BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15108
(223 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 104 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 158
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SD++++
Sbjct: 159 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 218
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P RPT
Sbjct: 219 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 277
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 278 FLEIVNLLKD 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SD++++
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 279 FLEIVNLLKD 288
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+++AAR
Sbjct: 106 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAAR 160
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SD++++
Sbjct: 161 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 220
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P+ RPT
Sbjct: 221 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPT 279
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 280 FLEIVNLLKD 289
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D Y+ YY K +LP+RW+ E++ D F+T SD++++
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 279 FLEIVNLLKD 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+++AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAAR 159
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SD++++
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P+ RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPT 278
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 279 FLEIVNLLKD 288
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 102 RGDLKSYLRSLRPAMANNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 156
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 157 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 216
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 217 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 275
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 276 SFLEIISSIKEEM 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 99 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 153
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 154 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 272
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 273 SFLEIISSIKEEM 285
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 109/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 134 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 188
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 189 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 248
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K P+ + L C +P RP
Sbjct: 249 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRP 307
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 308 SFLEIISSIKEEM 320
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 105 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 159
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 278
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 279 SFLEIISSIKEEM 291
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 105 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 159
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 160 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 220 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 278
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 279 SFLEIISSIKEEM 291
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 112 RGDLKSYLRSLRPAMANNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 166
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 285
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 286 SFLEIISSIKEEM 298
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 106 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 160
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 279
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 280 SFLEIISSIKEEM 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 103 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 157
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 158 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 217
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 218 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 276
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 277 SFLEIISSIKEEM 289
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 110/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 112 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 166
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 227 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 285
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 286 SFLEIISSIKEEM 298
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 109/193 (56%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 99 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 153
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC ++ D +VKI G+++D Y+ +YY K +LP+RW+ E++ D F+T SDV+++
Sbjct: 154 RNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 214 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLLELMRMCWQYNPKMRP 272
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 273 SFLEIISSIKEEM 285
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 217
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + +YY K N LP++W+ EA+FD ++ +SDV+
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 277
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 278 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 336
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 337 RPTFKQLVEDL 347
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 168
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + +YY K N LP++W+ EA+FD ++ +SDV+
Sbjct: 169 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 228
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 229 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 287
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 288 RPTFKQLVEDL 298
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 169
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + +YY K N LP++W+ EA+FD ++ +SDV+
Sbjct: 170 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 229
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 230 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 288
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 289 RPTFKQLVEDL 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 165
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + +YY K N LP++W+ EA+FD ++ +SDV+
Sbjct: 166 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 225
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 226 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 284
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 285 RPTFKQLVEDL 295
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + +YY K N LP++W+ EA+FD ++ +SDV+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 295
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 296 RPTFKQLVEDL 306
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + +YY K N LP++W+ EA+FD ++ +SDV+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 295
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 296 RPTFKQLVEDL 306
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 161
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + +YY K N LP++W+ EA+FD ++ +SDV+
Sbjct: 162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 221
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 222 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 280
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 281 RPTFKQLVEDL 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 162
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 281 RPSFSELVSRIS 292
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 135 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 180
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 181 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 240
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 241 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 298
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 299 RPSFSELVSRIS 310
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 162
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 281 RPSFSELVSRIS 292
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 114 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 159
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 277
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 278 RPSFSELVSRIS 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 109 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 154
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 155 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 214
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 215 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 272
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 273 RPSFSELVSRIS 284
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 136 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 181
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 182 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 241
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 242 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 299
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 300 RPSFSELVSRIS 311
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 116 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 161
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 222 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 279
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 280 RPSFSELVSRIS 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 112 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 157
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 275
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 276 RPSFSELVSRIS 287
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 108/192 (56%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 115 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 160
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KEYY N A LP++W+ E++ +F+TKSDV++
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 221 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 278
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 279 RPSFSELVSRIS 290
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
LS+ V+ AYQVA G+E+++ K+ IH+D+AARN L++ D +KI+ GL++D + +YY
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 114 -KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
K N LP++W+ EA+FD ++ +SDV+++ L+WEIF G P+P + +++ L+
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
K S+ T E + + C H P QRPTF +V L
Sbjct: 267 EGHRMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 306
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL +FL A P L+ SQ + +A Q+A G+ +++ + +H+D+A R
Sbjct: 100 GDLNKFLRAHGPDAVLMAEGNPPT--ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATR 157
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NCL+ +L VKI G+S+D Y +YY+ +LP+RW+P E++ +F+T+SDV++
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG 217
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEIF G+ P+ LS+++V+ + ++ + P+ + L C PH R
Sbjct: 218 VVLWEIFTYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPQEVYELMLGCWQREPHMRKN 276
Query: 206 FPSIVTQLSD 215
I T L +
Sbjct: 277 IKGIHTLLQN 286
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
++ ++ ++QVA G+E +S ++ IH+D+AARN L+S + VKI GL++D Y+ +Y
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ + LPL+W+ E++FD +STKSDV++Y L+WEIF+ G P+P + D+ S+L
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL 315
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
TPE I + C H P +RP F +V +L D +
Sbjct: 316 REGMRMRAPEYSTPE-IYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 98/157 (62%), Gaps = 2/157 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
LS ++ + +A QVA G+ ++S+++ +H+D+A RNCL+ ++ VKI+ GLS++ Y +YY
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 114 KY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
K N +P+RW+P E++F + ++T+SDV+AY ++WEIF+ G P+ ++ ++V+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR 290
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
+ P + +L C P RP+F SI
Sbjct: 291 DGNI-LACPENCPLELYNLMRLCWSKLPADRPSFCSI 326
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D + + K +LP+RW+ E++ D F+T SD++++
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P+ RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPNMRPT 278
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 279 FLEIVNLLKD 288
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 102 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 156
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D + + K +LP+RW+ E++ D F+T SD++++
Sbjct: 157 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 216
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P RPT
Sbjct: 217 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 275
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 276 FLEIVNLLKD 285
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATR--XXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R P LS+ V+ AYQVA G+E+++ K+ IH+D+
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPE-EQLSSKDLVSCAYQVARGMEYLASKKCIHRDL 176
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ D +KI+ GL++D + + K N LP++W+ EA+FD ++ +SDV+
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K S+ T E + + C H P Q
Sbjct: 237 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQ 295
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 296 RPTFKQLVEDL 306
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK +L + R P ++ + + MA ++A G+ +++ K+ +H+D+AAR
Sbjct: 105 GDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAAR 159
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D +VKI G+++D + + K +LP+RW+ E++ D F+T SD++++
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEI + E P+ LS++QVL + PE +T L C +P RPT
Sbjct: 220 VVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL-DQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 206 FPSIVTQLSD 215
F IV L D
Sbjct: 279 FLEIVNLLKD 288
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G+++++ K+ +H+D+AAR
Sbjct: 116 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAAR 161
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KE N A LP++W+ E++ +F+TKSDV++
Sbjct: 162 NCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 221
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 222 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 279
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 280 RPSFSELVSRIS 291
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 97 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 151
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D + + K +LP+RW+ E++ D F+T SDV+++
Sbjct: 152 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 211
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 212 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLLELMRMCWQYNPKMRP 270
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 271 SFLEIISSIKEEM 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G++ ++ K+ +H+D+AAR
Sbjct: 176 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 221
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KE+ N A LP++W+ E++ +F+TKSDV++
Sbjct: 222 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 281
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 282 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 339
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 340 RPSFSELVSRIS 351
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G++ ++ K+ +H+D+AAR
Sbjct: 115 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 160
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KE+ N A LP++W+ E++ +F+TKSDV++
Sbjct: 161 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 220
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 221 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 278
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 279 RPSFSELVSRIS 290
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G++ ++ K+ +H+D+AAR
Sbjct: 118 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 163
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KE+ N A LP++W+ E++ +F+TKSDV++
Sbjct: 164 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 223
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 224 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 281
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 282 RPSFSELVSRIS 293
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G++ ++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 162
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KE+ N A LP++W+ E++ +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 281 RPSFSELVSRIS 292
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G++ ++ K+ +H+D+AAR
Sbjct: 122 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 167
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KE+ N A LP++W+ E++ +F+TKSDV++
Sbjct: 168 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 227
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 228 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 285
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 286 RPSFSELVSRIS 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G++ ++ K+ +H+D+AAR
Sbjct: 117 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 162
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D Y KE+ N A LP++W+ E++ +F+TKSDV++
Sbjct: 163 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 222
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 223 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 280
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 281 RPSFSELVSRIS 292
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
+GDLK +L + R P S S+ + MA ++A G+ +++ + +H+D+AA
Sbjct: 106 RGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAA 160
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNC+++ D +VKI G+++D + + K +LP+RW+ E++ D F+T SDV+++
Sbjct: 161 RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEI E P+ LS++QVL + L K + P+ + L C +P RP
Sbjct: 221 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN-CPDMLFELMRMCWQYNPKMRP 279
Query: 205 TFPSIVTQLSDAM 217
+F I++ + + M
Sbjct: 280 SFLEIISSIKEEM 292
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRL 260
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 305
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 117 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 175
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 176 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 235
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 236 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 294
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 295 RPTFKQLVEDL 305
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 114 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 172
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 173 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 232
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 233 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 291
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 292 RPTFKQLVEDL 302
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 361
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 352
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 354
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 113 bits (282), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 113 bits (282), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 242 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 301
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 302 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 346
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 359
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 201 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 260
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 261 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 305
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 171 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 229
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 230 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 348
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 349 RPTFKQLVEDL 359
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +Y
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 207 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 266
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 311
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 109/191 (57%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + ++I+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 20/192 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL+ F+ P V+ L + QVA G++ ++ K+ +H+D+AAR
Sbjct: 118 GDLRNFI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAAR 163
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN---AILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D KE+ N A LP++W+ E++ +F+TKSDV++
Sbjct: 164 NCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 223
Query: 144 YACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
+ L+WE+ +G P+PD++ D + L+ ++L P Y L KC HP
Sbjct: 224 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML--KCWHPKAEM 281
Query: 203 RPTFPSIVTQLS 214
RP+F +V+++S
Sbjct: 282 RPSFSELVSRIS 293
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 102/175 (58%), Gaps = 10/175 (5%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P R+L+ ++ A+Q++ G++++++ +L+H+D+AARN L++ +KIS GLS+D Y
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 109 QKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
+++ Y K +P++W+ E++FD ++T+SDV+++ L+WEI G P+P + +++
Sbjct: 202 EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Query: 168 LSQLESKKLCWKHSSKTP----EYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
+ L++ H + P E + L +C P +RP F I L M
Sbjct: 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 112 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 170
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
ARN L++ + +KI+ GL++D +YYK N LP++W+ EA+FD ++ +SDV+
Sbjct: 171 TARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 231 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 289
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 290 RPTFKQLVEDL 300
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 3/189 (1%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
GDL +FL+ V+S L V + Q+A G+E++S ++HKD+A
Sbjct: 97 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RN L+ L+VKIS GL ++ Y +YYK N++LP+RW+ EA+ +FS SD+++Y
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 216
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WE+F+ G P+ S+ V+ + ++++ P ++ +L +C + P +RP
Sbjct: 217 GVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL-PCPDDCPAWVYALMIECWNEFPSRRP 275
Query: 205 TFPSIVTQL 213
F I ++L
Sbjct: 276 RFKDIHSRL 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 106/191 (55%), Gaps = 7/191 (3%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
GDL +FL+ V+S L V + Q+A G+E++S ++HKD+A
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 173
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
RN L+ L+VKIS GL ++ Y +YYK N++LP+RW+ EA+ +FS SD+++Y
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL--CWKHSSKTPEYITSLHEKCIHPHPHQ 202
++WE+F+ G P+ S+ V+ + ++++ C P ++ +L +C + P +
Sbjct: 234 GVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC---PDDCPAWVYALMIECWNEFPSR 290
Query: 203 RPTFPSIVTQL 213
RP F I ++L
Sbjct: 291 RPRFKDIHSRL 301
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 85
GDL +FL A + + L SQ + +A Q+A G+ +++ + +H+D+A
Sbjct: 102 GDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLAT 161
Query: 86 RNCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAY 144
RNCL+ ++L VKI G+S+D Y +YY+ +LP+RW+P E++ +F+T+SDV+++
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
++WEIF G+ P+ LS+ +V+ + ++ + P+ + + C P QR
Sbjct: 222 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVL-ERPRVCPKEVYDVMLGCWQREPQQRL 280
Query: 205 TFPSI 209
I
Sbjct: 281 NIKEI 285
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D Y+ +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 11/192 (5%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL FLLA+R +L V +A G+E++S + IH+D+AAR
Sbjct: 116 GDLHAFLLASRIGENPF---------NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC+++ D++V ++ GLS+ Y +YY+ A LP++WL E++ D+ ++ SDV+A+
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFG 226
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
+WEI +G+ P+ + + ++ + L K + E + L +C P QRP+
Sbjct: 227 VTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL-KQPPECMEEVYDLMYQCWSADPKQRPS 285
Query: 206 FPSIVTQLSDAM 217
F + +L + +
Sbjct: 286 FTCLRMELENIL 297
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL +FL + L Q + +A QVA G+ +++ +H+D+A R
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 187
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NCL+ L VKI G+S+D Y +YY+ +LP+RW+P E++ +F+T+SDV+++
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEIF G+ P+ LS+ + + + + + + PE + ++ C P QR +
Sbjct: 248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPE-VYAIMRGCWQREPQQRHS 306
Query: 206 FPSIVTQL 213
+ +L
Sbjct: 307 IKDVHARL 314
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 101/175 (57%), Gaps = 10/175 (5%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P R+L+ ++ A+Q++ G++++++ +L+H+D+AARN L++ +KIS GLS+D Y
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 109 QKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
+++ K +P++W+ E++FD ++T+SDV+++ L+WEI G P+P + +++
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Query: 168 LSQLESKKLCWKHSSKTP----EYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
+ L++ H + P E + L +C P +RP F I L M
Sbjct: 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL +FL + L Q + +A QVA G+ +++ +H+D+A R
Sbjct: 99 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 158
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NCL+ L VKI G+S+D Y +YY+ +LP+RW+P E++ +F+T+SDV+++
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 218
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEIF G+ P+ LS+ + + + + + + PE + ++ C P QR +
Sbjct: 219 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPE-VYAIMRGCWQREPQQRHS 277
Query: 206 FPSIVTQL 213
+ +L
Sbjct: 278 IKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL +FL + L Q + +A QVA G+ +++ +H+D+A R
Sbjct: 105 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 164
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NCL+ L VKI G+S+D Y +YY+ +LP+RW+P E++ +F+T+SDV+++
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 224
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
++WEIF G+ P+ LS+ + + + + + + PE + ++ C P QR +
Sbjct: 225 VVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPE-VYAIMRGCWQREPQQRHS 283
Query: 206 FPSIVTQL 213
+ +L
Sbjct: 284 IKDVHARL 291
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 133 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 304 RPNFAIILERI 314
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 133 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 304 RPNFAIILERI 314
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 118 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 288
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 289 RPNFAIILERI 299
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 118 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 169
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 170 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 288
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 289 RPNFAIILERI 299
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 110 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 161
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 162 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 221
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 222 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 280
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 281 RPNFAIILERI 291
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 133 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 184
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 185 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 304 RPNFAIILERI 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 119 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 290 RPNFAIILERI 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 125 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 176
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 177 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 237 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 295
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 296 RPNFAIILERI 306
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 135 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 186
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 187 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 246
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 247 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 305
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 306 RPNFAIILERI 316
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 100/175 (57%), Gaps = 10/175 (5%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P R+L+ ++ A+Q++ G++++++ L+H+D+AARN L++ +KIS GLS+D Y
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 109 QKE-YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
+++ K +P++W+ E++FD ++T+SDV+++ L+WEI G P+P + +++
Sbjct: 202 EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Query: 168 LSQLESKKLCWKHSSKTP----EYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
+ L++ H + P E + L +C P +RP F I L M
Sbjct: 262 FNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 159 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 210
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 271 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 329
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 330 RPNFAIILERI 340
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 136 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 187
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 188 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 247
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 248 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 306
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 307 RPNFAIILERI 317
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 119 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 290 RPNFAIILERI 300
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 145 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 196
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 197 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 256
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 257 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 315
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 316 RPNFAIILERI 326
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D + +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDLK FL TR + SL+ + +A +A G +++ + IH+DIAAR
Sbjct: 119 GDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAAR 170
Query: 87 NCLISS---DLSVKISLSGLSKDTYQKEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVY 142
NCL++ KI G+++D Y+ YY+ A+LP++W+P EA + F++K+D +
Sbjct: 171 NCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF+ G MP+P S+ +VL + S P + + +C P
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPED 289
Query: 203 RPTFPSIVTQL 213
RP F I+ ++
Sbjct: 290 RPNFAIILERI 300
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D + +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D + +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 255
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEXSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D + K N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 26 KGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 83
KG+L+++L A R RV ++ V+ YQ+A G+E+++ ++ IH+D+
Sbjct: 125 KGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 183
Query: 84 AARNCLISSDLSVKISLSGLSKDTYQKEYYK-YRNAILPLRWLPYEAVFDDEFSTKSDVY 142
AARN L++ + +KI+ GL++D + K N LP++W+ EA+FD ++ +SDV+
Sbjct: 184 AARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 243
Query: 143 AYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQ 202
++ L+WEIF G P+P + +++ L+ K ++ T E + + C H P Q
Sbjct: 244 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRD-CWHAVPSQ 302
Query: 203 RPTFPSIVTQL 213
RPTF +V L
Sbjct: 303 RPTFKQLVEDL 313
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D + +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EY 112
L+ + ++QVA G+E ++ ++ IH+D+AARN L+S VKI GL++D + +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS-DDQVLSQL 171
+ +A LPL+W+ E +FD ++ +SDV+++ L+WEIF+ G P+P + D++ +L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ TPE ++ + C H P QRPTF +V L + +
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLD-CWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
T Q + M V +E++ K+ +H+D+AARNCL++ VK+S GLS+ EY
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
R + P+RW P E + +FS+KSD++A+ L+WEI++ G+MP+ ++ + + +
Sbjct: 162 SSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 220
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ L E + ++ C H +RPTF +++ + D M
Sbjct: 221 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 108/200 (54%), Gaps = 21/200 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL QF+ + + R+ + ++ QVA G+E++++++ +H+D+AAR
Sbjct: 108 GDLLQFIRSPQ--------------RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAAR 153
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYY---KYRNAILPLRWLPYEAVFDDEFSTKSDVYA 143
NC++ +VK++ GL++D +EYY ++R+A LP++W E++ F+TKSDV++
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 144 YACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
+ L+WE+ +G P+ + D L+ ++ P+ + + ++C P R
Sbjct: 214 FGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVR 272
Query: 204 PTFPSIVT---QLSDAMCND 220
PTF +V Q+ A+ D
Sbjct: 273 PTFRVLVGEVEQIVSALLGD 292
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 19/192 (9%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
GDL +LL +R P+ L T + +ALG+E++S++ +H+D+AAR
Sbjct: 126 GDLHTYLLYSRLETG-------PKHIPLQT--LLKFMVDIALGMEYLSNRNFLHRDLAAR 176
Query: 87 NCLISSDLSVKISLSGLSKDTYQKEYYKY-RNAILPLRWLPYEAVFDDEFSTKSDVYAYA 145
NC++ D++V ++ GLSK Y +YY+ R A +P++W+ E++ D +++KSDV+A+
Sbjct: 177 NCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFG 236
Query: 146 CLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPE-YITSLHE---KCIHPHPH 201
+WEI +G P+P + + ++ L H K PE + L+E C P
Sbjct: 237 VTMWEIATRGMTPYPGVQNHEMYDY-----LLHGHRLKQPEDCLDELYEIMYSCWRTDPL 291
Query: 202 QRPTFPSIVTQL 213
RPTF + QL
Sbjct: 292 DRPTFSVLRLQL 303
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
T Q + M V +E++ K+ +H+D+AARNCL++ VK+S GLS+ EY
Sbjct: 102 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P+RW P E + +FS+KSD++A+ L+WEI++ G+MP+ ++ + + +
Sbjct: 162 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 220
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ L E + ++ C H +RPTF +++ + D M
Sbjct: 221 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 109 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 228
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 229 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 132 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 191
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 192 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 251
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 252 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 295
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 106 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 165
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 166 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 225
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 226 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 269
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 223
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 224 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
T Q + M V +E++ K+ +H+D+AARNCL++ VK+S GLS+ EY
Sbjct: 101 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P+RW P E + +FS+KSD++A+ L+WEI++ G+MP+ ++ + + +
Sbjct: 161 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 219
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ L E + ++ C H +RPTF +++ + D M
Sbjct: 220 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 263
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
T Q + M V +E++ K+ +H+D+AARNCL++ VK+S GLS+ EY
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P+RW P E + +FS+KSD++A+ L+WEI++ G+MP+ ++ + + +
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 235
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ L E + ++ C H +RPTF +++ + D M
Sbjct: 236 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
T Q + M V +E++ K+ +H+D+AARNCL++ VK+S GLS+ EY
Sbjct: 97 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P+RW P E + +FS+KSD++A+ L+WEI++ G+MP+ ++ + + +
Sbjct: 157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 215
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ L E + ++ C H +RPTF +++ + D M
Sbjct: 216 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 259
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 107 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 166
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 167 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 226
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 227 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 270
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 163
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 223
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
++E+ + P + SL KC P +RP F + QLS +
Sbjct: 224 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
T Q + M V +E++ K+ +H+D+AARNCL++ VK+S GLS+ EY
Sbjct: 108 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P+RW P E + +FS+KSD++A+ L+WEI++ G+MP+ ++ + + +
Sbjct: 168 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 226
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ L E + ++ C H +RPTF +++ + D M
Sbjct: 227 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 270
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 101 RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 220
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 221 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L+ + AYQVA G+E + K +H+D+AARN L++ VKI GL++D Y
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 114 KYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
R NA LP++W+ E++F+ ++ KSDV++Y L+WEIF+ G P+P + D +L
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI 288
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVT----QLSDA 216
E I + + C +RP+FP++ + QL+DA
Sbjct: 289 QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+LST + + QVA G+ ++ K IH+D+AARN L+++ KI GL++D
Sbjct: 160 TLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 113 YKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + NA LP++W+ E++FD ++ +SDV++Y L+WEIF+ G P+P + + +L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
+ P+ I S+ + C P RPTF I + L + D
Sbjct: 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 604 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+S+ VK+ GLS+
Sbjct: 104 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 163
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 223
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 224 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ ST + + QVA G+ ++ K IH+D+AARN L+++ KI GL++D
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 113 YKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + NA LP++W+ E++FD ++ +SDV++Y L+WEIF+ G P+P + + +L
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
+ P+ I S+ + C P RPTF I + L + D
Sbjct: 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
LS+ + + QVA G+ ++ K IH+D+AARN L+++ KI GL++D Y
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 114 KYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
+ NA LP++W+ E++FD ++ +SDV++Y L+WEIF+ G P+P + + +L
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 282
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
+ P+ I S+ + C P RPTF I + L + D
Sbjct: 283 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 330
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R SL + + AYQ++ L ++ KR +H+DIAARN L+S+ VK+ GLS+
Sbjct: 484 RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
++E+ + P + SL KC P +RP F + QLS
Sbjct: 604 RIENGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R L + + QVA G+ ++ K IH+D+AARN L+++ KI GL++D
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 112 YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
Y + NA LP++W+ E++FD ++ +SDV++Y L+WEIF+ G P+P + + +
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 272
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
L + P+ I S+ + C P RPTF I + L + D
Sbjct: 273 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 322
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 1/158 (0%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ +S + MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+
Sbjct: 106 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W E++ ++FS KSDV+A+ L+WEI G P+P + QV L
Sbjct: 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
E K + PE + L C +P RP+F I
Sbjct: 226 E-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 236
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R L + + QVA G+ ++ K IH+D+AARN L+++ KI GL++D
Sbjct: 155 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 112 YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
Y + NA LP++W+ E++FD ++ +SDV++Y L+WEIF+ G P+P + + +
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 274
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
L + P+ I S+ + C P RPTF I + L + D
Sbjct: 275 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 324
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 129 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 247
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 248 EGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 234
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 238
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R L + + QVA G+ ++ K IH+D+AARN L+++ KI GL++D
Sbjct: 147 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 112 YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
Y + NA LP++W+ E++FD ++ +SDV++Y L+WEIF+ G P+P + + +
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 266
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
L + P+ I S+ + C P RPTF I + L + D
Sbjct: 267 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 316
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
T Q + M V +E++ K+ +H+D+AARNCL++ VK+S GLS+ E
Sbjct: 117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P+RW P E + +FS+KSD++A+ L+WEI++ G+MP+ ++ + + +
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-A 235
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ L E + ++ C H +RPTF +++ + D M
Sbjct: 236 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 236
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ + + A P
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFP 173
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP 232
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L SQ + M Y V G+ + + IH+D+AARNCL+ DL VK+S G+++ +
Sbjct: 99 KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y P++W E ++S+KSDV+A+ L+WE+F+ G+MP+ ++ +V+ ++
Sbjct: 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
Query: 172 -ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+ +L H + + I + C H P +RPTF +++ +
Sbjct: 219 SQGHRLYRPHLAS--DTIYQIMYSCWHELPEKRPTFQQLLSSI 259
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+++AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 441
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+++AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 320 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 438
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 439 EGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+++AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 362 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 480
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 481 EGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y A P
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 235
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y A P
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 236
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ + A P
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP 232
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ + A P
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 173
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP 232
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 96 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 155
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
EY A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 156 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 216 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 261
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
EY A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 167 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 227 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 106 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 165
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
EY A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 166 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 226 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
EY A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 111 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
EY A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 171 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 231 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 276
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ + A P
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 239
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+AA N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ + A P
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ ++FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP 235
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSI 209
PE + L C +P RP+F I
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
SL + + AYQ++ L ++ KR +H+DIAARN L+SS+ VK+ GLS+
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTX 166
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
K LP++W+ E++ F++ SDV+ + +WEI G PF + ++ V+ ++E
Sbjct: 167 XKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 226
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
+ + P + SL KC P +RP F + QLS
Sbjct: 227 NGERL-PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+++ A N L+S LS KI+ GL++
Sbjct: 97 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIE 156
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
EY A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 157 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 217 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 102 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 161
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 162 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 221
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 222 ERGYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
+ +YQVA G+ ++ K IH+D+AARN L++ KI GL++D Y + NA
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
LP++W+ E++F+ ++ +SDV++Y +WE+F+ G P+P + D ++ +
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 284
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
P + + + C P +RPTF IV + + N
Sbjct: 285 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 327
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
+ +YQVA G+ ++ K IH+D+AARN L++ KI GL++D Y + NA
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
LP++W+ E++F+ ++ +SDV++Y +WE+F+ G P+P + D ++ +
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
P + + + C P +RPTF IV + + N
Sbjct: 269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
+ +YQVA G+ ++ K IH+D+AARN L++ KI GL++D Y + NA
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
LP++W+ E++F+ ++ +SDV++Y +WE+F+ G P+P + D ++ +
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 286
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
P + + + C P +RPTF IV + + N
Sbjct: 287 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 329
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
+ +YQVA G+ ++ K IH+D+AARN L++ KI GL++D Y + NA
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
LP++W+ E++F+ ++ +SDV++Y +WE+F+ G P+P + D ++ +
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
P + + + C P +RPTF IV + + N
Sbjct: 292 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ EY
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+E
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ C + PE + L +C P +RPTF + L D
Sbjct: 397 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 98 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 158 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 217
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 218 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ + Q+A G+ I + IH+D+ A N L+S+ L KI+ GL++ EY A
Sbjct: 114 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 173
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W EA+ F+ KSDV+++ L+ EI G +P+P +S+ +V+ LE +
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP 232
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
PE + ++ +C P +RPTF I + L D
Sbjct: 233 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ EY
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+E
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ C + PE + L +C P +RPTF + L D
Sbjct: 397 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQ 109
+ Q V M +A G+++++D +H+D+AARN L++S+L K+S GLS+ DT
Sbjct: 132 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 191
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
Y +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ D+++ V++
Sbjct: 192 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 251
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
+E + P + L C + RP F IV L D M + NS
Sbjct: 252 AIE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL-DKMIRNPNS 303
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ + Q+A G+ I + IH+D+ A N L+S+ L KI+ GL++ EY A
Sbjct: 287 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK 346
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W EA+ F+ KSDV+++ L+ EI G +P+P +S+ +V+ LE +
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP 405
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
PE + ++ +C P +RPTF I + L D
Sbjct: 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
MA Q++ +E++ K IH+D+AARNCL+ + VK++ GLS+ Y + A P
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFP 194
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
++W E++ + FS KSDV+A+ L+WEI G P+P + QV LE K +
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLE-KGYRMEQP 253
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTF 206
P + L C P RP+F
Sbjct: 254 EGCPPKVYELMRACWKWSPADRPSF 278
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+LS+ Q + A VA G++++S K+ IH+D+AARN L+ + KI+ GLS+ Q+ Y
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG--QEVY 195
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
K LP+RW+ E++ ++T SDV++Y L+WEI + G P+ ++ ++ +L
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
K + E + L +C P++RP+F I+ L+
Sbjct: 256 QGYRLEKPLNCDDE-VYDLMRQCWREKPYERPSFAQILVSLN 296
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+LS+ Q + A VA G++++S K+ IH+D+AARN L+ + KI+ GLS+ Q+ Y
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG--QEVY 185
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
K LP+RW+ E++ ++T SDV++Y L+WEI + G P+ ++ ++ +L
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 245
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
K + E + L +C P++RP+F I+ L+
Sbjct: 246 QGYRLEKPLNCDDE-VYDLMRQCWREKPYERPSFAQILVSLN 286
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 102 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 161
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 162 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 222 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 267
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ EY
Sbjct: 360 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+E
Sbjct: 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
Query: 174 --KKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQLSD 215
+ C PE SLH+ +C P +RPTF + L D
Sbjct: 480 GYRMPC------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ EY
Sbjct: 277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+E
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ C + PE + L +C P +RPTF + L D
Sbjct: 397 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 100 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 159
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 160 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 219
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 220 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 110 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 169
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 170 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 230 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 275
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 161 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 103 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 162
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 163 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 223 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 268
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 161 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 109 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 168
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 169 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 229 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 167 DNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 227 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 272
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V M+ Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 106 KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 166 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 226 ERGYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL + EY
Sbjct: 278 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT 337
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+E
Sbjct: 338 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ C + PE + L +C P +RPTF + L D
Sbjct: 398 GYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P L+ ++ + MA Q+A G+ I ++ IH+D+ A N L+S LS KI+ GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
E A P++W EA+ F+ KSDV+++ L+ EI G +P+P +++ +V+
Sbjct: 161 DAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
LE + PE + L C P RPTF + + L D
Sbjct: 221 QNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 19/171 (11%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
RV++L + M A G+E++ K IH+D+AARNCL++ +KIS G+S++
Sbjct: 211 RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
Query: 110 KEYYKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
Y +P++W EA+ +S++SDV+++ L+WE F+ G P+P+LS+ Q
Sbjct: 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR 325
Query: 169 ------SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+L +LC P+ + L E+C P QRP+F +I +L
Sbjct: 326 EFVEKGGRLPCPELC-------PDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYY 113
Q V M +A G+ ++++ +H+D+AARN L++S+L K+S GLS+ ++ Y
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYT 176
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+P+RW EA+ +F++ SD ++Y ++WE+ + GE P+ D+S+ V++ +E
Sbjct: 177 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 236
Query: 174 KKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQLSDAMCN 219
P+ TSLH+ C + RP FP +V+ L + N
Sbjct: 237 D----YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 281
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 9/168 (5%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R+L V MA QVA G+ +I IH+D+ + N L+ + L KI+ GL++ E
Sbjct: 100 RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNE 159
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P +++ +VL Q+
Sbjct: 160 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
Query: 172 ESKKLCWKHSSKTPEYI-TSLHEKCIH---PHPHQRPTFPSIVTQLSD 215
E + P+ SLHE IH P +RPTF + + L D
Sbjct: 220 ER-----GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+LS+ Q + A VA G++++S K+ IH+++AARN L+ + KI+ GLS+ Q+ Y
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG--QEVY 192
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
K LP+RW+ E++ ++T SDV++Y L+WEI + G P+ ++ ++ +L
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 252
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
K + E + L +C P++RP+F I+ L+
Sbjct: 253 QGYRLEKPLNCDDE-VYDLMRQCWREKPYERPSFAQILVSLN 293
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V M+ Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 106 KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
+ + A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 166 WTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 225
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 226 ERGYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 5/164 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 101 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+E
Sbjct: 161 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
Query: 174 --KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ C + PE + L +C P +RPTF + L D
Sbjct: 221 GYRMPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 1/163 (0%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR-NAI 119
+ +YQVA G+ ++ K IH+D+AARN L++ KI GL++ Y + NA
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
LP++W+ E++F+ ++ +SDV++Y +WE+F+ G P+P + D ++ +
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 291
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
P + + + C P +RPTF IV + + N
Sbjct: 292 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 6/170 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYY 113
Q V M +A G+++++D +H+ +AARN L++S+L K+S GLS+ DT Y
Sbjct: 110 QLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT 169
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ D+++ V++ +E
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE- 228
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
+ P + L C + RP F IV L D M + NS
Sbjct: 229 QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL-DKMIRNPNS 277
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L Q V MA Q+A G+ ++ +H+D+ A N L+ +L K++ GL++ E
Sbjct: 109 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
+ A P++W EA F+ KSDV+++ L+ E+ KG +P+P + + +VL Q+
Sbjct: 169 XTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 228
Query: 172 ES--KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
E + C + PE + L +C P +RPTF + L D
Sbjct: 229 ERGYRMPC---PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 239 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 92/173 (53%), Gaps = 23/173 (13%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---D 106
RV++L + M A G+E++ K IH+D+AARNCL++ +KIS G+S+ D
Sbjct: 211 RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265
Query: 107 TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
R +P++W EA+ +S++SDV+++ L+WE F+ G P+P+LS+ Q
Sbjct: 266 GVXAASGGLRQ--VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
Query: 167 VL------SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+L +LC P+ + L E+C P QRP+F +I +L
Sbjct: 324 TREFVEKGGRLPCPELC-------PDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 238
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 239 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 255
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 256 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 4/172 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
+ Q V M + G++++SD +H+D+AARN L++S+L K+S G+S+ + +
Sbjct: 128 FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 187
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ D+S+ V+ +
Sbjct: 188 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
E + P + L C RP F IV L D + + NS
Sbjct: 248 E-EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML-DKLIRNPNS 297
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
+ Q V M ++ G++++SD +H+D+AARN LI+S+L K+S GLS+ + +
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 180
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++++ V+ +
Sbjct: 181 AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
E P + L C + RP F IV L + N
Sbjct: 241 EEGYRL-PSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
+ Q V M +A G+ +++D +H+D+AARN L++S+L K+S GLS+ + +
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA 201
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ D+S+ V+ +
Sbjct: 202 VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
E P + L C +RP F IV L D M + NS
Sbjct: 262 EEGYRL-PAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL-DKMIRNPNS 311
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 146 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 265
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 266 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GLS+ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
+ Q V M + G++++SD +H+D+AARN L++S+L K+S G+S+ + +
Sbjct: 107 FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 166
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ D+S+ V+ +
Sbjct: 167 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
E P + L C RP F IV L D + + NS
Sbjct: 227 EEGYRL-PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML-DKLIRNPNS 276
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
+ Q V M + G++++SD +H+D+AARN L++S+L K+S G+S+ + +
Sbjct: 113 FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ D+S+ V+ +
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
E P + L C RP F IV L D + + NS
Sbjct: 233 EEGYRL-PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML-DKLIRNPNS 282
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++ +Y
Sbjct: 109 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 168
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W E +S+KSDV+++ L+WE+F++G++P+ + S+ +V+ + + +K
Sbjct: 169 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 228
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ ++ + C P RP F ++ QL++
Sbjct: 229 PRLAST-HVYQIMNHCWRERPEDRPAFSRLLRQLAE 263
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++ +Y
Sbjct: 106 LGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W E +S+KSDV+++ L+WE+F++G++P+ + S+ +V+ + + +K
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
+ ++ + C P RP F ++ QL+
Sbjct: 226 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLA 259
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++ +Y
Sbjct: 107 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 166
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W E +S+KSDV+++ L+WE+F++G++P+ + S+ +V+ + + +K
Sbjct: 167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 226
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ ++ + C P RP F ++ QL++
Sbjct: 227 PRLAST-HVYQIMNHCWRERPEDRPAFSRLLRQLAE 261
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M V G+ ++SD +H+D+AARN L+ S+L K+S GLS+ + Y
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
+P+RW EA+ FS+ SDV+++ ++WE+ GE P+ ++++ V+S +E +
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EG 270
Query: 176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
P + L C H QRP F IV+ L DA+
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL-DAL 311
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++ +Y
Sbjct: 106 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 165
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W E +S+KSDV+++ L+WE+F++G++P+ + S+ +V+ + + +K
Sbjct: 166 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 225
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ ++ + C P RP F ++ QL++
Sbjct: 226 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLAE 260
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++ +Y
Sbjct: 126 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 185
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W E +S+KSDV+++ L+WE+F++G++P+ + S+ +V+ + + +K
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 245
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ ++ + C P RP F ++ QL++
Sbjct: 246 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLAE 280
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 85/156 (54%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ M V G+ ++ + +IH+D+AARNCL+ + +K+S G+++ +Y
Sbjct: 104 LGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W E +S+KSDV+++ L+WE+F++G++P+ + S+ +V+ + + +K
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 223
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ ++ + C P RP F ++ QL++
Sbjct: 224 PRLAST-HVYQIMNHCWKERPEDRPAFSRLLRQLAE 258
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GL + + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M +A G++++SD +H+D+AARN LI+S+L K+S GL++ + + Y
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-ESK 174
R +P+RW EA+ +F++ SDV++Y ++WE+ + GE P+ ++S+ V+ + E
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY 267
Query: 175 KLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCN 219
+L P + L C + RP F IV+ L + N
Sbjct: 268 RL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYY 113
Q V M +A G+ ++++ +H+D+AARN L++S+L K+S GLS+ ++
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+P+RW EA+ +F++ SD ++Y ++WE+ + GE P+ D+S+ V++ +E
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ 238
Query: 174 KKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQLSDAMCN 219
P+ TSLH+ C + RP FP +V+ L + N
Sbjct: 239 D----YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
SL V + Q+ + ++ +H+DIA RN L++S VK+ GLS+ ++Y
Sbjct: 109 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
YK LP++W+ E++ F+T SDV+ +A +WEI + G+ PF L + V+ LE
Sbjct: 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 228
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
K P + +L +C P RP F +V LSD
Sbjct: 229 KGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
SL V + Q+ + ++ +H+DIA RN L++S VK+ GLS+ ++Y
Sbjct: 121 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
YK LP++W+ E++ F+T SDV+ +A +WEI + G+ PF L + V+ LE
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 240
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
K P + +L +C P RP F +V LSD
Sbjct: 241 KGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
SL V + Q+ + ++ +H+DIA RN L++S VK+ GLS+ ++Y
Sbjct: 105 SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
YK LP++W+ E++ F+T SDV+ +A +WEI + G+ PF L + V+ LE
Sbjct: 165 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE 224
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
K P + +L +C P RP F +V LSD
Sbjct: 225 KGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
S Q V M +A G++++++ +H+D+AARN L++S+L K+S GLS+ + +
Sbjct: 144 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y +P+RW EA+ +F++ SDV+++ ++WE+ GE P+ +LS+ +V+ +
Sbjct: 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+ P I L +C +RP F IV+ L
Sbjct: 264 -NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKY 115
Q V M V G+ ++SD +H+D+AARN L+ S+L K+S GLS+ +
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 116 RNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
+P+RW EA+ FS+ SDV+++ ++WE+ GE P+ ++++ V+S +E +
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EG 270
Query: 176 LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
P + L C H QRP F IV+ L DA+
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL-DAL 311
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 66 VALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWL 125
V +E++ +H+D+AARN L+S D K+S GL+K+ + LP++W
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWT 353
Query: 126 PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTP 185
EA+ + +FSTKSDV+++ L+WEI++ G +P+P + V+ ++E K P
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCP 412
Query: 186 EYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+ + + C H RPTF + QL
Sbjct: 413 PAVYDVMKNCWHLDAATRPTFLQLREQL 440
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 70 LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEA 129
+E++ +H+D+AARN L+S D K+S GL+K+ + LP++W EA
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEA 185
Query: 130 VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYIT 189
+ + +FSTKSDV+++ L+WEI++ G +P+P + V+ ++E K P +
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY 244
Query: 190 SLHEKCIHPHPHQRPTFPSIVTQL 213
+ + C H RP+F + QL
Sbjct: 245 EVMKNCWHLDAAMRPSFLQLREQL 268
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ + Q+A G+ +I K IH+D+ A N L+S L KI+ GL++ EY A
Sbjct: 113 IDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK 172
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W EA+ F+ KSDV+++ L++EI G++P+P ++ V++ L S+
Sbjct: 173 FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL-SQGYRMP 231
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
P+ + + + C +RPTF + + L D
Sbjct: 232 RVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 267
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 66 VALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWL 125
V +E++ +H+D+AARN L+S D K+S GL+K+ + LP++W
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWT 166
Query: 126 PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTP 185
EA+ + +FSTKSDV+++ L+WEI++ G +P+P + V+ ++E K P
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCP 225
Query: 186 EYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+ + + C H RP+F + QL
Sbjct: 226 PAVYEVMKNCWHLDAAMRPSFLQLREQL 253
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 11/156 (7%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ + Q+A G+ I + IH+D+ A N L+S+ L KI+ GL++ A
Sbjct: 281 IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR----------VGAK 330
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W EA+ F+ KSDV+++ L+ EI G +P+P +S+ +V+ LE +
Sbjct: 331 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMP 389
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
PE + ++ +C P +RPTF I + L D
Sbjct: 390 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 425
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 70 LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEA 129
+E++ +H+D+AARN L+S D K+S GL+K+ + LP++W EA
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEA 176
Query: 130 VFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYIT 189
+ + FSTKSDV+++ L+WEI++ G +P+P + V+ ++E K P +
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY 235
Query: 190 SLHEKCIHPHPHQRPTFPSIVTQL 213
+ + C H RP+F + QL
Sbjct: 236 EVMKNCWHLDAAMRPSFLQLREQL 259
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAI 119
+ + Q+A G+ +I K IH+D+ A N L+S L KI+ GL++ EY A
Sbjct: 112 IDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK 171
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
P++W EA+ F+ KS+V+++ L++EI G++P+P ++ V+S L S+
Sbjct: 172 FPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL-SQGYRMP 230
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
P+ + + + C +RPTF + + L D
Sbjct: 231 RMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDD 266
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 166 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + + P + L C RP F ++ +L + + VN
Sbjct: 226 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 102 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 221
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
LE + + P + L C RP F ++ +L + + VN
Sbjct: 222 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 274
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 100 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 160 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + + P + L C RP F ++ +L + + VN
Sbjct: 220 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 271
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 112 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
LE + + P + L C RP F ++ +L + + VN
Sbjct: 232 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 120 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 180 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + + P + L C RP F ++ +L + + VN
Sbjct: 240 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 291
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 122 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + + P + L C RP F ++ +L + + VN
Sbjct: 242 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 122 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 182 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + + P + L C RP F ++ +L + + VN
Sbjct: 242 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 464 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + + P + L C RP F ++ +L + + VN
Sbjct: 584 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 635
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 7/175 (4%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 465 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524
Query: 112 -YYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
YYK + + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 525 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 584
Query: 170 QLE--SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + C + P + L C RP F ++ +L + + VN
Sbjct: 585 MLEKGERMGC---PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 636
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
A QVA G+ ++ KR IH+D+AARN L+++ VKI GL + Q + Y + +
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 186
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
P W E++ FS SD + + +WE+F G+ P+ L+ Q+L +++ +
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
P+ I ++ +C P RPTF ++ L +A D+ +
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
A QVA G+ ++ KR IH+D+AARN L+++ VKI GL + Q + Y + +
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
P W E++ FS SD + + +WE+F G+ P+ L+ Q+L +++ +
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
P+ I ++ +C P RPTF ++ L +A D+ +
Sbjct: 241 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 283
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
A QVA G+ ++ KR IH+D+AARN L+++ VKI GL + Q + Y + +
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
P W E++ FS SD + + +WE+F G+ P+ L+ Q+L +++ +
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCND 220
P+ I ++ +C P RPTF ++ L +A D
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 276
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R + + + +QV++G++++ + +H+D+AARN L+ + KIS GLSK E
Sbjct: 106 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165
Query: 112 --YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
Y + P++W E + +FS+KSDV+++ L+WE F+ G+ P+ + +V +
Sbjct: 166 NXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVN 222
LE + + P + L C RP F ++ +L + + VN
Sbjct: 226 MLEKGERM-GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 60 VTMAYQVALGLEHISDKRL---IHKDIAARNCLI-----SSDLS---VKISLSGLSKDTY 108
V A Q+A G+ ++ D+ + IH+D+ + N LI + DLS +KI+ GL+++ +
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
+ A W+ E + FS SDV++Y L+WE+ GE+PF + V
Sbjct: 168 RTTKMSAAGA---YAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVA 223
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
+ KL S PE L E C +P PH RP+F +I+ QL+
Sbjct: 224 YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
A QVA G+ ++ KR IH+D+AARN L+++ VKI GL + Q + Y + +
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 180
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
P W E++ FS SD + + +WE+F G+ P+ L+ Q+L +++ +
Sbjct: 181 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
P+ I ++ +C P RPTF ++ L +A
Sbjct: 241 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 276
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--YYKYRNAIL 120
A QVA G+ ++ KR IH+D+AARN L+++ VKI GL + Q + Y + +
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
P W E++ FS SD + + +WE+F G+ P+ L+ Q+L +++ +
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
P+ I ++ +C P RPTF ++ L +A
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY--RNAIL 120
A QVA G+ ++ KR IH+D+AARN L+++ VKI GL + Q + + + +
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 186
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
P W E++ FS SD + + +WE+F G+ P+ L+ Q+L +++ +
Sbjct: 187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDVNS 223
P+ I ++ +C P RPTF ++ L +A D+ +
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA 289
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 247 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 277
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 244 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 274
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 193
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 253
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 254 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 284
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 217
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 277
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 278 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 308
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 244
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 245 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 275
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 17/189 (8%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
G L +FL+ R + S + +QV++G++++ +K +H+D+AAR
Sbjct: 94 GPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAAR 139
Query: 87 NCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAY 144
N L+ + KIS GLSK + YY R+A PL+W E + +FS++SDV++Y
Sbjct: 140 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 199
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
+WE + G+ P+ + +V++ +E K + + P + +L C RP
Sbjct: 200 GVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM-ECPPECPPELYALMSDCWIYKWEDRP 258
Query: 205 TFPSIVTQL 213
F ++ ++
Sbjct: 259 DFLTVEQRM 267
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 208
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 268
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 269 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 299
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 247 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 277
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 247 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 277
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 244
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 245 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 275
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 246 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 276
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 189
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 249
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 250 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 280
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 246 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 276
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 177
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 237
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 238 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 268
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 187
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 247
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 248 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 278
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 180
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 181 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 240
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 241 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ GL+K +KEY+ +P+
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA-EGGKVPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 247 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 277
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 2/156 (1%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY--RNAIL 120
A QVA G+ ++ KR IH+D+AARN L+++ VKI GL + Q + + + +
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV 176
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKH 180
P W E++ FS SD + + +WE+F G+ P+ L+ Q+L +++ +
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
Query: 181 SSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDA 216
P+ I ++ +C P RPTF ++ L +A
Sbjct: 237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
L + + Q+A G+ ++ D RL+H+D+AARN L+ S VKI+ GL++ D + E
Sbjct: 116 LGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y+ + P++W+ E++ F+ +SDV++Y +WE+ G P+ + ++ L
Sbjct: 176 YHADGGKV-PIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
E + + T + + + KC RP F +V++ S
Sbjct: 235 EKGERLPQPPICTID-VYMIMVKCWMIDSECRPRFRELVSEFS 276
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ G +K +KEY+ +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 246 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 276
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ G +K +KEY+ +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 246 CTID-VYMIMRKCWMIDADSRPKFRELIIEFS 276
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 27 GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 86
G L +FL+ R + S + +QV++G++++ +K +H+++AAR
Sbjct: 420 GPLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAAR 465
Query: 87 NCLISSDLSVKISLSGLSKDTYQKE-YYKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAY 144
N L+ + KIS GLSK + YY R+A PL+W E + +FS++SDV++Y
Sbjct: 466 NVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSY 525
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
+WE + G+ P+ + +V++ +E K
Sbjct: 526 GVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ G +K +KEY+ +P+
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 250
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 251 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ G +K +KEY+ +P+
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 187
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 247
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 248 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 278
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ G +K +KEY+ +P+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 244 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 4/152 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ D+RL+H+D+AARN L+ + VKI+ G +K +KEY+ +P+
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+W+ E++ ++ +SDV++Y +WE+ G P+ + ++ S LE + +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 183 KTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
T + + + KC RP F ++ + S
Sbjct: 246 CTID-VYMIMVKCWMIDADSRPKFRELIIEFS 276
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ ++RL+H+D+AARN L+ S VKI+ GL++ + +KE Y +P+
Sbjct: 148 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-YNADGGKMPI 206
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
+W+ E + +F+ +SDV++Y IWE+ G P+ + ++ LE
Sbjct: 207 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYKYRNAILPL 122
Q+A G+ ++ ++RL+H+D+AARN L+ S VKI+ GL++ + +KE Y +P+
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-YNADGGKMPI 183
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE-SKKLCWKHS 181
+W+ E + +F+ +SDV++Y IWE+ G P+ + ++ LE ++L
Sbjct: 184 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPI 243
Query: 182 SKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
Y+ + KC RP F + + S
Sbjct: 244 CTIDVYMVMV--KCWMIDADSRPKFKELAAEFS 274
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
L S+ + + Q+ G+E++ +R +H+D+AARN L+ S+ VKI+ GL+K K+Y
Sbjct: 111 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 170
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
Y R P+ W E++ D+ FS +SDV+++ +++E+F +K P +
Sbjct: 171 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGS 230
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
D LS+L + P +HE C P P RP+F ++ QL
Sbjct: 231 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 285
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
L S+ + + Q+ G+E++ +R +H+D+AARN L+ S+ VKI+ GL+K K+Y
Sbjct: 124 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
Y R P+ W E++ D+ FS +SDV+++ +++E+F +K P +
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 243
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
D LS+L + P +HE C P P RP+F ++ QL
Sbjct: 244 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
L S+ + + Q+ G+E++ +R +H+D+AARN L+ S+ VKI+ GL+K K+Y
Sbjct: 112 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 171
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
Y R P+ W E++ D+ FS +SDV+++ +++E+F +K P +
Sbjct: 172 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 231
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
D L +L + P +HE C P P RP+F ++ QL
Sbjct: 232 ERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + D +VKI GL+ + + ++ +
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 183 SGSIL---WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMV 238
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
L K S P+ + L +C+ +RP+FP I+ ++ +
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + D +VKI GL+ + + ++ +
Sbjct: 123 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 183 SGSIL---WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMV 238
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
L K S P+ + L +C+ +RP+FP I+ ++ +
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 90/167 (53%), Gaps = 15/167 (8%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + D +VKI GL S+ + ++ +
Sbjct: 111 IDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL 170
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 171 SGSIL---WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMV 226
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
L K S P+ + L +C+ +RP+FP I+ ++ +
Sbjct: 227 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+++A RN L+ ++ VKI GL+K Q KEYYK + P+
Sbjct: 123 QICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI 182
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 183 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 242
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCND 220
+L P+ I + +C + + +QRP+F + V Q+ D M +
Sbjct: 243 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGE 297
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+ + + ++ +
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 195 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 250
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+ + + ++ +
Sbjct: 127 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 187 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 242
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 243 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 287
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL S+ + ++ +
Sbjct: 135 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 195 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 250
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 251 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 295
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL S+ + ++ +
Sbjct: 134 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 194 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 249
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 250 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 294
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD----TYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL+ + + ++ +
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 166
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 167 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 222
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL S+ + ++ +
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 172 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 227
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL S+ + ++ +
Sbjct: 112 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 172 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 227
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 228 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 272
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL S+ + ++ +
Sbjct: 109 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 168
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 169 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 224
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 225 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL S+ + ++ +
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 167 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 222
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 15/165 (9%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL----SKDTYQKEYYKY 115
+ +A Q A G++++ K +IH+D+ + N + DL+VKI GL S+ + ++ +
Sbjct: 107 IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 116 RNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQL 171
+IL W+ E + + +S +SDVYA+ +++E+ G++P+ ++++ DQ++ +
Sbjct: 167 SGSIL---WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMV 222
Query: 172 ESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
L K S P+ + L +C+ +RP FP I+ +
Sbjct: 223 GRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI 267
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE++K + P+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQKEY 112
L S+ + + Q+ G+E++ +R +H+D+AARN L+ S+ VKI+ GL+K K+
Sbjct: 108 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX 167
Query: 113 YKYRN-AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL------ 162
R P+ W E++ D+ FS +SDV+++ +++E+F +K P +
Sbjct: 168 XVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 227
Query: 163 -SDDQVLSQLESKKLCWKHSSKTPEYITSLHE---KCIHPHPHQRPTFPSIVTQL 213
D L +L + P +HE C P P RP+F ++ QL
Sbjct: 228 ERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 282
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG----LSKDTY 108
+L + Q+A G+ ++ + ++H+++AARN L+ S V+++ G L D
Sbjct: 111 ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
Q Y A P++W+ E++ +++ +SDV++Y +WE+ G P+ L +V
Sbjct: 171 Q---LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 227
Query: 169 SQLE-SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
LE ++L Y+ + KC + RPTF + + +
Sbjct: 228 DLLEKGERLAQPQICTIDVYMVMV--KCWMIDENIRPTFKELANEFT 272
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG----LSKDTY 108
+L + Q+A G+ ++ + ++H+++AARN L+ S V+++ G L D
Sbjct: 129 ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 188
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
Q Y A P++W+ E++ +++ +SDV++Y +WE+ G P+ L +V
Sbjct: 189 Q---LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP 245
Query: 169 SQLE-SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
LE ++L Y+ + KC + RPTF + + +
Sbjct: 246 DLLEKGERLAQPQICTIDVYMVMV--KCWMIDENIRPTFKELANEFT 290
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
L + ++MAY VA G+ ++ ++ ++H+D+ + N L+ +VK+ GLS+
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASX 192
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
+ + A W+ E + D+ + KSDVY++ ++WE+ + P+ +L+ QV++ +
Sbjct: 193 FLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV 251
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
K + + ++ E C P +RP+F +I+ L
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 326
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 19/176 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 186 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 245
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCNDV 221
+L P+ I + +C + + +QRP+F + V Q+ D M V
Sbjct: 246 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAGLV 301
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 129 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 189 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 248
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 249 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 302
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 313
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 185 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 244
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 245 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 180 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 239
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 240 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 187 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 246
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 247 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 300
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 19/174 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 188 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 247
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMCN 219
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 248 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 301
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 15/167 (8%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
Q + +A Q A G++++ K +IH+D+ + N + L+VKI GL+ T + + +
Sbjct: 133 QLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA--TVKSRWSGSQQ 190
Query: 118 AILP---LRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQ 170
P + W+ E + ++ FS +SDVY+Y +++E+ GE+P+ +++ DQ++
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFM 249
Query: 171 L----ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+ S L K P+ + L C+ +RP FP I++ +
Sbjct: 250 VGRGYASPDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSI 295
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
L + ++MAY VA G+ ++ ++ ++H+++ + N L+ +VK+ GLS+
Sbjct: 134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKAST 192
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
+ ++A W+ E + D+ + KSDVY++ ++WE+ + P+ +L+ QV++ +
Sbjct: 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV 251
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
K + + ++ E C P +RP+F +I+ L
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 181 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 240
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAMC 218
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 241 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 19/172 (11%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRN-AILPL 122
Q+ G+E++ KR IH+D+A RN L+ ++ VKI GL+K Q KE K + P+
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMPFPDL-----SDDQV------L 168
W E++ + +FS SDV+++ +++E+F K + P + +D Q L
Sbjct: 200 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 259
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI---VTQLSDAM 217
+L P+ I + +C + + +QRP+F + V Q+ D M
Sbjct: 260 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
PR S+ +Q + A Q+ G+ ++ + IH+++AARN L+ +D VKI GL+K
Sbjct: 110 PR-HSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE---------M 157
+ EYY+ R + P+ W E + + +F SDV+++ ++E+ + +
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
Query: 158 PFPDLSDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
++ Q+ L++L + K P + L + C RPTF +++
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
PR S+ +Q + A Q+ G+ ++ + IH+++AARN L+ +D VKI GL+K
Sbjct: 110 PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE---------M 157
+ EYY+ R + P+ W E + + +F SDV+++ ++E+ + +
Sbjct: 169 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
Query: 158 PFPDLSDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
++ Q+ L++L + K P + L + C RPTF +++
Sbjct: 229 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
PR S+ +Q + A Q+ G+ ++ + IH+D+AARN L+ +D VKI GL+K
Sbjct: 127 PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGE---------M 157
+ E Y+ R + P+ W E + + +F SDV+++ ++E+ + +
Sbjct: 186 EGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 245
Query: 158 PFPDLSDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
++ Q+ L++L + K P + L + C RPTF +++
Sbjct: 246 ELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 57 SQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 114
SQAV A +A G+ H + + + +R+ +I D++ +IS++ + K ++Q
Sbjct: 111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSPGRM 169
Query: 115 YRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y A W+ EA+ +D +D++++A L+WE+ + E+PF DLS+ ++ ++
Sbjct: 170 YAPA-----WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTR-EVPFADLSNMEIGMKV 223
Query: 172 ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+ L +++ L + C++ P +RP F IV L
Sbjct: 224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
PR + +Q + A Q+ G+ ++ + IH+ +AARN L+ +D VKI GL+K
Sbjct: 104 PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 162
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMP---FP 160
+ EYY+ R + P+ W E + + +F SDV+++ ++E+ + + P F
Sbjct: 163 EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT 222
Query: 161 DL---SDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+L + Q+ L++L + + P I L + C RPTF ++V L
Sbjct: 223 ELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282
Query: 214 SDA 216
A
Sbjct: 283 QTA 285
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
PR + +Q + A Q+ G+ ++ + IH+ +AARN L+ +D VKI GL+K
Sbjct: 105 PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP 163
Query: 109 QK-EYYKYR-NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF---NKGEMP---FP 160
+ EYY+ R + P+ W E + + +F SDV+++ ++E+ + + P F
Sbjct: 164 EGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFT 223
Query: 161 DL---SDDQV----LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+L + Q+ L++L + + P I L + C RPTF ++V L
Sbjct: 224 ELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283
Query: 214 SDA 216
A
Sbjct: 284 QTA 286
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
L SQ YQ+ G+ H R++H+D+ +N LI+SD ++K++ GL++ +
Sbjct: 115 GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPV 173
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + ++ L + P + ++ST D+++ C+ E+ G+ FP ++DD L ++
Sbjct: 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKI 232
Query: 172 ES 173
S
Sbjct: 233 FS 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
L SQ YQ+ G+ H R++H+D+ +N LI+SD ++K++ GL++ +
Sbjct: 115 GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPV 173
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
Y + ++ L + P + ++ST D+++ C+ E+ G+ FP ++DD L ++
Sbjct: 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKI 232
Query: 172 ES 173
S
Sbjct: 233 FS 234
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
++ Q + A Q+ G++++ ++ +H+D+AARN L+ S+ VKI GL+K +T ++
Sbjct: 123 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 182
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
+ P+ W E + +F SDV+++ + E+
Sbjct: 183 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKE 111
++ Q + A Q+ G++++ ++ +H+D+AARN L+ S+ VKI GL+K +T ++
Sbjct: 111 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEX 170
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
+ P+ W E + +F SDV+++ + E+
Sbjct: 171 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 57 SQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISS-DLSVKISLSGLSKDTYQKEYY 113
S + + +ALG+E++ ++ ++H+D+ + N + S D + + T Q+ +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH 181
Query: 114 KYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV--LS 169
+ +W+ E + +E ++ K+D Y++A +++ I GE PF + S ++ ++
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFIN 240
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ + L P + ++ E C P +RP F IV +LS+
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 57 SQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISS-----DLSVKISLSGLSKDTYQ 109
S + + +ALG+E++ ++ ++H+D+ + N + S + K++ GLS Q
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----Q 177
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
+ + + +W+ E + +E ++ K+D Y++A +++ I GE PF + S ++
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKI 236
Query: 168 --LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
++ + + L P + ++ E C P +RP F IV +LS+
Sbjct: 237 KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L + T+ ++ GL+++ +R IH+DI A N L+S VK++ G++ +
Sbjct: 113 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 172
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P W+ E + + K+D+++ E+ KGE P DL +VL +
Sbjct: 173 RNXFVGTPF-WMAPEVIKQSAYDFKADIWSLGITAIEL-AKGEPPNSDLHPMRVLFLIPK 230
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
L +HS E++ E C++ P RPT
Sbjct: 231 NSPPTLEGQHSKPFKEFV----EACLNKDPRFRPT 261
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS--GLSKDTYQ---KEYYKYRNAI 119
Q+ L ++ ++ + H+DI N L S++ S +I L GLSK+ Y+ EYY +
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY----GM 231
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIW------EIFNKGEMPFPDLSDDQVLSQLES 173
PY V + +T ++ Y C W + G +PFP ++D +SQ+ +
Sbjct: 232 TTKAGTPY-FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN 290
Query: 174 KKLCWKH 180
KKLC+++
Sbjct: 291 KKLCFEN 297
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
LS A+ Q+ G++H D R++H+DI +N LI S+ ++KI G++K +
Sbjct: 108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ + + +++ E + +D+Y+ +++E+ GE PF
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML-VGEPPF 212
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--------VKISLSGLSKDTYQKE 111
+ +A Q+A + + + LIH ++ A+N L+ + +K+S G+S K+
Sbjct: 116 LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 112 YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
+ R + W+P E + + + +D +++ +WEI + G+ P L + L
Sbjct: 176 ILQER-----IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF 230
Query: 171 LESKKLCWKHSSKTPEY--ITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV 221
E +H P+ + +L C+ P RP+F +I+ L+ D+
Sbjct: 231 YED-----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--------VKISLSGLSKDTYQKE 111
+ +A Q+A + + + LIH ++ A+N L+ + +K+S G+S K+
Sbjct: 116 LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 112 YYKYRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
+ R + W+P E + + + +D +++ +WEI + G+ P L + L
Sbjct: 176 ILQER-----IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF 230
Query: 171 LESKKLCWKHSSKTPEY--ITSLHEKCIHPHPHQRPTFPSIVTQLSDAMCNDV 221
E +H P+ + +L C+ P RP+F +I+ L+ D+
Sbjct: 231 YED-----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ LEH+ +R++H+DI N I++ VK+ GL + K + P
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYM 203
Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQLESKKLCW 178
P E + ++ ++ KSD+++ CL++E+ F +M L + + Q + L
Sbjct: 204 SP-ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPS 260
Query: 179 KHSSKTPEYITSLHEKCIHPHPHQRP 204
H S E + L CI+P P +RP
Sbjct: 261 DHYS---EELRQLVNMCINPDPEKRP 283
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 57 SQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISS-DLSVKISLSGLSKDTYQKEYY 113
S + + +ALG+E++ ++ ++H+D+ + N + S D + + Q+ +
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH 181
Query: 114 KYRNAILPLRWLPYEAVFDDE--FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV--LS 169
+ +W+ E + +E ++ K+D Y++A +++ I GE PF + S ++ ++
Sbjct: 182 SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFIN 240
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSD 215
+ + L P + ++ E C P +RP F IV +LS+
Sbjct: 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++ +
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P W+ E + + +K+D+++ E+ +GE P +L +VL +
Sbjct: 176 RNXFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 233
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
L +S E++ E C++ P RPT
Sbjct: 234 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 264
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++ +
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P W+ E + + +K+D+++ E+ +GE P +L +VL +
Sbjct: 181 RNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 238
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
L +S E++ E C++ P RPT
Sbjct: 239 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++ +
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P W+ E + + +K+D+++ E+ +GE P +L +VL +
Sbjct: 161 RNXFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 218
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
L +S E++ E C++ P RPT
Sbjct: 219 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 249
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R Q TM ++ GL+++ ++ IH+DI A N L+S VK++ G++
Sbjct: 113 RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD 172
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
+ + P W+ E + + +K+D+++ E+ KGE P D+ +VL
Sbjct: 173 TQIKRNTFVGTPF-WMAPEVIQQSAYDSKADIWSLGITAIEL-AKGEPPNSDMHPMRVLF 230
Query: 170 QLESKK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
+ L + E+I + C++ P RPT
Sbjct: 231 LIPKNNPPTLVGDFTKSFKEFI----DACLNKDPSFRPT 265
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L +Q T+ ++ GL+++ ++ IH+DI A N L+S VK++ G++ +
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ P W+ E + + +K+D+++ E+ +GE P +L +VL +
Sbjct: 161 RNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFLIPK 218
Query: 174 KK---LCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
L +S E++ E C++ P RPT
Sbjct: 219 NNPPTLEGNYSKPLKEFV----EACLNKEPSFRPT 249
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
L + A + Q+ G+ + D+R++H+D+ +N LI+ + +KI+ GL++ +
Sbjct: 96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPV 154
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ---- 166
KY + I+ L + P + ++ST D+++ C+ E+ N G FP +S+ DQ
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRI 213
Query: 167 --VLSQLESKKLCWKHSSKTPEY 187
+L SK W + ++ P+Y
Sbjct: 214 FRILGTPNSKN--WPNVTELPKY 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
L + A + Q+ G+ + D+R++H+D+ +N LI+ + +KI+ GL++ +
Sbjct: 96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPV 154
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ---- 166
KY + ++ L + P + ++ST D+++ C+ E+ N G FP +S+ DQ
Sbjct: 155 RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GAPLFPGVSEADQLMRI 213
Query: 167 --VLSQLESKKLCWKHSSKTPEY 187
+L SK W + ++ P+Y
Sbjct: 214 FRILGTPNSKN--WPNVTELPKY 234
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
L + A + Q+ G+ + D+R++H+D+ +N LI+ + +KI+ GL++ +
Sbjct: 96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFGIPV 154
Query: 113 YKYRNAILPLRW-LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQ---- 166
KY + ++ L + P + ++ST D+++ C+ E+ N G FP +S+ DQ
Sbjct: 155 RKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRI 213
Query: 167 --VLSQLESKKLCWKHSSKTPEY 187
+L SK W + ++ P+Y
Sbjct: 214 FRILGTPNSKN--WPNVTELPKY 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ L L+H+ D++++H+DI ++N ++ D +V++ G+++ R I +
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVELARACIGTPYY 191
Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEM 157
L E + ++ KSD++A C+++E+ F G M
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM 230
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 132 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 189
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
EY R +L ++ E + S + DV++ C+++ + G+ PF +
Sbjct: 190 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 247
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
+++ K+ P++I SL +K + P RPT
Sbjct: 248 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 283
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 134 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 191
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
EY R +L ++ E + S + DV++ C+++ + G+ PF +
Sbjct: 192 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 249
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
+++ K+ P++I SL +K + P RPT
Sbjct: 250 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 285
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 108 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 165
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
EY R +L ++ E + S + DV++ C+++ + G+ PF +
Sbjct: 166 -EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 223
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
+++ K+ P++I SL +K + P RPT
Sbjct: 224 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 259
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ +IH+DI N L+S VK+ G ++ T Y + + R
Sbjct: 131 FQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFAR-TLAAPGEVYDDEV-ATR 188
Query: 124 WL--PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQV------------- 167
W P V D ++ DV+A CL+ E+F GE FP SD DQ+
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 168 ---------------LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
L +++ ++ + K E + L +KC+H P +RP
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
++AV A ++ GLE + +R++++D+ N L+ ++IS GL+ + +
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
K R + + ++ E V ++ ++ D +A CL++E+ G+ PF
Sbjct: 342 IKGR--VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPF 385
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
++AV A ++ GLE + +R++++D+ N L+ ++IS GL+ + +
Sbjct: 282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
K R + + ++ E V ++ ++ D +A CL++E+ G+ PF
Sbjct: 342 IKGR--VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPF 385
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
++ALGL+H+ +I++D+ N L+ + +K++ GLSK+ ++K+ Y + +
Sbjct: 138 ELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTV--- 194
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
++ E V S +D ++Y L++E+ G +PF Q + E+ L K
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLT-GSLPF------QGKDRKETMTLILKAKL 247
Query: 183 KTPEYITS 190
P+++++
Sbjct: 248 GMPQFLST 255
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
+IH+D+ N +IS+ +VK+ G+++ + A I ++L E D
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
+SDVY+ C+++E+ GE PF S D V Q
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPFTGDSPDSVAYQ 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 110 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 167
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
EY R L ++ E + S + DV++ C+++ + G+ PF +
Sbjct: 168 -EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 225
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
+++ K+ P++I SL +K + P RPT
Sbjct: 226 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 261
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 110 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 167
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
EY R L ++ E + S + DV++ C+++ + G+ PF +
Sbjct: 168 -EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 225
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
+++ K+ P++I SL +K + P RPT
Sbjct: 226 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 261
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 16/162 (9%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++L+ +A Q+ LG +++ R+IH+D+ N ++ DL VKI GL+
Sbjct: 114 RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-- 171
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
EY R L ++ E + S + DV++ C+++ + G+ PF +
Sbjct: 172 -EYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKET 229
Query: 168 LSQLESKKLCWKHSSKTPEYIT----SLHEKCIHPHPHQRPT 205
+++ K+ P++I SL +K + P RPT
Sbjct: 230 YLRIK------KNEYSIPKHINPVAASLIQKMLQTDPTARPT 265
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P ++ LS QA + G+E++ +++IH+DI N L+ D +KI+ G+S + +
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE-F 187
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDE--FSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD 165
+ N + ++ E++ + FS K+ DV+A ++ F G+ PF D
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY-CFVFGQCPFMDERIM 246
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
+ S+++S+ L + E + L + + +P R P I
Sbjct: 247 CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 55 STSQAVTMAYQVALG---LEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQK 110
+ + A++ Q + G L + K LIH+D+ N L+ + +V KI G + D
Sbjct: 101 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 160
Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
+A W+ E +S K DV+++ ++WE+ + PF ++
Sbjct: 161 MTNNKGSAA----WMAPEVFEGSNYSEKCDVFSWGIILWEVITR-RKPFDEIGGPAF--- 212
Query: 171 LESKKLCWKHSSKT--------PEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
++ W + T P+ I SL +C P QRP+ IV ++ M
Sbjct: 213 ----RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 55 STSQAVTMAYQVALG---LEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQK 110
+ + A++ Q + G L + K LIH+D+ N L+ + +V KI G + D
Sbjct: 100 TAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159
Query: 111 EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQ 170
+A W+ E +S K DV+++ ++WE+ + PF ++
Sbjct: 160 MTNNKGSAA----WMAPEVFEGSNYSEKCDVFSWGIILWEVITR-RKPFDEIGGPAF--- 211
Query: 171 LESKKLCWKHSSKT--------PEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
++ W + T P+ I SL +C P QRP+ IV ++ M
Sbjct: 212 ----RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--- 118
M +Q+ GL+ + R++H+D+ +N L++S +K++ GL++ Y ++ A
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 119 -ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
++ L + E + ++T D+++ C+ E+F +
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL 120
+ +Q+ GL + ++H+D+ +N LI+ + +K++ GL++ + Y ++
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVV 163
Query: 121 PLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-----ESK 174
L + P + +F + +ST D+++ C+ E+ N G FP D L ++
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 175 KLCWKHSSKTPEY 187
+ W +K P+Y
Sbjct: 224 EEQWPSMTKLPDY 236
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--- 118
M +Q+ GL+ + R++H+D+ +N L++S +K++ GL++ Y ++ A
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 119 -ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
++ L + E + ++T D+++ C+ E+F +
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--- 118
M +Q+ GL+ + R++H+D+ +N L++S +K++ GL++ Y ++ A
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR------IYSFQMALTS 178
Query: 119 -ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
++ L + E + ++T D+++ C+ E+F +
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
+IH+D+ N LIS+ +VK+ G+++ + A I ++L E D
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
+SDVY+ C+++E+ GE PF + D +S + ++H + P ++ HE
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 244
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 67 ALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRW 124
AL H +IH+D+ N +IS+ +VK+ G+++ + A I ++
Sbjct: 128 ALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 125 LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKT 184
L E D +SDVY+ C+++E+ GE PF + D +S + ++H +
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVRED 235
Query: 185 PEYITSLHE 193
P ++ HE
Sbjct: 236 PIPPSARHE 244
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 68/158 (43%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ +G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + +PE++ L + + + RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 21/171 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R L A+ + Q+ G+++I K+LIH+D+ N + VKI GL T
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV--TSL 186
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP------DLS 163
K K + LR++ E + ++ + D+YA ++ E+ + + F DL
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR 246
Query: 164 DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
D ++S + KK +L +K + P RP I+ L+
Sbjct: 247 -DGIISDIFDKKE------------KTLLQKLLSKKPEDRPNTSEILRTLT 284
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
+IH+D+ N +IS+ +VK+ G+++ + A I ++L E D
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
+SDVY+ C+++E+ GE PF + D +S + ++H + P ++ HE
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 244
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
+IH+D+ N +IS+ +VK+ G+++ + A I ++L E D
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
+SDVY+ C+++E+ GE PF + D +S + ++H + P ++ HE
Sbjct: 197 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 244
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA--ILPLRWLPYEAVFDDEF 135
+IH+D+ N +IS+ +VK+ G+++ + A I ++L E D
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 136 STKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSKTPEYITSLHE 193
+SDVY+ C+++E+ GE PF + D +S + ++H + P ++ HE
Sbjct: 214 DARSDVYSLGCVLYEVLT-GEPPF---TGDSPVS------VAYQHVREDPIPPSARHE 261
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-----SDLSVKISLSGLSKDTYQKEY 112
+ +T+ Q GL H+ ++H+D+ N LIS + IS GL K +
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 113 YKYRNAILPLR--WLPYEAVFDD--EFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDDQV 167
R + +P W+ E + +D E T + D+++ C+ + + ++G PF Q
Sbjct: 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
Query: 168 LSQLESKKLCWKHSSKTPEYIT-SLHEKCIHPHPHQRPT 205
L + L H K + I L EK I P +RP+
Sbjct: 239 NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS 277
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 15/112 (13%)
Query: 57 SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----------- 105
SQ V+ A +A G+ ++ +IH+D+ + NCL+ + +V ++ GL++
Sbjct: 108 SQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167
Query: 106 -DTYQKEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
+ +K K R ++ P W+ E + + K DV+++ ++ EI +
Sbjct: 168 LRSLKKPDRKKRYTVVGNPY-WMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 105
R ++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 119 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF 178
Query: 106 -DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
+K+ N I P E + S + D+++ C+++ + G+ PF
Sbjct: 179 DGERKKDLCGTPNYIAP------EVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCL 231
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
+ +++ K+ P +I + I H PT PS+ L+D
Sbjct: 232 KETYIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 277
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
++ Q T+ V L ++ ++ +IH+DI + + L++SD +K+S G KE
Sbjct: 138 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV-SKEVP 196
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
K + + W+ E + + T+ D+++ ++ E+ + GE P+
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPY 241
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS------KDT 107
L+ T+ Y + LG I + +IH+D+ NCL++ D SVK+ GL+ KDT
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
Query: 108 --------------YQKEYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLIWEI 151
+ K K + + RW P + + ++ D+++ C+ E+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 152 FN 153
N
Sbjct: 246 LN 247
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + +PE++ L + + + RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + +PE++ L + + + RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + +PE++ L + + + RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + +PE++ L + + + RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L+ Q T+ V L ++ + +IH+DI + + L++ D VK+S G K+
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI-SKDVP 196
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-E 172
K + + W+ E + ++T+ D+++ ++ E+ + GE P+ S Q + +L +
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRD 255
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
S K+S K + E+ + P +R T
Sbjct: 256 SPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT 288
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD--- 106
+V QAV A ++++GL + + +I++D+ N ++ S+ +KI+ G+ K+
Sbjct: 113 QVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM 172
Query: 107 --TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
+E+ + I P E + + D +AY L++E+ G+ PF +
Sbjct: 173 DGVTTREFCGTPDYIAP------EIIAYQPYGKSVDWWAYGVLLYEML-AGQPPFDGEDE 225
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
D++ + + + S + S+ + + HP +R
Sbjct: 226 DELFQSIMEHNVSYPKS--LSKEAVSICKGLMTKHPAKR 262
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
Q GL+ + ++H+D+ N L++S +VK++ GL++ Y Y+ A+ P
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALFPVVV 173
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
L + E + ++T D+++ C+ E+F +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 207
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---- 105
R ++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF 194
Query: 106 -DTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
+K+ N I P E + S + D+++ C+++ + G+ PF
Sbjct: 195 DGERKKDLCGTPNYIAP------EVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCL 247
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
+ +++ K+ P +I + I H PT PS+ L+D
Sbjct: 248 KETYIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-- 192
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
E+ R L ++ E + S + D+++ C+++ + G+ PF +
Sbjct: 193 -EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKET 250
Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
+++ K+ P +I + I H PT PS+ L+D
Sbjct: 251 YIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/149 (20%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++ + ++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPEVVT 188
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVLSQLESKKLC 177
+ E + + D+++ C++ E+ KG + FP ++V+ QL
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVIEQL------ 241
Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
+ PE++ L + + + RP +
Sbjct: 242 ---GTPCPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++++ +A Q G++++ + R+IH+D+ N ++ D+ VKI GL+
Sbjct: 135 RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-- 192
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
E+ R L ++ E + S + D+++ C+++ + G+ PF +
Sbjct: 193 -EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKET 250
Query: 168 LSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF-PSIVTQLSD 215
+++ K+ P +I + I H PT PS+ L+D
Sbjct: 251 YIRIK------KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 175
Query: 124 WLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 235 WPGVTSMPDY 244
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++ + ++
Sbjct: 129 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FMMTPYVVT 186
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVLSQLESKKLC 177
+ E + + D+++ C++ E+ KG + F ++V+ QL
Sbjct: 187 RYYRAPEVILGMGYKENVDIWSVGCIMGELV-KGSVIFQGTDHIDQWNKVIEQL------ 239
Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
+ + E++ +L + + + RP +P I
Sbjct: 240 ---GTPSAEFMAAL-QPTVRNYVENRPAYPGI 267
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL 120
+ +Q+ GL + ++H+D+ +N LI+ + +K++ GL++ + Y ++
Sbjct: 105 SFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCYSAEVV 163
Query: 121 PLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL-----ESK 174
L + P + +F + +ST D+++ C+ E+ N FP D L ++
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 175 KLCWKHSSKTPEY 187
+ W +K P+Y
Sbjct: 224 EEQWPSMTKLPDY 236
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 180
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 239
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + PE++ L + + + RP +
Sbjct: 240 EQL---------GTPCPEFMKKL-QPTVRTYVENRPKY 267
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
S+S Q + + A GL ++ + +IH+D+ + N L+ + KI+ G+SK + +
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 113 YKYRNAI-LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
+ L ++ E + KSDVY++ +++E+
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + PE++ L + + + RP +
Sbjct: 239 EQL---------GTPCPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
++AL L+H+ +I++D+ N L+ + +K++ GLSK++ ++K+ Y + +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV--- 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
++ E V + +D +++ L++E+ G +PF + ++ + KL
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAKLG 244
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
Q GL+ + ++H+D+ N L++S +VK++ GL++ Y Y+ A+ P
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALTPVVV 181
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
L + E + ++T D+++ C+ E+F +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 215
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 33/123 (26%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAIL 120
T+ Y + +G++++ ++H+D+ NCL++ D SVK+ GL++ +Y + N+ L
Sbjct: 160 TLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV---DYPENGNSQL 216
Query: 121 PL----------------------------RWL--PYEAVFDDEFSTKSDVYAYACLIWE 150
P+ RW P + + ++ DV++ C+ E
Sbjct: 217 PISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAE 276
Query: 151 IFN 153
+ N
Sbjct: 277 LLN 279
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 25/125 (20%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT------ 107
L+ T+ Y + LG + I + +IH+D+ NCL++ D SVKI GL++
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
Query: 108 -----------------YQKEYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLI 148
+ K K + + RW P + + ++ D+++ C+
Sbjct: 188 HIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 149 WEIFN 153
E+ N
Sbjct: 248 AELLN 252
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
++AL L+H+ +I++D+ N L+ + +K++ GLSK++ ++K+ Y + +
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV--- 190
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
++ E V + +D +++ L++E+ G +PF + ++ + KL
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAKLG 244
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--YQKEYYKYRNAILPL 122
++AL L+H+ +I++D+ N L+ + +K++ GLSK++ ++K+ Y + +
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV--- 191
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
++ E V + +D +++ L++E+ G +PF + ++ + KL
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAKLG 245
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
Q GL+ + ++H+D+ N L++S +VK++ GL++ Y Y+ A+ P
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALAPVVV 173
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
L + E + ++T D+++ C+ E+F +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 207
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 35/161 (21%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTACTN 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + ++ D+++ C++ E+ KG + F ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV-KGCVIFQGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QL + + E++ +L + + + RP +P I
Sbjct: 239 EQL---------GTPSAEFMAAL-QPTVRNYVENRPKYPGI 269
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY- 108
+V AV A ++A+GL + K +I++D+ N ++ S+ +KI+ G+ K+
Sbjct: 114 QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173
Query: 109 ----QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
K + + I P E + + D +A+ L++E+ G+ PF +
Sbjct: 174 DGVTTKXFCGTPDYIAP------EIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDE 226
Query: 165 DQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
D++ + + + S + ++ + + HP +R
Sbjct: 227 DELFQSIMEHNVAYPKS--MSKEAVAICKGLMTKHPGKR 263
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKIS-----LSGLSKDTYQK---EYYKYRNAIL 120
L++I +H+ + A + LIS D V +S LS +S Q+ ++ KY +L
Sbjct: 140 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199
Query: 121 PLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV-LSQLESKKLC 177
P WL E + + + KSD+Y+ E+ N G +PF D+ Q+ L +L C
Sbjct: 200 P--WLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPC 256
Query: 178 WKHSSKTP 185
+S P
Sbjct: 257 LLDTSTIP 264
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 133 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 181
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
+P+ E + + D+++ C++ E+ KG + FP ++V+
Sbjct: 182 FMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDHIDQWNKVI 240
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + PE++ L + + + RP +
Sbjct: 241 EQL---------GTPCPEFMKKL-QPTVRTYVENRPKY 268
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKIS-----LSGLSKDTYQK---EYYKYRNAIL 120
L++I +H+ + A + LIS D V +S LS +S Q+ ++ KY +L
Sbjct: 124 ALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 183
Query: 121 PLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV-LSQLESKKLC 177
P WL E + + + KSD+Y+ E+ N G +PF D+ Q+ L +L C
Sbjct: 184 P--WLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPC 240
Query: 178 WKHSSKTP 185
+S P
Sbjct: 241 LLDTSTIP 248
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 231 WPGVTSMPDY 240
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 231 WPGVTSMPDY 240
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 12/137 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY- 108
+V AV A ++A+GL + K +I++D+ N ++ S+ +KI+ G+ K+
Sbjct: 435 QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494
Query: 109 ----QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
K + + I P E + + D +A+ L++E+ G+ PF +
Sbjct: 495 DGVTTKXFCGTPDYIAP------EIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDE 547
Query: 165 DQVLSQLESKKLCWKHS 181
D++ + + + S
Sbjct: 548 DELFQSIMEHNVAYPKS 564
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 231 WPGVTSMPDY 240
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 172
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 178 WKHSSKTPEYITSL 191
W + P+Y S
Sbjct: 232 WPGVTSMPDYKPSF 245
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEYITSL 191
W + P+Y S
Sbjct: 230 WPGVTSMPDYKPSF 243
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 21/171 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R L A+ + Q+ G+++I K+LI++D+ N + VKI GL T
Sbjct: 115 RGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV--TSL 172
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP------DLS 163
K K + LR++ E + ++ + D+YA ++ E+ + + F DL
Sbjct: 173 KNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLR 232
Query: 164 DDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
D ++S + KK +L +K + P RP I+ L+
Sbjct: 233 DG-IISDIFDKKE------------KTLLQKLLSKKPEDRPNTSEILRTLT 270
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 227 WPGVTSMPDY 236
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 175
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 235 WPGVTSMPDY 244
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 229 WPGVTSMPDY 238
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 231 WPGVTSMPDY 240
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 230 WPGVTSMPDY 239
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI +GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 227 WPGVTSMPDY 236
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 229 WPGVTSMPDY 238
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 229 WPGVTSMPDY 238
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 172
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 232 WPGVTSMPDY 241
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 231 WPGVTSMPDY 240
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 227 WPGVTSMPDY 236
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 227 WPGVTSMPDY 236
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+ + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
A P P E + +E+ D +A ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 227 WPGVTSMPDY 236
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLW 167
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 227 WPGVTSMPDY 236
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+ + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
A P P E + +E+ D +A ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+ + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
A P P E + +E+ D +A ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 230 WPGVTSMPDY 239
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+A+ Q+ GLEH+ + +I++D+ N L+ D +V+IS GL+ + +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY 349
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI 151
A P P E + +E+ D +A ++E+
Sbjct: 350 AGTPGFMAP-ELLLGEEYDFSVDYFALGVTLYEM 382
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS-KDTYQKE 111
S+S Q + + A GL ++ + +IH+D+ + N L+ + KI+ G+S K T +
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
+ L ++ E + KSDVY++ +++E+
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ +N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 170
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 178 WKHSSKTPEYITSL 191
W + P+Y S
Sbjct: 230 WPGVTSMPDYKPSF 243
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ ++LS + YQ+ GL++I +IH+D+ N ++ D ++I GL++ D
Sbjct: 116 KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE 175
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ +G+ FP
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELL-QGKALFP 222
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 168
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 228 WPGVTSMPDY 237
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 229 WPGVTSMPDY 238
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 171
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 231 WPGVTSMPDY 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 25/142 (17%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----------VKISLSGL 103
L +A+ Q GLE++ +R++H D+ A N L+SSD S V + GL
Sbjct: 163 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 104 SKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS 163
KD +Y + E V K DV++ C++ + N G P+
Sbjct: 223 GKDLLTGDYIPGTET-----HMAPEVVLGRSCDAKVDVWSSCCMMLHMLN-GCHPW---- 272
Query: 164 DDQVLSQLESKKLCWKHSSKTP 185
+Q LC K +S+ P
Sbjct: 273 -----TQFFRGPLCLKIASEPP 289
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL R++H+D+ N LI+++ ++K++ GL++ + Y + ++ L
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVVTLW 169
Query: 124 WLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLES----KKLC 177
+ E + +ST D+++ C+ E+ + + FP S+ DQ+ + ++
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL-FPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 178 WKHSSKTPEY 187
W + P+Y
Sbjct: 229 WPGVTSMPDY 238
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ ++LS + YQ+ GL++I +IH+D+ N ++ D ++I GL++ D
Sbjct: 124 KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ +G+ FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELL-QGKALFP 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP--- 121
Q GL+ + ++H+D+ N L++S +VK++ GL++ Y Y+ A+ P
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------IYSYQMALDPVVV 173
Query: 122 -LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
L + E + ++T D+++ C+ E+F +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
RV+ S ++A +Q+ G+ ++ ++H+D+ N L++ ++++KI+ GL+
Sbjct: 105 RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
Y P ++ E +SDV++ C+ + + G PF
Sbjct: 165 PHEKHYTLCGTP-NYISPEIATRSAHGLESDVWSLGCMFYTLL-IGRPPF 212
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 206
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 207 EMTGYVATRWYRAPEIMLNWMHYNMTV--------DIWSVGCIMAELLT-GRTLFPGTDH 257
Query: 165 DQVLSQL 171
L Q+
Sbjct: 258 INQLQQI 264
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P+ + ++ A +AY L D ++IH+D+ A N L+ + + GL+K
Sbjct: 131 PKRQRIALGSARGLAY-----LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS----D 164
K+ + + + E + + S K+DV+ Y ++ E+ G+ F DL+ D
Sbjct: 186 YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF-DLARLAND 243
Query: 165 DQVL------SQLESKK--------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
D V+ L+ KK L + + E + + C P +RP +V
Sbjct: 244 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 211 TQLS 214
L
Sbjct: 304 RMLE 307
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ +G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ ++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + +PE++ L + + + RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 35/158 (22%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ +G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD----DQVL 168
PY E + + D+++ ++ E+ KG + FP ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI-KGGVLFPGTDHIDQWNKVI 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + +PE++ L + + + RP +
Sbjct: 239 EQL---------GTPSPEFMKKL-QPTVRTYVENRPKY 266
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQ 109
++LS + YQ+ GL++I +IH+D+ N ++ D ++I GL++ D
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM 185
Query: 110 KEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
Y YR + L W+ Y D+++ C++ E+ +G+ FP SD
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELL-QGKALFPG-SD-- 233
Query: 167 VLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFP 207
+ QL K++ + +PE + + + + P P
Sbjct: 234 YIDQL--KRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP 272
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD--TYQKEYYKYRNAILP 121
YQ+ GL+++ ++IH+D+ N L++ + +KI G+++ T E+ + +
Sbjct: 166 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 122 LRW--LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
RW P + E++ D+++ C+ E+ + ++ FP
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL-FP 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------DLSVKISLSGLSK- 105
+++ Q+A G+ H+ ++IH+D+ +N L+S+ +L + IS GL K
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 106 -DTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEM 157
D+ Q + N W E + E STK D+++ C+ + I +KG+
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELL---EESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 158 PFPD 161
PF D
Sbjct: 253 PFGD 256
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------DLSVKISLSGLSK- 105
+++ Q+A G+ H+ ++IH+D+ +N L+S+ +L + IS GL K
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 195
Query: 106 -DTYQKEY-YKYRNAILPLRWLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEM 157
D+ Q + N W E + E STK D+++ C+ + I +KG+
Sbjct: 196 LDSGQXXFRXNLNNPSGTSGWRAPELL---EESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 158 PFPD 161
PF D
Sbjct: 253 PFGD 256
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK------ 105
R L + +Q+ GL + +++H+D+ +N LI+ +K+ GL++
Sbjct: 103 RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162
Query: 106 DTYQKE----YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD 161
+T+ E +Y+ + ++ R +ST D+++ C++ E+ G+ FP
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSR----------TYSTSIDIWSCGCILAEMIT-GKPLFPG 211
Query: 162 LSDDQVLSQL-----ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP 204
+D++ L + + W +K P+Y +P+ QRP
Sbjct: 212 TNDEEQLKLIFDIMGTPNESLWPSVTKLPKY---------NPNIQQRP 250
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 25/184 (13%)
Query: 49 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
P+ + ++ A +AY L D ++IH+D+ A N L+ + + GL+K
Sbjct: 139 PKRQRIALGSARGLAY-----LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS----D 164
K+ + + + E + + S K+DV+ Y ++ E+ G+ F DL+ D
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF-DLARLAND 251
Query: 165 DQVL------SQLESKK--------LCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
D V+ L+ KK L + + E + + C P +RP +V
Sbjct: 252 DDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 211 TQLS 214
L
Sbjct: 312 RMLE 315
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 188
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD 182
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 176
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 177 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 223
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD--TYQKEYYKYRNAILP 121
YQ+ GL+++ ++IH+D+ N L++ + +KI G+++ T E+ + +
Sbjct: 165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 122 LRW--LPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
RW P + E++ D+++ C+ E+ + ++ FP
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL-FP 264
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 196
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 197 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 243
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 187
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 188 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 234
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 188
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 189 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 235
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 244
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 198 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 244
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 201 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 247
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R L+ SQ + Q L ++ D ++IH+D+ A N L + D +K++ G+S +
Sbjct: 103 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTX 162
Query: 112 YYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEI 151
+ + I W+ E V D + K+DV++ + E+
Sbjct: 163 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 110 K--EYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 236
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 236
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 110 K--EYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 189
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 190 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 236
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 182
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 183 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
Query: 110 KEYYK-----YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 198 EMXGXVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 179
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184
Query: 110 K--EYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 184
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 185 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 200
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 201 EMXGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 247
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 174
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 175 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 175
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 240 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 274
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 26/168 (15%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD-TYQKEY 112
+ +A + Q+ +++ KR++H+D+ A N L+ +D+++KI+ G S + T +
Sbjct: 111 MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQ 166
+ A P PY A + F K DV++ +++ + + G +PF D Q
Sbjct: 171 DAFCGA--P----PYAA--PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQ 217
Query: 167 VLSQLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
L +L + L K+ + P Y+++ L ++ + +P +R T I+
Sbjct: 218 NLKELRERVLRGKY--RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 174 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 26/157 (16%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD-TYQKEYYKYRNAILPLR 123
Q+ +++ K ++H+D+ A N L+ +D+++KI+ G S + T+ + + A P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGA--P-- 176
Query: 124 WLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
PY A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 177 --PYAA--PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLR 227
Query: 178 WKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
K+ + P Y+++ L +K + +P +R T I+
Sbjct: 228 GKY--RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 240 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 274
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 124 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA-----------RTAGTS 172
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 233 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 267
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 240 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 274
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD---TYQKEYYKYRNAILPLRWL 125
GL +I +++H+D+ A N LI+ D +K++ GL++ + +Y N ++ L +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 126 PYEAVFDD-EFSTKSDVYAYACLIWEIFNK 154
P E + + ++ D++ C++ E++ +
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 110 KEYYK-----YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGXVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 240 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 274
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 183
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ D
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD 179
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 180 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 130 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 178
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 179 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 238
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 239 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 273
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 173
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 233
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 234 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 268
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 172
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 233 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 267
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 110 K-----EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 217
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 277
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 278 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 312
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 57 SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-----DTYQKE 111
S+A A ++ LGL+ + K ++++D+ N L+ D +KI+ G+ K D E
Sbjct: 119 SRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNE 178
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
+ + I P E + +++ D +++ L++E+ G+ PF ++++ +
Sbjct: 179 FCGTPDYIAP------EILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELFHSI 231
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 217
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 277
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 278 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 312
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 240 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 274
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYK---YR 116
+ YQ+ GL++I +IH+D+ N ++ D +KI GL++ D Y YR
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 185
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ L W+ Y D+++ C++ E+ G FP
Sbjct: 186 APEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 220
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 180
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 240
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 241 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 275
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 173
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 233
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 234 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 268
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 179
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 240 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 274
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 132 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 180
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 240
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRP-----TFPSI 209
QL + PE++ L + + + RP TFP +
Sbjct: 241 QL---------GTPCPEFMKKL-QPTVRNYVENRPKYAGLTFPKL 275
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
Query: 110 K-----EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMAGFVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD---TYQKEYYKYRNAILPLRWL 125
GL +I +++H+D+ A N LI+ D +K++ GL++ + +Y N ++ L +
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 126 PYEAVFDD-EFSTKSDVYAYACLIWEIFNK 154
P E + + ++ D++ C++ E++ +
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-----------YY 113
Q+A +E + K L+H+D+ N + D VK+ GL Q E Y
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF-PDLSDDQVLSQLE 172
++ + ++ E + + +S K D+++ +++E+ PF + + L+ +
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVR 241
Query: 173 SKKLCWKHSSKTP-EYITSLHEKCIHPHPHQRPTFPSIV 210
+ K + K P EY+ + + + P P +RP +I+
Sbjct: 242 NLKFPPLFTQKYPCEYV--MVQDMLSPSPMERPEAINII 278
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD---TYQKEYYKYRNAILPLRWL 125
GL +I +++H+D+ A N LI+ D +K++ GL++ + +Y N ++ L +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 126 PYEAVFDD-EFSTKSDVYAYACLIWEIFNK 154
P E + + ++ D++ C++ E++ +
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
Query: 110 K-----EYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ YR + L W+ Y + D+++ C++ E+ G FP
Sbjct: 174 EMAGFVATRWYRAPEIMLNWMHY--------NQTVDIWSVGCIMAELLT-GRTLFP 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD-TYQKEYYKYRNAILPLR 123
Q+ +++ K ++H+D+ A N L+ +D+++KI+ G S + T+ + ++ + P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGS--P-- 176
Query: 124 WLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
PY A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 177 --PYAA--PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLR 227
Query: 178 WKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
K+ + P Y+++ L +K + +P +R T I+
Sbjct: 228 GKY--RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD---TYQKEYYKYRNAILPLRWL 125
GL +I +++H+D+ A N LI+ D +K++ GL++ + +Y N ++ L +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 126 PYEAVFDD-EFSTKSDVYAYACLIWEIFNK 154
P E + + ++ D++ C++ E++ +
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLIS-SDLS----VKISLSGLSKDTYQKEYYKYRNA 118
YQ+ G+ +R +H+D+ +N L+S SD S +KI GL++ + ++ +
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFGIPIRQFTHE 197
Query: 119 ILPLRWLPYEAVFDDE-FSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLESKKL 176
I+ L + P E + +ST D+++ AC+ E+ K + FP S+ DQ+ E L
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL-FPGDSEIDQLFKIFEVLGL 256
Query: 177 ----CWKHSSKTPEYITSL 191
W + P++ S
Sbjct: 257 PDDTTWPGVTALPDWKQSF 275
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R ++L+ + T+ GLE++ R IH+DI A N L++++ K++ G++
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL-- 175
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
+ RN ++ P W+ E + + ++ +D+++ E+ +G+ P+ D+ +
Sbjct: 176 TDXMAKRNXVIGTPF-WMAPEVIQEIGYNCVADIWSLGITAIEM-AEGKPPYADIHPMRA 233
Query: 168 LSQLESKKLCWKHSSKTPEY----ITSLHEKCIHPHPHQRPT 205
+ + + + + PE T ++C+ P QR T
Sbjct: 234 IFMIPTNP---PPTFRKPELWSDNFTDFVKQCLVKSPEQRAT 272
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-YQK 110
+ LS YQ+ GL++I ++H+D+ N LI++ +KI GL++ +
Sbjct: 139 QQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEH 198
Query: 111 EYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 199 DHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N+ + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + S SD++A C+I+++
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQL 227
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ +++ K ++H+D+ A N L+ +D+++KI+ G S + + + N +
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLDTFCG 174
Query: 125 LPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW 178
P A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 175 SPPYAA-PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLRG 228
Query: 179 KHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
K+ + P Y+++ L +K + +P +R T I+
Sbjct: 229 KY--RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ +++ K ++H+D+ A N L+ +D+++KI+ G S + + + N +
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLDTFCG 174
Query: 125 LPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW 178
P A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 175 SPPYAA-PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLRG 228
Query: 179 KHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
K+ + P Y+++ L +K + +P +R T I+
Sbjct: 229 KY--RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ +++ K ++H+D+ A N L+ +D+++KI+ G S + + + N +
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLDTFCG 174
Query: 125 LPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW 178
P A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 175 SPPYAA-PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLRG 228
Query: 179 KHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
K+ + P Y+++ L +K + +P +R T I+
Sbjct: 229 KY--RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++ + ++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMEPEVVT 188
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLSQLESKKLCW 178
+ E + + D+++ C++ E+ +K P D D ++V+ QL
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL------- 241
Query: 179 KHSSKTPEYITSLHEKCIHPHPHQRPTF 206
+ PE++ L + + + RP +
Sbjct: 242 --GTPCPEFMKKL-QPTVRTYVENRPKY 266
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+A A G+ + + IH+DI + N L+ + KIS GL++ + K+ ++
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-----EKFAQTVMX 192
Query: 122 LRWLPYEA-----VFDDEFSTKSDVYAYACLIWEIF 152
R + A E + KSD+Y++ ++ EI
Sbjct: 193 XRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEII 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ +++ K ++H+D+ A N L+ +D+++KI+ G S + + + N +
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE------FTFGNKLDTFCG 167
Query: 125 LPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW 178
P A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 168 SPPYAA-PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLRG 221
Query: 179 KHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
K+ + P Y+++ L +K + +P +R T I+
Sbjct: 222 KY--RIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL++ + ++
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMEPEVVT 188
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLSQL 171
+ E + + D+++ C++ E+ +K P D D ++V+ QL
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 23/125 (18%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------DLSVKISLSGLSK- 105
+++ Q+A G+ H+ ++IH+D+ +N L+S+ +L + IS GL K
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 106 -DTYQKEY-YKYRNAILPLRWLPYEAVFD-DEFSTKS------DVYAYACLIWEIFNKGE 156
D+ Q + N W E + + + TK D+++ C+ + I +KG+
Sbjct: 178 LDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 157 MPFPD 161
PF D
Sbjct: 238 HPFGD 242
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 25/142 (17%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----------VKISLSGL 103
L +A+ Q GLE++ +R++H D+ A N L+SSD S V + GL
Sbjct: 182 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 104 SKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS 163
K +Y + E V K DV++ C++ + N G P+
Sbjct: 242 GKSLLTGDYIPGTET-----HMAPEVVLGRSCDAKVDVWSSCCMMLHMLN-GCHPW---- 291
Query: 164 DDQVLSQLESKKLCWKHSSKTP 185
+Q LC K +S+ P
Sbjct: 292 -----TQFFRGPLCLKIASEPP 308
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+A A G+ + + IH+DI + N L+ + KIS GL++ + K+ ++
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-----EKFAQXVMX 186
Query: 122 LRWLPYEA-----VFDDEFSTKSDVYAYACLIWEIF 152
R + A E + KSD+Y++ ++ EI
Sbjct: 187 XRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEII 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 82/168 (48%), Gaps = 26/168 (15%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD-TYQKEY 112
+ +A + Q+ +++ KR++H+D+ A N L+ +D+++KI+ G S + T +
Sbjct: 108 MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 167
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQ 166
+ + P PY A + F K DV++ +++ + + G +PF D Q
Sbjct: 168 DTFCGS--P----PYAA--PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQ 214
Query: 167 VLSQLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
L +L + L K+ + P Y+++ L ++ + +P +R T I+
Sbjct: 215 NLKELRERVLRGKY--RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 23/125 (18%)
Query: 60 VTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------DLSVKISLSGLSK- 105
+++ Q+A G+ H+ ++IH+D+ +N L+S+ +L + IS GL K
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 106 -DTYQKEY-YKYRNAILPLRWLPYEAVFD-DEFSTKS------DVYAYACLIWEIFNKGE 156
D+ Q + N W E + + + TK D+++ C+ + I +KG+
Sbjct: 178 LDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
Query: 157 MPFPD 161
PF D
Sbjct: 238 HPFGD 242
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQ 109
+ L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL + D
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM 179
Query: 110 KEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 136 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 184
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 185 FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 244
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + PE++ L + + + RP +
Sbjct: 245 QL---------GTPCPEFMKKL-QPTVRTYVENRPKY 271
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+A A G+ + + IH+DI + N L+ + KIS GL++ + K+ ++
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-----EKFAQTVMX 192
Query: 122 LRWLPYEA-----VFDDEFSTKSDVYAYACLIWEIF 152
R + A E + KSD+Y++ ++ EI
Sbjct: 193 SRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEII 228
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 57 SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 116
S+A A ++ LGL+ + K ++++D+ N L+ D +KI+ G+ K+ +
Sbjct: 118 SRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX 177
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
P ++ E + +++ D +++ L++E+ G+ PF ++++ +
Sbjct: 178 FCGTP-DYIAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQDEEELFHSI 230
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI GL++ T
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT-D 176
Query: 110 KEYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
E Y + RW P + ++ D+++ C++ E+ G FP
Sbjct: 177 DEMTGY----VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT-GRTLFP 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+ YQ+ G++H+ +IH+D+ N ++ SD ++KI GL+ R A
Sbjct: 125 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------RTAGTS 173
Query: 122 LRWLPY---------EAVFDDEFSTKSDVYAYACLIWEIF-NKGEMPFPDLSD--DQVLS 169
PY E + + D+++ C++ E+ +K P D D ++V+
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIE 233
Query: 170 QLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTF 206
QL + PE++ L + + + RP +
Sbjct: 234 QL---------GTPCPEFMKKL-QPTVRTYVENRPKY 260
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + NA + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 42/91 (46%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILP 121
+A A G+ + + IH+DI + N L+ + KIS GL++ + + + I+
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVG 188
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
E + KSD+Y++ ++ EI
Sbjct: 189 TTAYXAPEALRGEITPKSDIYSFGVVLLEII 219
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
+ Q + + LE + ++IH+DI + N L+ D SVK++ G ++
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ P W+ E V + K D+++ + E+ +GE P+
Sbjct: 173 RSEMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPY 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
++ GL H+ ++IH+DI +N L++ + VK+ G+S + + I W
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ-LDRTVGRRNTFIGTPYW 195
Query: 125 LPYEAVFDDE-----FSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWK 179
+ E + DE + KSD+++ E+ +G P D+ + L +
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEM-AEGAPPLCDMHPMRALFLIPRNPAPRL 254
Query: 180 HSSKTPEYITSLHEKCIHPHPHQRPT 205
S K + S E C+ + QRP
Sbjct: 255 KSKKWSKKFQSFIESCLVKNHSQRPA 280
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 196
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 197 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 196
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 197 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 174
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 175 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 178
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 179 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 174
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 175 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 180
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L+ +AV + Q+ L+ H+D+ N L+S+D + G++ T ++
Sbjct: 131 LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT 190
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ N + L + E + + ++D+YA C+++E G P+
Sbjct: 191 QLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLT-GSPPY 235
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 181
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 182 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 163
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
A L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 223 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
+ Q + + LE + ++IH+DI + N L+ D SVK++ G ++
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ P W+ E V + K D+++ + E+ +GE P+
Sbjct: 173 RSXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPY 216
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 123 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 182
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 183 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 114 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 173
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 174 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY- 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 125 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 184
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 185 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY- 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 176
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 176
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 176
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 180
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADP 176
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLIS--------SDLSVKISLSGLSKDTYQKEYYKYR 116
Q+ GL+++ D +++H+DI N LI+ SD L+G++ T
Sbjct: 130 QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--------E 181
Query: 117 NAILPLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK 174
L+++ E + + +D+++ C I E+ G+ PF +L + Q K
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAM---FK 237
Query: 175 KLCWKHSSKTPEYITSLHE----KCIHPHPHQR 203
+K + PE +++ + KC P P +R
Sbjct: 238 VGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 181 DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
+ Q + + LE + ++IH+DI + N L+ D SVK++ G ++
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ P W+ E V + K D+++ + E+ +GE P+
Sbjct: 174 RSXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPY 217
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 181
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 182 DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 178
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 179 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
+ Q + + LE + ++IH+DI + N L+ D SVK++ G ++
Sbjct: 113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ P W+ E V + K D+++ + E+ +GE P+
Sbjct: 173 RSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPY 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ GL + ++++H+D+ +N LI+ +K++ GL++ Y N ++ L
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLW 165
Query: 124 WLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ P + + ++ST+ D++ C+ +E+ G FP
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMAT-GRPLFP 202
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT-Y 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADP 176
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 177 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 166
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
A L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 167 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 226 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 26/153 (16%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLIS--------SDLSVKISLSGLSKDTYQKEYYKYR 116
Q+ GL+++ D +++H+DI N LI+ SD L+G++ T
Sbjct: 116 QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--------E 167
Query: 117 NAILPLRWLPYEAVFDD--EFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESK 174
L+++ E + + +D+++ C I E+ G+ PF +L + Q K
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAM---FK 223
Query: 175 KLCWKHSSKTPEYITSLHE----KCIHPHPHQR 203
+K + PE +++ + KC P P +R
Sbjct: 224 VGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 121 KCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
++ E + + SD++A C+I+++ G PF ++ + +++
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLV-AGLPPFRAGNEGLIFAKI 246
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N+ + +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
++ E + + SD++A C+I+++ G PF ++ + +++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEGLIFAKI 246
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTY 108
+ + LS YQ+ GL++I ++H+D+ N L+++ +KI GL++
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADP 178
Query: 109 QKEYYKYRNAILPLRWLPY-EAVFDDEFSTKS-DVYAYACLIWEIFNK 154
++ + + RW E + + + TKS D+++ C++ E+ +
Sbjct: 179 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
++ L LEH+ +I++DI N L+ S+ V ++ GLSK+ E + + + +
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 125 LPYEAV--FDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSS 182
+ + V D D ++ L++E+ G PF D + SQ E + K
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFT--VDGEKNSQAEISRRILKSEP 283
Query: 183 KTPEYITSLHEKCI 196
P+ +++L + I
Sbjct: 284 PYPQEMSALAKDLI 297
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 168
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 169 TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 227
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 228 FTF------PDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS-KDTYQK 110
R L+ SQ + Q L ++ D ++IH+D+ A N L + D +K++ G+S K+T +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT--R 187
Query: 111 EYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEI 151
+ + I W+ E V D + K+DV++ + E+
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 12/172 (6%)
Query: 28 DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 87
D K F L T A + Q+ G+ ++ ++H+DI N
Sbjct: 117 DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPEN 176
Query: 88 CLI---SSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAY 144
L+ +S L++KI GLS ++ + YK R+ + ++ E V +++ K DV++
Sbjct: 177 ILLENKNSLLNIKIVDFGLS--SFFSKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSC 233
Query: 145 ACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC-----WKHSSKTPEYITSL 191
+++ I G PF +D ++ ++E K WK+ S + + L
Sbjct: 234 GVIMY-ILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKL 284
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD-TYQKEYYKYRNAILPLR 123
Q+ +++ K ++H+D+ A N L+ +D ++KI+ G S + T+ + + A
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP---- 176
Query: 124 WLPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
PY A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 177 --PYAA--PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLR 227
Query: 178 WKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSI 209
K+ + P Y ++ L +K + +P +R T I
Sbjct: 228 GKY--RIPFYXSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS-KDTYQK 110
R L+ SQ + Q L ++ D ++IH+D+ A N L + D +K++ G+S K+T +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT--R 187
Query: 111 EYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEI 151
+ + I W+ E V D + K+DV++ + E+
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYE 128
GLE++ ++H+D+ N L+ + +K++ GL+K ++ Y + ++ + E
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRAYXHQVVTRWYRAPE 182
Query: 129 AVFDDE-FSTKSDVYAYACLIWEIFNKGEMPF-PDLSD-DQVLSQLES----KKLCWKHS 181
+F + D++A C++ E+ + +PF P SD DQ+ E+ + W
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELLLR--VPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
Query: 182 SKTPEYIT 189
P+Y+T
Sbjct: 241 CSLPDYVT 248
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLI----SSDLSVKISLSGLSKDTYQKEYYKYR 116
++ Q+ LGL+++ + +IH DI N L+ S + ++I ++ L + E+Y
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-- 193
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD-----LSDDQVLSQL 171
N+I + E + + +D+++ ACLI+E+ + PD DD ++Q+
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLI----SSDLSVKISLSGLSKDTYQKEYYKYR 116
++ Q+ LGL+++ + +IH DI N L+ S + ++I ++ L + E+Y
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-- 193
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD-----LSDDQVLSQL 171
N+I + E + + +D+++ ACLI+E+ + PD DD ++Q+
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL 122
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K K ++
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTH 354
Query: 123 RWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPF 159
++ E + + + +D ++ C+++++ +G PF
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL 122
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K K ++
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTH 354
Query: 123 RWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPF 159
++ E + + + +D ++ C+++++ +G PF
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPF 391
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQL 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQL 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL 122
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K K ++
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTH 354
Query: 123 RWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPF 159
++ E + + + +D ++ C+++++ +G PF
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPF 391
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RR 166
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 226 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL 122
A ++ LGLEH+ ++ ++++D+ N L+ V+IS GL+ D +K K ++
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTH 353
Query: 123 RWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPF 159
++ E + + + +D ++ C+++++ +G PF
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPF 390
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DT 107
+ + L+ + YQ+ GL++I +IH+D+ N ++ D +KI L++ D
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD 177
Query: 108 YQKEYYK---YRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
Y YR + L W+ Y D+++ C++ E+ G FP
Sbjct: 178 EMTGYVATRWYRAPEIMLNWMHYNQTV--------DIWSVGCIMAELLT-GRTLFP 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQL 205
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-----RR 165
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 166 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 224
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 225 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 104
L S T+ +V GLE++ IH+D+ A N L+ D SV+I+ G+S
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQL 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P +L E + D+++ D + +++E+ G +PF
Sbjct: 158 DGATMKXFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS-KDTYQK 110
R L+ SQ + Q L ++ D ++IH+D+ A N L + D +K++ G+S K+T +
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT--R 187
Query: 111 EYYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEI 151
+ I W+ E V D + K+DV++ + E+
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N+ + +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQL 224
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 103 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 162
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P +L E + D+++ D + +++E+ G +PF
Sbjct: 163 DGATMKXFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P +L E + D+++ D + +++E+ G +PF
Sbjct: 158 DGATMKXFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S + +
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTD 170
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFT 229
Query: 178 WKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 230 F------PDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P +L E + D+++ D + +++E+ G +PF
Sbjct: 158 DGATMKXFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P +L E + D+++ D + +++E+ G +PF
Sbjct: 158 DGATMKTFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG 173
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 174 T---LDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFT 229
Query: 178 WKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 230 F------PDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 104
L S T+ +V GLE++ IH+D+ A N L+ D SV+I+ G+S
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 14/157 (8%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S + +
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTD 166
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFT 225
Query: 178 WKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 226 F------PDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQL 202
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
++ + T ++A L + KR+IH+DI N L+ S +KI+ G S
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
+ + L +LP E + K D+++ L +E F G+ PF + +
Sbjct: 161 S---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 216
Query: 170 QLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
++ + + P+++T L + + +P QRP ++
Sbjct: 217 RISRVEFTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQL 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 168
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 227
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 228 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 167
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 226
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 227 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 166
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 226 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 163
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 164 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 223 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 108 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 162
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 163 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 221
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 222 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 168
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 227
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 228 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 106 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 160
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 161 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 219
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 220 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 98 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P +L E + D+++ D + +++E+ G +PF
Sbjct: 158 DGATMKTFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 166
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 226 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
++ + T ++A L + KR+IH+DI N L+ S +KI+ G S
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
+ + L +LP E + K D+++ L +E F G+ PF + +
Sbjct: 161 S---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 216
Query: 170 QLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
++ + + P+++T L + + +P QRP ++
Sbjct: 217 RISRVEFTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R R + +A ++ LE++ + ++++DI N ++ D +KI+ GL K+
Sbjct: 101 RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 160
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P +L E + D+++ D + +++E+ G +PF
Sbjct: 161 DGATMKTFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R+
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RD 165
Query: 118 AIL-PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKL 176
+ L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 166 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEF 224
Query: 177 CWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 225 TF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQL 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 163
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 164 TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 223 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R L+ Q + Q+ L + KR+IH+D+ A N L++ + ++++ G+S K
Sbjct: 104 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL-KT 162
Query: 112 YYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEI 151
K + I W+ E V D + K+D+++ + E+
Sbjct: 163 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYK---YR 116
+ YQ+ GL++I ++H+D+ N ++ D +KI GL++ D Y YR
Sbjct: 149 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYR 208
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
+ L W+ Y D+++ C++ E+
Sbjct: 209 APEVILSWMHYNQTV--------DIWSVGCIMAEMLT 237
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
++ + T ++A L + KR+IH+DI N L+ S +KI+ G S
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 163
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
+ + L +LP E + K D+++ L +E F G+ PF + +
Sbjct: 164 S---RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 219
Query: 170 QLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
++ + + P+++T L + + +P QRP ++
Sbjct: 220 RISRVEFTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
++ + T ++A L + KR+IH+DI N L+ S +KI+ G S
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 186
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
R L L +LP E + K D+++ L +E F G+ PF + +
Sbjct: 187 S-----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQET 240
Query: 168 LSQLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
++ + + P+++T L + + +P QRP ++
Sbjct: 241 YKRISRVEFTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPL-R 123
++ LE++ K +IH+D+ N L++ D+ ++I+ G +K + N + +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 124 WLPYEAVFDDEFSTKSDVYAYACLIWEI 151
++ E + + SD++A C+I+++
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQL 224
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 166
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 167 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 226 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 126 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 180
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 181 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 239
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 240 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 163
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 164 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 223 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYYK---YR 116
+ YQ+ GL++I ++H+D+ N ++ D +KI GL++ D Y YR
Sbjct: 131 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYR 190
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
+ L W+ Y D+++ C++ E+
Sbjct: 191 APEVILSWMHYNQTV--------DIWSVGCIMAEMLT 219
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 69 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYE 128
LE + ++IH++I + N L+ D SVK++ G ++ + P W+ E
Sbjct: 129 ALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY-WMAPE 187
Query: 129 AVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
V + K D+++ + E+ +GE P+
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMI-EGEPPY 217
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----RR 165
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 166 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 224
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 225 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
R L+ Q + Q+ L + KR+IH+D+ A N L++ + ++++ G+S K
Sbjct: 112 RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL-KT 170
Query: 112 YYKYRNAILPLRWLPYEAVF-----DDEFSTKSDVYAYACLIWEI 151
K + I W+ E V D + K+D+++ + E+
Sbjct: 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S +
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTE 165
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFT 224
Query: 178 WKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 225 F------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
++ + T ++A L + KR+IH+DI N L+ S +KI+ G S
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VH 183
Query: 110 KEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLS 169
+ + L +LP E + K D+++ L +E F G+ PF + +
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYK 242
Query: 170 QLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
++ + + P+++T L + + +P QRP ++
Sbjct: 243 RISRVEFTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S +KI+ G S R
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS-----RR 164
Query: 118 AILP--LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKK 175
L L +LP E + K D+++ L +E F G+ PF + + ++ +
Sbjct: 165 TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 223
Query: 176 LCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
+ P+++T L + + +P QRP ++
Sbjct: 224 FTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/157 (18%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-----------YY 113
Q+A +E + K L+H+D+ N + D VK+ GL Q E Y
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES 173
+ + ++ E + + +S K D+++ +++E+ + ++++ + +
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST---QMERVRIITDVRN 288
Query: 174 KKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
K + K P+ + + + P P +RP I+
Sbjct: 289 LKFPLLFTQKYPQEHMMVQD-MLSPSPTERPEATDII 324
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 241 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
K+ + +L E + D+++ D + +++E+ G +PF
Sbjct: 301 -KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 349
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 27/180 (15%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-VKISLSGLSKDTYQKEY 112
L+ Q + + + GLE I K H+D+ N L+ + V + L +++ E
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE- 189
Query: 113 YKYRNAILPLRWLPYEAVFD----DEFSTKS--------DVYAYACLIWEIFNKGEMPFP 160
R A+ W + FS +S DV++ C+++ + GE P+
Sbjct: 190 -GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF-GEGPY- 246
Query: 161 DLSDDQVLSQLESKKLCWKHSSKTPE------YITSLHEKCIHPHPHQRPTFPSIVTQLS 214
D V + +S L ++ P+ + L + PHQRP P +++QL
Sbjct: 247 ----DMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 244 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 303
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
K+ + +L E + D+++ D + +++E+ G +PF
Sbjct: 304 -KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 352
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----------VKISLSGL 103
L +A+ Q GLE++ +R++H D+ A N L+SSD S + + GL
Sbjct: 147 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206
Query: 104 SKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
K +Y + P E V K D+++ C++ + N
Sbjct: 207 GKSLLTGDYIPGTETHMAP------EVVMGKPCDAKVDIWSSCCMMLHMLN 251
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 76/173 (43%), Gaps = 15/173 (8%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC------LISSDLSVKISLSGLSKDT 107
L ++ +A ++ G+ ++ K ++HKD+ ++N ++ +D + S+SG+ +
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGL-FSISGVLQAG 185
Query: 108 YQKEYYKYRNAIL------PLRWLPYEAVFDD-EFSTKSDVYAYACLIWEIFNKGEMPFP 160
+++ + +N L +R L + D FS SDV+A IW + E PF
Sbjct: 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT-IWYELHAREWPFK 244
Query: 161 DLSDDQVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQL 213
+ ++ Q+ + + I+ + C +RPTF ++ L
Sbjct: 245 TQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 103 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 162
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ P +L E + D+++ D + +++E+ G +PF
Sbjct: 163 KDGATMKXFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 211
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----------VKISLSGL 103
L +A+ Q GLE++ +R++H D+ A N L+SSD S + + GL
Sbjct: 161 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 220
Query: 104 SKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
K +Y + P E V K D+++ C++ + N
Sbjct: 221 GKSLLTGDYIPGTETHMAP------EVVMGKPCDAKVDIWSSCCMMLHMLN 265
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK-----YR 116
+ YQ+ GL +I +IH+D+ N ++ D +KI GL++ + YR
Sbjct: 133 LVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYR 192
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
+ L W+ Y + D+++ C++ E+
Sbjct: 193 APEVILNWMRY--------TQTVDIWSVGCIMAEMIT 221
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
++ + T ++A L + K++IH+DI N L+ S +KI+ G S
Sbjct: 101 KLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
R A L L +LP E + K D+++ L +E F G+ PF +
Sbjct: 161 S-----RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQDT 214
Query: 168 LSQLESKKLCWKHSSKTPEYITS----LHEKCIHPHPHQRPTFPSIV 210
++ + + P+++T L + + +P QRP ++
Sbjct: 215 YKRISRVEFTF------PDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 101 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 160
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ P +L E + D+++ D + +++E+ G +PF
Sbjct: 161 KDGATMKXFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 59 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA 118
AV +A AL + H +IH+DI + + L++ D VK+S G KE + +
Sbjct: 251 AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXL 307
Query: 119 ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ W+ E + + + D+++ ++ E+ + GE P+
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 347
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----------VKISLSGL 103
L +A+ Q GLE++ +R++H D+ A N L+SSD S + + GL
Sbjct: 163 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 222
Query: 104 SKDTYQKEYY-KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFN 153
K +Y + P E V K D+++ C++ + N
Sbjct: 223 GKSLLTGDYIPGTETHMAP------EVVMGKPCDAKVDIWSSCCMMLHMLN 267
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 108
R R S +A ++ L+++ S+K ++++D+ N ++ D +KI+ GL K+
Sbjct: 102 RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 161
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ P +L E + D+++ D + +++E+ G +PF
Sbjct: 162 KDGATMKXFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPF 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEY-YKYR 116
+A + LEH+ K +IH+D+ N LI++ VK+ +SG D+ K +
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCK 217
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQ 170
+ P R P + +S KSD+++ + E+ ++ PF L QV+ +
Sbjct: 218 PYMAPERINP--ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK--QVVEE 273
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
+ K S++ ++ + +C+ + +RPT+P ++
Sbjct: 274 PSPQLPADKFSAEFVDFTS----QCLKKNSKERPTYPELM 309
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFST 137
++H+D+ N + +VK+ GL++ E + P P E + ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSP-EQMNRMSYNE 195
Query: 138 KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES---KKLCWKHSSKTPEYITSLHEK 194
KSD+++ CL++E+ PF S ++ ++ +++ +++S + E IT +
Sbjct: 196 KSDIWSLGCLLYELCALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM--- 251
Query: 195 CIHPHPHQRPTFPSIV 210
++ + RP+ I+
Sbjct: 252 -LNLKDYHRPSVEEIL 266
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYYKYRNAI 119
Y + LGL + + ++H+D+ N L++ + + I L++ D + Y +R
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYR 200
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
P + ++ F+ D+++ C++ E+FN+
Sbjct: 201 APELVMQFKG-----FTKLVDMWSAGCVMAEMFNR 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----DTYQKEYYKYRNAI 119
Y + LGL + + ++H+D+ N L++ + + I L++ D + Y +R
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYR 200
Query: 120 LPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNK 154
P + ++ F+ D+++ C++ E+FN+
Sbjct: 201 APELVMQFKG-----FTKLVDMWSAGCVMAEMFNR 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEY-YKYR 116
+A + LEH+ K +IH+D+ N LI++ VK+ +SG D K+ +
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCK 173
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQ 170
+ P R P + +S KSD+++ + E+ ++ PF L QV+ +
Sbjct: 174 PYMAPERINP--ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK--QVVEE 229
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIV 210
+ K S++ ++ + +C+ + +RPT+P ++
Sbjct: 230 PSPQLPADKFSAEFVDFTS----QCLKKNSKERPTYPELM 265
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 59 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA 118
AV +A AL + H +IH+DI + + L++ D VK+S G KE + +
Sbjct: 174 AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXL 230
Query: 119 ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ W+ E + + + D+++ ++ E+ + GE P+
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 270
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQKEY 112
L A YQ+ GL++I ++H+D+ N I++ DL +KI GL++ +
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR--IMDPH 174
Query: 113 YKYRNAI---LPLRWL--PYEAVFDDEFSTKSDVYAYACLIWEIF 152
Y ++ + L +W P + + ++ D++A C+ E+
Sbjct: 175 YSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
R+ S A A Q+ L E++ LI++D+ N +I +K++ GL+K
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-- 191
Query: 110 KEYYKYRNAIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
K R L +L E + ++ D +A LI+E+ G PF Q+
Sbjct: 192 ----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQI 246
Query: 168 LSQLESKKL 176
++ S K+
Sbjct: 247 YEKIVSGKV 255
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 52 RSLSTSQAVTMAYQVALGLEHI--------SDKRLIHKDIAARNCLISSDLSVKISLSGL 103
++L A+ +A A GL H+ + H+D +RN L+ S+L I+ GL
Sbjct: 100 QTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGL 159
Query: 104 SKDTYQ-KEYYKYRNA--ILPLRWLPYEAVFDDEFSTK-------SDVYAYACLIWEI 151
+ Q +Y N + R++ E V D++ T +D++A+ ++WEI
Sbjct: 160 AVMHSQGSDYLDIGNNPRVGTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 33.9 bits (76), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 59 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA 118
AV +A AL + H +IH+DI + + L++ D VK+S G KE + +
Sbjct: 129 AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXL 185
Query: 119 ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ W+ E + + + D+++ ++ E+ + GE P+
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 59 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA 118
AV +A AL + H +IH+DI + + L++ D VK+S G KE + +
Sbjct: 131 AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXL 187
Query: 119 ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ W+ E + + + D+++ ++ E+ + GE P+
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 227
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 63 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY--KYRNAIL 120
A +V L LE++ K +I++D+ N L+ + +KI+ G +K Y + I
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIA 171
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD 161
P E V ++ D +++ LI+E+ G PF D
Sbjct: 172 P------EVVSTKPYNKSIDWWSFGILIYEML-AGYTPFYD 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S+ +KI+ G S R
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-----RR 167
Query: 118 AIL--PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
L L +LP E + K D+++ L +E F G PF
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPF 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRN 117
+ T ++A L + KR+IH+DI N L+ S+ +KI+ G S R+
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RD 168
Query: 118 AILP-LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ L +LP E + K D+++ L +E F G PF
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPF 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ +++ K ++H+D+ A N L+ D+++KI+ G S + + N +
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNE------FTVGNKLDTFCG 175
Query: 125 LPYEAVFDDEFSTKS------DVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCW 178
P A + F K DV++ +++ + + G +PF D Q L +L + L
Sbjct: 176 SPPYAA-PELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPF----DGQNLKELRERVLRG 229
Query: 179 KHSSKTPEYITS 190
K+ + P Y+++
Sbjct: 230 KY--RIPFYMST 239
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 105
+ QA Q+ GLE++ + ++HKDI N L+++ ++KIS G+++
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 9/157 (5%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L + + + GL ++ +IH+D+ A N L+S VK+ G +
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208
Query: 112 YYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
+ + W+ E + + ++ K DV++ E+ + + P +++ L
Sbjct: 209 XF-----VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAMSAL 262
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
+ + S EY + + C+ P RPT
Sbjct: 263 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 59 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA 118
AV +A AL + H +IH+DI + + L++ D VK+S G KE + +
Sbjct: 124 AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXL 180
Query: 119 ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ W+ E + + + D+++ ++ E+ + GE P+
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRW 124
Q+ +E+ +++H+D+ N L+ +L+VKI+ GLS + K + P
Sbjct: 116 QIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK-TSCGSPNYA 174
Query: 125 LPYEAVFDDEFSTKSDVYAYAC-LIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHSSK 183
P V + + +V ++C ++ + G +PF DD+ + L K +
Sbjct: 175 AP--EVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCVYV-- 226
Query: 184 TPEYIT----SLHEKCIHPHPHQRPTFPSI 209
P++++ SL + I P QR T I
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRITIQEI 256
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 59 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA 118
AV +A AL + H +IH+DI + + L++ D VK+S G KE + +
Sbjct: 120 AVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKXL 176
Query: 119 ILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ W+ E + + + D+++ ++ E+ + GE P+
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPY 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 75/184 (40%), Gaps = 22/184 (11%)
Query: 55 STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDTYQKE 111
S + A +Q+ + HI ++H+D+ N L++S +VK++ GL+ + ++
Sbjct: 128 SEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
+ A P +L E + D + D++A +++ I G PF D ++ Q+
Sbjct: 188 QAWFGFAGTP-GYLSPEVLRKDPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHKLYQQI 245
Query: 172 -----------------ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLS 214
E+K L + + P + + HP QR T S++ +
Sbjct: 246 KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQE 305
Query: 215 DAMC 218
C
Sbjct: 306 TVEC 309
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
++ T ++A L + ++++IH+DI N L+ +KI+ G S
Sbjct: 111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSL 167
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ R L +LP E + K D++ L +E F G PF
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE-FLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
++ T ++A L + ++++IH+DI N L+ +KI+ G S
Sbjct: 112 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSL 168
Query: 114 KYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ R L +LP E + K D++ L +E F G PF
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE-FLVGMPPF 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 57 SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 116
++ T ++A L + ++++IH+DI N L+ +KI+ G S + R
Sbjct: 114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRR 170
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
L +LP E + K D++ L +E F G PF
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE-FLVGMPPF 212
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 9/157 (5%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE 111
+ L + + + GL ++ +IH+D+ A N L+S VK+ G +
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169
Query: 112 YYKYRNAILPLRWLPYEAVF---DDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
+ + W+ E + + ++ K DV++ E+ + + P +++ L
Sbjct: 170 XF-----VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAMSAL 223
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPT 205
+ + S EY + + C+ P RPT
Sbjct: 224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT 260
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D E+ R+
Sbjct: 112 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS 171
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLC 177
+ P E + +S +SD+++ + E+ G P P ++ ++L + ++
Sbjct: 172 YMSP------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPRPPMAIFELLDYIVNEP-- 222
Query: 178 WKHSSKTPEYITSLH-----EKCIHPHPHQR 203
K P + SL KC+ +P +R
Sbjct: 223 ---PPKLPSAVFSLEFQDFVNKCLIKNPAER 250
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-DTYQK 110
R + ++ +Q + IH+D+ N LI+ +K+ G ++ T
Sbjct: 97 RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156
Query: 111 EYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD 164
+YY A RW P V D ++ DV+A C+ E+ + G +P SD
Sbjct: 157 DYYDDEVAT---RWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS-GVPLWPGKSD 208
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI-FNKGEMPFPDLSDD 165
+ P E + +S +SD+++ + E+ + +P PD +D
Sbjct: 169 YMSP------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFST 137
++H+D+ N + +VK+ GL++ + P P E + ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP-EQMNRMSYNE 195
Query: 138 KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES---KKLCWKHSSKTPEYITSLHEK 194
KSD+++ CL++E+ PF S ++ ++ +++ +++S + E IT +
Sbjct: 196 KSDIWSLGCLLYELCALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM--- 251
Query: 195 CIHPHPHQRPTFPSIV 210
++ + RP+ I+
Sbjct: 252 -LNLKDYHRPSVEEIL 266
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 78 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLRWLPYEAVFDDEFST 137
++H+D+ N + +VK+ GL++ + P P E + ++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP-EQMNRMSYNE 195
Query: 138 KSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLES---KKLCWKHSSKTPEYITSLHEK 194
KSD+++ CL++E+ PF S ++ ++ +++ +++S + E IT +
Sbjct: 196 KSDIWSLGCLLYELCALMP-PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM--- 251
Query: 195 CIHPHPHQRPTFPSIV 210
++ + RP+ I+
Sbjct: 252 -LNLKDYHRPSVEEIL 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 22/174 (12%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDTYQKEYYKYRNAILP 121
Q+ + H ++H+D+ N L++S +VK++ GL+ + + + A P
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL---------- 171
+L E + + + D++A +++ I G PF D ++ Q+
Sbjct: 171 -GYLSPEVLRKEAYGKPVDIWACGVILY-ILLVGYPPFWDEDQHKLYQQIKAGAYDFPSP 228
Query: 172 -------ESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAMC 218
E+K L + + P + HE HP QR T S++ + C
Sbjct: 229 EWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVEC 282
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 19/159 (11%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVK---ISLSGLSKDTYQKEY-YKYR 116
+A + LEH+ K +IH+D+ N LI++ VK +SG D K+ +
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCK 200
Query: 117 NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEI------FNKGEMPFPDLSDDQVLSQ 170
P R P + +S KSD+++ E+ ++ PF L QV+ +
Sbjct: 201 PYXAPERINP--ELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLK--QVVEE 256
Query: 171 LESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
+ K S++ ++ + +C+ + +RPT+P +
Sbjct: 257 PSPQLPADKFSAEFVDFTS----QCLKKNSKERPTYPEL 291
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 83/214 (38%), Gaps = 49/214 (22%)
Query: 53 SLSTSQAVT---MAYQVALGLEHISDK---------RLIHKDIAARNCLISSDLSVKISL 100
SL TS V+ +A+ V GL ++ + + H+D+ +RN L+ +D + IS
Sbjct: 104 SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163
Query: 101 SGLSKDTYQKEYYK---YRNAILP----LRWLPYEA------VFDDEFSTKS-DVYAYAC 146
GLS + NA + +R++ E + D E + K D+YA
Sbjct: 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGL 223
Query: 147 LIWEIFNK------GE------MPF-------PDLSDDQVLSQLESKK----LCWKHSSK 183
+ WEIF + GE M F P D QVL E ++ WK +S
Sbjct: 224 IYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSL 283
Query: 184 TPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM 217
+ E C R T ++++ M
Sbjct: 284 AVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
L ++ + Q+ G+++ ++H+D+ N L+ + ++ KI+ GLS E+
Sbjct: 113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172
Query: 114 KYR----NAILP--LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQV 167
+ N P + Y D +S+ +YA C G +PF DD V
Sbjct: 173 RXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC--------GTLPF---DDDHV 221
Query: 168 LSQLESKKLCWKHSSKTPEY----ITSLHEKCIHPHPHQRPTFPSI 209
+ KK+C TP+Y + SL + + P +R T I
Sbjct: 222 PTLF--KKIC-DGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 105
YQ+ L ++++ + +IH+D+ N L+SS D +KI+ G SK
Sbjct: 246 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 105
YQ+ L ++++ + +IH+D+ N L+SS D +KI+ G SK
Sbjct: 260 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 50 RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKD 106
R ++LS + Q+ L + + ++HKD+ N L S +KI GL+ +
Sbjct: 117 RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-E 175
Query: 107 TYQKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQ 166
++ + + A L P VF + + K D+++ +++ + G +PF S ++
Sbjct: 176 LFKSDEHSTNAAGTALYMAP--EVFKRDVTFKCDIWSAGVVMYFLLT-GCLPFTGTSLEE 232
Query: 167 VLSQLESKKLCWKHSSK--TPEYITSLHEKCIHPHPHQRPTFPSIV 210
V + K+ + + TP+ + L ++ + P +RP+ ++
Sbjct: 233 VQQKATYKEPNYAVECRPLTPQAV-DLLKQMLTKDPERRPSAAQVL 277
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN--CLISSDLSVKISLSGLSKDTYQKE 111
+S ++ + Q GL+H+ + ++H DI N C SVKI GL+ E
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQL 171
K A + E V + +D++A L + + + G PF D L L
Sbjct: 206 IVKVTTAT--AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDD---LETL 259
Query: 172 ESKKLC-WK-----HSSKTPE---YITSLHEK 194
++ K C W+ SS +PE +I +L +K
Sbjct: 260 QNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQK 291
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 104
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS
Sbjct: 100 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS +
Sbjct: 104 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 163
Query: 114 K 114
K
Sbjct: 164 K 164
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+
Sbjct: 119 VSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 178
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ P E + +S +SD+++ + E+ G P P
Sbjct: 179 YMAP------ERLQGTHYSVQSDIWSMGLSLVEL-AVGRYPIP 214
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 161 ERLLNKMXGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 217
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 218 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT- 169
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 170 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSXQEYSDWKEKKTYL 227
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 228 NPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT- 169
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 170 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 228 NPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT- 169
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 170 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 228 NPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 105
YQ+ L ++++ + +IH+D+ N L+SS D +KI+ G SK
Sbjct: 120 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS +
Sbjct: 110 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 169
Query: 114 K 114
K
Sbjct: 170 K 170
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 113
+S +A Q+ +E+ +++H+D+ N L+ L+VKI+ GLS +
Sbjct: 109 MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL 168
Query: 114 K 114
K
Sbjct: 169 K 169
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 105
YQ+ L ++++ + +IH+D+ N L+SS D +KI+ G SK
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 105
YQ+ L ++++ + +IH+D+ N L+SS D +KI+ G SK
Sbjct: 127 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 169
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 170 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 228 NPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
Q+ L +I + +IH+D+ N I +VKI GL+K+ ++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 105
YQ+ L ++++ + +IH+D+ N L+SS D +KI+ G SK
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 161 ERLLNKMCGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 217
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 218 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
Q+ L +I + +IH+D+ N I +VKI GL+K+ ++
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK 105
YQ+ L ++++ + +IH+D+ N L+SS D +KI+ G SK
Sbjct: 121 YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ ++Y N L
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT------VFRYNNRERLLN 164
Query: 124 ----WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESK 174
LPY E + EF + DV++ ++ + GE+P+ SD Q S + K
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEK 223
Query: 175 KLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
K WK P +L K + +P R T P I
Sbjct: 224 KTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 160 ERLLNKMXGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 216
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 217 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 170
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 171 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 229 NPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 99 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 159 ERLLNKMCGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 215
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 216 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 257
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 160 ERLLNKMCGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 216
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 217 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 160 ERLLNKMCGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 216
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 217 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 160 ERLLNKMCGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 216
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 217 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 170
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 171 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 229 NPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 169
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 170 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 228 NPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-------- 105
LS YQ ++ + +IH+D+ N LI+S+ +K+ GL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 106 DTYQKEYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLIWEIF 152
++ + RW P + ++S DV++ C++ E+F
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 170
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 171 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 229 NPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 170
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 171 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 229 NPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 170
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 171 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 229 NPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 112 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 170
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 171 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 229 NPWKKIDSAP---LALLHKILVENPSARITIPDI 259
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 14/165 (8%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ A +Q+ G+ ++ + H+DI N L+ ++KIS GL+
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 159
Query: 113 YKYRNAILPLRWLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QV 167
+ N + LPY E + EF + DV++ ++ + GE+P+ SD Q
Sbjct: 160 ERLLNKMCGT--LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQE 216
Query: 168 LSQLESKKLC---WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
S + KK WK P +L K + +P R T P I
Sbjct: 217 YSDWKEKKTYLNPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 22/129 (17%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCL-ISSDL-------------SVK---ISLSGLS 104
MAYQ+ L + + +L H D+ N L ++S+ SVK I ++
Sbjct: 128 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187
Query: 105 KDTYQKEYYKYRNAILPLR-WLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS 163
T+ E++ I+ R + P E + + ++ DV++ C+++E + +G F
Sbjct: 188 SATFDHEHH---TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY-RGFTLFQTHE 243
Query: 164 DDQVLSQLE 172
+ + L +E
Sbjct: 244 NREHLVMME 252
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+
Sbjct: 171 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 230
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ P E + +S +SD+++ + E+ G P P
Sbjct: 231 YMSP------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 266
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 14/154 (9%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNAILPLR 123
+Q+ G+ ++ + H+DI N L+ ++KIS GL+ + N +
Sbjct: 111 HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT- 169
Query: 124 WLPY---EAVFDDEFSTKS-DVYAYACLIWEIFNKGEMPFPDLSDD-QVLSQLESKKLC- 177
LPY E + EF + DV++ ++ + GE+P+ SD Q S + KK
Sbjct: 170 -LPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 178 --WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
WK P +L K + +P R T P I
Sbjct: 228 NPWKKIDSAP---LALLHKILVENPSARITIPDI 258
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 30.0 bits (66), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 22/129 (17%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCL-ISSDL-------------SVK---ISLSGLS 104
MAYQ+ L + + +L H D+ N L ++S+ SVK I ++
Sbjct: 137 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 196
Query: 105 KDTYQKEYYKYRNAILPLR-WLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLS 163
T+ E++ I+ R + P E + + ++ DV++ C+++E + +G F
Sbjct: 197 SATFDHEHH---TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY-RGFTLFQTHE 252
Query: 164 DDQVLSQLE 172
+ + L +E
Sbjct: 253 NREHLVMME 261
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 165
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 166 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIRG 219
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 220 QVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEI 252
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCL-ISSDL-------------SVK---ISLSGLS 104
MAYQ+ L + + +L H D+ N L ++S+ SVK I ++
Sbjct: 160 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 219
Query: 105 KDTYQKEYYKYRNAILPLR-WLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
T+ E++ I+ R + P E + + ++ DV++ C+++E +
Sbjct: 220 SATFDHEHH---TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 265
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---- 109
LS YQ ++ + +IH+D+ N LI+S+ +K+ GL++ +
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 110 -KEYYKYRNAILPL---RWL--PYEAVFDDEFSTKSDVYAYACLIWEIF 152
E ++ ++ RW P + ++S DV++ C++ E+F
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 54 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-------- 105
LS YQ ++ + +IH+D+ N LI+S+ +K+ GL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 106 DTYQKEYYKYRNAILPLRWL--PYEAVFDDEFSTKSDVYAYACLIWEIF 152
++ + RW P + ++S DV++ C++ E+F
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 66 VALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRNAILP 121
V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+ + P
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 199
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
E + +S +SD+++ + E+ G P P
Sbjct: 200 ------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 231
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ P E + +S +SD+++ + E+ G P P
Sbjct: 169 YMSP------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 165
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 166 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 219
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 220 QVFFRQRVSSEC-----------QHLIRWCLALRPSDRPTFEEI 252
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ P E + +S +SD+++ + E+ G P P
Sbjct: 169 YMSP------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ P E + +S +SD+++ + E+ G P P
Sbjct: 169 YMSP------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 62 MAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRN 117
++ V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
+ P E + +S +SD+++ + E+ G P P
Sbjct: 169 YMSP------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIP 204
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 165
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 166 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 218
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 219 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 109 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 168
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 169 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 221
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 222 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 255
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 6/151 (3%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY 112
+ + T+ ++A L + K++IH+DI N L+ +KI+ G S
Sbjct: 119 TFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS---VHAPS 175
Query: 113 YKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLE 172
+ + L +LP E + + K D++ L +E+ G PF S ++ ++
Sbjct: 176 LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL-VGNPPFESASHNETYRRI- 233
Query: 173 SKKLCWKHSSKTPEYITSLHEKCIHPHPHQR 203
K+ K + P L K + +P +R
Sbjct: 234 -VKVDLKFPASVPTGAQDLISKLLRHNPSER 263
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 66 VALGLEHISDK-RLIHKDIAARNCLISSDLSVKI---SLSGLSKDTYQKEYYKYRNAILP 121
V GL ++ +K +++H+D+ N L++S +K+ +SG D+ + R+ + P
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSP 191
Query: 122 LRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVLSQLESKKLCWKHS 181
E + +S +SD+++ + E+ G P S + +L + +
Sbjct: 192 ------ERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPIGSGSGSMAIFEL-LDYIVNEPP 243
Query: 182 SKTPEYITSLH-----EKCIHPHPHQRPTFPSIVT 211
K P + SL KC+ +P +R ++
Sbjct: 244 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 197
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 198 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 251
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 252 QVFFRQRVSSEC-----------QHLIRWCLALRPSDRPTFEEI 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 197
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 198 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 251
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 252 QVFFRQRVSSEC-----------QHLIRWCLALRPSDRPTFEEI 284
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS----LSGLSKDTYQKEYYKYRNAIL 120
++ + L+++ ++R+IH+D+ N L+ V I+ + L ++T + +
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMA 182
Query: 121 PLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDDQVLSQLESKKLC 177
P + + +S D ++ +E+ +G P+ S +++ E+ +
Sbjct: 183 PEMFSSRKGA---GYSFAVDWWSLGVTAYELL-RGRRPYHIRSSTSSKEIVHTFETTVVT 238
Query: 178 WKHSSKTPEYITSLHEKCIHPHPHQRPTFPSIVTQLSDAM----CNDVN 222
+ S + + SL +K + P+P QR +QLSD ND+N
Sbjct: 239 Y--PSAWSQEMVSLLKKLLEPNPDQR------FSQLSDVQNFPYMNDIN 279
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 212
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 213 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 265
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 266 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 299
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 197
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 198 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 251
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 252 QVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 198
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 199 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 252
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 253 QVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 198
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 199 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 252
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 253 QVFFRQRVSSEC-----------QHLIRWCLALRPSDRPTFEEI 285
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 198
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 199 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 252
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 253 QVFFRQRVSSEC-----------QHLIRWCLALRPSDRPTFEEI 285
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 169
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 170 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 222
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 223 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 256
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 185
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 186 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 239 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 272
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 139 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 198
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 199 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIGG 252
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 253 QVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEI 285
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 212
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 213 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 265
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 266 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 299
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 110 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 169
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 170 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 222
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 223 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 256
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 138 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 197
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 198 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 250
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 251 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 284
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 184
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 185 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 237
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 238 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 271
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 145 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 204
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 205 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 257
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 258 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 291
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 170
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 171 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 223
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 224 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 257
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 170
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 171 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 223
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 224 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 257
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 185
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 186 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIRG 239
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 240 QVFFRQRVSXEC-----------QHLIRWCLALRPXDRPTFEEI 272
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 21/113 (18%)
Query: 58 QAVTMAYQVALGLEHISDKRLIHKDIAARNCL-ISSDL----------------SVKISL 100
Q MA+Q+ ++ + D +L H D+ N L ++SD S + +
Sbjct: 138 QVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRV 197
Query: 101 SGLSKDTYQKEYYKYRNAILPLR-WLPYEAVFDDEFSTKSDVYAYACLIWEIF 152
T+ E++ + I+ R + E + + +S DV++ C+I+E +
Sbjct: 198 VDFGSATFDHEHH---STIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 65 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 109
Q+ L +I + +IH+++ N I +VKI GL+K+ ++
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR 168
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 126 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 185
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 186 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 238
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + L C+ P RPTF I
Sbjct: 239 GQVFFRQ-------RVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 67/161 (41%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 111 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 170
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 171 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 223
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + SS+ I C+ P RPTF I
Sbjct: 224 GQVFFRQ---RVSSECQHLI----RWCLALRPSDRPTFEEI 257
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 125 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 184
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 185 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIRG 238
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 239 QVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEI 271
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 133 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 192
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 193 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIRG 246
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 247 QVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEI 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 24/164 (14%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 153 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 212
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF---PDLSDD 165
++ R P W+ Y + V++ L++++ G++PF ++
Sbjct: 213 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIRG 266
Query: 166 QVLSQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
QV + C L C+ P RPTF I
Sbjct: 267 QVFFRQRVSXEC-----------QHLIRWCLALRPSDRPTFEEI 299
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 220
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 267
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 28/44 (63%)
Query: 62 MAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 105
+ YQ+ ++++ L+H+D+ N L++++ VK++ GLS+
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 233
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 18/161 (11%)
Query: 53 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKISLSGLSKDTY 108
+L A + +QV + H + ++H+DI N LI + + L KDT
Sbjct: 158 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV 217
Query: 109 QKEYYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPDLSDDQVL 168
++ R P W+ Y + V++ L++++ G++PF + ++ +
Sbjct: 218 YTDFDGTR-VYSPPEWIRYHRY----HGRSAAVWSLGILLYDMVC-GDIPF-EHDEEIIR 270
Query: 169 SQLESKKLCWKHSSKTPEYITSLHEKCIHPHPHQRPTFPSI 209
Q+ ++ + L C+ P RPTF I
Sbjct: 271 GQVFFRQ-------RVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 59 AVTMAYQVAL------GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS-KDTYQKE 111
A TMA +A GL+ + H+DI ++N L+ ++L+ I+ GL+ K K
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 112 YYKYRNAILPLRWLPYEAV-----FDDEFSTKSDVYAYACLIWEIFNK 154
+ R++ E + F + + D+YA ++WE+ ++
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 133 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 190
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 237
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 233
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 148 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 205
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 252
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 137 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 194
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 233
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 198
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 245
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 130 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 187
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 234
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 186
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSR 198
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 208 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 265
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 312
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 220
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 267
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 157 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 214
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 261
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 165 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 222
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 269
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 167 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 224
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 271
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 134 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 191
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 238
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSD---LSVKISLSGLSKDTYQKEYYKYRN 117
T+ ++ L ++ + R+IH+D+ N ++ L KI G +K+ Q E
Sbjct: 126 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--E 183
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ L++L E + +++ D +++ L +E G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF 224
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 142 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 199
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 246
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 233
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGLSKDTYQKEYYKYRNAILPL 122
YQ+ L +I + H+DI +N L+ D +V K+ G +K + E + I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSR 186
Query: 123 RWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFP-DLSDDQVL 168
+ E +F ++++ DV++ C++ E+ G+ FP D DQ++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLV 233
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 69 GLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRNA-----ILPL 122
L H+ + ++IH+DI N L+ ++K+ G+S K R+A + P
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD-SIAKTRDAGCRPYMAPE 195
Query: 123 RWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFP 160
R P + + +SDV++ ++E+ G P+P
Sbjct: 196 RIDP--SASRQGYDVRSDVWSLGITLYELAT-GRFPYP 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 61 TMAYQVALGLEHISDKRLIHKDIAARNCLISSD---LSVKISLSGLSKDTYQKEYYKYRN 117
T+ ++ L ++ + R+IH+D+ N ++ L KI G +K+ Q E
Sbjct: 125 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--E 182
Query: 118 AILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
+ L++L E + +++ D +++ L +E G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 64 YQVALGLEHISDKRLIHKDIAARNCLISSDLSV---------KISLSGLSKDTYQKEYYK 114
YQ+ L +I + H+DI +N L+ V KI ++G + Y
Sbjct: 148 YQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY- 206
Query: 115 YRNAILPLRWLPYEAVFD-DEFSTKSDVYAYACLIWEIFNKGEMPFPDLSD-DQVLSQLE 172
YR E +F ++T D+++ C++ E+ +G+ FP S DQ++ ++
Sbjct: 207 YRAP---------ELIFGATNYTTNIDIWSTGCVMAELM-QGQPLFPGESGIDQLVEIIK 256
Query: 173 SKKLCWKHSSKT--PEYITSLHEKCIHPHPHQR 203
+ KT P Y+ + I PHP +
Sbjct: 257 VLGTPSREQIKTMNPNYMEHKFPQ-IRPHPFSK 288
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 15/138 (10%)
Query: 52 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS----SDLSVKISLSGLSK-- 105
R S + +A Q+ +E+I K IH+D+ N L+ +L I GL+K
Sbjct: 98 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF-GLAKKY 156
Query: 106 -DTYQKEYYKYR---NAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPFPD 161
D ++ YR N R+ E S + D+ + ++ FN G +P+
Sbjct: 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM-YFNLGSLPWQG 215
Query: 162 L---SDDQVLSQLESKKL 176
L + Q ++ KK+
Sbjct: 216 LKAATKRQKYERISEKKM 233
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 7/108 (6%)
Query: 57 SQAVTMAY--QVALGLEHISDKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKE 111
S+AV Y Q+ L + D +IH+D+ N L++S + VK+ G++ +
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
Query: 112 YYKYRNAILPLRWLPYEAVFDDEFSTKSDVYAYACLIWEIFNKGEMPF 159
P P E V + + DV+ +++ I G +PF
Sbjct: 188 LVAGGRVGTPHFMAP-EVVKREPYGKPVDVWGCGVILF-ILLSGCLPF 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,793,781
Number of Sequences: 62578
Number of extensions: 215724
Number of successful extensions: 1770
Number of sequences better than 100.0: 863
Number of HSP's better than 100.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 577
Number of HSP's gapped (non-prelim): 866
length of query: 223
length of database: 14,973,337
effective HSP length: 95
effective length of query: 128
effective length of database: 9,028,427
effective search space: 1155638656
effective search space used: 1155638656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)