RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1511
         (133 letters)



>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 261

 Score =  170 bits (431), Expect = 1e-54
 Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 2/132 (1%)

Query: 2   EMRKIKKVGIWPVGLVGGLKVEKPVVQDGKVIGFNSMWAPQRPYPIDMAGFAINLDLMKK 61
           EMR  + V +WPVGLVGGL+ E P VQDG+V+GF++ W P RP+P+DMAGFA+ L L+  
Sbjct: 132 EMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFHTAWEPSRPFPVDMAGFAVALPLLLD 191

Query: 62  NENVKFSFDVQKGYQESAILSKVLSSAQELEPLAENCTKVYVWHTRTTDPTFPYEVVLQK 121
             N +F     +G+ ES++LS ++   ++LEP A NCT+V VWHTRT  P    E  LQ+
Sbjct: 192 KPNAQFDSTAPRGHLESSLLSHLV-DPKDLEPRAANCTRVLVWHTRTEKPKMKQEEQLQR 250

Query: 122 NKKPASDRGIEV 133
            +   SD  IEV
Sbjct: 251 -QGRGSDPAIEV 261


>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1,  GlcAT-P
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score =  153 bits (389), Expect = 2e-48
 Identities = 58/134 (43%), Positives = 85/134 (63%), Gaps = 8/134 (5%)

Query: 2   EMRKIKKVGIWPVGLVGGLKVEKPVVQD-GKVIGFNSMWAPQRPYPIDMAGFAINLDLMK 60
           EMR  ++V +WPV  VGGL+ E P V   GKV+ + +++ P RP+ IDMAGFA+NL L+ 
Sbjct: 125 EMRSTRRVSVWPVAFVGGLRYEAPRVNGAGKVVRWKTVFDPHRPFAIDMAGFAVNLRLIL 184

Query: 61  KNENVKFSFD-VQKGYQESAILSKVLSSAQELEPLAENCTKVYVWHTRTTDPTFPYEVVL 119
           +     F    V+ GYQES++L ++++    LEP A NCTK+ VWHTRT  P     V++
Sbjct: 185 QRSQAYFKLRGVKGGYQESSLLRELVTLND-LEPKAANCTKILVWHTRTEKP-----VLV 238

Query: 120 QKNKKPASDRGIEV 133
            + KK  +D  +E+
Sbjct: 239 NEGKKGFTDPSVEI 252


>d2z9ia2 b.47.1.1 (A:6-226) Protease PepD {Mycobacterium
           tuberculosis [TaxId: 1773]}
          Length = 221

 Score = 24.2 bits (51), Expect = 6.0
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 6/40 (15%)

Query: 28  QDGKVIGFNSMWAPQRPYPIDMA------GFAINLDLMKK 61
            + +++G NS  A       D        GFAI +D  K+
Sbjct: 171 MNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKR 210


>d1lcya2 b.47.1.1 (A:6-210) Mitochondrial serine protease HtrA2,
           catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 205

 Score = 24.1 bits (51), Expect = 6.7
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 7/38 (18%)

Query: 25  PVV-QDGKVIGFNSMWAPQRPYPIDMAGFAINLDLMKK 61
           P+V  DG+VIG N+M             FAI  D +++
Sbjct: 171 PLVNLDGEVIGVNTMKVTAG------ISFAIPSDRLRE 202


>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain
           {Neurospora crassa [TaxId: 5141]}
          Length = 184

 Score = 23.7 bits (50), Expect = 7.4
 Identities = 6/20 (30%), Positives = 8/20 (40%)

Query: 14  VGLVGGLKVEKPVVQDGKVI 33
            G+V   KV+     D   I
Sbjct: 131 YGVVTLKKVKPESFTDAVKI 150


>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor
           {Bluebell (Scilla campanulata) [TaxId: 81759]}
          Length = 115

 Score = 23.4 bits (50), Expect = 7.7
 Identities = 6/21 (28%), Positives = 9/21 (42%)

Query: 102 YVWHTRTTDPTFPYEVVLQKN 122
             W + T      Y +VLQ +
Sbjct: 77  IRWSSGTKGSIGNYVLVLQPD 97


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0625    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 491,249
Number of extensions: 19812
Number of successful extensions: 71
Number of sequences better than 10.0: 1
Number of HSP's gapped: 69
Number of HSP's successfully gapped: 10
Length of query: 133
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 57
Effective length of database: 1,364,116
Effective search space: 77754612
Effective search space used: 77754612
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (22.5 bits)