RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15107
(135 letters)
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 77
Score = 69.1 bits (169), Expect = 2e-17
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 61 PSGNHRKQRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+ R R++R +T+ Q LE F Y R EVA +NL E +V+
Sbjct: 6 NWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVK 58
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 66.4 bits (162), Expect = 3e-16
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+R RT+FT+ Q++ LE F +T YPD+F RE +A KI+LPE+R+Q
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 46
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 65
Score = 65.3 bits (159), Expect = 6e-16
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 67 KQRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
KQRR RTTF+ +QLD LE F +T+YPDI+ REE+A + NL E+R+Q
Sbjct: 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQ 47
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens)
[TaxId: 9606]}
Length = 57
Score = 63.7 bits (155), Expect = 2e-15
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+ + F+ Q LE F +Y R+ +A + L E +V+
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVK 45
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 66
Score = 62.6 bits (152), Expect = 7e-15
Identities = 12/47 (25%), Positives = 19/47 (40%)
Query: 67 KQRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
K R RT QL L + + PD M+E++ L ++
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIR 48
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 88
Score = 61.6 bits (149), Expect = 2e-14
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 54 HSSLGYIPSGNHRKQRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+ RT FT QL LE F +Y R E+A + L E++V+
Sbjct: 13 PPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVK 72
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 60.7 bits (147), Expect = 3e-14
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
R++R +++ QL LE + ++ R +++ +L E ++
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQIT 46
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 60.6 bits (147), Expect = 3e-14
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 72 RTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
R T+TR Q LE F RY R E+A ++L E +++
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIK 42
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 60.4 bits (146), Expect = 4e-14
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 68 QRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
QRR+RT FT QL LE+ F + RYPD+ REE+A+ NL E+RV+
Sbjct: 1 QRRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVR 46
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 50
Score = 59.5 bits (144), Expect = 6e-14
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 72 RTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
R FT Q L ++F + + P ++ ++ ++ L S V
Sbjct: 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVS 43
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster
[TaxId: 7227]}
Length = 53
Score = 58.7 bits (142), Expect = 2e-13
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 70 RERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
R RT F+ QL L+ F + RY R++++ ++ L E++++
Sbjct: 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIK 44
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1
(Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 59.3 bits (143), Expect = 2e-13
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
R R T+ + L V+ES F + +YPD REE+A N +
Sbjct: 1 RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPG 45
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 58
Score = 58.4 bits (141), Expect = 3e-13
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
R+ RT FT AQL LE F + +Y I R E + ++L E++V+
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVK 45
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 58
Score = 57.6 bits (139), Expect = 5e-13
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 70 RERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+ RTT + A D LE FG+ P +A ++NL + V+
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVR 44
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 57.7 bits (139), Expect = 5e-13
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 66 RKQRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+ ++R+RT+ LE++F K P + +A ++ L + V+
Sbjct: 6 QARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVR 53
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 57
Score = 56.8 bits (137), Expect = 1e-12
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 70 RERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
R RT FTR QL LE F K Y R E+A ++NLPES ++
Sbjct: 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIK 44
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 56.4 bits (136), Expect = 1e-12
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 72 RTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+++ + LE +F + + + +EEVA K + +V+
Sbjct: 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVR 42
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 67
Score = 56.5 bits (136), Expect = 2e-12
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
RR RTTFT +Q+ LE F + RY +++ K+ L ++V+
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVK 46
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 68
Score = 55.7 bits (134), Expect = 3e-12
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 68 QRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
+R+ R F++AQ+ LE F + +Y RE +A I+L ++V+
Sbjct: 2 RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVK 47
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 55.7 bits (134), Expect = 4e-12
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 69 RRERTTFTRAQLDVLESLF---GKTRYPDIFMREEVALKINLPESRVQ 113
RR+R F + ++L F YP +EE+A K + S+V
Sbjct: 2 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVS 49
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 55.1 bits (133), Expect = 5e-12
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 69 RRERTTFTRAQLDVLESLFGKTR---YPDIFMREEVALKINLPESRVQ 113
+ +R + +V+ S + YP ++++A + NL +V
Sbjct: 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVN 50
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 55.4 bits (133), Expect = 6e-12
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 62 SGNHRKQRRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
G K+R+ R FT+AQ LE F + RY RE +A I L ++V+
Sbjct: 3 DGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 54
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat
(Rattus rattus) [TaxId: 10117]}
Length = 78
Score = 52.5 bits (125), Expect = 9e-11
Identities = 9/57 (15%), Positives = 20/57 (35%)
Query: 72 RTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQGYPDIFMREEVALKI 128
R + A +L + + + P RE + + N E +G + + +
Sbjct: 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLV 57
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 51.5 bits (123), Expect = 1e-10
Identities = 8/44 (18%), Positives = 19/44 (43%)
Query: 72 RTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQGY 115
RT+ LE F + + P +A ++N+ + ++ +
Sbjct: 2 RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVW 45
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 51.5 bits (123), Expect = 2e-10
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 55 SSLGYIPSGNHRKQRRERTTFTRAQLDVLESLFGK----TRYPDIFMREEVALKINLPES 110
S G PS + +R RT FT Q + + + + + D E+ + +
Sbjct: 4 GSSGSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQ 63
Query: 111 RVQ 113
++
Sbjct: 64 VLK 66
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 50.9 bits (122), Expect = 2e-10
Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 70 RERTTFTRAQLDVLESLFGK-TRYPDIFMREEVALKINLPESRVQ 113
++ D LE +F T+YPD + ++ +++ ++Q
Sbjct: 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKIQ 47
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 72
Score = 50.4 bits (120), Expect = 4e-10
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 69 RRERTTFTRAQLDVLESLFGKT-RYPDIFMREEVALKINLPESRVQ 113
T T Q+++LE F K ++PD +A + L E + Q
Sbjct: 2 SEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQ 47
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 48.9 bits (117), Expect = 8e-10
Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 76 TRAQLDVLESLFGK-TRYPDIFMREEVALKINLPESRVQ 113
T +LE +F T++PD E ++ +++ +Q
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQ 39
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 47.9 bits (114), Expect = 3e-09
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 69 RRERTTFTRAQLDVLESLFGKTR---YPDIFMREEVALKINLPESRVQ 113
R R FT+ + +LES F K Y D E + +L +++
Sbjct: 1 RGHR--FTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIK 46
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 47.4 bits (112), Expect = 6e-09
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 67 KQRRERTTFTRAQLDVLESLFGKT-RYPDIFMREEVALKINLPESRVQ 113
R RT + L +L+S YPD ++ +++LP+ +
Sbjct: 6 SGPRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTII 53
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 42.4 bits (99), Expect = 6e-07
Identities = 7/45 (15%), Positives = 15/45 (33%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQ 113
++ T QL VL++ F + + + L +
Sbjct: 5 PQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREID 49
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 37.0 bits (85), Expect = 7e-05
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 69 RRERTTFTRAQLDVLESLFGKTRYPDIFMREEVALKINLPESRVQGY 115
T+ QL +L+S F + ++ +++ LP + +
Sbjct: 4 GSSGKRKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQW 50
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 318
Score = 26.8 bits (58), Expect = 0.97
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 99 EEVALKINLPESRVQGYPDIFMREEVALK 127
++VALK L E+ +G+P +RE L+
Sbjct: 36 QKVALKKVLMENEKEGFPITALREIKILQ 64
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 298
Score = 25.6 bits (55), Expect = 2.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 99 EEVALKINLPESRVQGYPDIFMREEVALK 127
E VALK ++ +G P +RE LK
Sbjct: 28 EVVALKKIRLDTETEGVPSTAIREISLLK 56
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 25.1 bits (54), Expect = 2.8
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 89 KTRYPDIFMREE--VALKINLPESRVQGYPDIF 119
R+ DI R + V +N + +Q
Sbjct: 41 LNRFRDIQCRRQTAVRADLN--ANYIQVGNTRT 71
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 355
Score = 24.9 bits (53), Expect = 4.1
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 94 DIFMREEVALKINLPESRVQGYPDIFMREEVALK 127
D + VA+K + Q + RE V +K
Sbjct: 38 DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK 71
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium
falciparum) [TaxId: 5833]}
Length = 286
Score = 24.5 bits (52), Expect = 5.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 99 EEVALKINLPESRVQGYPDIFMREEVALK 127
E ALK E +G P +RE LK
Sbjct: 27 ETFALKKIRLEKEDEGIPSTTIREISILK 55
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 292
Score = 24.5 bits (52), Expect = 5.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 99 EEVALKINLPESRVQGYPDIFMREEVALK 127
E VALK + +G P +RE LK
Sbjct: 28 EIVALKRVRLDDDDEGVPSSALREICLLK 56
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 23.9 bits (51), Expect = 7.3
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 87 FG---KTRYPDIFMREEVALKINLPESRVQGYPDIFMREEVALK 127
FG K Y + + VA+KI E+ D + E ++
Sbjct: 20 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 63
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 305
Score = 24.1 bits (51), Expect = 8.2
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 99 EEVALKINLPESRVQGYPDIFMREEVALKI 128
VALK ++ +G P +RE L+
Sbjct: 34 RFVALKRVRVQTGEEGMPLSTIREVAVLRH 63
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.400
Gapped
Lambda K H
0.267 0.0654 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 499,750
Number of extensions: 21079
Number of successful extensions: 116
Number of sequences better than 10.0: 1
Number of HSP's gapped: 111
Number of HSP's successfully gapped: 42
Length of query: 135
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 59
Effective length of database: 1,364,116
Effective search space: 80482844
Effective search space used: 80482844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.4 bits)