BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy15098
MDQGQLTGLECYWDIKYLDYLPTNKLKERLASTIDGRRKGACLFCQEYFMDLLKVTTVDM
QKPPPDFRDLYLLKKTFWQLNFNVTGHRTEND

High Scoring Gene Products

Symbol, full name Information P value
Clic
Chloride intracellular channel 		protein from Drosophila melanogaster 7.9e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy15098
        (92 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0030529 - symbol:Clic "Chloride intracellular chan...   179  7.9e-14   1


>FB|FBgn0030529 [details] [associations]
            symbol:Clic "Chloride intracellular channel" species:7227
            "Drosophila melanogaster" [GO:0005254 "chloride channel activity"
            evidence=ISS;IDA] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0006979 "response to oxidative stress"
            evidence=IMP] [GO:0005509 "calcium ion binding" evidence=IDA]
            [GO:0006821 "chloride transport" evidence=IDA] [GO:0008289 "lipid
            binding" evidence=IDA] [GO:0097305 "response to alcohol"
            evidence=IDA] [GO:0048060 "negative gravitaxis" evidence=IDA]
            EMBL:AE014298 GO:GO:0005509 Gene3D:3.40.30.10 InterPro:IPR012336
            SUPFAM:SSF52833 GO:GO:0008289 Gene3D:1.20.1050.10
            InterPro:IPR010987 SUPFAM:SSF47616 GO:GO:0005254 GO:GO:0097305
            GeneTree:ENSGT00550000074477 eggNOG:NOG282171 OMA:QADPEIE
            GO:GO:0048060 EMBL:AY058721 RefSeq:NP_572928.1 UniGene:Dm.161
            PDB:2YV7 PDBsum:2YV7 SMR:Q9VY78 STRING:Q9VY78
            EnsemblMetazoa:FBtr0073835 GeneID:32349 KEGG:dme:Dmel_CG10997
            UCSC:CG10997-RA CTD:32349 FlyBase:FBgn0030529 InParanoid:Q9VY78
            OrthoDB:EOG4P5HS2 EvolutionaryTrace:Q9VY78 GenomeRNAi:32349
            NextBio:778052 Uniprot:Q9VY78
        Length = 260

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 38/48 (79%), Positives = 38/48 (79%)

Query:    31 ASTIDGRRKGACLFCQEYFMDL----------LKVTTVDMQKPPPDFR 68
             ASTIDGRRKGACLFCQEYFMDL          LKVTTVDMQKPPPDFR
Sbjct:    29 ASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFR 76


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.141   0.455    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       92        92   0.00091  102 3  11 22  0.47    29
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  124 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.79u 0.08s 10.87t   Elapsed:  00:00:06
  Total cpu time:  10.79u 0.09s 10.88t   Elapsed:  00:00:06
  Start:  Thu Aug 15 11:12:18 2013   End:  Thu Aug 15 11:12:24 2013

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