BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15100
(165 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22807|SLOU_DROME Homeobox protein slou OS=Drosophila melanogaster GN=slou PE=2 SV=1
Length = 659
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 84/114 (73%), Gaps = 10/114 (8%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDV 103
+AFTYEQLV+LENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDV
Sbjct: 550 TAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDV 609
Query: 104 NSPTVPTCPGGSHSGPAFPFHPALSGPGGHYSGTAHYPYAAAAAAYFHHLGAHH 157
NSPT+P GGS A+ G YS YP YFH LGAHH
Sbjct: 610 NSPTIPPPGGGSFGPGAY-------ASGLLYSHAVPYP---PYGPYFHPLGAHH 653
>sp|P15858|EMS_APIME Homeobox protein H40 (Fragment) OS=Apis mellifera PE=4 SV=1
Length = 74
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/60 (96%), Positives = 59/60 (98%)
Query: 46 FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNS 105
FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG+DV S
Sbjct: 15 FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGLDVIS 74
>sp|Q15270|NKX11_HUMAN NK1 transcription factor-related protein 1 OS=Homo sapiens
GN=NKX1-1 PE=2 SV=2
Length = 411
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 97/174 (55%), Gaps = 37/174 (21%)
Query: 14 SATSAKTPPVRRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLA 73
+AT+AK P R+ G + P +AFTYEQLVALENKFK TRYLSVCERLNLA
Sbjct: 239 TATAAK--PKRKRTGSDSKSGKPRRA---RTAFTYEQLVALENKFKATRYLSVCERLNLA 293
Query: 74 LSLSLTETQVKIWFQNRRTKWKKQNPGMDVN-----------------------SPTVPT 110
LSLSLTETQVKIWFQNRRTKWKKQNPG D + SP P+
Sbjct: 294 LSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPS 353
Query: 111 CPGGS---HSGPA-FPFHPALSGPGGHYSGTAHYPYAAAAAAYFHHLGAHHTHG 160
P G+ GPA +P H GPGG A P+ ++ A + T+G
Sbjct: 354 PPMGAPLGMHGPAGYPAH----GPGGLVC-AAQLPFLSSPAVLSPFVLGSQTYG 402
>sp|P53547|HM01_CAEEL Homeobox protein ceh-1 (Fragment) OS=Caenorhabditis elegans
GN=ceh-1 PE=4 SV=1
Length = 132
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDV 103
+AFTYEQLVALENKFKT+RYLSV ERLNLA+ L L+ETQVKIWFQNRRTKWKK NPG D
Sbjct: 6 TAFTYEQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWKKHNPGQDA 65
Query: 104 NSPTVPTCPGGSHSGPAFPFHPALS 128
N+P P + P P +P S
Sbjct: 66 NTPQTPPSSDETQIQPILPANPITS 90
>sp|Q9UD57|NKX12_HUMAN NK1 transcription factor-related protein 2 OS=Homo sapiens
GN=NKX1-2 PE=2 SV=3
Length = 310
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMD 102
+AFTYEQLVALENKF+ TRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG D
Sbjct: 168 TAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGAD 226
>sp|P42580|NKX12_MOUSE NK1 transcription factor-related protein 2 OS=Mus musculus
GN=Nkx1-2 PE=1 SV=1
Length = 305
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMD 102
+AFTYEQLVALENKF+ TRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG D
Sbjct: 161 TAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGAD 219
>sp|P19601|SAX1_CHICK Homeobox protein SAX-1 (Fragment) OS=Gallus gallus GN=SAX1 PE=2
SV=2
Length = 232
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/55 (92%), Positives = 53/55 (96%)
Query: 43 ESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 97
+AFTYEQLVALENKF+ TRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ
Sbjct: 69 RTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 123
>sp|Q9BZE3|BARH1_HUMAN BarH-like 1 homeobox protein OS=Homo sapiens GN=BARHL1 PE=2 SV=1
Length = 327
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 15 ATSAKTPPVRRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLAL 74
++S +PPVR + R T AFT QL LE F+ +YLSV +R+ LA
Sbjct: 165 SSSRDSPPVRLKKPRKART-----------AFTDHQLAQLERSFERQKYLSVQDRMELAA 213
Query: 75 SLSLTETQVKIWFQNRRTKWKKQ 97
SL+LT+TQVK W+QNRRTKWK+Q
Sbjct: 214 SLNLTDTQVKTWYQNRRTKWKRQ 236
>sp|P63156|BARH1_RAT BarH-like 1 homeobox protein OS=Rattus norvegicus GN=Barhl1 PE=2
SV=1
Length = 327
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 15 ATSAKTPPVRRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLAL 74
++S +PPVR + R T AFT QL LE F+ +YLSV +R+ LA
Sbjct: 165 SSSRDSPPVRLKKPRKART-----------AFTDHQLAQLERSFERQKYLSVQDRMELAA 213
Query: 75 SLSLTETQVKIWFQNRRTKWKKQ 97
SL+LT+TQVK W+QNRRTKWK+Q
Sbjct: 214 SLNLTDTQVKTWYQNRRTKWKRQ 236
>sp|P63157|BARH1_MOUSE BarH-like 1 homeobox protein OS=Mus musculus GN=Barhl1 PE=2 SV=1
Length = 327
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 11/83 (13%)
Query: 15 ATSAKTPPVRRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLAL 74
++S +PPVR + R T AFT QL LE F+ +YLSV +R+ LA
Sbjct: 165 SSSRDSPPVRLKKPRKART-----------AFTDHQLAQLERSFERQKYLSVQDRMELAA 213
Query: 75 SLSLTETQVKIWFQNRRTKWKKQ 97
SL+LT+TQVK W+QNRRTKWK+Q
Sbjct: 214 SLNLTDTQVKTWYQNRRTKWKRQ 236
>sp|P50219|MNX1_HUMAN Motor neuron and pancreas homeobox protein 1 OS=Homo sapiens
GN=MNX1 PE=1 SV=3
Length = 401
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P +AFT +QL+ LE++FK +YLS +R +A SL LTETQVKIWFQNRR KWK+
Sbjct: 244 PRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKR 298
>sp|Q9NY43|BARH2_HUMAN BarH-like 2 homeobox protein OS=Homo sapiens GN=BARHL2 PE=2 SV=2
Length = 387
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 11/82 (13%)
Query: 16 TSAKTPPVRRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLALS 75
+S ++PPVR + R T AF+ QL LE F+ +YLSV +R++LA +
Sbjct: 220 SSRESPPVRAKKPRKART-----------AFSDHQLNQLERSFERQKYLSVQDRMDLAAA 268
Query: 76 LSLTETQVKIWFQNRRTKWKKQ 97
L+LT+TQVK W+QNRRTKWK+Q
Sbjct: 269 LNLTDTQVKTWYQNRRTKWKRQ 290
>sp|Q8VIB5|BARH2_MOUSE BarH-like 2 homeobox protein OS=Mus musculus GN=Barhl2 PE=2 SV=2
Length = 384
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 11/82 (13%)
Query: 16 TSAKTPPVRRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLALS 75
+S ++PPVR + R T AF+ QL LE F+ +YLSV +R++LA +
Sbjct: 217 SSRESPPVRAKKPRKART-----------AFSDHQLNQLERSFERQKYLSVQDRMDLAAA 265
Query: 76 LSLTETQVKIWFQNRRTKWKKQ 97
L+LT+TQVK W+QNRRTKWK+Q
Sbjct: 266 LNLTDTQVKTWYQNRRTKWKRQ 287
>sp|O88181|BARH2_RAT BarH-like 2 homeobox protein OS=Rattus norvegicus GN=Barhl2 PE=2
SV=1
Length = 384
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 11/82 (13%)
Query: 16 TSAKTPPVRRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLALS 75
+S ++PPVR + R T AF+ QL LE F+ +YLSV +R++LA +
Sbjct: 217 SSRESPPVRAKKPRKART-----------AFSDHQLNQLERSFERQKYLSVQDRMDLAAA 265
Query: 76 LSLTETQVKIWFQNRRTKWKKQ 97
L+LT+TQVK W+QNRRTKWK+Q
Sbjct: 266 LNLTDTQVKTWYQNRRTKWKRQ 287
>sp|Q9QZW9|MNX1_MOUSE Motor neuron and pancreas homeobox protein 1 OS=Mus musculus
GN=Mnx1 PE=2 SV=2
Length = 404
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P +AFT +QL+ LE++FK +YLS +R +A SL LTETQVKIWFQNRR KWK+
Sbjct: 244 PRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKR 298
>sp|Q4V5A3|UNPG_DROME Homeobox protein unplugged OS=Drosophila melanogaster GN=unpg PE=2
SV=1
Length = 485
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGM 101
+AFT EQL+ LE +F +YLS+ ER +A SL L+E QVKIWFQNRR KWK+ G+
Sbjct: 324 TAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGL 381
>sp|Q28ZA9|UNPG_DROPS Homeobox protein unplugged OS=Drosophila pseudoobscura
pseudoobscura GN=unpg PE=3 SV=1
Length = 491
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGM 101
+AFT EQL+ LE +F +YLS+ ER +A SL L+E QVKIWFQNRR KWK+ G+
Sbjct: 328 TAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKWKRVKAGL 385
>sp|P50223|HMGX7_CHICK Homeobox protein GHOX-7 OS=Gallus gallus GN=GHOX-7 PE=2 SV=1
Length = 288
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 164 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 218
>sp|Q2VL86|MSX1_SAIBB Homeobox protein MSX-1 OS=Saimiri boliviensis boliviensis GN=MSX1
PE=3 SV=1
Length = 297
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q9NP08|HMX1_HUMAN Homeobox protein HMX1 OS=Homo sapiens GN=HMX1 PE=2 SV=2
Length = 348
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 37/52 (71%)
Query: 46 FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 97
F+ Q+ LE+ F RYLS ER LA SL LTETQVKIWFQNRR KWK+Q
Sbjct: 210 FSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQ 261
>sp|Q9VEI9|HMX_DROME Homeobox protein Hmx OS=Drosophila melanogaster GN=Hmx PE=2 SV=3
Length = 592
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 38/55 (69%)
Query: 43 ESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 97
+ F+ Q+ LE+ F RYLS ER LA SL LTETQVKIWFQNRR KWK+Q
Sbjct: 472 RTVFSRAQVFQLESTFDLKRYLSSSERAGLAASLRLTETQVKIWFQNRRNKWKRQ 526
>sp|Q2VL80|MSX1_PERPO Homeobox protein MSX-1 OS=Perodicticus potto edwarsi GN=MSX1 PE=3
SV=1
Length = 297
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL79|MSX1_DAUMA Homeobox protein MSX-1 OS=Daubentonia madagascariensis GN=MSX1 PE=3
SV=1
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL82|MSX1_SAGOE Homeobox protein MSX-1 OS=Saguinus oedipus GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL77|MSX1_LEPED Homeobox protein MSX-1 OS=Lepilemur edwardsi GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL83|MSX1_LEORO Homeobox protein MSX-1 OS=Leontopithecus rosalia GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL84|MSX1_CALJA Homeobox protein MSX-1 OS=Callithrix jacchus GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL85|MSX1_CALGO Homeobox protein MSX-1 OS=Callimico goeldii GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL87|MSX1_MACMU Homeobox protein MSX-1 OS=Macaca mulatta GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL88|MSX1_PANTR Homeobox protein MSX-1 OS=Pan troglodytes GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|P28360|MSX1_HUMAN Homeobox protein MSX-1 OS=Homo sapiens GN=MSX1 PE=1 SV=2
Length = 297
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|P48031|GBX2_MOUSE Homeobox protein GBX-2 OS=Mus musculus GN=Gbx2 PE=2 SV=1
Length = 348
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDV 103
+AFT EQL+ LE +F +YLS+ ER +A +L L+E QVKIWFQNRR KWK+ G +
Sbjct: 252 TAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAG-NA 310
Query: 104 NSPT 107
NS T
Sbjct: 311 NSKT 314
>sp|Q22909|HM30_CAEEL Homeobox protein ceh-30 OS=Caenorhabditis elegans GN=ceh-30 PE=2
SV=2
Length = 237
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 46 FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-NPGMDV 103
FT +QL LEN F+ +YLSV +R++LA + LT+TQVK W+QNRRTKWK+Q GMD+
Sbjct: 102 FTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQATSGMDL 160
>sp|A8XJD0|HM30_CAEBR Homeobox protein ceh-30 OS=Caenorhabditis briggsae GN=ceh-30 PE=3
SV=1
Length = 233
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 27 RGRSPNTQTP--SEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVK 84
R SP+ +P + + FT +QL LEN F+ +YLSV +R++LA + L++TQVK
Sbjct: 74 RASSPDRNSPMSKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLSDTQVK 133
Query: 85 IWFQNRRTKWKKQ-NPGMDV 103
W+QNRRTKWK+Q GMD+
Sbjct: 134 TWYQNRRTKWKRQATSGMDL 153
>sp|P52951|GBX2_HUMAN Homeobox protein GBX-2 OS=Homo sapiens GN=GBX2 PE=2 SV=3
Length = 348
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDV 103
+AFT EQL+ LE +F +YLS+ ER +A +L L+E QVKIWFQNRR KWK+ G +
Sbjct: 252 TAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAG-NA 310
Query: 104 NSPT 107
NS T
Sbjct: 311 NSKT 314
>sp|P26797|HM19_CAEEL Homeobox protein ceh-19 OS=Caenorhabditis elegans GN=ceh-19 PE=2
SV=2
Length = 199
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 44/56 (78%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 97
P A++ QL LE +F+T +YLSV +R+ L+ +L+LTETQ+K WFQNRRTKWKKQ
Sbjct: 97 PRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWKKQ 152
>sp|Q2VL76|MSX1_PROCO Homeobox protein MSX-1 OS=Propithecus coquereli GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|Q2VL78|MSX1_LEMCA Homeobox protein MSX-1 OS=Lemur catta GN=MSX1 PE=3 SV=1
Length = 297
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|P13297|MSX1_MOUSE Homeobox protein MSX-1 OS=Mus musculus GN=Msx1 PE=1 SV=3
Length = 297
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|O02786|MSX1_BOVIN Homeobox protein MSX-1 OS=Bos taurus GN=MSX1 PE=2 SV=1
Length = 297
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 169 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 223
>sp|O70218|HMX1_MOUSE Homeobox protein HMX1 OS=Mus musculus GN=Hmx1 PE=2 SV=1
Length = 332
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 38/54 (70%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 97
+ F+ Q+ LE+ F RYLS ER LA SL LTETQVKIWFQNRR KWK+Q
Sbjct: 196 TVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQVKIWFQNRRNKWKRQ 249
>sp|Q22910|HM31_CAEEL Homeobox protein ceh-31 OS=Caenorhabditis elegans GN=ceh-31 PE=4
SV=2
Length = 260
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 46 FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-NPGMDV 103
FT +QL LEN F+ +YLSV +R+ LA + LT+TQVK W+QNRRTKWK+Q + GMD+
Sbjct: 101 FTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQASVGMDL 159
>sp|Q03372|HMSH_DROME Muscle segmentation homeobox OS=Drosophila melanogaster GN=Dr PE=2
SV=2
Length = 515
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT +QL++LE KF+ +YLS+ ER + SL LTETQVKIWFQNRR K K+
Sbjct: 424 PRTPFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKR 478
>sp|P82976|GBX1_MOUSE Homeobox protein GBX-1 OS=Mus musculus GN=Gbx1 PE=2 SV=2
Length = 418
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG 100
+AFT EQL+ LE +F +YLS+ ER +A +L L+E QVKIWFQNRR KWK+ G
Sbjct: 321 TAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAG 377
>sp|Q9GK08|MSX2_CANFA Homeobox protein MSX-2 OS=Canis familiaris GN=MSX2 PE=2 SV=1
Length = 267
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SL+LTETQVKIWFQNRR K K+
Sbjct: 145 PRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKR 199
>sp|Q9DE09|HMX1_CHICK Homeobox protein HMX1 OS=Gallus gallus GN=HMX1 PE=2 SV=1
Length = 333
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 24 RRNRGRSPNTQTPSEDLVPESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQV 83
+R GR T+T F+ Q+ LE+ F RYLS ER LA SL LTETQV
Sbjct: 195 QRAAGRKKKTRT---------VFSRSQVFQLESTFDVKRYLSSSERAGLAASLHLTETQV 245
Query: 84 KIWFQNRRTKWKKQ 97
KIWFQNRR KWK+Q
Sbjct: 246 KIWFQNRRNKWKRQ 259
>sp|O42230|GBX2_CHICK Homeobox protein GBX-2 OS=Gallus gallus GN=GBX2 PE=2 SV=1
Length = 340
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG 100
+AFT EQL+ LE +F +YLS+ ER +A +L L+E QVKIWFQNRR KWK+ G
Sbjct: 244 TAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAG 300
>sp|Q26656|HMX_STRPU Homeobox protein Hmx (Fragment) OS=Strongylocentrotus purpuratus
GN=HMX PE=2 SV=1
Length = 405
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 39/54 (72%)
Query: 44 SAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 97
+ F+ Q+ LE+ F+ RYLS ER LA +L LTETQVKIWFQNRR KWK+Q
Sbjct: 258 TVFSRSQVFQLESTFEVKRYLSSSERAGLAANLHLTETQVKIWFQNRRNKWKRQ 311
>sp|P28361|MSX1_CHICK Homeobox protein MSX-1 OS=Gallus gallus GN=MSX1 PE=2 SV=1
Length = 249
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 42 PESAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 96
P + FT QL+ALE KF+ +YLS+ ER + SLSLTETQVKIWFQNRR K K+
Sbjct: 125 PRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 179
>sp|Q3UHX8|NKX63_MOUSE Homeobox protein Nkx-6.3 OS=Mus musculus GN=Nkx6-3 PE=2 SV=1
Length = 262
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 46 FTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNS 105
FT Q+ ALE F+ T+YL+ ER LA SL +TE+QVK+WFQNRRTKW+K++ ++ +S
Sbjct: 147 FTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKS-ALEPSS 205
Query: 106 PTVPTCPGGS 115
T P PGG+
Sbjct: 206 ST-PRAPGGA 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.126 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,396,378
Number of Sequences: 539616
Number of extensions: 2850556
Number of successful extensions: 9623
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 8018
Number of HSP's gapped (non-prelim): 1659
length of query: 165
length of database: 191,569,459
effective HSP length: 109
effective length of query: 56
effective length of database: 132,751,315
effective search space: 7434073640
effective search space used: 7434073640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)