RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15093
(179 letters)
>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold,
metal transport; 1.70A {Drosophila melanogaster}
Length = 260
Score = 147 bits (373), Expect = 6e-45
Identities = 128/160 (80%), Positives = 142/160 (88%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENLYSKLKLMLLKKDDVS 77
PPILIDNGLA+LENEKIERHIMKN+PGG+NLFVQDKEVATLIENLY KLKLML+KKD+
Sbjct: 84 PPILIDNGLAILENEKIERHIMKNIPGGYNLFVQDKEVATLIENLYVKLKLMLVKKDEAK 143
Query: 78 INALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEIPTYMKH 137
NAL+SHLRKINDHL + TRFLTGDTMCCFDCELMPRLQHIRVAG YF+ FEIPT++
Sbjct: 144 NNALLSHLRKINDHLSARNTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLTA 203
Query: 138 LWHYMKHMYELEAFTQSCPADQDIINHYKLQQVWLMRRSP 177
LW YM HMY+L+AFTQSCPADQDIINHYKLQQ M++
Sbjct: 204 LWRYMYHMYQLDAFTQSCPADQDIINHYKLQQSLKMKKHE 243
>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC,
GST fold, metal transport; 1.60A {Caenorhabditis
elegans}
Length = 291
Score = 133 bits (335), Expect = 6e-39
Identities = 67/197 (34%), Positives = 91/197 (46%), Gaps = 22/197 (11%)
Query: 3 NTRDKKARTNFEATPPPILIDNG--LAVLENEKIERHIMK-NVPGGHNLFVQDKEVATLI 59
N + + NF PPI+I+ L +N +IE I LF +D I
Sbjct: 64 NVNSEAFKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVPLFEKDPSAEKRI 123
Query: 60 ENLYSKLKLML-------------------LKKDDVSINALMSHLRKINDHLGRKETRFL 100
ENLY KL L + V N + L I+ L +++R+L
Sbjct: 124 ENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSNIDQLLSERKSRYL 183
Query: 101 TGDTMCCFDCELMPRLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQD 160
G++M +DCELMPRL HIR+ G + F+IP HLW Y+ Y AF +SCPADQD
Sbjct: 184 LGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAYILTAYRTAAFIESCPADQD 243
Query: 161 IINHYKLQQVWLMRRSP 177
II+HYK Q +
Sbjct: 244 IIHHYKEQMNLFTNQRE 260
>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC,
chloride channel, ION transport, ionic channel, nucleus,
transport, gated channel; 1.95A {Homo sapiens} PDB:
3kjy_A
Length = 250
Score = 112 bits (280), Expect = 4e-31
Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNV--PGGHNLFVQDKEVATLIENLYSKLKLMLLK--- 72
PIL+ + A + +IE + + + P +L + +E T +++ K +
Sbjct: 82 LPILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVP 141
Query: 73 -KDDVSINALMSHLRKINDHL--------------GRKETRFLTGDTMCCFDCELMPRLQ 117
+D+ L+ L +++ +L RFL GD + DC L+P+L
Sbjct: 142 AQDEALYQQLLRALARLDSYLRAPLEHELAGEPQLRESRRRFLDGDRLTLADCSLLPKLH 201
Query: 118 HIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
+ ++F Q IP ++ + Y+ + + F +CP +I+ Y+
Sbjct: 202 IVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAYR 250
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride
intracellular channels, CLIC2, pore-forming protein
ryanodine receptor, chloride channel; HET: GSH; 1.85A
{Homo sapiens} PDB: 2r5g_A 2per_A*
Length = 247
Score = 108 bits (272), Expect = 6e-30
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNV--PGGHNLFVQDKEVATLIENLYSKLKLMLLKKD- 74
PP L+ N + KIE + + + P +L + KE + NL++K +
Sbjct: 70 PPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKNTQK 129
Query: 75 ---DVSINALMSHLRKINDHLGR----------------KETRFLTGDTMCCFDCELMPR 115
+L+ ++++D+L FL GD + DC L+P+
Sbjct: 130 EANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPK 189
Query: 116 LQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
L I+VA + F+IP +W Y+ + Y E FT +CP D++I N Y
Sbjct: 190 LNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYA 240
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase
superfamily, CLIC4, NCC27, chloride ION channel, metal
transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Length = 267
Score = 105 bits (263), Expect = 2e-28
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNV--PGGHNLFVQDKEVATLIENLYSK----LKLMLL 71
PP + N + KIE + + + P L + E T ++++K +K
Sbjct: 75 PPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRP 134
Query: 72 KKDDVSINALMSHLRKINDHLGR----------------KETRFLTGDTMCCFDCELMPR 115
+ ++ L+ L+K++++L +FL G+ M DC L+P+
Sbjct: 135 EANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPK 194
Query: 116 LQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
L ++V + F+IP M +W Y+ + Y + FT +CP+D+++ Y
Sbjct: 195 LHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1;
glutathione-S-tranferase superfamily, chloride ION
channel, metal transport; 1.40A {Homo sapiens} SCOP:
a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A
3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Length = 241
Score = 98.8 bits (246), Expect = 4e-26
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNV--PGGHNLFVQDKEVATLIENLYSKLKLMLLKKD- 74
P L+ + KIE + + P L + E T ++++K + +
Sbjct: 64 LPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNP 123
Query: 75 ---DVSINALMSHLRKINDHL----------------GRKETRFLTGDTMCCFDCELMPR 115
D L+ L+ ++++L G + +FL G+ + DC L+P+
Sbjct: 124 ALNDNLEKGLLKALKVLDNYLTSPLPEGVDETSAEDEGVSQRKFLDGNELTLADCNLLPK 183
Query: 116 LQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
L ++V + F IP + + Y+ + Y E F +CP D++I Y+
Sbjct: 184 LHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYE 234
>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A
{Bombyx mori}
Length = 246
Score = 50.5 bits (121), Expect = 4e-08
Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 51 QDKEVATLIENLYSKLKLMLLKKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDC 110
QD+ + L ++ L L + T + G+ D
Sbjct: 118 QDRLLIERFNELIKGSLECFDTNFAFGSEQIIQTLEIFEKELTNRGTNYFGGNRPGMLDY 177
Query: 111 ELMP---RLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
+ P RL +R E + + + M + + + Q+ ++YK
Sbjct: 178 MVWPWVERLYLLRCVNDRKF-VEKKSLFPNFADWGDQMQLDDIVKKHAHSPQEYFDYYK 235
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase;
HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Length = 241
Score = 47.4 bits (113), Expect = 4e-07
Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 14/123 (11%)
Query: 51 QDKEVATLIENLYSKLKLMLLKKD----DVSINALMSHLRKINDHLGRKETRFLTGDTMC 106
K + L + S + + ++ K+ + L K+T F G+++
Sbjct: 112 CQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSIS 171
Query: 107 CFDCELMP---RLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIIN 163
D + P RL+ +++ E + L +M M E + +++D
Sbjct: 172 MIDYLIWPWFERLEAMKL-------NECVDHTPKLKLWMAAMKEDPTVSALLTSEKDWQG 224
Query: 164 HYK 166
+
Sbjct: 225 FLE 227
>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis,
DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania
infantum}
Length = 471
Score = 44.3 bits (105), Expect = 6e-06
Identities = 14/140 (10%), Positives = 43/140 (30%), Gaps = 15/140 (10%)
Query: 53 KEVATLIENLYSKLKLMLLKKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCEL 112
+V I + L+ L + +++ +++ + + + D L
Sbjct: 125 AQVGDFIGAAHGLLRDPLSGEKRKAMDDNAAYVDGLLAAN-QTTGPYYCDGEFTMADVAL 183
Query: 113 MPRLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHY------- 165
+P L ++ A Y+ +++ + + + ++ P I +Y
Sbjct: 184 VPFLVRLKPALMYYAGYDVFCKAPRMKALWAAAAQRASVRETSPTAAQCIENYRHLVPES 243
Query: 166 -------KLQQVWLMRRSPY 178
++ P+
Sbjct: 244 APMMGANGGHVLYSNLFCPF 263
Score = 40.5 bits (95), Expect = 1e-04
Identities = 22/164 (13%), Positives = 46/164 (28%), Gaps = 18/164 (10%)
Query: 18 PPILIDNGLAVLE----NEKIERHIMKNVPGGHNLFVQDKE-------VATLIENLYSKL 66
P + +G AV E + I+ G + D E L
Sbjct: 302 PALFTPSGEAVHESQLIVQYIDC---VATKGSALVPRGDAEKEYEVGFFVENAGYFVGGL 358
Query: 67 KLMLLKKDDVSINALMSHLRKINDHLGRK---ETRFLTGDTMCCFDCELMPRLQHIRVAG 123
+++ + + L ++ L + E F G M D ++P L +
Sbjct: 359 MSWIIRGGEDAKAELQWAAGELEQQLAKHPFGEGPFFGGKRMNAGDVAILPFLVRAKAFM 418
Query: 124 SYF-MQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
F +++ + L + ++ H +
Sbjct: 419 PEFSGGYDLFAHFPLLNGLAEAGMATPEAKSVFRTLEEYKEHIR 462
>2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class
GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A
{Glycine max} PDB: 3fhs_A*
Length = 219
Score = 43.1 bits (102), Expect = 1e-05
Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 14/160 (8%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQD-------KEVATLIENLYSKLKLML 70
P+LI NG + E+ ++I + + L D + A ++ L +
Sbjct: 54 IPVLIHNGKPICESLIAVQYIEEVWNDRNPLLPSDPYQRAQTRFWADYVDKKIYDLGRKI 113
Query: 71 LKKD----DVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYF 126
+ + + L+ + + LG K + GD + D L+P + F
Sbjct: 114 WTSKGEEKEAAKKEFIEALKLLEEQLGDK--TYFGGDNLGFVDIALVPFYTWFKAY-ETF 170
Query: 127 MQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
I + + K + E+ +S P Q +
Sbjct: 171 GTLNIESECPKFIAWAKRCLQKESVAKSLPDQQKVYEFIM 210
>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH;
1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5
Length = 231
Score = 42.9 bits (101), Expect = 1e-05
Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 20/168 (11%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFV--------------QDKEVATLIENLY 63
P+L+ G V E+ I +++ PG +L + A ++
Sbjct: 56 IPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKL 115
Query: 64 SKLKLMLLKKD----DVSINALMSHLRKINDHLGRKE-TRFLTGDTMCCFDCELMPRLQH 118
L + + + LR + LG +E G + D L+P
Sbjct: 116 YDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAW 175
Query: 119 IRVAGSYFMQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
F + L + + +++ + P+ + + +
Sbjct: 176 FYSYERCG-GFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVG 222
>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase,
dehydroascorbate reductase, reductase; 1.70A {Homo
sapiens} PDB: 3q19_A* 3qag_A*
Length = 239
Score = 42.7 bits (101), Expect = 1e-05
Identities = 13/98 (13%), Positives = 27/98 (27%), Gaps = 10/98 (10%)
Query: 72 KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMP---RLQHIRVAGSYFMQ 128
++ AL + + L + T F G ++ D L P RL +
Sbjct: 138 RESTNLKAALRQEFSNLEEILEYQNTTFFGGTSISMIDYLLWPWFERLDVYGI------- 190
Query: 129 FEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
+ ++ L ++ M +
Sbjct: 191 LDCVSHTPALRLWISAMKWDPTVSALLMDKSIFQGFLN 228
>3r3e_A Uncharacterized protein YQJG; thioredoxin domain, GST, glutathione
transferase, glutathion disulfide bond reductase,
transferase; HET: GSH; 2.21A {Escherichia coli}
Length = 328
Score = 42.8 bits (101), Expect = 2e-05
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 11/96 (11%)
Query: 75 DVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQF----- 129
D ++ + L ++ LG+ R+LTG+ + D L L +R Y F
Sbjct: 207 DEAVAKVFESLARLEQILGQH--RYLTGNQLTEADIRLWTTL--VRFDPVYVTHFKCDKH 262
Query: 130 EIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHY 165
I Y +L+ +++ +Y++ ++ D I NHY
Sbjct: 263 RISDY-LNLYGFLRDIYQMPGIAETVNFDH-IRNHY 296
>3m1g_A Putative glutathione S-transferase; ECM4-like subfamily, GST_C
family, structural genomics, PSI- protein structure
initiative; 2.10A {Corynebacterium glutamicum}
Length = 362
Score = 41.3 bits (97), Expect = 5e-05
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 75 DVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQF----- 129
+ + L L + D L + R+L GD + D L P L +R Y F
Sbjct: 213 NEAYKRLWVALDWLEDRLSTR--RYLMGDHITEADIRLYPTL--VRFDAVYHGHFKCGRN 268
Query: 130 EIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHY 165
+I +LW Y++ +++ F + + I HY
Sbjct: 269 KITEM-PNLWGYLRDLFQTPGFGDTTDFTE-IKQHY 302
>3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete
chrysosporium}
Length = 352
Score = 41.3 bits (97), Expect = 7e-05
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 11/97 (11%)
Query: 75 DVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQF----- 129
+ ++ L L ++ L + +L G + D L + +R Y F
Sbjct: 235 EAAVIPLFESLDRLEKMLEGQ--DYLIGGQLTEADIRLFVTI--VRFDPVYVTHFKCNLR 290
Query: 130 EIPTYMKHLWHYMKHMY-ELEAFTQSCPADQDIINHY 165
I +L +M+ +Y AF +C + I HY
Sbjct: 291 TIRDGYPNLHRWMRKLYWGNPAFKDTCNFEH-IKTHY 326
>4dej_A Glutathione S-transferase related protein; transferase-like
protein, transcription regulation; 2.90A {Idiomarina
loihiensis}
Length = 231
Score = 40.4 bits (95), Expect = 1e-04
Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 14/155 (9%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFV------QDKEVATLIENLYSKLKLMLL 71
P L+D L + + I ++ + P + V + + IE + L +
Sbjct: 62 KPTLVDRELVLYNAQIIMEYLDERFPHPPLMPVYPVARGTSRLMMYRIERDWYSLAEKIQ 121
Query: 72 KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEI 131
K D + L + + +T + + DC L P L + ++
Sbjct: 122 KNDAQARQELKEGILSLAPIFA--DTPYFMSEEFSLVDCYLAPLLWRLPA-----YGIDL 174
Query: 132 PTY-MKHLWHYMKHMYELEAFTQSCPADQDIINHY 165
K + YM ++E + F S ++ +
Sbjct: 175 EGQGAKEIKQYMVRLFERKTFQDSLTEEEKELARN 209
>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET:
CIT; 2.02A {Yersinia pestis}
Length = 213
Score = 40.0 bits (94), Expect = 1e-04
Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Query: 72 KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEI 131
++ + + L L I ET F + DC L P L + V G F
Sbjct: 123 QEAEAARKQLREELLSIAPVFN--ETPFFMSEEFSLVDCYLAPLLWRLPVLGIEFTGAGS 180
Query: 132 PTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
L YM ++E +AF S + ++
Sbjct: 181 KE----LKGYMTRVFERDAFLASLTEAEREMHLKT 211
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.4 bits (94), Expect = 2e-04
Identities = 30/166 (18%), Positives = 49/166 (29%), Gaps = 68/166 (40%)
Query: 7 KKARTNFEATPPPILIDNGLAV--LENEKIERHIMK-N--VPG----------GHNLFVQ 51
+ + N E P P+ L++ L E+++ ++ K N +P G V
Sbjct: 325 EDSLENNEGVPSPM-----LSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLV- 378
Query: 52 DKEVATLIENLYSKLKLMLLKKDDVSINALMSHLRKI-----ND-----HLGRK---ETR 98
V+ ++LY L LRK D RK R
Sbjct: 379 ---VSGPPQSLY----------------GLNLTLRKAKAPSGLDQSRIPFSERKLKFSNR 419
Query: 99 FLTGDTMCCFDCELM----PRL------QHIRVAGSYFMQFEIPTY 134
FL F L+ + ++ +IP Y
Sbjct: 420 FLP--VASPFHSHLLVPASDLINKDLVKNNVSFNAK---DIQIPVY 460
Score = 32.3 bits (73), Expect = 0.093
Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 63/211 (29%)
Query: 10 RTNFEAT-PPPILIDNGLAVLENE---KIE------RHIMKNVPGG-------------- 45
+ F P P G A ++E E ++ V
Sbjct: 34 QEQFNKILPEP---TEGFA-ADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLT 89
Query: 46 --HNLFVQDKEVATLIENLYSKLKLMLLKKDDVS---INALMSHLRKIN--------DHL 92
N +++ ++ L L + L+K ++ I A + R + +
Sbjct: 90 EFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAV 149
Query: 93 GRKETRFLT-----GDTMCCFDCELMPRLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYE 147
G + + G+T F+ E L+ + + I + L ++ +
Sbjct: 150 GEGNAQLVAIFGGQGNTDDYFE-E----LRDLYQTYHVLVGDLIKFSAETLSELIRTTLD 204
Query: 148 LE-AFTQSCPADQDIINHYKLQQVWLMRRSP 177
E FTQ +I+ WL S
Sbjct: 205 AEKVFTQGL----NILE-------WLENPSN 224
>3lyp_A Stringent starvation protein A; structural genomics,
GST-superfamily, SSPA, stringent starva protein A
homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB:
3mdk_A
Length = 215
Score = 37.7 bits (88), Expect = 9e-04
Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 72 KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEI 131
+ L L ++ + F + DC L+P L + V + E+
Sbjct: 123 AARVQARKELRESLTGVSPLFA--DKPFFLSEEQSLVDCCLLPILWRLPV-----LGIEL 175
Query: 132 PTYMKHLWHYMKHMYELEAFTQSCPADQ 159
P K L YM+ + EAF S +
Sbjct: 176 PRQAKPLLDYMERQFAREAFQASLSGVE 203
>3lyk_A Stringent starvation protein A homolog; structural genomics,
GST-superfamily, SSPA, PSI-2, protein structure
initiative; 2.10A {Haemophilus influenzae}
Length = 216
Score = 36.9 bits (86), Expect = 0.001
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 6/88 (6%)
Query: 72 KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEI 131
K+ ++ L L I + + + DC + P L ++ G F
Sbjct: 119 KEKTSALKQLKEELLGIAPIFQ--QMPYFMNEEFGLVDCYVAPLLWKLKHLGVEF----T 172
Query: 132 PTYMKHLWHYMKHMYELEAFTQSCPADQ 159
T K + YM+ ++ ++F QS
Sbjct: 173 GTGSKAIKAYMERVFTRDSFLQSVGEAA 200
>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant,
TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP:
a.45.1.1 c.47.1.5
Length = 230
Score = 34.3 bits (79), Expect = 0.012
Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 16/165 (9%)
Query: 18 PPILIDNGLAVLE--------NEKIERHIMKNVPGGHNLFVQDKEVATLIEN-LYSKLKL 68
P+LI NG V E +E +P + +++ L + +
Sbjct: 56 IPVLIHNGAPVCESMIILQYIDEVFASTGPSLLPADPYERAIARFWVAYVDDKLVAPWRQ 115
Query: 69 MLLKKDD----VSINALMSHLRKINDHLGR--KETRFLTGDTMCCFDCELMPRLQHIRVA 122
L K + + + + L K F GD + D L L ++V
Sbjct: 116 WLRGKTEEEKSEGKKQAFAAVGVLEGALRECSKGGGFFGGDGVGLVDVALGGVLSWMKVT 175
Query: 123 GSYF-MQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
+ + L +++ EL+A + P ++ K
Sbjct: 176 EALSGDKIFDAAKTPLLAAWVERFIELDAAKAALPDVGRLLEFAK 220
>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1,
NPPSFA, national project protein structural and
functional analyses; HET: GSH; 1.40A {Mus musculus} PDB:
2cz3_A 1fw1_A*
Length = 223
Score = 32.6 bits (75), Expect = 0.040
Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 72 KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEI 131
+ + + S + L ++ GD + D L+P++ + ++
Sbjct: 133 NQMQWAQKVITSGFNALEKILQSTAGKYCVGDEVSMADVCLVPQVANAERFK-----VDL 187
Query: 132 PTYMKHLWHYMKHMYELEAFTQSCPADQ 159
Y + H K + LE F S P Q
Sbjct: 188 SPY-PTISHINKELLALEVFQVSHPRRQ 214
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.9 bits (74), Expect = 0.059
Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 37/167 (22%)
Query: 34 IERHIMKNVPGGHNLFV-----QDKEVA---TLIENLYSKLK------LMLLKKDDVSIN 79
+E+ ++ ++++ + E A +++++ Y+ K L+ D +
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH-YNIPKTFDSDDLIPPYLDQYFYS 475
Query: 80 ALMSHLRKINDHLGRKET--------RFLTG-----DTMCCFDCELMPRLQHIRVAGSYF 126
+ HL+ I +H R RFL T ++ LQ ++ Y
Sbjct: 476 HIGHHLKNI-EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534
Query: 127 MQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYKLQQVWLM 173
+ Y + + + F + + L ++ LM
Sbjct: 535 C--------DNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALM 573
Score = 27.9 bits (61), Expect = 2.2
Identities = 25/204 (12%), Positives = 55/204 (26%), Gaps = 64/204 (31%)
Query: 20 ILI---DNGLAVLENEKIERHI-MKNVPGGHNLFVQDKEVATLIENLYSKLKLMLLKKDD 75
IL+ + + HI + + D EV +L+ Y + L ++
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMT---LTPD-EVKSLLLK-YLDCRPQDLPREV 322
Query: 76 VSINALMSHL--RKINDHLGR-KETRFLTGDTM-----CCFDCELMPRLQHIRVAGSYFM 127
++ N + I D L + + D + + L P F
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV-LEPAEYR-----KMFD 376
Query: 128 QFE-------IPTY-MKHLWHYMKHMYELEAFTQSC------------------------ 155
+ IPT + +W + ++
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIK-SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435
Query: 156 --PADQD------IINHYKLQQVW 171
+ + I++HY + + +
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTF 459
Score = 27.5 bits (60), Expect = 3.0
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 32/96 (33%)
Query: 6 DKKARTNFEATPPPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENLYSK 65
++K R + A I N L L+ + +I N + Y +
Sbjct: 504 EQKIRHDSTAWNASGSILNTLQQLK--FYKPYICDN------------------DPKYER 543
Query: 66 LKLMLLKKDDVSINALMSHLRKINDHLGR-KETRFL 100
L +NA++ L KI ++L K T L
Sbjct: 544 L-----------VNAILDFLPKIEENLICSKYTDLL 568
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.3 bits (67), Expect = 0.18
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 7/28 (25%)
Query: 59 IENLYSKLKLMLLKKDD----VSINALM 82
++ L + LKL DD ++I A M
Sbjct: 22 LKKLQASLKLY---ADDSAPALAIKATM 46
>1c8b_A Spore protease; novel fold, hydrolase; 3.00A {Bacillus megaterium}
SCOP: c.56.1.2
Length = 371
Score = 30.6 bits (69), Expect = 0.22
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 30 ENEKIERHIMKNV--PGGHNLFVQDKEVATLIENL 62
+ EK R ++ V P GHNL V KEV IE++
Sbjct: 313 DEEK--RRLIHEVLAPLGHNLMVTPKEVDMFIEDM 345
>2bv2_A Ciona betagamma-crystallin; calcium binding, eye lens, spherulin,
chordate, ascidian; 1.55A {Ciona intestinalis}
Length = 83
Score = 28.0 bits (63), Expect = 0.53
Identities = 6/50 (12%), Positives = 11/50 (22%), Gaps = 7/50 (14%)
Query: 100 LTGDTMCCFDCELMPRLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELE 149
L + I V + F+ + Y+L
Sbjct: 18 LETSVSDLNVHGFNDIVSSIIVESGTWFVFDDE-------GFSGPSYKLT 60
>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans
serovar lai} PDB: 3ubl_A*
Length = 242
Score = 28.9 bits (65), Expect = 0.82
Identities = 24/173 (13%), Positives = 53/173 (30%), Gaps = 25/173 (14%)
Query: 19 PILIDNGLAVLENEKIERHIMKNVPGGHNLFVQD-----------KEVATLIENLYSKLK 67
P+L +G + E+ I + P L +D + T ++ ++
Sbjct: 52 PVLEMDGKFIFESGAILEFLDTIFPQTPKLIPEDPWEAARVREISTIIETYLDIPARRIY 111
Query: 68 LMLLKKDDVSI----NALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAG 123
L K + + L+ ++ + + ++ G+ DC L
Sbjct: 112 LPAAKVSPEIVEEVHSTLVKGIKALQRVVRFS--PYIAGNVFTLADCSGFAHL------- 162
Query: 124 SYFMQFEIPTYM-KHLWHYMKHMYELEAFTQSCPADQDIINHYKLQQVWLMRR 175
S + P Y H + E F ++ + ++ + L R
Sbjct: 163 SVLDEELRPFYPNNHPLDLLNGWKEYFVFMKTKAGPALVEKDKQILKKILARA 215
>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic,
heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5
Length = 224
Score = 28.6 bits (64), Expect = 0.93
Identities = 19/134 (14%), Positives = 48/134 (35%), Gaps = 18/134 (13%)
Query: 6 DKKARTNFEATPPPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENLYSK 65
D K + + + P L+D + ++ I R+I + HN+ + +E ++ + ++
Sbjct: 51 DVKFKLDLDFPNLPYLLDGKNKITQSNAILRYIARK----HNMCGETEEEKIRVDIIENQ 106
Query: 66 LKLMLLK------------KDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELM 113
+ + + L L++ + LG+ + G+ + D
Sbjct: 107 VMDFRTQLIRLCYSSDHEKLKPQYLEELPGQLKQFSMFLGKFS--WFAGEKLTFVDFLTY 164
Query: 114 PRLQHIRVAGSYFM 127
L R+ +
Sbjct: 165 DILDQNRIFDPKCL 178
>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP:
a.45.1.1 c.47.1.5
Length = 221
Score = 27.6 bits (62), Expect = 1.9
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Query: 72 KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEI 131
+K NA+ + L + TGD + D L P I A + F Q +
Sbjct: 131 EKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAP---QIHGAINRF-QINM 186
Query: 132 PTYMKHLWHYMKHMYELEAFTQSCPADQ 159
Y L + EL AF + P Q
Sbjct: 187 EPY-PTLAKCYESYNELPAFQNALPEKQ 213
>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm,
polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A
1gul_A*
Length = 222
Score = 27.5 bits (61), Expect = 2.2
Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 34/171 (19%)
Query: 3 NTRDKKARTNFEATPP----PILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATL 58
T+++ + P++ +G+ +++ I +I HNLF ++ + TL
Sbjct: 36 ETKEQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSILHYIADK----HNLFGKNLKERTL 91
Query: 59 IENL---------------YSKLKLMLLKKDDVSINALMSHLRKINDHLGRKETRFLTGD 103
I+ + K + +++ A++ + L FL G+
Sbjct: 92 IDMYVEGTLDLLELLIMHPFLKPDDQQKEVVNMAQKAIIRYFPVFEKILRGHGQSFLVGN 151
Query: 104 TMCCFDCELMPRLQHIRVAGSYFMQFEIPTYMK---HLWHYMKHMYELEAF 151
+ D L+ + + IP + L Y + +
Sbjct: 152 QLSLADVILLQTILALEEK--------IPNILSAFPFLQEYTVKLSNIPTI 194
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 27.5 bits (61), Expect = 2.5
Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 124 SYFMQFEIPTYMKH-LWHYMKHMYELEAFTQSCPADQDIINHYKLQ 168
++ F+ Y +H LWH +K +A + + ++ Q
Sbjct: 94 KVWLLFD---YAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136
>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis
sinensis}
Length = 218
Score = 27.1 bits (60), Expect = 2.6
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 10/124 (8%)
Query: 6 DKKARTNFEATPPPILIDNGLAVLENEKIERHIMKN---VPGGHNLFVQDKEVATLIENL 62
+ K E P D ++ ++ I R+I + + + + +L
Sbjct: 43 NDKHNLGLELPNLPYYKDGNFSLTQSLAILRYIADKHNMIGNTPVERAKISMIEGGLVDL 102
Query: 63 YSKLKLMLLKKD-----DVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQ 117
+ + + ++ + L S LR + LG +L G T D L
Sbjct: 103 RAGVSRIAYQETFEQLKVPYLQQLPSTLRMWSQFLGNNS--YLHGSTPTHLDFMFYEALD 160
Query: 118 HIRV 121
IR
Sbjct: 161 VIRY 164
>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator
americanus}
Length = 206
Score = 26.9 bits (60), Expect = 2.9
Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 23/107 (21%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENLYSKLKLMLLK----- 72
P+L +G + ++ I R++ + + ++++L + ++
Sbjct: 51 VPVLEVDGKQLAQSLAICRYLARQ----FGFAGKSTFDEAVVDSLADQYSDYRVEIKSFF 106
Query: 73 --------------KDDVSINALMSHLRKINDHLGRKETRFLTGDTM 105
K +V + A I L + + FL GD++
Sbjct: 107 YTVIGMREGDVEQLKKEVLLPARDKFFGFITKFLKKSPSGFLVGDSL 153
>3n5o_A Glutathione transferase; seattle structural genomics center for
infectious disease, S GST, pathogenic fungus,
coccidioidomycosis; HET: GSH; 1.85A {Coccidioides
immitis} PDB: 3lg6_A*
Length = 235
Score = 27.0 bits (60), Expect = 3.0
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 84 HLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEIPTYMKHLWHYMK 143
+ L RF GD + D L+P + G ++ + +
Sbjct: 157 GFGAVEKLLELSAGRFCVGDEITLADVCLVPAVWAAERVG-----MDLARF-PITKRVFE 210
Query: 144 HMYELEAFTQSCPADQ 159
M + EA ++ Q
Sbjct: 211 EMLKEEAVQKAHWQKQ 226
>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A
{Necator americanus}
Length = 206
Score = 27.0 bits (60), Expect = 3.4
Identities = 15/123 (12%), Positives = 42/123 (34%), Gaps = 23/123 (18%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLI-------ENLYSKLKLML 70
P+L ++G + ++ I R++ + + L+ ++ ++++ L
Sbjct: 51 IPVLEEDGKQLAQSFAIARYLSRK----FGFAGKTPFEEALVDSVADQYKDYINEIRPYL 106
Query: 71 L------------KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQH 118
++ + A + L + ++ +L GD++ D L
Sbjct: 107 RVVAGVDQGDPEKLFKELLLPAREKFFGFMKKFLEKSKSGYLVGDSVTYADLCLAEHTSG 166
Query: 119 IRV 121
I
Sbjct: 167 IAA 169
>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI
onchocerca volvulus, immune modulation; HET: GSH; 2.00A
{Onchocerca volvulus}
Length = 225
Score = 27.0 bits (60), Expect = 3.5
Identities = 18/119 (15%), Positives = 37/119 (31%), Gaps = 20/119 (16%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENLYSKL-----KLMLL- 71
P+L +G + E+ IE + L + I + + KL+
Sbjct: 75 VPMLNVSGNVLGESHAIELLLGGR----FGLLGTNDWEEAKIMAVVLNIDELFQKLIPWT 130
Query: 72 ----------KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIR 120
++S + +M L + L T + G+ + D + L +
Sbjct: 131 HEKNTTKKAELFRNLSESDVMPFLGRYEKFLKESTTGHIVGNKVSVADLTVFNMLMTLD 189
>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione
transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis
elegans}
Length = 207
Score = 26.9 bits (60), Expect = 3.6
Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 29/152 (19%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLI-------ENLYSKLKLML 70
P L +G + ++ I R + + L + + ++ S+ +
Sbjct: 53 LPFLEVDGKKLAQSHAIARFLARE----FKLNGKTAWEEAQVNSLADQYKDYSSEARPYF 108
Query: 71 L------------KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQH 118
K D+ + A + + L + FL GD++ D +
Sbjct: 109 YAVMGFGPGDVETLKKDIFLPAFEKFYGFLVNFLKASGSGFLVGDSLTWIDLAIAQHSAD 168
Query: 119 IRVAGSYFMQFEIPTYMKHLWHYMKHMYELEA 150
+ G F +F L + + + +
Sbjct: 169 LIAKGGDFSKF------PELKAHAEKIQAIPQ 194
>1gsu_A GST, CGSTM1-1, class-MU glutathione S-transferase; detoxification
enzyme, S-hexyl glutathione; HET: GTX; 1.94A {Gallus
gallus} SCOP: a.45.1.1 c.47.1.5 PDB: 1c72_A*
Length = 219
Score = 26.7 bits (59), Expect = 3.8
Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 23/157 (14%)
Query: 6 DKKARTNFEATPPPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENLYSK 65
++K + + P LID + + ++ I R+I + HN+ + + ++ L +
Sbjct: 47 NEKEKLGLDFPNLPYLIDGDVKLTQSNAILRYIARK----HNMCGETEVEKQRVDVLENH 102
Query: 66 L-----KLMLL-------KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELM 113
L L K + L LR+++ LG + + GD + D
Sbjct: 103 LMDLRMAFARLCYSPDFEKLKPAYLEQLPGKLRQLSRFLGSRS--WFVGDKLTFVDFLAY 160
Query: 114 PRLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYELEA 150
L R + P +L +++ LE
Sbjct: 161 DVLDQQR-----MFVPDCPELQGNLSQFLQRFEALEK 192
>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus}
SCOP: a.45.1.1 c.47.1.5
Length = 206
Score = 26.6 bits (59), Expect = 3.8
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 23/123 (18%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENL--------------- 62
P+L +G + +++ I R++ K + LI++L
Sbjct: 51 VPVLEVDGQQLAQSQAICRYLAKT----FGFAGATPFESALIDSLADAYTDYRAEMKTYY 106
Query: 63 ----YSKLKLMLLKKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQH 118
+ K DV + A L I L + + FL GD + D + +
Sbjct: 107 YTALGFMTGDVDKPKTDVLLPARTKFLGFITKFLKKNSSGFLVGDKISWVDLLVAEHVAD 166
Query: 119 IRV 121
+
Sbjct: 167 MTN 169
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein
structure initiative, midwest center for structural
genomics, MCSG; HET: MES; 1.30A {Geobacillus
stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Length = 119
Score = 26.3 bits (58), Expect = 3.8
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 32 EKIERHIMKNVPGGHNLFV--QDKEVAT 57
EK+ R + P +L++ +EVA
Sbjct: 64 EKLRRQFRRMFPEAEHLYIDRAYREVAA 91
>2c4j_A Glutathione S-transferase MU 2; glutathione transferase, multigene
family; HET: GSO; 1.35A {Homo sapiens} SCOP: a.45.1.1
c.47.1.5 PDB: 1xw5_A* 1ykc_A* 2ab6_A* 2gtu_A 3gtu_A
3gur_A* 1hna_A* 1hnb_A* 1hnc_A* 1xw6_A* 1xwk_A* 1yj6_A*
2f3m_A* 2dc5_A 1gtu_A 4gtu_A 6gsu_A* 6gsv_A* 6gsw_A*
2gst_A* ...
Length = 218
Score = 26.3 bits (58), Expect = 6.0
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 18 PPILIDNGLAVLENEKIERHIMKNVPGGHNLFVQDKEVATLIENLYSKL-----KLMLL- 71
P LID + ++ I R+I + HNL + ++ + L ++ +L L
Sbjct: 60 LPYLIDGTHKITQSNAILRYIARK----HNLCGESEKEQIREDILENQFMDSRMQLAKLC 115
Query: 72 ------KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRV 121
K + AL L+ + LG++ + GD + D L+ +V
Sbjct: 116 YDPDFEKLKPEYLQALPEMLKLYSQFLGKQP--WFLGDKITFVDFIAYDVLERNQV 169
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.137 0.421
Gapped
Lambda K H
0.267 0.0702 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,739,467
Number of extensions: 152754
Number of successful extensions: 426
Number of sequences better than 10.0: 1
Number of HSP's gapped: 411
Number of HSP's successfully gapped: 63
Length of query: 179
Length of database: 6,701,793
Length adjustment: 87
Effective length of query: 92
Effective length of database: 4,272,666
Effective search space: 393085272
Effective search space used: 393085272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 54 (24.6 bits)