BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15111
(93 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-H64
pdb|2FWZ|A Chain A, Structure Of Human Hsp90-alpha Bound To The Potent Water
Soluble Inhibitor Pu-h71
pdb|2H55|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-Dz8
pdb|3O0I|A Chain A, Structure Of The Human Hsp90-Alpha N-Domain Bound To The
Hsp90 Inhibitor Pu-H54
Length = 256
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Query: 14 GLIERVT--KNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS 71
GL+ R + T D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS
Sbjct: 13 GLVPRGSHMPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNS 72
Query: 72 SDV 74
SD
Sbjct: 73 SDA 75
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment
pdb|3FT8|A Chain A, Structure Of Hsp90 Bound With A Noval Fragment.
pdb|3HYY|A Chain A, Crystal Structure Of Hsp90 With Fragment 37-D04
pdb|3HYZ|A Chain A, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HYZ|B Chain B, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HZ1|A Chain A, Crystal Structure Of Hsp90 With Fragments 37-D04 And
42-C03
pdb|3HZ5|A Chain A, Crystal Structure Of Hsp90 With Fragment Z064
pdb|2XAB|A Chain A, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XAB|B Chain B, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XJX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDK|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDL|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDS|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHR|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHT|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XK2|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
GL+ R + M + + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHX|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
GL+ R + M + + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XJJ|B Chain B, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Query: 14 GLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
GL+ R + M + + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 GLVPRGSHMDQPMEEEE-----VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 67
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 236
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 41/45 (91%)
Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
+Q + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 22 DQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 66
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9-
Pent-9h-Purin-6-Ylamine
Length = 236
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 40/47 (85%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9 DQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 55
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule
Fragment
Length = 218
Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/45 (86%), Positives = 41/45 (91%)
Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
+Q + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 5 DQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 49
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 40/47 (85%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 25 DQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 71
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE8|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEI|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEJ|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 79.0 bits (193), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 25 DQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 70
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC3|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC4|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
Length = 264
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 45 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 83
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021
Length = 237
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 18 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 56
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UY7|A Chain A, Human Hsp90-alpha With
9-butyl-8-(4-methoxy-benzyl)-9h-purin-6-ylamine
pdb|1UY8|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3-Trimethoxy-Benzyl)-9h-Purin-6ylamine
pdb|1UY9|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,
5-Ylmethyl-9-Butyl-9h-Purin-6-Ylamine
pdb|1UYC|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(2,5-Dimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYD|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2-Chloro-3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYE|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYF|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYG|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYH|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYK|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,5-Ylmethyl-9-But
Yl-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYL|A Chain A, Structure-Activity Relationships In Purine-Based
Inhibitor Binding To Hsp90 Isoforms
pdb|2UWD|A Chain A, Inhibition Of The Hsp90 Molecular Chaperone In Vitro And
In Vivo By Novel, Synthetic, Potent Resorcinylic
Pyrazole, Isoxazole Amide Analogs
pdb|2VCI|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors:
Potential Therapeutic Agents For The Treatment Of
Cancer
pdb|2VCJ|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors:
Potential Therapeutic Agents For The Treatment Of
Cancer
pdb|2WI1|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|B Chain B, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI3|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI4|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI5|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI6|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI7|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|4FCP|A Chain A, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCP|B Chain B, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCQ|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
pdb|4FCR|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
Length = 236
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 17 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 55
>pdb|2CCS|A Chain A, Human Hsp90 With
4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3-
Yl)-Benzene-1,2-Diol
pdb|2CCT|A Chain A, Human Hsp90 With 5-(5-Chloro-2,4-Dihydroxy-Phenyl)-4-
Piperazin-1-Yl-2h-Pyrazole-3-Carboxylic Acid Ethylamide
pdb|2CCU|A Chain A, Human Hsp90 With 4-Chloro-6-(4-(4-(4-Methanesulphonyl-
Benzyl)-Pierazin-1-Yl)-1h-Pyrazol-3-Yl)-Benzene-1,
3-Diol
Length = 236
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 17 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3BMY|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3QTF|A Chain A, Design And Sar Of Macrocyclic Hsp90 Inhibitors With
Increased Metabolic Stability And Potent
Cell-Proliferation Activity
pdb|3R91|A Chain A, Macrocyclic Lactams As Potent Hsp90 Inhibitors With
Excellent Tumor Exposure And Extended Biomarker
Activity.
pdb|3R92|A Chain A, Discovery Of A Macrocyclic O-Aminobenzamide Hsp90
Inhibitor With Heterocyclic Tether That Shows Extended
Biomarker Activity And In Vivo Efficacy In A Mouse
Xenograft Model.
pdb|3RKZ|A Chain A, Discovery Of A Stable Macrocyclic O-Aminobenzamide Hsp90
Inhibitor Capable Of Significantly Decreasing Tumor
Volume In A Mouse Xenograft Model
Length = 226
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 30 QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
Q + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1 QPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 44
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE3|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE4|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE5|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE6|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE9|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEA|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEB|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEC|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YED|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEF|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|B Chain B, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEH|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 79.0 bits (193), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 33 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 70
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWO|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
Length = 230
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 27 ADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
+D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2 SDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 48
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|B Chain B, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BYH|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BYI|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BZ5|A Chain A, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
pdb|2BZ5|B Chain B, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
Length = 235
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/39 (97%), Positives = 38/39 (97%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 16 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDA 54
>pdb|2YI0|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI5|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI6|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-
4-Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI7|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors
Length = 229
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9 DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg
pdb|1YER|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "closed"
Conformation
pdb|1YES|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "open"
Conformation
pdb|1YET|A Chain A, Geldanamycin Bound To The Hsp90 Geldanamycin-Binding
Domain
Length = 228
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide
Tetrahydro-4h-Carbazol-4-One Bound To Hsp90
pdb|3MNR|P Chain P, Crystal Structure Of Benzamide Snx-1321 Bound To Hsp90
Length = 232
Score = 78.6 bits (192), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 17 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
(4-Hydroxyphenyl)morpholin- 4-Yl Methanone
pdb|4EGI|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
2-Amino-4-Ethylthio-6- Methyl-1,3,5-Triazine
pdb|4EGK|A Chain A, Human Hsp90-Alpha Atpase Domain Bound To Radicicol
Length = 232
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 13 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 50
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol
pdb|4EFT|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor 3-
Cyclohexyl-2-(6-Hydroxy-1h-Indazol-3-Yl)-Propionitrile
pdb|4EFU|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor 6-Hydroxy-
3-(3-Methyl-Benzyl)-1h-Indazole-5-Carboxylic Acid
Benzyl-Methyl-Amide
Length = 229
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 10 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B24|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B25|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor Ch4675194
pdb|3B26|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor Ro1127850
pdb|3B26|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor Ro1127850
pdb|3B27|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor Ro4919127
pdb|3B28|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor Ch5015765
pdb|3B28|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An
Inhibitor Ch5015765
pdb|3VHA|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHC|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHD|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
pdb|3VHD|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
Length = 229
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 10 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally
Bioavailable Pyrrolodinopyrimidine-Containing
Inhibitors Of Heat Shock Protein 90. Identification Of
Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3T0H|A Chain A, Structure Insights Into Mechanisms Of Atp Hydrolysis And
The Activation Of Human Hsp90
pdb|3T0Z|A Chain A, Hsp90 N-Terminal Domain Bound To Atp
pdb|3T10|A Chain A, Hsp90 N-Terminal Domain Bound To Acp
pdb|3T1K|A Chain A, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T1K|B Chain B, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T2S|A Chain A, Hsp90 N-Terminal Domain Bound To Ags
pdb|3T2S|B Chain B, Hsp90 N-Terminal Domain Bound To Ags
Length = 228
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A
pdb|3INX|A Chain A, Hsp90 N-Terminal Domain With Pochoxime B
Length = 228
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With
{4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
pdb|3HHU|B Chain B, Human Heat-Shock Protein 90 (Hsp90) In Complex With
{4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
Length = 224
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9 DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 54
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
In The Presence Of An The Inhibitor Ganetespib
pdb|3TUH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
In The Presence Of An The Inhibitor Ganetespib
Length = 209
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 39
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K98|B Chain B, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K99|A Chain A, Hsp90 N-Terminal Domain In Complex With
4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|B Chain B, Hsp90 N-Terminal Domain In Complex With
4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|C Chain C, Hsp90 N-Terminal Domain In Complex With
4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|D Chain D, Hsp90 N-Terminal Domain In Complex With
4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
Length = 232
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2 DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With
4-Chloro-6-{[(2r)-2-
(2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1,
3-Diol
Length = 251
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 32 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 69
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKO|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3HEK|A Chain A, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,
3- Difluoropyrrolidinium
pdb|3HEK|B Chain B, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,
3- Difluoropyrrolidinium
pdb|3R4N|A Chain A, Optimization Of Potent, Selective, And Orally
Bioavailable Pyrrolodinopyrimidine-Containing
Inhibitors Of Heat Shock Protein 90. Identification Of
Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4N|B Chain B, Optimization Of Potent, Selective, And Orally
Bioavailable Pyrrolodinopyrimidine-Containing
Inhibitors Of Heat Shock Protein 90. Identification Of
Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|A Chain A, Optimization Of Potent, Selective, And Orally
Bioavailable Pyrrolodinopyrimidine-Containing
Inhibitors Of Heat Shock Protein 90. Identification Of
Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|B Chain B, Optimization Of Potent, Selective, And Orally
Bioavailable Pyrrolodinopyrimidine-Containing
Inhibitors Of Heat Shock Protein 90. Identification Of
Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|A Chain A, Optimization Of Potent, Selective, And Orally
Bioavailable Pyrrolodinopyrimidine-Containing
Inhibitors Of Heat Shock Protein 90. Identification Of
Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|B Chain B, Optimization Of Potent, Selective, And Orally
Bioavailable Pyrrolodinopyrimidine-Containing
Inhibitors Of Heat Shock Protein 90. Identification Of
Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3RLP|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLP|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLQ|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLQ|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLR|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
pdb|3RLR|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
Length = 226
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 40/46 (86%)
Query: 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
D + VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 2 DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 47
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383
pdb|2QFO|B Chain B, Hsp90 Complexed With A143571 And A516383
pdb|2QG0|A Chain A, Hsp90 Complexed With A943037
pdb|2QG0|B Chain B, Hsp90 Complexed With A943037
Length = 207
Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 38
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322
pdb|2QF6|B Chain B, Hsp90 Complexed With A56322
pdb|2QF6|C Chain C, Hsp90 Complexed With A56322
pdb|2QF6|D Chain D, Hsp90 Complexed With A56322
pdb|2QG2|A Chain A, Hsp90 Complexed With A917985
pdb|3OW6|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone I
pdb|3OWB|A Chain A, Crystal Structure Of Hsp90 With Ver-49009
pdb|3OWD|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone
Ii
Length = 207
Score = 78.6 bits (192), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 1 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 38
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr
Length = 210
Score = 78.6 bits (192), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 4 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 41
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n-
Dimethylaminoethylamino-geldanamycin
Length = 215
Score = 78.6 bits (192), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/38 (100%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 9 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 46
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YJX|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK2|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKB|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKC|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKE|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKI|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKJ|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK9|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
Length = 209
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/38 (97%), Positives = 38/38 (100%)
Query: 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
+ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 3 METFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 40
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90
pdb|4GQT|B Chain B, N-Terminal Domain Of C. Elegans Hsp90
Length = 227
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 34 DGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
+ ETFAFQAEIAQLMSLIINTFYSNKEI+LRELISN+SD
Sbjct: 6 ENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASD 45
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3
(9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine)
Length = 220
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 38 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
TFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 13 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 48
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A
Pyrrolo-Pyrimidine Methoxypyridine Inhibitor
Length = 239
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/36 (97%), Positives = 36/36 (100%)
Query: 38 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
TFAFQAEIAQLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 18 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASD 53
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence
Of An The Inhibitor Biib021
pdb|3O6O|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence
Of An The Inhibitor Biib021
Length = 214
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/37 (97%), Positives = 36/37 (97%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETFAFQAEI QLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 4 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSD 40
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence
Of A Benzamide Derivative
pdb|3OPD|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence
Of A Benzamide Derivative
pdb|3OPD|C Chain C, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence
Of A Benzamide Derivative
pdb|3OMU|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence
Of A Thienopyrimidine Derivative
pdb|3OMU|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence
Of A Thienopyrimidine Derivative
Length = 231
Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/37 (97%), Positives = 36/37 (97%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETFAFQAEI QLMSLIINTFYSNKEIFLRELISNSSD
Sbjct: 21 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSD 57
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213
pdb|3Q5J|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of 17-Dmap- Geldanamycin
pdb|3Q5K|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of An Inhibitor
pdb|3Q5L|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|B Chain B, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|C Chain C, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|D Chain D, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3U67|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp90 From
Leishmania Major(Lmjf33.0312)in Complex With Adp
Length = 231
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 36/38 (94%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDV 74
ETFAFQAEI QLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 21 ETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDA 58
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
pdb|2XCM|B Chain B, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
Length = 214
Score = 72.8 bits (177), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
+ ++ ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSD
Sbjct: 1 HHAAATETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD 45
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|B Chain B, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|C Chain C, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
Length = 223
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/37 (94%), Positives = 36/37 (97%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSD
Sbjct: 12 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSD 48
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
8-(6-Bromo-
Benzo[1,
3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)-
Adenine
pdb|1ZWH|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radester Amine
pdb|2FXS|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radamide
Length = 240
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 24 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 60
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99
Ks- Aa
pdb|3C11|A Chain A, Yeast Hsp82 N-Terminal Domain-Geldanamycin Complex:
Effects Of Mutants 98-99 Ks-Aa
Length = 240
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 24 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 60
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The
N-Terminal Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 35/41 (85%)
Query: 33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
G ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 11 GMASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 51
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of
The N- Terminal Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 35/41 (85%)
Query: 33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
G ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 11 GMASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 51
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90
Chaperone In Complex With Geldanamycin
Length = 230
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 14 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 50
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed
With Geldanamycin
Length = 220
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH8|B Chain B, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH6|A Chain A, Structure Of The Tetragonal Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
Length = 220
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
Length = 223
Score = 68.6 bits (166), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETFAF A+I QLMSLIINTFYSNKEIFLRELISN+SD
Sbjct: 4 ETFAFNADIRQLMSLIINTFYSNKEIFLRELISNASD 40
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus
Of Yeast Hsp90.
pdb|2BRE|B Chain B, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus
Of Yeast Hsp90.
pdb|2VWC|A Chain A, Structure Of The Hsp90 Inhibitor Macbecin Bound To The
N- Terminus Of Yeast Hsp90
Length = 219
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|B Chain B, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|C Chain C, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|D Chain D, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone
Length = 213
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 3 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 39
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50
pdb|2BRC|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus
Of Yeast Hsp90.
pdb|2IWS|A Chain A, Radicicol Analogues Bound To The Atp Site Of Hsp90
pdb|2IWU|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90
pdb|2IWX|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90.
pdb|1AMW|A Chain A, Adp Binding Site In The Hsp90 Molecular Chaperone
pdb|2VW5|A Chain A, Structure Of The Hsp90 Inhibitor
7-O-Carbamoylpremacbecin Bound To The N- Terminus Of
Yeast Hsp90
pdb|2VW5|B Chain B, Structure Of The Hsp90 Inhibitor
7-O-Carbamoylpremacbecin Bound To The N- Terminus Of
Yeast Hsp90
pdb|2VW5|C Chain C, Structure Of The Hsp90 Inhibitor
7-O-Carbamoylpremacbecin Bound To The N- Terminus Of
Yeast Hsp90
pdb|2VW5|D Chain D, Structure Of The Hsp90 Inhibitor
7-O-Carbamoylpremacbecin Bound To The N- Terminus Of
Yeast Hsp90
pdb|2XD6|A Chain A, Hsp90 Complexed With A Resorcylic Acid Macrolactone.
pdb|2XX4|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX5|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp
pdb|2WEQ|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With
Geldanamycin
pdb|2WER|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With
Radicicol
pdb|2WER|B Chain B, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With
Radicicol
Length = 220
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRE++SN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLREIVSNASD 40
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CG9|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 677
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/37 (89%), Positives = 34/37 (91%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
ETF FQAEI QLMSLIINT YSNKEIFLRELISN+SD
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASD 40
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects
Of Mutants 168- 169 Ks-Aa
Length = 236
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 10 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 46
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1U2O|B Chain B, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1TBW|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TBW|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TC0|A Chain A, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC0|B Chain B, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC6|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1TC6|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1U0Z|A Chain A, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1U0Z|B Chain B, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1YSZ|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The
Er Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Neca
pdb|1YT0|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The
Er Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Adp
pdb|1YT1|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The
Er Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|1YT1|B Chain B, Crystal Structure Of The Unliganded Form Of Grp94, The
Er Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|2EXL|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2EXL|B Chain B, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2FYP|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2FYP|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2GFD|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GFD|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GQP|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2GQP|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2HCH|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2HCH|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2H8M|A Chain A, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2H8M|B Chain B, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2HG1|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|2HG1|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|3O2F|A Chain A, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
pdb|3O2F|B Chain B, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
Length = 236
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 10 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 46
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90
Chaperone Grp94 In Complex With The Specific Ligand
Neca
pdb|1QY8|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With Radicicol
pdb|1QYE|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With
2-chlorodideoxyadenosine
Length = 269
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 6 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 42
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex
With The Novel Ligand N-Propyl Carboxyamido Adenosine
pdb|1YT2|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The
Er Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n Apo Crystal
Length = 273
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 10 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 46
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The
Escherichia Coli Hsp90, Bound To Adp
Length = 235
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQN-IDFTGNQTQDLW 88
G ET FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD + + F DL+
Sbjct: 23 GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLY 77
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1U|B Chain B, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1V|A Chain A, Structure Of Full Length Grp94 With Adp Bound
pdb|2O1V|B Chain B, Structure Of Full Length Grp94 With Adp Bound
Length = 666
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 23 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 59
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of
Grp94
pdb|2O1W|B Chain B, Structure Of N-Terminal Plus Middle Domains (N+m) Of
Grp94
pdb|2O1W|C Chain C, Structure Of N-Terminal Plus Middle Domains (N+m) Of
Grp94
pdb|2O1W|D Chain D, Structure Of N-Terminal Plus Middle Domains (N+m) Of
Grp94
pdb|2O1W|E Chain E, Structure Of N-Terminal Plus Middle Domains (N+m) Of
Grp94
Length = 506
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
E FAFQAE+ ++M LIIN+ Y NKEIFLRELISN+SD
Sbjct: 23 EKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASD 59
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|C Chain C, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|D Chain D, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOQ|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
pdb|2IOQ|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
Length = 624
Score = 56.2 bits (134), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQN-IDFTGNQTQDLW 88
G ET FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD + + F DL+
Sbjct: 3 GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLY 57
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4S|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
Length = 559
Score = 55.8 bits (133), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQN-IDFTGNQTQDLW 88
G ET FQ+E+ QL+ L+I++ YSNKEIFLRELISN+SD + + F DL+
Sbjct: 3 GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLY 57
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf14_0417) In Complex With Amppn
Length = 272
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 34/41 (82%)
Query: 33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD 73
G VE + F+AE+ ++M +I+N+ Y++K++FLRELISN+SD
Sbjct: 21 GSPVEKYNFKAEVNKVMDIIVNSLYTDKDVFLRELISNASD 61
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEJ|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
pdb|3PEJ|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
Length = 281
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 30 QSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSD-VQNIDF 79
Q + +E+ +Q E+ +LM +I+N+ Y+ KE+FLRELISN++D ++ I F
Sbjct: 17 QGPTESMESHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRF 67
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant
pdb|2AKP|B Chain B, Hsp90 Delta24-n210 Mutant
Length = 186
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/16 (93%), Positives = 16/16 (100%)
Query: 58 SNKEIFLRELISNSSD 73
SNKEIFLRELISN+SD
Sbjct: 1 SNKEIFLRELISNASD 16
>pdb|1QAS|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAS|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta 1
pdb|1QAT|A Chain A, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
pdb|1QAT|B Chain B, 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodiesterase
Delta Complex With Samarium (Iii) Chloride
Length = 622
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 5 QSSGDAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFL 64
+ +G A+ L LIER + T A Q + DG + A+ SL Y + + L
Sbjct: 110 EEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD-GNAFSLAHRRVYQDMDQPL 168
Query: 65 RE-LISNSSDVQNID--FTGNQTQDLWCRSL 92
L+S+S + ++ TG + + + R+L
Sbjct: 169 SHYLVSSSHNTYLLEDQLTGPSSTEAYIRAL 199
>pdb|1DJG|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJG|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Lanthanum
pdb|1DJH|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJH|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Barium
pdb|1DJI|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJI|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Calcium
pdb|1DJW|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJW|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2-Methylene-1,2-Cyclic-
Monophosphonate
pdb|1DJX|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJX|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-1,4,5-Trisphosphate
pdb|1DJY|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJY|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-2,4,5-Trisphosphate
pdb|1DJZ|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|1DJZ|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Complexed With Inositol-4,5-Bisphosphate
pdb|2ISD|A Chain A, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
pdb|2ISD|B Chain B, Phosphoinositide-Specific Phospholipase C-Delta1 From Rat
Length = 624
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 5 QSSGDAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFL 64
+ +G A+ L LIER + T A Q + DG + A+ SL Y + + L
Sbjct: 112 EEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD-GNAFSLAHRRVYQDMDQPL 170
Query: 65 RE-LISNSSDVQNID--FTGNQTQDLWCRSL 92
L+S+S + ++ TG + + + R+L
Sbjct: 171 SHYLVSSSHNTYLLEDQLTGPSSTEAYIRAL 201
>pdb|1ZYN|A Chain A, Oxidized Structure Of The N-Terminal Domain Of
Salmonella Typhimurium Ahpf
pdb|1ZYN|B Chain B, Oxidized Structure Of The N-Terminal Domain Of
Salmonella Typhimurium Ahpf
pdb|1ZYP|A Chain A, Synchrotron Reduced Form Of The N-Terminal Domain Of
Salmonella Typhimurium Ahpf
pdb|1ZYP|B Chain B, Synchrotron Reduced Form Of The N-Terminal Domain Of
Salmonella Typhimurium Ahpf
Length = 202
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 16 IERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRE---LISNSS 72
+E++TK L+A S E AEIA+L + TF + + +R+ LI+N
Sbjct: 14 LEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKV--TFKEDNTLPVRKPSFLITNPG 71
Query: 73 DVQNIDFTGNQ 83
Q F G+
Sbjct: 72 SQQGPRFAGSP 82
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 26.9 bits (58), Expect = 3.2, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 16 IERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRE---LISNSS 72
+E++TK L+A S E AEIA+L + TF + + +R+ LI+N
Sbjct: 14 LEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKV--TFKEDNTLPVRKPSFLITNPG 71
Query: 73 DVQNIDFTGN 82
Q F G+
Sbjct: 72 SQQGPRFAGS 81
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.129 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,403,191
Number of Sequences: 62578
Number of extensions: 74090
Number of successful extensions: 211
Number of sequences better than 100.0: 75
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 138
Number of HSP's gapped (non-prelim): 75
length of query: 93
length of database: 14,973,337
effective HSP length: 60
effective length of query: 33
effective length of database: 11,218,657
effective search space: 370215681
effective search space used: 370215681
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)