
T d1agqa_ 74 LSFLDD--SLVYHILRKHSAKRCG 95 (97)
T ss_dssp EEEECT--TSCEEEECSCSEEEEE
T ss_pred EEEEcC--CEEEEEcCCcEeeccc
Confidence 888874 4678899999999997
No 6
>d2arpa1 g.17.1.2 (A:1-116) Activin A (Inhibin beta A) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.1e-14 Score=111.66 Aligned_cols=47 Identities=34% Similarity=0.902 Sum_probs=36.9
Q ss_pred ccCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCCCCC
Q psy15092 86 SRQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKRKP 132 (225)
Q Consensus 86 ~~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~R~~ 132 (225)
....|+|++|+|+|+++||++|||+|++|+|+||.|.|++++-....
T Consensus 7 ~~~~Ccr~~~~VdF~~lgW~~WIiaP~~y~a~~C~G~C~~~~~~~~~ 53 (116)
T d2arpa1 7 KVNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIAGTSG 53 (116)
T ss_dssp --CCSEEECCEEEHHHHTCTTTEEECSEEECCEEESCCCC-------
T ss_pred CCCceEEEEEEEEeeecCCcceEECCCccccceecccCCCcccccCC
Confidence 34579999999999999999999999999999999999987754433
No 7
>d1lxia_ g.17.1.2 (A:) Bone morphogenetic protein-7 (BMP-7) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.1e-14 Score=109.63 Aligned_cols=45 Identities=42% Similarity=1.163 Sum_probs=40.4
Q ss_pred CeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCCCCCe
Q psy15092 89 SCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKRKPL 133 (225)
Q Consensus 89 ~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~R~~l 133 (225)
.|+|++|+|+|+|+||++|||+|++|+|+||.|.|++++-...+.
T Consensus 2 ~C~r~~~~V~F~~lGW~~WIi~P~~y~a~~C~G~C~~p~~~~~~~ 46 (104)
T d1lxia_ 2 ACKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYMNA 46 (104)
T ss_dssp BSEEECCEEEHHHHTCTTTEEECSEEECCEEESBCCSSCCGGGCC
T ss_pred CceeeeeEEEeeecCCcceEEccCccccEECcCCCCCcccccCCC
Confidence 599999999999999999999999999999999999887644443
No 8
>d2h62a1 g.17.1.2 (A:12-114) Bone morphogenetic protein-2 (BMP-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=1.6e-14 Score=108.58 Aligned_cols=45 Identities=42% Similarity=1.232 Sum_probs=40.8
Q ss_pred CeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCCCCCCe
Q psy15092 89 SCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIPKRKPL 133 (225)
Q Consensus 89 ~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc~R~~l 133 (225)
.|+|++|+|+|.|+||++|||+|++|+|+||.|.|++++-...+.
T Consensus 2 ~C~r~~l~VdF~~lGW~~wIi~P~~y~a~~C~G~C~~~~~~~~~~ 46 (103)
T d2h62a1 2 SCKRHPLYVDFSDVGWNDWIVAPPGYHAFYCHGECPFPLADHLNS 46 (103)
T ss_dssp BSEEECCEEEHHHHTCTTTEEECSEEECCEEECBCCSSCCTTSEE
T ss_pred CceEEEEEEEhhccCCcceEEcCCccccceecccCCcccccccCC
Confidence 599999999999999999999999999999999999887655443
No 9
>d2tgia_ g.17.1.2 (A:) TGF-beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=7.5e-13 Score=100.68 Aligned_cols=42 Identities=26% Similarity=0.696 Sum_probs=37.1
Q ss_pred cCCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCCCC
Q psy15092 87 RQSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFPIP 128 (225)
Q Consensus 87 ~~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~lc 128 (225)
...|+|++|+|+|.+++|.+|||+|++|+|+||.|.|++++-
T Consensus 12 ~~~Ccr~~~~V~F~~~~~~~WIi~P~~y~a~yC~G~C~~~~~ 53 (112)
T d2tgia_ 12 QDNCCLRPLYIDFKRDLGWKWIHEPKGYNANFCAGACPYLWS 53 (112)
T ss_dssp CSBSEEECCEEEHHHHHCCTTEEECSEEECCEEECBCCTTSS
T ss_pred CCCceEEEEEEEEEecCCccceecCCceEeEEecCCCcCCcc
Confidence 356999999999998766679999999999999999988764
No 10
>d1agqa_ g.17.1.2 (A:) Glial cell-derived neurotrophic factor, GDNF {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.74 E-value=1.3e-09 Score=80.41 Aligned_cols=37 Identities=24% Similarity=0.566 Sum_probs=33.6
Q ss_pred CCeeeeCeEEEecccCCccceeCCCCccccccCCCCCCC
Q psy15092 88 QSCERKPLVVKFGDLGWDQWIIEPQSFQSYYCSGKCSFP 126 (225)
Q Consensus 88 ~~C~r~~l~V~F~dlGw~~WIi~P~~~~A~~C~G~C~~~ 126 (225)
..|+|+.|+|+|+||||+ | |+|++|.++||.|.|+.+
T Consensus 2 ~~C~~~~~~v~f~elGw~-~-~~p~~~~~~YC~G~C~~~ 38 (97)
T d1agqa_ 2 RGCVLTAIHLNVTDLGLG-Y-ETKEELIFRYCSGSCEAA 38 (97)
T ss_dssp TTSEEEEEEEEGGGGCSS-C-CCCCEEEEEEEESCCCSC
T ss_pred CcceeeEEEEEHHHcCCc-e-ecCCeeeeeeeccCCCCC
Confidence 359999999999999998 6 599999999999999754
No 11
>d2uuyb1 g.8.1.3 (B:24-74) Tryptase inhibitor {Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]}
Probab=37.89 E-value=3.9 Score=24.33 Aligned_cols=25 Identities=32% Similarity=0.935 Sum_probs=16.5
Q ss_pred CCCccceE--eccCccccccccccCCC
Q psy15092 139 DLGWDQWI--IEPQSFQSYYCSGKCSF 163 (225)
Q Consensus 139 dlGW~dWI--iaP~~y~a~yC~G~C~~ 163 (225)
.|||..=| +--..|.-+||.|.|.-
T Consensus 4 pigwsepvkglckarftryycmgncck 30 (51)
T d2uuyb1 4 PIGWSEPVKGLCKARFTRYYCMGNCCK 30 (51)
T ss_dssp CTTCCCCCCCSBCCCEEEEEEETTEEE
T ss_pred cccccchhhHHHHhhhheeeeecchhh
Confidence 46674433 22357888999999975
No 12
>d1axha_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=28.73 E-value=5.5 Score=22.48 Aligned_cols=17 Identities=29% Similarity=0.768 Sum_probs=14.1
Q ss_pred cCccccccccccCCCCC
Q psy15092 149 PQSFQSYYCSGKCSFPI 165 (225)
Q Consensus 149 P~~y~a~yC~G~C~~~~ 165 (225)
|--|+-+.|+|+|.+-.
T Consensus 10 pcpyne~ccsgsct~k~ 26 (37)
T d1axha_ 10 PCPYNENCCSQSCTFKE 26 (37)
T ss_dssp BCSSGGGBSSSCEEEEE
T ss_pred cCCCccccccccceeee
Confidence 66689999999999854
Done!