Your job contains 1 sequence.
>psy151
MSSLNKLLSEDSDSKPRPWVLDISGVVVGVTSVDVLMHLGREEFAAAPEMTDRLSRLASH
LLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVKAL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy151
(110 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|H0YDR7 - symbol:POLA2 "DNA polymerase alpha sub... 217 7.5e-18 1
UNIPROTKB|B4DNB4 - symbol:POLA2 "cDNA FLJ60312, highly si... 215 2.5e-17 1
UNIPROTKB|F1RQV4 - symbol:POLA2 "Uncharacterized protein"... 216 8.7e-17 1
UNIPROTKB|Q14181 - symbol:POLA2 "DNA polymerase alpha sub... 215 1.1e-16 1
UNIPROTKB|F6XEE7 - symbol:POLA2 "Uncharacterized protein"... 213 1.8e-16 1
UNIPROTKB|F1MXS4 - symbol:POLA2 "DNA polymerase alpha sub... 213 1.8e-16 1
UNIPROTKB|F1MLC0 - symbol:POLA2 "DNA polymerase alpha sub... 213 1.9e-16 1
UNIPROTKB|Q58D13 - symbol:POLA2 "DNA polymerase alpha sub... 213 1.9e-16 1
RGD|621817 - symbol:Pola2 "polymerase (DNA directed), alp... 205 1.3e-15 1
UNIPROTKB|G3V8U6 - symbol:Pola2 "Polymerase (DNA directed... 205 1.3e-15 1
MGI|MGI:99690 - symbol:Pola2 "polymerase (DNA directed), ... 203 2.2e-15 1
UNIPROTKB|E2R2N0 - symbol:POLA2 "Uncharacterized protein"... 202 2.8e-15 1
ZFIN|ZDB-GENE-030131-778 - symbol:pola2 "polymerase (DNA ... 177 1.4e-12 1
TAIR|locus:2008580 - symbol:POLA2 "DNA polymerase alpha 2... 173 4.0e-12 1
POMBASE|SPCC553.09c - symbol:spb70 "DNA polymerase alpha ... 140 1.2e-08 1
FB|FBgn0005696 - symbol:DNApol-alpha73 "DNA polymerase al... 132 9.8e-08 1
WB|WBGene00001002 - symbol:div-1 species:6239 "Caenorhabd... 112 1.3e-05 1
CGD|CAL0004305 - symbol:orf19.2796 species:5476 "Candida ... 70 3.3e-05 3
>UNIPROTKB|H0YDR7 [details] [associations]
symbol:POLA2 "DNA polymerase alpha subunit B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] InterPro:IPR007185 Pfam:PF04042
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 HGNC:HGNC:30073
ChiTaRS:POLA2 EMBL:AP000944 Ensembl:ENST00000525924 Uniprot:H0YDR7
Length = 261
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 129 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 188
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVKAL 110
+D E + ++AQLPVTP ++I+PS+LRYFVK L
Sbjct: 189 AIDYESFYVYAQLPVTPDVLIIPSELRYFVKFL 221
>UNIPROTKB|B4DNB4 [details] [associations]
symbol:POLA2 "cDNA FLJ60312, highly similar to DNA
polymerase subunit alpha B" species:9606 "Homo sapiens" [GO:0003677
"DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR007185 Pfam:PF04042 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 InterPro:IPR016722
InterPro:IPR013627 Pfam:PF08418 PIRSF:PIRSF018300 UniGene:Hs.201897
HGNC:HGNC:30073 ChiTaRS:POLA2 EMBL:AP000944 EMBL:AK297842
IPI:IPI00908664 SMR:B4DNB4 STRING:B4DNB4 Ensembl:ENST00000541089
UCSC:uc010rod.1 Uniprot:B4DNB4
Length = 361
Score = 215 (80.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/91 (43%), Positives = 57/91 (62%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 251 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 310
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 311 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 341
>UNIPROTKB|F1RQV4 [details] [associations]
symbol:POLA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0000060 "protein
import into nucleus, translocation" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR007185 Pfam:PF04042
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0000060
GO:GO:0003887 InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GeneTree:ENSGT00390000016784 GO:GO:0005658
OMA:QVGGTFG EMBL:CU856029 Ensembl:ENSSSCT00000014207 Uniprot:F1RQV4
Length = 598
Score = 216 (81.1 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 39/93 (41%), Positives = 55/93 (59%)
Query: 16 PRPWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L + L H+G EE +++ +DR SR+ H+L Q+ YYPL PP
Sbjct: 458 PEPCTLSVNGMIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQE 517
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ +D E + HAQLPVTP + + PS+LRYFVK
Sbjct: 518 DVAIDYEHFYAHAQLPVTPDVFVAPSELRYFVK 550
>UNIPROTKB|Q14181 [details] [associations]
symbol:POLA2 "DNA polymerase alpha subunit B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005658 "alpha DNA polymerase:primase complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0032201 "telomere maintenance via semi-conservative
replication" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell
cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006270 "DNA replication
initiation" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR007185 Pfam:PF04042 GO:GO:0005737 Reactome:REACT_115566
GO:GO:0005654 Reactome:REACT_21300 GO:GO:0003677 GO:GO:0000082
GO:GO:0006270 GO:GO:0000060 GO:GO:0000216 GO:GO:0000084
GO:GO:0000722 Reactome:REACT_383 GO:GO:0006271 GO:GO:0003887
DrugBank:DB00851 GO:GO:0032201 CTD:23649 eggNOG:COG5214
HOGENOM:HOG000007382 KO:K02321 InterPro:IPR016722
InterPro:IPR013627 Pfam:PF08418 PIRSF:PIRSF018300 GO:GO:0005658
EMBL:L24559 EMBL:CR456737 EMBL:BC002990 EMBL:BC001347
IPI:IPI00290272 PIR:S39621 RefSeq:NP_002680.2 UniGene:Hs.201897
PDB:2KEB PDB:4E2I PDBsum:2KEB PDBsum:4E2I ProteinModelPortal:Q14181
SMR:Q14181 IntAct:Q14181 MINT:MINT-1382407 STRING:Q14181
PhosphoSite:Q14181 DMDM:90110415 PaxDb:Q14181 PeptideAtlas:Q14181
PRIDE:Q14181 DNASU:23649 Ensembl:ENST00000265465 GeneID:23649
KEGG:hsa:23649 UCSC:uc001odj.3 GeneCards:GC11P065029
HGNC:HGNC:30073 HPA:HPA037570 neXtProt:NX_Q14181 PharmGKB:PA411
HOVERGEN:HBG055628 InParanoid:Q14181 OMA:QVGGTFG OrthoDB:EOG4933HH
PhylomeDB:Q14181 ChiTaRS:POLA2 EvolutionaryTrace:Q14181
GenomeRNAi:23649 NextBio:46481 ArrayExpress:Q14181 Bgee:Q14181
CleanEx:HS_POLA2 Genevestigator:Q14181 GermOnline:ENSG00000014138
Uniprot:Q14181
Length = 598
Score = 215 (80.7 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 40/91 (43%), Positives = 57/91 (62%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I L HLG EE +++ +DR SR+ H+L Q+ YYPL PP ++
Sbjct: 459 PCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLPVTP ++I+PS+LRYFVK
Sbjct: 519 AIDYESFYVYAQLPVTPDVLIIPSELRYFVK 549
>UNIPROTKB|F6XEE7 [details] [associations]
symbol:POLA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR007185
Pfam:PF04042 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 CTD:23649
KO:K02321 InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GeneTree:ENSGT00390000016784 OMA:QVGGTFG
EMBL:AAEX03011641 Ensembl:ENSCAFT00000021706 RefSeq:XP_533234.2
GeneID:476025 KEGG:cfa:476025 Uniprot:F6XEE7
Length = 595
Score = 213 (80.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 40/91 (43%), Positives = 57/91 (62%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I L H+G EE ++A +DRLSR+ H+L Q+ YYPL PP ++
Sbjct: 455 PCNLSINGVIFGLTSTDLLFHMGAEEISSASGTSDRLSRILKHILTQRSYYPLYPPQEDM 514
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + ++AQLP+TP I I+PS+L+YFVK
Sbjct: 515 AIDYENFYIYAQLPITPDIFIIPSELKYFVK 545
>UNIPROTKB|F1MXS4 [details] [associations]
symbol:POLA2 "DNA polymerase alpha subunit B" species:9913
"Bos taurus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR007185
Pfam:PF04042 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
UniGene:Bt.37506 InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GeneTree:ENSGT00390000016784 EMBL:DAAA02063561
IPI:IPI00841939 Ensembl:ENSBTAT00000045520 ArrayExpress:F1MXS4
Uniprot:F1MXS4
Length = 600
Score = 213 (80.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 45/109 (41%), Positives = 61/109 (55%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILR 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP + I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVK 551
>UNIPROTKB|F1MLC0 [details] [associations]
symbol:POLA2 "DNA polymerase alpha subunit B" species:9913
"Bos taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0000060 "protein
import into nucleus, translocation" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR007185 Pfam:PF04042
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0000060
GO:GO:0003887 InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GeneTree:ENSGT00390000016784 GO:GO:0005658
OMA:QVGGTFG EMBL:DAAA02063561 IPI:IPI01017580
Ensembl:ENSBTAT00000015221 ArrayExpress:F1MLC0 Uniprot:F1MLC0
Length = 604
Score = 213 (80.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 45/109 (41%), Positives = 61/109 (55%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILR 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP + I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVK 551
>UNIPROTKB|Q58D13 [details] [associations]
symbol:POLA2 "DNA polymerase alpha subunit B" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR007185 Pfam:PF04042 GO:GO:0005634 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 EMBL:BT021784 IPI:IPI00686582
RefSeq:NP_001019713.2 UniGene:Bt.37506 STRING:Q58D13 GeneID:514793
KEGG:bta:514793 CTD:23649 eggNOG:COG5214 HOGENOM:HOG000007382
InParanoid:Q58D13 KO:K02321 BindingDB:Q58D13 ChEMBL:CHEMBL5259
NextBio:20871515 InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 Uniprot:Q58D13
Length = 604
Score = 213 (80.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 45/109 (41%), Positives = 61/109 (55%)
Query: 3 SLNKLLSEDSDSK---PRPWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLAS 59
S + LL ED P L I L H+G EE +++ +DR SR+
Sbjct: 443 SCSDLLREDKKRVRLVSEPCTLSINGVIFGLTSTDLLFHMGAEEISSSSGTSDRFSRILR 502
Query: 60 HLLQQQCYYPLIPPNVELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
H+L Q+ YYPL PP ++ +D E + L+AQLPVTP + I PS+LRYFVK
Sbjct: 503 HILTQRSYYPLYPPQEDMAIDYENFYLYAQLPVTPDVFIAPSELRYFVK 551
>RGD|621817 [details] [associations]
symbol:Pola2 "polymerase (DNA directed), alpha 2, accessory
subunit" species:10116 "Rattus norvegicus" [GO:0000060 "protein
import into nucleus, translocation" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IMP] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IC;ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006260 "DNA replication" evidence=ISO;IMP;TAS] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR007185 Pfam:PF04042
RGD:621817 GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0000060
GO:GO:0003887 eggNOG:COG5214 HOGENOM:HOG000007382
InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GO:GO:0005658 HOVERGEN:HBG055628
OrthoDB:EOG4933HH EMBL:AJ245648 EMBL:AJ011606 IPI:IPI00214475
UniGene:Rn.205002 STRING:O89043 PRIDE:O89043 UCSC:RGD:621817
InParanoid:O89043 Genevestigator:O89043
GermOnline:ENSRNOG00000020906 Uniprot:O89043
Length = 600
Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCNLSINGVMFGLTSTDLLFHIGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>UNIPROTKB|G3V8U6 [details] [associations]
symbol:Pola2 "Polymerase (DNA directed), alpha 2, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0000060 "protein
import into nucleus, translocation" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR007185
Pfam:PF04042 RGD:621817 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887
InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GeneTree:ENSGT00390000016784 OMA:QVGGTFG
UniGene:Rn.205002 EMBL:CH473953 Ensembl:ENSRNOT00000028406
Uniprot:G3V8U6
Length = 600
Score = 205 (77.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCNLSINGVMFGLTSTDLLFHIGAEEICSSSGTSDRFSRILKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>MGI|MGI:99690 [details] [associations]
symbol:Pola2 "polymerase (DNA directed), alpha 2"
species:10090 "Mus musculus" [GO:0000060 "protein import into
nucleus, translocation" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006260 "DNA
replication" evidence=ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR007185
Pfam:PF04042 MGI:MGI:99690 GO:GO:0005737 GO:GO:0003677
GO:GO:0006260 GO:GO:0000060 EMBL:CH466612 GO:GO:0003887 CTD:23649
eggNOG:COG5214 HOGENOM:HOG000007382 KO:K02321 InterPro:IPR016722
InterPro:IPR013627 Pfam:PF08418 PIRSF:PIRSF018300
GeneTree:ENSGT00390000016784 GO:GO:0005658 HOVERGEN:HBG055628
OMA:QVGGTFG OrthoDB:EOG4933HH EMBL:D13546 EMBL:AK150099
EMBL:BC021424 EMBL:BC064795 IPI:IPI00331177 PIR:B46642
RefSeq:NP_032919.2 UniGene:Mm.209931 ProteinModelPortal:P33611
SMR:P33611 IntAct:P33611 STRING:P33611 PhosphoSite:P33611
PaxDb:P33611 PRIDE:P33611 Ensembl:ENSMUST00000025752 GeneID:18969
KEGG:mmu:18969 InParanoid:Q8VDR3 BindingDB:P33611 ChEMBL:CHEMBL3005
NextBio:295312 Bgee:P33611 CleanEx:MM_POLA2 Genevestigator:P33611
GermOnline:ENSMUSG00000024833 Uniprot:P33611
Length = 600
Score = 203 (76.5 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 39/91 (42%), Positives = 55/91 (60%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNVEL 77
P L I L H+G EE ++ +DR SR+ H+L Q+ YYPL PP+ ++
Sbjct: 459 PCSLSINGVMFGLTSTDLLFHIGAEEIFSSSGTSDRFSRVLKHILTQRSYYPLYPPHEDM 518
Query: 78 PVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+D E + +AQLPVTP + I+PS+LRYFVK
Sbjct: 519 AIDYENFYTYAQLPVTPDVFIVPSELRYFVK 549
>UNIPROTKB|E2R2N0 [details] [associations]
symbol:POLA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0000060 "protein
import into nucleus, translocation" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR007185 Pfam:PF04042
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0000060
GO:GO:0003887 InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GO:GO:0005658 Ensembl:ENSCAFT00000021706
Uniprot:E2R2N0
Length = 597
Score = 202 (76.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEFAA--APEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P L I L H+G EE ++ A +DRLSR+ H+L Q+ YYPL PP
Sbjct: 455 PCNLSINGVIFGLTSTDLLFHMGAEEISSPSASGTSDRLSRILKHILTQRSYYPLYPPQE 514
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ +D E + ++AQLP+TP I I+PS+L+YFVK
Sbjct: 515 DMAIDYENFYIYAQLPITPDIFIIPSELKYFVK 547
>ZFIN|ZDB-GENE-030131-778 [details] [associations]
symbol:pola2 "polymerase (DNA directed), alpha 2"
species:7955 "Danio rerio" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR007185
Pfam:PF04042 ZFIN:ZDB-GENE-030131-778 GO:GO:0003677 GO:GO:0006260
GO:GO:0003887 InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 HOVERGEN:HBG055628 EMBL:BC065460 IPI:IPI00505805
UniGene:Dr.77094 STRING:Q6P0S9 PRIDE:Q6P0S9 InParanoid:Q6P0S9
ArrayExpress:Q6P0S9 Bgee:Q6P0S9 Uniprot:Q6P0S9
Length = 600
Score = 177 (67.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 35/93 (37%), Positives = 54/93 (58%)
Query: 16 PRPWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P P L I L H+G EE ++ T+R SR+ H+L Q+ YYPL PP
Sbjct: 459 PDPCTLLIGNVTFGLTSTDILFHMGAEEISSGTG-TERFSRIMKHMLTQRSYYPLYPPAE 517
Query: 76 ELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
E+ +D + ++ +Q+ +TP I++ PS+LRYF+K
Sbjct: 518 EVNMDYDKFQQFSQMSLTPDILLAPSELRYFIK 550
>TAIR|locus:2008580 [details] [associations]
symbol:POLA2 "DNA polymerase alpha 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006260
"DNA replication" evidence=IEA;RCA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016458 "gene silencing" evidence=RCA] [GO:0034968 "histone
lysine methylation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR007185 Pfam:PF04042 EMBL:CP002684
GO:GO:0005739 GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 KO:K02321
InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 IPI:IPI00519085 RefSeq:NP_176930.2
UniGene:At.35625 ProteinModelPortal:F4HTP2 SMR:F4HTP2 PRIDE:F4HTP2
EnsemblPlants:AT1G67630.1 GeneID:843086 KEGG:ath:AT1G67630
OMA:GCRFMYD Uniprot:F4HTP2
Length = 620
Score = 173 (66.0 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 38/77 (49%), Positives = 47/77 (61%)
Query: 36 LMHLGREEFAAAPE--MTDRLSRLASHLLQQQCYYPLIPPNVELPVDMECWELHAQLPVT 93
L L EE + P TDR+SRLASHLL+Q+ +YPL PP LP D Q+
Sbjct: 497 LKQLSGEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSI 556
Query: 94 PHIMILPSDLRYFVKAL 110
P I++LPSD+RYFVK L
Sbjct: 557 PDILLLPSDMRYFVKIL 573
>POMBASE|SPCC553.09c [details] [associations]
symbol:spb70 "DNA polymerase alpha B-subunit"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006269 "DNA
replication, synthesis of RNA primer" evidence=IC] [GO:0006270 "DNA
replication initiation" evidence=NAS] InterPro:IPR007185
Pfam:PF04042 PomBase:SPCC553.09c GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003677 GO:GO:0000790 GO:GO:0006270
GO:GO:0003887 GO:GO:0006269 eggNOG:COG5214 KO:K02321
InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 GO:GO:0005658 PIR:T41395 RefSeq:NP_587765.1
IntAct:O74946 STRING:O74946 EnsemblFungi:SPCC553.09c.1
GeneID:2539135 KEGG:spo:SPCC553.09c OMA:FFPGQIV OrthoDB:EOG4HDX2Z
NextBio:20800307 Uniprot:O74946
Length = 574
Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/98 (37%), Positives = 50/98 (51%)
Query: 16 PRPWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P + I L+H REE P + +RL SH+L Q+ +YPL P +
Sbjct: 421 PNPCMFSINDVVFGVSTNDILLHTSREELFRLPSHGNLFARLVSHVLHQRHFYPLFPGGS 480
Query: 75 VEL--P--VDMECWELHAQLPVTPHIMILPSDLRYFVK 108
+E P +D+ +L L P I+ILPSDLRYFVK
Sbjct: 481 LEKCNPSNLDIAHLKLGEFLNTMPDILILPSDLRYFVK 518
>FB|FBgn0005696 [details] [associations]
symbol:DNApol-alpha73 "DNA polymerase alpha 73kD"
species:7227 "Drosophila melanogaster" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=ISS] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR007185 Pfam:PF04042 EMBL:AE014297 GO:GO:0005635
GO:GO:0003677 GO:GO:0006270 GO:GO:0003887 eggNOG:COG5214 KO:K02321
InterPro:IPR016722 PIRSF:PIRSF018300 GeneTree:ENSGT00390000016784
EMBL:AY060943 PIR:S40962 RefSeq:NP_733206.3
ProteinModelPortal:Q9VB62 SMR:Q9VB62 IntAct:Q9VB62 MINT:MINT-282285
STRING:Q9VB62 PaxDb:Q9VB62 EnsemblMetazoa:FBtr0114543 GeneID:43278
KEGG:dme:Dmel_CG5923 CTD:43278 FlyBase:FBgn0005696
InParanoid:Q9VB62 OMA:EQWMAFS OrthoDB:EOG470RZS PhylomeDB:Q9VB62
GenomeRNAi:43278 NextBio:833113 Bgee:Q9VB62 GermOnline:CG5923
GO:GO:0005658 Uniprot:Q9VB62
Length = 609
Score = 132 (51.5 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 16 PRPWVLDIXXXXXXXXXXXXLMHLGREEFAAAPEMTDRLSRLASHLLQQQCYYPLIPP-N 74
P P ++D+ + HL EFA +R+ R +HL Q +YPL PP +
Sbjct: 470 PDPSLVDLDGFTLGVTSTDVVDHLLSHEFAV--NAGERMHRAINHLFHQGSFYPLYPPAD 527
Query: 75 VELPVDMECWELHAQLPVTPHIMILPSDLRYFVK 108
++ D + +AQL P+++ILPSD R+F++
Sbjct: 528 EDMAYDSQLALKYAQLKQLPNVLILPSDQRHFIR 561
>WB|WBGene00001002 [details] [associations]
symbol:div-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] InterPro:IPR007185 Pfam:PF04042 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0002119
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 EMBL:Z31590
eggNOG:COG5214 KO:K02321 InterPro:IPR016722 InterPro:IPR013627
Pfam:PF08418 PIRSF:PIRSF018300 EMBL:AL032660 PIR:T27359
RefSeq:NP_499268.1 ProteinModelPortal:Q21625 SMR:Q21625
IntAct:Q21625 STRING:Q21625 PaxDb:Q21625 EnsemblMetazoa:R01H10.1
GeneID:176439 KEGG:cel:CELE_R01H10.1 UCSC:R01H10.1 CTD:176439
WormBase:R01H10.1 GeneTree:ENSGT00390000016784 HOGENOM:HOG000015821
InParanoid:Q21625 OMA:KGPTGNY NextBio:892584 Uniprot:Q21625
Length = 581
Score = 112 (44.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 18 PWVLDIXXXXXXXXXXXXLMHLGREEF--AAAPEMTDRLSRLASHLLQQQCYYPLIPPNV 75
P + I + L EF +A E DR++RL+SHLL QQC YPL P
Sbjct: 441 PCIFRISGVEVAMTSSEPIQALSNTEFHRSANQENIDRVARLSSHLLTQQCMYPLEP--T 498
Query: 76 ELPVDM-ECWELHAQLPVTPHIMILPSDL 103
E+P M + ++ + TPHI+ P+ L
Sbjct: 499 EVPASMGDLLDVCC-IGSTPHIVFAPTKL 526
>CGD|CAL0004305 [details] [associations]
symbol:orf19.2796 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0016233 "telomere capping" evidence=IEA]
[GO:0006270 "DNA replication initiation" evidence=IEA]
InterPro:IPR007185 Pfam:PF04042 CGD:CAL0004305 GO:GO:0003677
GO:GO:0006260 GO:GO:0003887 eggNOG:COG5214 KO:K02321
InterPro:IPR016722 InterPro:IPR013627 Pfam:PF08418
PIRSF:PIRSF018300 EMBL:AACQ01000185 RefSeq:XP_711738.1
STRING:Q59PU7 GeneID:3646666 KEGG:cal:CaO19.2796 Uniprot:Q59PU7
Length = 664
Score = 70 (29.7 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 52 DRLSRLASHLLQQQCYYPLIPPNVELPVDMECWEL 86
+R R+ H+ +Q+ YYP+ P +++ +C +L
Sbjct: 514 NRFERIVKHIFEQRRYYPIFPGSIKTEPKQKCTDL 548
Score = 58 (25.5 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 94 PHIMILPSDLRYFVKAL 110
P ++ILPS+L+YF K +
Sbjct: 582 PDVLILPSELKYFAKVI 598
Score = 34 (17.0 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 11 DSD-SKPRPWVLD 22
DSD S+P+P LD
Sbjct: 409 DSDQSQPQPKTLD 421
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 110 98 0.00091 102 3 11 22 0.37 30
29 0.45 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 558 (59 KB)
Total size of DFA: 122 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.77u 0.08s 9.85t Elapsed: 00:00:07
Total cpu time: 9.77u 0.08s 9.85t Elapsed: 00:00:07
Start: Thu Aug 15 11:18:43 2013 End: Thu Aug 15 11:18:50 2013