Query psy15097
Match_columns 106
No_of_seqs 137 out of 613
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 20:31:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15097.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15097hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0u_A EF-2, elongation factor 99.3 1.3E-12 4.3E-17 113.0 6.5 76 2-78 185-261 (842)
2 4fn5_A EF-G 1, elongation fact 94.0 0.027 9.1E-07 47.6 2.6 29 74-102 423-451 (709)
3 1n0u_A EF-2, elongation factor 88.2 0.18 6.1E-06 43.6 1.7 30 74-103 493-522 (842)
4 2rdo_7 EF-G, elongation factor 87.9 0.19 6.6E-06 42.6 1.8 27 76-102 422-448 (704)
5 2xex_A Elongation factor G; GT 87.7 0.12 4.1E-06 43.7 0.4 27 76-102 414-440 (693)
6 3j25_A Tetracycline resistance 85.8 0.12 4.2E-06 43.1 -0.5 29 74-102 349-377 (638)
7 1dar_A EF-G, elongation factor 85.7 0.19 6.6E-06 42.4 0.6 29 74-102 413-441 (691)
8 2dy1_A Elongation factor G; tr 80.4 0.41 1.4E-05 40.2 0.5 28 75-102 388-415 (665)
9 2h5e_A Peptide chain release f 69.1 3.1 0.00011 34.0 3.0 26 76-102 403-428 (529)
10 3vqt_A RF-3, peptide chain rel 57.8 4.3 0.00015 33.3 1.8 28 74-101 419-446 (548)
11 2dk7_A Transcription elongatio 53.4 6.8 0.00023 24.6 1.8 30 64-93 32-61 (73)
12 2ywe_A GTP-binding protein LEP 50.6 7.1 0.00024 32.7 2.0 27 76-102 303-329 (600)
13 3rnv_A HC-Pro, helper componen 46.6 7 0.00024 27.9 1.2 58 30-99 39-99 (158)
14 3e3x_A BIPA; MCSG,PSI2, struct 42.5 22 0.00074 27.9 3.5 21 83-103 56-76 (332)
15 2jzy_A Transcriptional regulat 42.2 53 0.0018 20.6 4.9 51 14-66 9-62 (112)
16 2pmu_A Response regulator PHOP 39.4 64 0.0022 20.1 5.0 51 14-66 15-68 (110)
17 3rjp_A COVR; winged helix-turn 38.4 49 0.0017 19.9 4.1 50 15-66 4-56 (96)
18 1gxq_A PHOB, phosphate regulon 37.9 48 0.0017 20.4 4.1 50 14-66 12-65 (106)
19 1e0l_A Formin binding protein; 37.7 16 0.00054 19.3 1.5 19 64-82 18-36 (37)
20 3cb4_D GTP-binding protein LEP 36.9 11 0.00037 31.5 1.0 27 76-102 301-327 (599)
21 2jo6_A Nitrite reductase [NAD( 36.6 14 0.00048 23.4 1.4 16 24-39 68-83 (113)
22 2k4j_A Putative transcriptiona 32.3 56 0.0019 20.8 3.8 50 14-66 22-75 (115)
23 2zxj_A Transcriptional regulat 31.9 72 0.0025 20.7 4.4 51 14-67 17-71 (120)
24 2hwv_A DNA-binding response re 31.9 61 0.0021 20.8 4.0 51 14-66 24-77 (121)
25 1opc_A OMPR, OMPRC; transcript 30.2 67 0.0023 19.8 3.9 51 14-66 12-65 (110)
26 2hqn_A Putative transcriptiona 30.0 69 0.0024 19.7 3.9 51 14-66 10-63 (109)
27 3tr5_A RF-3, peptide chain rel 29.6 23 0.00078 28.8 1.8 26 76-102 402-427 (528)
28 3zq7_A KDP operon transcriptio 28.3 67 0.0023 19.5 3.6 50 14-66 9-62 (102)
29 4aiv_A Probable nitrite reduct 27.8 21 0.00073 23.2 1.1 14 26-39 73-86 (119)
30 3c0d_A Putative nitrite reduct 26.9 24 0.00083 22.6 1.3 15 25-39 67-81 (119)
31 2ysi_A Transcription elongatio 26.0 33 0.0011 18.4 1.5 17 64-80 22-38 (40)
32 3q9v_A DNA-binding response re 25.9 87 0.003 20.5 4.0 51 14-66 41-94 (133)
33 2qpz_A Naphthalene 1,2-dioxyge 25.7 21 0.00071 22.1 0.8 14 26-39 60-73 (103)
34 2pcr_A Inositol-1-monophosphat 25.5 8.7 0.0003 28.2 -1.3 25 15-39 82-106 (264)
35 2i7f_A Ferredoxin component of 25.2 22 0.00074 22.3 0.8 14 26-39 61-74 (108)
36 1e0n_A Hypothetical protein; Y 24.5 24 0.00082 17.6 0.7 10 64-73 12-21 (27)
37 1lbv_A Fbpase/impase, fructose 24.5 9.8 0.00034 27.7 -1.1 25 15-39 78-102 (252)
38 1g0h_A Inositol monophosphatas 24.4 9.9 0.00034 27.7 -1.1 25 15-39 77-101 (252)
39 2p3n_A Inositol-1-monophosphat 24.3 9.4 0.00032 27.9 -1.3 25 15-39 75-99 (256)
40 3oou_A LIN2118 protein; protei 24.2 44 0.0015 20.5 2.1 23 37-60 84-106 (108)
41 2z9m_A Response regulator YYCF 24.1 87 0.003 19.8 3.6 51 14-66 17-70 (120)
42 1fqt_A Rieske-type ferredoxin 24.0 23 0.0008 22.3 0.8 14 26-39 63-76 (112)
43 3lv0_A Extragenic suppressor p 23.9 10 0.00035 28.0 -1.1 25 15-39 86-110 (267)
44 2jza_A Nitrite reductase [NAD( 23.6 30 0.001 22.6 1.3 15 25-39 66-80 (130)
45 3b8b_A CYSQ, sulfite synthesis 23.0 11 0.00038 28.1 -1.1 25 15-39 101-125 (292)
46 3gwn_A Probable FAD-linked sul 22.9 30 0.001 22.6 1.2 47 51-100 3-51 (114)
47 2qfl_A Inositol-1-monophosphat 22.5 11 0.00037 27.6 -1.3 24 15-38 80-103 (267)
48 3dqy_A Toluene 1,2-dioxygenase 22.3 26 0.00091 21.8 0.8 14 26-39 58-71 (106)
49 2bji_A Inositol-1(OR 4)-monoph 21.8 11 0.00039 27.6 -1.3 24 15-38 86-109 (277)
50 3gbg_A TCP pilus virulence reg 21.6 48 0.0016 23.4 2.1 27 34-61 243-270 (276)
51 1vm9_A Toluene-4-monooxygenase 21.3 34 0.0011 21.4 1.1 14 26-39 60-73 (111)
52 2q74_A Inositol-1-monophosphat 21.0 12 0.00042 28.0 -1.3 25 15-39 100-124 (299)
53 3ryd_A Inositol monophosphatas 20.8 12 0.0004 28.1 -1.4 25 15-39 92-116 (273)
54 3d89_A Rieske domain-containin 20.4 35 0.0012 22.9 1.1 15 25-39 76-90 (157)
55 1vdw_A Hypothetical protein PH 20.2 14 0.00046 27.0 -1.1 24 15-38 80-103 (254)
56 3t0j_A Impase II, inositol mon 20.2 12 0.00042 28.2 -1.4 25 15-39 87-111 (283)
57 1xi6_A Extragenic suppressor; 20.0 13 0.00044 27.4 -1.3 25 15-39 88-112 (262)
No 1
>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A*
Probab=99.33 E-value=1.3e-12 Score=112.99 Aligned_cols=76 Identities=30% Similarity=0.488 Sum_probs=64.1
Q ss_pred ccccccccccCC-CceeeecCCCceEeeecccceeeeHHHHHHHHHhhCCCCCHHHHHHhhhccceecCCCcccccCC
Q psy15097 2 LASQFDLYSGEE-DYKYLSPILGNVCFASTQYAMCFTLHSFASLYAQTSPTLNTQEFARRLWGDMYFNSKTKIVEPVN 78 (106)
Q Consensus 2 ~n~ii~~~~~~~-~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y~~k~~~~~~~~l~k~LWGd~Y~~~ktkk~~p~~ 78 (106)
+|..+++|.+.. +++.++|..++|.|+||++||+||+++||++|++++ +++.+.+.+++|||+||+++++++....
T Consensus 185 i~~~l~~~~~~~~~~~~~~p~~~~v~~~sa~~g~~~~~~~f~~~y~~~~-~~~~~~l~~~~~~d~~~~~~~~~~~~~~ 261 (842)
T 1n0u_A 185 VNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKF-GVDKAKMMDRLWGDSFFNPKTKKWTNKD 261 (842)
T ss_dssp HHHHHHHHSCGGGCCCCCCGGGTCEEEEETTTTEEEEHHHHHHHHHTTT-TSCHHHHHHHTSSSCEEETTTTEEESCS
T ss_pred HHHHHhhccccccCceeeceEEeeeEEeecccccccchhhhhhhcchhc-CCCHHHHHHHHhccccccCCCCeEEEec
Confidence 344555554432 456789999999999999999999999999999999 7999999999999999999888887543
No 2
>4fn5_A EF-G 1, elongation factor G 1; translation, translation-antibiotic compl; HET: 0UO; 2.90A {Pseudomonas aeruginosa}
Probab=93.96 E-value=0.027 Score=47.64 Aligned_cols=29 Identities=28% Similarity=0.322 Sum_probs=26.2
Q ss_pred cccCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 74 VEPVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 74 ~~p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
+.|.+++|+++|.++|+||++.||++++.
T Consensus 423 vep~~~~d~~kL~~~L~kL~~eDPsl~v~ 451 (709)
T 4fn5_A 423 VEPKTKADQEKMGIALGKLAQEDPSFRVK 451 (709)
T ss_dssp ECBSSTTTHHHHHHHHHHHHHHCTTCEEE
T ss_pred EecCCHHHhhhhHHHHHHHHHhCCeEEEE
Confidence 44778999999999999999999999875
No 3
>1n0u_A EF-2, elongation factor 2; G-protein, CIS-proline, translation; HET: SO1; 2.12A {Saccharomyces cerevisiae} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1n0v_C 1s1h_T 2e1r_A* 2npf_A* 2p8w_T* 3dny_T 3b82_A* 1zm2_A* 1zm3_A* 1zm4_A* 1zm9_A* 2p8x_T* 2p8y_T* 2p8z_T* 2zit_A* 1u2r_A* 3b78_A* 3b8h_A*
Probab=88.19 E-value=0.18 Score=43.63 Aligned_cols=30 Identities=37% Similarity=0.655 Sum_probs=26.8
Q ss_pred cccCCCCCCchHHHHHHHHHhhCCceeEEe
Q psy15097 74 VEPVNPSELPKMLDGLRKVNKSYPLLTLLQ 103 (106)
Q Consensus 74 ~~p~~p~dlpkl~e~L~~l~~~~~~~~~~~ 103 (106)
+.|++++|.++|.++|+||++.||++++..
T Consensus 493 vep~~~~d~~kl~~~L~kL~~eDp~l~v~~ 522 (842)
T 1n0u_A 493 VEVKNANDLPKLVEGLKRLSKSDPCVLTYM 522 (842)
T ss_dssp EEESSGGGHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEECCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 457889999999999999999999998853
No 4
>2rdo_7 EF-G, elongation factor G; elongation factor G, EF-G, RRF, GDPNP, 50S subunit, cryo-EM, REAL-space refinement, ribonucleoprotein; 9.10A {Escherichia coli} PDB: 3j0e_H
Probab=87.87 E-value=0.19 Score=42.55 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=24.8
Q ss_pred cCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 76 PVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 76 p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
|.+++|.++|.++|+||++.||++++.
T Consensus 422 p~~~~d~~kl~~~L~~L~~eDp~l~v~ 448 (704)
T 2rdo_7 422 PKTKADQEKMGLALGRLAKEDPSFRVW 448 (704)
T ss_pred ECChHHHHHHHHHHHHHHhhCCEEEEE
Confidence 568889999999999999999999875
No 5
>2xex_A Elongation factor G; GTPase, translation, biosynthetic protein; 1.90A {Staphylococcus aureus}
Probab=87.68 E-value=0.12 Score=43.69 Aligned_cols=27 Identities=22% Similarity=0.329 Sum_probs=24.7
Q ss_pred cCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 76 PVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 76 p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
|.+++|.++|.++|++|++.||++++.
T Consensus 414 p~~~~d~~kl~~~L~~l~~eDp~l~~~ 440 (693)
T 2xex_A 414 PKSKADQDKMTQALVKLQEEDPTFHAH 440 (693)
T ss_dssp ESSHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred eCCchhHHHHHHHHHHHHhhCCeEEEE
Confidence 567889999999999999999999875
No 6
>3j25_A Tetracycline resistance protein TETM; antibiotic resistance, translation; HET: GCP; 7.20A {Enterococcus faecalis}
Probab=85.82 E-value=0.12 Score=43.14 Aligned_cols=29 Identities=38% Similarity=0.622 Sum_probs=25.3
Q ss_pred cccCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 74 VEPVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 74 ~~p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
+.|.+++|.++|.++|++|++.||++++.
T Consensus 349 iep~~~~d~~kL~~aL~kL~~eDPsl~v~ 377 (638)
T 3j25_A 349 VEPSKPEQREMLLDALLEISDSDPLLRYY 377 (638)
T ss_dssp EECCSHHHHHHHHHHHHHHHHTCTTCCCC
T ss_pred eccCChHHHHHHHHHHHHHhhcCCeeEEE
Confidence 34668889999999999999999998864
No 7
>1dar_A EF-G, elongation factor G; ribosomal translocase, translational GTPase; HET: GDP; 2.40A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 PDB: 1elo_A 1ktv_A 2om7_L* 2wri_Y* 2wrk_Y* 2xsy_Y* 2xuy_Y* 2j7k_A* 2efg_A* 1jqm_B 1efg_A* 1fnm_A* 1pn6_A 2bm1_A* 2bm0_A* 2bv3_A* 3izp_E 1zn0_B 1jqs_C 2bcw_C ...
Probab=85.69 E-value=0.19 Score=42.41 Aligned_cols=29 Identities=17% Similarity=0.386 Sum_probs=8.1
Q ss_pred cccCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 74 VEPVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 74 ~~p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
+.|.+++|.++|.++|+||++.||++++.
T Consensus 413 i~p~~~~d~~kl~~~L~~l~~eDp~l~v~ 441 (691)
T 1dar_A 413 IEPKTKADQEKLSQALARLAEEDPTFRVS 441 (691)
T ss_dssp --------------------CCCCSCEEE
T ss_pred EEECCchhHHHHHHHHHHHHhhCCeEEEE
Confidence 34668899999999999999999999875
No 8
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A*
Probab=80.36 E-value=0.41 Score=40.21 Aligned_cols=28 Identities=25% Similarity=0.381 Sum_probs=24.9
Q ss_pred ccCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 75 EPVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 75 ~p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
.|.+++|.++|.++|+||++.||++++.
T Consensus 388 ~p~~~~d~~kl~~~L~~l~~edp~l~v~ 415 (665)
T 2dy1_A 388 HPKGRTDEARLGEALRKLLEEDPSLKLE 415 (665)
T ss_dssp EESSHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EECChhhHHHHHHHHHHHHHhCCeEEEE
Confidence 3567889999999999999999999875
No 9
>2h5e_A Peptide chain release factor RF-3; beta barrel, translation; HET: GDP; 2.80A {Escherichia coli} PDB: 2o0f_A 3sfs_W* 3zvo_Y* 3uoq_W*
Probab=69.05 E-value=3.1 Score=33.99 Aligned_cols=26 Identities=15% Similarity=0.355 Sum_probs=19.9
Q ss_pred cCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 76 PVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 76 p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
|.++.|.++|.++|.||+.-|| +++.
T Consensus 403 ~~~~~d~~kl~~~L~~L~~ed~-~~~~ 428 (529)
T 2h5e_A 403 LKDPLKQKQLLKGLVQLSEEGA-VQVF 428 (529)
T ss_dssp ESCC---CTHHHHHHHHHHTTS-CEEE
T ss_pred ECChHHHHHHHHHHHHHHhhCC-EEEE
Confidence 5689999999999999999998 5664
No 10
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=57.81 E-value=4.3 Score=33.28 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=23.2
Q ss_pred cccCCCCCCchHHHHHHHHHhhCCceeE
Q psy15097 74 VEPVNPSELPKMLDGLRKVNKSYPLLTL 101 (106)
Q Consensus 74 ~~p~~p~dlpkl~e~L~~l~~~~~~~~~ 101 (106)
+.|++++|.++|.++|+||++.||...+
T Consensus 419 v~p~~~~d~~kl~~~L~~L~eed~~~v~ 446 (548)
T 3vqt_A 419 VRLKNPLKAKQLQKGLEQLAEEGAVQLF 446 (548)
T ss_dssp EEESCGGGHHHHHHHHHHHHHTTSSEEE
T ss_pred eeeCCchhHHHHHHHHHHhhhcCceeEE
Confidence 3466889999999999999999986443
No 11
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.41 E-value=6.8 Score=24.59 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=20.4
Q ss_pred cceecCCCcccccCCCCCCchHHHHHHHHH
Q psy15097 64 DMYFNSKTKIVEPVNPSELPKMLDGLRKVN 93 (106)
Q Consensus 64 d~Y~~~ktkk~~p~~p~dlpkl~e~L~~l~ 93 (106)
-||||+.||.=.=..|.||....|.-+.|+
T Consensus 32 ~fyyN~~Tk~S~WekP~eLk~~~e~dr~l~ 61 (73)
T 2dk7_A 32 VFFYNPTTRLSMWDRPDDLIGRADVDKIIQ 61 (73)
T ss_dssp EEEEETTTTEECSSCCTTTTTCSHHHHHHH
T ss_pred EEEecCcccceeccCChHhcCHHHHHHHHh
Confidence 478999998655567888887654434343
No 12
>2ywe_A GTP-binding protein LEPA; G domain, beta-barrel, ferredoxin-like domain, structural GE NPPSFA; 2.05A {Aquifex aeolicus} PDB: 2ywf_A* 2ywg_A* 2ywh_A*
Probab=50.62 E-value=7.1 Score=32.65 Aligned_cols=27 Identities=15% Similarity=0.213 Sum_probs=24.3
Q ss_pred cCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 76 PVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 76 p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
|.+++|.++|.++|.+|..-||.+++.
T Consensus 303 p~~~~d~~~l~~aL~kL~~eD~sl~~~ 329 (600)
T 2ywe_A 303 PAEDTTYEELRDALEKYAINDAAIVYE 329 (600)
T ss_dssp ECTTCCHHHHHHHHHHHHTTCSSCEEE
T ss_pred ccccccHHHHHHHHHHHhhhCCEEEEE
Confidence 567889999999999999999998874
No 13
>3rnv_A HC-Pro, helper component proteinase; cysteine protease, proteolysis, hydrolase; 2.00A {Turnip mosaic virus}
Probab=46.58 E-value=7 Score=27.90 Aligned_cols=58 Identities=16% Similarity=0.327 Sum_probs=36.6
Q ss_pred cccceeeeHHHHHHHHHhhCCCCCHHHHHHhhhccceecCCCcccccCCCCCCchHHH---HHHHHHhhCCce
Q psy15097 30 TQYAMCFTLHSFASLYAQTSPTLNTQEFARRLWGDMYFNSKTKIVEPVNPSELPKMLD---GLRKVNKSYPLL 99 (106)
Q Consensus 30 al~gw~Ftl~sFA~~Y~~k~~~~~~~~l~k~LWGd~Y~~~ktkk~~p~~p~dlpkl~e---~L~~l~~~~~~~ 99 (106)
++.|.|+ +..|+.|+..-- .-+.+.|.|.+ +........++|+|++ ++.+|+.-||.+
T Consensus 39 ak~GYCY-inIFlaMl~nV~-e~~ak~Ftk~V----------rd~~v~~LG~WPt~~dvatac~~l~~~~P~~ 99 (158)
T 3rnv_A 39 AKEGYCY-INIFLAMLVNVK-ESQAKEFTKVV----------RDKLVGELGKWPTLLDVATACYFLKVFYPDV 99 (158)
T ss_dssp CCTTCTT-HHHHHHHGGGSC-GGGHHHHHHHH----------HHTHHHHHCSSCBHHHHHHHHHHHHHHSGGG
T ss_pred eeCCcHH-HHHHHHHHccCC-HHHHHHHHHHH----------HHHHHHHhCCCCCHHHHHHHHHHHHHhCccc
Confidence 4678887 577888877421 11222333321 1223456889999998 788899888854
No 14
>3e3x_A BIPA; MCSG,PSI2, structural genomics, protein struct initiative, midwest center for structural genomics, GTP-BIN nucleotide-binding; HET: MLZ MLY; 1.95A {Vibrio parahaemolyticus}
Probab=42.46 E-value=22 Score=27.88 Aligned_cols=21 Identities=24% Similarity=0.161 Sum_probs=18.8
Q ss_pred chHHHHHHHHHhhCCceeEEe
Q psy15097 83 PKMLDGLRKVNKSYPLLTLLQ 103 (106)
Q Consensus 83 pkl~e~L~~l~~~~~~~~~~~ 103 (106)
.+|.++|.+|..-||++++..
T Consensus 56 ~kL~~aL~kl~~eDpsL~v~~ 76 (332)
T 3e3x_A 56 RNILERLEKELVHNVALRVEQ 76 (332)
T ss_dssp HHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHhccCCEEEEEE
Confidence 499999999999999998753
No 15
>2jzy_A Transcriptional regulatory protein PCOR; two-component-system response regulator, effector domain, DNA-binding, phosphoprotein, plasmid; NMR {Klebsiella pneumoniae}
Probab=42.22 E-value=53 Score=20.63 Aligned_cols=51 Identities=12% Similarity=0.107 Sum_probs=33.4
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHH--HhhCC-CCCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLY--AQTSP-TLNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y--~~k~~-~~~~~~l~k~LWGd~Y 66 (106)
+++.++|....|.... .-..+|-+.|+=+. +..-+ -++.+.|...+||+.+
T Consensus 9 g~~~~d~~~~~l~~~g--~~i~Lt~~E~~lL~~L~~~~g~vvsre~L~~~vW~~~~ 62 (112)
T 2jzy_A 9 ADMTVDMVRRTVIRSG--KKIHLTGKEYVLLELLLQRTGEVLPRSLISSLVWNMNF 62 (112)
T ss_dssp TTEEECTTTCCEEETT--EECCCCHHHHHHHHHHHHTTTSCBCHHHHHHHHTCCCS
T ss_pred CCEEEECCCCEEEECC--EEEecCHHHHHHHHHHHHCCCceEcHHHHHHHhcCCCC
Confidence 4688899888886643 22446666665432 22221 2789999999999864
No 16
>2pmu_A Response regulator PHOP; winged helix-TUN-HELX, transcription regulation; 1.78A {Mycobacterium tuberculosis}
Probab=39.45 E-value=64 Score=20.07 Aligned_cols=51 Identities=14% Similarity=0.137 Sum_probs=33.5
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHHH--hhCC-CCCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLYA--QTSP-TLNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y~--~k~~-~~~~~~l~k~LWGd~Y 66 (106)
+++.+++....|..... -..+|-+.|.-+.. ..-+ -++.+.|...+||+.+
T Consensus 15 g~~~~d~~~~~l~~~g~--~i~Lt~~E~~lL~~L~~~~g~~vsr~~L~~~vW~~~~ 68 (110)
T 2pmu_A 15 ADIELDEETHEVWKAGQ--PVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDF 68 (110)
T ss_dssp TTEEEETTTCCEEETTE--EECCCHHHHHHHHHHHHTTTSCBCHHHHHHHHSCTTC
T ss_pred CCEEEECCCCEEEECCE--EEecCHHHHHHHHHHHHCCCEEEcHHHHHHHHcCCCC
Confidence 46888998888865422 24467666654332 2221 2789999999999864
No 17
>3rjp_A COVR; winged helix-turn-helix, DNA binding, DNA binding protein; 1.50A {Streptococcus pyogenes}
Probab=38.39 E-value=49 Score=19.91 Aligned_cols=50 Identities=14% Similarity=0.161 Sum_probs=30.5
Q ss_pred ceeeecCCCceEeeecccceeeeHHHHHHH--HHhhCC-CCCHHHHHHhhhccce
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLHSFASL--YAQTSP-TLNTQEFARRLWGDMY 66 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~--Y~~k~~-~~~~~~l~k~LWGd~Y 66 (106)
++.++|....|.... .-...|-..|.=+ .+..-+ -++.++|...+||+.+
T Consensus 4 ~~~~d~~~~~l~~~~--~~i~Lt~~E~~lL~~L~~~~g~~vsr~~L~~~vw~~~~ 56 (96)
T 3rjp_A 4 DLVLNPQNRSVNRGD--DEISLTKREYDLLNILMTNMNRVMTREELLSNVWKYDE 56 (96)
T ss_dssp SSEEETTTTEEEETT--EEEECCHHHHHHHHHHHHTTTSCBCHHHHHHHHSSSCS
T ss_pred CEEEECCCCEEEECC--EEEEcCHHHHHHHHHHHhCCCeeEcHHHHHHHHcCCCC
Confidence 467888877775432 2234565555542 223221 2789999999999643
No 18
>1gxq_A PHOB, phosphate regulon transcriptional regulatory protein; transcriptional activator, helix-winged-helix, sensory transduction; 2.0A {Escherichia coli} SCOP: a.4.6.1 PDB: 1gxp_A 1qqi_A 2z33_A 3t72_A
Probab=37.86 E-value=48 Score=20.42 Aligned_cols=50 Identities=14% Similarity=0.180 Sum_probs=33.1
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHHH--hhCCC--CCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLYA--QTSPT--LNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y~--~k~~~--~~~~~l~k~LWGd~Y 66 (106)
+++.+++....|...- .-...|-..|.-+.. ..- | ++.+.|...+||+.+
T Consensus 12 g~~~~d~~~~~l~~~g--~~i~Lt~~E~~lL~~L~~~~-g~vvsr~~L~~~vW~~~~ 65 (106)
T 1gxq_A 12 QGLSLDPTSHRVMAGE--EPLEMGPTEFKLLHFFMTHP-ERVYSREQLLNHVWGTNV 65 (106)
T ss_dssp TTEEEETTTTEEEETT--EECCCCHHHHHHHHHHHHSC-SSEECHHHHHHHHTCSSS
T ss_pred CCEEEECCCCEEEECC--EEEEcCHHHHHHHHHHHHCC-CeeEcHHHHHHHHcCCCC
Confidence 4688899888876532 224456666654332 222 3 789999999999854
No 19
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=37.66 E-value=16 Score=19.31 Aligned_cols=19 Identities=32% Similarity=0.457 Sum_probs=12.5
Q ss_pred cceecCCCcccccCCCCCC
Q psy15097 64 DMYFNSKTKIVEPVNPSEL 82 (106)
Q Consensus 64 d~Y~~~ktkk~~p~~p~dl 82 (106)
.+|||.+|+.-+=..|.|+
T Consensus 18 ~YYyN~~T~es~We~P~~~ 36 (37)
T 1e0l_A 18 TYYYNNRTLESTWEKPQEL 36 (37)
T ss_dssp EEEEETTTTEEESSCCSSC
T ss_pred EEEEECCCCCEEecCCCcc
Confidence 5789998886554445544
No 20
>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane, nucleotide-binding, translation; 2.80A {Escherichia coli} PDB: 3deg_C*
Probab=36.87 E-value=11 Score=31.48 Aligned_cols=27 Identities=22% Similarity=0.265 Sum_probs=23.1
Q ss_pred cCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 76 PVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 76 p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
|.+..|.++|.++|.+|...||++++-
T Consensus 301 p~~~~d~~~l~~aL~kL~~eD~sl~~~ 327 (599)
T 3cb4_D 301 PVSSDDYEAFRDALGKLSLNDASLFYE 327 (599)
T ss_dssp ESSGGGHHHHHHHHHHHHTTCSSCEEE
T ss_pred ecCccCHHHHHHHHHHHHhhCcEEEEE
Confidence 446677889999999999999999864
No 21
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=36.58 E-value=14 Score=23.39 Aligned_cols=16 Identities=25% Similarity=0.206 Sum_probs=13.3
Q ss_pred ceEeeecccceeeeHH
Q psy15097 24 NVCFASTQYAMCFTLH 39 (106)
Q Consensus 24 NV~FaSal~gw~Ftl~ 39 (106)
.-.+.+..|||.|+++
T Consensus 68 ~~~i~CP~Hg~~Fd~~ 83 (113)
T 2jo6_A 68 ELWVASPLKKQRFRLS 83 (113)
T ss_dssp EEEEEETTTTEEEETT
T ss_pred CcEEECCCCCCEEeCC
Confidence 3378899999999984
No 22
>2k4j_A Putative transcriptional regulator; response regulator, acid resistance, DN binding, phosphoprotein, transcription regul; NMR {Helicobacter pylori}
Probab=32.29 E-value=56 Score=20.76 Aligned_cols=50 Identities=8% Similarity=-0.052 Sum_probs=32.8
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHH--HhhCCC--CCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLY--AQTSPT--LNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y--~~k~~~--~~~~~l~k~LWGd~Y 66 (106)
+++.++|....|..... -..+|-+.|.-+. +..- | ++.+.|...+||+.+
T Consensus 22 g~l~ld~~~~~l~~~g~--~i~Lt~~E~~LL~~L~~~~-g~vvsre~L~~~vW~~~~ 75 (115)
T 2k4j_A 22 NIFRVDKDSREVYMHEK--KLDLTRAEYEILSLLISKK-GYVFSRESIAIESESINP 75 (115)
T ss_dssp TTEEEETTTTEEEETTE--EECSCHHHHHHHHHHHHHC-CCEECHHHHHHHTCCSSC
T ss_pred CCEEEECCCCEEEECCE--EEecCHHHHHHHHHHHHcC-CcEEcHHHHHHHHcCCCC
Confidence 46788988887765432 2446666665432 2322 3 789999999999854
No 23
>2zxj_A Transcriptional regulatory protein WALR; two-component system, YYCG, response regulator, helix-turn-H motif, DNA-binding domain; 1.87A {Staphylococcus aureus} PDB: 2d1v_A
Probab=31.95 E-value=72 Score=20.74 Aligned_cols=51 Identities=14% Similarity=0.230 Sum_probs=34.1
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHH--HhhCCC--CCHHHHHHhhhcccee
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLY--AQTSPT--LNTQEFARRLWGDMYF 67 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y--~~k~~~--~~~~~l~k~LWGd~Y~ 67 (106)
+++.++|....|...- .-...|-..|.=+. +..- | ++.+.|...+||+.+.
T Consensus 17 g~l~ld~~~~~v~~~g--~~i~Lt~~E~~lL~~L~~~~-g~vvsre~L~~~vWg~~~~ 71 (120)
T 2zxj_A 17 KDIVIYPDAYSIKKRG--EDIELTHREFELFHYLSKHM-GQVMTREHLLQTVWGYDYF 71 (120)
T ss_dssp TTEEEEGGGTEEEETT--EEECCCHHHHHHHHHHHTTT-TCCBCHHHHHHHHHCTTCC
T ss_pred cCEEEECCCCEEEECC--EEEEcCHHHHHHHHHHHhCC-CceEcHHHHHHHhcCCCCC
Confidence 4688899888876532 22446667776543 3332 3 7889999999997654
No 24
>2hwv_A DNA-binding response regulator VICR; essential response regulator, C-terminal domain, DNA-binding transcription; 1.90A {Enterococcus faecalis}
Probab=31.87 E-value=61 Score=20.78 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=33.0
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHHH--hhCC-CCCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLYA--QTSP-TLNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y~--~k~~-~~~~~~l~k~LWGd~Y 66 (106)
+++.+++....|...- .-..+|-+.|.-+.. ..-+ -++.++|...+||+.+
T Consensus 24 g~~~ld~~~~~l~~~g--~~i~Lt~~E~~LL~~L~~~~g~vvsre~L~~~vW~~~~ 77 (121)
T 2hwv_A 24 GDLTIHPDAYMVSKRG--EKIELTHREFELLYYLAKHIGQVMTREHLLQTVWGYDY 77 (121)
T ss_dssp TTEEECSSSSEEEETT--EEEECCHHHHHHHHHHHHTTTCCBCHHHHHHHHTCGGG
T ss_pred CCEEEECCCCEEEECC--EEEECCHHHHHHHHHHHHcCCeEEcHHHHHHHHcCCCC
Confidence 4678888888776542 224566666654322 2221 2789999999999864
No 25
>1opc_A OMPR, OMPRC; transcription regulation, response regulator, winged helix, osmoregulation; 1.95A {Escherichia coli} SCOP: a.4.6.1 PDB: 1odd_A 2jpb_A
Probab=30.19 E-value=67 Score=19.84 Aligned_cols=51 Identities=18% Similarity=0.086 Sum_probs=32.5
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHH--HhhCC-CCCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLY--AQTSP-TLNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y--~~k~~-~~~~~~l~k~LWGd~Y 66 (106)
+++.+++....|.... .-...|-+.|.-+. ...-+ -++.++|...+||+.+
T Consensus 12 g~~~ld~~~~~l~~~~--~~i~Lt~~E~~lL~~L~~~~g~~vsr~~L~~~vW~~~~ 65 (110)
T 1opc_A 12 GKFKLNLGTREMFRED--EPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREY 65 (110)
T ss_dssp TTEEEETTTTEEEETT--EEECCCHHHHHHHHHHHHSTTCCEEHHHHHHHHCCSSS
T ss_pred CCEEEECCCCEEEECC--EEEEcCHHHHHHHHHHHHcCCceEcHHHHHHHHcCCCC
Confidence 4678888888776532 22446666665432 22221 2778999999999864
No 26
>2hqn_A Putative transcriptional regulator; phosporylation-independent response regulator, signaling Pro; NMR {Helicobacter pylori}
Probab=30.02 E-value=69 Score=19.73 Aligned_cols=51 Identities=10% Similarity=0.173 Sum_probs=30.8
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHH--HHHhhCC-CCCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFAS--LYAQTSP-TLNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~--~Y~~k~~-~~~~~~l~k~LWGd~Y 66 (106)
+++.++|....|...- .-..+|-..|.= +....-+ -++.+.|...+||+.+
T Consensus 10 g~~~~d~~~~~l~~~g--~~i~Lt~~E~~lL~~L~~~~g~~vsr~~L~~~vW~~~~ 63 (109)
T 2hqn_A 10 GDLTISPDEEKIIYKG--REVEVKGKPFEVLTHLARHRDQIVSKEQLLDAIWEEPE 63 (109)
T ss_dssp TTEEEETTTTEEEETT--EEEECCCSTHHHHHHHHHHTCSEEEHHHHHHHHCCSCG
T ss_pred CCEEEECCCCEEEECC--EEEEcCHHHHHHHHHHHHCCCeeEcHHHHHHHHcCCCC
Confidence 4578888887776532 123345444443 2233321 2788999999999854
No 27
>3tr5_A RF-3, peptide chain release factor 3; protein synthesis, translation; HET: GDP; 2.11A {Coxiella burnetii}
Probab=29.62 E-value=23 Score=28.85 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=22.3
Q ss_pred cCCCCCCchHHHHHHHHHhhCCceeEE
Q psy15097 76 PVNPSELPKMLDGLRKVNKSYPLLTLL 102 (106)
Q Consensus 76 p~~p~dlpkl~e~L~~l~~~~~~~~~~ 102 (106)
|.+++|.++|.++|.||..-||. ++.
T Consensus 402 ~~~~~d~~kl~~aL~~L~~ED~~-~~~ 427 (528)
T 3tr5_A 402 LKDPLKQKALLKGLTQLSEEGAT-QLF 427 (528)
T ss_dssp ESCGGGHHHHHHHHHHHHHTTSC-EEE
T ss_pred ECChhHHHHHHHHHHHHHhcCCe-EEE
Confidence 45788999999999999999986 554
No 28
>3zq7_A KDP operon transcriptional regulatory protein KDP; response regulator; 2.52A {Escherichia coli}
Probab=28.31 E-value=67 Score=19.47 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=31.7
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHH--HHhhCCC--CCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASL--YAQTSPT--LNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~--Y~~k~~~--~~~~~l~k~LWGd~Y 66 (106)
+++.+++....|.... .-...|-..|.=+ ....- | ++.++|...+||+.+
T Consensus 9 g~~~~d~~~~~v~~~~--~~i~Lt~~e~~lL~~L~~~~-g~~vsr~~L~~~vw~~~~ 62 (102)
T 3zq7_A 9 SDVTVDLAARVIHRGE--EEVHLTPIEFRLLAVLLNNA-GKVLTQRQLLNQVWGPNA 62 (102)
T ss_dssp SSCEEETTTTEEEETT--EEECCCHHHHHHHHHHHHTT-TCEEEHHHHHHHHTSSSC
T ss_pred CCEEEECCCCEEEECC--EEEEcCHHHHHHHHHHHHCC-CeeECHHHHHHHhcCCCC
Confidence 4678888888775432 2244565555532 22222 3 678999999999743
No 29
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=27.83 E-value=21 Score=23.25 Aligned_cols=14 Identities=21% Similarity=0.251 Sum_probs=11.9
Q ss_pred EeeecccceeeeHH
Q psy15097 26 CFASTQYAMCFTLH 39 (106)
Q Consensus 26 ~FaSal~gw~Ftl~ 39 (106)
+..+..|||.|+|+
T Consensus 73 ~i~CP~Hg~~Fdl~ 86 (119)
T 4aiv_A 73 MVQSPILKQAFALD 86 (119)
T ss_dssp EEECTTTCCEEETT
T ss_pred EEECCCCCCEEeCC
Confidence 46788999999985
No 30
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=26.85 E-value=24 Score=22.63 Aligned_cols=15 Identities=40% Similarity=0.766 Sum_probs=13.0
Q ss_pred eEeeecccceeeeHH
Q psy15097 25 VCFASTQYAMCFTLH 39 (106)
Q Consensus 25 V~FaSal~gw~Ftl~ 39 (106)
-.+.+..|||.|+++
T Consensus 67 ~~i~CP~Hg~~Fdl~ 81 (119)
T 3c0d_A 67 MCVASPLYKQHFSLK 81 (119)
T ss_dssp EEEECTTTCCEEETT
T ss_pred eEEECCCCCCEEECC
Confidence 378899999999984
No 31
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=25.97 E-value=33 Score=18.41 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=10.8
Q ss_pred cceecCCCcccccCCCC
Q psy15097 64 DMYFNSKTKIVEPVNPS 80 (106)
Q Consensus 64 d~Y~~~ktkk~~p~~p~ 80 (106)
.||||.+|+.-+=..|.
T Consensus 22 ~YYyN~~T~eS~We~P~ 38 (40)
T 2ysi_A 22 VYYYNARTRESAWTKPD 38 (40)
T ss_dssp EEEEETTTCCEESSCCS
T ss_pred EEEEECCCCCEEeCCCC
Confidence 58899988754433343
No 32
>3q9v_A DNA-binding response regulator; response regulator protein, DNA binding protein; 1.60A {Deinococcus radiodurans}
Probab=25.85 E-value=87 Score=20.50 Aligned_cols=51 Identities=18% Similarity=0.266 Sum_probs=32.9
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHHHh-hCCC--CCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLYAQ-TSPT--LNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y~~-k~~~--~~~~~l~k~LWGd~Y 66 (106)
+++.++|....|.... .-...|-..|.=+..= ..+| ++.++|...+||+.+
T Consensus 41 g~l~ld~~~~~v~~~g--~~i~Lt~~E~~LL~~L~~~~g~vvsre~L~~~vW~~~~ 94 (133)
T 3q9v_A 41 GDLTLDPQKRLVTYKG--EELRLSPKEFDILALLIRQPGRVYSRQEIGQEIWQGRL 94 (133)
T ss_dssp TTEEEETTTTEEEETT--EECCCCHHHHHHHHHHTTSTTCEEEHHHHHHHHHTTCC
T ss_pred CCEEEECCCCEEEECC--EEEEcCHHHHHHHHHHHHCCCceEcHHHHHHHHcCCCC
Confidence 4688899888875532 2244566666654332 1123 678999999999754
No 33
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=25.65 E-value=21 Score=22.08 Aligned_cols=14 Identities=7% Similarity=-0.093 Sum_probs=11.9
Q ss_pred EeeecccceeeeHH
Q psy15097 26 CFASTQYAMCFTLH 39 (106)
Q Consensus 26 ~FaSal~gw~Ftl~ 39 (106)
.+.+..|||.|+++
T Consensus 60 ~i~Cp~Hg~~Fd~~ 73 (103)
T 2qpz_A 60 EIECPLHQGRFDVC 73 (103)
T ss_dssp EEECTTTTCEEETT
T ss_pred EEECCCCCCEEeCC
Confidence 57788999999984
No 34
>2pcr_A Inositol-1-monophosphatase; bipolar disorder, struct genomics, NPPSFA, national project on protein structural AN functional analyses; 2.60A {Aquifex aeolicus}
Probab=25.48 E-value=8.7 Score=28.22 Aligned_cols=25 Identities=8% Similarity=0.199 Sum_probs=22.3
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 82 ~WiIDPIDGT~nF~~g~p~~~vsIa 106 (264)
T 2pcr_A 82 RWFIDPLDGTKNYINGFPIFAVSVG 106 (264)
T ss_dssp EEEEEEEETHHHHHHTCSCCEEEEE
T ss_pred EEEEecccChHHHhcCCCCeEEEEE
Confidence 4789999999999999999998874
No 35
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=25.24 E-value=22 Score=22.27 Aligned_cols=14 Identities=7% Similarity=0.036 Sum_probs=11.9
Q ss_pred EeeecccceeeeHH
Q psy15097 26 CFASTQYAMCFTLH 39 (106)
Q Consensus 26 ~FaSal~gw~Ftl~ 39 (106)
.+.+..|||.|+++
T Consensus 61 ~i~Cp~Hg~~Fdl~ 74 (108)
T 2i7f_A 61 IIECPFHGGSFDIA 74 (108)
T ss_dssp EEECSSTTCEEETT
T ss_pred EEEcCCCCCEEeCC
Confidence 47788999999984
No 36
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=24.54 E-value=24 Score=17.55 Aligned_cols=10 Identities=30% Similarity=0.790 Sum_probs=7.2
Q ss_pred cceecCCCcc
Q psy15097 64 DMYFNSKTKI 73 (106)
Q Consensus 64 d~Y~~~ktkk 73 (106)
-+|||..|+.
T Consensus 12 ~YYyN~~T~~ 21 (27)
T 1e0n_A 12 PLYYNAEQKT 21 (27)
T ss_dssp EEEEETTTTE
T ss_pred eEEEECCCCC
Confidence 4788888763
No 37
>1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A*
Probab=24.53 E-value=9.8 Score=27.72 Aligned_cols=25 Identities=16% Similarity=0.186 Sum_probs=22.3
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.++-
T Consensus 78 ~WiIDPIDGT~nF~~g~p~~~vsIa 102 (252)
T 1lbv_A 78 FVALDPLDGTFNATRGIPVYSVSLC 102 (252)
T ss_dssp EEEEEEEECHHHHHTTCSCCEEEEE
T ss_pred EEEEECCCChHHHHcCCCceEEEEE
Confidence 4789999999999999999998874
No 38
>1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A*
Probab=24.36 E-value=9.9 Score=27.74 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=22.3
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 77 ~WiiDPIDGT~nF~~g~p~~~vsIa 101 (252)
T 1g0h_A 77 TVVIDPIDGSFNFINGIPFFAFCFG 101 (252)
T ss_dssp EEEEEEEECHHHHHTTCSCCEEEEE
T ss_pred EEEEeCCcChhHHhcCCCCEEEEEE
Confidence 4889999999999999999998773
No 39
>2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima} PDB: 2p3v_A*
Probab=24.26 E-value=9.4 Score=27.94 Aligned_cols=25 Identities=20% Similarity=0.312 Sum_probs=22.3
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 75 ~WiIDPIDGT~nF~~g~p~~~vsIa 99 (256)
T 2p3n_A 75 LWIIDPIDGTINFVHGLPNFSISLA 99 (256)
T ss_dssp EEEEEEEETHHHHHHTCSCCEEEEE
T ss_pred EEEEeCccCHHHHHhCCCCeEEEEE
Confidence 4789999999999999999998774
No 40
>3oou_A LIN2118 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; HET: BTB; 1.57A {Listeria innocua}
Probab=24.20 E-value=44 Score=20.48 Aligned_cols=23 Identities=4% Similarity=0.192 Sum_probs=19.6
Q ss_pred eHHHHHHHHHhhCCCCCHHHHHHh
Q psy15097 37 TLHSFASLYAQTSPTLNTQEFARR 60 (106)
Q Consensus 37 tl~sFA~~Y~~k~~~~~~~~l~k~ 60 (106)
+...|.+.+.+.+ |++|.++.+.
T Consensus 84 ~~s~F~r~Fk~~~-G~tP~~yR~~ 106 (108)
T 3oou_A 84 DMAYFYRQFKKHT-GETPNRYRKI 106 (108)
T ss_dssp CHHHHHHHHHHHH-SSCHHHHHHH
T ss_pred ChHHHHHHHHHHh-CcCHHHHHHH
Confidence 7789999999998 8999887764
No 41
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=24.09 E-value=87 Score=19.75 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=32.2
Q ss_pred CceeeecCCCceEeeecccceeeeHHHHHHHH--HhhCC-CCCHHHHHHhhhccce
Q psy15097 14 DYKYLSPILGNVCFASTQYAMCFTLHSFASLY--AQTSP-TLNTQEFARRLWGDMY 66 (106)
Q Consensus 14 ~~~~~sP~~GNV~FaSal~gw~Ftl~sFA~~Y--~~k~~-~~~~~~l~k~LWGd~Y 66 (106)
+++.+++....|...- .-...|-..|.=+. ...-+ -++.++|...+||+.+
T Consensus 17 g~~~ld~~~~~v~~~g--~~i~Lt~~E~~lL~~L~~~~g~vvsr~~L~~~vW~~~~ 70 (120)
T 2z9m_A 17 KDIVIYPDAYSIKKRG--EDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDY 70 (120)
T ss_dssp TTEEEEGGGTEEEETT--EEECCCHHHHHHHHHHHTTTTCCEEHHHHHHHHHCTTC
T ss_pred CCEEEECCCCEEEECC--EEEeCCHHHHHHHHHHHHCCCceEcHHHHHHHHhCCCC
Confidence 4688899888775532 23445666665432 22221 1678999999999643
No 42
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=23.98 E-value=23 Score=22.29 Aligned_cols=14 Identities=7% Similarity=-0.002 Sum_probs=12.2
Q ss_pred EeeecccceeeeHH
Q psy15097 26 CFASTQYAMCFTLH 39 (106)
Q Consensus 26 ~FaSal~gw~Ftl~ 39 (106)
.+.+..|||.|+++
T Consensus 63 ~i~CP~Hg~~Fd~~ 76 (112)
T 1fqt_A 63 VVECSLHMGKFCVR 76 (112)
T ss_dssp EEECTTTCCEEETT
T ss_pred EEECCCCCCEEeCC
Confidence 57788999999994
No 43
>3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} SCOP: e.7.1.0 PDB: 3luz_A
Probab=23.88 E-value=10 Score=27.99 Aligned_cols=25 Identities=12% Similarity=0.150 Sum_probs=22.5
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 86 ~WiIDPIDGT~nF~~g~p~f~vsIA 110 (267)
T 3lv0_A 86 RFIVDPLDGTTNFLHGIPFFAVSIA 110 (267)
T ss_dssp EEEEEEEECHHHHHTTCSCCEEEEE
T ss_pred EEEEecCCChHHHHhCCCceEEEEE
Confidence 4889999999999999999998873
No 44
>2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3
Probab=23.62 E-value=30 Score=22.61 Aligned_cols=15 Identities=27% Similarity=0.175 Sum_probs=13.0
Q ss_pred eEeeecccceeeeHH
Q psy15097 25 VCFASTQYAMCFTLH 39 (106)
Q Consensus 25 V~FaSal~gw~Ftl~ 39 (106)
-.+.+..|||.|+++
T Consensus 66 ~~i~CP~Hg~~Fdl~ 80 (130)
T 2jza_A 66 LWVASPLKKQHFRLY 80 (130)
T ss_dssp EEEECSSSCCEEETT
T ss_pred eEEECCCCCCEEeCC
Confidence 378899999999984
No 45
>3b8b_A CYSQ, sulfite synthesis pathway protein; 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.02 E-value=11 Score=28.15 Aligned_cols=25 Identities=12% Similarity=0.181 Sum_probs=22.3
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 101 ~WiIDPIDGT~nFv~g~p~f~VsIA 125 (292)
T 3b8b_A 101 LWIVDPLDGTKEFIKRNGEFTVNIA 125 (292)
T ss_dssp EEEEEEEECHHHHHTTCCCCEEEEE
T ss_pred EEEEecCcChhhHhcCCCCEEEEEE
Confidence 4889999999999999999998774
No 46
>3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprot oxidoreductase, virion; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus}
Probab=22.89 E-value=30 Score=22.64 Aligned_cols=47 Identities=17% Similarity=0.132 Sum_probs=30.8
Q ss_pred CCCHHHHHHhhhccceecCCCcccccCCCC--CCchHHHHHHHHHhhCCcee
Q psy15097 51 TLNTQEFARRLWGDMYFNSKTKIVEPVNPS--ELPKMLDGLRKVNKSYPLLT 100 (106)
Q Consensus 51 ~~~~~~l~k~LWGd~Y~~~ktkk~~p~~p~--dlpkl~e~L~~l~~~~~~~~ 100 (106)
|++++.+-+.+|.=... -+- -.|.+|. +...|.+.++-++..|||-.
T Consensus 3 g~~p~~~Grs~W~llHt--~aa-~~p~~pt~~~~~~~~~fi~~~~~~yPC~~ 51 (114)
T 3gwn_A 3 GLITKIWGTAGWTFNHA--VTF-GYPLNPTSDDKRRYKNYFISLGDVLPCRL 51 (114)
T ss_dssp CBCHHHHHHHHHHHHHH--HHH-TSCSSCCHHHHHHHHHHHHHHHHHCSSHH
T ss_pred CCchhhhcHHHHHHHHH--HHH-hCCCCCCHHHHHHHHHHHHHHHHHCCCHH
Confidence 68899999999963211 010 0133333 56668889999999999953
No 47
>2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli}
Probab=22.54 E-value=11 Score=27.58 Aligned_cols=24 Identities=13% Similarity=0.221 Sum_probs=22.0
Q ss_pred ceeeecCCCceEeeecccceeeeH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTL 38 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl 38 (106)
.|.++|..|+.-|..++..||.++
T Consensus 80 ~WiiDPIDGT~nf~~g~p~f~vsI 103 (267)
T 2qfl_A 80 QWVIDPLDGTTNFIKRLPHFAVSI 103 (267)
T ss_dssp EEEEEEEECHHHHHHTCSCCEEEE
T ss_pred EEEEECccCHHHHhcCCCceEEEE
Confidence 478999999999999999999887
No 48
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=22.35 E-value=26 Score=21.75 Aligned_cols=14 Identities=14% Similarity=-0.043 Sum_probs=11.8
Q ss_pred EeeecccceeeeHH
Q psy15097 26 CFASTQYAMCFTLH 39 (106)
Q Consensus 26 ~FaSal~gw~Ftl~ 39 (106)
.+.+..|||.|+|.
T Consensus 58 ~i~Cp~Hg~~Fdl~ 71 (106)
T 3dqy_A 58 IVECTLHFGKFCVR 71 (106)
T ss_dssp EEECTTTCCEEETT
T ss_pred EEECCCCCCEEeCC
Confidence 47788999999984
No 49
>2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A
Probab=21.75 E-value=11 Score=27.64 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=22.1
Q ss_pred ceeeecCCCceEeeecccceeeeH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTL 38 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl 38 (106)
.|.++|..|+.-|..++..||.+|
T Consensus 86 ~WiiDPIDGT~nF~~g~p~~~vsI 109 (277)
T 2bji_A 86 TWIIDPIDGTTNFVHGFPFVAVSI 109 (277)
T ss_dssp EEEEEEEECHHHHHHTCSCCEEEE
T ss_pred EEEEeCCcCHHHHHcCCCCeEEEE
Confidence 488999999999999999999887
No 50
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=21.57 E-value=48 Score=23.41 Aligned_cols=27 Identities=19% Similarity=0.385 Sum_probs=22.5
Q ss_pred eee-eHHHHHHHHHhhCCCCCHHHHHHhh
Q psy15097 34 MCF-TLHSFASLYAQTSPTLNTQEFARRL 61 (106)
Q Consensus 34 w~F-tl~sFA~~Y~~k~~~~~~~~l~k~L 61 (106)
++| +...|.+.+.+.+ |++|.++.+++
T Consensus 243 ~Gf~~~s~F~r~Fkk~~-G~tP~~yR~~~ 270 (276)
T 3gbg_A 243 SGFASVSYFSTVFKSTM-NVAPSEYLFML 270 (276)
T ss_dssp TTCSCHHHHHHHHHHHH-SSCHHHHHHHT
T ss_pred hCCCCHHHHHHHHHHHH-CcCHHHHHHHH
Confidence 445 6789999999999 89999988764
No 51
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=21.33 E-value=34 Score=21.44 Aligned_cols=14 Identities=7% Similarity=-0.033 Sum_probs=12.2
Q ss_pred EeeecccceeeeHH
Q psy15097 26 CFASTQYAMCFTLH 39 (106)
Q Consensus 26 ~FaSal~gw~Ftl~ 39 (106)
.+.+..|||.|++.
T Consensus 60 ~i~Cp~Hg~~Fd~~ 73 (111)
T 1vm9_A 60 VITCRAHLWTFNDG 73 (111)
T ss_dssp EEECTTTCCEEETT
T ss_pred EEEcCCCCCEEeCC
Confidence 57788999999996
No 52
>2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis}
Probab=20.97 E-value=12 Score=28.05 Aligned_cols=25 Identities=28% Similarity=0.256 Sum_probs=22.1
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 100 ~WiIDPIDGT~nFv~g~p~f~vsIa 124 (299)
T 2q74_A 100 TWVLDPIDGTVNFVYGIPAYAVSIG 124 (299)
T ss_dssp EEEEEEEECHHHHHHTCSCCEEEEE
T ss_pred EEEEecccChHHHhcCCCCEEEEEE
Confidence 4789999999999999999998763
No 53
>3ryd_A Inositol monophosphatase family protein; impase fold, FIG superfamily protein, hydrolase; HET: SRT; 2.37A {Staphylococcus aureus} PDB: 3qmf_A
Probab=20.76 E-value=12 Score=28.11 Aligned_cols=25 Identities=24% Similarity=0.387 Sum_probs=22.5
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 92 ~WiIDPIDGT~nFv~g~p~f~vsIA 116 (273)
T 3ryd_A 92 LWIMDPIDGTANLVKQQEDYCIILA 116 (273)
T ss_dssp EEEEEEEECHHHHHHHSCSCEEEEE
T ss_pred EEEEecccCHHHHHhCCCCeEEEEE
Confidence 4789999999999999999998874
No 54
>3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus}
Probab=20.40 E-value=35 Score=22.90 Aligned_cols=15 Identities=20% Similarity=0.228 Sum_probs=12.7
Q ss_pred eEeeecccceeeeHH
Q psy15097 25 VCFASTQYAMCFTLH 39 (106)
Q Consensus 25 V~FaSal~gw~Ftl~ 39 (106)
=.+.+..|||.|+++
T Consensus 76 ~~i~CP~Hgw~Fdl~ 90 (157)
T 3d89_A 76 SCIVCPWHKYKITLA 90 (157)
T ss_dssp EEEECTTTCCEEETT
T ss_pred CEEECCCCCCEEecC
Confidence 368899999999983
No 55
>1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1
Probab=20.21 E-value=14 Score=26.98 Aligned_cols=24 Identities=13% Similarity=0.180 Sum_probs=22.0
Q ss_pred ceeeecCCCceEeeecccceeeeH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTL 38 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl 38 (106)
.|.++|..|+.-|..++..||.++
T Consensus 80 ~WiiDPIDGT~nF~~g~p~f~vsi 103 (254)
T 1vdw_A 80 TVVVDPLDGSYNFINGIPFFAVSV 103 (254)
T ss_dssp EEEEEEEECHHHHHTTCSCCEEEE
T ss_pred EEEEeCCcChHHHhcCCCcEEEEE
Confidence 488999999999999999999887
No 56
>3t0j_A Impase II, inositol monophosphatase family protein; FIG superfamily, hydrolase; HET: PG4; 2.59A {Staphylococcus aureus}
Probab=20.18 E-value=12 Score=28.18 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=22.4
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.+|-
T Consensus 87 ~WiIDPIDGT~nFi~g~p~f~VsIA 111 (283)
T 3t0j_A 87 VWVVDPIDGTLNFVHQQENFAISIG 111 (283)
T ss_dssp EEEEEEEECHHHHHHHSCSCEEEEE
T ss_pred EEEEeccCChHHHHcCCCceEEEEE
Confidence 4789999999999999999998873
No 57
>1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1
Probab=20.04 E-value=13 Score=27.35 Aligned_cols=25 Identities=16% Similarity=0.224 Sum_probs=22.0
Q ss_pred ceeeecCCCceEeeecccceeeeHH
Q psy15097 15 YKYLSPILGNVCFASTQYAMCFTLH 39 (106)
Q Consensus 15 ~~~~sP~~GNV~FaSal~gw~Ftl~ 39 (106)
.|.++|..|+.-|..++..||.++-
T Consensus 88 ~WiiDPIDGT~nF~~g~p~~~vsIa 112 (262)
T 1xi6_A 88 TVIVDPLDGSYNFIAGIPFFALSLA 112 (262)
T ss_dssp EEEEEEEESHHHHHHTCSCCEEEEE
T ss_pred EEEEECCcChHHHHcCCCcEEEEEE
Confidence 4889999999999999999997763
Done!