RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15093
         (179 letters)



>d1k0ma1 a.45.1.1 (A:92-240) Chloride intracellular channel 1
           (clic1) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 149

 Score = 82.5 bits (203), Expect = 3e-21
 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 20/139 (14%)

Query: 48  LFVQDKEVATLIENLYSKLKLMLLKKDD----VSINALMSHLRKINDHLGRK-------- 95
           L   + E  T   ++++K    +   +          L+  L+ ++++L           
Sbjct: 5   LAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEGVDET 64

Query: 96  --------ETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEIPTYMKHLWHYMKHMYE 147
                   + +FL G+ +   DC L+P+L  ++V    +  F IP   + +  Y+ + Y 
Sbjct: 65  SAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYA 124

Query: 148 LEAFTQSCPADQDIINHYK 166
            E F  +CP D++I   Y+
Sbjct: 125 REEFASTCPDDEEIELAYE 143


>d1oyja1 a.45.1.1 (A:86-230) Class tau GST {Rice (Oryza sativa)
           [TaxId: 4530]}
          Length = 145

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 12/96 (12%), Positives = 30/96 (31%), Gaps = 2/96 (2%)

Query: 72  KKDDVSINALMSHLRKINDHLGRKE-TRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFE 130
           +    +   +   LR +   LG +E      G  +   D  L+P              F 
Sbjct: 43  EPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERC-GGFS 101

Query: 131 IPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
           +      L  + +    +++  +  P+ + + +   
Sbjct: 102 VEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVG 137


>d1gwca1 a.45.1.1 (A:87-224) Class tau GST {Aegilops tauschii, also
           known as Triticum tauschii [TaxId: 37682]}
          Length = 138

 Score = 39.1 bits (90), Expect = 6e-05
 Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 49  FVQDKEVATLIENLYSKLKLMLLKKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCF 108
           +V DK VA   + L  K +    +    +  A+      + +        F  GD +   
Sbjct: 18  YVDDKLVAPWRQWLRGKTEEEKSEGKKQAFAAVGVLEGALRECSKGG--GFFGGDGVGLV 75

Query: 109 DCELMPRLQHIRVAGSYF-MQFEIPTYMKHLWHYMKHMYELEAFTQSCPADQDIINHYK 166
           D  L   L  ++V  +    +         L  +++   EL+A   + P    ++   K
Sbjct: 76  DVALGGVLSWMKVTEALSGDKIFDAAKTPLLAAWVERFIELDAAKAALPDVGRLLEFAK 134


>d1e6ba1 a.45.1.1 (A:88-220) Class zeta GST {Mouse-ear cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 133

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 17/88 (19%), Positives = 26/88 (29%), Gaps = 5/88 (5%)

Query: 72  KKDDVSINALMSHLRKINDHLGRKETRFLTGDTMCCFDCELMPRLQHIRVAGSYFMQFEI 131
           +K     NA+      +   L     +  TGD +   D  L P++               
Sbjct: 44  EKTAWVNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQIHGA-----INRFQIN 98

Query: 132 PTYMKHLWHYMKHMYELEAFTQSCPADQ 159
                 L    +   EL AF  + P  Q
Sbjct: 99  MEPYPTLAKCYESYNELPAFQNALPEKQ 126


>d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium
           [TaxId: 1404]}
          Length = 371

 Score = 30.6 bits (69), Expect = 0.10
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)

Query: 30  ENEKIERHIMKNV--PGGHNLFVQDKEVATLIENL 62
           + EK  R ++  V  P GHNL V  KEV   IE++
Sbjct: 313 DEEK--RRLIHEVLAPLGHNLMVTPKEVDMFIEDM 345


>d2qtva4 d.109.2.1 (A:627-768) Sec23 {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 142

 Score = 25.1 bits (55), Expect = 3.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query: 74  DDVSINALMSHLRKI 88
           DDVS+   M+HL+++
Sbjct: 122 DDVSLQNFMTHLQQV 136


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.137    0.421 

Gapped
Lambda     K      H
   0.267   0.0666    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 686,600
Number of extensions: 30464
Number of successful extensions: 91
Number of sequences better than 10.0: 1
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 10
Length of query: 179
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 99
Effective length of database: 1,309,196
Effective search space: 129610404
Effective search space used: 129610404
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 50 (23.2 bits)