BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy151
(110 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|346466585|gb|AEO33137.1| hypothetical protein [Amblyomma maculatum]
Length = 543
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%)
Query: 10 EDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYP 69
E+ P P +LD+ G +VG TSVDVLMHLGREE + +P+MTDRLSRL H+L Q +YP
Sbjct: 395 ENITCAPNPCLLDVGGYIVGATSVDVLMHLGREEISFSPKMTDRLSRLTKHILTQHSFYP 454
Query: 70 LIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
L PP+ ++ VD+ + +L VTPH+++LPSDLR FVK
Sbjct: 455 LYPPSEDINVDLSHLDDSGRLTVTPHLLVLPSDLRGFVK 493
>gi|443709652|gb|ELU04244.1| hypothetical protein CAPTEDRAFT_95153, partial [Capitella teleta]
Length = 465
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 67/89 (75%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I GV++G+TS D+L HLG EE + P DRLSRLA+H++ Q+ YYPL PP+ ++
Sbjct: 330 PSTLSIDGVIIGITSTDILFHLGAEEISMPPGGADRLSRLANHVITQRSYYPLYPPSEDV 389
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYF 106
+D E WE H++LP TPH++ILPSDLRYF
Sbjct: 390 SIDYEHWEAHSKLPTTPHLLILPSDLRYF 418
>gi|403294139|ref|XP_003938060.1| PREDICTED: DNA polymerase alpha subunit B [Saimiri boliviensis
boliviensis]
Length = 662
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP E+
Sbjct: 523 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEEM 582
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP I I+PS+LRYFVK
Sbjct: 583 AIDYETFYVYAQLPVTPDIFIIPSELRYFVK 613
>gi|296218739|ref|XP_002755571.1| PREDICTED: DNA polymerase alpha subunit B [Callithrix jacchus]
Length = 598
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRIFKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP I I+PS+LRYFVK
Sbjct: 519 AIDYETFYVYAQLPVTPDIFIIPSELRYFVK 549
>gi|363746899|ref|XP_003643842.1| PREDICTED: DNA polymerase alpha subunit B-like, partial [Gallus
gallus]
Length = 238
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 68/93 (73%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P LDI+GVV+G+TS D+L H+G EE +++ +DR +R+ H+L Q+ +YPL PP
Sbjct: 99 PDPCTLDINGVVLGLTSTDLLFHMGAEEISSSSGTSDRFTRILQHILTQRSFYPLYPPAE 158
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+ VD E + A LPVTPH++I+PS+LRYFVK
Sbjct: 159 EMNVDYESFSSFASLPVTPHVLIIPSELRYFVK 191
>gi|208967074|dbj|BAG73551.1| polymerase (DNA directed) alpha 2 [synthetic construct]
Length = 598
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|439601|gb|AAA16459.1| DNA polymerase alpha [Homo sapiens]
Length = 598
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|355566320|gb|EHH22699.1| DNA polymerase alpha 70 kDa subunit [Macaca mulatta]
Length = 598
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYETFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|410251086|gb|JAA13510.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|397516918|ref|XP_003828668.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B [Pan
paniscus]
Length = 598
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|20127448|ref|NP_002680.2| DNA polymerase alpha subunit B [Homo sapiens]
gi|90110415|sp|Q14181.2|DPOA2_HUMAN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|12654999|gb|AAH01347.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|12804263|gb|AAH02990.1| Polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|48145591|emb|CAG33018.1| POLA2 [Homo sapiens]
gi|119594779|gb|EAW74373.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Homo sapiens]
gi|123982416|gb|ABM82949.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
gi|123997079|gb|ABM86141.1| polymerase (DNA directed), alpha 2 (70kD subunit) [synthetic
construct]
Length = 598
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|114638540|ref|XP_001169495.1| PREDICTED: DNA polymerase alpha subunit B isoform 4 [Pan
troglodytes]
gi|410212336|gb|JAA03387.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410294866|gb|JAA26033.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
gi|410337017|gb|JAA37455.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Pan troglodytes]
Length = 598
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|388452542|ref|NP_001253937.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|383417163|gb|AFH31795.1| DNA polymerase alpha subunit B [Macaca mulatta]
gi|387541568|gb|AFJ71411.1| DNA polymerase alpha subunit B [Macaca mulatta]
Length = 598
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYETFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|402892875|ref|XP_003909632.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B
[Papio anubis]
Length = 598
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYETFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|426369123|ref|XP_004051546.1| PREDICTED: DNA polymerase alpha subunit B [Gorilla gorilla gorilla]
Length = 598
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVFIIPSELRYFVK 549
>gi|355751972|gb|EHH56092.1| DNA polymerase alpha 70 kDa subunit [Macaca fascicularis]
Length = 598
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYEMFYVYAQLPVTPDVLIIPSELRYFVK 549
>gi|296471438|tpg|DAA13553.1| TPA: DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I+GV+ G+TS D+L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILR 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP + I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVK 551
>gi|255708460|ref|NP_001019713.2| DNA polymerase alpha subunit B [Bos taurus]
Length = 600
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I+GV+ G+TS D+L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILR 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP + I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVK 551
>gi|194388416|dbj|BAG60176.1| unnamed protein product [Homo sapiens]
Length = 361
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 67/92 (72%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP +
Sbjct: 250 EPCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQED 309
Query: 77 LPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+ +D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 310 MAIDYESFYVYAQLPVTPDVLIIPSELRYFVK 341
>gi|75057604|sp|Q58D13.1|DPOA2_BOVIN RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|61554916|gb|AAX46631.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Bos taurus]
Length = 604
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I+GV+ G+TS D+L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILR 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP + I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVK 551
>gi|440907401|gb|ELR57555.1| DNA polymerase alpha subunit B [Bos grunniens mutus]
Length = 604
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I+GV+ G+TS D+L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILR 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP + I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVK 551
>gi|426252020|ref|XP_004019717.1| PREDICTED: DNA polymerase alpha subunit B [Ovis aries]
Length = 600
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I+GV G+TS D+L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVTFGLTSTDLLFHMGAEEISSSSGTSDRFSRILK 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP I I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDVAIDYENFYLYAQLPVTPDIFIAPSELRYFVK 551
>gi|193787682|dbj|BAG52888.1| unnamed protein product [Homo sapiens]
Length = 295
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 156 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 215
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 216 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 246
>gi|380796161|gb|AFE69956.1| DNA polymerase alpha subunit B, partial [Macaca mulatta]
Length = 297
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 158 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 217
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 218 AIDYETFYVYAQLPVTPDVLIIPSELRYFVK 248
>gi|297688192|ref|XP_002821573.1| PREDICTED: DNA polymerase alpha subunit B-like, partial [Pongo
abelii]
Length = 221
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 82 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 141
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 142 AIDYEMFYVYAQLPVTPDVLIIPSELRYFVK 172
>gi|395852330|ref|XP_003798692.1| PREDICTED: DNA polymerase alpha subunit B [Otolemur garnettii]
Length = 598
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP + I+PS+L+YFVK
Sbjct: 519 AIDYENFYVYAQLPVTPDVFIIPSELKYFVK 549
>gi|432091137|gb|ELK24349.1| DNA polymerase alpha subunit B [Myotis davidii]
Length = 622
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+G+V G+TS D+L H+G EE ++A +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 483 PCSLSINGLVFGLTSTDLLFHMGAEEISSASGTSDRFSRILKHILTQRSYYPLYPPQEDM 542
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP ++I+PS+LRYFVK
Sbjct: 543 AIDYENFYAYAQLPVTPDVLIVPSELRYFVK 573
>gi|345489814|ref|XP_001601850.2| PREDICTED: DNA polymerase alpha subunit B-like [Nasonia
vitripennis]
Length = 605
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P LDI+G+ +G+TS+D LMHL R E A D+L+RL +++L Q CYYPL PP
Sbjct: 470 PDPCTLDINGLRLGITSIDCLMHLARSEVALTQSSPDKLTRLGNYILNQACYYPLYPPAK 529
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
E+ VD E WE +A L PH++ LPSD+R+F K++
Sbjct: 530 EINVDSELWEKYAFLNEKPHVLFLPSDMRHFCKSI 564
>gi|311247333|ref|XP_003122587.1| PREDICTED: DNA polymerase alpha subunit B [Sus scrofa]
Length = 597
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 65/93 (69%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L ++G++ G+TS D+L H+G EE +++ +DR SR+ H+L Q+ YYPL PP
Sbjct: 457 PEPCTLSVNGMIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQE 516
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ +D E + HAQLPVTP + + PS+LRYFVK
Sbjct: 517 DVAIDYEHFYAHAQLPVTPDVFVAPSELRYFVK 549
>gi|449663068|ref|XP_002165302.2| PREDICTED: DNA polymerase alpha subunit B-like [Hydra
magnipapillata]
Length = 605
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/93 (53%), Positives = 66/93 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+ V G+TS D+L HLG EE ++ +DRL RL HLLQQQCYYPL P + ++
Sbjct: 464 PCTLMINDVCFGITSTDILFHLGGEEVSSYAVRSDRLGRLVDHLLQQQCYYPLHPSSEDV 523
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+D E +E +A +PVTP I++LPSDLRYF+K L
Sbjct: 524 NLDYEKFESYAFMPVTPDILVLPSDLRYFIKDL 556
>gi|73983698|ref|XP_533234.2| PREDICTED: DNA polymerase alpha subunit B [Canis lupus familiaris]
Length = 595
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/91 (50%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++A +DRLSR+ H+L Q+ YYPL PP ++
Sbjct: 455 PCNLSINGVIFGLTSTDLLFHMGAEEISSASGTSDRLSRILKHILTQRSYYPLYPPQEDM 514
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLP+TP I I+PS+L+YFVK
Sbjct: 515 AIDYENFYIYAQLPITPDIFIIPSELKYFVK 545
>gi|410974408|ref|XP_003993639.1| PREDICTED: DNA polymerase alpha subunit B [Felis catus]
Length = 599
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++GVV G+TS D+L H+G EE +++ +DRLSR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSVNGVVFGLTSTDLLFHMGAEEISSSSGTSDRLSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+L+YFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIIPSELKYFVK 549
>gi|307201565|gb|EFN81327.1| DNA polymerase subunit alpha B [Harpegnathos saltator]
Length = 470
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/107 (50%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 6 KLLSEDSDSK--PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQ 63
KLL S+ K P P +LDI G+ +GVTSVDV+ H+G+EE + M DRLSRLA H+L
Sbjct: 324 KLLQNYSNLKLMPDPCILDIFGLKIGVTSVDVIKHIGKEEISNISGM-DRLSRLADHVLA 382
Query: 64 QQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
Q C+YP+ P + +L VD E WE +A PHI+ILPSD+R + K +
Sbjct: 383 QTCFYPVYPSSEDLNVDTELWEKYAFFDQQPHILILPSDMRCYCKVI 429
>gi|431910281|gb|ELK13354.1| DNA polymerase alpha subunit B [Pteropus alecto]
Length = 639
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++GVV+G+TS D+L H+G EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 499 PCSLSVNGVVLGLTSTDLLFHMGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 558
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 559 AIDYESFCAYAQLPVTPDVFIVPSELRYFVK 589
>gi|321465942|gb|EFX76940.1| hypothetical protein DAPPUDRAFT_321802 [Daphnia pulex]
Length = 476
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 66/93 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P VL++ GV + +TS D+L HL +EE + AP +DR+ RL SHL QQ +YPL PP E+
Sbjct: 343 PCVLNVEGVFIALTSTDILFHLSKEEISVAPPGSDRMGRLVSHLFSQQSFYPLNPPAEEM 402
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
VDME + + +L TPH++++PSDLR+F+K +
Sbjct: 403 SVDMEHADDYCKLTFTPHLLLVPSDLRFFIKNV 435
>gi|149725407|ref|XP_001492574.1| PREDICTED: DNA polymerase alpha subunit B [Equus caballus]
Length = 598
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 64/91 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+GV+ G+TS D+L H+G EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSFSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYAYAQLPVTPDVFIIPSELRYFVK 549
>gi|52346026|ref|NP_001005060.1| DNA-directed DNA polymerase alpha 2 [Xenopus (Silurana) tropicalis]
gi|49903509|gb|AAH76954.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++GV++G+TS D+L H+G EE +++ DR SR+ H+L Q+ YYPL PPN E+
Sbjct: 458 PCTLSVNGVILGITSTDLLFHMGAEEISSSVGAPDRFSRILRHILTQRSYYPLYPPNEEI 517
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
VD E + +A +PVTP I I+PS+LRYF+K
Sbjct: 518 NVDYEAFYSYAPMPVTPDIFIVPSELRYFIK 548
>gi|89268970|emb|CAJ82570.1| polymerase (DNA directed), alpha 2 (70kD subunit) [Xenopus
(Silurana) tropicalis]
Length = 597
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++GV++G+TS D+L H+G EE +++ DR SR+ H+L Q+ YYPL PPN E+
Sbjct: 458 PCTLSVNGVILGITSTDLLFHMGAEEISSSVGAPDRFSRILRHILTQRSYYPLYPPNEEI 517
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
VD E + +A +PVTP I I+PS+LRYF+K
Sbjct: 518 NVDYEAFYSYAPMPVTPDIFIVPSELRYFIK 548
>gi|67514566|ref|NP_445932.2| DNA polymerase alpha subunit B [Rattus norvegicus]
gi|66910546|gb|AAH97300.1| Polymerase (DNA directed), alpha 2 [Rattus norvegicus]
Length = 600
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCNLSINGVMFGLTSTDLLFHIGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>gi|52788200|sp|O89043.2|DPOA2_RAT RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit; AltName: Full=DNA
polymerase subunit II
gi|5912572|emb|CAB56208.1| DNA polymerase alpha [Rattus norvegicus]
Length = 600
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCNLSINGVMFGLTSTDLLFHIGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>gi|149062123|gb|EDM12546.1| polymerase (DNA directed), alpha 2, isoform CRA_a [Rattus
norvegicus]
Length = 600
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCNLSINGVMFGLTSTDLLFHIGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>gi|3676244|emb|CAA09721.1| DNA polymerase alpha subunit II [Rattus norvegicus]
Length = 495
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 66/93 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 354 PCSLSINGVMFGLTSTDLLFHIGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPHEDM 413
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+D E + +AQLPVTP + I+PS+LRYFVK +
Sbjct: 414 AIDYENFYTYAQLPVTPDVFIVPSELRYFVKDI 446
>gi|255708463|ref|NP_001157529.1| DNA polymerase alpha subunit B isoform 2 [Mus musculus]
gi|26352896|dbj|BAC40078.1| unnamed protein product [Mus musculus]
Length = 566
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 65/92 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCSLSINGVMFGLTSTDLLFHIGAEEIFSSSGTSDRFSRVLKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKA 109
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVKG 550
>gi|148701242|gb|EDL33189.1| polymerase (DNA directed), alpha 2, isoform CRA_b [Mus musculus]
Length = 608
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 65/92 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 501 PCSLSINGVMFGLTSTDLLFHIGAEEIFSSSGTSDRFSRVLKHILTQRSYYPLYPPHEDM 560
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKA 109
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 561 AIDYENFYTYAQLPVTPDVFIVPSELRYFVKG 592
>gi|307166257|gb|EFN60471.1| DNA polymerase subunit alpha B [Camponotus floridanus]
Length = 308
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P +LD++G+ +GVTSVDV+ H+G+EE + DRL RLA H+L Q C+YP+ PP
Sbjct: 175 PDPCILDVAGLKIGVTSVDVIKHIGKEEISNV--TGDRLGRLADHVLAQTCFYPVYPPFE 232
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+L VD + WE HA PH++ILPSD+R + K +
Sbjct: 233 DLNVDTDLWEKHAFFDQQPHVLILPSDMRCYCKVI 267
>gi|303659|dbj|BAA02746.1| DNA polymerase alpha associated subunit [Mus musculus]
Length = 600
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCSLSINGVMFGLTSTDLLFHIGAEEIFSSSGTSDRFSRVLKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>gi|31982107|ref|NP_032919.2| DNA polymerase alpha subunit B isoform 1 [Mus musculus]
gi|341940457|sp|P33611.2|DPOA2_MOUSE RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 70 kDa subunit
gi|18204750|gb|AAH21424.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|40352968|gb|AAH64795.1| Polymerase (DNA directed), alpha 2 [Mus musculus]
gi|74211927|dbj|BAE29306.1| unnamed protein product [Mus musculus]
gi|148701243|gb|EDL33190.1| polymerase (DNA directed), alpha 2, isoform CRA_c [Mus musculus]
Length = 600
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCSLSINGVMFGLTSTDLLFHIGAEEIFSSSGTSDRFSRVLKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>gi|74228759|dbj|BAE21869.1| unnamed protein product [Mus musculus]
Length = 600
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCSLSINGVMFGLTSTDLLFHIGAEEIFSSSGTSDRFSRVLKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>gi|281350633|gb|EFB26217.1| hypothetical protein PANDA_004805 [Ailuropoda melanoleuca]
Length = 569
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++A +DRLSR+ H+L Q+ YYPL PP ++
Sbjct: 429 PCSLSINGVIFGLTSTDLLFHMGAEEISSASGTSDRLSRILKHILTQRSYYPLYPPQEDM 488
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQL VTP + I+PS+L+YFVK
Sbjct: 489 AIDYESFYTYAQLSVTPDVFIIPSELKYFVK 519
>gi|291414417|ref|XP_002723449.1| PREDICTED: DNA-directed DNA polymerase alpha 2 [Oryctolagus
cuniculus]
Length = 600
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ISGV+ G+TS D+L H+G EE +++ +DR SR+ H+L Q+ +YPL PP
Sbjct: 461 PCSLSISGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILKHILTQRSFYPLYPPQEGT 520
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 521 AIDYENFYAYAQLPVTPDVFIVPSELRYFVK 551
>gi|355712602|gb|AES04403.1| polymerase , alpha 2 [Mustela putorius furo]
Length = 594
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 66/91 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++GV++G+TS D+L H+G EE ++ +DRLSR+ H+L Q+ YYPL PP ++
Sbjct: 455 PCSLAVNGVILGLTSTDLLFHMGAEEISSTSGPSDRLSRILKHILTQRSYYPLYPPQEDM 514
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+L+YFVK
Sbjct: 515 AIDYENFYTYAQLPVTPDVFIIPSELKYFVK 545
>gi|301762582|ref|XP_002916691.1| PREDICTED: DNA polymerase alpha subunit B-like [Ailuropoda
melanoleuca]
Length = 595
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++A +DRLSR+ H+L Q+ YYPL PP ++
Sbjct: 455 PCSLSINGVIFGLTSTDLLFHMGAEEISSASGTSDRLSRILKHILTQRSYYPLYPPQEDM 514
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQL VTP + I+PS+L+YFVK
Sbjct: 515 AIDYESFYTYAQLSVTPDVFIIPSELKYFVK 545
>gi|354505058|ref|XP_003514589.1| PREDICTED: DNA polymerase alpha subunit B-like [Cricetulus griseus]
gi|344258643|gb|EGW14747.1| DNA polymerase alpha subunit B [Cricetulus griseus]
Length = 600
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 64/91 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHIGAEEICSSSGTPDRFSRILKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQ+PVTP + I+PS+LRYFVK
Sbjct: 519 SIDYENFYTYAQMPVTPDVFIVPSELRYFVK 549
>gi|348564960|ref|XP_003468272.1| PREDICTED: DNA polymerase alpha subunit B-like [Cavia porcellus]
Length = 598
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 64/91 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLAINGVIFGLTSTDLLFHMGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+L+YFVK
Sbjct: 519 AIDYENFYAYAQLPVTPDVFIVPSELKYFVK 549
>gi|357628416|gb|EHJ77759.1| DNA-directed DNA polymerase alpha 2 [Danaus plexippus]
Length = 586
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L+I+G +VG+TS DVLM + +EE + + D+LSRL+ H+L+QQCYYP
Sbjct: 449 PDPSTLNINGYIVGITSYDVLMSINQEEISHG-SVGDKLSRLSGHVLRQQCYYPTAGSLG 507
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
L D W HAQLP TPHI+++PS+ RYFVK
Sbjct: 508 SLAADGSLWAAHAQLPATPHILVVPSNFRYFVK 540
>gi|395544820|ref|XP_003774304.1| PREDICTED: DNA polymerase alpha subunit B, partial [Sarcophilus
harrisii]
Length = 634
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 67/91 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P +L I+GV++G+TS D+L H+G EE +++ +DR SR+ H+L Q+ +YPL PP E+
Sbjct: 496 PCILSINGVILGLTSTDLLFHMGAEEISSSSSASDRFSRILKHVLTQRSFYPLYPPFEEM 555
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLP+TP ++I PSDLRYFVK
Sbjct: 556 SIDYEHFYSYAQLPITPDVLIAPSDLRYFVK 586
>gi|126338934|ref|XP_001379826.1| PREDICTED: DNA polymerase alpha subunit B [Monodelphis domestica]
Length = 878
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 67/92 (72%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++GVV+G+TS D+L H+G EE +++ +DR SR+ H+L Q+ YYPL PP E+
Sbjct: 468 PCTLSVNGVVLGLTSTDLLFHMGAEEISSSSSTSDRFSRILKHILTQRSYYPLYPPFEEM 527
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKA 109
+D E + +AQLPVTP + I+PS+LRYFVK+
Sbjct: 528 SIDFEHFYSYAQLPVTPDVFIVPSELRYFVKS 559
>gi|351701969|gb|EHB04888.1| DNA polymerase alpha subunit B [Heterocephalus glaber]
Length = 598
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 64/91 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE ++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCTLSINGVIFGLTSTDLLFHMGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+L+YFVK
Sbjct: 519 AIDYENFYAYAQLPVTPDVFIVPSELKYFVK 549
>gi|148222523|ref|NP_001086972.1| polymerase (DNA directed), alpha 2, accessory subunit [Xenopus
laevis]
gi|50414931|gb|AAH77841.1| MGC80532 protein [Xenopus laevis]
Length = 598
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 63/91 (69%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++GVV+G+TS D+L H+G EE +++ DR SR+ H+L Q+ YYPL PPN E+
Sbjct: 459 PCTLSVNGVVIGMTSTDLLFHMGAEEISSSAGAPDRFSRILRHILTQRSYYPLYPPNEEI 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +PVTP + I+PS+LRYF+K
Sbjct: 519 NIDYEALYSYTPMPVTPDVFIVPSELRYFIK 549
>gi|196006784|ref|XP_002113258.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
gi|190583662|gb|EDV23732.1| hypothetical protein TRIADDRAFT_57222 [Trichoplax adhaerens]
Length = 595
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 63/91 (69%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L ++ V +G+TS D+L H+G EE A+ P M+DR+ RL HL+ Q+ YYPL PP+ E+
Sbjct: 457 PCTLIVNDVTIGLTSTDILFHMGAEETASPPGMSDRIGRLLKHLIHQRNYYPLYPPSEEV 516
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
D E + +PVTP I+I+PSDLRYFVK
Sbjct: 517 NFDRENFVNFGFMPVTPDILIVPSDLRYFVK 547
>gi|156384823|ref|XP_001633332.1| predicted protein [Nematostella vectensis]
gi|156220400|gb|EDO41269.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L + V +G+TS DVL++LG EE A P +DRL RL H+L Q +YPL PPN E+
Sbjct: 465 PCTLLVGNVTIGLTSTDVLLNLGSEETACPPGSSDRLGRLVKHILHQHSFYPLNPPNEEV 524
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
VD E H LP +P +++LPSDLRYF K +
Sbjct: 525 NVDYERLSHHGTLPCSPDLLVLPSDLRYFTKNI 557
>gi|332023529|gb|EGI63765.1| DNA polymerase alpha subunit B [Acromyrmex echinatior]
Length = 573
Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/110 (43%), Positives = 72/110 (65%), Gaps = 5/110 (4%)
Query: 4 LNKLLSEDSDS---KPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASH 60
N+ LS++ + P P +LDI+ + +G+TSVDV+ H+G+EE + DRLSRL +H
Sbjct: 425 FNRKLSQNYSNLKVMPDPCILDIADLKIGITSVDVIKHIGKEEISNVS--GDRLSRLVNH 482
Query: 61 LLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+L Q C+YP+ PP+ +L VD E WE A PH++ILPSD+R + K +
Sbjct: 483 VLTQTCFYPVYPPSEDLNVDTELWEKCAFFDQQPHLLILPSDMRCYCKVI 532
>gi|291222797|ref|XP_002731400.1| PREDICTED: MGC80532 protein-like [Saccoglossus kowalevskii]
Length = 601
Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 64/91 (70%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+T+ D+L HLG EE + +DRL+RL H+L Q YYPL PP E+
Sbjct: 464 PCTLSINGVIFGITATDILFHLGGEEISWPVTGSDRLARLCKHILTQHNYYPLYPPADEV 523
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E ++ +A++ VTP ++ILPSDLR+F+K
Sbjct: 524 NIDYEYFDHYAKMQVTPDVLILPSDLRFFIK 554
>gi|322801402|gb|EFZ22063.1| hypothetical protein SINV_03428 [Solenopsis invicta]
Length = 521
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P +LD+ + +G+TSVDV+ H+GREE + DRL RLA+H+L Q +YP+ PP+
Sbjct: 335 PDPCILDVESLKIGITSVDVVKHIGREEISNVS--GDRLRRLANHVLSQGSFYPVYPPDE 392
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+L VD E WE H PH++ILPSD+R F K +
Sbjct: 393 DLNVDRELWEQHTFFNQQPHLLILPSDMRCFCKTI 427
>gi|405963161|gb|EKC28759.1| DNA polymerase alpha subunit B [Crassostrea gigas]
Length = 607
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/94 (47%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFA-AAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P P V+DI+ V+ G+TS DV+ LG EE + P +DR++RLA HLL QQ +YPL P
Sbjct: 465 PDPCVVDINNVIFGLTSSDVMFQLGAEEISFNPPGASDRMARLAEHLLTQQNFYPLYPSP 524
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ +D E +E +A++P TPH+++LPSDL+ F K
Sbjct: 525 EDVNIDYEVFEYYARMPCTPHVLVLPSDLKQFTK 558
>gi|380025274|ref|XP_003696402.1| PREDICTED: DNA polymerase alpha subunit B-like [Apis florea]
Length = 531
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 14 SKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP 73
S P P +++I + +G+TSVD+L HLG++E + P M DRL RLA H+L Q +YPL PP
Sbjct: 395 SMPDPCIINIDNLYIGITSVDILRHLGQQEVSNTPGM-DRLGRLADHILSQTTFYPLYPP 453
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
L +D W +A PHI+ILPSD++Y+ K+L
Sbjct: 454 LSGLNLDTTLWTKYACFERQPHILILPSDVKYYCKSL 490
>gi|340714315|ref|XP_003395675.1| PREDICTED: DNA polymerase alpha subunit B-like [Bombus terrestris]
Length = 593
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/108 (45%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 5 NKLLSEDSD--SKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLL 62
NKL S ++ S P P ++++ G+ +GVTSVDVL HLG++E + P M DRL RLA H+L
Sbjct: 446 NKLGSNTTNICSMPDPCIINVDGLHIGVTSVDVLRHLGQQEVSNTPGM-DRLGRLAEHVL 504
Query: 63 QQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
Q +YP+ PP L +D W+ +A PH++ILPSD+R++ K L
Sbjct: 505 SQSSFYPVYPPPPGLNLDTRLWKQYACFERQPHVLILPSDVRHYCKPL 552
>gi|350417323|ref|XP_003491366.1| PREDICTED: DNA polymerase alpha subunit B-like [Bombus impatiens]
Length = 593
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/108 (45%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 5 NKLLSEDSD--SKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLL 62
NKL S ++ S P P ++++ G+ +GVTSVDVL HLG++E + P M DRL RLA H+L
Sbjct: 446 NKLGSSTTNICSMPDPCIINVDGLHIGVTSVDVLRHLGQQEVSNTPGM-DRLGRLAEHVL 504
Query: 63 QQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
Q +YP+ PP L +D W+ +A PH++ILPSD+R++ K L
Sbjct: 505 SQSSFYPVYPPPPGLNLDTRLWKQYACFERQPHVLILPSDVRHYCKPL 552
>gi|410913631|ref|XP_003970292.1| PREDICTED: DNA polymerase alpha subunit B-like [Takifugu rubripes]
Length = 598
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 8 LSEDSDSK----PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQ 63
LS+D + P P L I GV G+TS D+L H+G EE + +DR SR+ H+L
Sbjct: 446 LSKDQSQRITLVPDPCTLLIDGVTFGITSTDILFHMGAEEISCG-TGSDRFSRILRHMLS 504
Query: 64 QQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
Q+ +YPL PP ++ +D E ++ Q+PVTP ++ILPS+LRYF+K
Sbjct: 505 QRSFYPLYPPVEDVNMDYEKFQSFGQMPVTPDVLILPSELRYFIK 549
>gi|328788469|ref|XP_001120826.2| PREDICTED: DNA polymerase alpha subunit B [Apis mellifera]
Length = 582
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 5 NKLLSEDSD--SKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLL 62
NK+ S ++ S P P ++++ + +G+TSVD+L HLG++E + P M DRL RLA H+L
Sbjct: 435 NKIGSNSANLYSMPDPCIINVDNLHIGITSVDILRHLGQQEVSNTPGM-DRLGRLADHIL 493
Query: 63 QQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
Q +YPL PP L +D W +A PHI+ILPSD++++ K L
Sbjct: 494 SQTTFYPLYPPFSGLNLDTTLWTKYACFERQPHILILPSDVKHYCKLL 541
>gi|213514402|ref|NP_001133624.1| DNA polymerase subunit alpha B [Salmo salar]
gi|209154730|gb|ACI33597.1| DNA polymerase subunit alpha B [Salmo salar]
Length = 608
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L I GV G+TS D+L H+G EE + A +DR SR+ H+L Q+ YYPL PP
Sbjct: 467 PDPCTLLIDGVTFGLTSTDILFHMGAEEISCA-SGSDRFSRILKHMLTQRNYYPLYPPVE 525
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+ +D E ++ + Q+P++P ++I+PS+LR+F+K
Sbjct: 526 EVNMDYEKFQGYGQMPLSPDVLIVPSELRFFIK 558
>gi|348514227|ref|XP_003444642.1| PREDICTED: DNA polymerase alpha subunit B isoform 1 [Oreochromis
niloticus]
Length = 602
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 4 LNKLLSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQ 63
+NK ++ P P L I GV +G+TS D+L+H+G EE + +D+ SR+ H+L
Sbjct: 449 INKEQAQRVTLVPDPCTLLIDGVTIGLTSTDILIHMGPEEISCG-TGSDKFSRILKHMLT 507
Query: 64 QQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
Q+ YYPL PP E+ +D E ++ Q+P+TP ++++PS++RYFVK
Sbjct: 508 QRSYYPLYPPADEVNMDYEKFQSFGQMPLTPDVLVVPSEMRYFVK 552
>gi|348514229|ref|XP_003444643.1| PREDICTED: DNA polymerase alpha subunit B isoform 2 [Oreochromis
niloticus]
Length = 621
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 4 LNKLLSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQ 63
+NK ++ P P L I GV +G+TS D+L+H+G EE + +D+ SR+ H+L
Sbjct: 468 INKEQAQRVTLVPDPCTLLIDGVTIGLTSTDILIHMGPEEISCG-TGSDKFSRILKHMLT 526
Query: 64 QQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
Q+ YYPL PP E+ +D E ++ Q+P+TP ++++PS++RYFVK
Sbjct: 527 QRSYYPLYPPADEVNMDYEKFQSFGQMPLTPDVLVVPSEMRYFVK 571
>gi|432877683|ref|XP_004073218.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryzias latipes]
Length = 603
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L I GV G+TS D+L H+G EE + +DR SR+ H+L Q+ YYPL PP
Sbjct: 462 PDPCTLLIDGVTFGLTSTDILFHMGAEEISNG-SGSDRFSRILKHMLVQRSYYPLYPPAE 520
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+ +D E ++ AQ+P+ P ++I+PS+LRYF+K
Sbjct: 521 EVNMDYEKFQSFAQIPLIPDVLIVPSELRYFIK 553
>gi|189240313|ref|XP_001807778.1| PREDICTED: similar to polymerase (DNA-directed), alpha (70kD)
[Tribolium castaneum]
gi|270011548|gb|EFA07996.1| hypothetical protein TcasGA2_TC005585 [Tribolium castaneum]
Length = 539
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P++LDI GV +G ++ D+L HL + E + R+ RL SH+ Q+C+YPL PP+
Sbjct: 400 PNPFILDIDGVTIGGSTADILFHLSKAECSKGTHDVPRVDRLISHIFHQRCFYPLYPPDN 459
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ VD E HA L P IM LPS L++FVK
Sbjct: 460 DIRVDHGLVEQHAMLETAPDIMFLPSRLKHFVK 492
>gi|344295886|ref|XP_003419641.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase alpha subunit B-like
[Loxodonta africana]
Length = 597
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L H+G EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 458 PCSLSINGVIFGLTSTDLLFHMGSEEISSSSGTSDRFSRILKHVLTQRSYYPLYPPQEDM 517
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 518 AIDYENFYAYAQLPVTPDVFIIPSELRYFVK 548
>gi|115803045|ref|XP_780208.2| PREDICTED: DNA polymerase alpha subunit B-like isoform 2
[Strongylocentrotus purpuratus]
Length = 604
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 60/93 (64%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P +++I+G+ + TS D+L HL REE + P +DRL RL H+L Q +YPL P + E+
Sbjct: 461 PEMININGINIATTSTDILFHLSREEISCPPGSSDRLGRLVRHILTQHNFYPLYPASEEV 520
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
PVD E + + ++ PHI + PS LR+FVK +
Sbjct: 521 PVDYEKFHQYGKMGCAPHIFVCPSRLRFFVKEI 553
>gi|47225240|emb|CAG09740.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 8 LSEDSDSK----PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQ 63
LS+D + P P L I V G+TS D+L H+G EE + +DR SR+ H+L
Sbjct: 195 LSKDQSQRVTLVPDPCTLLIDNVAFGITSTDILFHMGAEEISCG-TGSDRFSRILRHMLT 253
Query: 64 QQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
Q+ +YPL PP ++ +D E ++ Q+P+TP ++ILPS+LRYF+K
Sbjct: 254 QRSFYPLYPPVEDVNMDFEKFQSFGQMPITPDVLILPSELRYFIK 298
>gi|390332265|ref|XP_003723454.1| PREDICTED: DNA polymerase alpha subunit B-like isoform 1
[Strongylocentrotus purpuratus]
Length = 604
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 60/93 (64%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P +++I+G+ + TS D+L HL REE + P +DRL RL H+L Q +YPL P + E+
Sbjct: 461 PEMININGINIATTSTDILFHLSREEISCPPGSSDRLGRLVRHILTQHNFYPLYPASEEV 520
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
PVD E + + ++ PHI + PS LR+FVK +
Sbjct: 521 PVDYEKFHQYGKMGCAPHIFVCPSRLRFFVKEI 553
>gi|167537209|ref|XP_001750274.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771264|gb|EDQ84933.1| predicted protein [Monosiga brevicollis MX1]
Length = 952
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P I +V GV++ D+LMHL ++E +A +DR++RLA HL+QQ+ YYPL+PP+
Sbjct: 457 PNPCTFKIQELVFGVSNTDILMHLSKQE-SAHNAGSDRMARLAHHLIQQRSYYPLLPPDQ 515
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+P++ + H +PVTP ++++PSDLR+F+K
Sbjct: 516 SVPLNYAHID-HVAMPVTPDVLLVPSDLRFFIK 547
>gi|256083451|ref|XP_002577957.1| transforming growth factor-beta receptor type I [Schistosoma
mansoni]
gi|353230170|emb|CCD76341.1| putative transforming growth factor-beta receptor type I
[Schistosoma mansoni]
Length = 620
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 57/93 (61%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P + I V G+TSVD+L L EE +A +DR++RL H+L +YP+ PP+
Sbjct: 458 PDPCLFQIGEYVFGLTSVDILKDLSCEEISAGCSGSDRITRLCRHILASSSFYPVHPPDD 517
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP+D W +AQ VTPH +ILPS LR FVK
Sbjct: 518 GLPLDYPLWSQYAQFSVTPHCLILPSKLRQFVK 550
>gi|41054613|ref|NP_955875.1| DNA polymerase alpha subunit B [Danio rerio]
gi|28279175|gb|AAH45928.1| Polymerase (DNA directed), alpha 2 [Danio rerio]
Length = 599
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L I V G+TS D+L H+G EE ++ T+R SR+ H+L Q+ YYPL PP
Sbjct: 458 PDPCTLLIGNVTFGLTSTDILFHMGAEEISSGTG-TERFSRIMKHMLTQRSYYPLYPPAE 516
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+ +D + ++ +Q+ +TP I++ PS+LRYF+K
Sbjct: 517 EVNMDYDKFQQFSQMSLTPDILVAPSELRYFIK 549
>gi|41107576|gb|AAH65460.1| Pola2 protein [Danio rerio]
Length = 600
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L I V G+TS D+L H+G EE ++ T+R SR+ H+L Q+ YYPL PP
Sbjct: 459 PDPCTLLIGNVTFGLTSTDILFHMGAEEISSGTG-TERFSRIMKHMLTQRSYYPLYPPAE 517
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+ +D + ++ +Q+ +TP I++ PS+LRYF+K
Sbjct: 518 EVNMDYDKFQQFSQMSLTPDILLAPSELRYFIK 550
>gi|358336737|dbj|GAA55174.1| DNA polymerase alpha subunit B [Clonorchis sinensis]
Length = 823
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P + I V GVTSVDV HL EE ++ DR+SRL HLL +YP+ PP+ +L
Sbjct: 673 PCLFRIGDYVFGVTSVDVPFHLSCEEISSNCS-GDRISRLCQHLLSSGSFYPIHPPSDDL 731
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
P+D W A++PVTPH +I+PS LR FVK
Sbjct: 732 PLDYPLWNRRARMPVTPHCLIVPSRLRQFVK 762
>gi|332249812|ref|XP_003274050.1| PREDICTED: DNA polymerase alpha subunit B [Nomascus leucogenys]
Length = 582
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 7/91 (7%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I+GV+ G+TS D+L HLG EE + L Q+ YYPL PP ++
Sbjct: 450 PCSLSINGVIFGLTSTDLLFHLGAEEISXX-------XXXXXXXLTQRSYYPLYPPQEDM 502
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 503 AIDYETFYVYAQLPVTPDVLIIPSELRYFVK 533
>gi|255547882|ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase, putative [Ricinus communis]
Length = 621
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPE---MTDRLSRLASHLLQQQCYYPLIPPN 74
P + + + V VG +VD++ LG EE + P ++R+SRLA+H+L Q+ +YPL PP
Sbjct: 476 PGIFEANQVRVGCCTVDIIKQLGSEEMSRNPTDGTPSNRMSRLANHILSQRSFYPLYPPA 535
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
++P+D +P PHI+I+PSD++YF+K L
Sbjct: 536 EDVPLDFSLAPEALHIPSVPHILIVPSDMKYFIKVL 571
>gi|357463079|ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit B [Medicago truncatula]
Length = 616
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFA---AAPEMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + V VG ++DVL + EE + A + DRLSRLA+H+L QQ +YPL PP
Sbjct: 472 NPGIFEANEVKVGCCTLDVLKQISGEEISRISADRKPIDRLSRLANHILNQQSFYPLYPP 531
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D QLP+ P ++ILPSDL+YFVK L
Sbjct: 532 AESVPLDFSLAPEALQLPLVPDVLILPSDLKYFVKVL 568
>gi|383863803|ref|XP_003707369.1| PREDICTED: DNA polymerase alpha subunit B-like [Megachile
rotundata]
Length = 593
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 14 SKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP 73
S P P ++ + G+ +G+TSVDVL HLG+ E + M DR+ RLA H+L Q +YPL P
Sbjct: 457 SMPDPCIISVEGLKIGITSVDVLRHLGQHEVSNMSGM-DRVGRLADHVLSQATFYPLHPA 515
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
L D + +A PHIMILPSD++Y+ K
Sbjct: 516 PSGLNCDSTLLKKYACFKRQPHIMILPSDIKYYCK 550
>gi|297841461|ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
gi|297334453|gb|EFH64871.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata]
Length = 619
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM--TDRLSRLASHLLQQQCYYPLIPPNV 75
P + + V VG +VDVL L EE + P TDR+SRLASHLL+Q+ +YPL PP
Sbjct: 478 PGTFEANQVKVGCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPE 537
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP D Q+ P I++LPSD+RYFVK L
Sbjct: 538 SLPYDSSLAPKALQILSIPDILLLPSDMRYFVKIL 572
>gi|339251866|ref|XP_003371156.1| DNA polymerase epsilon subunit B superfamily [Trichinella spiralis]
gi|316968641|gb|EFV52899.1| DNA polymerase epsilon subunit B superfamily [Trichinella spiralis]
Length = 586
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P +L++ GV+VG+TS D+L HL EE + +R++R+ +HLL Q+ +YPL P
Sbjct: 445 PDPCLLNVGGVIVGITSTDILWHLKNEELVEGIQQGERVNRMITHLLMQRSFYPLCPSG- 503
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+ V+ +L+ +L V P I+ILPS +F+K++
Sbjct: 504 DATVEYSKLKLYGELSVRPDILILPSKFHHFIKSI 538
>gi|30697540|ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2 [Arabidopsis thaliana]
Length = 620
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM--TDRLSRLASHLLQQQCYYPLIPPN 74
P + + V V +VDVL L EE + P TDR+SRLASHLL+Q+ +YPL PP
Sbjct: 478 NPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPP 537
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP D Q+ P I++LPSD+RYFVK L
Sbjct: 538 ESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKIL 573
>gi|26452176|dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis thaliana]
Length = 620
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM--TDRLSRLASHLLQQQCYYPLIPPN 74
P + + V V +VDVL L EE + P TDR+SRLASHLL+Q+ +YPL PP
Sbjct: 478 NPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPP 537
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP D Q+ P I++LPSD+RYFVK L
Sbjct: 538 ESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKIL 573
>gi|356569195|ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 14 SKPRPWVLDISGVVVGVTSVDVLMHLGREEF---AAAPEMTDRLSRLASHLLQQQCYYPL 70
S P + + + V VG +VD+L + EE AA + DRLSRLA+H+L QQ +YPL
Sbjct: 459 SLSNPGIFEANKVKVGCCTVDILKQISGEEISRTAADGKPIDRLSRLANHILNQQSFYPL 518
Query: 71 IPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
PP +P+D QL P I+ILPSD++YFVK L
Sbjct: 519 YPPAEGVPLDFSLAPEALQLSSIPDILILPSDIKYFVKVL 558
>gi|12861304|dbj|BAB32165.1| unnamed protein product [Mus musculus]
Length = 121
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 39 LGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMI 98
+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++ +D E + +AQLPVTP + I
Sbjct: 1 IGAEEIFSSSGTSDRFSRVLKHILTQRSYYPLYPPHEDMAIDYENFYTYAQLPVTPDVFI 60
Query: 99 LPSDLRYFVK 108
+PS+LRYFVK
Sbjct: 61 VPSELRYFVK 70
>gi|320166831|gb|EFW43730.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 649
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA--PEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P I+ V +G+ + D+L HL EE A A + +DRL+RLA HLL Q+ +YPL PP +
Sbjct: 501 PGTFVINEVTIGIITSDILFHLSSEETARARAGDTSDRLARLAGHLLDQRSFYPLFPPAL 560
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ LPVTP ++ILPSDL++F K
Sbjct: 561 GTNTEL-THRKQLDLPVTPDVLILPSDLKFFAK 592
>gi|195394642|ref|XP_002055951.1| GJ10668 [Drosophila virilis]
gi|194142660|gb|EDW59063.1| GJ10668 [Drosophila virilis]
Length = 600
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++D+ GV +GVTS DVL HL EFAA +R+ R +HL Q +YP+ PP
Sbjct: 459 PDPSLVDLDGVTLGVTSTDVLDHLLSHEFAA--NAGERMHRAINHLFNQGSFYPICPPAD 516
Query: 76 E-LPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E + D + + +AQL P+++ILPSD R+F++
Sbjct: 517 ENMSYDSQLAQKYAQLKQLPNVLILPSDQRHFIR 550
>gi|356538103|ref|XP_003537544.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 605
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 14 SKPRPWVLDISGVVVGVTSVDVLMHLGREEF---AAAPEMTDRLSRLASHLLQQQCYYPL 70
S P + + + V VG +VD+L + EE AA + DRLSRLA+H+L QQ +YPL
Sbjct: 458 SLSNPGIFEANKVKVGCCTVDILKQISGEEISRTAADGKPIDRLSRLANHILNQQSFYPL 517
Query: 71 IPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
P +P+D QL P I+ILPSD++YFVK L
Sbjct: 518 YTPAESVPLDFSLAPEALQLSFVPDILILPSDIKYFVKVL 557
>gi|12324682|gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
Length = 620
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 24 SGVVVGVTSVDVLMHLGREEFAAAPEM--TDRLSRLASHLLQQQCYYPLIPPNVELPVDM 81
S V V +VDVL L EE + P TDR+SRLASHLL+Q+ +YPL PP LP D
Sbjct: 493 SQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLPYDS 552
Query: 82 ECWELHAQLPVTPHIMILPSDLRYFVK 108
Q+ P I++LPSD+RYFVK
Sbjct: 553 SLAPKALQISSIPDILLLPSDMRYFVK 579
>gi|11072016|gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
Length = 803
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 26 VVVGVTSVDVLMHLGREEFAAAPEM--TDRLSRLASHLLQQQCYYPLIPPNVELPVDMEC 83
V V +VDVL L EE + P TDR+SRLASHLL+Q+ +YPL PP LP D
Sbjct: 491 VKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLPYDSSL 550
Query: 84 WELHAQLPVTPHIMILPSDLRYFVKAL 110
Q+ P I++LPSD+RYFVK L
Sbjct: 551 APKALQISSIPDILLLPSDMRYFVKIL 577
>gi|195112560|ref|XP_002000840.1| GI10451 [Drosophila mojavensis]
gi|193917434|gb|EDW16301.1| GI10451 [Drosophila mojavensis]
Length = 597
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++D+ G+ +GV+S DV+ HL +EFAA +R+ R +HL Q +YP+ PP
Sbjct: 456 PDPSLVDLDGITLGVSSTDVIDHLLSQEFAA--NAGERMHRAINHLFNQGTFYPICPPAD 513
Query: 76 E-LPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E + D + + +AQL P+++ILPSD R+F++
Sbjct: 514 ENMSYDSQLAQKYAQLKQLPNVLILPSDQRHFIR 547
>gi|299117538|emb|CBN75382.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 696
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L ++ V +GV+S D L L +E +A + T+RL+RLA HLLQQQ +YPL PP
Sbjct: 538 PNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPA 597
Query: 76 ELPVDMECWELHA-QLPVTPHIMILPSDLRYFVK 108
++ H +P TP ++++PS L F +
Sbjct: 598 GSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFAR 631
>gi|168039083|ref|XP_001772028.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676629|gb|EDQ63109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 635
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPE--MTDRLSRLASHLLQQQCYYPLIPPNV 75
P VL + V VG + D+L HL EE + P+ +DR++RLASHLL Q+ +YPL PP
Sbjct: 476 PGVLKVDEVTVGFCTTDILRHLSSEEVSRVPQGASSDRMTRLASHLLSQRSFYPLFPPPQ 535
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D+ L +P I++L S+L FVK L
Sbjct: 536 SVPLDLSVAPESLDLSSSPDILLLSSNLAPFVKVL 570
>gi|157124545|ref|XP_001654098.1| hypothetical protein AaeL_AAEL009905 [Aedes aegypti]
gi|108873944|gb|EAT38169.1| AAEL009905-PA, partial [Aedes aegypti]
Length = 513
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++ I+G+ +G+T+ D++ L +E + P+ D + R +++ + +YPL PP+V
Sbjct: 373 PDPCIVSINGLEIGITTADIIKDLCDDEESGGPK-GDIIKRAFNYMFHHKTFYPLNPPSV 431
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP+DM+ + +P P+IMI P DL+ +VK L
Sbjct: 432 NLPLDMDLLSVFGNIPRVPNIMICPGDLKCYVKEL 466
>gi|195449186|ref|XP_002071963.1| GK22573 [Drosophila willistoni]
gi|194168048|gb|EDW82949.1| GK22573 [Drosophila willistoni]
Length = 616
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++D+ G+ VGVTS D++ HL EFA +RL R +HL Q +YP+ PP
Sbjct: 474 PDPSIVDLDGITVGVTSTDIVSHLLSHEFAL--NAGERLHRAINHLFNQGSFYPMCPPGD 531
Query: 76 E-LPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E + D + +AQL P+I+ILPSD R+F++
Sbjct: 532 ENMCYDSLLAQKYAQLKQLPNILILPSDQRHFIR 565
>gi|449439345|ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 14 SKPRPWVLDISGVVVGVTSVDVLMHLGREEFA---AAPEMTDRLSRLASHLLQQQCYYPL 70
S P P +L+ + + ++D+L HL EE + DRLS LASH+L+Q+ +YPL
Sbjct: 473 SPPNPCILEANQAKIACCTMDILRHLSGEELSRNLTKGGTNDRLSTLASHILRQRSFYPL 532
Query: 71 IPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
PP +P+D + V P I+ILPSD+++FVK +
Sbjct: 533 YPPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVI 572
>gi|444724504|gb|ELW65107.1| Cdc42 effector protein 2 [Tupaia chinensis]
Length = 576
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 51 TDRLSRLASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+DR SR+ H+L Q+ YYPL PP E+ +D E + +AQLPVTP ++I+PS+LRYFVK
Sbjct: 219 SDRFSRILKHILTQRSYYPLYPPQEEMAIDYENFYTYAQLPVTPDVLIIPSELRYFVK 276
>gi|195054929|ref|XP_001994375.1| GH16851 [Drosophila grimshawi]
gi|193892138|gb|EDV91004.1| GH16851 [Drosophila grimshawi]
Length = 603
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++D+ G+ +GV+S DVL HL EFA +R+ R +HL Q +YPL PP
Sbjct: 461 PDPSLVDLDGLTLGVSSTDVLDHLLSYEFAT--NAGERMHRAINHLFNQGSFYPLCPPAD 518
Query: 76 E-LPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E + D + + +AQL P+I+ILPSD R+F++
Sbjct: 519 ENMSYDSQLAQKYAQLKQLPNILILPSDQRHFIR 552
>gi|19075265|ref|NP_587765.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe 972h-]
gi|6015008|sp|O74946.1|DPOA2_SCHPO RecName: Full=DNA polymerase alpha subunit B
gi|3169066|emb|CAA19261.1| DNA polymerase alpha B-subunit [Schizosaccharomyces pombe]
Length = 574
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P + I+ VV GV++ D+L+H REE P + +RL SH+L Q+ +YPL P
Sbjct: 421 PNPCMFSINDVVFGVSTNDILLHTSREELFRLPSHGNLFARLVSHVLHQRHFYPLFPGGS 480
Query: 76 -----ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D+ +L L P I+ILPSDLRYFVK
Sbjct: 481 LEKCNPSNLDIAHLKLGEFLNTMPDILILPSDLRYFVK 518
>gi|195503826|ref|XP_002098816.1| GE23725 [Drosophila yakuba]
gi|194184917|gb|EDW98528.1| GE23725 [Drosophila yakuba]
Length = 609
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G+ +GVTS DV+ HL EFA +R+ R +HL Q +YPL PP +
Sbjct: 470 PDPSLVDLDGITLGVTSTDVVDHLLSHEFAV--NAGERMHRAINHLFHQGSFYPLYPPAD 527
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+FV+
Sbjct: 528 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFVR 561
>gi|16768544|gb|AAL28491.1| GM08365p [Drosophila melanogaster]
Length = 609
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G+ +GVTS DV+ HL EFA +R+ R+ +HL Q +YPL PP +
Sbjct: 470 PDPSLVDLDGLTLGVTSTDVVDHLLSHEFAV--NAGERMHRVINHLFHQGSFYPLYPPAD 527
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+F++
Sbjct: 528 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFIR 561
>gi|302794414|ref|XP_002978971.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
gi|300153289|gb|EFJ19928.1| hypothetical protein SELMODRAFT_110038 [Selaginella moellendorffii]
Length = 590
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 4 LNKLLSEDSDSK----PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT--DRLSRL 57
N + EDS + P P V + V +G + D+L HL EE A P T DR+SRL
Sbjct: 424 FNSFMFEDSSQQISLLPNPSVFRLDEVSIGCCTTDILRHLSSEEAARNPPGTSSDRMSRL 483
Query: 58 ASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+ L+ Q+ +YPL PP + +D+ LP TP I++L SDL FVK
Sbjct: 484 GAQLVGQRSFYPLFPPALGTCLDLAVNPSALDLPCTPDIIVLSSDLVPFVK 534
>gi|302824727|ref|XP_002994004.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
gi|300138166|gb|EFJ04944.1| hypothetical protein SELMODRAFT_138015 [Selaginella moellendorffii]
Length = 590
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 4 LNKLLSEDSDSK----PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT--DRLSRL 57
N + EDS + P P V + V +G + D+L HL EE A P T DR+SRL
Sbjct: 424 FNSFMFEDSSQQISLLPNPSVFRLDEVSIGCCTTDILRHLSSEEAARNPPGTSSDRMSRL 483
Query: 58 ASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+ L+ Q+ +YPL PP + +D+ LP TP I++L SDL FVK
Sbjct: 484 GAQLVGQRSFYPLFPPALGTCLDLAVNPSALDLPCTPDIIVLSSDLVPFVK 534
>gi|195349906|ref|XP_002041483.1| GM10379 [Drosophila sechellia]
gi|194123178|gb|EDW45221.1| GM10379 [Drosophila sechellia]
Length = 609
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G+ +GVTS DV+ HL EFA +R+ R +HL Q +YPL PP +
Sbjct: 470 PDPSLVDLDGLTLGVTSTDVVDHLLSHEFAV--NAGERMHRAINHLFHQGSFYPLYPPAD 527
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+FV+
Sbjct: 528 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFVR 561
>gi|212274797|ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
gi|194689050|gb|ACF78609.1| unknown [Zea mays]
gi|413916526|gb|AFW56458.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 626
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G +VD+L L +E + P + DR+ RLASH+L+QQ YYPL PP
Sbjct: 482 NPCLFGSNEINFGCCTVDILKQLSGQEISRKPPGGKPGDRIGRLASHILKQQSYYPLYPP 541
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D+ + ++P P +++LPSDL FVK L
Sbjct: 542 APGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVL 578
>gi|413916525|gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
Length = 551
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G +VD+L L +E + P + DR+ RLASH+L+QQ YYPL PP
Sbjct: 407 NPCLFGSNEINFGCCTVDILKQLSGQEISRKPPGGKPGDRIGRLASHILKQQSYYPLYPP 466
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D+ + ++P P +++LPSDL FVK L
Sbjct: 467 APGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVL 503
>gi|194745768|ref|XP_001955359.1| GF16278 [Drosophila ananassae]
gi|190628396|gb|EDV43920.1| GF16278 [Drosophila ananassae]
Length = 601
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G+ +GVTS DV+ HL E AA +R+ R +HL Q +YP+ PP +
Sbjct: 462 PDPSIVDLDGITLGVTSTDVVDHLLSHELAA--NAGERMHRAINHLFHQGSFYPIYPPAD 519
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++P D + +AQ+ P+++ILP D R+F++
Sbjct: 520 EDMPYDSQLALKYAQIRQLPNVLILPGDQRHFIR 553
>gi|198451445|ref|XP_001358373.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
gi|198131493|gb|EAL27512.2| GA19232 [Drosophila pseudoobscura pseudoobscura]
Length = 609
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++D+ G+ +GVTS DV+ HL EFAA +R+ R +HL Q +YP+ PP
Sbjct: 467 PDPSMVDLDGITLGVTSTDVVDHLLSHEFAA--NAGERMHRAINHLFNQGSFYPMYPPGD 524
Query: 76 E-LPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E + D + +AQL P++++LP D R+F++
Sbjct: 525 ENMSYDTQLALKYAQLRQLPNVLLLPGDQRHFIR 558
>gi|384488367|gb|EIE80547.1| hypothetical protein RO3G_05252 [Rhizopus delemar RA 99-880]
Length = 512
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P + ++G VV + ++DVL L ++E + +DR SRL HL+QQ YYPL P E
Sbjct: 418 PSSISVNGHVVSLANIDVLFRLAKQEIFKSSVHSDRFSRLVQHLIQQHTYYPLFPHAEED 477
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+D L Q+ P I+I+PS +YFVKA+
Sbjct: 478 SIDSSRL-LDIQISWKPDILIIPSQFKYFVKAV 509
>gi|254200|gb|AAB22992.1| DNA polymerase alpha primase 73 kda subunit [Drosophila
melanogaster, Peptide, 653 aa]
Length = 653
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G +GVTS DV+ HL EFA +R+ R +HL Q +YPL PP +
Sbjct: 514 PDPSLVDLDGFTLGVTSTDVVDHLLSHEFAV--NAGERMHRATNHLFHQGSFYPLYPPAD 571
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+F++
Sbjct: 572 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFIR 605
>gi|221459889|ref|NP_733206.3| DNA polymerase alpha 73kD [Drosophila melanogaster]
gi|229462839|sp|Q9VB62.2|DPOA2_DROME RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase alpha 73 kDa subunit
gi|220903233|gb|AAF56680.4| DNA polymerase alpha 73kD [Drosophila melanogaster]
Length = 609
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G +GVTS DV+ HL EFA +R+ R +HL Q +YPL PP +
Sbjct: 470 PDPSLVDLDGFTLGVTSTDVVDHLLSHEFAV--NAGERMHRAINHLFHQGSFYPLYPPAD 527
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+F++
Sbjct: 528 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFIR 561
>gi|422293484|gb|EKU20784.1| DNA polymerase alpha subunit B, partial [Nannochloropsis gaditana
CCMP526]
Length = 223
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P ++ V VGVT+ D+L HL +E + P +RL+RLA+HLLQQQ ++PL PP +
Sbjct: 78 NPSFFTVNEVAVGVTTNDILCHLSGDEVSYNP--GNRLARLAAHLLQQQSFFPLFPPPAD 135
Query: 77 LPVDMECWEL-HAQLPVTPHIMILPSDLRYFVK 108
++ H ++P+TP +++LPS L FVK
Sbjct: 136 GQAQLDLRHADHWRMPITPDVLLLPSKLTPFVK 168
>gi|195146190|ref|XP_002014070.1| GL24481 [Drosophila persimilis]
gi|194103013|gb|EDW25056.1| GL24481 [Drosophila persimilis]
Length = 259
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++D+ G+ +GVTS DV+ HL EFAA +R+ R +HL Q +YP+ PP
Sbjct: 117 PDPSMVDLDGITLGVTSTDVVDHLLSHEFAA--NAGERMHRAINHLFNQGSFYPIYPPGD 174
Query: 76 E-LPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E + D + +AQL P++++LP D R+F++
Sbjct: 175 EDMSYDTQLALKYAQLRQLPNVLLLPGDQRHFIR 208
>gi|195553448|ref|XP_002076668.1| GD15188 [Drosophila simulans]
gi|194202279|gb|EDX15855.1| GD15188 [Drosophila simulans]
Length = 307
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G+ +GVTS DV+ HL EFA +R+ R +HL Q +YPL PP +
Sbjct: 168 PDPSLVDLDGLTLGVTSTDVVDHLLSHEFAV--NAGERMHRAINHLFHQGSFYPLYPPAD 225
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+FV+
Sbjct: 226 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFVR 259
>gi|260822499|ref|XP_002606639.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
gi|229291983|gb|EEN62649.1| hypothetical protein BRAFLDRAFT_120094 [Branchiostoma floridae]
Length = 521
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 51 TDRLSRLASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+DRL RL H+L QQ YYPL PP+ ++ +D E +E +L TP ++I+PSDLRYFVK
Sbjct: 412 SDRLGRLIKHILTQQSYYPLYPPSEDVNIDYEHYEQFCRLQATPDVLIIPSDLRYFVK 469
>gi|145352257|ref|XP_001420468.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580702|gb|ABO98761.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 248
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 2 SSLNKLLSEDSDSKPR------PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLS 55
+SL+ +S D+ R P I+G+V S DVL HL +E + DRL+
Sbjct: 103 ASLDAYVSADAARAKRAFSASNPGTFTINGIVFSACSHDVLKHLSAQEISKGFVPKDRLA 162
Query: 56 RLASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
RLA H+L Q C YPL PP+ +D E TP ++I+PSDL+ F +
Sbjct: 163 RLAKHVLTQGCAYPLYPPDASACLDARYGE-DLTFKQTPDVLIMPSDLKTFAE 214
>gi|198420427|ref|XP_002131276.1| PREDICTED: similar to Polymerase (DNA directed), alpha 2 (70kD
subunit) [Ciona intestinalis]
Length = 535
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 26 VVVGVTSVDVLMHLGREEFA-AAPEMTDRLSRLASHLLQQQCYYPLIPPNVELPVDMECW 84
+ +GV+S D+L HL E + +A + +DR+ RL SH+L Q +YPL PP+ + +D+
Sbjct: 412 IKIGVSSTDILFHLVATEISRSATKKSDRIGRLVSHILNQGSFYPLYPPDKSVNLDLLSS 471
Query: 85 ELHAQLPVTPHIMILPSDLRYFVK 108
E H ++P +++LPS+L++F+K
Sbjct: 472 EDHGRIPPDVDLVLLPSNLQHFIK 495
>gi|302824723|ref|XP_002994002.1| hypothetical protein SELMODRAFT_23326 [Selaginella moellendorffii]
gi|300138164|gb|EFJ04942.1| hypothetical protein SELMODRAFT_23326 [Selaginella moellendorffii]
Length = 241
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 4 LNKLLSEDSDSK----PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT--DRLSRL 57
N + EDS + P P V + V +G + D+L HL EE A P T DR+SRL
Sbjct: 102 FNSFMFEDSSQQISLLPNPSVFRLDEVSIGCCTTDILRHLSSEEAARNPPGTSSDRMSRL 161
Query: 58 ASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+ L+ Q+ +YPL PP + +++ P TP I++L SDL FVK
Sbjct: 162 GAQLVGQRGFYPLFPPALGTCLNLAVNPSALDFPCTPDIIVLSSDLVPFVK 212
>gi|213405225|ref|XP_002173384.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
gi|212001431|gb|EEB07091.1| DNA polymerase alpha B-subunit [Schizosaccharomyces japonicus
yFS275]
Length = 570
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P V I+ G+++ D+L+H+ +EE +P+ T+ +RLAS+++QQ+ +YPL P
Sbjct: 423 PNPSVFSINDTRFGISTNDILLHMSKEELFRSPKHTNLFTRLASNIIQQRHFYPLFPGGS 482
Query: 76 -----ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D+ L + VTP I+ILPS+L +F K
Sbjct: 483 MEKGNSSNLDISHLPLGEFINVTPKILILPSELHHFAK 520
>gi|194907522|ref|XP_001981570.1| GG11537 [Drosophila erecta]
gi|190656208|gb|EDV53440.1| GG11537 [Drosophila erecta]
Length = 609
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ G+ +GVTS V+ HL EFA +R+ R +HL Q +YPL PP +
Sbjct: 470 PDPSLVDLDGITLGVTSTYVVDHLLSHEFAV--NAGERMHRAINHLFHQGSFYPLYPPAD 527
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+FV+
Sbjct: 528 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFVR 561
>gi|222616877|gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
Length = 625
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G ++D+L HL EE + P + DR+ R+ +H+L+QQ YYPL PP
Sbjct: 481 NPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPP 540
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D ++ P +++LPSDL FVK L
Sbjct: 541 PAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVL 577
>gi|218186644|gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
Length = 625
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G ++D+L HL EE + P + DR+ R+ +H+L+QQ YYPL PP
Sbjct: 481 NPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPP 540
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D ++ P +++LPSDL FVK L
Sbjct: 541 PAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVL 577
>gi|115487992|ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
gi|113648990|dbj|BAF29502.1| Os12g0242900, partial [Oryza sativa Japonica Group]
Length = 400
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G ++D+L HL EE + P + DR+ R+ +H+L+QQ YYPL PP
Sbjct: 256 NPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPP 315
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D ++ P +++LPSDL FVK L
Sbjct: 316 PAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVL 352
>gi|108862394|gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
gi|215693905|dbj|BAG89104.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G ++D+L HL EE + P + DR+ R+ +H+L+QQ YYPL PP
Sbjct: 224 NPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPP 283
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D ++ P +++LPSDL FVK L
Sbjct: 284 PAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVL 320
>gi|108862395|gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
sativa Japonica Group]
Length = 339
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G ++D+L HL EE + P + DR+ R+ +H+L+QQ YYPL PP
Sbjct: 195 NPSLFSCNEIHFGCCTMDILKHLSGEEISRKPPGEKHGDRIGRICTHILKQQSYYPLYPP 254
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D ++ P +++LPSDL FVK L
Sbjct: 255 PAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVL 291
>gi|242095348|ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
gi|241916387|gb|EER89531.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
Length = 626
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM---TDRLSRLASHLLQQQCYYPLIPP 73
P + + + G +VD+L L EE + P + DR+ RLASH+L+QQ YYPL P
Sbjct: 482 NPCLFSSNEIHFGCCTVDILKQLSGEEISRKPPVGKPADRIGRLASHILKQQSYYPLYPS 541
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D + ++ P +++LPSDL FVK L
Sbjct: 542 AAGVPLDFSLAKEALEISSAPDVLLLPSDLAPFVKVL 578
>gi|347971810|ref|XP_313675.5| AGAP004392-PA [Anopheles gambiae str. PEST]
gi|333469039|gb|EAA09104.6| AGAP004392-PA [Anopheles gambiae str. PEST]
Length = 729
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAA--------PEMTDRLSRLASHLLQQQCY 67
P P V ++ GV +G+T+VDV+ HL E A P D++ R HL Q +
Sbjct: 569 PDPCVFNLEGVEIGITTVDVIKHLIESECTVANVTIGSAPPLGGDKIKRAYGHLFHQASF 628
Query: 68 YPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
YPL PP ++P+D++ +L P+IMI PS L +V+ +
Sbjct: 629 YPLNPPPEDVPLDVDMLNEFGRLSRVPNIMICPSALNRYVREI 671
>gi|326436074|gb|EGD81644.1| hypothetical protein PTSG_02360 [Salpingoeca sp. ATCC 50818]
Length = 651
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + VTS DVL L R A+ TDR+ RL +HL +Q+ +YPL PP+ ++
Sbjct: 506 PSTFMINELTFAVTSNDVLFQLSRSG-TASNMHTDRMQRLVNHLFEQRSFYPLDPPHEQV 564
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D + + +LPVTP ++ILPS LR+FV+
Sbjct: 565 HLDYAHID-NLKLPVTPDVIILPSTLRHFVR 594
>gi|326487588|dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G +VD+L L +E + P + DR+ RLA+H+++QQ YYPL PP
Sbjct: 481 NPSLFSSNEIQFGCCTVDILKQLSGDEISRKPPGGKAADRIGRLATHIVKQQSYYPLYPP 540
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D + ++P P +++LPSDL VK L
Sbjct: 541 AAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSVKVL 577
>gi|223998634|ref|XP_002288990.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976098|gb|EED94426.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 719
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L I+ + VGVTS DVL H+ +E A RL+R+A HL+QQ+ YYPL P
Sbjct: 570 NPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLFPAAKG 629
Query: 77 LPVDM---ECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+D+ + WE +PV P I+I+PS L F + +
Sbjct: 630 ACLDLSRSDEWE----MPVQPDILIVPSKLTTFARKV 662
>gi|312374432|gb|EFR21988.1| hypothetical protein AND_15916 [Anopheles darlingi]
Length = 575
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P + I G+ +GVT+VD + HL E +A + D++ R H+ Q +YPL PP
Sbjct: 405 PDPCLFSIEGLEIGVTTVDTVRHLLDGECCSA-DAGDKIKRAFGHIFHQASFYPLNPPPE 463
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
++PVD++ +L P++M+ PS L FV+ +
Sbjct: 464 DMPVDVDMLNEFGRLTRVPNVMVCPSSLNRFVREI 498
>gi|324508966|gb|ADY43781.1| DNA polymerase alpha subunit B [Ascaris suum]
Length = 607
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 6 KLLSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAP--EMTDRLSRLASHLLQ 63
K LSE+ P + I+GV +T+ +++ +GREE +P E DR++R+ASHL++
Sbjct: 448 KSLSENILFGADPSQISIAGVQFALTNSEIMQVMGREEIHRSPTAENEDRMARIASHLVR 507
Query: 64 QQCYYPLIPPNVELPVDMECWEL--HAQLPVTPHIMILPSDLRYFVKAL 110
Q+ YPL PP V V C E L V PH+MI+PS L +KA+
Sbjct: 508 QRSLYPLYPPPVN--VAQRCAETIRRCALNVIPHVMIVPSLLAPMIKAV 554
>gi|347971812|ref|XP_003436801.1| AGAP004392-PB [Anopheles gambiae str. PEST]
gi|333469040|gb|EGK97159.1| AGAP004392-PB [Anopheles gambiae str. PEST]
Length = 616
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF--------AAAPEMTDRLSRLASHLLQQQCY 67
P P V ++ GV +G+T+VDV+ HL E +A P D++ R HL Q +
Sbjct: 456 PDPCVFNLEGVEIGITTVDVIKHLIESECTVANVTIGSAPPLGGDKIKRAYGHLFHQASF 515
Query: 68 YPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
YPL PP ++P+D++ +L P+IMI PS L +V+ +
Sbjct: 516 YPLNPPPEDVPLDVDMLNEFGRLSRVPNIMICPSALNRYVREI 558
>gi|430812479|emb|CCJ30096.1| unnamed protein product [Pneumocystis jirovecii]
Length = 629
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 8 LSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCY 67
L ++ P P + ++ V++G++S D+LM L + E +P ++ L+RL+ H++QQ+ +
Sbjct: 461 LEKNIKCMPNPALFSLNEVIIGISSNDILMSLSKSEIIKSPLYSNALARLSYHVIQQRHF 520
Query: 68 YPLIPPNVE------LPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
YPL P +D+ L V P I+ILPSDL+YF K +
Sbjct: 521 YPLFPGTAYESLIDGANLDIAFMGLGEFSDVLPDILILPSDLQYFAKII 569
>gi|146189563|emb|CAM91783.1| hypothetical protein [Platynereis dumerilii]
Length = 139
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPL 70
P ++I G+V+G+TS D++ HLG EE + +P DRLSRLA H++ QQ YYPL
Sbjct: 87 PSTINIEGIVLGLTSTDIMFHLGAEEISYSPGSADRLSRLAEHVITQQNYYPL 139
>gi|357160336|ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
distachyon]
Length = 625
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPP 73
P + + + G + D+L L +E + P + DR+ RLA H+L+QQ YYPL PP
Sbjct: 481 NPSIFSSNEIHFGCCTTDILKQLSGDEISRKPPGGKPADRIGRLAKHILKQQSYYPLYPP 540
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D + ++ P +++LPSDL FVK L
Sbjct: 541 AAGVPMDFSLAKEAFEISSPPDVLLLPSDLAPFVKVL 577
>gi|170030754|ref|XP_001843253.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867929|gb|EDS31312.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 629
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P V+ I+G+ V +T+VDV+ L E + AP D++ R +++ + +YPL PP
Sbjct: 489 PDPCVVSINGMHVAITTVDVVRDLSEAELSVAPS-GDKIKRAFNYMFHHRSFYPLNPPPE 547
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+P+D++ LP P++MI P DL+ +V+
Sbjct: 548 SVPLDVDLLHHFGTLPRVPNVMICPGDLKPYVR 580
>gi|170030752|ref|XP_001843252.1| DNA polymerase subunit alpha B [Culex quinquefasciatus]
gi|167867928|gb|EDS31311.1| DNA polymerase subunit alpha B [Culex quinquefasciatus]
Length = 417
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P V+ I+G+ V +T+VDV+ L E + AP D++ R +++ + +YPL PP
Sbjct: 277 PDPCVVSINGMHVAITTVDVVRDLSEAELSVAPS-GDKIKRAFNYMFHHRSFYPLNPPPE 335
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+P+D++ LP P++MI P DL+ +V+
Sbjct: 336 SVPLDVDLLHHFGTLPRVPNVMICPGDLKPYVR 368
>gi|242003174|ref|XP_002422639.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
gi|212505440|gb|EEB09901.1| DNA polymerase subunit alpha B, putative [Pediculus humanus
corporis]
Length = 460
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 17/95 (17%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P + + VV GVTS D RLSRLA H+L Q+ +YPL P
Sbjct: 345 PDPCLFSLDDVVFGVTSTD---------------DGGRLSRLAKHILHQKSFYPLAPAK- 388
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
++P+D + H +L V PHI+ILPSDLRYF++ +
Sbjct: 389 DVPLDPTLMD-HVKLDVAPHILILPSDLRYFIQKV 422
>gi|402225765|gb|EJU05826.1| DNA polymerase alpha subunit B [Dacryopinax sp. DJM-731 SS1]
Length = 570
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 23 ISGVVVGVTSVDVLMHLGREEFAAAPEMT----DRLSRLASHLLQQQCYYPLIPPNVELP 78
++GV + +SVDVL HL +EEF E + D ++ LA H+L Q+ +YP+ PP ++
Sbjct: 422 MNGVTIAASSVDVLFHLRKEEFVKRIEGSTTPLDPMASLAGHVLSQKSFYPIFPPTKDVS 481
Query: 79 VDME----CWELHAQLPVTPHIMILPSDLRYFVKAL 110
D+ C+E P P +++LPS L+ F K +
Sbjct: 482 SDVNLDVLCYEFLRIGPTAPAVLVLPSMLKQFHKVV 517
>gi|255086299|ref|XP_002509116.1| DNA polymerase [Micromonas sp. RCC299]
gi|226524394|gb|ACO70374.1| DNA polymerase [Micromonas sp. RCC299]
Length = 658
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 2 SSLNKLLSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFA------AAPEMTDRLS 55
S K D + P P I+GV V V + DVL HL E A A +DR++
Sbjct: 479 SDGKKGAGVDVIATPNPGTFTINGVRVAVCTHDVLRHLSAAEAAREDKSSGAGPSSDRMA 538
Query: 56 RLASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
RLASHL Q+ YPL PP +D H + TP +++LPSDL+ F K
Sbjct: 539 RLASHLPGQRSAYPLFPPAHGACLDASLAS-HLAMEKTPDVLVLPSDLQPFAK 590
>gi|308809287|ref|XP_003081953.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
gi|116060420|emb|CAL55756.1| DNA polymerase alpha subunit B family (ISS) [Ostreococcus tauri]
Length = 650
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 SSLNKLLSEDSD--SKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLAS 59
+S+++ +++ S S P +I+GVV VDVL HL E + +RL RLA
Sbjct: 483 ASVDEFVTDRSRVVSVSNPGTFEINGVVFSACGVDVLKHLSAREISQGHAPKERLGRLAG 542
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+++Q YPL PP+V +D + A P ++ILPSDL+ F +
Sbjct: 543 HVVRQAHAYPLYPPDVSTCLDARHGDALA-FERAPDVLILPSDLKAFAE 590
>gi|384248689|gb|EIE22172.1| DNA polymerase alpha, subunit B [Coccomyxa subellipsoidea C-169]
Length = 552
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++ +V GV S D L + +E A P DR++ LA H++ Q Y+PL PP
Sbjct: 377 PNPATFRLNELVFGVASPDFLKQVSSQEIAKGP-TPDRMAALAGHIIGQGSYFPLYPP-- 433
Query: 76 ELPVDMECWELHAQ--LPVTPHIMILPSDLRYFVKAL 110
P M L A+ LP TP ++ILPSDL F K++
Sbjct: 434 -APGSMLDASLGAELDLPCTPDVLILPSDLAAFAKSV 469
>gi|225425850|ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product [Vitis vinifera]
Length = 623
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAP---EMTDRLSRLASHLLQQQCYYPLIPPN 74
P + D + V VG +VDV+ L E + P DR++ +A+H+L Q+ +YPL P
Sbjct: 478 PGMFDANEVKVGCCTVDVIKQLSGEMISRNPTDGSSRDRMTTIANHILSQRSFYPLYPLA 537
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+P+D ++ P ++ILPSDL FVK L
Sbjct: 538 EGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVL 573
>gi|303284707|ref|XP_003061644.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456974|gb|EEH54274.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 417
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT-----------DRLSRLASHLLQQ 64
P P V I+GV + DVL HL E A P DR+SRLA+HL Q
Sbjct: 249 PNPGVFSINGVTFAACTQDVLRHLSAAEAAREPASGGAGGGAGGAAPDRMSRLAAHLPGQ 308
Query: 65 QCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
YPL P +D H ++ VTP ++++PSDL F K
Sbjct: 309 SSAYPLFPAPAGACLDAS-LAAHLEMDVTPDVLLVPSDLNPFAK 351
>gi|409040116|gb|EKM49604.1| hypothetical protein PHACADRAFT_166969 [Phanerochaete carnosa
HHB-10118-sp]
Length = 567
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 18/115 (15%)
Query: 14 SKPRPWVLDISGVVVGVTSVDVLMHLGREEF-------AAAP------EMTDRLSRLASH 60
S P P L ++GV V+SVDVL HL +EEF ++AP +D +++L H
Sbjct: 417 SIPNPSQLSLNGVSFAVSSVDVLFHLRKEEFFKPMSEISSAPLAENETPASDAMAKLCRH 476
Query: 61 LLQQQCYYPLIPPNVELPVDME-----CWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LQQ+ +YP+ PP ++L ++ +L P ++ILPS L+ F K +
Sbjct: 477 VLQQRSFYPIFPPPLDLVNEVNLDVTHSGKLKLAEDTAPLVLILPSKLKQFHKTV 531
>gi|390603438|gb|EIN12830.1| DNA polymerase alpha subunit B [Punctularia strigosozonata
HHB-11173 SS5]
Length = 580
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 2 SSLNKLLSEDSDSK--PRPWVLDISGVVVGVTSVDVLMHLGREEF----------AAAPE 49
+ L+ LS DS + P P I+GV G TSVDVL HL +EEF
Sbjct: 405 AELSSHLSTDSRIRLLPNPCRFSINGVSFGTTSVDVLFHLRKEEFLKRCAEEVDPIGESG 464
Query: 50 MTDRLSRLASHLLQQQCYYPLIPPNVELPVDMECWELHAQL----PVTPHIMILPSDLRY 105
D ++ L HLL Q+ +YP+ P ++ ++ H+ L P ++I+PS L++
Sbjct: 465 ANDAMANLCRHLLHQRSFYPIFPVPFDMAHEVNLDVSHSALLEIKDSAPDVLIVPSRLKH 524
Query: 106 FVKAL 110
F K L
Sbjct: 525 FSKVL 529
>gi|393909132|gb|EFO26626.2| DNA polymerase alpha subunit B family protein [Loa loa]
Length = 592
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAA--APEMTDRLSRLASHLLQQQCYYPLIPP 73
P P ++ I+G+ +T+ +++ HLGR+E + E DR+SRL L +Q+ YPL P
Sbjct: 445 PDPAIVRIAGIEFAITASEIIQHLGRDEIGHFDSHEDQDRISRLVRDLFRQRSLYPLYPA 504
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
++ + L V PHI+ILPS L VK +
Sbjct: 505 AEDVTYRLREAVERTSLSVIPHIIILPSILAPTVKVV 541
>gi|312068913|ref|XP_003137436.1| DNA polymerase alpha subunit B family protein [Loa loa]
Length = 608
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAA--APEMTDRLSRLASHLLQQQCYYPLIPP 73
P P ++ I+G+ +T+ +++ HLGR+E + E DR+SRL L +Q+ YPL P
Sbjct: 461 PDPAIVRIAGIEFAITASEIIQHLGRDEIGHFDSHEDQDRISRLVRDLFRQRSLYPLYPA 520
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
++ + L V PHI+ILPS L VK +
Sbjct: 521 AEDVTYRLREAVERTSLSVIPHIIILPSILAPTVKVV 557
>gi|428184561|gb|EKX53416.1| DNA polymerase alpha subunit B, partial [Guillardia theta CCMP2712]
Length = 731
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P + I+ VVVGVT+ D++ H+ E + + DR+SR+ +HL+QQ+ +YPL PP
Sbjct: 468 PCMFRINEVVVGVTTTDIVRHICGCESSIS--NGDRISRVINHLIQQKSFYPLFPPAEGA 525
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+ M + H + TP ++I+PS L + K
Sbjct: 526 QLAMSNYH-HLEFQNTPDVLIVPSHLCAYAK 555
>gi|429851305|gb|ELA26503.1| DNA polymerase alpha primase associated subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 724
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 15/106 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPN--V 75
P L ++ +V+G++S D+L L EE AA P T+ LSRL+ HLL+Q+ ++PL PP
Sbjct: 564 PMTLSMNEMVMGISSQDILWQLKHEELAARPSDTNPLSRLSRHLLEQRHFFPLFPPTDRQ 623
Query: 76 ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ +L + V P ++I+PS L F K
Sbjct: 624 KLPKTGTEEGMPPGAMLDLSYLKLGEMVNVRPDVLIVPSFLPPFAK 669
>gi|343173004|gb|AEL99205.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 140
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPE---MTDRLSRLASHLLQQQCYYPLIPP 73
P + D V +G SVD+L HL EE + P+ DRLSRL +H++ Q +YPL PP
Sbjct: 69 NPGIFDADKVTIGCCSVDILKHLSGEEISRNPKDGTSKDRLSRLGTHIIGQHSFYPLYPP 128
Query: 74 NVELPVDM 81
+P+D
Sbjct: 129 AEGVPLDF 136
>gi|348683854|gb|EGZ23669.1| hypothetical protein PHYSODRAFT_480522 [Phytophthora sojae]
Length = 629
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLI--PPN 74
P I+GVV G +++DV++ L E F A +RL RL ++ Q+ YYP+ PP+
Sbjct: 479 PSTFSINGVVFGTSALDVVVQLSSNELFRAQSRNHNRLLRLCEEIVDQRSYYPMFPPPPS 538
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYF 106
E P+D+ + Q TP I++LPS L F
Sbjct: 539 SEAPIDLR-YMKQFQFEQTPDILLLPSILNRF 569
>gi|17554432|ref|NP_499268.1| Protein DIV-1 [Caenorhabditis elegans]
gi|21431778|sp|Q21625.3|DPOA2_CAEEL RecName: Full=DNA polymerase alpha subunit B; AltName:
Full=Division delayed protein 1
gi|18136205|emb|CAA83467.2| Protein DIV-1 [Caenorhabditis elegans]
Length = 581
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF--AAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P + ISGV V +TS + + L EF +A E DR++RL+SHLL QQC YPL P
Sbjct: 441 PCIFRISGVEVAMTSSEPIQALSNTEFHRSANQENIDRVARLSSHLLTQQCMYPLEP--T 498
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDL 103
E+P M + TPHI+ P+ L
Sbjct: 499 EVPASMGDLLDVCCIGSTPHIVFAPTKL 526
>gi|440793110|gb|ELR14305.1| DNAdirected DNA polymerase subunit, putative [Acanthamoeba
castellanii str. Neff]
Length = 256
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRL-SRLASHLLQQQCYYPLIPPNV 75
P ++ I+G+ +G+TS DVL + R+E + +R +RLA HLL+Q +YP+ PP
Sbjct: 117 NPSLVRINGLALGLTSHDVLADIARQELVKGDHLEERHPARLAGHLLKQGSFYPVHPPAP 176
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+P+D +LP P ++++PS L F +
Sbjct: 177 GVPLD-STQLFKTELPYVPDVLVVPSCLSPFAR 208
>gi|325180869|emb|CCA15279.1| DNA polymerase subunit alpha B putative [Albugo laibachii Nc14]
Length = 624
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAP--EMTDRLSRLASHLLQQQCYYPLIPPN- 74
P I+ V+ GV+S+DV++ L E AP + ++RL RL+ ++ Q+ + P PP+
Sbjct: 458 PCTFSINNVLFGVSSLDVILELSSNELYRAPATQQSNRLLRLSEQVITQKSFCPCFPPSS 517
Query: 75 -VELPVDM---ECWELHAQLPVTPHIMILPSDLRYFV 107
E+ +D+ +C++LH TP I+ILPS L F
Sbjct: 518 QTEMSLDLRFQKCFQLHR----TPDILILPSILSRFT 550
>gi|402593974|gb|EJW87901.1| DNA polymerase alpha subunit B family protein [Wuchereria
bancrofti]
Length = 598
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAP--EMTDRLSRLASHLLQQQCYYPLIPP 73
P P ++ I+G+ VT+ +++ HLGR+E + E DR+SRL L +Q+ YPL P
Sbjct: 451 PDPAIVRIAGIEFAVTASEIIQHLGRDEIGHSDSCEDHDRVSRLVRDLFRQRSLYPLYPA 510
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
++ + L PH+ ILPS L VK +
Sbjct: 511 AHDITYRLRQAIERTSLSAIPHVTILPSVLAPTVKVV 547
>gi|353237594|emb|CCA69563.1| related to POL12 (DNA-directed DNA polymerase alpha)
[Piriformospora indica DSM 11827]
Length = 487
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF------AAAPEMTDRLSRLASHLLQQQCYYP 69
P P I V VTSVDVL HL R+ P D++S L S +L+Q+ +YP
Sbjct: 331 PNPCTFTIDHVRFSVTSVDVLFHLQRQLLRKKVIPTGTPPPIDQMSILGSCVLEQRSFYP 390
Query: 70 LIPPNVELPVDMECWELHAQL----PVTPHIMILPSDLRYFVKAL 110
L P EL D+ H++L V P ++ILPS+L F K +
Sbjct: 391 LFPAEPELHADVNLDVSHSELLKLEDVAPDVLILPSNLGKFHKVV 435
>gi|426195866|gb|EKV45795.1| hypothetical protein AGABI2DRAFT_179299 [Agaricus bisporus var.
bisporus H97]
Length = 588
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPE-------------MTDRLSRLASHLL 62
P P I+ V G SVDVL HL +EEF TD ++ HLL
Sbjct: 429 PNPSRFKINDVSFGACSVDVLFHLRKEEFLKLGREVDPVLPVHEDDVGTDVMANTCRHLL 488
Query: 63 QQQCYYPLI--PPNVELPVDMECWE------LHAQLPVTPHIMILPSDLRYFVK 108
QQ+ +YP+ PP + V+M+ + P P ++ILPS L++FVK
Sbjct: 489 QQRSFYPIFPTPPGLAHEVNMDVSHSDGLRLVDGDNPNPPDVLILPSKLKHFVK 542
>gi|170576661|ref|XP_001893716.1| DNA polymerase alpha subunit B family protein [Brugia malayi]
gi|158600101|gb|EDP37436.1| DNA polymerase alpha subunit B family protein [Brugia malayi]
Length = 581
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAP--EMTDRLSRLASHLLQQQCYYPLIPP 73
P P ++ I+G+ VT+ +++ HLGR+E + E DR+SRL L +Q+ YPL P
Sbjct: 434 PDPAIVRIAGIEFAVTASEIIQHLGRDEIGHSDSCEDHDRMSRLVRDLFRQRSLYPLYPA 493
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
++ + L PH+ I+PS L VK +
Sbjct: 494 AHDITYRLRQAIERTSLSAIPHVTIMPSVLAPTVKVV 530
>gi|403172302|ref|XP_003331441.2| hypothetical protein PGTG_12763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169793|gb|EFP87022.2| hypothetical protein PGTG_12763 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 322
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF---------------AAAPEMTDRLSRLASH 60
P P ++ I+ V++G+ +VDVLM L +EEF P T+ + R H
Sbjct: 146 PNPSIISINEVIIGINNVDVLMPLKKEEFFKQATVVVDEETAQEGTDPNATNVICRACRH 205
Query: 61 LLQQQCYYPLIPPNV-----ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+++Q+ +YPL P + + +D+ +L V I+ILP++ FVK++
Sbjct: 206 VMRQRSFYPLFPHAIGIGMDAINLDVTHLDLLKHDTVGADILILPTNFTAFVKSI 260
>gi|331249357|ref|XP_003337296.1| hypothetical protein PGTG_18795 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309316286|gb|EFP92877.1| hypothetical protein PGTG_18795 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 192
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 20/115 (17%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF---------------AAAPEMTDRLSRLASH 60
P P ++ I+ V++G+ +VDVLM L +EEF P T+ + R H
Sbjct: 65 PNPSIISINEVIIGINNVDVLMPLKKEEFFKQATVVVDEETAQEGTDPNATNVICRACRH 124
Query: 61 LLQQQCYYPLIPPNV-----ELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+++Q+ +YPL P + + +D+ +L V I+ILP++ FVK++
Sbjct: 125 VMRQRSFYPLFPHAIGIGMDAINLDVTHLDLLKHDTVGADILILPTNFTAFVKSI 179
>gi|406694680|gb|EKC98004.1| alpha DNA polymerase [Trichosporon asahii var. asahii CBS 8904]
Length = 495
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPE-------------MTDRLSRLASHL 61
P P ++ VV+ +SVD L HL REE F A E D ++ L H+
Sbjct: 326 PNPCTFSLNEVVISTSSVDTLFHLRREELFQRAEEAEPDPSTPVNRNPQGDAMANLVRHV 385
Query: 62 LQQQCYYPLIP-PNV---ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
L Q+ +YPL P P E+ +D+ W+ + P ++ILPS LR+F K
Sbjct: 386 LGQRSFYPLFPAPEALAHEVNLDVTHWDQMSLGDTAPDVLILPSKLRHFSK 436
>gi|401884944|gb|EJT49076.1| alpha DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 495
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPE-------------MTDRLSRLASHL 61
P P ++ VV+ +SVD L HL REE F A E D ++ L H+
Sbjct: 326 PNPCTFSLNEVVISTSSVDTLFHLRREELFQRAEEAEPDPSTPVNRNPQGDAMANLVRHV 385
Query: 62 LQQQCYYPLIP-PNV---ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
L Q+ +YPL P P E+ +D+ W+ + P ++ILPS LR+F K
Sbjct: 386 LGQRSFYPLFPAPEALAHEVNLDVTHWDQMSLGDTAPDVLILPSKLRHFSK 436
>gi|393233321|gb|EJD40894.1| DNA polymerase alpha, subunit B [Auricularia delicata TFB-10046
SS5]
Length = 529
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF----AAAPEMTDRLSRLASHLLQQQCYYPLI 71
P P V I G+ V TSVDVL + +EEF +A D + L H+L+Q+ +YPL
Sbjct: 391 PNPCVTTIGGLRVAATSVDVLFQIKKEEFVKDLSAGGGKADSFANLGRHILEQRSFYPLF 450
Query: 72 PP---NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
P + E+ +D+ EL P +++LPS F K
Sbjct: 451 PAPRDDNEVNLDVTHSELLGIAAPAPDVLVLPSKFVQFHK 490
>gi|392579381|gb|EIW72508.1| hypothetical protein TREMEDRAFT_66921 [Tremella mesenterica DSM
1558]
Length = 708
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFA------------AAPEMTDRLSRLASHLLQ 63
P P I+ + + ++SVDVL HL REE E+ D ++ L H+L
Sbjct: 537 PNPCTFSINEITISLSSVDVLFHLRREELVQRAEEAEPDSELKGQEVKDPMAGLVRHVLG 596
Query: 64 QQCYYPLIPP----NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
Q+ +YP+ PP E+ +D+ L ++ P ++ILPS LR+F K
Sbjct: 597 QRTFYPIFPPPEVHATEVNLDVTHHVL-LKMSSAPDVLILPSKLRHFSK 644
>gi|343173006|gb|AEL99206.1| DNA polymerase alpha subunit B family protein, partial [Silene
latifolia]
Length = 140
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPE---MTDRLSRLASHLLQQQCYYPLIPP 73
P + D V +G SVD+L HL EE + + +RLSRLA+H++ Q +YPL PP
Sbjct: 69 NPGIFDADKVTIGCCSVDILKHLSGEEISRNHKDGTSKNRLSRLATHIIGQHSFYPLYPP 128
Query: 74 NVELPVDM 81
+P+D
Sbjct: 129 AEGVPLDF 136
>gi|392566032|gb|EIW59208.1| DNA polymerase alpha subunit B [Trametes versicolor FP-101664 SS1]
Length = 530
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 38/133 (28%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF--------------AAAPEMTDRLSRLASHL 61
P P ++GV V +S+DVL HL +EEF A++PE D ++ L H+
Sbjct: 355 PNPARFTLNGVHVAASSIDVLFHLRKEEFFKRAAEVDPQSQSPASSPEGPDAMANLCRHI 414
Query: 62 LQQQCYYPLIPPNVELPVDMECWELH------------------------AQLPVTPHIM 97
LQQ+ +YP+ P ++L D+ H A+ P ++
Sbjct: 415 LQQRSFYPIFPVPLDLAHDVNLDVTHSDMMYLCPQEDESEEDDVDAQDDPARARCAPDVL 474
Query: 98 ILPSDLRYFVKAL 110
++PS L++F K +
Sbjct: 475 VVPSRLKHFSKVV 487
>gi|403415195|emb|CCM01895.1| predicted protein [Fibroporia radiculosa]
Length = 1294
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPE-------------MTDRLSRLASHLL 62
P P ++G+ +TSVDVL HL +EEF + D ++ H+L
Sbjct: 419 PNPCRFSLNGLSFAITSVDVLFHLRKEEFVKRAQEVDPIPSVSKEEHANDLMTNTCRHIL 478
Query: 63 QQQCYYPLIPPNVELPVDMECWELH----------AQLPVTPHIMILPSDLRYFVKAL 110
QQ+ +YPL P +L ++ H A+ P ++I PS L++FVK +
Sbjct: 479 QQRSFYPLFPAPYDLSHEVNLDVSHSGGLNICTGGAEASFAPDVLITPSRLKHFVKTV 536
>gi|328857937|gb|EGG07051.1| hypothetical protein MELLADRAFT_77651 [Melampsora larici-populina
98AG31]
Length = 636
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 8 LSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEF--------------AAAPEMTDR 53
L+ D P P + I+ VV+G+ +VDVLM + +EEF P D
Sbjct: 450 LTSDIKCLPNPITITINEVVIGINNVDVLMSIRKEEFFKPALVQDDGESNEGPDPNARDI 509
Query: 54 LSRLASHLLQQQCYYPLIPPNV-----ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+SR H+++Q+ +YPL P + ++ +D+ EL PV I+I+P+ F K
Sbjct: 510 ISRACRHVMRQRSFYPLFPATLGAGIDQVNLDVTHHELIKYDPVGADILIMPTSFTAFAK 569
>gi|301114883|ref|XP_002999211.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
gi|262111305|gb|EEY69357.1| DNA polymerase subunit alpha B, putative [Phytophthora infestans
T30-4]
Length = 624
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTD--RLSRLASHLLQQQCYYPLIPP-- 73
P I+GVV G +++DV++ L E A ++ D RL RL ++ Q+ +YP+ PP
Sbjct: 474 PSTFSINGVVFGTSALDVVVQLSSNELYRA-QIRDQHRLLRLCEQVVDQRSFYPMFPPPA 532
Query: 74 NVELPVDMECWELHAQLPVTPHIMILPSDLRYF 106
+ E P+D+ + Q TP I++LPS L F
Sbjct: 533 SSEAPIDLR-YRKQFQFEQTPDILLLPSILNRF 564
>gi|302850345|ref|XP_002956700.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
gi|300258061|gb|EFJ42302.1| hypothetical protein VOLCADRAFT_107349 [Volvox carteri f.
nagariensis]
Length = 1377
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAA-APEMT----DRLSRLASHLLQQQCYYPLI 71
P + + ++VG S D+L L E + AP T +RL LASH+L Q+ YYPL
Sbjct: 585 NPATVSLGPLLVGACSTDLLKALSASEHSRMAPGTTAGGGERLPALASHVLGQRSYYPLY 644
Query: 72 PPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
P +D + QLPV P +++LPSDL F K L
Sbjct: 645 PAPPGTCLDTSHYS-QLQLPVAPDVLLLPSDLAPFAKVL 682
>gi|389744686|gb|EIM85868.1| DNA polymerase alpha subunit B [Stereum hirsutum FP-91666 SS1]
Length = 596
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPE------------MTDRLSRLASHLLQ 63
P P + ++G+ GV+SVDVL HL +E E TD +S HLLQ
Sbjct: 439 PNPCLFSLNGLSFGVSSVDVLFHLRNQEIIKRGEEVDSVATSIGESSTDAMSATCRHLLQ 498
Query: 64 QQCYYPLIPPNVELPVDMECWELHAQL---------PVTPHIMILPSDLRYFVKAL 110
Q+ +YP+ P EL ++ H+ V P +++ S L+YF K +
Sbjct: 499 QRSFYPVFPVPFELSSEVNLDVSHSDGLDICADNTPGVAPDVIVTSSKLKYFSKVV 554
>gi|336369696|gb|EGN98037.1| hypothetical protein SERLA73DRAFT_91246 [Serpula lacrymans var.
lacrymans S7.3]
Length = 591
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 19/113 (16%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEM----------TDRLSRLASHLLQQQ 65
P ++G+ V+SVDVL HL + E F E+ D +S L H+LQQ+
Sbjct: 437 NPCRFSLNGISFAVSSVDVLFHLRKNELFKRGAEVDPQSSSVLSANDPMSNLCRHILQQR 496
Query: 66 CYYPLIPPNVELPVDMECWELHAQL--------PVTPHIMILPSDLRYFVKAL 110
+YP+ P ++L ++ H++ PV P ++I+PS L++F K +
Sbjct: 497 SFYPIFPVPLDLTDEVNLDVSHSEGLKLVDGPDPVAPDVLIVPSRLKHFSKVV 549
>gi|268563773|ref|XP_002647009.1| C. briggsae CBR-DIV-1 protein [Caenorhabditis briggsae]
Length = 584
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 16 PRPWVLDI--SGVVVGVTSVDVLMHLGREEF--AAAPEMTDRLSRLASHLLQQQCYYPLI 71
P P ++ I +GV + VTS + + L EF + E +DR++RL SHLL QQ YPL
Sbjct: 440 PDPCIIRIGQNGVDMAVTSSEPIQGLSNSEFHRSINQENSDRIARLCSHLLTQQSLYPLE 499
Query: 72 PPNVELPVDMECWELHAQLPVTPHIMILPSDL 103
P E+P + QL TPHI+ P+ L
Sbjct: 500 P--TEIPSSLGDLLEVCQLTSTPHIVFAPTKL 529
>gi|391339837|ref|XP_003744253.1| PREDICTED: DNA polymerase alpha subunit B-like [Metaseiulus
occidentalis]
Length = 541
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P +LD++G+ +GV+S D++ + E E D A LLQQ+ +YPL PP+ EL
Sbjct: 407 PAILDVNGIQIGVSSTDIIRGM-TESLVNVEENLDVNRFCARALLQQRSFYPLFPPHAEL 465
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFV 107
+ + V PHI++LP+ + F
Sbjct: 466 ALRLPLLN-RMMFDVRPHILVLPATVAPFA 494
>gi|169858232|ref|XP_001835762.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|116503212|gb|EAU86107.1| alpha DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 612
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 21/117 (17%)
Query: 15 KPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM------------TDRLSRLASHLL 62
+P P I+ + G TSVDVL HL +EE+ +D +S L HLL
Sbjct: 441 QPNPCRFKINDISFGATSVDVLFHLRKEEYLKVGSQLQPIPAREGDLASDPMSNLCRHLL 500
Query: 63 QQQCYYPLIPPNVELPVDMECWELH---------AQLPVTPHIMILPSDLRYFVKAL 110
Q+ +YP+ P EL ++ H ++ P ++I+PS LR F K +
Sbjct: 501 DQRSFYPIFPVPEELSHEINLDVSHLDGARIIDDGEIDYAPDVLIVPSRLRKFDKVV 557
>gi|440466804|gb|ELQ36048.1| DNA polymerase subunit alpha B [Magnaporthe oryzae Y34]
gi|440480288|gb|ELQ60962.1| DNA polymerase subunit alpha B [Magnaporthe oryzae P131]
Length = 666
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHL--GREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-- 73
P I+ +VG++S DVL L G AP+ DRLSRLA ++++Q+ Y+PL PP
Sbjct: 502 PMTFSINETLVGISSQDVLYQLQGGVLAGGKAPDGMDRLSRLARNVIEQRHYFPLFPPMD 561
Query: 74 NVELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ +L + V P +++LPS + F +
Sbjct: 562 RSKLPKTGTAEELALGSVLDVSYLKLGEMVNVRPDVLVLPSAMPPFAR 609
>gi|341878849|gb|EGT34784.1| CBN-DIV-1 protein [Caenorhabditis brenneri]
Length = 579
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 16 PRPWVLDI--SGVVVGVTSVDVLMHLGREEF--AAAPEMTDRLSRLASHLLQQQCYYPLI 71
P P +L I G+ + VTS + + L EF + E TDR++RL+SH+L Q YPL
Sbjct: 435 PDPCILRIGQKGIEIAVTSSEPIQGLSNAEFHRSVNQENTDRIARLSSHMLTQHSLYPLE 494
Query: 72 PPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
P E+P M +L TPHI+ P+ L VK
Sbjct: 495 P--TEVPSSMGDILEVCRLTSTPHIVFAPTKLAPSVK 529
>gi|389641335|ref|XP_003718300.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
gi|351640853|gb|EHA48716.1| DNA polymerase subunit alpha B [Magnaporthe oryzae 70-15]
Length = 666
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHL--GREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-- 73
P I+ +VG++S DVL L G AP+ DRLSRLA ++++Q+ Y+PL PP
Sbjct: 502 PMTFSINETLVGISSQDVLYQLQGGVLAGGKAPDGMDRLSRLARNVIEQRHYFPLFPPMD 561
Query: 74 NVELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ +L + V P +++LPS + F +
Sbjct: 562 RSKLPKTGTAEELALGSVLDVSYLKLGEMVNVRPDVLVLPSAMPPFAR 609
>gi|342880849|gb|EGU81867.1| hypothetical protein FOXB_07662 [Fusarium oxysporum Fo5176]
Length = 655
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF---AAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P L I+ +V+GV+S D+L L EE TD +SRL +L++Q+ Y+PL PP
Sbjct: 491 PMTLSINELVLGVSSQDILSQLRSEEVVSRGGGQPGTDLMSRLCRYLVEQRHYFPLFPPT 550
Query: 75 --VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ EL + V P +MI+PS L F K
Sbjct: 551 DRSKLPKTGTEDGLATGAALDLSYLELGEMVNVRPDVMIVPSLLPPFAK 599
>gi|408397989|gb|EKJ77126.1| hypothetical protein FPSE_02770 [Fusarium pseudograminearum CS3096]
Length = 655
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF---AAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P L I+ VV+GV+S D+L L EE A D +SRL +L++Q+ Y+PL PP
Sbjct: 491 PMTLSINEVVLGVSSQDILSQLRSEEVVSRGGAQPSGDLMSRLCRYLVEQRHYFPLFPPT 550
Query: 75 --VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ EL + V P +M++PS L F K
Sbjct: 551 ERSKLPKTGTEDGVATGAVLDLSYLELGEMVNVRPDVMVVPSLLPPFAK 599
>gi|46125287|ref|XP_387197.1| hypothetical protein FG07021.1 [Gibberella zeae PH-1]
Length = 655
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF---AAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P L I+ VV+GV+S D+L L EE A D +SRL +L++Q+ Y+PL PP
Sbjct: 491 PMTLSINEVVLGVSSQDILSQLRSEEVVSRGGAQPGGDLMSRLCRYLVEQRHYFPLFPPT 550
Query: 75 --VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ EL + V P +M++PS L F K
Sbjct: 551 ERSKLPKTGTEDGVATGAVLDLSYLELGEMVNVRPDVMVVPSLLPPFAK 599
>gi|336269555|ref|XP_003349538.1| hypothetical protein SMAC_03126 [Sordaria macrospora k-hell]
gi|380093387|emb|CCC09045.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 666
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-AAAPEMTDRLSRLASHLLQQQCYYPLIPPN-- 74
P L ++ VVG++S D L L EE + E T+ LSR+A +L++Q+ Y+PL PP
Sbjct: 499 PMTLSLNETVVGISSQDALWELKHEELIGGSVEDTNGLSRVARYLIEQRHYFPLFPPTDR 558
Query: 75 VELP----------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D+ +L + V P ++I+PS L F K +
Sbjct: 559 TKLPKTGRQVIDGQAAPGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKVI 610
>gi|336382478|gb|EGO23628.1| hypothetical protein SERLADRAFT_356508 [Serpula lacrymans var.
lacrymans S7.9]
Length = 363
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-----------AAAPEMTDRLSRLASHLLQQQC 66
P ++G+ V+SVDVL HL + E ++ D +S L H+LQQ+
Sbjct: 210 PCRFSLNGISFAVSSVDVLFHLRKNELFKRGAEVDPQSSSVLSANDPMSNLCRHILQQRS 269
Query: 67 YYPLIPPNVELPVDMECWELHAQ--------LPVTPHIMILPSDLRYFVKAL 110
+YP+ P ++L ++ H++ PV P ++I+PS L++F K +
Sbjct: 270 FYPIFPVPLDLTDEVNLDVSHSEGLKLVDGPDPVAPDVLIVPSRLKHFSKVV 321
>gi|58261876|ref|XP_568348.1| alpha DNA polymerase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134118395|ref|XP_772211.1| hypothetical protein CNBM1300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254819|gb|EAL17564.1| hypothetical protein CNBM1300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230521|gb|AAW46831.1| alpha DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 737
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGR-------EEFAAAPEMT-----DRLSRLASHLLQ 63
P P ++ V + ++SVD+L HLG+ +E A P M+ D L+ +L
Sbjct: 567 PNPCTFSVNEVTISLSSVDILFHLGQAHAPIRAQEADADPGMSGSPAPDPLANHIRQVLG 626
Query: 64 QQCYYPLIPPNVELPVDMECWELHA---QLPVTPHIMILPSDLRYFVK 108
Q+ +YPL PP ++ ++ H ++ P I+ILPS L FVK
Sbjct: 627 QRSFYPLFPPQEDVAGEVNLDVTHYPLLKMDQAPDILILPSRLNKFVK 674
>gi|412987890|emb|CCO19286.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 19/100 (19%)
Query: 18 PWVLDISGVVVGVTSVDVLMHL------GREEFAAAPEMTDRLSRLASHLLQQQCYYPLI 71
P +++G+ V V++ D+L HL G+ + + + TDR++RL SH++ Q YPL
Sbjct: 494 PSAFEVNGIRVAVSTCDILKHLSGFERGGKGKTSTEQQQTDRMTRLCSHMVGQMSMYPLF 553
Query: 72 PPNVELPVDMECWELH-AQLPV-------TPHIMILPSDL 103
PP+ + +E H A +P+ P +++L SDL
Sbjct: 554 PPHPDAK-----FESHDATVPLRVGMDERVPDLIVLTSDL 588
>gi|170089217|ref|XP_001875831.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649091|gb|EDR13333.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 579
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 21/116 (18%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF-------AAAPEM-----TDRLSRLASHLLQ 63
P P I+ + V+SVDVL HL +E+ A P + +D ++ L HLLQ
Sbjct: 421 PNPARFSINDISFAVSSVDVLFHLRTQEYIKRGVEVEALPALEGDVPSDAMANLCRHLLQ 480
Query: 64 QQCYYPL--IPPNVELPVDMECWELHA-------QLPVTPHIMILPSDLRYFVKAL 110
Q+ +YPL +P + V+++ A L P I+ILPS L+ F K +
Sbjct: 481 QRSFYPLFPVPADSSHEVNLDVTHSDAISMIDDGDLDYAPDILILPSRLKQFTKTV 536
>gi|313224814|emb|CBY20606.1| unnamed protein product [Oikopleura dioica]
Length = 527
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 28 VGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVELPVDMECWELH 87
+ SVD+ + L + E P + + SR+ HLL QQC PL P E+ VD ++ +
Sbjct: 408 IAAISVDLPLSLMKTEIVKNPSNSCKFSRIGEHLLSQQCMMPLFPAPEEISVDYSKFKEN 467
Query: 88 AQLPVTPHIMILPSDLRYFVK 108
P+++++ S+L F+K
Sbjct: 468 ICFEKQPNVLVVRSELNPFIK 488
>gi|406866827|gb|EKD19866.1| DNA polymerase alpha/epsilon subunit B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 668
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPP--N 74
P ++ ++ V VG++S DVL L E A T LSRL+S+LL+Q+ ++P+ PP
Sbjct: 503 PIIISLNEVAVGISSQDVLTELRSSETAEGRARETPILSRLSSYLLEQRSFFPIFPPLDR 562
Query: 75 VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D +L + V P ++ILPS L+ F K
Sbjct: 563 ASLPKSGTASGIPTGAMLDTSYLKLGEMVRVRPDVLILPSALQPFSK 609
>gi|336473167|gb|EGO61327.1| hypothetical protein NEUTE1DRAFT_77266 [Neurospora tetrasperma FGSC
2508]
gi|350293573|gb|EGZ74658.1| DNA polymerase alpha, subunit B [Neurospora tetrasperma FGSC 2509]
Length = 667
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAP-EMTDRLSRLASHLLQQQCYYPLIPPN-- 74
P L ++ +VG++S D L L EE E T+ LSR+A +L++Q+ Y+PL PP
Sbjct: 500 PMTLSLNETLVGISSQDALWELKHEELIGGTVEDTNGLSRVARYLIEQRHYFPLFPPTDR 559
Query: 75 VELP----------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D+ +L + V P ++I+PS L F K +
Sbjct: 560 TKLPKTGRQVIDGQAALGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKVI 611
>gi|164426754|ref|XP_961324.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
gi|157071464|gb|EAA32088.2| hypothetical protein NCU03597 [Neurospora crassa OR74A]
Length = 645
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAP-EMTDRLSRLASHLLQQQCYYPLIPPN-- 74
P L ++ +VG++S D L L EE E T+ LSR+A +L++Q+ Y+PL PP
Sbjct: 505 PMTLSLNETLVGISSQDALWELKHEELIGGTVEDTNGLSRVARYLIEQRHYFPLFPPTDR 564
Query: 75 VELP----------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D+ +L + V P ++I+PS L F K L
Sbjct: 565 TKLPKTGRQVIDGQAAPGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKLL 616
>gi|18376383|emb|CAD21272.1| related to POL12 (DNA-directed DNA polymerase alpha) [Neurospora
crassa]
Length = 667
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAP-EMTDRLSRLASHLLQQQCYYPLIPPN-- 74
P L ++ +VG++S D L L EE E T+ LSR+A +L++Q+ Y+PL PP
Sbjct: 500 PMTLSLNETLVGISSQDALWELKHEELIGGTVEDTNGLSRVARYLIEQRHYFPLFPPTDR 559
Query: 75 VELP----------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D+ +L + V P ++I+PS L F K +
Sbjct: 560 TKLPKTGRQVIDGQAAPGAMLDISYLKLGEMVNVRPDVLIVPSALPPFAKVI 611
>gi|308497134|ref|XP_003110754.1| CRE-DIV-1 protein [Caenorhabditis remanei]
gi|308242634|gb|EFO86586.1| CRE-DIV-1 protein [Caenorhabditis remanei]
Length = 581
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 14 SKPRPWVLDISGVVVGVTSVDVLMHLGREEF--AAAPEMTDRLSRLASHLLQQQCYYPLI 71
S P + + G+ V VTS + + L EF +A E DR++RL SH+L QQ YPL
Sbjct: 437 SDPCIFRIGQKGIEVAVTSSEPIQGLSNSEFHRSANQENIDRIARLCSHMLTQQTLYPLE 496
Query: 72 PPNVELPVDMECWELHAQLPVTPHIMILPSDL 103
P E+P M +L +PHI+ P+ L
Sbjct: 497 P--TEVPSSMGDLLEVCRLTSSPHIVFAPTKL 526
>gi|405123604|gb|AFR98368.1| alpha DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 687
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGR-------EEFAAAPEMT-----DRLSRLASHLLQ 63
P P ++ V + ++SVD+L HLG+ +E A P M+ D L+ +L
Sbjct: 517 PNPCTFSVNEVTISLSSVDILFHLGQAHAPIRAQEADADPNMSGSPAPDPLANHIRQVLG 576
Query: 64 QQCYYPLIPPNVELPVDMECWELHA---QLPVTPHIMILPSDLRYFVK 108
Q+ +YP+ PP ++ ++ H ++ P I+ILPS L F K
Sbjct: 577 QRSFYPIFPPQEDVAGEVNLDVTHYPLLKMDQAPDILILPSRLNKFAK 624
>gi|388579274|gb|EIM19600.1| DNA polymerase alpha, subunit B [Wallemia sebi CBS 633.66]
Length = 560
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 27/120 (22%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-------------AAAPEMTDRLSRLASHLLQQ 64
P ++ V+ G+++VD MH+ +EEF + D + L S ++ Q
Sbjct: 386 PASFHVNEVLFGISNVDNFMHIRKEEFFKPLKEADEEENETNGATLNDNMKNLCSDIIDQ 445
Query: 65 QCYYPLIPPNVELPVDMECWELHAQLP--------------VTPHIMILPSDLRYFVKAL 110
Q YYP+ P EL D+ H +L V P I+ILPS L+ F K +
Sbjct: 446 QIYYPMFPAPKELSQDVNLDVSHLELANFPNGKTSEDADERVIPDILILPSILKNFAKVV 505
>gi|358392300|gb|EHK41704.1| hypothetical protein TRIATDRAFT_134831 [Trichoderma atroviride IMI
206040]
Length = 654
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 29/134 (21%)
Query: 4 LNKLLSEDSDSKPR--------------PWVLDISGVVVGVTSVDVLMHLGREEFAAAPE 49
LNK +S D+ PR P L I+ VV+G++S DVL L EE
Sbjct: 465 LNKHVSWPQDTIPRRELGLPKSVRIVSNPMTLSINEVVLGLSSQDVLYELRNEEVTKGAP 524
Query: 50 MTDRLSRLASHLLQQQCYYPLIPPN--VELP-------------VDMECWELHAQLPVTP 94
D + RL +L++Q+ ++P+ PP LP +D+ +L + V P
Sbjct: 525 AGDLMRRLCRYLVEQRHFFPVFPPTDRSRLPKTGTQHGLATGAMLDVSYLKLGEMVNVRP 584
Query: 95 HIMILPSDLRYFVK 108
+M++PS L F K
Sbjct: 585 DVMLMPSSLPPFAK 598
>gi|340517616|gb|EGR47860.1| hypothetical protein TRIREDRAFT_79187 [Trichoderma reesei QM6a]
Length = 664
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPN--V 75
P L ++ VVVG++S DVL L EE + D + RL+ HL++Q+ ++P+ PP
Sbjct: 503 PMTLSMNEVVVGLSSQDVLYELRSEEVSKGAPAGDLMRRLSRHLIEQRHFFPVFPPTDRS 562
Query: 76 ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ +L + V P +++ PS L F +
Sbjct: 563 RLPRTGTEEGLATGAMLDVSYLKLGEMVNVRPDVLLTPSSLPPFAR 608
>gi|393218941|gb|EJD04429.1| DNA polymerase alpha, subunit B [Fomitiporia mediterranea MF3/22]
Length = 548
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFA-------------AAPEMTDRLSRLASHLL 62
P P I+ V G TSVDVL HL +E+A D L+ HLL
Sbjct: 393 PNPCRFSINDVSFGSTSVDVLFHLRNQEYAQRGTPVDPVPPVSPESSGADPLTNACRHLL 452
Query: 63 QQQCYYPLIPPNVELPVDMECWELHA---QLPVT-----PHIMILPSDLRYFVK 108
Q+ +YP+ P +L D+ H+ +L + P ++ LPS L+ F K
Sbjct: 453 SQRSFYPIFPVPADLSSDVNLDVSHSGGLRLDTSNEQHAPDVIFLPSKLKQFAK 506
>gi|449549021|gb|EMD39987.1| hypothetical protein CERSUDRAFT_103890 [Ceriporiopsis subvermispora
B]
Length = 589
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPE--------------MTDRLSRLASHL 61
P P I+ V GV+SVDV+ HL +EEF + D + HL
Sbjct: 429 PNPARFAINDVSFGVSSVDVVFHLRKEEFLKRGQEVDPVPAEVIEGQAAADPMVNSCRHL 488
Query: 62 LQQQCYYPLIPPNVELP----VDMECWEL------HAQLPVTPHIMILPSDLRYFVKAL 110
LQQ+ +YP+ P ++L +D+ W A+ P ++I PS L++F K +
Sbjct: 489 LQQRSFYPIFPVPLDLSHEVNLDVAHWAGLRLGGDGAEEDTAPDVLITPSRLKHFSKVV 547
>gi|157116632|ref|XP_001658585.1| hypothetical protein AaeL_AAEL007692 [Aedes aegypti]
gi|108876368|gb|EAT40593.1| AAEL007692-PA [Aedes aegypti]
Length = 618
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++ I+G+ +G+T+ D++ L E + P+ D++ R +++ + +YPL PP
Sbjct: 478 PDPCIISINGLEIGITTADIIKDLSEAEVSGDPK-GDKIKRAFNYMFHHKTFYPLNPPPE 536
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP+DM+ +L P++MI P DL+ +++
Sbjct: 537 NLPLDMDLLSTFGKLSRVPNMMICPGDLKCYIR 569
>gi|322718571|gb|ADX07321.1| putative ectomycorrhiza-upregulated exo-beta-1,3-glucanase GH5
[Flammulina velutipes]
Length = 1690
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 35/130 (26%)
Query: 9 SEDSDSKPR------PWVLDISGVVVGVTSVDVLMHLGREEFA-----------AAPEMT 51
S+ ++S PR P I+ V G+T+ D++ HL +E PE
Sbjct: 370 SDVTNSDPRIRLVSNPASFSINNVTFGITTHDIVFHLKSQEVGIRGDEVDSVEPELPEDV 429
Query: 52 DRLSRLASHLLQQQCYYPLIPPNVELPVDMECWELHAQL-------------PVTPHIMI 98
D ++ HLLQQQ YYP+ P +P+D E ++ L P +++
Sbjct: 430 DGIANACRHLLQQQSYYPMFP----VPLD-ESERVNLDLTHSSGLAMSTVDGAYAPDVLV 484
Query: 99 LPSDLRYFVK 108
+P+ L+ FVK
Sbjct: 485 VPTRLKQFVK 494
>gi|358388584|gb|EHK26177.1| hypothetical protein TRIVIDRAFT_73573 [Trichoderma virens Gv29-8]
Length = 649
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPN--V 75
P L ++ VV+G++S DVL L EE + + + RL HL++Q+ Y+P+ PP
Sbjct: 488 PMTLSMNEVVLGLSSQDVLYELRSEEISKGAPPGELMRRLCRHLVEQRHYFPVFPPTDRS 547
Query: 76 ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ +L + V P +M++PS L F K
Sbjct: 548 RLPKTGTEDGLATGAMLDVSYLKLGEMVSVRPDVMLMPSFLPPFAK 593
>gi|149575496|ref|XP_001519697.1| PREDICTED: DNA polymerase alpha subunit B, partial [Ornithorhynchus
anatinus]
Length = 439
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQ 65
P L ++GVV G+TS D+L H+G EE ++ +DR SR+ H+L Q+
Sbjct: 339 PCTLSVNGVVFGLTSTDLLFHMGSEEICSSSSGSDRFSRILKHILTQR 386
>gi|367025023|ref|XP_003661796.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
gi|347009064|gb|AEO56551.1| hypothetical protein MYCTH_2090680 [Myceliophthora thermophila ATCC
42464]
Length = 658
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 19/110 (17%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP--NV 75
P L ++ +V+GV+S D L L EE D LSR++ +L++Q+ ++PL PP
Sbjct: 492 PMTLRMNEMVLGVSSQDALWELRSEELVGGARAADALSRVSRYLVEQRHFFPLFPPADRR 551
Query: 76 ELP-----------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ +L + V P ++++PS L F K
Sbjct: 552 RLPKTGAADAAGGGLPPGAMLDVSYLKLGEMIDVRPDVLVVPSALPPFAK 601
>gi|395330969|gb|EJF63351.1| DNA polymerase alpha, subunit B [Dichomitus squalens LYAD-421 SS1]
Length = 605
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 37/130 (28%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF------------AAAPEM---TDRLSRLASH 60
P P ++G+ +SVDVL HL +EEF A PE +D ++ L H
Sbjct: 430 PNPARFTVNGLHFAASSVDVLFHLRKEEFFKRAAEIEPLAGPADPEGQAPSDGMANLCRH 489
Query: 61 LLQQQCYYPLIP----------------------PNVELPVDMECWELHAQLPVTPHIMI 98
+LQQ+ +YP+ P P E D E ++ P ++I
Sbjct: 490 VLQQRSFYPIFPVPLDLAHEINLDVTHSDLLHLVPQDEDAEDAEGAVDPSRARCAPDVLI 549
Query: 99 LPSDLRYFVK 108
+PS L++F K
Sbjct: 550 VPSRLKHFSK 559
>gi|358057840|dbj|GAA96342.1| hypothetical protein E5Q_03008 [Mixia osmundae IAM 14324]
Length = 2172
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 28/120 (23%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF--AAAP--------------EMTDRLSRLAS 59
P P V ++ V G+TSVD L HL E AA P D LSR
Sbjct: 1984 PNPTVFSVNEVTFGITSVDSLFHLRSSEHVQAATPVRDEAQAMDAEPVANAKDALSRACR 2043
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPH-----------IMILPSDLRYFVK 108
H+L+Q+ +YPL P V E E+ L VT ++ILPS L+ F K
Sbjct: 2044 HILRQRTFYPLFPAPVLKGRPGEADEI-LNLDVTHQDLLQIGNDGVDVLILPSRLKAFAK 2102
>gi|380482927|emb|CCF40930.1| DNA polymerase alpha/epsilon subunit B [Colletotrichum
higginsianum]
Length = 659
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L ++ +V+G++S D+L L EE P LSRL+ H+L+Q+ ++PL PP
Sbjct: 497 PMTLSMNEMVMGISSQDILWQLRHEELVGGRPSDPSLLSRLSRHMLEQRHFFPLFPPTDR 556
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D+ +L + V P ++++PS L F K +
Sbjct: 557 PKLPKTGTEEGIPPGAMLDLSYLKLGEMVNVRPDVLVVPSFLPPFAKVV 605
>gi|171692981|ref|XP_001911415.1| hypothetical protein [Podospora anserina S mat+]
gi|170946439|emb|CAP73240.1| unnamed protein product [Podospora anserina S mat+]
Length = 593
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-AAAPEMTDRLSRLASHLLQQQCYYPLIPPN-- 74
P L ++ +V+G++S DVL L EE P+ L R +L++Q+ Y+PL PP
Sbjct: 484 PMTLSMNEIVLGISSQDVLFELRHEELIGGRPQEPRLLERACRYLVEQRHYFPLFPPTDR 543
Query: 75 VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D+ +L + V P ++++PS L F K +
Sbjct: 544 KKLPKTGRGDGVGPGAVLDVGYLKLGEMVNVRPDVLVVPSSLLAFCKGI 592
>gi|346325339|gb|EGX94936.1| DNA polymerase alpha/primase associated subunit [Cordyceps
militaris CM01]
Length = 667
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFA-AAPEMTDRLSRLASHLLQQQCYYPLIPPN-- 74
P L ++ VV+ V+S D L L EE A AAP D +RL HL++Q+ YYP+ PP
Sbjct: 510 PMTLSVNEVVLAVSSQDALWALYAEELARAAP--GDLTARLCRHLVEQRHYYPVYPPTDR 567
Query: 75 VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ +L + V P +M+ PS L F K
Sbjct: 568 ARLPRTGTDDGLATGAVLDLSYLKLGEMVNVRPDVMLTPSALPPFAK 614
>gi|378726669|gb|EHY53128.1| DNA polymerase alpha subunit B [Exophiala dermatitidis NIH/UT8656]
Length = 662
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-- 73
P P + ++ VV+G++S D+L L RE+ + +D L+RL S L+ Q+ ++PL PP
Sbjct: 501 PNPCYVSLNEVVIGISSQDILYELSREQLSHG-AGSDLLTRLPSFLIDQRHFFPLFPPMS 559
Query: 74 ------NVELPVDMECWE-----LHAQLPVTPHIMILPSDLRYFVK 108
N + C + L + V P +++LPS L +K
Sbjct: 560 RDKLSSNGVVKATGACLDVGYLKLGEWMAVKPDVLVLPSILTPSIK 605
>gi|346975446|gb|EGY18898.1| DNA polymerase subunit alpha B [Verticillium dahliae VdLs.17]
Length = 658
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-AAAPEMTDRLSRLASHLLQQQCYYPLIPP--N 74
P L ++ V+G++S D L L EE A P+ T LSRL +LL+Q+ Y+PL PP
Sbjct: 497 PMTLSVNETVMGLSSQDALWELRHEEVVAGKPKDTVLLSRLCRYLLEQRHYFPLFPPADR 556
Query: 75 VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ +L + V P ++++PS L F K
Sbjct: 557 SKLPKTGTEEGLPPGAMLDVSYLKLGEMVNVRPDLLLVPSFLPPFAK 603
>gi|156059150|ref|XP_001595498.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980]
gi|154701374|gb|EDO01113.1| hypothetical protein SS1G_03587 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 664
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEF-AAAPEMTDRLSRLASHLLQQQCYYPLIPP-- 73
P + ++ +V+G++S D+L L EE P+ + L+RL +L++Q+ ++PL PP
Sbjct: 499 NPMTIALNEIVMGISSQDILYELRHEEIVGGKPQDSTLLARLPKYLIEQRHFFPLFPPVQ 558
Query: 74 NVELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D +L + V P ++++PS L F K +
Sbjct: 559 RSQLPKTGTEDGIPVGAMLDTSFLKLGEMINVRPDMLVVPSSLPPFAKVV 608
>gi|321265257|ref|XP_003197345.1| alpha DNA polymerase [Cryptococcus gattii WM276]
gi|317463824|gb|ADV25558.1| Alpha DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 718
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 17/109 (15%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGR-------EEFAAAPEMT-----DRLSRLASHLLQ 63
P P ++ V + ++SVD+L HLG+ +E P+M D L+ +L
Sbjct: 548 PNPCTFSVNEVTISLSSVDILFHLGQAHAPIRAQEADPDPDMNGIPAPDPLANHIRQVLG 607
Query: 64 QQCYYPLIPP----NVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
Q+ +YP+ PP E+ +D+ + L ++ P I+ILPS L F K
Sbjct: 608 QRSFYPIFPPPEDVAGEVNLDVTHYPL-LKMDQAPDILILPSRLNKFAK 655
>gi|303314407|ref|XP_003067212.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106880|gb|EER25067.1| DNA polymerase alpha subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320037495|gb|EFW19432.1| DNA polymerase alpha/primase associated subunit [Coccidioides
posadasii str. Silveira]
Length = 657
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P P + ++ V G+ S DVL L REE P + L+RL+ +L++Q+ + P+ PP+
Sbjct: 492 PNPVTISLNESVFGLCSYDVLYELRREEVLGGKPTEGNLLTRLSRYLIEQRHFSPVFPPS 551
Query: 75 VE--LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I+PS L FVK +
Sbjct: 552 AREHLPKSGTENGIATGAMLDLRYLKLGEWWNVQPDVLIIPSVLPPFVKVI 602
>gi|119174579|ref|XP_001239649.1| hypothetical protein CIMG_09270 [Coccidioides immitis RS]
gi|392869843|gb|EAS28372.2| DNA polymerase alpha/primase associated subunit [Coccidioides
immitis RS]
Length = 657
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P P + ++ V G+ S DVL L REE P + L+RL+ +L++Q+ + P+ PP+
Sbjct: 492 PNPVTISLNESVFGLCSYDVLYELRREEVLGGKPTEGNLLTRLSRYLIEQRHFSPVFPPS 551
Query: 75 VE--LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I+PS L FVK +
Sbjct: 552 AREHLPKSGTENGIATGAMLDLRYLKLGEWWNVQPDVLIIPSVLPPFVKVI 602
>gi|302911324|ref|XP_003050467.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731404|gb|EEU44754.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 656
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 18/109 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFA--AAPE-MTDRLSRLASHLLQQQCYYPLIPPN 74
P L I+ +V+GV+S D+L L EE P+ D + RL +L++Q+ Y+PL PP
Sbjct: 492 PMTLSINELVLGVSSQDILSQLRSEEVVSRGGPQPGGDLMGRLCRYLVEQRHYFPLFPPT 551
Query: 75 --VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ EL + V P +M++PS L F K
Sbjct: 552 DRSRLPKTGTEEGIATGAVLDVSYLELGEMVNVRPDVMMVPSLLPPFAK 600
>gi|255954187|ref|XP_002567846.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589557|emb|CAP95703.1| Pc21g08060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 657
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L + V+G++S DVL L REE P + L+RL +L++Q+ ++PL PP
Sbjct: 494 PVTLSFNECVIGMSSHDVLSELRREEVLHGRPAEGNLLTRLPKYLVEQRHFFPLFPPTAR 553
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP VD+ +L V P I+I+PS L FVK
Sbjct: 554 SNLPRPGTEGGMATGAMVDLPYMKLGEWWNVRPDILIVPSMLPPFVK 600
>gi|307110154|gb|EFN58390.1| hypothetical protein CHLNCDRAFT_10114, partial [Chlorella
variabilis]
Length = 311
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L + VVGV + D LM REE + +RL+ LA+HL Q Y+P+ PP +
Sbjct: 214 NPVTLRCNEAVVGVGAADWLMACIREEMPLSVAANERLTALAAHLPAQSSYFPIFPPPLG 273
Query: 77 LPVDMECWELHAQL 90
P+D C + A L
Sbjct: 274 TPLD--CSKAGAAL 285
>gi|452845614|gb|EME47547.1| hypothetical protein DOTSEDRAFT_59988 [Dothistroma septosporum
NZE10]
Length = 667
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 29/120 (24%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT----DRLSRLASHLLQQQCYYPLIPP 73
P L I+ ++VG++S DVL L RE A D L RL++H+L+Q ++P+ PP
Sbjct: 490 PMALSINEMLVGMSSQDVLSELRRENVYQAGNGQRSNDDLLGRLSNHILEQSHFFPVFPP 549
Query: 74 NV------------ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+P +D+ ++L V P ++ILPS L F K
Sbjct: 550 AAREDLPRPTAIPYEIPPPGGEERVAMGANIDLTYYKLGEFWQVRPDLLILPSVLNPFAK 609
>gi|193631895|ref|XP_001945319.1| PREDICTED: hypothetical protein LOC100168132 [Acyrthosiphon pisum]
Length = 562
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 2 SSLNKLLSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHL 61
SSL L + P V ++ +++ + D LM L E + ++LA +
Sbjct: 404 SSLPNLYPNNIYMVSDPSVFSVNDIIIAGNASDSLMGLHVSAINQTRE--EMFTKLAKQI 461
Query: 62 LQQQCYYPLIPPNVELPVDMECWELHAQLPV-TPHIMILPSDLRYFVKAL 110
+ Q+C +P N +PVD W H L TPHI++ S LR F++ +
Sbjct: 462 IWQRCLHPSYVANPNVPVDHLLWLEHCTLQQNTPHIILTSSQLRTFIRVV 511
>gi|347828114|emb|CCD43811.1| similar to DNA polymerase alpha/primase associated subunit
[Botryotinia fuckeliana]
Length = 670
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-AAAPEMTDRLSRLASHLLQQQCYYPLIPP--N 74
P + ++ +V+G++S D+L L EE P+ L+RL +L++Q+ ++PL PP
Sbjct: 506 PMTIALNEIVMGISSQDILYELRHEEIIGGKPQDPTLLARLPKYLIEQRHFFPLFPPVQR 565
Query: 75 VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D +L + V P ++++PS L F K
Sbjct: 566 TQLPKTGTEDGIPVGAMLDTSFLKLGEMINVRPDMLVVPSSLPPFAK 612
>gi|154304222|ref|XP_001552516.1| hypothetical protein BC1G_08381 [Botryotinia fuckeliana B05.10]
Length = 726
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-AAAPEMTDRLSRLASHLLQQQCYYPLIPP--N 74
P + ++ +V+G++S D+L L EE P+ L+RL +L++Q+ ++PL PP
Sbjct: 506 PMTIALNEIVMGISSQDILYELRHEEIIGGKPQDPTLLARLPKYLIEQRHFFPLFPPVQR 565
Query: 75 VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+LP +D +L + V P ++++PS L F K +
Sbjct: 566 TQLPKTGTEDGIPVGAMLDTSFLKLGEMINVRPDMLVVPSSLPPFAKVV 614
>gi|322703760|gb|EFY95364.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
anisopliae ARSEF 23]
Length = 595
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 17/107 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP--NV 75
P L ++ +VVG+++ D+L L EE A D ++RL +L++Q+ Y+PL P
Sbjct: 491 PMTLSMNEMVVGISTQDILYELRSEELAKTS--GDLMARLVRYLVEQRHYFPLFPAAERT 548
Query: 76 ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKA 109
LP +D+ +L + V P +M++PS L F K
Sbjct: 549 RLPKTGTEEGLATGAVLDVGYLKLGEMVNVRPDVMLVPSSLPPFAKG 595
>gi|406603654|emb|CCH44807.1| hypothetical protein BN7_4376 [Wickerhamomyces ciferrii]
Length = 636
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 24/116 (20%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIP--- 72
P P + I+ +++GV++ D+ L ++ +P +R R+++H++QQ+ +YP P
Sbjct: 465 PNPSIFQINEILIGVSNNDIFKDL-KDINKGSPAGENRFDRISNHIIQQRRFYPSFPGSK 523
Query: 73 ------------------PNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
P+ EL D+ L V P I+I+PS+LR+F + +
Sbjct: 524 SQRKITSSNDDEDEFEFLPSSEL--DVPYLGLSEFNDVLPDILIIPSELRFFARVV 577
>gi|402081810|gb|EJT76955.1| DNA polymerase subunit alpha B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 674
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 20/111 (18%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT-----DRLSRLASHLLQQQCYYPLIP 72
P L I+ +VGV+S DVL LG A + D+ S L+ H+++Q+ Y+P+ P
Sbjct: 507 PMTLSINEALVGVSSQDVLYELGNAALAGGRQPGGGGQQDKFSLLSRHVIEQRHYFPVFP 566
Query: 73 P--NVELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
P LP +D+ +L + V P +++LPS L F +
Sbjct: 567 PLDRKRLPRTGTAEGLATGAVLDVSYLKLGDMVNVRPDVLVLPSALPPFAR 617
>gi|340905257|gb|EGS17625.1| DNA polymerase alpha-primase complex-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 718
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 22/113 (19%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT-DRLSRLASHLLQQQCYYPLIPPN-- 74
P ++++ +V+GV+S D+L L EE +A T D LSR +L++Q+ ++PL PP
Sbjct: 550 PSTVNVNEMVLGVSSQDILWELRHEELVSAGVGTGDSLSRACRYLIEQRHFFPLFPPTDR 609
Query: 75 VELP-------------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ +L L V P ++++PS L F K
Sbjct: 610 RKLPKTGGGIPGTEGAGIPPGAMLDISYLKLGEFLHVRPDVLVVPSALSPFAK 662
>gi|387592666|gb|EIJ87690.1| hypothetical protein NEQG_02237 [Nematocida parisii ERTm3]
gi|387595295|gb|EIJ92920.1| hypothetical protein NEPG_02319 [Nematocida parisii ERTm1]
Length = 385
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P ++ ++GV++G+T+VDVLM + R+E + E DR+ + H + Q + P +P ++
Sbjct: 268 PCMISLNGVLIGLTTVDVLMGISRKEISRNRE--DRMYDILVHSVYQGTFLPFVPQDI-- 323
Query: 78 PVDMECWELHAQLPVTPHIMILPSDL 103
PVD + P P + I P+ L
Sbjct: 324 PVDYSGFNAFL-WPYRPDLYIFPTCL 348
>gi|440635697|gb|ELR05616.1| hypothetical protein GMDG_01806 [Geomyces destructans 20631-21]
Length = 669
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPP--- 73
P + I+ +V G++S D+L L EE P+ L+RL ++++Q+ ++PL PP
Sbjct: 505 PMTVSINEIVTGISSQDILSELRHEEVTGGVPQAGGILARLPKYIIEQRHFFPLYPPVDR 564
Query: 74 -------NVELP-----VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
VE +D+ +L L V P ++I+PS L F K +
Sbjct: 565 KLLLRTGTVEGSPPGAMLDVSYVKLGEMLNVRPDLLIVPSALPPFAKVV 613
>gi|241123071|ref|XP_002403775.1| DNA polymerase alpha 70 kD subunit, putative [Ixodes scapularis]
gi|215493525|gb|EEC03166.1| DNA polymerase alpha 70 kD subunit, putative [Ixodes scapularis]
Length = 273
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFA 45
P P VLDI+GVVVG T VD+L+H+G+EE +
Sbjct: 181 PDPCVLDINGVVVGATGVDILLHMGKEELS 210
>gi|50287459|ref|XP_446159.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525466|emb|CAG59083.1| unnamed protein product [Candida glabrata]
Length = 661
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++ V VG ++VD+ + + M +R R++ H+LQQ+ YYP+ P +
Sbjct: 486 PNPSTFQLNEVFVGCSNVDIYKDMKEITKGGSTSMRNRFDRVSEHVLQQRRYYPVFPGGL 545
Query: 76 ELPV---DMECWELHAQ----------LPVT-------PHIMILPSDLRYFVKAL 110
+ + D ++ LP+T P I+++PS+L++F + +
Sbjct: 546 KKSLKFKDKTGKNIYEHISGADLDVPYLPLTEFVGGFAPDIIVIPSELQHFARVV 600
>gi|320581839|gb|EFW96058.1| B subunit of DNA polymerase alpha-primase complex [Ogataea
parapolymorpha DL-1]
Length = 603
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++ +VG ++ D+ L ++ AP R R++ H+++Q+ YYP+ P +
Sbjct: 439 PNPATFQLNEFLVGCSNNDIFKDL-KDVAVGAPLKESRFDRISGHVIEQRRYYPVFPGGL 497
Query: 76 ---------ELPVDMECWELH------AQLPVT-PHIMILPSDLRYFVK 108
E V + +LH A+ + P I+++PS+L+ F K
Sbjct: 498 KQKRSLKEDEQSVHISGADLHVSYMGLAEFNTSLPDILVIPSELKAFSK 546
>gi|302408437|ref|XP_003002053.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
gi|261358974|gb|EEY21402.1| DNA polymerase subunit alpha B [Verticillium albo-atrum VaMs.102]
Length = 593
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFA-AAPEMTDRLSRLASHLLQQQCYYPLIPP--N 74
P L ++ V+G++S D L L EE P+ T LSRL +LL+Q+ Y+PL PP
Sbjct: 432 PMTLSVNETVMGLSSQDALWELRHEEVVVGKPKDTVLLSRLCRYLLEQRHYFPLFPPADR 491
Query: 75 VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+LP +D+ +L + V P ++++PS L F K
Sbjct: 492 SKLPKTGTEEGLPPGAMLDVSYLKLGEMVNVRPDLLLVPSFLPPFAK 538
>gi|425772210|gb|EKV10621.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum Pd1]
gi|425777487|gb|EKV15659.1| DNA polymerase alpha/primase associated subunit [Penicillium
digitatum PHI26]
Length = 657
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L + V G+ S DVL L REE P + L+RL +L++Q+ ++PL+PP
Sbjct: 494 PVTLSFNECVFGMCSHDVLSELRREEVLHGRPAEGNLLTRLPKYLVEQRHFFPLLPPTAR 553
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP VD+ +L V P I+I+PS L FVK
Sbjct: 554 SNLPKPGFEGGMATGAMVDLPYMKLGEWWNVRPDILIVPSMLPPFVK 600
>gi|115387293|ref|XP_001211152.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195236|gb|EAU36936.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 660
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P+ + L+RL +L++Q+ +YP+ PP
Sbjct: 497 PVTLSLNETVIGMCSHDVLYELRREEAIHGRPKEGNLLTRLPKYLIEQRHFYPIYPPTAR 556
Query: 77 --LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D +L V P ++++PS L FVK +
Sbjct: 557 EALPKPGTEDGVATGAMLDTSYLKLGEWCNVRPDVLLVPSMLPPFVKVV 605
>gi|322696184|gb|EFY87980.1| putative POL12 (DNA-directed DNA polymerase alpha) [Metarhizium
acridum CQMa 102]
Length = 616
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 17/107 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP--NV 75
P L ++ +V+GV+S D+L L EE A D ++RL +L++Q+ Y+PL P
Sbjct: 508 PMTLSMNEMVMGVSSQDILYELRSEELAKTS--GDLMTRLVRYLVEQRHYFPLFPAAERT 565
Query: 76 ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKA 109
LP +D+ +L + V P +M++PS L F K+
Sbjct: 566 RLPKTGTEEGLATGAVLDIGYLKLGEMVNVRPDVMLVPSCLPPFAKS 612
>gi|290982320|ref|XP_002673878.1| DNA polymerase alpha subunit B [Naegleria gruberi]
gi|284087465|gb|EFC41134.1| DNA polymerase alpha subunit B [Naegleria gruberi]
Length = 544
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 9 SEDSDSKPRPWVLDISG-----VVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQ 63
S S P P IS + +GVTS+D + + +E+ + D+ +L+
Sbjct: 389 SSKIQSFPNPSTFSISSPSFNPIKIGVTSIDAIKTIKEKEYTFG-YVEDQTEHYLKAVLE 447
Query: 64 QQCYYPLIPPNVELPVD---MECWELHAQLPVTPHIMILPSD 102
QQ YYP + P+ E+P+D + + ++ +P+I+ILPSD
Sbjct: 448 QQYYYPRLLPSSEIPLDHSLLNGTKSSLKIEESPNIIILPSD 489
>gi|116198853|ref|XP_001225238.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
gi|88178861|gb|EAQ86329.1| hypothetical protein CHGG_07582 [Chaetomium globosum CBS 148.51]
Length = 657
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 20/111 (18%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF-AAAPEMTDRLSRLASHLLQQQCYYPLIPP--N 74
P L ++ +V+GV+S DVL L EE A D LSRL+ +L++Q+ ++PL P
Sbjct: 491 PMTLSMNEMVLGVSSQDVLWQLRHEELVGGAGSAGDALSRLSRYLVEQRHFFPLFPAVDR 550
Query: 75 VELP-----------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ +L + V P ++++PS + F K
Sbjct: 551 KRLPKTGAVDGAGGGVPPGAMLDVSYLKLGEMVEVRPDVLVVPSAMPPFAK 601
>gi|296420101|ref|XP_002839619.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635802|emb|CAZ83810.1| unnamed protein product [Tuber melanosporum]
Length = 652
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIP--- 72
P P I+ +V V++ D+L H+ +E + P+ T+ +R + L+ Q+ YPL P
Sbjct: 494 PNPATFSINEIVFSVSTNDILFHMTSQEISRNPQDTNPTARFSKALIYQRNLYPLFPGPS 553
Query: 73 ----------PNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
PN+++P ++ +L + + P +++LPS L K +
Sbjct: 554 KEQLPRGATGPNLDVP-NLRLADL---VSLAPDVLVLPSMLASSAKVV 597
>gi|254568602|ref|XP_002491411.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|238031208|emb|CAY69131.1| B subunit of DNA polymerase alpha-primase complex [Komagataella
pastoris GS115]
gi|328352078|emb|CCA38477.1| DNA polymerase subunit alpha B [Komagataella pastoris CBS 7435]
Length = 640
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P ++ ++GV+++D + ++ +R R+A H+LQQ+ YYP P ++
Sbjct: 471 PNPCSFQLNECLIGVSNLDSFKDIKDVNRGKIGDL-NRFDRIADHILQQRRYYPCFPGSL 529
Query: 76 EL--------------PVDMECWELHAQLPVTPHIMILPSDLRYF 106
+ +DM L V P ++I+PS++RYF
Sbjct: 530 KTRKGPDGTVEHICGADLDMPYMGLSELYDVLPDVLIIPSEMRYF 574
>gi|71014367|ref|XP_758704.1| hypothetical protein UM02557.1 [Ustilago maydis 521]
gi|46098494|gb|EAK83727.1| hypothetical protein UM02557.1 [Ustilago maydis 521]
Length = 764
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF--------------------AAAPEMTDRLS 55
P P VL ++ +V+GVTSVDVL + EE + A + + +
Sbjct: 594 PNPSVLFVNELVLGVTSVDVLADIKSEEMVTRIQASPNATASAASAVTQSVASKNKETNT 653
Query: 56 RLASHLLQQQCYYPLIPPNVELPVDMECWELH-AQLP-VTPHIMILPS 101
R + LL Q+ +YPL PP + + + H P VTP ++ILPS
Sbjct: 654 RWSRSLLSQRSFYPLFPPPTQSGLSYDTCHSHLLGFPAVTPDLLILPS 701
>gi|320591675|gb|EFX04114.1| DNA polymerase alpha primase associated subunit [Grosmannia
clavigera kw1407]
Length = 690
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAP-EMTDRLSRLASHLLQQQCYYPLIPP--N 74
P L I+ +V+GV+S DVL L EE + + +SR +LL+Q+ Y+PL PP
Sbjct: 522 PMTLSINEMVLGVSSQDVLYELRHEELSGGRLADANAMSRACRYLLEQRHYFPLFPPVDR 581
Query: 75 VELP---------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D +L + V P ++++PS L F +
Sbjct: 582 RSLPRTGVADTDFVATGAMLDTSYLKLGEMVNVRPDVLVVPSALPPFAR 630
>gi|238499981|ref|XP_002381225.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
gi|220692978|gb|EED49324.1| DNA polymerase alpha/primase associated subunit [Aspergillus flavus
NRRL3357]
Length = 651
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P+ + L+RL+ +L++Q+ + P+ PP+
Sbjct: 488 PVTLSLNETVIGLCSHDVLYELRREEALHGKPKEGNLLTRLSKYLVEQRHFNPVFPPSSR 547
Query: 77 --LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I+PS L FVK +
Sbjct: 548 DALPKPGIENGLATGATLDVSYMKLGEWWNVRPDVLIVPSMLPPFVKVV 596
>gi|391870358|gb|EIT79543.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Aspergillus oryzae 3.042]
Length = 651
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P+ + L+RL+ +L++Q+ + P+ PP+
Sbjct: 488 PVTLSLNETVIGLCSHDVLYELRREEALHGKPKEGNLLTRLSKYLVEQRHFNPVFPPSSR 547
Query: 77 --LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I+PS L FVK +
Sbjct: 548 DALPKPGIENGLATGATLDVSYMKLGEWWNVRPDVLIVPSMLPPFVKVV 596
>gi|169779341|ref|XP_001824135.1| DNA polymerase alpha/primase associated subunit [Aspergillus oryzae
RIB40]
gi|83772874|dbj|BAE63002.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 651
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P+ + L+RL+ +L++Q+ + P+ PP+
Sbjct: 488 PVTLSLNETVIGLCSHDVLYELRREEALHGKPKEGNLLTRLSKYLVEQRHFNPVFPPSSR 547
Query: 77 --LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I+PS L FVK +
Sbjct: 548 DALPKPGIENGLATGATLDVSYMKLGEWWNVRPDVLIVPSMLPPFVKVV 596
>gi|407923832|gb|EKG16895.1| DNA polymerase alpha/epsilon subunit B [Macrophomina phaseolina
MS6]
Length = 681
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 32/125 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPN-- 74
P + I+ ++VG+ S+DVL L REE + MT+ ++R ++++ Q+ + P+ PP
Sbjct: 501 PVTISINEIIVGINSLDVLDMLRREECVSDKARMTNAMARWGANIISQRSFCPVFPPTAR 560
Query: 75 -----------------------------VELPVDMECWELHAQLPVTPHIMILPSDLRY 105
+ P+D +L L V P ++I PS L
Sbjct: 561 EAYPKIEADRDIAVAAEGGEGAEKLDLLPIGAPLDTSFLKLTEWLNVRPDLLITPSALTP 620
Query: 106 FVKAL 110
F K +
Sbjct: 621 FAKVI 625
>gi|89632612|gb|ABD77538.1| DNA-directed polymerase alpha [Ictalurus punctatus]
Length = 123
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 70 LIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
L PP E+ +D E ++ + QLP+TP I+++PS+LRYF+K
Sbjct: 43 LHPPAEEVNMDYERFQQYGQLPLTPDILLVPSELRYFIK 81
>gi|296809716|ref|XP_002845196.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
gi|238842584|gb|EEQ32246.1| DNA polymerase subunit alpha B [Arthroderma otae CBS 113480]
Length = 664
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P + ++ V+VG+ + D L L REE P +D LSRL +L++Q+ + P+ PP
Sbjct: 501 PVAISLNEVMVGLCASDTLYELRREEVVGGRPSESDLLSRLPRYLIEQRHFSPVFPPTAR 560
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D L P I+I PS L F+K +
Sbjct: 561 ENLPKSGVDESLQIGSMLDTRYLRLGDWWKARPDILITPSVLPGFIKVV 609
>gi|67541370|ref|XP_664459.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
gi|40739064|gb|EAA58254.1| hypothetical protein AN6855.2 [Aspergillus nidulans FGSC A4]
Length = 905
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P ++ V+G+ S DVL L REE P+ + L+RL +L++Q+ + P+ PP+
Sbjct: 742 PVTFSLNETVIGMCSHDVLYELRREEALHGKPKEGNLLTRLVKYLIEQRHFLPIFPPSSR 801
Query: 77 --LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P I+I+PS L FVK +
Sbjct: 802 DALPRPGFEGGLATGAALDVSYSKLGEWWNVRPDILIVPSMLPPFVKVV 850
>gi|345560327|gb|EGX43452.1| hypothetical protein AOL_s00215g188 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPE--MTDRLSRLASHLLQQQCYYPLIPP-- 73
P ++ ++ + G++S D+L HL +E A+ + + RLA++++ +YPL P
Sbjct: 479 PCMIALNEIQFGISSADILFHLNMQEVKASGKGIEMNTFHRLANYVISSSHFYPLFPAPE 538
Query: 74 ----NVELPVDMECWELHAQLP--VTPHIMILPSDLRYFVKAL 110
PVD++ W A+ P + P ++IL S L VK +
Sbjct: 539 ASQVGYTTPVDLQ-WMRLAEFPGNIKPDVLILSSKLPGTVKVV 580
>gi|326472630|gb|EGD96639.1| DNA polymerase alpha/primase associated subunit [Trichophyton
tonsurans CBS 112818]
gi|326483559|gb|EGE07569.1| DNA polymerase subunit alpha B [Trichophyton equinum CBS 127.97]
Length = 664
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P + ++ ++VG+ + D L L REE P +D LSRL +L++Q+ + P+ PP
Sbjct: 501 PVAISLNEIMVGLCASDSLYELRREEVVGGRPSESDLLSRLPRYLIEQRHFSPVFPPTAR 560
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D +L P I+I PS L FVK +
Sbjct: 561 ENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILITPSVLPGFVKVV 609
>gi|327292604|ref|XP_003231000.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
gi|326466806|gb|EGD92259.1| DNA polymerase alpha/primase associated subunit [Trichophyton
rubrum CBS 118892]
Length = 664
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P + ++ ++VG+ + D L L REE P +D LSRL +L++Q+ + P+ PP
Sbjct: 501 PVAISLNEIMVGLCASDSLYELRREEVVGGRPSESDLLSRLPRYLIEQRHFSPVFPPTAR 560
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D +L P I+I PS L FVK +
Sbjct: 561 ENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILITPSVLPGFVKVV 609
>gi|238878822|gb|EEQ42460.1| hypothetical protein CAWG_00671 [Candida albicans WO-1]
Length = 664
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 31/124 (25%)
Query: 16 PRPWVLDISGVVVGVTSVDV---LMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIP 72
P P I+ V++G +++D+ L + +E+ A +R R+ H+ +Q+ YYP+ P
Sbjct: 477 PNPSGFSINEVLIGNSNLDIFKDLRDIYKEDTAIIS--NNRFERIVKHIFEQRRYYPIFP 534
Query: 73 PNVELPVDMECWEL-----------------HAQLPV---------TPHIMILPSDLRYF 106
+++ +C EL + P P ++ILPS+L+YF
Sbjct: 535 GSIKTEPKQKCTELLNGAQGEYLDGIAVGGSSLETPYLGLSELGDSLPDVLILPSELKYF 594
Query: 107 VKAL 110
K +
Sbjct: 595 AKVI 598
>gi|259480453|tpe|CBF71599.1| TPA: DNA polymerase alpha/primase associated subunit
(AFU_orthologue; AFUA_5G13020) [Aspergillus nidulans
FGSC A4]
Length = 682
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P ++ V+G+ S DVL L REE P+ + L+RL +L++Q+ + P+ PP+
Sbjct: 519 PVTFSLNETVIGMCSHDVLYELRREEALHGKPKEGNLLTRLVKYLIEQRHFLPIFPPSSR 578
Query: 77 --LP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ +L V P I+I+PS L FVK
Sbjct: 579 DALPRPGFEGGLATGAALDVSYSKLGEWWNVRPDILIVPSMLPPFVK 625
>gi|258567182|ref|XP_002584335.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905781|gb|EEP80182.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 583
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P P + ++ + G+ S DVL L EE P T+ L+RL +L++Q+ + P+ PP+
Sbjct: 458 PNPVTISLNESIFGLCSHDVLYELRTEEILGGKPTETNLLTRLPRYLIEQRHFSPVFPPS 517
Query: 75 V--ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ +L V P ++I PS L FV+
Sbjct: 518 ARERLPRAGTEDGVATGAMLDLRYLKLGEWWNVRPDVLITPSTLPPFVR 566
>gi|302662659|ref|XP_003022981.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
gi|291186956|gb|EFE42363.1| hypothetical protein TRV_02887 [Trichophyton verrucosum HKI 0517]
Length = 469
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P + ++ ++VG+ + D L L REE P +D LSRL +L++Q+ + P+ PP
Sbjct: 306 PVAISLNEIMVGLCASDSLYELRREEVVGGRPSESDLLSRLPRYLIEQRHFSPVFPPTAR 365
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D +L P I+I PS L FVK +
Sbjct: 366 ENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILITPSVLPGFVKVV 414
>gi|241949265|ref|XP_002417355.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
gi|223640693|emb|CAX45004.1| DNA polymerase alpha, subunit B, putative [Candida dubliniensis
CD36]
Length = 660
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 29/123 (23%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM--TDRLSRLASHLLQQQCYYPLIPP 73
P P ++ V++G +++D+ L R+ F + +R R+ H+L+Q+ YYP P
Sbjct: 473 PNPSGFSVNEVLIGNSNLDIFKDL-RDVFKEDTAIISNNRFERIVKHILEQRRYYPTFPG 531
Query: 74 NVELPVDMECWEL-----------------HAQLPV---------TPHIMILPSDLRYFV 107
+++ C +L + P P I+ILPS+L+YF
Sbjct: 532 SIKTEPKQNCIDLLNGAQGEYLDDIAVGGSSLETPYLGLAELGDSLPDILILPSELKYFA 591
Query: 108 KAL 110
K +
Sbjct: 592 KVI 594
>gi|159126923|gb|EDP52039.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus A1163]
Length = 617
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L + V+G+ S DVL L REE P+ L+RL +L++Q+ + P+ PP+
Sbjct: 436 PVTLSFNETVIGMCSYDVLYDLRREEVLHGKPKEGSLLTRLPKYLIEQRHFLPMFPPSSR 495
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I PS L FVK
Sbjct: 496 ENLPKPATENGVATGAMLDLSYSKLGEWWNVRPDVLITPSLLPPFVKVF 544
>gi|156836867|ref|XP_001642474.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156113008|gb|EDO14616.1| hypothetical protein Kpol_264p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 670
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV-E 76
P ++ V G ++VD+ + M +R R++ H+LQQ+ YYP++P + +
Sbjct: 499 PSTFQLNEVFFGCSNVDLFKDMKEITKGGNTSMRNRFDRVSEHMLQQRRYYPVLPGGIKK 558
Query: 77 LPVDMECWELHAQLP-----------------VTPHIMILPSDLRYFVKAL 110
P+ + + + P ++I+PS+L+YF + +
Sbjct: 559 QPITENGKKRYVHISGADLDVPYLGLTEFIGGFAPDVIIVPSELQYFARVI 609
>gi|119478574|ref|XP_001259389.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
gi|119407543|gb|EAW17492.1| DNA polymerase alpha/primase associated subunit [Neosartorya
fischeri NRRL 181]
Length = 664
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L + V+G+ S DVL L REE P+ L+RL +L++Q+ + P+ PP+
Sbjct: 501 PVTLSFNETVIGMCSYDVLYDLRREEVLHGKPKEGSLLTRLPKYLIEQRHFLPMFPPSSR 560
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I PS L FVK +
Sbjct: 561 ENLPKPATENGVATGAMLDLSYSKLGEWWNVRPDVLITPSLLPPFVKVV 609
>gi|70997197|ref|XP_753352.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
gi|66850988|gb|EAL91314.1| DNA polymerase alpha/primase associated subunit [Aspergillus
fumigatus Af293]
Length = 617
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L + V+G+ S DVL L REE P+ L+RL +L++Q+ + P+ PP+
Sbjct: 436 PVTLSFNETVIGMCSYDVLYDLRREEVLHGKPKEGSLLTRLPKYLIEQRHFLPMFPPSSR 495
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L V P ++I PS L FVK
Sbjct: 496 ENLPKPATENGVATGAMLDLSYSKLGEWWNVRPDVLITPSLLPPFVKVF 544
>gi|121713938|ref|XP_001274580.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
gi|119402733|gb|EAW13154.1| DNA polymerase alpha/primase associated subunit [Aspergillus
clavatus NRRL 1]
Length = 668
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L + V+G+ S DVL L REE P+ + L+RL +L++Q+ + PL P
Sbjct: 502 PVTLSFNETVIGMCSYDVLYDLRREEVLHGRPKEGNLLTRLPKYLIEQRHFMPLFPSTAR 561
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D+ ++L V P ++I PS L FVK
Sbjct: 562 ENLPRPGTENGTATGAMLDVSYFKLGEWWNVRPDVLITPSLLPPFVK 608
>gi|344304974|gb|EGW35206.1| DNA polymerase alpha-primase complex B subunit [Spathaspora
passalidarum NRRL Y-27907]
Length = 592
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 29/122 (23%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLG--REEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP 73
P P I+ V++G +++DV L ++ + +R R+ SHL+ Q+ YYPL P
Sbjct: 407 PNPSSFSINEVLIGNSNLDVFRDLRDVTKDNGTNSVLNNRFERIVSHLIDQRRYYPLFPG 466
Query: 74 NVEL---PVDM-------------------ECWE-----LHAQLPVTPHIMILPSDLRYF 106
++ DM C E L V P I++LPS+L+YF
Sbjct: 467 AIKSQPGSADMTKLLGGASGEYLSQTGIGGSCLEVPYLGLTEIGDVLPDILVLPSELKYF 526
Query: 107 VK 108
K
Sbjct: 527 AK 528
>gi|449301784|gb|EMC97793.1| hypothetical protein BAUCODRAFT_67553 [Baudoinia compniacensis UAMH
10762]
Length = 669
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 29/120 (24%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT----DRLSRLASHLLQQQCYYPLIPP 73
P +L I+ +++ V++ DVL L +E A + D L+RL ++ QQ ++P+ PP
Sbjct: 493 PIMLSINEMILAVSTQDVLSELRKENVYQAGKGQAFNDDLLARLTGAVIDQQHFFPVFPP 552
Query: 74 N--VELP-----------------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
V+LP +D+ +L L V P +++LPS L FVK
Sbjct: 553 QSRVDLPRPATIPGEVPALGEEERMAVGACLDLSYLKLGEWLKVRPDVLVLPSVLNPFVK 612
>gi|302497329|ref|XP_003010665.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
gi|291174208|gb|EFE30025.1| B subunit of DNA polymerase alpha-primase complex [Arthroderma
benhamiae CBS 112371]
Length = 469
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P + ++ ++VG+ + D L L REE P +D LSRL +L++Q+ + P+ PP
Sbjct: 306 PVAISLNEIMVGLCASDSLYELRREEVVGGRPSESDLLSRLPRYLIEQRHFSPVFPPTAR 365
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D +L P I++ PS L FVK +
Sbjct: 366 ENLPKSGVEENLQIGSMLDTRYLKLGDWWKARPDILVTPSVLPGFVKVV 414
>gi|226295381|gb|EEH50801.1| DNA polymerase subunit alpha B [Paracoccidioides brasiliensis Pb18]
Length = 655
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L ++ V G+ S DVL L +EE A P L+RL+ +L++Q+ ++P+ PP
Sbjct: 492 PVTLSLNENVFGMCSHDVLYELRQEEVLAGKPSEGGLLTRLSRYLIEQRHFFPVFPPTSR 551
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D +L V P ++I PS L FVK
Sbjct: 552 ENLPKSGLEGSIATGAMLDTSYMKLGEWWNVRPDVLITPSMLPPFVK 598
>gi|295670609|ref|XP_002795852.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284937|gb|EEH40503.1| DNA polymerase subunit alpha B [Paracoccidioides sp. 'lutzii' Pb01]
Length = 634
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L ++ V G+ S DVL L +EE A P L+RL+ +L++Q+ ++P+ PP
Sbjct: 471 PVTLSLNENVFGMCSHDVLYELRQEEVLAGKPSEGGLLTRLSRYLIEQRHFFPVFPPTSR 530
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D +L V P ++I PS L FVK
Sbjct: 531 ENLPKSGLEGSIATGAMLDTSYLKLGEWWNVRPDVLITPSVLPPFVK 577
>gi|225677496|gb|EEH15780.1| DNA polymerase alpha 70 kDa subunit [Paracoccidioides brasiliensis
Pb03]
Length = 665
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV- 75
P L ++ V G+ S DVL L +EE A P L+RL+ +L++Q+ ++P+ PP
Sbjct: 502 PVTLSLNENVFGMCSHDVLYELRQEEVLAGKPSEGGLLTRLSRYLIEQRHFFPVFPPTSR 561
Query: 76 -ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP +D +L V P ++I PS L FVK
Sbjct: 562 ENLPKSGLEGSIATGAMLDTSYLKLGEWWNVRPDVLITPSMLPPFVK 608
>gi|367015348|ref|XP_003682173.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
gi|359749835|emb|CCE92962.1| hypothetical protein TDEL_0F01510 [Torulaspora delbrueckii]
Length = 666
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 20/111 (18%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIP----- 72
P ++ V G ++VD + M DR R++ H+LQQ+ YYP+ P
Sbjct: 493 PATFQLNEVFFGCSNVDTFKDIKEMPKGGNTSMRDRFDRVSEHILQQRRYYPVFPGGITK 552
Query: 73 ---PNVELPVDMECWELHAQLPV------------TPHIMILPSDLRYFVK 108
PN E + A L V TP I+++PS++ +F K
Sbjct: 553 KLLPNTEGGNKVYEHISGADLDVPYLGLTEFVGNFTPDIILIPSEMNHFAK 603
>gi|212529860|ref|XP_002145087.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
gi|210074485|gb|EEA28572.1| DNA polymerase alpha/primase associated subunit [Talaromyces
marneffei ATCC 18224]
Length = 654
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L +EE P + L+RL ++++Q+ + P+ PP+
Sbjct: 490 PVTLSLNETVIGMCSHDVLYDLRKEEVLGGRPAEANLLTRLPKYIIEQRHFAPMFPPSSR 549
Query: 77 ------------LPV----DMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP+ D+ +L V P I+I PS L FVK +
Sbjct: 550 DTLPKSGGPDSMLPIGGMMDVSYLKLGDWWNVRPDILITPSMLPPFVKVV 599
>gi|240275285|gb|EER38799.1| DNA polymerase alpha [Ajellomyces capsulatus H143]
Length = 633
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 24/127 (18%)
Query: 6 KLLSEDSD--------SKPRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSR 56
KLL D D + P P L ++ V G+ S DVL L +EE P L+R
Sbjct: 484 KLLKRDLDLFQTKQVRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLTR 543
Query: 57 LASHLLQQQCYYPLIPPNV--ELP-------------VDMECWELHAQLPVTPHIMILPS 101
L+ +L++Q+ + P+ PP LP +D +L V P ++I PS
Sbjct: 544 LSRYLIEQRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPS 603
Query: 102 DLRYFVK 108
L FVK
Sbjct: 604 ILPPFVK 610
>gi|365982203|ref|XP_003667935.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
gi|343766701|emb|CCD22692.1| hypothetical protein NDAI_0A05370 [Naumovozyma dairenensis CBS 421]
Length = 705
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIP---PN 74
P ++ G ++VD+ L +R R++ H+LQQ+ YYP+ P N
Sbjct: 534 PSTFQLNETFFGCSNVDIFKDLKEVTKGGETSSRNRFDRISEHILQQRRYYPIFPGGTRN 593
Query: 75 VELPVDMECWELHA----QLP----------VTPHIMILPSDLRYFVKAL 110
V++ + + ++ A ++P VTP +MI PS++ F + +
Sbjct: 594 VKIDKEKKIFKHIAGADLEVPYLGLTEFVGNVTPDVMIFPSEMPRFARVI 643
>gi|315042075|ref|XP_003170414.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
gi|311345448|gb|EFR04651.1| DNA polymerase subunit alpha B [Arthroderma gypseum CBS 118893]
Length = 664
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPP 73
P + ++ ++VG+ + D L L REE + P +D LSRL +L++Q+ + P+ PP
Sbjct: 501 PVAISLNEIMVGLCASDTLYELRREEVVSGRPSESDLLSRLPRYLIEQRHFSPVFPP 557
>gi|225561681|gb|EEH09961.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus G186AR]
Length = 667
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 24/127 (18%)
Query: 6 KLLSEDSD--------SKPRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSR 56
KLL D D + P P L ++ V G+ S DVL L +EE P L+R
Sbjct: 484 KLLKRDLDLFQTKQVRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLTR 543
Query: 57 LASHLLQQQCYYPLIPPNV--ELP-------------VDMECWELHAQLPVTPHIMILPS 101
L+ +L++Q+ + P+ PP LP +D +L V P ++I PS
Sbjct: 544 LSRYLIEQRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPS 603
Query: 102 DLRYFVK 108
L FVK
Sbjct: 604 ILPPFVK 610
>gi|325091120|gb|EGC44430.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
capsulatus H88]
Length = 667
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 24/127 (18%)
Query: 6 KLLSEDSD--------SKPRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSR 56
KLL D D + P P L ++ V G+ S DVL L +EE P L+R
Sbjct: 484 KLLKRDLDLFQTKQVRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLTR 543
Query: 57 LASHLLQQQCYYPLIPPNV--ELP-------------VDMECWELHAQLPVTPHIMILPS 101
L+ +L++Q+ + P+ PP LP +D +L V P ++I PS
Sbjct: 544 LSRYLIEQRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPS 603
Query: 102 DLRYFVK 108
L FVK
Sbjct: 604 ILPPFVK 610
>gi|154283103|ref|XP_001542347.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410527|gb|EDN05915.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 626
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 24/127 (18%)
Query: 6 KLLSEDSD--------SKPRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSR 56
KLL D D + P P L ++ V G+ S DVL L +EE P L+R
Sbjct: 443 KLLKRDLDLFQTKQVRTVPNPVTLSLNENVFGMCSHDVLYELRQEEVLGGRPSEGGLLTR 502
Query: 57 LASHLLQQQCYYPLIPPNV--ELP-------------VDMECWELHAQLPVTPHIMILPS 101
L+ +L++Q+ + P+ PP LP +D +L V P ++I PS
Sbjct: 503 LSRYLIEQRHFLPVFPPTARGNLPKSGVEGGLATGAMLDTSYLKLGEWWNVRPDVLITPS 562
Query: 102 DLRYFVK 108
L FVK
Sbjct: 563 ILPPFVK 569
>gi|452985626|gb|EME85382.1| hypothetical protein MYCFIDRAFT_42760 [Pseudocercospora fijiensis
CIRAD86]
Length = 661
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV-- 75
P L I+ +VVG++S DVL + R D + RLA H+++Q Y+P+ PP
Sbjct: 489 PMALSINEMVVGMSSQDVLSEI-RSGNVYHKVDGDMMGRLAGHVIEQSHYFPVFPPQARE 547
Query: 76 ----------ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+P +D+ ++L P ++ILPS L F +
Sbjct: 548 DLPKPTGIEGEIPEPGGEERYAMGANIDLAYYKLGEFWLARPDVLILPSTLMPFAR 603
>gi|294659121|ref|XP_461461.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
gi|202953633|emb|CAG89880.2| DEHA2F25806p [Debaryomyces hansenii CBS767]
Length = 702
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 37/131 (28%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPE-----MTDRLSRLASHLLQQQCYYPL 70
P P I+ V+VG +++D+ L ++ F A + + +R R+A+H+ +Q+ YYP+
Sbjct: 505 PNPSSFSINEVLVGCSNLDIFKDL-KDVFKGATDGNSKFLNNRFERIANHVFEQRRYYPV 563
Query: 71 IPPNVELPV-----DMECWELHAQL--------------------------PVTPHIMIL 99
P +++ + D LH L P I+++
Sbjct: 564 FPGSMKKNMVSKDNDDSATSLHEGLMGEELTDTGIGGSSLEVPYMGLTELGDSLPDILVI 623
Query: 100 PSDLRYFVKAL 110
PS+L++FVK +
Sbjct: 624 PSELKFFVKVI 634
>gi|255729866|ref|XP_002549858.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
gi|240132927|gb|EER32484.1| hypothetical protein CTRG_04155 [Candida tropicalis MYA-3404]
Length = 670
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 30/124 (24%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM---TDRLSRLASHLLQQQCYYPLIP 72
P P I+ +++G +++D+ L R+ F E+ ++R R+ +H+ +Q+ YYP P
Sbjct: 481 PNPSSFQINEILIGNSNLDIFKDL-RDVFKEDTEVLSNSNRFERIINHMFEQRRYYPAFP 539
Query: 73 ---------PNVELPVDMECWELHA-----------QLPVT------PHIMILPSDLRYF 106
N EL E L L +T P I+ILPS+L+YF
Sbjct: 540 GSIAHQPKTSNTELFNGAEGEHLDGLTVGGSSLETPYLGLTELGDSLPDILILPSELKYF 599
Query: 107 VKAL 110
K +
Sbjct: 600 AKVV 603
>gi|242762029|ref|XP_002340296.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
gi|218723492|gb|EED22909.1| DNA polymerase alpha/primase associated subunit [Talaromyces
stipitatus ATCC 10500]
Length = 650
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 17/110 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L +EE P + L+RL ++++Q+ + P+ PP+
Sbjct: 486 PVTLSLNESVIGMCSHDVLYDLRKEEVLGGRPAEANLLTRLPKYIIEQRHFAPMFPPSSR 545
Query: 77 ------------LPV----DMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP+ D+ +L V P I+I PS L FVK +
Sbjct: 546 DSLPKSGGLDSMLPIGGMMDVSYLKLGDWWNVRPDILITPSLLPPFVKVV 595
>gi|367006837|ref|XP_003688149.1| hypothetical protein TPHA_0M01400 [Tetrapisispora phaffii CBS 4417]
gi|357526456|emb|CCE65715.1| hypothetical protein TPHA_0M01400 [Tetrapisispora phaffii CBS 4417]
Length = 667
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P ++ V G ++VD+ L M +R R++ H+LQQ+ YYP+ P +
Sbjct: 496 PSTFQLNEVFFGCSNVDIYKDLKEVAKGGNTAMRNRFDRVSEHVLQQRRYYPVFPGGIRK 555
Query: 78 P----------------VDMECWELHAQL---PVTPHIMILPSDLRYFVKAL 110
D+E L ++P ++I+PS++++F + +
Sbjct: 556 TAKILENKKKVIEHISGADLEVPYLGLTEFVGEISPDVIIMPSEMQHFARVV 607
>gi|429966415|gb|ELA48412.1| hypothetical protein VCUG_00021 [Vavraia culicis 'floridensis']
Length = 447
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 47 APEMTDRLSRLASHLLQQQCYYPLIPPNVELPVDM-ECWELHAQLPVTPHIMILPSDLRY 105
A + T R+ RL++H++ Q+C+ P PP + ++ EC++ + V P ++ S L+
Sbjct: 342 AQKRTKRIERLSAHIIYQRCFLPCFPPRKVVSINRSECFD----MSVAPDFFVICSKLKT 397
Query: 106 FVK 108
F++
Sbjct: 398 FIQ 400
>gi|400600867|gb|EJP68535.1| DNA polymerase alpha/epsilon subunit B [Beauveria bassiana ARSEF
2860]
Length = 681
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFA-------AAPEMTDRLSRLASHLLQQQCYYPL 70
P L I+ +V+GV+S D L L EE + + D ++RL HL++Q+ ++P+
Sbjct: 516 PMTLSINELVLGVSSQDALWELRAEELSKVGAALSSGGGGGDLMARLCRHLVEQRHFHPV 575
Query: 71 IPPN--VELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
PP LP +D+ +L + V P +++ PS L F K
Sbjct: 576 YPPTDRARLPRTGTAEGTATGAVLDVSYLKLGEMVNVRPDVLLTPSALPPFAK 628
>gi|317035177|ref|XP_001401243.2| DNA polymerase alpha/primase associated subunit [Aspergillus niger
CBS 513.88]
Length = 660
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P + L+RL ++++Q+ + P+ P +
Sbjct: 499 PVTLSLNETVIGMCSHDVLYELRREEVLHGKPTEGNLLTRLPKYMIEQRHFQPMFPTSSR 558
Query: 77 --LP-----------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP VD+ +L V P ++I PS L FVK +
Sbjct: 559 DMLPRAGTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVKVV 605
>gi|398407609|ref|XP_003855270.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
gi|339475154|gb|EGP90246.1| hypothetical protein MYCGRDRAFT_91224 [Zymoseptoria tritici IPO323]
Length = 672
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEF---AAAPEMT-------DRLSRLASHLLQQQCY 67
P L ++ +++G TS DVL L RE AA T D L+RL+ H+L+Q +
Sbjct: 489 PICLSLNEILLGTTSTDVLSELRRENVYHNAAQNGRTNGLGITDDILARLSGHILEQSHF 548
Query: 68 YPLIPP 73
+P+ PP
Sbjct: 549 FPVFPP 554
>gi|134081927|emb|CAK97193.1| unnamed protein product [Aspergillus niger]
Length = 609
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P + L+RL ++++Q+ + P+ P +
Sbjct: 438 PVTLSLNETVIGMCSHDVLYELRREEVLHGKPTEGNLLTRLPKYMIEQRHFQPMFPTSSR 497
Query: 77 --LP-----------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP VD+ +L V P ++I PS L FVK +
Sbjct: 498 DMLPRAGTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVKVV 544
>gi|350639647|gb|EHA28001.1| DNA polymerase [Aspergillus niger ATCC 1015]
Length = 650
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P + L+RL ++++Q+ + P+ P +
Sbjct: 489 PVTLSLNETVIGMCSHDVLYELRREEVLHGKPTEGNLLTRLPKYMIEQRHFQPMFPTSSR 548
Query: 77 --LP-----------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP VD+ +L V P ++I PS L FVK +
Sbjct: 549 DMLPRAGTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVKVV 595
>gi|358374849|dbj|GAA91438.1| DNA polymerase alpha/primase associated subunit [Aspergillus
kawachii IFO 4308]
Length = 642
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P L ++ V+G+ S DVL L REE P + L+RL ++++Q+ + P+ P +
Sbjct: 489 PVTLSLNETVIGMCSHDVLYELRREEVIHGKPTEGNLLTRLPKYMIEQRHFQPMFPTSSR 548
Query: 77 --LP-----------VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
LP VD+ +L V P ++I PS L FVK
Sbjct: 549 DMLPRAGTGLATGGMVDVSYSKLGEWWNVRPDVLITPSMLPPFVK 593
>gi|388853594|emb|CCF52766.1| related to DNA polymerase alpha 70 kDa subunit [Ustilago hordei]
Length = 735
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 22/108 (20%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF--------------------AAAPEMTDRLS 55
P P V ++ +V+G T+ D L L EEF A A + + +
Sbjct: 564 PNPSVFYVNELVLGTTTADSLGDLKSEEFVTRIESSPHRNPNLPIAVAEAVAGKNKEPNT 623
Query: 56 RLASHLLQQQCYYPLIPP--NVELPVDMECWELHAQLPVTPHIMILPS 101
R + ++ Q+ +YPL PP + L D L VTP ++ILPS
Sbjct: 624 RYSRSIISQRSFYPLFPPPTSSNLAYDTSHSHLLNFPAVTPDLLILPS 671
>gi|367037905|ref|XP_003649333.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
gi|346996594|gb|AEO62997.1| hypothetical protein THITE_2107832 [Thielavia terrestris NRRL 8126]
Length = 515
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT---DRLSRLASHLLQQQCYYPLIP 72
P L I+ V+G++S DVL L EE + D LSR + +LL+Q+ Y+PL P
Sbjct: 338 PMTLSINEAVLGISSQDVLWELRHEELVGGAAVAAAPDVLSRASRYLLEQRHYFPLFP 395
>gi|396477047|ref|XP_003840181.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
gi|312216752|emb|CBX96702.1| similar to DNA polymerase alpha/primase associated subunit
[Leptosphaeria maculans JN3]
Length = 692
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRL-SRLASHLLQQQCYYPLIPP 73
P L ++ + VG++S+D+L L REE T L R A +LL+Q+ + P+ PP
Sbjct: 503 PMTLSMNELTVGMSSIDILDMLRREELTGGTAKTVNLYERCARNLLEQRNFLPVFPP 559
>gi|302688247|ref|XP_003033803.1| hypothetical protein SCHCODRAFT_233383 [Schizophyllum commune H4-8]
gi|300107498|gb|EFI98900.1| hypothetical protein SCHCODRAFT_233383 [Schizophyllum commune H4-8]
Length = 877
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF----AAAPEMTDRLSRLASHLLQQQCYYPLI 71
P P I+GV TS + + HL E A PE D ++ L +L+Q+ +YPL
Sbjct: 553 PNPARFAINGVSFAATSAETVFHLQAERLLKRGAGPPESGDPVANLYRVMLEQRSFYPLF 612
Query: 72 P 72
P
Sbjct: 613 P 613
>gi|190408861|gb|EDV12126.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae RM11-1a]
Length = 705
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 521 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 580
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 581 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 640
Query: 107 VKAL 110
+ +
Sbjct: 641 ARVV 644
>gi|239781862|pdb|3FLO|A Chain A, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781865|pdb|3FLO|C Chain C, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781868|pdb|3FLO|E Chain E, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
gi|239781871|pdb|3FLO|G Chain G, Crystal Structure Of The Carboxyl-Terminal Domain Of Yeast
Dna Polymerase Alpha In Complex With Its B Subunit
Length = 460
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 276 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 335
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 336 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 395
Query: 107 VKAL 110
+ +
Sbjct: 396 ARVV 399
>gi|349576345|dbj|GAA21516.1| K7_Pol12p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 705
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 521 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 580
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 581 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 640
Query: 107 VKAL 110
+ +
Sbjct: 641 ARVV 644
>gi|151946359|gb|EDN64581.1| DNA polymerase alpha-primase complex B subunit [Saccharomyces
cerevisiae YJM789]
Length = 705
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 521 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 580
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 581 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 640
Query: 107 VKAL 110
+ +
Sbjct: 641 ARVV 644
>gi|6319436|ref|NP_009518.1| Pol12p [Saccharomyces cerevisiae S288c]
gi|585063|sp|P38121.1|DPOA2_YEAST RecName: Full=DNA polymerase alpha subunit B; AltName: Full=DNA
polymerase I subunit B; AltName: Full=DNA polymerase
alpha:primase complex p86 subunit; Short=Pol
alpha-primase complex p86 subunit; AltName: Full=DNA
polymerase-primase complex p74 subunit
gi|511143|emb|CAA52761.1| unnamed protein product [Saccharomyces cerevisiae]
gi|536045|emb|CAA84855.1| POL12 [Saccharomyces cerevisiae]
gi|285810299|tpg|DAA07084.1| TPA: Pol12p [Saccharomyces cerevisiae S288c]
gi|392301181|gb|EIW12270.1| Pol12p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|1583516|prf||2120451C ORF YBL0415
Length = 705
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 521 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 580
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 581 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 640
Query: 107 VKAL 110
+ +
Sbjct: 641 ARVV 644
>gi|256272739|gb|EEU07712.1| Pol12p [Saccharomyces cerevisiae JAY291]
gi|259144812|emb|CAY77751.1| Pol12p [Saccharomyces cerevisiae EC1118]
Length = 705
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 521 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 580
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 581 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 640
Query: 107 VKAL 110
+ +
Sbjct: 641 ARVV 644
>gi|365767038|gb|EHN08526.1| Pol12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 705
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 521 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 580
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 581 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 640
Query: 107 VKAL 110
+ +
Sbjct: 641 ARVV 644
>gi|207347854|gb|EDZ73899.1| YBL035Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 634
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 450 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 509
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 510 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 569
Query: 107 VKAL 110
+ +
Sbjct: 570 ARVV 573
>gi|323356256|gb|EGA88060.1| Pol12p [Saccharomyces cerevisiae VL3]
Length = 550
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 366 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 425
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 426 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 485
Query: 107 VKAL 110
+ +
Sbjct: 486 ARVV 489
>gi|323338794|gb|EGA80009.1| Pol12p [Saccharomyces cerevisiae Vin13]
Length = 565
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 381 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 440
Query: 78 PV------------DMECWELH-------AQLPV------------TPHIMILPSDLRYF 106
+ DME E A L V +P IMI+PS+L++F
Sbjct: 441 RIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQHF 500
Query: 107 VKAL 110
+ +
Sbjct: 501 ARVV 504
>gi|255715665|ref|XP_002554114.1| KLTH0E14608p [Lachancea thermotolerans]
gi|238935496|emb|CAR23677.1| KLTH0E14608p [Lachancea thermotolerans CBS 6340]
Length = 653
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIP----- 72
P ++ + VG ++VD + A +R R+A H+L Q+ +YPL P
Sbjct: 481 PSTFQLNELFVGCSNVDAFKDIKEVVKGGATCSKNRFDRIAEHILSQRRFYPLFPGALKR 540
Query: 73 PNVELPVDMECWE--LHAQLPVT------------PHIMILPSDLRYFVKAL 110
+ L + WE A L V+ P ++I+PS+L YF + +
Sbjct: 541 RKLRLEDGHDVWEHVSGADLEVSYLGLTEFVANLLPDLVIIPSELSYFTRVV 592
>gi|440493809|gb|ELQ76235.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Trachipleistophora hominis]
Length = 483
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 48 PEMTDRLSRLASHLLQQQCYYPLIPPNVELPVDM-ECWELHAQLPVTPHIMILPSDLRYF 106
P+ + R+ RL++H++ Q+ + P PP + ++ EC++++ + P I+ S L+ F
Sbjct: 379 PKKSKRIERLSAHMIYQRSFLPCFPPRNIVSINRPECFDMN----IAPDFFIISSKLKTF 434
Query: 107 VK 108
++
Sbjct: 435 IQ 436
>gi|149247859|ref|XP_001528317.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448271|gb|EDK42659.1| hypothetical protein LELG_00837 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 673
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTD----RLSRLASHLLQQQCYYPLI 71
P P ++ ++VG +++DV L R+ + E D R R+ +H+ Q+ YYP++
Sbjct: 470 PNPSSFAVNEILVGSSNLDVFKDL-RDVYKETKENVDISSNRFERIINHIFDQKRYYPVM 528
Query: 72 PPNV 75
P ++
Sbjct: 529 PGSI 532
>gi|327352151|gb|EGE81008.1| hypothetical protein BDDG_03949 [Ajellomyces dermatitidis ATCC
18188]
Length = 496
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P P L ++ V G+ S DVL L +EE P L+RL+ +L++Q+ + P+ P +
Sbjct: 331 PNPVTLSLNENVFGMCSHDVLFELRQEEVVGGKPSEGGLLTRLSRYLIEQRHFLPVFPTS 390
Query: 75 V--ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L P ++I PS L FVK +
Sbjct: 391 ARENLPKSGFEGGLATGAMLDINYLKLGEWWNARPDVLITPSILPPFVKVV 441
>gi|224000732|ref|XP_002290038.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973460|gb|EED91790.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 715
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 30 VTSVDVLMHLGREEFAAAPEM--TDRLSRLASHLLQQQCY-YPLIPPNVELPVDMECWEL 86
V +V++L HL E+ A M +R+ R+ H L++ C+ + L+PPNV LP ++ +
Sbjct: 321 VRTVEILEHLRVEQQAIKKSMEEVERVFRMRKHKLEELCWGHSLLPPNVSLPSLIKSNDD 380
Query: 87 HAQLPVT 93
+ +P T
Sbjct: 381 NQNVPYT 387
>gi|261189697|ref|XP_002621259.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
gi|239591495|gb|EEQ74076.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis SLH14081]
Length = 667
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P P L ++ V G+ S DVL L +EE P L+RL+ +L++Q+ + P+ P +
Sbjct: 502 PNPVTLSLNENVFGMCSHDVLFELRQEEVVGGKPSEGGLLTRLSRYLIEQRHFLPVFPTS 561
Query: 75 V--ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L P ++I PS L FVK +
Sbjct: 562 ARENLPKSGVEGGLATGAMLDINYLKLGEWWNARPDVLITPSILPPFVKVV 612
>gi|239612976|gb|EEQ89963.1| DNA polymerase alpha/primase associated subunit [Ajellomyces
dermatitidis ER-3]
Length = 667
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREE-FAAAPEMTDRLSRLASHLLQQQCYYPLIPPN 74
P P L ++ V G+ S DVL L +EE P L+RL+ +L++Q+ + P+ P +
Sbjct: 502 PNPVTLSLNENVFGMCSHDVLFELRQEEVVGGKPSEGGLLTRLSRYLIEQRHFLPVFPTS 561
Query: 75 V--ELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
LP +D+ +L P ++I PS L FVK +
Sbjct: 562 ARENLPKSGFEGGLATGAMLDINYLKLGEWWNARPDVLITPSILPPFVKVV 612
>gi|150865942|ref|XP_001385361.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
gi|149387198|gb|ABN67332.2| DNA polymerase alpha-primase complex B subunit [Scheffersomyces
stipitis CBS 6054]
Length = 685
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLG--REEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP 73
P P + ++ V++ +++DV L +E ++R R+A+H+ +Q+ +YP+ P
Sbjct: 492 PNPSSVSVNEVLIANSNLDVFKDLKDVHQENPEGKSFSNRFERIANHIFEQRRFYPVFPG 551
Query: 74 NVELPVDMECW---ELH-----AQLPVT---------------------PHIMILPSDLR 104
+++ + ELH +L T P I+I PSDL+
Sbjct: 552 SIKRVTPFQTATPPELHEGIMGKELSFTSVGGPSLEVPYLGLTELGDSLPDILISPSDLK 611
Query: 105 YFVKAL 110
FVK +
Sbjct: 612 SFVKVI 617
>gi|50553420|ref|XP_504121.1| YALI0E18832p [Yarrowia lipolytica]
gi|49649990|emb|CAG79716.1| YALI0E18832p [Yarrowia lipolytica CLIB122]
Length = 608
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 15 KPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIP-P 73
+ P I+ ++ G ++D++ + + E + D +SR ++++Q+ YPL+P P
Sbjct: 454 RTNPAQFSINELMFGTANLDIVRAVAQSELNKGSQ-EDFMSRAGRYVVEQRSLYPLLPGP 512
Query: 74 NVELP-------------VDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+ P +D L + V+P I+I+PS ++ FV+ +
Sbjct: 513 QAKQPGVAEENQTLTYHHLDKAYLGLCDFVDVSPDIIIMPSQVQAFVRVV 562
>gi|451851852|gb|EMD65150.1| hypothetical protein COCSADRAFT_141761 [Cochliobolus sativus
ND90Pr]
Length = 695
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-PEMTDRLSRLASHLLQQQCYYPLIPP 73
P + ++ + VG++S+D L L REE A T+ R A +L++Q+ + PL PP
Sbjct: 503 PMTVSMNEMTVGMSSLDNLDMLRREELAGGKARATNIYERCARNLIEQRSFLPLFPP 559
>gi|323334744|gb|EGA76117.1| Pol12p [Saccharomyces cerevisiae AWRI796]
Length = 550
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 366 PSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 425
Query: 78 PV------------DMECWELHAQLPV-------------------TPHIMILPSDLRYF 106
+ DME E + +P IMI+PS+L++F
Sbjct: 426 RIKPKDVSTKKETNDMESKEEKVYEHISGTDLDVSYLGLTEFVGGFSPDIMIIPSELQHF 485
Query: 107 VKAL 110
+ +
Sbjct: 486 ARVV 489
>gi|444315936|ref|XP_004178625.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
gi|387511665|emb|CCH59106.1| hypothetical protein TBLA_0B02640 [Tetrapisispora blattae CBS 6284]
Length = 673
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 21/114 (18%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ G ++VDV + + +R R++ H+L Q+ +YP+ P ++
Sbjct: 498 PATFQINESFFGCSNVDVFKDMKEVTKGGTITLRNRFDRISEHVLNQRRFYPVFPGGIKK 557
Query: 78 PV-------DMECWE--LHAQLPV------------TPHIMILPSDLRYFVKAL 110
+ D + +E A L V TP +MI+PS+L+ F + +
Sbjct: 558 KLISSSDSKDKKIYEHLSGADLEVAYLGLTEFVSSFTPDVMIIPSELQQFARVI 611
>gi|448511801|ref|XP_003866617.1| Pol12 protein [Candida orthopsilosis Co 90-125]
gi|380350955|emb|CCG21178.1| Pol12 protein [Candida orthopsilosis Co 90-125]
Length = 645
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMT-DRLSRLASHLLQQQCYYPLIPPN 74
P P ++ V++G +++D+ L +E F +++ +R R+ H+ QQ+ YYP+IP +
Sbjct: 457 PNPSSFAVNEVLIGSSNLDLFKDL-KEVFKQDEKLSKNRFERVIDHIFQQRRYYPVIPGS 515
Query: 75 VELPVDMECWEL-----------------HAQLPV---------TPHIMILPSDLRYFVK 108
+ + + L + P P ++ILPS+L+ F K
Sbjct: 516 IARTSEHDISHLTNGAAGENLNGVSVGGSSLETPYLGLTELGNSLPDVLILPSELKVFAK 575
Query: 109 AL 110
+
Sbjct: 576 VV 577
>gi|366988531|ref|XP_003674032.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
gi|342299895|emb|CCC67651.1| hypothetical protein NCAS_0A10930 [Naumovozyma castellii CBS 4309]
Length = 679
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 17/110 (15%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P ++ G +++D+ L DR R++ H+LQQ+ YYPL P
Sbjct: 510 PSTFQLNEAFFGCSNIDIFKDLVETTKGGLTFSRDRFDRISEHILQQRRYYPLFPGKTRE 569
Query: 78 PVDMECWELHAQLP-----------------VTPHIMILPSDLRYFVKAL 110
+ + +++ + V P +MI PS+L F + +
Sbjct: 570 ILASKEKKIYKHIAGADLEIPYLGLTEFVGNVAPDVMIFPSELPCFARVV 619
>gi|453087977|gb|EMF16018.1| DNA polymerase alpha, subunit B [Mycosphaerella populorum SO2202]
Length = 665
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAA-----PEMTDRLSRLASHLLQQQCYYPLIP 72
P L ++ ++ G++S DVL L R A + P D L+RL+ +++Q Y+P+ P
Sbjct: 487 PMALFLNEMIFGMSSQDVLSELHRSSAAQSATGDKPLNNDLLARLSEQIIEQSHYFPIFP 546
Query: 73 P 73
P
Sbjct: 547 P 547
>gi|328769006|gb|EGF79051.1| hypothetical protein BATDEDRAFT_12741 [Batrachochytrium
dendrobatidis JAM81]
Length = 501
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 20/113 (17%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEF----------------AAAPEMTDRLSRLAS 59
P P ++ +V V++ D++ L ++ ++A + DRLS +
Sbjct: 328 PNPVQFRLNEIVFAVSTSDIVFDLAESQYMCRSGPKTHLKSFGNDSSAGHVLDRLSTCFN 387
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLP----VTPHIMILPSDLRYFVK 108
H+L+ + +YP+ P + +D + P V P I+I+ S L+Y +
Sbjct: 388 HVLRHRSFYPMFPSSSNACLDSTHQDGEYAGPLILQVIPDILIVSSRLQYMAR 440
>gi|354546489|emb|CCE43219.1| hypothetical protein CPAR2_208640 [Candida parapsilosis]
Length = 642
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 28/122 (22%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTD-RLSRLASHLLQQQCYYPLIPPN 74
P P ++ +++G +++D+ L +E F ++++ R R+ HL +Q+ YYP++P +
Sbjct: 454 PNPSSFAVNEILIGSSNLDLFKDL-KEVFKNDGKLSNNRFERVIGHLFEQRRYYPIMPGS 512
Query: 75 VELPVDMECWELH--------------------AQLPVT------PHIMILPSDLRYFVK 108
+ + + EL L +T P ++ILPS+L+ F K
Sbjct: 513 IAKTHEQDISELSNGAAGEKLTGVSVGGSSLETPYLGLTELGNSLPDVLILPSELKVFAK 572
Query: 109 AL 110
+
Sbjct: 573 VV 574
>gi|410082157|ref|XP_003958657.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
gi|372465246|emb|CCF59522.1| hypothetical protein KAFR_0H01120 [Kazachstania africana CBS 2517]
Length = 679
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 31/59 (52%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P ++ ++VD+ + M++R R+++HLLQQ+ +YP+ P +++
Sbjct: 505 PSTFQLNETFFSCSNVDIFKDMKEVTKGGKTSMSNRFDRISTHLLQQRRFYPVFPGSIK 563
>gi|169614421|ref|XP_001800627.1| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
gi|160707341|gb|EAT82686.2| hypothetical protein SNOG_10351 [Phaeosphaeria nodorum SN15]
Length = 671
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRL-SRLASHLLQQQCYYPLIPP 73
P L ++ + VG++S+D+L L REE + + R A ++++Q+ + PL PP
Sbjct: 503 PMTLSMNEMTVGMSSIDILDMLRREELVSEKSRGINIYERCARNVIEQRSFLPLFPP 559
>gi|281204243|gb|EFA78439.1| hypothetical protein PPL_09091 [Polysphondylium pallidum PN500]
Length = 606
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 61 LLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRY 105
++QQQ YYPL P E+P++M W L TP++M+ S +
Sbjct: 515 IIQQQNYYPLHPS--EIPIEMANWNLMKFPGFTPNLMLFGSKTHF 557
>gi|443894558|dbj|GAC71906.1| DNA polymerase alpha-primase complex, polymerase-associated subunit
B [Pseudozyma antarctica T-34]
Length = 711
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFA----AAPEMT------------DRLSRLAS 59
P P I+ +VVG T+ D L + EE A+P +T + +R +
Sbjct: 547 PNPSTFYINELVVGATTADSLGDIKAEEMVTRIEASPNITVVPTEAVAARNKETNTRWSR 606
Query: 60 HLLQQQCYYPLIPP--NVELPVDMECWELHAQLPVTPHIMILPS 101
+L Q+ +YPL PP + L D L V+P +++LPS
Sbjct: 607 AVLSQRSFYPLYPPPTSARLAYDTSHSHLLNFPAVSPDLLLLPS 650
>gi|363755740|ref|XP_003648085.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892121|gb|AET41268.1| hypothetical protein Ecym_7448 [Eremothecium cymbalariae
DBVPG#7215]
Length = 652
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 16/75 (21%)
Query: 52 DRLSRLASHLLQQQCYYPLIPPNVEL-------------PVDMECWELHAQLPV---TPH 95
+RL R+A H+LQQ+ +YPL P N+ D+E L V P
Sbjct: 518 NRLDRVAEHILQQRRFYPLFPGNINTCKTSDDGTREHISGADLEVPYLGLTEFVGDFIPD 577
Query: 96 IMILPSDLRYFVKAL 110
++I+PS+L +F + +
Sbjct: 578 VIIIPSELTHFARVV 592
>gi|399218427|emb|CCF75314.1| unnamed protein product [Babesia microti strain RI]
Length = 567
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 5 NKLLSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQ 64
N + S++ P P L ++ V++G+TS D + + R PE L+ + LLQQ
Sbjct: 399 NLITSDNLIYLPNPGYLRVNEVIIGITSCDPITSISR-NMVCRPE-DKALNLICQQLLQQ 456
Query: 65 QCYYPLIPPNVELPVD--MECWEL-HAQLPVT--PHIMILPSDLR 104
+ ++P P + +LP + +E +L H + P PH+ + S+ +
Sbjct: 457 RSFFPNYPSS-KLPSEYAIEVNKLRHLEFPSQYLPHLYLFSSNYK 500
>gi|401626719|gb|EJS44644.1| pol12p [Saccharomyces arboricola H-6]
Length = 706
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 31/124 (25%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P I+ + G ++VD L RL R++ H+LQQ+ YYP+ P ++
Sbjct: 522 PASFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYRLDRVSEHILQQRRYYPIFPGSIRT 581
Query: 78 PVDMECWELHAQLPVT-------------------------------PHIMILPSDLRYF 106
+ + ++ T P IMI+PS+L++F
Sbjct: 582 RIKSNSTSVKNEVNNTKNSEKKVYEHISGADLDVSYLGLTEFVGGFSPDIMIIPSELQFF 641
Query: 107 VKAL 110
+ +
Sbjct: 642 ARVV 645
>gi|238611749|ref|XP_002398047.1| hypothetical protein MPER_01418 [Moniliophthora perniciosa FA553]
gi|215473774|gb|EEB98977.1| hypothetical protein MPER_01418 [Moniliophthora perniciosa FA553]
Length = 144
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 13/63 (20%)
Query: 16 PRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEM-------------TDRLSRLASHLL 62
P P I+GV TSVDVL HL +EE E +D + L HLL
Sbjct: 81 PNPTHFSINGVTFASTSVDVLFHLRKEEVLKRGENVDPVTPVIPEDTGSDPMGNLCRHLL 140
Query: 63 QQQ 65
QQ+
Sbjct: 141 QQR 143
>gi|254585985|ref|XP_002498560.1| ZYRO0G13200p [Zygosaccharomyces rouxii]
gi|238941454|emb|CAR29627.1| ZYRO0G13200p [Zygosaccharomyces rouxii]
Length = 651
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE- 76
P ++ V G ++VD+ + + +R R++ HLLQQ+ +YP+ P V
Sbjct: 478 PSTFQLNEVFFGCSNVDIFKDMKEVTRGGNIFLRNRFDRISEHLLQQRRFYPVFPGGVRK 537
Query: 77 --LPVDMECWELH-----AQLPV------------TPHIMILPSDLRYFVKAL 110
LP + A L V P I+++PS+L F + +
Sbjct: 538 KLLPSSTNSERTYQHISGADLEVAYMGLTEFVDGFAPDIIVIPSELPQFARVV 590
>gi|330931777|ref|XP_003303534.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
gi|311320427|gb|EFQ88380.1| hypothetical protein PTT_15776 [Pyrenophora teres f. teres 0-1]
Length = 694
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRL-SRLASHLLQQQCYYPLIPPNVE 76
P + ++ + V ++S+D L L REE A T + R A ++++Q+ + PL PP
Sbjct: 503 PMTVSMNEMTVAMSSIDNLDMLRREELAGGKARTTNIYERCARNVIEQRSFLPLFPPTGR 562
Query: 77 -----LPVDME 82
+PV +E
Sbjct: 563 EKQQFMPVSIE 573
>gi|170759050|ref|YP_001787263.1| protein gp15 [Clostridium botulinum A3 str. Loch Maree]
gi|169406039|gb|ACA54450.1| putative phage gp15 protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 197
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 65 QCYYPLIPPNVELPVDMECWELHAQLPVTP 94
Q YYP+IPPN+ L VD W +TP
Sbjct: 51 QLYYPVIPPNINLAVDKMLWFYRCGKDITP 80
>gi|378754738|gb|EHY64767.1| hypothetical protein NERG_02170 [Nematocida sp. 1 ERTm2]
Length = 389
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 17 RPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVE 76
P ++ +GV++ +T++DVL+ + R+E + +R+ + H + Q + P IP +V
Sbjct: 268 NPSMVCFNGVLLALTTLDVLLGISRKE--VSRNRGERMDDILVHSVYQSTFLPFIPQDV- 324
Query: 77 LPVDMECWELHAQL-PVTPHIMILPSDL 103
PVD + +A L +P + I P+ L
Sbjct: 325 -PVDYSVF--NAFLWAYSPDMYIFPTCL 349
>gi|408373638|ref|ZP_11171333.1| hypothetical protein A11A3_06121 [Alcanivorax hongdengensis
A-11-3]
gi|407766565|gb|EKF75007.1| hypothetical protein A11A3_06121 [Alcanivorax hongdengensis
A-11-3]
Length = 443
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 18 PWVLDISGVVVGVT------------SVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQ 65
PW+L I + +G+ SV V H+ FAAA + +R + + +L
Sbjct: 5 PWILAILAIALGIGYYSLTEPVSYMRSVPVDSHIRNNPFAAAQQFLERQGQTSRRILSGA 64
Query: 66 CYYPLIPPNVELPVDMECWEL 86
+PL NV L +D + EL
Sbjct: 65 SLFPLPDTNVTLVIDKQRGEL 85
>gi|390604884|gb|EIN14275.1| hypothetical protein PUNSTDRAFT_129907 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 652
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 6 KLLSEDSDSKPRPWV----LDISGV---VVGVTSVDVLMH-LGREEFAAAPEMTDRLSRL 57
+L+ ED SKP PWV +++ GV V+ ++ +H L E+ P R SR
Sbjct: 173 QLMHEDQKSKPEPWVKVRWINVGGVSWDVIKALALRYNLHPLAVEDVLHTP----RHSRS 228
Query: 58 ASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLR 104
S Q + ++ ++ P D E E H Q+ PH LP++LR
Sbjct: 229 KSDYYNQHLFLRVLCHSLAGPNDREPHE-HDQINF-PHAHDLPAELR 273
>gi|189200140|ref|XP_001936407.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983506|gb|EDU48994.1| DNA polymerase alpha 70 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 694
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 18 PWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRL-SRLASHLLQQQCYYPLIPP 73
P + ++ + V ++S+D L L +EE A T + R A ++++Q+ + PL PP
Sbjct: 503 PMTVSMNEMTVAMSSIDNLDMLRKEELAGGKARTTNIYERCARNVIEQRSFLPLFPP 559
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,771,252,458
Number of Sequences: 23463169
Number of extensions: 65744483
Number of successful extensions: 178705
Number of sequences better than 100.0: 351
Number of HSP's better than 100.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 178239
Number of HSP's gapped (non-prelim): 380
length of query: 110
length of database: 8,064,228,071
effective HSP length: 78
effective length of query: 32
effective length of database: 6,234,100,889
effective search space: 199491228448
effective search space used: 199491228448
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)