RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15098
         (92 letters)



>g1nme.1 c.17.1.1 (A:,B:) Apopain (caspase-3, cpp32) {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 238

 Score = 29.3 bits (65), Expect = 0.039
 Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 6/56 (10%)

Query: 34 IDGRRKGACL-FCQEYFMDLLKVTTVDMQKPPPDFRDLYLLKKTFWQLNFNVTGHR 88
          +D    G C+    + F          M        D   L++TF  L + V    
Sbjct: 11 MDYPEMGLCIIINNKNFHKS-----TGMTSRSGTDVDAANLRETFRNLKYEVRNKN 61


>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 245

 Score = 29.4 bits (65), Expect = 0.042
 Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 6/55 (10%)

Query: 35 DGRRKGACL-FCQEYFMDLLKVTTVDMQKPPPDFRDLYLLKKTFWQLNFNVTGHR 88
          +  + G C+    + F  +       M       +D   L K F  L F+V  + 
Sbjct: 6  NFEKLGKCIIINNKNFDKV-----TGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 55


>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 257

 Score = 29.3 bits (65), Expect = 0.043
 Identities = 9/56 (16%), Positives = 17/56 (30%), Gaps = 6/56 (10%)

Query: 34 IDGRRKGACL-FCQEYFMDLLKVTTVDMQKPPPDFRDLYLLKKTFWQLNFNVTGHR 88
          +  R +G  L     +F         +++       D   L   F  L ++V    
Sbjct: 21 LQSRPRGLALVLSNVHFTGE-----KELEFRSGGDVDHSTLVTLFKLLGYDVHVLC 71


>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 242

 Score = 29.0 bits (64), Expect = 0.062
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 3/58 (5%)

Query: 34 IDGRRKGACL-FCQEYFMD--LLKVTTVDMQKPPPDFRDLYLLKKTFWQLNFNVTGHR 88
          +  + +G CL      F            ++       D   L  TF +L+F +  H 
Sbjct: 6  MKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 63


>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 277

 Score = 28.7 bits (63), Expect = 0.071
 Identities = 10/56 (17%), Positives = 16/56 (28%), Gaps = 6/56 (10%)

Query: 34 IDGRRKGACL-FCQEYFMDLLKVTTVDMQKPPPDFRDLYLLKKTFWQLNFNVTGHR 88
          +     G CL      F          ++       D   L++ F  L+F V    
Sbjct: 16 LSMEPCGHCLIINNVNFCRE-----SGLRTRTGSNIDCEKLRRRFSSLHFMVEVKG 66


>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera
          frugiperda) [TaxId: 7108]}
          Length = 256

 Score = 28.2 bits (62), Expect = 0.12
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 7/56 (12%)

Query: 34 IDGRRKGACL-FCQEYFMDLLKVTTVDMQKPPPDFRDLYLLKKTFWQLNFNVTGHR 88
          ++ + +G  + F  E+F          ++       D   L K    L F VT   
Sbjct: 16 MNHKHRGMAIIFNHEHF------DIHSLKSRTGTNVDSDNLSKVLKTLGFKVTVFP 65


>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1
          (clic1) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 86

 Score = 24.3 bits (52), Expect = 1.7
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 6/56 (10%)

Query: 32 STIDGRRKGACLFCQEYFMDLLKVTTVDMQKPPPDFRDLYLLKKTFWQLNFNVTGH 87
          +  DG + G C F Q  FM L       ++    +   +   ++T         G 
Sbjct: 9  AGSDGAKIGNCPFSQRLFMVLW------LKGVTFNVTTVDTKRRTETVQKLCPGGE 58


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.141    0.455 

Gapped
Lambda     K      H
   0.267   0.0484    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 376,750
Number of extensions: 16076
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 7
Length of query: 92
Length of database: 2,407,596
Length adjustment: 56
Effective length of query: 36
Effective length of database: 1,638,716
Effective search space: 58993776
Effective search space used: 58993776
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.5 bits)