Query psy151
Match_columns 110
No_of_seqs 103 out of 211
Neff 5.6
Searched_HMMs 13730
Date Fri Aug 16 20:36:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy151.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/151hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kyqa2 e.37.1.1 (A:151-273) B 55.0 3.8 0.00028 26.4 2.6 27 49-75 89-115 (123)
2 d1nvma1 a.5.7.1 (A:291-341) 4- 45.8 5.6 0.00041 22.1 1.9 36 28-65 15-50 (51)
3 d1m6ya1 a.60.13.1 (A:115-215) 42.9 5.5 0.0004 24.5 1.8 37 29-65 21-61 (101)
4 d1y81a1 c.2.1.8 (A:6-121) Hypo 38.3 7 0.00051 24.1 1.8 48 51-99 13-62 (116)
5 d1pjqa3 e.37.1.1 (A:114-215) S 37.4 11 0.00079 22.8 2.6 28 18-45 1-31 (102)
6 d1wg8a1 a.60.13.1 (A:109-206) 30.2 4.1 0.0003 25.1 -0.5 42 29-70 19-63 (98)
7 d1v97a2 d.15.4.2 (A:3-92) Xant 23.8 21 0.0015 21.3 2.1 19 16-34 1-19 (90)
8 d1pu6a_ a.96.1.5 (A:) 3-Methyl 23.1 26 0.0019 23.7 2.7 36 31-66 2-42 (217)
9 d2csua1 c.2.1.8 (A:1-129) Acet 20.5 21 0.0015 22.2 1.6 42 57-99 27-70 (129)
10 d1go4a_ d.135.1.1 (A:) The spi 18.1 22 0.0016 23.6 1.4 18 52-69 15-32 (196)
No 1
>d1kyqa2 e.37.1.1 (A:151-273) Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.98 E-value=3.8 Score=26.36 Aligned_cols=27 Identities=26% Similarity=0.240 Sum_probs=23.8
Q ss_pred CCchHHHHHHHhHhcccccccCCCCCC
Q psy151 49 EMTDRLSRLASHLLQQQCYYPLIPPNV 75 (110)
Q Consensus 49 ~~~drl~Rl~~hll~QrsfYPl~P~~~ 75 (110)
.+.|++.++.++++.+.+++|-|||..
T Consensus 89 ~d~~~~~~l~~~~~~~~~~~~~~pp~~ 115 (123)
T d1kyqa2 89 IDVKRLLDLFKVMFQEQNCSLQFPPRE 115 (123)
T ss_dssp BCHHHHHHHHHHHHTTTTSCCCCCCHH
T ss_pred CCHHHHHHHHHHHHHhcccCCCCCChh
Confidence 346899999999999999999999854
No 2
>d1nvma1 a.5.7.1 (A:291-341) 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain {Pseudomonas sp. [TaxId: 306]}
Probab=45.76 E-value=5.6 Score=22.09 Aligned_cols=36 Identities=22% Similarity=0.450 Sum_probs=28.9
Q ss_pred EEeechHHHHHHhHHHhhcCCCCchHHHHHHHhHhccc
Q psy151 28 VGVTSVDVLMHLGREEFAAAPEMTDRLSRLASHLLQQQ 65 (110)
Q Consensus 28 igvts~Dil~~L~~~ei~~~~~~~drl~Rl~~hll~Qr 65 (110)
.||..-|||.++++.....+. +|-+-.++-.|..+|
T Consensus 15 ygv~~rdil~ElGrR~~VgGQ--EDmIiDvA~~l~~~~ 50 (51)
T d1nvma1 15 YNLKTLDILVELGHRRMVGGQ--EDMIVDVALDLLAAH 50 (51)
T ss_dssp HTCCHHHHHHHHHHHTCCTTC--THHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHhhcccccch--HHHHHHHHHHHHHhc
Confidence 588899999999998776555 489988888776654
No 3
>d1m6ya1 a.60.13.1 (A:115-215) Putative methyltransferase TM0872, insert domain {Thermotoga maritima [TaxId: 2336]}
Probab=42.95 E-value=5.5 Score=24.50 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=29.2
Q ss_pred EeechHHHHHHhHHHhhc---CCCCchH-HHHHHHhHhccc
Q psy151 29 GVTSVDVLMHLGREEFAA---APEMTDR-LSRLASHLLQQQ 65 (110)
Q Consensus 29 gvts~Dil~~L~~~ei~~---~~~~~dr-l~Rl~~hll~Qr 65 (110)
|+|..|+|...+.+|+.+ .-+...+ -.++++.|++.|
T Consensus 21 ~~sA~~~ln~~~~~~L~~Il~~yGee~~~a~~ia~~Iv~~R 61 (101)
T d1m6ya1 21 EVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR 61 (101)
T ss_dssp SCCHHHHHHHSCHHHHHHHHHHTTCCTTTHHHHHHHHHHTC
T ss_pred CcCHHHHHhhhhHHHHHHHHHHhccchhhhHHHHHHHHHhc
Confidence 689999999999999864 2232345 488999999998
No 4
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=38.32 E-value=7 Score=24.12 Aligned_cols=48 Identities=15% Similarity=0.395 Sum_probs=27.7
Q ss_pred chHHHHHHHhHhccccc--ccCCCCCCCccCChhhHHhhcCCCCCCcEEEc
Q psy151 51 TDRLSRLASHLLQQQCY--YPLIPPNVELPVDMECWELHAQLPVTPHIMIL 99 (110)
Q Consensus 51 ~drl~Rl~~hll~Qrsf--YPl~P~~~~~~lD~~~~~~~~~~~~~PDilI~ 99 (110)
.+|..+..-+-|.+..| ||+.|-.+++ .....+.....++..||+.++
T Consensus 13 ~~k~g~~v~~~L~~~g~~V~pVnP~~~~i-~G~~~y~sl~~lp~~~D~vvi 62 (116)
T d1y81a1 13 PAKYGNIILKDLLSKGFEVLPVNPNYDEI-EGLKCYRSVRELPKDVDVIVF 62 (116)
T ss_dssp TTSHHHHHHHHHHHTTCEEEEECTTCSEE-TTEECBSSGGGSCTTCCEEEE
T ss_pred CCCcHHHHHHHHHHCCCEEEEEccccccc-cCccccccchhccccceEEEE
Confidence 35666554444444444 7777765433 333333444667888998776
No 5
>d1pjqa3 e.37.1.1 (A:114-215) Siroheme synthase CysG, domains 2 and 3 {Salmonella typhimurium [TaxId: 90371]}
Probab=37.43 E-value=11 Score=22.79 Aligned_cols=28 Identities=39% Similarity=0.500 Sum_probs=20.0
Q ss_pred CcEEEECCeEEEeech---HHHHHHhHHHhh
Q psy151 18 PWVLDISGVVVGVTSV---DVLMHLGREEFA 45 (110)
Q Consensus 18 P~~~~iN~~~igvts~---Dil~~L~~~ei~ 45 (110)
|+++.-++++|||||. -+|...-++++.
T Consensus 1 PAiv~rg~l~iAISTgG~sP~lar~lR~~lE 31 (102)
T d1pjqa3 1 PSIIDRSPLMVAVSSGGTSPVLARLLREKLE 31 (102)
T ss_dssp CEEEEETTEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCeeecCCeEEEEeCCCcChHHHHHHHHHHH
Confidence 8999999999999985 444444444443
No 6
>d1wg8a1 a.60.13.1 (A:109-206) Putative methyltransferase TM0872, insert domain {Thermus thermophilus [TaxId: 274]}
Probab=30.18 E-value=4.1 Score=25.15 Aligned_cols=42 Identities=21% Similarity=0.237 Sum_probs=33.3
Q ss_pred EeechHHHHHHhHHHhhcC---CCCchHHHHHHHhHhcccccccC
Q psy151 29 GVTSVDVLMHLGREEFAAA---PEMTDRLSRLASHLLQQQCYYPL 70 (110)
Q Consensus 29 gvts~Dil~~L~~~ei~~~---~~~~drl~Rl~~hll~QrsfYPl 70 (110)
|.|..|+|...+.+|+.+- -+....-.++++.|+..|.--|+
T Consensus 19 ~~tA~~iln~~~~~eL~~if~~yGee~~a~~iA~~Iv~~R~~~~i 63 (98)
T d1wg8a1 19 GPTAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVAAREKAPI 63 (98)
T ss_dssp SCCHHHHHHHSCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcc
Confidence 6799999999999998642 23345678899999999987765
No 7
>d1v97a2 d.15.4.2 (A:3-92) Xanthine oxidase, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.76 E-value=21 Score=21.35 Aligned_cols=19 Identities=21% Similarity=0.193 Sum_probs=15.1
Q ss_pred CCCcEEEECCeEEEeechH
Q psy151 16 PRPWVLDISGVVVGVTSVD 34 (110)
Q Consensus 16 ~NP~~~~iN~~~igvts~D 34 (110)
+|+-+|.+||..+-+...|
T Consensus 1 ~~~i~F~lNG~~~~~~~~~ 19 (90)
T d1v97a2 1 ADELVFFVNGKKVVEKNAD 19 (90)
T ss_dssp CCCEEEEETTEEEEETTCC
T ss_pred CCeEEEEECCEEEEEccCC
Confidence 5889999999887766554
No 8
>d1pu6a_ a.96.1.5 (A:) 3-Methyladenine DNA glycosylase III (MagIII) {Helicobacter pylori [TaxId: 210]}
Probab=23.06 E-value=26 Score=23.68 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=29.2
Q ss_pred echHHHHHHhHHHhhcC-CC----CchHHHHHHHhHhcccc
Q psy151 31 TSVDVLMHLGREEFAAA-PE----MTDRLSRLASHLLQQQC 66 (110)
Q Consensus 31 ts~Dil~~L~~~ei~~~-~~----~~drl~Rl~~hll~Qrs 66 (110)
.+.+++..|.+.++.+. |. +.+.++-+.+-||.||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~P~~W~~~~~pfe~lv~aIL~Qqt 42 (217)
T d1pu6a_ 2 DSFEILKALKSLDLLKNAPAWWWPNALKFEALLGAVLTQNT 42 (217)
T ss_dssp CHHHHHHHHHTTTTTTTSCTTSSTTTTSHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHhcCC
Confidence 35679999999888753 32 46899999999999997
No 9
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=20.46 E-value=21 Score=22.16 Aligned_cols=42 Identities=14% Similarity=0.274 Sum_probs=23.2
Q ss_pred HHHhHhc--ccccccCCCCCCCccCChhhHHhhcCCCCCCcEEEc
Q psy151 57 LASHLLQ--QQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMIL 99 (110)
Q Consensus 57 l~~hll~--QrsfYPl~P~~~~~~lD~~~~~~~~~~~~~PDilI~ 99 (110)
+.+.|.. |..-||+.|..+++ .....+.....++..||+.++
T Consensus 27 v~~~L~~~~~g~v~pVnP~~~~i-~G~~~y~sl~dlp~~vDlvvi 70 (129)
T d2csua1 27 VFKNLKEYKKGKVYPVNIKEEEV-QGVKAYKSVKDIPDEIDLAII 70 (129)
T ss_dssp HHHHHTTCCSSEEEEECSSCSEE-TTEECBSSTTSCSSCCSEEEE
T ss_pred HHHHHHHcCCCcEEEeccCcccc-CCeEeecchhhcCCCCceEEE
Confidence 4445433 33556777764432 233333444667788898776
No 10
>d1go4a_ d.135.1.1 (A:) The spindle assembly checkpoint protein mad2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.09 E-value=22 Score=23.64 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=15.6
Q ss_pred hHHHHHHHhHhccccccc
Q psy151 52 DRLSRLASHLLQQQCYYP 69 (110)
Q Consensus 52 drl~Rl~~hll~QrsfYP 69 (110)
+-+.-..++|+.||..||
T Consensus 15 e~l~~ai~~ILY~RgiyP 32 (196)
T d1go4a_ 15 EFFSFGINSILYQRGIYP 32 (196)
T ss_dssp HHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHccCCC
Confidence 557778899999999998
Done!