Query psy1510
Match_columns 216
No_of_seqs 177 out of 1515
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 20:37:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1510.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1510hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223|consensus 100.0 1.5E-47 3.3E-52 316.5 18.4 183 14-199 42-228 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 7.8E-44 1.7E-48 304.1 20.4 187 14-201 85-277 (296)
3 KOG0224|consensus 100.0 4.1E-44 8.9E-49 298.8 12.0 188 14-201 64-279 (316)
4 PLN00182 putative aquaporin NI 100.0 1.9E-42 4.2E-47 293.9 21.1 180 15-198 74-255 (283)
5 COG0580 GlpF Glycerol uptake f 100.0 1.3E-42 2.8E-47 286.4 18.6 183 14-197 39-240 (241)
6 PF00230 MIP: Major intrinsic 100.0 7.2E-43 1.6E-47 289.7 16.5 179 14-192 45-227 (227)
7 PRK05420 aquaporin Z; Provisio 100.0 8.6E-42 1.9E-46 283.5 20.8 182 15-199 35-230 (231)
8 PLN00026 aquaporin NIP; Provi 100.0 4.7E-42 1E-46 292.7 18.7 182 14-200 102-285 (298)
9 PTZ00016 aquaglyceroporin; Pro 100.0 9.8E-42 2.1E-46 291.7 20.1 187 14-200 81-293 (294)
10 PLN00027 aquaporin TIP; Provis 100.0 2E-41 4.4E-46 284.6 21.1 183 14-199 56-241 (252)
11 PLN00166 aquaporin TIP2; Provi 100.0 4.4E-41 9.6E-46 281.9 21.5 182 14-198 54-238 (250)
12 PLN00167 aquaporin TIP5; Provi 100.0 5.1E-41 1.1E-45 282.2 21.0 184 14-200 58-243 (256)
13 PLN00183 putative aquaporin NI 100.0 3.3E-39 7.1E-44 273.2 19.6 182 15-201 77-260 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.8E-39 6E-44 268.6 18.7 182 14-195 32-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 1.1E-38 2.4E-43 263.0 18.8 178 15-192 33-216 (216)
16 PLN00026 aquaporin NIP; Provi 99.7 2.4E-17 5.2E-22 141.1 9.2 107 93-199 63-174 (298)
17 PLN00184 aquaporin NIP1; Provi 99.7 4.9E-17 1.1E-21 139.4 8.9 101 98-198 51-156 (296)
18 PLN00183 putative aquaporin NI 99.7 2.6E-16 5.7E-21 133.6 8.9 110 89-198 33-147 (274)
19 PLN00167 aquaporin TIP5; Provi 99.6 1.4E-15 3E-20 128.2 9.2 103 96-198 17-129 (256)
20 PLN00182 putative aquaporin NI 99.6 8.6E-16 1.9E-20 130.9 7.8 102 97-198 38-144 (283)
21 PLN00166 aquaporin TIP2; Provi 99.6 1.4E-15 3.1E-20 127.7 8.7 101 98-198 15-125 (250)
22 PTZ00016 aquaglyceroporin; Pro 99.6 3.3E-15 7.2E-20 128.2 8.2 100 99-198 48-152 (294)
23 PLN00027 aquaporin TIP; Provis 99.6 5.8E-15 1.2E-19 124.3 9.1 100 99-198 18-127 (252)
24 PRK05420 aquaporin Z; Provisio 99.6 6.8E-15 1.5E-19 122.4 8.3 98 101-198 2-105 (231)
25 cd00333 MIP Major intrinsic pr 99.6 5.8E-15 1.3E-19 122.7 6.5 99 102-200 1-105 (228)
26 TIGR00861 MIP MIP family chann 99.5 4E-14 8.7E-19 116.7 7.5 95 106-200 1-105 (216)
27 COG0580 GlpF Glycerol uptake f 99.5 5.8E-14 1.3E-18 116.4 7.3 105 99-203 3-115 (241)
28 KOG0224|consensus 99.5 9.1E-14 2E-18 117.0 6.3 100 99-198 30-135 (316)
29 KOG0223|consensus 99.4 2.7E-13 5.9E-18 112.6 8.2 104 96-199 6-114 (238)
30 PF00230 MIP: Major intrinsic 99.4 5.5E-13 1.2E-17 110.6 5.7 102 98-199 5-117 (227)
31 PRK11562 nitrite transporter N 80.5 20 0.00044 30.6 9.6 156 41-203 83-256 (268)
32 PF02537 CRCB: CrcB-like prote 58.3 68 0.0015 23.2 7.2 110 67-191 5-114 (117)
33 PRK14218 camphor resistance pr 57.8 64 0.0014 24.4 7.0 117 56-195 6-126 (133)
34 PF03033 Glyco_transf_28: Glyc 56.9 4.1 8.9E-05 30.1 0.3 21 33-53 5-25 (139)
35 PF04632 FUSC: Fusaric acid re 54.5 1.9E+02 0.0042 27.3 15.6 131 34-200 361-494 (650)
36 PRK14225 camphor resistance pr 47.5 1.2E+02 0.0027 23.0 7.9 112 66-195 16-131 (137)
37 PRK14206 camphor resistance pr 45.8 1.2E+02 0.0025 22.7 6.7 110 67-194 7-120 (127)
38 KOG3030|consensus 45.2 74 0.0016 27.9 6.3 48 153-200 210-266 (317)
39 COG0306 PitA Phosphate/sulphat 41.5 2.5E+02 0.0054 24.7 10.3 24 177-200 139-162 (326)
40 COG3301 NrfD Formate-dependent 40.5 2.5E+02 0.0053 24.4 9.8 132 56-198 133-270 (305)
41 PRK12446 undecaprenyldiphospho 40.3 13 0.00029 32.7 1.0 22 31-52 6-27 (352)
42 PRK14200 camphor resistance pr 40.2 1.3E+02 0.0028 22.5 6.2 109 67-195 11-123 (127)
43 PRK14217 camphor resistance pr 38.2 1.6E+02 0.0034 22.4 6.4 109 67-195 10-122 (134)
44 PF03918 CcmH: Cytochrome C bi 37.2 11 0.00024 29.2 0.0 29 173-201 100-128 (148)
45 PRK14212 camphor resistance pr 36.6 97 0.0021 23.2 5.0 109 67-195 8-120 (128)
46 PRK14233 camphor resistance pr 35.7 1.9E+02 0.0042 21.8 6.9 108 67-192 10-121 (133)
47 PRK14219 camphor resistance pr 34.8 1.5E+02 0.0032 22.4 5.8 109 67-195 7-119 (132)
48 PRK14198 camphor resistance pr 33.8 1.8E+02 0.0039 21.6 6.1 109 67-195 7-119 (124)
49 PRK14231 camphor resistance pr 33.6 1.6E+02 0.0036 22.0 5.9 107 67-196 7-117 (129)
50 PRK14227 camphor resistance pr 32.9 1.6E+02 0.0035 21.8 5.7 109 67-195 8-120 (124)
51 PF03092 BT1: BT1 family; Int 32.1 1.3E+02 0.0028 27.2 6.0 41 169-210 386-426 (433)
52 PRK10478 putative PTS system f 31.2 1.4E+02 0.003 26.7 5.8 24 174-197 313-336 (359)
53 PRK14195 camphor resistance pr 29.8 1.7E+02 0.0036 21.8 5.3 109 67-195 8-120 (125)
54 PF01034 Syndecan: Syndecan do 29.7 22 0.00047 23.5 0.4 33 179-211 16-48 (64)
55 COG2116 FocA Formate/nitrite f 28.5 3.8E+02 0.0081 22.9 14.1 156 41-201 89-262 (265)
56 PF14990 DUF4516: Domain of un 27.5 1.6E+02 0.0034 18.2 4.2 34 52-85 3-36 (47)
57 PRK14221 camphor resistance pr 27.3 2.3E+02 0.005 21.0 5.7 103 66-190 11-117 (124)
58 TIGR00788 fbt folate/biopterin 27.3 4.1E+02 0.009 24.1 8.5 30 168-198 418-447 (468)
59 PRK14222 camphor resistance pr 27.2 2.6E+02 0.0057 20.7 6.1 109 67-195 8-120 (124)
60 PF14034 Spore_YtrH: Sporulati 27.1 2E+02 0.0043 20.9 5.0 47 37-83 53-101 (102)
61 PF06592 DUF1138: Protein of u 26.4 92 0.002 21.0 3.0 25 177-201 3-27 (73)
62 COG3448 CBS-domain-containing 26.4 4.5E+02 0.0098 23.2 11.1 69 53-121 22-102 (382)
63 PRK14210 camphor resistance pr 25.1 2.2E+02 0.0047 21.2 5.3 112 66-195 7-122 (127)
64 TIGR02587 putative integral me 24.3 4.6E+02 0.0099 22.5 8.2 60 53-115 96-155 (271)
65 PF09622 DUF2391: Putative int 24.2 4.3E+02 0.0093 22.6 7.4 63 54-116 93-156 (267)
66 PF09163 Form-deh_trans: Forma 23.9 1.2E+02 0.0026 18.4 2.9 22 180-201 18-39 (44)
67 PRK14199 camphor resistance pr 23.4 3.2E+02 0.0069 20.4 7.1 114 59-193 4-121 (128)
68 PRK12446 undecaprenyldiphospho 22.5 23 0.0005 31.1 -0.6 20 149-168 8-27 (352)
69 PRK14213 camphor resistance pr 21.8 1.9E+02 0.0041 21.3 4.3 28 54-81 90-117 (118)
70 PRK10805 formate transporter; 21.7 5.2E+02 0.011 22.2 14.2 80 41-121 93-182 (285)
71 PRK14203 camphor resistance pr 21.3 3.6E+02 0.0078 20.2 8.3 110 67-195 12-126 (132)
72 PRK09713 focB putative formate 21.2 5.3E+02 0.011 22.1 12.3 73 49-121 99-181 (282)
73 PRK11427 multidrug efflux syst 20.3 8.2E+02 0.018 24.0 14.7 29 54-82 393-421 (683)
No 1
>KOG0223|consensus
Probab=100.00 E-value=1.5e-47 Score=316.45 Aligned_cols=183 Identities=48% Similarity=0.836 Sum_probs=172.6
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC-cCCCce
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPAD-FQGNLG 90 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~-~~~~~~ 90 (216)
.+.+.++++||++++ +++++++||||+|||||+++++.|++++.++..|+++|++|+++|+.+.+.+.+++ ..+..+
T Consensus 42 ~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~ 121 (238)
T KOG0223|consen 42 VGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKISLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLG 121 (238)
T ss_pred chhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCcHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcc
Confidence 679999999999999 99999999999999999999999999999999999999999999999999999984 344667
Q ss_pred eecCCCCCchhhhHHHHHHHHHHHHHHHHh-hccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc
Q psy1510 91 LTTLNKHLTPVQGMGIEFFLGFVLVLVIFG-VCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN 169 (216)
Q Consensus 91 ~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~-~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 169 (216)
.+.+.++.+..|+++.|++.||.|+++++. .+|+++. .+.|+.+|+.+...+++.+++||++|||||+|||++..+
T Consensus 122 ~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~---~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~ 198 (238)
T KOG0223|consen 122 LTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS---ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG 198 (238)
T ss_pred eeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc---ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc
Confidence 778888999999999999999999999998 6666664 689999999999999999999999999999999999999
Q ss_pred CcCceeehhhhhHHHHHHHHHHHHHHhcCC
Q psy1510 170 IWTDHWVYWAGPSLGGLVAGLLYTYLFVAP 199 (216)
Q Consensus 170 ~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 199 (216)
.|+++|+||+||++|+++++++|+.++.++
T Consensus 199 ~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 199 SWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred CCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 999999999999999999999999999886
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=7.8e-44 Score=304.10 Aligned_cols=187 Identities=32% Similarity=0.509 Sum_probs=162.8
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcC---CC
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQ---GN 88 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~---~~ 88 (216)
.++..++++||+.++ +++++++||||+|||||+++++.|+++|.+.+.|+++|++||++|+++++.+++.... ..
T Consensus 85 ~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~ 164 (296)
T PLN00184 85 VTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGK 164 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccc
Confidence 367889999999988 8999999999999999999999999999999999999999999999999998864321 11
Q ss_pred c-eeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHh
Q psy1510 89 L-GLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVV 167 (216)
Q Consensus 89 ~-~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 167 (216)
. ......+..+.+++++.|+++||+|+++++.+.++++. .....|+.+|+.+.+.+++.+++||++|||||||||+++
T Consensus 165 ~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~-~~~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~ 243 (296)
T PLN00184 165 HDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRA-IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMV 243 (296)
T ss_pred cceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcC-CCcchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHH
Confidence 1 11112234578999999999999999999987654432 345789999999999999999999999999999999999
Q ss_pred hcCcCceeehhhhhHHHHHHHHHHHHHHhcCCCC
Q psy1510 168 ANIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSI 201 (216)
Q Consensus 168 ~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~ 201 (216)
.+.|+++|+||+||++|+++++++|++++..+++
T Consensus 244 ~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~ 277 (296)
T PLN00184 244 YGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKP 277 (296)
T ss_pred hhcccccchHHhHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999876665
No 3
>KOG0224|consensus
Probab=100.00 E-value=4.1e-44 Score=298.80 Aligned_cols=188 Identities=27% Similarity=0.410 Sum_probs=172.1
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCc------
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADF------ 85 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~------ 85 (216)
+++..+.++||++++ +++.+++||||+|||||+++++.||++|+|+++|+++|++||++|++.+|.++.+..
T Consensus 64 g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg 143 (316)
T KOG0224|consen 64 GSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGG 143 (316)
T ss_pred CceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 688889999999999 999999999999999999999999999999999999999999999999999987753
Q ss_pred ---------CCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCcc
Q psy1510 86 ---------QGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASM 156 (216)
Q Consensus 86 ---------~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~l 156 (216)
+....++.|.+.++.+++|+.|+++|.+|+.++++++|++++....+.|+.+|+.+.++.++.+..+|..+
T Consensus 144 ~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l~aI~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~Gyai 223 (316)
T KOG0224|consen 144 NRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCLFAITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAI 223 (316)
T ss_pred ceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhheeEEecCCCCCCcchhHHHHHHHHHHHHHHhhcccCccc
Confidence 12344678889999999999999999999999999999999877889999999999999999999999999
Q ss_pred ChhhcHhHhHhhc--C---------cCceeehhhhhHHHHHHHHHHHHHHhcCCCC
Q psy1510 157 NPARTFGSAVVAN--I---------WTDHWVYWAGPSLGGLVAGLLYTYLFVAPSI 201 (216)
Q Consensus 157 NPA~~l~~~~~~~--~---------~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~ 201 (216)
||||||+||++.. . -.+.|+.|++|++|+++++++|.+++..+.+
T Consensus 224 NPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~G~~iY~~~Ig~h~~ 279 (316)
T KOG0224|consen 224 NPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAILGGWIYDFFIGFHIP 279 (316)
T ss_pred CcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhhhhhhheeeeeccCC
Confidence 9999999999941 1 1467899999999999999999999987665
No 4
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=1.9e-42 Score=293.86 Aligned_cols=180 Identities=31% Similarity=0.508 Sum_probs=158.4
Q ss_pred CchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCceee
Q psy1510 15 TVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLT 92 (216)
Q Consensus 15 ~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~ 92 (216)
+...++++||+.++ +++++++||||+|||||+++++.|+++|.+.+.|+++|++|+++|+++++.+++.... +.+
T Consensus 74 ~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~---~~~ 150 (283)
T PLN00182 74 TFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPE---AFF 150 (283)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cee
Confidence 57788899999988 8999999999999999999999999999999999999999999999999998864321 122
Q ss_pred cCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcCcC
Q psy1510 93 TLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWT 172 (216)
Q Consensus 93 ~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~ 172 (216)
...++.+.+++++.|+++|++|+++++...++++. .....++.+|+.+.+.+++.+++||+++||||+|+++++.+.|.
T Consensus 151 ~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~-~~~~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~ 229 (283)
T PLN00182 151 GTTPTDSSGQALVAEIIISFLLMFVISGVATDSRA-VGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYK 229 (283)
T ss_pred eCCCCcchHHHHHHHHHHHHHHHHHHHhheecccc-CCcchhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhcccc
Confidence 22345578899999999999999999987544432 23468999999999999999999999999999999999998999
Q ss_pred ceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 173 DHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 173 ~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
++|+||++|++|+++++++|+++..+
T Consensus 230 ~~wvY~vap~lGA~lgally~~l~~~ 255 (283)
T PLN00182 230 GIWVYIVGPFVGIIAGGFVYNLIRFT 255 (283)
T ss_pred ceeHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999854
No 5
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-42 Score=286.43 Aligned_cols=183 Identities=33% Similarity=0.471 Sum_probs=161.2
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCC----
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQG---- 87 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~---- 87 (216)
.++..++++||+.++ +|+++++||||+|||||+++++.||++|++++.||++|++||++|+.++|.++++...+
T Consensus 39 ~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~ 118 (241)
T COG0580 39 GGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGD 118 (241)
T ss_pred cceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCC
Confidence 688889999999999 99999999999999999999999999999999999999999999999999998875411
Q ss_pred ---CceeecCCCC-CchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHh
Q psy1510 88 ---NLGLTTLNKH-LTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFG 163 (216)
Q Consensus 88 ---~~~~~~~~~~-~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~ 163 (216)
..+..++.|+ .+..++++.|+++||+|++.++..+++++. +....|+.+|+.+...+++.++.||..+|||||+|
T Consensus 119 ~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~-~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlG 197 (241)
T COG0580 119 PLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA-NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLG 197 (241)
T ss_pred chhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc-cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHH
Confidence 2333333343 378899999999999999999998865554 44599999999999999999999999999999999
Q ss_pred HhHhhc---------CcCceeehhhhhHHHHHHHHHHHHHHhc
Q psy1510 164 SAVVAN---------IWTDHWVYWAGPSLGGLVAGLLYTYLFV 197 (216)
Q Consensus 164 ~~~~~~---------~~~~~~vy~~~p~~Ga~~a~~l~~~~~~ 197 (216)
|++... ++.|.|+||++|++|+++++++|+.++.
T Consensus 198 prl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 198 PRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred HHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 999642 2358999999999999999999998765
No 6
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=7.2e-43 Score=289.66 Aligned_cols=179 Identities=42% Similarity=0.667 Sum_probs=162.2
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC-cCCCce
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPAD-FQGNLG 90 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~-~~~~~~ 90 (216)
+++..+++++|+.+. +++++++||+|+||+||+++++.|++++++++.|+++|++|+++|+.+++.++++. ......
T Consensus 45 ~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~ 124 (227)
T PF00230_consen 45 GGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIF 124 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTT
T ss_pred ccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeeeeeecccceeeEEeeccccccccccchhhcccCcccccccc
Confidence 367889999999987 99999999999999999999999999999999999999999999999999999885 233445
Q ss_pred eecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCC-CChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc
Q psy1510 91 LTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHA-KAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN 169 (216)
Q Consensus 91 ~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~-~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 169 (216)
.+.+.++.+..++++.|+++|++|+++++...|++++.. +.+.|+.+|+.+....+..++.||++|||||+|+++++..
T Consensus 125 ~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~ 204 (227)
T PF00230_consen 125 ATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRKFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG 204 (227)
T ss_dssp SCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT
T ss_pred cccccccchhhhhhhhhhhhhhHHHhhhhhhcccccccccccccceeEEEEEeecccccccccccccCchhhcCceeecc
Confidence 666778889999999999999999999999988887644 4578999999999999999999999999999999999999
Q ss_pred CcCceeehhhhhHHHHHHHHHHH
Q psy1510 170 IWTDHWVYWAGPSLGGLVAGLLY 192 (216)
Q Consensus 170 ~~~~~~vy~~~p~~Ga~~a~~l~ 192 (216)
.|+++|+||++|++|+++|+++|
T Consensus 205 ~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 205 IWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp HHTTTTHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEehHHHHHHHHHhhC
Confidence 99999999999999999999987
No 7
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=8.6e-42 Score=283.51 Aligned_cols=182 Identities=34% Similarity=0.603 Sum_probs=158.5
Q ss_pred CchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCC-----
Q psy1510 15 TVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQG----- 87 (216)
Q Consensus 15 ~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~----- 87 (216)
+...++++||+.++ +++++++||+|+|||||++.++.|+++|++.+.|+++|++|+++|+.+++.+++++...
T Consensus 35 ~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~ 114 (231)
T PRK05420 35 GFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGS 114 (231)
T ss_pred chHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccc
Confidence 57788999999998 89999999999999999999999999999999999999999999999999887653210
Q ss_pred Cc-----eeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcH
Q psy1510 88 NL-----GLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTF 162 (216)
Q Consensus 88 ~~-----~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l 162 (216)
.. ....| ...+..++++.|+++|++|+++++...|+++. ....|+.+|+.+...++..+++||++|||||||
T Consensus 115 ~~~~~~~~~~~~-~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~--~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~ 191 (231)
T PRK05420 115 GFASNGYGEHSP-GGYSLLAALVCEVVLTAFFLLVILGATDKRAP--AGFAPIAIGLALTLIHLISIPVTNTSVNPARST 191 (231)
T ss_pred cccccccccCCC-CcccHHHHHHHHHHHHHHHHHHHHHHhCCCCC--CcchHHHHHHHHHHHHHHhhccCCCccCcHHHH
Confidence 01 01122 23478899999999999999999998886543 447899999999999999999999999999999
Q ss_pred hHhHhhcCc--CceeehhhhhHHHHHHHHHHHHHHhcCC
Q psy1510 163 GSAVVANIW--TDHWVYWAGPSLGGLVAGLLYTYLFVAP 199 (216)
Q Consensus 163 ~~~~~~~~~--~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 199 (216)
+|+++.++| +++|+||++|++|+++++++|+++++++
T Consensus 192 gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 192 GVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred HHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 999998766 5899999999999999999999987754
No 8
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=4.7e-42 Score=292.71 Aligned_cols=182 Identities=31% Similarity=0.502 Sum_probs=160.3
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCcee
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGL 91 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~ 91 (216)
.++..++++||++++ +++++++||||+|||||++.++.|+++|.+.+.|+++|++|+++|+++++.++++.... +.
T Consensus 102 ~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~--g~ 179 (298)
T PLN00026 102 ETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAAQVSASICASFALKGVFHPFMSG--GV 179 (298)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--ce
Confidence 367788999999998 89999999999999999999999999999999999999999999999999998764322 23
Q ss_pred ecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcCc
Q psy1510 92 TTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIW 171 (216)
Q Consensus 92 ~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~ 171 (216)
+. ++.+..++++.|+++||+|+++++.+.++++. .+...++.+|+.+.+.+++.++.||++|||||+|+|+++.++|
T Consensus 180 t~--p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~-~~~~~~l~iGl~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~ 256 (298)
T PLN00026 180 TV--PSVSTGQAFALEFIITFNLLFVVTAVATDTRA-VGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVAAGNY 256 (298)
T ss_pred ee--ecccHHHHHHHHHHHHHHHHHhheeeecCCCC-cCCccchHHHHHHHHHHHHhcccCccccChHHHHHHHHhcCCc
Confidence 33 35688999999999999999999876544332 2346789999999999999999999999999999999999999
Q ss_pred CceeehhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510 172 TDHWVYWAGPSLGGLVAGLLYTYLFVAPS 200 (216)
Q Consensus 172 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~ 200 (216)
+++|+||+||++|+++++++|+.+..+++
T Consensus 257 ~~~wVy~vaPilGAilga~ly~~~~~~~~ 285 (298)
T PLN00026 257 RAIWIYLVAPTLGALAGAGTYTAVKLREE 285 (298)
T ss_pred hheeHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999865544
No 9
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=9.8e-42 Score=291.75 Aligned_cols=187 Identities=28% Similarity=0.379 Sum_probs=162.6
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcC-----
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQ----- 86 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~----- 86 (216)
.+...++++||++++ +++++++||+|+|||||+++++.|+++|++.+.|+++|++||++|++++|.++++...
T Consensus 81 ~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~ 160 (294)
T PTZ00016 81 GDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIP 160 (294)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCc
Confidence 467789999999988 8999999999999999999999999999999999999999999999999999876321
Q ss_pred ---------CCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccC
Q psy1510 87 ---------GNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMN 157 (216)
Q Consensus 87 ---------~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lN 157 (216)
...+...+.++.+..++++.|+++||+|+++++.++|+++.......|+.+|+.+.+.+++.++.||++||
T Consensus 161 ~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smN 240 (294)
T PTZ00016 161 ELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALN 240 (294)
T ss_pred ccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhccCccCCCcCcccHHHHHHHHHHHHhccCCCCCccc
Confidence 11122233456778999999999999999999999887765444578999999999999999999999999
Q ss_pred hhhcHhHhHhh------cCcC----ceeehhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510 158 PARTFGSAVVA------NIWT----DHWVYWAGPSLGGLVAGLLYTYLFVAPS 200 (216)
Q Consensus 158 PA~~l~~~~~~------~~~~----~~~vy~~~p~~Ga~~a~~l~~~~~~~~~ 200 (216)
|||||||+++. ..|+ ++|+||+||++|+++|+++|+++++++.
T Consensus 241 PAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~~ll~~~~ 293 (294)
T PTZ00016 241 PARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYDKFIPPLI 293 (294)
T ss_pred chhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999996 2454 6899999999999999999999987754
No 10
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=2e-41 Score=284.64 Aligned_cols=183 Identities=36% Similarity=0.646 Sum_probs=161.5
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCcee
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGL 91 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~ 91 (216)
.+++.++++||+.++ +++++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+.+.+.++.. .+.
T Consensus 56 ~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~---~~~ 132 (252)
T PLN00027 56 AGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLLLKFSTGGLE---TSA 132 (252)
T ss_pred cchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---ccc
Confidence 467789999999988 899999999999999999999999999999999999999999999999988765532 233
Q ss_pred ecCCCCCchhhhHHHHHHHHHHHHHHHHhhc-cCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcC
Q psy1510 92 TTLNKHLTPVQGMGIEFFLGFVLVLVIFGVC-DGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANI 170 (216)
Q Consensus 92 ~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~-~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~ 170 (216)
..+.++.+..++++.|+++||+|+++++... |+++.......|+.+|+.+...+++.+++||++|||||+|+|+++.++
T Consensus 133 ~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~ 212 (252)
T PLN00027 133 FSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWT 212 (252)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhhc
Confidence 3345677899999999999999999999764 444333345789999999999999999999999999999999999999
Q ss_pred cCceeehhhhhHHHHHHHHHHHHHHhcCC
Q psy1510 171 WTDHWVYWAGPSLGGLVAGLLYTYLFVAP 199 (216)
Q Consensus 171 ~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 199 (216)
|+++|+||+||++|+++++++|++++.+.
T Consensus 213 ~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 241 (252)
T PLN00027 213 WTNHWVYWAGPLIGGGIAGLVYELIFIGS 241 (252)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998653
No 11
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=4.4e-41 Score=281.86 Aligned_cols=182 Identities=35% Similarity=0.677 Sum_probs=160.4
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCcee
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGL 91 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~ 91 (216)
.+++.++++||+.++ +++++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+.+.+++++... .
T Consensus 54 ~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~---~ 130 (250)
T PLN00166 54 AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITIITGFFYWIAQCLGSIVACLLLVFVTNGESVP---T 130 (250)
T ss_pred CccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCc---c
Confidence 367789999999998 99999999999999999999999999999999999999999999999999887653211 1
Q ss_pred ecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCC-CCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcC
Q psy1510 92 TTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKP-HAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANI 170 (216)
Q Consensus 92 ~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~-~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~ 170 (216)
....++.+..++++.|+++||+|+++++...+++++ ......|+.+|+.+...++..+++||++|||||+|+|+++.++
T Consensus 131 ~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~ 210 (250)
T PLN00166 131 HGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD 210 (250)
T ss_pred cccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCC
Confidence 123345678999999999999999999987655443 2345789999999999999999999999999999999999999
Q ss_pred cCceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 171 WTDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 171 ~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
|+++|+||++|++|+++++++|+.++.+
T Consensus 211 ~~~~wvywvgPi~Ga~~aa~~y~~l~~~ 238 (250)
T PLN00166 211 FSQIWIYWVGPLVGGALAGLIYGDVFIG 238 (250)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999988754
No 12
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=5.1e-41 Score=282.22 Aligned_cols=184 Identities=36% Similarity=0.565 Sum_probs=162.3
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCcee
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGL 91 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~ 91 (216)
.+++.++++||+.++ +++++++||+|+|||+|++.++.|+++|++.+.|+++|++|+++|+.+.+.++++.. ...
T Consensus 58 ~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~---~~~ 134 (256)
T PLN00167 58 SSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGHISVPTAMFYWISQMLASVMACLFLKVTTVGQH---VPT 134 (256)
T ss_pred CcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcccc---ccc
Confidence 468899999999999 999999999999999999999999999999999999999999999999998866532 111
Q ss_pred ecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcCc
Q psy1510 92 TTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIW 171 (216)
Q Consensus 92 ~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~ 171 (216)
....++.+..++++.|+++|++|+++++..+|+++...+...|+.+|+.+.+..+..+++||+.|||||+|+|+++.+.|
T Consensus 135 ~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~ 214 (256)
T PLN00167 135 YKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAIGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSF 214 (256)
T ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCcchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCc
Confidence 22223456788999999999999999999887765444457899999999999999999999999999999999999899
Q ss_pred CceeehhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510 172 TDHWVYWAGPSLGGLVAGLLYTYLFVAPS 200 (216)
Q Consensus 172 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~ 200 (216)
+++|+||+||++|+++++++|++++.++.
T Consensus 215 ~~~wvywvgP~~Ga~l~a~~y~~l~~~~~ 243 (256)
T PLN00167 215 KNQAVYWVGPLLGGAVAGLLYDNVVFPTQ 243 (256)
T ss_pred cCcEEEeHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999986543
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=3.3e-39 Score=273.18 Aligned_cols=182 Identities=23% Similarity=0.437 Sum_probs=159.9
Q ss_pred CchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCceee
Q psy1510 15 TVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLT 92 (216)
Q Consensus 15 ~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~ 92 (216)
++..++++||+.+. +++++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+.+.+++... ....
T Consensus 77 ~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~--~~~~- 153 (274)
T PLN00183 77 GLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGVKA--DLMT- 153 (274)
T ss_pred chHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--cccc-
Confidence 56678899999988 899999999999999999999999999999999999999999999999998887532 2222
Q ss_pred cCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcCcC
Q psy1510 93 TLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWT 172 (216)
Q Consensus 93 ~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~ 172 (216)
..+..+.+++++.|+++|++|+++++...++++. .....++.+|+.+.+.+++.+++||++|||||+|++++.+.+|+
T Consensus 154 -~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~-~~~~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~ 231 (274)
T PLN00183 154 -TKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQS-LGHLSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFK 231 (274)
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHhhheeeccccC-CCCceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChh
Confidence 2344567899999999999999999988766533 23467899999999999999999999999999999999998999
Q ss_pred ceeehhhhhHHHHHHHHHHHHHHhcCCCC
Q psy1510 173 DHWVYWAGPSLGGLVAGLLYTYLFVAPSI 201 (216)
Q Consensus 173 ~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~ 201 (216)
++|+||++|++|+++++++|+.++.+...
T Consensus 232 ~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 232 DIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred heehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999876543
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.8e-39 Score=268.56 Aligned_cols=182 Identities=38% Similarity=0.640 Sum_probs=160.7
Q ss_pred CCchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCC---
Q psy1510 14 TTVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGN--- 88 (216)
Q Consensus 14 ~~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~--- 88 (216)
.++..++++||+.+. +++++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+.+.+++++..+.
T Consensus 32 ~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~ 111 (228)
T cd00333 32 GGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGA 111 (228)
T ss_pred CcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCc
Confidence 456788999999988 899999999999999999999999999999999999999999999999999987753211
Q ss_pred ------ceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCC-CCCChhHHHHHHHHHHHHHHhhcCccCccChhhc
Q psy1510 89 ------LGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKP-HAKAPAALAIGLTVALGHLAAVDFTGASMNPART 161 (216)
Q Consensus 89 ------~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~-~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~ 161 (216)
...+.|.++.+..++++.|+++|++|++.++...++++. ......++.+|+.+.+.++..+++||+++||||+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~ 191 (228)
T cd00333 112 NNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARS 191 (228)
T ss_pred cccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhc
Confidence 112345667789999999999999999999998876553 3455789999999999999999999999999999
Q ss_pred HhHhHhhcC---cCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 162 FGSAVVANI---WTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 162 l~~~~~~~~---~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+++++.++. |+++|+||++|++|+++++++|+++
T Consensus 192 ~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 192 LGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred hHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 999999875 9999999999999999999999863
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=1.1e-38 Score=262.96 Aligned_cols=178 Identities=40% Similarity=0.648 Sum_probs=156.5
Q ss_pred CchHHHHHHHHHHH--HHHhhcccccccchHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCce-e
Q psy1510 15 TVLYPYLTRGLSIY--FQALGHVSGGHFNPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLG-L 91 (216)
Q Consensus 15 ~~~~ia~~~G~~v~--i~~~~~iSGah~NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~-~ 91 (216)
++..++++||+.+. +++++++||+|+|||+|++.++.|+++|.+.+.|+++|++|+++|+.+.+.++++....... .
T Consensus 33 ~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~ 112 (216)
T TIGR00861 33 QFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVN 112 (216)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccCCcccc
Confidence 57789999999998 89999999999999999999999999999999999999999999999999998875422211 1
Q ss_pred ecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCC-CCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-
Q psy1510 92 TTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPH-AKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN- 169 (216)
Q Consensus 92 ~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~- 169 (216)
..+.++.+..++++.|+++|++|+++++...+++++. .....++.+|+.+...++..+++||+++||||+++++++++
T Consensus 113 ~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~ 192 (216)
T TIGR00861 113 GSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGL 192 (216)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcc
Confidence 2233456889999999999999999999887765442 23378999999999999999999999999999999999987
Q ss_pred -CcCceeehhhhhHHHHHHHHHHH
Q psy1510 170 -IWTDHWVYWAGPSLGGLVAGLLY 192 (216)
Q Consensus 170 -~~~~~~vy~~~p~~Ga~~a~~l~ 192 (216)
+|+++|+||++|++|+++++++|
T Consensus 193 ~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 193 AGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred ccccceeHHHHHHHHHHHHHHHhC
Confidence 89999999999999999998875
No 16
>PLN00026 aquaporin NIP; Provisional
Probab=99.72 E-value=2.4e-17 Score=141.07 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=88.6
Q ss_pred cCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCC--CCCCCh--hHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhh
Q psy1510 93 TLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNK--PHAKAP--AALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVA 168 (216)
Q Consensus 93 ~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~--~~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~ 168 (216)
.+.++.+.+|.++.|+++||+|+++++.....++ ...... .++.+|+++++.+++.+++||+|+||||++++++.+
T Consensus 63 ~~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g 142 (298)
T PLN00026 63 LPPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALR 142 (298)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhC
Confidence 3455667889999999999999999986432211 111122 357889999999999999999999999999999987
Q ss_pred c-CcCceeehhhhhHHHHHHHHHHHHHHhcCC
Q psy1510 169 N-IWTDHWVYWAGPSLGGLVAGLLYTYLFVAP 199 (216)
Q Consensus 169 ~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 199 (216)
+ .|.+.|+||++|++|+++|+++++.++++.
T Consensus 143 ~~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~ 174 (298)
T PLN00026 143 HFPWKHVPAYIAAQVSASICASFALKGVFHPF 174 (298)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7 899999999999999999999999988653
No 17
>PLN00184 aquaporin NIP1; Provisional
Probab=99.70 E-value=4.9e-17 Score=139.35 Aligned_cols=101 Identities=21% Similarity=0.179 Sum_probs=84.5
Q ss_pred CchhhhHHHHHHHHHHHHHHHHhhccCCCC--CCCChh--HHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-CcC
Q psy1510 98 LTPVQGMGIEFFLGFVLVLVIFGVCDGNKP--HAKAPA--ALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-IWT 172 (216)
Q Consensus 98 ~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~--~~~~~~--~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 172 (216)
.+..+.++.|+++||+|+++++.....+.. ...... ++..|+.+++.+++.+++||+|+||||++++++.++ .|.
T Consensus 51 ~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~ 130 (296)
T PLN00184 51 VPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLK 130 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHH
Confidence 356789999999999999999876432221 112233 445599999999999999999999999999999887 899
Q ss_pred ceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 173 DHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 173 ~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
+.|+||++|++|+++|+++++.++..
T Consensus 131 ~~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 131 QVPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998864
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.66 E-value=2.6e-16 Score=133.57 Aligned_cols=110 Identities=20% Similarity=0.330 Sum_probs=92.2
Q ss_pred ceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCC--CCCh--hHHHHHHHHHHHHHHhhcCccCccChhhcHhH
Q psy1510 89 LGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPH--AKAP--AALAIGLTVALGHLAAVDFTGASMNPARTFGS 164 (216)
Q Consensus 89 ~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~--~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~ 164 (216)
+++-+..-+.+.++.++.|+++||+++++++...+.++.. .... .++.+|+.+.+.+++.+++||+|+||||++++
T Consensus 33 ~~~~~~~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~ 112 (274)
T PLN00183 33 FGCLPYDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAF 112 (274)
T ss_pred ccccCCcCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHH
Confidence 4455555567788999999999999999998776543321 1122 46688999999999999999999999999999
Q ss_pred hHhhc-CcCceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 165 AVVAN-IWTDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 165 ~~~~~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
++.++ .|...|+||++|++|+++|+.+++.+++.
T Consensus 113 ~l~g~i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~ 147 (274)
T PLN00183 113 ATFGHFPWSKVPLYITAQTVGSVLATYVGVSVYGV 147 (274)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99987 89999999999999999999999888865
No 19
>PLN00167 aquaporin TIP5; Provisional
Probab=99.62 E-value=1.4e-15 Score=128.21 Aligned_cols=103 Identities=23% Similarity=0.352 Sum_probs=87.0
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHhhccCCC---CC------CCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhH
Q psy1510 96 KHLTPVQGMGIEFFLGFVLVLVIFGVCDGNK---PH------AKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAV 166 (216)
Q Consensus 96 ~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~---~~------~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~ 166 (216)
...+.++.++.|+++||+|+++.+.....++ ++ .....++.+|+.+.+.+++.+++||+|+|||+++++.+
T Consensus 17 ~~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~ 96 (256)
T PLN00167 17 VTRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAV 96 (256)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHH
Confidence 3446788999999999999999887654321 11 12247899999999999999999999999999999999
Q ss_pred hhc-CcCceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 167 VAN-IWTDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 167 ~~~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
.++ .|...|+||++|++|+++++.+++.+++.
T Consensus 97 ~g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 97 GGHISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred hCCCcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 876 79999999999999999999998887654
No 20
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.62 E-value=8.6e-16 Score=130.92 Aligned_cols=102 Identities=22% Similarity=0.237 Sum_probs=84.8
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHhhccCCCC--CCCCh--hHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-Cc
Q psy1510 97 HLTPVQGMGIEFFLGFVLVLVIFGVCDGNKP--HAKAP--AALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-IW 171 (216)
Q Consensus 97 ~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~--~~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~ 171 (216)
..+.+|.+++|+++||+|+++.+......+. ..... ..+..|+.+.+.+++.+++||+|+|||+++++++.++ +|
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~ 117 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW 117 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence 3456789999999999999998875432221 11122 3457899999999999999999999999999999988 89
Q ss_pred CceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 172 TDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 172 ~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
.+.|+||++|++|+++|+++.+.+++.
T Consensus 118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~~ 144 (283)
T PLN00182 118 YQVPLYIGAQLTGSLLASLTLRLMFNV 144 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999888853
No 21
>PLN00166 aquaporin TIP2; Provisional
Probab=99.62 E-value=1.4e-15 Score=127.73 Aligned_cols=101 Identities=24% Similarity=0.403 Sum_probs=84.6
Q ss_pred CchhhhHHHHHHHHHHHHHHHHhhccCC---C--C--CCCC--hhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhh
Q psy1510 98 LTPVQGMGIEFFLGFVLVLVIFGVCDGN---K--P--HAKA--PAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVA 168 (216)
Q Consensus 98 ~s~~~~~~~E~~~T~~l~~~v~~~~~~~---~--~--~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~ 168 (216)
.+.+|.++.|+++||+|+++.+...... . + .... ..++.+|+.+.+.+++.+++||+|+||||++++++.+
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 4677899999999999999988764321 1 1 0112 3567789999999999999999999999999999986
Q ss_pred c-CcCceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 169 N-IWTDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 169 ~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
+ +|.+.|+||++|++|+++++.+++.++..
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 5 78999999999999999999999988754
No 22
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.59 E-value=3.3e-15 Score=128.24 Aligned_cols=100 Identities=27% Similarity=0.398 Sum_probs=84.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHhhccCCCC----CCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-CcCc
Q psy1510 99 TPVQGMGIEFFLGFVLVLVIFGVCDGNKP----HAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-IWTD 173 (216)
Q Consensus 99 s~~~~~~~E~~~T~~l~~~v~~~~~~~~~----~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~ 173 (216)
+..+.+++|+++||+++++.++....... ......++..|+.+.+.+++.+++||+|+|||+++++++.++ +|..
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 45688999999999999988876543221 111235677899999999999999999999999999999988 8999
Q ss_pred eeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 174 HWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 174 ~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
.|+||++|++|+++|+++.+.++++
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998888765
No 23
>PLN00027 aquaporin TIP; Provisional
Probab=99.58 E-value=5.8e-15 Score=124.35 Aligned_cols=100 Identities=25% Similarity=0.359 Sum_probs=82.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHhhcc------CCCC-CCCC--hhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc
Q psy1510 99 TPVQGMGIEFFLGFVLVLVIFGVCD------GNKP-HAKA--PAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN 169 (216)
Q Consensus 99 s~~~~~~~E~~~T~~l~~~v~~~~~------~~~~-~~~~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~ 169 (216)
..++.++.|+++||+|+++.+.... .+++ .... ..++.+|+.+.+.+++.+++||+|+||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4678899999999999999886531 1111 1112 46889999999999999999999999999999998766
Q ss_pred -CcCceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 170 -IWTDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 170 -~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
.|...|+||++|++|+++++++++.+.+.
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 127 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTGG 127 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 78899999999999999999999887654
No 24
>PRK05420 aquaporin Z; Provisional
Probab=99.57 E-value=6.8e-15 Score=122.40 Aligned_cols=98 Identities=26% Similarity=0.257 Sum_probs=80.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhccC--CCCC-CCCh--hHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-CcCce
Q psy1510 101 VQGMGIEFFLGFVLVLVIFGVCDG--NKPH-AKAP--AALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-IWTDH 174 (216)
Q Consensus 101 ~~~~~~E~~~T~~l~~~v~~~~~~--~~~~-~~~~--~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~ 174 (216)
.|.++.|+++|++|+++.+..... +.++ .... .++..|+.+.+.+++.+++||+|+|||+++++.+.+. +|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 578999999999999987764321 1111 1122 3788899999999999999999999999999999976 89999
Q ss_pred eehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 175 WVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 175 ~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
|+||++|++|+++|+.+.+.+++.
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999877777654
No 25
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.55 E-value=5.8e-15 Score=122.67 Aligned_cols=99 Identities=24% Similarity=0.218 Sum_probs=83.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCCC-C--CC--ChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-CcCcee
Q psy1510 102 QGMGIEFFLGFVLVLVIFGVCDGNKP-H--AK--APAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-IWTDHW 175 (216)
Q Consensus 102 ~~~~~E~~~T~~l~~~v~~~~~~~~~-~--~~--~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~~ 175 (216)
|.++.|+++||++++..+....+++. + .. ...++.+|+.+...+++.+++||+|+|||+++++.+.++ +|.+.|
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 45789999999999998876543321 1 11 245788899999999999999999999999999999987 799999
Q ss_pred ehhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510 176 VYWAGPSLGGLVAGLLYTYLFVAPS 200 (216)
Q Consensus 176 vy~~~p~~Ga~~a~~l~~~~~~~~~ 200 (216)
+||++|++|+++++.+++.+++++.
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~ 105 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLY 105 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999988887643
No 26
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.51 E-value=4e-14 Score=116.73 Aligned_cols=95 Identities=26% Similarity=0.233 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhhccC---CC--CC----CCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-CcCcee
Q psy1510 106 IEFFLGFVLVLVIFGVCDG---NK--PH----AKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-IWTDHW 175 (216)
Q Consensus 106 ~E~~~T~~l~~~v~~~~~~---~~--~~----~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~~~~ 175 (216)
.|+++|++++++.+....+ ++ +. .....++.+|+.+...+++.++.||+|+|||+++++.+.++ +|.+.|
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 4999999999998875433 11 11 11246788899999999999999999999999999999987 899999
Q ss_pred ehhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510 176 VYWAGPSLGGLVAGLLYTYLFVAPS 200 (216)
Q Consensus 176 vy~~~p~~Ga~~a~~l~~~~~~~~~ 200 (216)
+||++|++|+++++++++.++++..
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~ 105 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLF 105 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccc
Confidence 9999999999999999998887653
No 27
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.49 E-value=5.8e-14 Score=116.40 Aligned_cols=105 Identities=26% Similarity=0.299 Sum_probs=85.0
Q ss_pred chhhhHHHHHHHHHHHHHHHHhhc---c-CC--CC-CCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-C
Q psy1510 99 TPVQGMGIEFFLGFVLVLVIFGVC---D-GN--KP-HAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-I 170 (216)
Q Consensus 99 s~~~~~~~E~~~T~~l~~~v~~~~---~-~~--~~-~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~ 170 (216)
+..+.++.|+++|++|++...... . .+ .. .......+..|+.+.+.+++.+++||+|+|||++++.++.+. +
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 455678999999999999865432 1 11 11 122235778899999999999999999999999999999998 8
Q ss_pred cCceeehhhhhHHHHHHHHHHHHHHhcCCCCCC
Q psy1510 171 WTDHWVYWAGPSLGGLVAGLLYTYLFVAPSIGE 203 (216)
Q Consensus 171 ~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~~ 203 (216)
|.+...||++|++|+++++.+...++.++..+.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~ 115 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILET 115 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhh
Confidence 999999999999999999988888887765433
No 28
>KOG0224|consensus
Probab=99.46 E-value=9.1e-14 Score=117.04 Aligned_cols=100 Identities=21% Similarity=0.314 Sum_probs=82.3
Q ss_pred chhhhHHHHHHHHHHHHHHHHhhccCCC-----CCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-CcC
Q psy1510 99 TPVQGMGIEFFLGFVLVLVIFGVCDGNK-----PHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-IWT 172 (216)
Q Consensus 99 s~~~~~~~E~~~T~~l~~~v~~~~~~~~-----~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~~~ 172 (216)
...|.+++||++|++|++..+++..+.. ..+-....+..|+++++.+++++.+||+|+|||++|+..++++ .|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 4678999999999999998776543221 1222345678899999999999999999999999999999998 899
Q ss_pred ceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 173 DHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 173 ~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
++.+|.++|++||++++.....++.+
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d 135 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYD 135 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998865555544
No 29
>KOG0223|consensus
Probab=99.44 E-value=2.7e-13 Score=112.58 Aligned_cols=104 Identities=23% Similarity=0.236 Sum_probs=87.8
Q ss_pred CCCchhhhHHHHHHHHHHHHHHHHhhccCCCC---CC-CChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-C
Q psy1510 96 KHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKP---HA-KAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-I 170 (216)
Q Consensus 96 ~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~---~~-~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-~ 170 (216)
...+.+|.++.||++|+++++..+........ .. .....+..|+.+++.+++.+++||+|+|||.+++..+.++ .
T Consensus 6 ~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~is 85 (238)
T KOG0223|consen 6 LSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKIS 85 (238)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCCc
Confidence 34578899999999999999998765433331 11 1235677799999999999999999999999999999987 7
Q ss_pred cCceeehhhhhHHHHHHHHHHHHHHhcCC
Q psy1510 171 WTDHWVYWAGPSLGGLVAGLLYTYLFVAP 199 (216)
Q Consensus 171 ~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 199 (216)
+.+...||++|++|+++++.+.+.+++.+
T Consensus 86 l~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~ 114 (238)
T KOG0223|consen 86 LFRAVAYIVAQLLGAIAGAALLKVVTPGQ 114 (238)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHheecCcc
Confidence 88999999999999999999999998875
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.38 E-value=5.5e-13 Score=110.56 Aligned_cols=102 Identities=28% Similarity=0.356 Sum_probs=81.3
Q ss_pred CchhhhHHHHHHHHHHHHHHHHhhc---cCCCCC---CC--C--hhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHh
Q psy1510 98 LTPVQGMGIEFFLGFVLVLVIFGVC---DGNKPH---AK--A--PAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVV 167 (216)
Q Consensus 98 ~s~~~~~~~E~~~T~~l~~~v~~~~---~~~~~~---~~--~--~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~ 167 (216)
.+.+|.+++|+++|+++++...... .....+ .. + ...+..|+.+.+.++..++.||+|+|||.+++..+.
T Consensus 5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~ 84 (227)
T PF00230_consen 5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT 84 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence 3578999999999999998876522 122211 01 1 234456888889999999999999999999999999
Q ss_pred hc-CcCceeehhhhhHHHHHHHHHHHHHHhcCC
Q psy1510 168 AN-IWTDHWVYWAGPSLGGLVAGLLYTYLFVAP 199 (216)
Q Consensus 168 ~~-~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~ 199 (216)
++ +|.+..+|+++|++|+++|+.+.+.++++.
T Consensus 85 g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~ 117 (227)
T PF00230_consen 85 GRISWKKAIVYIIAQFLGAFLGALLVYALYPDS 117 (227)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH
T ss_pred eeecccceeeEEeeccccccccccchhhcccCc
Confidence 87 899999999999999999999988888773
No 31
>PRK11562 nitrite transporter NirC; Provisional
Probab=80.46 E-value=20 Score=30.58 Aligned_cols=156 Identities=13% Similarity=0.072 Sum_probs=72.9
Q ss_pred chHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC---cC---CCce--eecCCCCCchhhhHHHHHHHHH
Q psy1510 41 NPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPAD---FQ---GNLG--LTTLNKHLTPVQGMGIEFFLGF 112 (216)
Q Consensus 41 NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~---~~---~~~~--~~~~~~~~s~~~~~~~E~~~T~ 112 (216)
|=.....-++.||.++++.+-.+.-=++|=++|+++.-.++... .. ...- ...-..+.+..+.|+-=.++-+
T Consensus 83 n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~gI~CNw 162 (268)
T PRK11562 83 HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNW 162 (268)
T ss_pred chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 33333344567889988887666666666666666554443211 10 0000 0000112345666666667777
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc-----CcC----ceeehhhhhHH
Q psy1510 113 VLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN-----IWT----DHWVYWAGPSL 183 (216)
Q Consensus 113 ~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~-----~~~----~~~vy~~~p~~ 183 (216)
+..+.+......+ . ......+. +.+++. ...++.=+..|=- -+...+..+ .|. +.-.=.+|.++
T Consensus 163 LVclavw~~~~~~-~-~gKi~~i~--~pI~~F--v~~GFEH~IANm~-~~~l~~~~~~~~~~~~~~~~~nlipvtLGNiv 235 (268)
T PRK11562 163 LVCLAIWMAIRTE-G-AAKFIAIW--WCLLAF--IASGYEHSVANMT-LFALSWFGHHSEAYTLAGIGHNLLWVTLGNTL 235 (268)
T ss_pred HHHHHHHHHHhcc-c-cchhHHHH--HHHHHH--HHcCCcchhHhHH-HHHHHHHccCchhhhHHHHHHHHHHHHHHHHH
Confidence 7776665443222 1 11122222 222221 1222233344522 222222221 111 11223478888
Q ss_pred HH-HHHHHHHHHHhcCCCCCC
Q psy1510 184 GG-LVAGLLYTYLFVAPSIGE 203 (216)
Q Consensus 184 Ga-~~a~~l~~~~~~~~~~~~ 203 (216)
|+ ++-++.|.+.++++.+++
T Consensus 236 GG~v~vg~~y~~~~~~~~~~~ 256 (268)
T PRK11562 236 SGAVFMGLGYWYATPKANRPV 256 (268)
T ss_pred HHHHHHHHHHHHHhCCCcCch
Confidence 88 566777888887765433
No 32
>PF02537 CRCB: CrcB-like protein; InterPro: IPR003691 Three genes, crcA, cspE and crcB when present in high copy confer camphor resistance on a cell and suppress mutations in the chromosomal partition gene mukB in Escherichia coli. The cspE gene has been previously identified as a cold shock-like protein with homologues in all organisms tested []. Camphor and mukB mutations may interfere with chromosome condensation and high copy crcA, cspE and crcB have been implicated as promoting or protecting chromosome folding [].; GO: 0016020 membrane
Probab=58.34 E-value=68 Score=23.23 Aligned_cols=110 Identities=16% Similarity=0.077 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+++-+.+..... .......+..+..-.+++|++-+..-....+..... ...+..++....+
T Consensus 5 ~lgg~~Ga~~R~~l~~~~~--------~~~~~~p~gt~~vN~~g~fllG~~~~~~~~~~~~~~--~~~~~~~l~~Gf~-- 72 (117)
T PF02537_consen 5 ALGGALGALLRYGLSKLLN--------RRWGWFPWGTLLVNVLGCFLLGLLAGLLAKKLASKW--SPSLRLFLGTGFC-- 72 (117)
T ss_pred HHHHHHHHHHHHHHHHHhc--------cccCCCchHHHHHHHHHHHHHHHHHHHHHHhccccC--CHHHHHHHHHHHc--
Confidence 5788999888887643321 011112566788999999998776543322111111 1222222222211
Q ss_pred HhhcCccCccChhhcHhHhHhhcCcCceeehhhhhHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLL 191 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l 191 (216)
|..|--+ -.+.......-.++|.....|.+..++++++++.+
T Consensus 73 --G~lTTfS-t~~~e~~~l~~~~~~~~~~~y~~~s~~~g~~~~~~ 114 (117)
T PF02537_consen 73 --GGLTTFS-TFILETFQLFESGRWFRALLYVLVSVILGLLAAWL 114 (117)
T ss_pred --chHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1111000 00111111222346777888999999999988765
No 33
>PRK14218 camphor resistance protein CrcB; Provisional
Probab=57.77 E-value=64 Score=24.43 Aligned_cols=117 Identities=15% Similarity=0.092 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHH
Q psy1510 56 IIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAAL 135 (216)
Q Consensus 56 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~ 135 (216)
|++...++ .+|+.+|+.+-|.+-..-. . ...++ -++..++.-.+++|++-+..-... ++... + .++
T Consensus 6 ~~~~~l~V---~~GG~~Ga~lRy~l~~~~~-~-----~~~~~-fP~gTl~VNv~GsfllG~l~~~~~-~~~~~-~--~~~ 71 (133)
T PRK14218 6 WWQSLLLV---MLGGAFGSGLRFVIGSCLL-Q-----RFGAG-FPWGTLAVNLIGSFVAGFLLIWLD-KRGSA-G--WPW 71 (133)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHH-H-----hcCCC-CcHHHHHHHHHHHHHHHHHHHHHH-hccCC-C--HHH
Confidence 55554443 3899999998886532110 0 00111 245678999999999876643322 22111 1 112
Q ss_pred HHHHHHHHHHHHhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 136 AIGLTVALGHLAAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 136 ~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
...+.... + |.+|--+ +++.... .++|.....|.+..++++++++.+-..+
T Consensus 72 ~~~l~tGf---l-GgfTTFS-----Tf~~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 126 (133)
T PRK14218 72 RMLLIVGL---I-GGLTTFS-----SLMMECLVFVRSDRSLMVGIYLCITLLFGLLFVFLGARL 126 (133)
T ss_pred HHHHHHHH---h-chhccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222111 1 2222110 2222222 2466666789999999999998875444
No 34
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=56.87 E-value=4.1 Score=30.10 Aligned_cols=21 Identities=14% Similarity=0.215 Sum_probs=17.5
Q ss_pred hcccccccchHHHHHHHHhCC
Q psy1510 33 GHVSGGHFNPAVTVGMLATGK 53 (216)
Q Consensus 33 ~~iSGah~NPavTla~~l~g~ 53 (216)
..=|+||+||.+.++..+..+
T Consensus 5 ~~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 5 TGGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp EESSHHHHHHHHHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHHHhcc
Confidence 344789999999999999755
No 35
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=54.53 E-value=1.9e+02 Score=27.28 Aligned_cols=131 Identities=16% Similarity=0.101 Sum_probs=71.3
Q ss_pred cccccccch---HHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHH
Q psy1510 34 HVSGGHFNP---AVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFL 110 (216)
Q Consensus 34 ~iSGah~NP---avTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~ 110 (216)
.-++|+.-. +|+.+++-.-.-|......++...++|+.+|....+.++|.-. .+. .+.=.++
T Consensus 361 ~W~~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~--------------~f~-~L~l~l~ 425 (650)
T PF04632_consen 361 GWPSGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD--------------GFP-LLALVLA 425 (650)
T ss_pred CCChhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--------------cHH-HHHHHHH
Confidence 333454433 3333334445577889999999999999999999888766431 111 1111111
Q ss_pred HHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhcCcCceeehhhhhHHHHHHHHH
Q psy1510 111 GFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVANIWTDHWVYWAGPSLGGLVAGL 190 (216)
Q Consensus 111 T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~ 190 (216)
-+++.. .+... + +.......++.+....... +-.....|++.-+- =.++.++|.+++.+
T Consensus 426 ~~l~~~-~~~~~---~---p~~~~~g~~~~v~f~~~~~-~~n~~~~d~~~f~n-------------~~la~l~G~~~a~l 484 (650)
T PF04632_consen 426 PFLFLG-GLLMA---R---PRTAYIGLGFAVFFLLLLG-PGNPYSYDFATFLN-------------RALAILLGIVIAAL 484 (650)
T ss_pred HHHHHH-HHHHc---C---chHHHHHHHHHHHHHHHhc-CCCCCCCCHHHHHH-------------HHHHHHHHHHHHHH
Confidence 121111 12221 1 1234455555554443322 22334455543221 15788999999999
Q ss_pred HHHHHhcCCC
Q psy1510 191 LYTYLFVAPS 200 (216)
Q Consensus 191 l~~~~~~~~~ 200 (216)
.++.+.+...
T Consensus 485 ~~~li~p~~~ 494 (650)
T PF04632_consen 485 VFRLIRPFSP 494 (650)
T ss_pred HHHHHCCCCh
Confidence 9988877654
No 36
>PRK14225 camphor resistance protein CrcB; Provisional
Probab=47.48 E-value=1.2e+02 Score=22.97 Aligned_cols=112 Identities=13% Similarity=-0.013 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHH
Q psy1510 66 QCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGH 145 (216)
Q Consensus 66 Q~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~ 145 (216)
=.+|+.+|+.+-|.+-.. .+... ... -++..++.-.+++|++-+..-.....++... ...+...+...
T Consensus 16 V~lGG~~Ga~~Ry~l~~~-~~~~~-----~~~-fP~gTl~VNi~GsfllG~l~~~~~~~~~~~~--~~~~~~~l~tG--- 83 (137)
T PRK14225 16 VGCGAAIGALLRFLSGWV-IVAIL-----GAN-PLWGTSFVNIVGSFIIMFFATLTGPEGRWLV--SPAWRQFVMGG--- 83 (137)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHhc-----CCC-CcHHHHHHHHHHHHHHHHHHHHHHhcccccC--CHHHHHHHHHH---
Confidence 348999999888765311 10000 011 2355788999999998766433221111111 11122222211
Q ss_pred HHhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 146 LAAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 146 ~~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
++ |.+|--+ +++.... .++|.....|++..++++++++.+-..+
T Consensus 84 fl-GgfTTFS-----Tfs~E~~~L~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 131 (137)
T PRK14225 84 LC-GGLTTFS-----SMSLDTFLLVLHGNAAFALAYLCGLVFLSLSAAMLGLIA 131 (137)
T ss_pred Hh-chhccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1122110 2222222 3577777889999999999998875443
No 37
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=45.83 E-value=1.2e+02 Score=22.75 Aligned_cols=110 Identities=14% Similarity=0.012 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-.-.. ... ..+ -++..+..-.+++|++-+........++... ..++...+....
T Consensus 7 ~~Gg~lGa~~Ry~l~~~~~-~~~-----~~~-fp~gTl~vNi~GsfllG~~~~~~~~~~~~~~--~~~~~~~l~tGf--- 74 (127)
T PRK14206 7 ALGSALGGTLRFWLSGLVA-EAT-----GGT-FPWGTLVINVSGSFLIGFFATLTGPEGRVFV--GESWRLFVMVGV--- 74 (127)
T ss_pred HHhHHHHHHHHHHHHHHHh-hcc-----cCC-CchHHHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHHHH---
Confidence 4888999888776532110 000 011 2345688999999998766533322111111 112222222221
Q ss_pred HhhcCccCccChhhcHhHhH----hhcCcCceeehhhhhHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAV----VANIWTDHWVYWAGPSLGGLVAGLLYTY 194 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~----~~~~~~~~~vy~~~p~~Ga~~a~~l~~~ 194 (216)
+ |..|--+ ++.... -.++|.....|++..++++++++.+-..
T Consensus 75 ~-GgfTTFS-----Tf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~~G~~ 120 (127)
T PRK14206 75 C-GGFTTFS-----SFSLQTLNLARDGDWLRAGGNVVLSVVFCLLAVWLGHV 120 (127)
T ss_pred c-cccccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222211 222222 2356766778999999999998876543
No 38
>KOG3030|consensus
Probab=45.17 E-value=74 Score=27.88 Aligned_cols=48 Identities=31% Similarity=0.578 Sum_probs=34.6
Q ss_pred cCccChhhcHhHhHhh--------cCcCceee-hhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510 153 GASMNPARTFGSAVVA--------NIWTDHWV-YWAGPSLGGLVAGLLYTYLFVAPS 200 (216)
Q Consensus 153 G~~lNPA~~l~~~~~~--------~~~~~~~v-y~~~p~~Ga~~a~~l~~~~~~~~~ 200 (216)
+-.+.|-..|.+.... .++++||. =+.|-++|.++|...++.+.+..+
T Consensus 210 ~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v~~~f~ 266 (317)
T KOG3030|consen 210 GRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYVFPNFK 266 (317)
T ss_pred chhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 3445666555555543 37889997 567899999999999999886644
No 39
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=41.50 E-value=2.5e+02 Score=24.75 Aligned_cols=24 Identities=38% Similarity=0.515 Sum_probs=19.7
Q ss_pred hhhhhHHHHHHHHHHHHHHhcCCC
Q psy1510 177 YWAGPSLGGLVAGLLYTYLFVAPS 200 (216)
Q Consensus 177 y~~~p~~Ga~~a~~l~~~~~~~~~ 200 (216)
+++.|++|..++.++++.+.+...
T Consensus 139 wvlsPii~~~ia~~l~~~~~~~~~ 162 (326)
T COG0306 139 WVLSPILGGVLAYLLYSLLRRLIV 162 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999988766543
No 40
>COG3301 NrfD Formate-dependent nitrite reductase, membrane component [Inorganic ion transport and metabolism]
Probab=40.47 E-value=2.5e+02 Score=24.42 Aligned_cols=132 Identities=22% Similarity=0.289 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCC---CCCh
Q psy1510 56 IIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPH---AKAP 132 (216)
Q Consensus 56 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~---~~~~ 132 (216)
+.+.+..+.+-.+|+.-|.++....-.+-.+ ++.....--+-.-.-++....++.+..+ +++.+ .+..
T Consensus 133 ~~~iL~~i~gi~~~aYTGflLaa~~giPFwN--------np~LPvLfL~sg~sag~a~~~L~~lv~~-~~~~~~~~~~~~ 203 (305)
T COG3301 133 ALEILMAILGVLLGAYTGFLLAALKGIPFWN--------NPALPVLFLFSGLSAGSAALILLMLVRT-RENPHSTESKFL 203 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccc--------CchhHHHHHHhhhhhhHHHHHHHHHHhc-CCCccchhhHHH
Confidence 4566677777777777777777643222111 1111221111112223333333333332 22221 1112
Q ss_pred hHHHHHHHHHHHHHHhhcCccCccCh---hhcHhHhHhhcCcCceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 133 AALAIGLTVALGHLAAVDFTGASMNP---ARTFGSAVVANIWTDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 133 ~~~~ig~~v~~~~~~~~~~sG~~lNP---A~~l~~~~~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
.-+-+...++-.........+.++|| +|++..++..+.| .|++|+|=..=+++...+..+-..+
T Consensus 204 ~r~~~~v~~~ell~la~f~~l~~~G~~a~~~a~~~al~gg~~--a~~fwiGV~giGliiplll~~~~~~ 270 (305)
T COG3301 204 HRFEIPVVVTELLLLAAFFVLLSLGGVAAARALATALAGGFW--AWVFWIGVLGLGLIIPLLLKFGVNP 270 (305)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHhhcccc
Confidence 22222222222222223345556777 4777777777778 7888887544334445544444433
No 41
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=40.26 E-value=13 Score=32.66 Aligned_cols=22 Identities=23% Similarity=0.277 Sum_probs=18.4
Q ss_pred HhhcccccccchHHHHHHHHhC
Q psy1510 31 ALGHVSGGHFNPAVTVGMLATG 52 (216)
Q Consensus 31 ~~~~iSGah~NPavTla~~l~g 52 (216)
+.+--+|||+.||+.++..+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 3456689999999999999875
No 42
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=40.24 E-value=1.3e+02 Score=22.54 Aligned_cols=109 Identities=13% Similarity=0.040 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-..-. ....+.-++..++.-.+++|++-+..-.... +...++. +...+.+. +
T Consensus 11 ~~GG~lGa~~Ry~l~~~~~-------~~~~~~fP~gTl~VN~~GsfllG~~~~~~~~-~~~~~~~---~~~~l~tG---f 76 (127)
T PRK14200 11 ALGGAFGACSRYLVSELCV-------VLLGRGFPYGTLTVNVVGSFIMGLLIAAFEN-ELLATEP---WRQIIGLG---F 76 (127)
T ss_pred HHHHHHHHHHHHHHHHHHH-------hhcCCCCchHHHHHHHHHHHHHHHHHHHHHh-ccCCCHH---HHHHHHHH---H
Confidence 3888999888776532110 0001112445788899999998766533322 1111111 21111111 1
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |..|--+ +++.... .++|.....|.+..++++++++.+-..+
T Consensus 77 ~-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 123 (127)
T PRK14200 77 L-GALTTFS-----TFSMDNVLLMQQGAFFKMGLNVLLNVVLSISAAWIGFQL 123 (127)
T ss_pred h-ccchhHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222111 2222222 3467677789999999999998875544
No 43
>PRK14217 camphor resistance protein CrcB; Provisional
Probab=38.20 E-value=1.6e+02 Score=22.35 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-..-. +.. ..+ -++..++.-.+++|++-+..-.... +...++. +...+....
T Consensus 10 ~iGG~lGa~~Ry~l~~~~~-~~~-----~~~-fP~gTl~VNi~GsfllG~~~~~~~~-~~~~~~~---~~~~l~tGf--- 75 (134)
T PRK14217 10 AIGGSLGAMSRYLVTIMAQ-NAW-----GIK-FPYGTLLVNTLGSFLAGFFLIVLVG-RFSAEES---FRLFLFTGF--- 75 (134)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhc-----CCC-CcHHHHHHHHHHHHHHHHHHHHHHh-ccCCCHH---HHHHHHHHH---
Confidence 3888999887776532110 000 011 2455788999999998766533221 2111111 222221111
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |.+|--+ +++.... .++|.....|++..++++++++++-..+
T Consensus 76 l-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 122 (134)
T PRK14217 76 L-GAFTTFS-----SFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFIGTLV 122 (134)
T ss_pred h-chhccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222111 1222222 3567677789999999999998865544
No 44
>PF03918 CcmH: Cytochrome C biogenesis protein; InterPro: IPR005616 Members of this family include NrfF, CcmH, CycL, Ccl2.; PDB: 2KW0_A 2HL7_A.
Probab=37.21 E-value=11 Score=29.16 Aligned_cols=29 Identities=28% Similarity=0.370 Sum_probs=0.0
Q ss_pred ceeehhhhhHHHHHHHHHHHHHHhcCCCC
Q psy1510 173 DHWVYWAGPSLGGLVAGLLYTYLFVAPSI 201 (216)
Q Consensus 173 ~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~ 201 (216)
..|+-|++|++.-+++.++......+.+.
T Consensus 100 ~~~~lW~~P~~~l~~g~~~~~~~~rr~~~ 128 (148)
T PF03918_consen 100 FTWLLWLGPFLLLLLGGALLFRRLRRWRR 128 (148)
T ss_dssp -----------------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 46888999999999988877666655543
No 45
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=36.60 E-value=97 Score=23.23 Aligned_cols=109 Identities=21% Similarity=0.208 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-.... . ...++ -++..++.-.+++|++-+..-...+ +...++ .+...+....
T Consensus 8 ~~Gg~~Ga~~Ry~l~~~~~-~-----~~~~~-fP~~Tl~vN~~GsfllG~~~~~~~~-~~~~~~---~~~~~l~tGf--- 73 (128)
T PRK14212 8 AAGGALGAVSRYGLNNLTV-K-----LLGDS-FPYGTLIVNCLGCFVLGFLMQWGFS-SDSHNT---HLKLMLTAGF--- 73 (128)
T ss_pred HHHHHHHHHHHHHHHHHHH-h-----cccCC-CchHHHHHHHHHHHHHHHHHHHHHh-ccCCCH---HHHHHHHhhH---
Confidence 3889999888876642110 0 00111 2345688999999998765433222 211111 2222222211
Q ss_pred HhhcCccCccChhhcHhHhH----hhcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAV----VANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~----~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |..|--+ ++.... -.++|.....|.+..++++++++.+-..+
T Consensus 74 l-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (128)
T PRK14212 74 L-GAFTTFS-----TFSYETLDCFKAGDYFNGFSNILANVLLGLLMVFIGAYL 120 (128)
T ss_pred h-cCcccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222211 122222 23567777789999999999988875544
No 46
>PRK14233 camphor resistance protein CrcB; Provisional
Probab=35.69 E-value=1.9e+02 Score=21.79 Aligned_cols=108 Identities=12% Similarity=-0.032 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-..-. + ....+ -++..++.-.+++|++-+..-.... +... .....+...+....
T Consensus 10 ~~Gg~~GA~lRy~l~~~~~-~-----~~~~~-fP~gTl~VNv~G~fllG~l~~~~~~-~~~~-~~~~~~~~~l~tGf--- 77 (133)
T PRK14233 10 LVGGFIGGVMRFFLSGYVG-R-----RIGET-FPWGTFVVNVSGAFVIGTAAGLGAR-LGGI-FSTTIFHEFIMVGL--- 77 (133)
T ss_pred HHHHHHHHHHHHHHHHHhh-h-----cccCC-CchHHHHHHHHHHHHHHHHHHHHHh-cccc-cCCHHHHHHHHHHH---
Confidence 4899999998877532110 0 00111 2345788899999998766533321 1110 00112222222211
Q ss_pred HhhcCccCccChhhcHhHhH----hhcCcCceeehhhhhHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAV----VANIWTDHWVYWAGPSLGGLVAGLLY 192 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~----~~~~~~~~~vy~~~p~~Ga~~a~~l~ 192 (216)
+ |..|--+ +++... ..++|.....|.+..++++++++.+-
T Consensus 78 ~-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG 121 (133)
T PRK14233 78 L-GGYTTVS-----SFCLQSVNLMLDGEQRQALFNIVASALLCVLAVAAG 121 (133)
T ss_pred c-cccccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222211 222222 23567778889999999999987754
No 47
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=34.85 E-value=1.5e+02 Score=22.37 Aligned_cols=109 Identities=21% Similarity=0.227 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-.... . .. +..-++..++.-.+++|++-+..-.... +...++ .+...+... +
T Consensus 7 ~lGg~lGa~~Ry~l~~~~~-~----~~--~~~fP~gTl~vNi~GsfllG~~~~~~~~-~~~~~~---~~~~~l~tG---f 72 (132)
T PRK14219 7 GIAGILGALSRYYLGLTIH-E----FW--HHTFPLATLLINLAGCFLLAWLTTYIAK-LNILPS---DVITGIGTG---F 72 (132)
T ss_pred HHHHHHHHHHHHHHHHHHH-h----cc--CCCCcHHHHHHHHHHHHHHHHHHHHHHh-ccCCCH---HHHHHHHHH---H
Confidence 3889999888876532110 0 00 1112455788999999998766533321 111111 122222111 1
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |..|-- -++..... .++|.....|.+..++++++++.+-..+
T Consensus 73 ~-GgfTTF-----STf~~E~~~l~~~~~~~~a~~y~~~sl~~gl~a~~lG~~l 119 (132)
T PRK14219 73 I-GSFTTF-----STFSVETIQLINHSEWSIAFLYVSCSILGGLIMSGLGYTL 119 (132)
T ss_pred c-cchhhH-----HHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111110 01222222 2467677789999999999988765443
No 48
>PRK14198 camphor resistance protein CrcB; Provisional
Probab=33.76 E-value=1.8e+02 Score=21.64 Aligned_cols=109 Identities=16% Similarity=0.056 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-.. .++ ...++ -++..++.-.+++|++-+..-...+ +...++ .+...+.+..
T Consensus 7 ~~GG~lGa~~Ry~l~~~-~~~-----~~~~~-fP~~Tl~vN~~GsfllG~l~~~~~~-~~~~~~---~~~~~l~tGf--- 72 (124)
T PRK14198 7 FVGGGLGASLRHAVNMA-SAR-----LLGTS-FPYGTFIINVSGSLVMGLIAGYLAF-KGGAPQ---HWRLFLMTGI--- 72 (124)
T ss_pred HHHHHHHHHHHHHHHHH-HHH-----hcCCC-CcHHHHHHHHHHHHHHHHHHHHHHh-ccCCCH---HHHHHHHHHH---
Confidence 48899999888765321 100 00111 2455788999999998766533322 211111 1222222211
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |..|--+ +++.... .++|.....|.+..++++++++.+-..+
T Consensus 73 l-GgfTTFS-----Tf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 119 (124)
T PRK14198 73 L-GGYTTFS-----AFSLDAALLYERGALGLAALYVLGSVALGIAGLFAGLAL 119 (124)
T ss_pred h-cccccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222211 2222222 3567777889999999999998875443
No 49
>PRK14231 camphor resistance protein CrcB; Provisional
Probab=33.62 E-value=1.6e+02 Score=22.03 Aligned_cols=107 Identities=15% Similarity=0.207 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-.- .. ..+ -++..++.-.+++|++-+......+ +...+ ..+...+....
T Consensus 7 ~lGG~~Ga~~Ry~l~~~-~~--------~~~-fP~gTl~vNi~GsfllG~l~~~~~~-~~~~~---~~~~~~l~tGf--- 69 (129)
T PRK14231 7 GVFGALGGMCRYAMNLW-LG--------GGD-FPSATLAVNLIGCFLLAFLMQFLAE-KSRIS---LVILNGIGTGF--- 69 (129)
T ss_pred HHhHHHHHHHHHHHHHH-hc--------CCC-CcHHHHHHHHHHHHHHHHHHHHHHh-ccCCC---HHHHHHHHhHH---
Confidence 48999999988865321 10 112 2355788999999998776533322 21111 11222222211
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHHh
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYLF 196 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~ 196 (216)
+ |..|--+ +++.... .++|.....|++..++++++++.+-..+-
T Consensus 70 l-GgfTTFS-----Tf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l~ 117 (129)
T PRK14231 70 I-GAFTTFS-----AFSVDTIQLVQSGAWLLAVSYVLASFIGGLIMVKFGRMLS 117 (129)
T ss_pred h-cccccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222111 1222222 35676777899999999999887655443
No 50
>PRK14227 camphor resistance protein CrcB; Provisional
Probab=32.92 E-value=1.6e+02 Score=21.85 Aligned_cols=109 Identities=12% Similarity=0.049 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-..- + ...+..-++..+..-.+++|++-+..-... ++...++ .+...+... +
T Consensus 8 ~~Gg~~Ga~~Ry~l~~~~-~------~~~~~~fP~gTl~vN~~GsfllG~~~~~~~-~~~~~~~---~~~l~l~tG---f 73 (124)
T PRK14227 8 AIGGSIGAILRYFTGVYS-A------KNLGLDFPYGTLIVNSVGSFILSFFMILFL-EKLSLDP---LWRLFVAVG---F 73 (124)
T ss_pred HHHHHHHHHHHHHHHHHH-H------hhCcCCCcHHHHHHHHHHHHHHHHHHHHHH-hccCCCH---HHHHHHHhh---H
Confidence 488999988777653211 0 000111234578899999999876543322 1111111 121111111 1
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |..|--+ ++..... .++|.....|++..++++++++.+-..+
T Consensus 74 ~-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~~~~lG~~l 120 (124)
T PRK14227 74 C-GSFTTFS-----SFTYETIALFQDGDYTKAMLNIILNNVLSITSAFSGIVL 120 (124)
T ss_pred h-cccccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222111 1222222 3567777789999999999998875443
No 51
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=32.12 E-value=1.3e+02 Score=27.20 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=20.9
Q ss_pred cCcCceeehhhhhHHHHHHHHHHHHHHhcCCCCCCCCCCccc
Q psy1510 169 NIWTDHWVYWAGPSLGGLVAGLLYTYLFVAPSIGEYSPVLVE 210 (216)
Q Consensus 169 ~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~~~~~~~~~~~~~ 210 (216)
+++++.|..++---+-. +..+.+-.+++++++..++.++++
T Consensus 386 ~~f~~l~~lili~~~~~-ll~l~ll~lLp~~~~~~~~~~~~~ 426 (433)
T PF03092_consen 386 DDFSNLWLLILICSVIQ-LLPLPLLFLLPPQKRITDELDADG 426 (433)
T ss_pred ccccchHHHHHHHHHHH-HHHHHHHHHcCCCchhhHHHhhcC
Confidence 35777776554333333 445555656666555444333333
No 52
>PRK10478 putative PTS system fructose-like transporter subunit EIIC; Provisional
Probab=31.15 E-value=1.4e+02 Score=26.75 Aligned_cols=24 Identities=21% Similarity=0.256 Sum_probs=18.6
Q ss_pred eeehhhhhHHHHHHHHHHHHHHhc
Q psy1510 174 HWVYWAGPSLGGLVAGLLYTYLFV 197 (216)
Q Consensus 174 ~~vy~~~p~~Ga~~a~~l~~~~~~ 197 (216)
.|.|+++=.+|.++++.+..++-+
T Consensus 313 ~l~~iiailig~vvtavl~~~~k~ 336 (359)
T PRK10478 313 KLGYIAAVAVGAVVTAVCVNVLKS 336 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 467899999999998887665544
No 53
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=29.78 E-value=1.7e+02 Score=21.81 Aligned_cols=109 Identities=13% Similarity=0.075 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+-..-. . .. .++ -++..++.-.+++|++-+..-.... +...++ .+...+... +
T Consensus 8 ~~Gg~~Ga~~Ry~l~~~~~-~----~~-~~~-fP~gTl~vNi~GsfllG~~~~~~~~-~~~~~~---~~~~~l~tG---f 73 (125)
T PRK14195 8 AAGGALGSVARYLVGVGAL-R----LM-GPA-FPWGTLAVNVTGSFLIGVLAGLLAH-RWNASQ---EWRLFLIVG---V 73 (125)
T ss_pred HHHHHHHHHHHHHHHHHHH-h----cc-CCC-CchHHHHHHHHHHHHHHHHHHHHHh-ccCCCH---HHHHHHHhH---h
Confidence 4889999988776532110 0 00 011 2345688899999998766533221 111111 122222111 1
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |..|--+ ++..... .++|.....|.+..++++++++.+-..+
T Consensus 74 ~-GgfTTFS-----Tf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (125)
T PRK14195 74 L-GGFTTFS-----AFSLDAALLIERGAYGAAAAYIAASVVLSVAALFAGLAI 120 (125)
T ss_pred c-cCcccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222211 2222222 2567677789999999999988765433
No 54
>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]. Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.
Probab=29.73 E-value=22 Score=23.51 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=1.5
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccc
Q psy1510 179 AGPSLGGLVAGLLYTYLFVAPSIGEYSPVLVED 211 (216)
Q Consensus 179 ~~p~~Ga~~a~~l~~~~~~~~~~~~~~~~~~~~ 211 (216)
.|-.+|.+++.++.-+++.+-+.+++-..+.+|
T Consensus 16 aG~Vvgll~ailLIlf~iyR~rkkdEGSY~l~e 48 (64)
T PF01034_consen 16 AGGVVGLLFAILLILFLIYRMRKKDEGSYDLDE 48 (64)
T ss_dssp ---------------------S------SS--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCC
Confidence 344555666666665555554444443333333
No 55
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=28.53 E-value=3.8e+02 Score=22.93 Aligned_cols=156 Identities=20% Similarity=0.259 Sum_probs=76.3
Q ss_pred chHHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCC----c-CCCce-----eecCCCCCchhhhHHHHHHH
Q psy1510 41 NPAVTVGMLATGKVSIIRAVFYVVAQCIGAISGSLILKALTPAD----F-QGNLG-----LTTLNKHLTPVQGMGIEFFL 110 (216)
Q Consensus 41 NPavTla~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~----~-~~~~~-----~~~~~~~~s~~~~~~~E~~~ 110 (216)
|--.+..-...+++++++.+--++-=.+|=++|+.++..++.-. . ++..+ ...-.-+.+..+.|.--.++
T Consensus 89 n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI~c 168 (265)
T COG2116 89 NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGILC 168 (265)
T ss_pred chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 33333444567899999888877777777777777666554111 0 00110 00111223445666666666
Q ss_pred HHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHhhcCccCccChhhcHhHhHhhc--CcCc-eee----hhhhhHH
Q psy1510 111 GFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHLAAVDFTGASMNPARTFGSAVVAN--IWTD-HWV----YWAGPSL 183 (216)
Q Consensus 111 T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~sG~~lNPA~~l~~~~~~~--~~~~-~~v----y~~~p~~ 183 (216)
-++..+.+...-.-|.. ...-+.+-+-+. .++..++.=...|-..---.+...+ .|.. .|- =.+|.++
T Consensus 169 N~lVclAvwm~~~~k~~---~~K~~~m~~pv~--~Fv~~GfeH~VANm~~i~~~~~~~~~~~~~~fi~~Nlipv~lGNiv 243 (265)
T COG2116 169 NWLVCLAVWMSYSAKDG---AAKIFAIILPVM--LFVASGFEHSVANMFMIPWAAVFSGALTWADFILKNLIPVTLGNIV 243 (265)
T ss_pred HHHHHHHHHHHhcccch---hhHHHHHHHHHH--HHHHcCCceeeehHHHHHHHHHcCChhhhHHHHHHHHHHHHHhchh
Confidence 66666666544321221 122233333332 2333444445666433221222222 3444 221 1245555
Q ss_pred H-HHHHHHHHHHHhcCCCC
Q psy1510 184 G-GLVAGLLYTYLFVAPSI 201 (216)
Q Consensus 184 G-a~~a~~l~~~~~~~~~~ 201 (216)
| +++-++.|.++++++.+
T Consensus 244 GG~v~vgl~Y~~~~~~~~~ 262 (265)
T COG2116 244 GGAVFVGLMYWYLYRKQNR 262 (265)
T ss_pred cchhhhhHHHHHhcccccc
Confidence 4 45567788887776543
No 56
>PF14990 DUF4516: Domain of unknown function (DUF4516)
Probab=27.50 E-value=1.6e+02 Score=18.24 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=29.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q psy1510 52 GKVSIIRAVFYVVAQCIGAISGSLILKALTPADF 85 (216)
Q Consensus 52 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~ 85 (216)
++.+|..-+....+-++-=++|+.+++.++.++.
T Consensus 3 ~Gv~~~~yl~~~~~s~~sM~aGA~vVH~~ykPdl 36 (47)
T PF14990_consen 3 AGVSWPSYLKSLVASLLSMLAGASVVHNIYKPDL 36 (47)
T ss_pred CCCcHHHHHHHHHHHHHHHHhhhHHHHHHhCccC
Confidence 4578888888888999999999999999999876
No 57
>PRK14221 camphor resistance protein CrcB; Provisional
Probab=27.34 E-value=2.3e+02 Score=21.02 Aligned_cols=103 Identities=15% Similarity=0.136 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHH
Q psy1510 66 QCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGH 145 (216)
Q Consensus 66 Q~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~ 145 (216)
=.+|+.+|+.+-|.+..--. . ... -++..++.-.+++|++-+..-.....+ ..+ .++...+....+
T Consensus 11 V~lGg~~Ga~~R~~l~~~~~-------~-~~~-fP~gTl~vNi~G~fllG~~~~~~~~~~-~~~---~~~~~~l~tGf~- 76 (124)
T PRK14221 11 IFLAAMLGGLVRYLVSTWLP-------A-SPD-FPWGTLFVNYLGIFCLIYLVKGYLVYK-GTS---KGLILALGTGFC- 76 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHc-------c-cCC-CchHHHHHHHHHHHHHHHHHHHHHhcc-cCC---HHHHHHHHHHHh-
Confidence 45899999988887532110 0 011 234568899999999876642221111 111 122222222211
Q ss_pred HHhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHH
Q psy1510 146 LAAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGL 190 (216)
Q Consensus 146 ~~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~ 190 (216)
|..|-- -++..... .++|.....|.+..++++++++.
T Consensus 77 ---GgfTTF-----STf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~~~~ 117 (124)
T PRK14221 77 ---GGLTTF-----SSLMLDTVKLLDTGRYLSLILYLLLSIGGGLLLAY 117 (124)
T ss_pred ---chhhhH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 112110 01222222 24677778899999999998655
No 58
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=27.31 E-value=4.1e+02 Score=24.07 Aligned_cols=30 Identities=23% Similarity=0.274 Sum_probs=20.0
Q ss_pred hcCcCceeehhhhhHHHHHHHHHHHHHHhcC
Q psy1510 168 ANIWTDHWVYWAGPSLGGLVAGLLYTYLFVA 198 (216)
Q Consensus 168 ~~~~~~~~vy~~~p~~Ga~~a~~l~~~~~~~ 198 (216)
+++++..|..++...+-.++...+ -+++|+
T Consensus 418 ~~~~~~~~~~i~i~~~~~l~~l~~-~~llP~ 447 (468)
T TIGR00788 418 CDNSNNLWLLILGHSLAPLLPLPL-LHLLPR 447 (468)
T ss_pred cccccchHHHHHHHHHHHHHHHHH-HHhCCC
Confidence 457888888887777777664443 346665
No 59
>PRK14222 camphor resistance protein CrcB; Provisional
Probab=27.20 E-value=2.6e+02 Score=20.68 Aligned_cols=109 Identities=18% Similarity=0.092 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGHL 146 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~~ 146 (216)
.+|+.+|+.+-|.+...-. ...++.-++..++.-.+++|++-+..-... ++...++ .+...+....
T Consensus 8 ~lGg~~Ga~~Ry~l~~~~~-------~~~~~~fP~gTl~vN~~GsfllG~~~~~~~-~~~~~~~---~~~~~l~tGf--- 73 (124)
T PRK14222 8 ALFGALGCLARYYLSGWVY-------ALFGRAFPYGTLAVNVIGAFLIGLIMEFSL-RSTLIPP---TLRIGLTIGF--- 73 (124)
T ss_pred HHHHHHHHHHHHHHHHHHH-------hhcCCCCcHHHHHHHHHHHHHHHHHHHHHH-hcCCCCH---HHHHHHHHHH---
Confidence 4889999888776532110 000111234568899999999875543322 1111111 2222222111
Q ss_pred HhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 147 AAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 147 ~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
+ |..|--+ ++..... .++|.....|++..++++++++.+-..+
T Consensus 74 ~-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 120 (124)
T PRK14222 74 L-GGLTTFS-----TFSYETFRLLEDGELLIASVNVLASVVVCLVCTWLGIMT 120 (124)
T ss_pred c-ccchhHH-----HHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222111 1222222 3567677789999999999988765443
No 60
>PF14034 Spore_YtrH: Sporulation protein YtrH
Probab=27.06 E-value=2e+02 Score=20.86 Aligned_cols=47 Identities=26% Similarity=0.564 Sum_probs=35.0
Q ss_pred ccccchHHHHHHHH-hCCC-chhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy1510 37 GGHFNPAVTVGMLA-TGKV-SIIRAVFYVVAQCIGAISGSLILKALTPA 83 (216)
Q Consensus 37 Gah~NPavTla~~l-~g~~-~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~ 83 (216)
|+.|.|--.+-.=+ .|.. +..|=+.|+++-++||-.|..+.+++.++
T Consensus 53 GGTfd~~~~iE~g~~~G~~~~~~KQ~l~Il~Af~GA~~g~~lI~wl~~~ 101 (102)
T PF14034_consen 53 GGTFDTFRSIEKGFFEGELSDIIKQLLYILSAFLGAHTGYILIRWLTGG 101 (102)
T ss_pred hcCchHHHHHHhHhcCCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHcC
Confidence 56677666665533 3443 36788999999999999999999887553
No 61
>PF06592 DUF1138: Protein of unknown function (DUF1138); InterPro: IPR009515 This family consists of several hypothetical short plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown.
Probab=26.45 E-value=92 Score=21.03 Aligned_cols=25 Identities=16% Similarity=0.274 Sum_probs=19.6
Q ss_pred hhhhhHHHHHHHHHHHHHHhcCCCC
Q psy1510 177 YWAGPSLGGLVAGLLYTYLFVAPSI 201 (216)
Q Consensus 177 y~~~p~~Ga~~a~~l~~~~~~~~~~ 201 (216)
|+++.++|++..+......+..++.
T Consensus 3 yIi~al~gsfa~ay~c~~~vs~~K~ 27 (73)
T PF06592_consen 3 YIIGALAGSFAVAYVCDQYVSDKKI 27 (73)
T ss_pred EEeehHHHHHHHHHHHHHHHhcccc
Confidence 7889999999988887777666554
No 62
>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]
Probab=26.40 E-value=4.5e+02 Score=23.18 Aligned_cols=69 Identities=17% Similarity=0.149 Sum_probs=38.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcC-----CCce-------eecCCCCCchhhhHHHHHHHHHHHHHHHHh
Q psy1510 53 KVSIIRAVFYVVAQCIGAISGSLILKALTPADFQ-----GNLG-------LTTLNKHLTPVQGMGIEFFLGFVLVLVIFG 120 (216)
Q Consensus 53 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-----~~~~-------~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~ 120 (216)
...+++-+--.+.-++|.++...++.+.+..+.. ..+| ..+-+|--..|..+....+..++=+.+.+.
T Consensus 22 ~v~~rerl~~~~gA~iGilltg~~c~~~~~~~~~lpllvAPmGASAVLLFavpaSPLAQPwsiiGGNlvaAlvgvtva~~ 101 (382)
T COG3448 22 PVRLRERLRAAIGALIGILLTGLACGYVLGVDPNLPLLVAPMGASAVLLFAVPASPLAQPWSIIGGNLVAALVGVTVAYF 101 (382)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCcchhccccCcceEEEEeccCCccccchhhhcchHHHHHHhhhhhhh
Confidence 3456677777777788888887777776665431 1112 112223334555555666666555555444
Q ss_pred h
Q psy1510 121 V 121 (216)
Q Consensus 121 ~ 121 (216)
+
T Consensus 102 v 102 (382)
T COG3448 102 V 102 (382)
T ss_pred h
Confidence 4
No 63
>PRK14210 camphor resistance protein CrcB; Provisional
Probab=25.11 E-value=2.2e+02 Score=21.25 Aligned_cols=112 Identities=21% Similarity=0.112 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHH
Q psy1510 66 QCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIGLTVALGH 145 (216)
Q Consensus 66 Q~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig~~v~~~~ 145 (216)
=.+|+.+|+.+-|.+..-- ++.. .++...-++..++.-.+++|++-+..-.. . +...++ .+...+...
T Consensus 7 V~~GG~lGa~~Ry~l~~~~-~~~~---~~~~~~fP~gTl~vNv~GsfllG~l~~~~-~-~~~~~~---~~~~~l~tG--- 74 (127)
T PRK14210 7 IFIGGGMGSVTRYLTQIAV-NERL---SPALFPFPWGTFAVNIIGSLLIGFFYSFS-E-RFNLSF---ELRLFLTVG--- 74 (127)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhcc---ccccCCccHHHHHHHHHHHHHHHHHHHHH-h-ccCCCH---HHHHHHHhh---
Confidence 3489999998888753211 0000 00000124456889999999987765322 1 221111 122222221
Q ss_pred HHhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 146 LAAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 146 ~~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
++ |..|--+ +++.... .++|.....|++..++++++++.+-..+
T Consensus 75 f~-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 122 (127)
T PRK14210 75 FC-GGFTTFS-----TLANDSLSLLKGGFYGIFTFYVFISILLGLLAVLAGGYL 122 (127)
T ss_pred hh-cCcccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 2222211 2222222 3567777889999999999998876544
No 64
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=24.30 E-value=4.6e+02 Score=22.50 Aligned_cols=60 Identities=18% Similarity=0.043 Sum_probs=41.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHH
Q psy1510 53 KVSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLV 115 (216)
Q Consensus 53 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~ 115 (216)
..++...+-+++.|-+=+-+|+.+.+...+++.++. ...+ .+.+..+..+.|...|++=-
T Consensus 96 ~~pl~e~Lg~vivl~vP~sIGaAlaR~~L~~~~~~~--~~~~-~~~~~~~~~l~dl~~~~~GA 155 (271)
T TIGR02587 96 ETSLKEIVGKVAFQGVPFSLGAALARQQLGDTNQNN--SLSE-GKQNSEYGYLAELFAMLVGA 155 (271)
T ss_pred CCCHHHHHHHHHHHhCcHHHHHHHHHHHhCCCcCcc--ccch-hhhcchhhhHHHHHHHHHHH
Confidence 357899999999999999999999999887664220 0111 12245566777777776643
No 65
>PF09622 DUF2391: Putative integral membrane protein (DUF2391); InterPro: IPR024464 Members of this protein family are found in archaea and bacteria. Their function is unknown.
Probab=24.23 E-value=4.3e+02 Score=22.60 Aligned_cols=63 Identities=11% Similarity=0.051 Sum_probs=41.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCce-eecCCCCCchhhhHHHHHHHHHHHHH
Q psy1510 54 VSIIRAVFYVVAQCIGAISGSLILKALTPADFQGNLG-LTTLNKHLTPVQGMGIEFFLGFVLVL 116 (216)
Q Consensus 54 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~E~~~T~~l~~ 116 (216)
.++...+..++.|..=+-.|+.+.+...+++..+.-. .....+....+..+..|++|.+++-+
T Consensus 93 ~~~~e~lgkiiv~~vP~siGa~la~~~L~~~~~~~~~~~~~~~~~~~~~~Dl~q~~vGA~~lA~ 156 (267)
T PF09622_consen 93 TPPREALGKIIVQSVPASIGAALARSQLGGDSDEEEEEEEEDKPERGYLADLGQMIVGALFLAF 156 (267)
T ss_pred CCHHHHhHhheeeEecHHHHHHHHHHHcCCCCCcccccccccccccccHHHHHHHHHHHHHHhc
Confidence 5578889999999999999999999988765422110 00112333455667777777776554
No 66
>PF09163 Form-deh_trans: Formate dehydrogenase N, transmembrane; InterPro: IPR015246 The transmembrane domain of the beta subunit of formate dehydrogenase consists of a single transmembrane helix. This domain acts as a transmembrane anchor, allowing the conduction of electrons within the protein []. ; PDB: 1KQG_B 1KQF_B.
Probab=23.90 E-value=1.2e+02 Score=18.43 Aligned_cols=22 Identities=9% Similarity=-0.037 Sum_probs=10.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCC
Q psy1510 180 GPSLGGLVAGLLYTYLFVAPSI 201 (216)
Q Consensus 180 ~p~~Ga~~a~~l~~~~~~~~~~ 201 (216)
.-+.+++++++++....++++.
T Consensus 18 ~~~~~~~~~~~~Hyi~vGPn~v 39 (44)
T PF09163_consen 18 AGMGATAAAGFFHYITVGPNRV 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHH--B-S
T ss_pred HHHHHHHHHHHHHHhhcCCCCC
Confidence 3345566666666666666554
No 67
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=23.45 E-value=3.2e+02 Score=20.41 Aligned_cols=114 Identities=10% Similarity=0.012 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCCCCCChhHHHHH
Q psy1510 59 AVFYVVAQCIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKPHAKAPAALAIG 138 (216)
Q Consensus 59 ~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~~~~~~~~~~ig 138 (216)
.+.|+. =.+|+.+|+.+-|.+-..-. +.. ... -++..+..-.+++|++-+..-... ++...++. +...
T Consensus 4 ~~~~l~-V~~GG~~GA~~Ry~l~~~~~-~~~-----~~~-fP~gTl~VNi~GsfllG~~~~~~~-~~~~~~~~---~~~~ 71 (128)
T PRK14199 4 LILAII-VGLGGFIGASLRYLISIFAA-KMF-----NGN-FPYGTLIVNIVGALLIGFIMEFSM-DTALISSN---MKLF 71 (128)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHH-hhc-----cCC-CchHHHHHHHHHHHHHHHHHHHHH-hccCCCHH---HHHH
Confidence 344433 34899999988887632110 000 011 234568889999999876543322 11111111 2212
Q ss_pred HHHHHHHHHhhcCccCccChhhcHhHhHh----hcCcCceeehhhhhHHHHHHHHHHHH
Q psy1510 139 LTVALGHLAAVDFTGASMNPARTFGSAVV----ANIWTDHWVYWAGPSLGGLVAGLLYT 193 (216)
Q Consensus 139 ~~v~~~~~~~~~~sG~~lNPA~~l~~~~~----~~~~~~~~vy~~~p~~Ga~~a~~l~~ 193 (216)
+.... + |..|--+ ++..... .++|.+...|++..++++++++.+-.
T Consensus 72 l~tGf---~-GgfTTFS-----Tf~~E~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~ 121 (128)
T PRK14199 72 LTTGI---M-GGLTTFS-----TFSYETINLITNGNILLGIENIILNLGLSLLGVVIGQ 121 (128)
T ss_pred HHhHH---h-cccccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111 1 2222211 2222222 34677778899999999999887654
No 68
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=22.54 E-value=23 Score=31.13 Aligned_cols=20 Identities=5% Similarity=-0.056 Sum_probs=16.9
Q ss_pred hcCccCccChhhcHhHhHhh
Q psy1510 149 VDFTGASMNPARTFGSAVVA 168 (216)
Q Consensus 149 ~~~sG~~lNPA~~l~~~~~~ 168 (216)
++-||+|+.||.+++..+-.
T Consensus 8 ~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 8 GGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred cCCcHHHHHHHHHHHHHHHh
Confidence 34599999999999998864
No 69
>PRK14213 camphor resistance protein CrcB; Provisional
Probab=21.79 E-value=1.9e+02 Score=21.32 Aligned_cols=28 Identities=7% Similarity=0.150 Sum_probs=22.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy1510 54 VSIIRAVFYVVAQCIGAISGSLILKALT 81 (216)
Q Consensus 54 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~ 81 (216)
-++..+..|+..+++++++++.+-+.+.
T Consensus 90 ~~~~~a~~y~~~s~~~gl~a~~~G~~l~ 117 (118)
T PRK14213 90 KRVKESILYIALTLAGSLLAFWCGWTII 117 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4567889999999999999887766543
No 70
>PRK10805 formate transporter; Provisional
Probab=21.66 E-value=5.2e+02 Score=22.18 Aligned_cols=80 Identities=14% Similarity=0.176 Sum_probs=40.7
Q ss_pred chHHHHHHHHhCCCchhHHHHHHH----HHHHHHHHHHHHHHhhcCCCc-CCCce-----eecCCCCCchhhhHHHHHHH
Q psy1510 41 NPAVTVGMLATGKVSIIRAVFYVV----AQCIGAISGSLILKALTPADF-QGNLG-----LTTLNKHLTPVQGMGIEFFL 110 (216)
Q Consensus 41 NPavTla~~l~g~~~~~~~~~yi~----aQ~lGa~~g~~l~~~~~~~~~-~~~~~-----~~~~~~~~s~~~~~~~E~~~ 110 (216)
|-..++ ..+.||.++++.+-.+. .-++|+++-+.+.+..-.... .+..+ ...-..+.+.++.|+-=.++
T Consensus 93 n~l~~~-~~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gI~C 171 (285)
T PRK10805 93 TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILA 171 (285)
T ss_pred hHHHHH-HHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 655554 36789999988884444 455555554444432211000 00000 00011133566666666777
Q ss_pred HHHHHHHHHhh
Q psy1510 111 GFVLVLVIFGV 121 (216)
Q Consensus 111 T~~l~~~v~~~ 121 (216)
-++..+.++..
T Consensus 172 N~lVclaV~~~ 182 (285)
T PRK10805 172 NLMVCLAVWMS 182 (285)
T ss_pred HHHHHHHHHHH
Confidence 77777776643
No 71
>PRK14203 camphor resistance protein CrcB; Provisional
Probab=21.28 E-value=3.6e+02 Score=20.21 Aligned_cols=110 Identities=14% Similarity=-0.017 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhhcCCCcCCCceeecCCCCCchhhhHHHHHHHHHHHHHHHHhhccCCCC-CCCChhHHHHHHHHHHHH
Q psy1510 67 CIGAISGSLILKALTPADFQGNLGLTTLNKHLTPVQGMGIEFFLGFVLVLVIFGVCDGNKP-HAKAPAALAIGLTVALGH 145 (216)
Q Consensus 67 ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~T~~l~~~v~~~~~~~~~-~~~~~~~~~ig~~v~~~~ 145 (216)
.+|+.+|+.+-|.+-.. .++ .....-++..++.-.+++|++-+..-...+++.. ..+... +.++..
T Consensus 12 ~~GG~~GA~~Ry~l~~~-~~~------~~~~~fP~~Tl~VNi~GsfllG~l~~~~~~~~~~~~~~~~~-l~l~tG----- 78 (132)
T PRK14203 12 ALGSVLGGPARFFLSGL-VAR------RIGETFPWGTLTVNVSGAFAIGIFGALAASGHGLFALPAPW-LFAVTG----- 78 (132)
T ss_pred HHHHHHHHHHHHHHHHH-Hhh------cccCCCchHHHHHHHHHHHHHHHHHHHHHhhccccCChHHH-HHHHHH-----
Confidence 48889998887765321 100 0011124456889999999987665333221110 111111 111111
Q ss_pred HHhhcCccCccChhhcHhHhH----hhcCcCceeehhhhhHHHHHHHHHHHHHH
Q psy1510 146 LAAVDFTGASMNPARTFGSAV----VANIWTDHWVYWAGPSLGGLVAGLLYTYL 195 (216)
Q Consensus 146 ~~~~~~sG~~lNPA~~l~~~~----~~~~~~~~~vy~~~p~~Ga~~a~~l~~~~ 195 (216)
++ |..|--+ +++... -.++|.....|++..++++++++.+-..+
T Consensus 79 fl-GgfTTFS-----Tf~~e~~~l~~~~~~~~a~~y~~~s~~~gl~a~~lG~~l 126 (132)
T PRK14203 79 FL-GCYTTVS-----SFSLQTLTLARDGEFLRALGNVAFSLILCLIAVAIGFAA 126 (132)
T ss_pred Hh-chhccHH-----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 2222111 222222 23567677789999999999998775443
No 72
>PRK09713 focB putative formate transporter; Provisional
Probab=21.24 E-value=5.3e+02 Score=22.12 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=38.9
Q ss_pred HHhCCCchhHHHHHH----HHHHHHHHHHHHHHHhhcCCCcCCC-ce-----eecCCCCCchhhhHHHHHHHHHHHHHHH
Q psy1510 49 LATGKVSIIRAVFYV----VAQCIGAISGSLILKALTPADFQGN-LG-----LTTLNKHLTPVQGMGIEFFLGFVLVLVI 118 (216)
Q Consensus 49 ~l~g~~~~~~~~~yi----~aQ~lGa~~g~~l~~~~~~~~~~~~-~~-----~~~~~~~~s~~~~~~~E~~~T~~l~~~v 118 (216)
...||+++++.+-.+ +.-++|+++-+.+.+..-....... .+ .-.-..+.+..+.|+--.++-++..+.+
T Consensus 99 ~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~~~~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV 178 (282)
T PRK09713 99 KSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLAL 178 (282)
T ss_pred HHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 568899998888544 4555555555544432111000000 00 0001123456777777778888887777
Q ss_pred Hhh
Q psy1510 119 FGV 121 (216)
Q Consensus 119 ~~~ 121 (216)
+..
T Consensus 179 ~~~ 181 (282)
T PRK09713 179 WMS 181 (282)
T ss_pred HHH
Confidence 644
No 73
>PRK11427 multidrug efflux system protein MdtO; Provisional
Probab=20.26 E-value=8.2e+02 Score=23.96 Aligned_cols=29 Identities=24% Similarity=0.208 Sum_probs=24.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy1510 54 VSIIRAVFYVVAQCIGAISGSLILKALTP 82 (216)
Q Consensus 54 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 82 (216)
.+..|....++..++|+++|..+...+.+
T Consensus 393 aT~sRa~~RiiGTliGallA~ll~v~l~P 421 (683)
T PRK11427 393 SSYQKMVLRFGGAFCGAILALLFTLLVMP 421 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34678999999999999999998877654
Done!