Query psy15111
Match_columns 93
No_of_seqs 105 out of 473
Neff 2.7
Searched_HMMs 29240
Date Fri Aug 16 20:54:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15111.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15111hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ied_A Heat shock protein; HSP 99.8 1.5E-22 5E-27 158.5 1.3 55 33-88 21-76 (272)
2 3nmq_A Heat shock protein HSP 99.8 3.9E-21 1.3E-25 145.8 3.0 61 29-89 9-70 (239)
3 3peh_A Endoplasmin homolog; st 99.8 5.1E-20 1.7E-24 143.0 5.6 56 34-89 21-77 (281)
4 3o0i_A HSP90AA1 protein; HSP90 99.8 2.7E-20 9.2E-25 142.4 2.6 59 31-89 32-91 (256)
5 3t0h_A Heat shock protein HSP 99.8 6.7E-20 2.3E-24 136.7 3.4 62 28-89 1-63 (228)
6 1qy5_A Endoplasmin; GRP94, NEC 99.7 7.9E-19 2.7E-23 133.8 2.7 54 35-88 4-58 (269)
7 2cg9_A ATP-dependent molecular 99.7 1.1E-17 3.8E-22 141.8 1.6 53 37-89 4-57 (677)
8 2gqp_A Endoplasmin; GRP94, HSP 99.6 5.8E-17 2E-21 119.9 2.9 53 36-88 9-62 (236)
9 2o1u_A Endoplasmin; GRP94, HSP 99.6 2.2E-17 7.4E-22 139.6 -1.0 55 35-89 21-76 (666)
10 1y4s_A Chaperone protein HTPG; 99.6 1.1E-16 3.8E-21 132.6 1.3 54 36-89 4-58 (559)
11 1yc1_A HSP 86, heat shock prot 99.6 2.4E-16 8.2E-21 119.4 2.8 80 9-89 19-99 (264)
12 2wer_A ATP-dependent molecular 99.6 5E-16 1.7E-20 112.4 3.7 53 37-89 4-57 (220)
13 2ioq_A Chaperone protein HTPG; 99.6 2.4E-16 8.3E-21 132.0 2.3 53 37-89 5-58 (624)
14 2ior_A Chaperone protein HTPG; 99.4 8.4E-14 2.9E-18 102.5 2.8 52 35-86 23-75 (235)
15 1h7s_A PMS1 protein homolog 2; 81.9 0.44 1.5E-05 37.0 1.1 32 44-75 14-50 (365)
16 1b63_A MUTL; DNA mismatch repa 81.1 0.81 2.8E-05 34.7 2.3 22 54-75 19-40 (333)
17 3fv5_A DNA topoisomerase 4 sub 41.6 8 0.00027 27.5 0.9 15 61-75 19-33 (201)
18 1tdp_A Carnobacteriocin B2 imm 36.2 27 0.00092 24.2 2.8 27 45-72 5-35 (111)
19 1j2m_A CPI-17, 17-kDa PKC-pote 26.2 45 0.0015 22.6 2.5 22 48-70 72-93 (99)
20 3ttz_A DNA gyrase subunit B; p 20.7 30 0.001 24.6 0.9 12 64-75 36-47 (198)
21 4duh_A DNA gyrase subunit B; s 20.6 31 0.001 25.1 0.9 13 63-75 39-51 (220)
22 3h4l_A DNA mismatch repair pro 20.3 55 0.0019 25.5 2.3 21 55-75 21-41 (367)
No 1
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum}
Probab=99.84 E-value=1.5e-22 Score=158.52 Aligned_cols=55 Identities=40% Similarity=0.700 Sum_probs=50.2
Q ss_pred CCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111 33 GDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW 88 (93)
Q Consensus 33 ~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~ 88 (93)
..+.|+|+||+|++|||+||+|+|||||||||||||||||||| |+| ++++++.++
T Consensus 21 ~~~~e~~~Fqae~~~ll~li~~slYs~keiFlRELISNasDA~dK~r-~~l~~~~~~ 76 (272)
T 3ied_A 21 GSPVEKYNFKAEVNKVMDIIVNSLYTDKDVFLRELISNASDACDKKR-IILENNKLI 76 (272)
T ss_dssp TEECEEEECCHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ccccceechHHHHHHHHHHHHhhcCCCHHHHHHHHHHhhHHHHHHHH-HhccChhhh
Confidence 3456899999999999999999999999999999999999999 999 888877665
No 2
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1
Probab=99.81 E-value=3.9e-21 Score=145.83 Aligned_cols=61 Identities=62% Similarity=0.794 Sum_probs=52.9
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 29 NQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 29 ~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
++..+++.++|+||+|+++||++|+|+|||||+||||||||||+||+ |+||.+++++.+++
T Consensus 9 ~~~~~~~~e~~~Fqae~~~ll~ll~~~lYs~~~ifLRELIsNA~DA~~k~r~~~l~~~~~~~ 70 (239)
T 3nmq_A 9 VHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLD 70 (239)
T ss_dssp ---CTTCCEEEECCHHHHHHHHHHHHSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGT
T ss_pred cccccccceeEeehhhHHHHHHHHHHhccCCcHHHHHHHHhChHHHHHHHHHHhccCchhcc
Confidence 34444457899999999999999999999999999999999999999 99999888877654
No 3
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A*
Probab=99.79 E-value=5.1e-20 Score=142.98 Aligned_cols=56 Identities=38% Similarity=0.717 Sum_probs=52.0
Q ss_pred CcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 34 DGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 34 ~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
+..++|+||+|+++||++|+|+|||||+||||||||||+||+ |+||++++++.+++
T Consensus 21 ~~~e~~~Fqaei~~Ll~ll~~~lYsn~~ifLRELIsNA~DA~~k~r~~~l~d~~~~~ 77 (281)
T 3peh_A 21 ESMESHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLG 77 (281)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTTCGGGGT
T ss_pred hccceeeehHHHHHHHHHHHHhccCChHHHHHHHHhChHHHHHHHHHHhcCCchhcc
Confidence 455899999999999999999999999999999999999999 99999999887654
No 4
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A*
Probab=99.78 E-value=2.7e-20 Score=142.38 Aligned_cols=59 Identities=66% Similarity=0.825 Sum_probs=51.7
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 31 SSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 31 ~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
+..++.++++||+|+++||++|+|+|||||+||||||||||+||+ |+||.+++++.+++
T Consensus 32 ~~~~~~e~~~Fqaei~~Ll~ll~~~lYs~~~iflRELIsNA~DA~~k~r~~~l~~~~~~~ 91 (256)
T 3o0i_A 32 MEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD 91 (256)
T ss_dssp ----CCEEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGT
T ss_pred cccccceeEEeEeeHHHHHHHHHHhccCCcHHHHHHHHhChHHHHHHHHHHhccCchhcc
Confidence 344567999999999999999999999999999999999999999 99999888887764
No 5
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ...
Probab=99.77 E-value=6.7e-20 Score=136.70 Aligned_cols=62 Identities=65% Similarity=0.813 Sum_probs=51.8
Q ss_pred CCCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 28 DNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 28 d~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
|.++.++..++|.||+|+++||++++|+||+||++|||||||||+||+ |+||.+.+++.+++
T Consensus 1 ~~~~~~~~~~~~~Fq~ei~~ll~ll~~~lYs~~~~~lrELi~NA~DA~~k~r~~~~~~~~~~~ 63 (228)
T 3t0h_A 1 DQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLD 63 (228)
T ss_dssp -------CCEEEECCHHHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHTTCGGGGT
T ss_pred CcccccccccceEEEeeHHHHHHHHHHhhcCCcHHHHHHHHHCHHHHHHHHHhhhccCccccc
Confidence 345666777999999999999999999999999999999999999999 99999888887764
No 6
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=99.73 E-value=7.9e-19 Score=133.78 Aligned_cols=54 Identities=52% Similarity=0.772 Sum_probs=50.1
Q ss_pred cchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW 88 (93)
Q Consensus 35 ~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~ 88 (93)
..++|.||+++++||++|+|+|||||+||||||||||+||+ |+||++++++.++
T Consensus 4 ~~e~~~Fqaei~~Ll~li~~~lYsn~eifLrELIsNA~DA~~k~r~~~l~~~~~~ 58 (269)
T 1qy5_A 4 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL 58 (269)
T ss_dssp CEEEECCCHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTT
T ss_pred cccceeehhhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhhhhccCchhc
Confidence 45899999999999999999999999999999999999999 9999988877654
No 7
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.1e-17 Score=141.81 Aligned_cols=53 Identities=64% Similarity=0.828 Sum_probs=50.1
Q ss_pred hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
++|+||+|+++||+||+|+|||||+||||||||||+||+ |+||++++++.+..
T Consensus 4 e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~ 57 (677)
T 2cg9_A 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLE 57 (677)
T ss_dssp EEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTT
T ss_pred cceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhcc
Confidence 789999999999999999999999999999999999999 99999999887643
No 8
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A*
Probab=99.63 E-value=5.8e-17 Score=119.92 Aligned_cols=53 Identities=53% Similarity=0.794 Sum_probs=48.6
Q ss_pred chhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchh
Q psy15111 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLW 88 (93)
Q Consensus 36 ~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~ 88 (93)
.++++||+++++|+++++|+||++|++|||||||||.||+ |+||++..++.++
T Consensus 9 ~~~~~F~~ei~~L~~ll~~~lys~~~~~lrELI~NA~DA~ak~~~~~~~~~~~~ 62 (236)
T 2gqp_A 9 SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENAL 62 (236)
T ss_dssp TTEECCCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTT
T ss_pred ccccchhHhHHHHHHHHHHhhcCCchHHHHHHHHhHHHhhhhhhhhcccCcccc
Confidence 4789999999999999999999999999999999999999 8999987766543
No 9
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=99.62 E-value=2.2e-17 Score=139.65 Aligned_cols=55 Identities=51% Similarity=0.747 Sum_probs=39.4
Q ss_pred cchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 35 ~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
+.|+|+||+|+++||++|+|+|||||+||||||||||+||+ |+||++.+++.+.+
T Consensus 21 ~~e~~~Fqaei~~Ll~li~~sLYsn~eifLRELIsNA~DA~dk~r~~~l~~~~~~~ 76 (666)
T 2o1u_A 21 MSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALA 76 (666)
T ss_dssp -------------CCSSSTTTTSSSCTTHHHHHHHHHHHHHHHHHHHTTSCTTSSS
T ss_pred cccceehHHhHHHHHHHHHHhccCCchHHHHHHHhhHHHHHHHHHHHhccCchhcc
Confidence 44899999999999999999999999999999999999999 99999998877653
No 10
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=99.60 E-value=1.1e-16 Score=132.62 Aligned_cols=54 Identities=52% Similarity=0.785 Sum_probs=50.2
Q ss_pred chhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 36 VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 36 ~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
.++|+||+|+++||++|+|+|||||++|||||||||+||+ |+||.+++++.+..
T Consensus 4 ~e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~ 58 (559)
T 1y4s_A 4 QETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYE 58 (559)
T ss_dssp CEEEECCTTHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGC
T ss_pred ccceeeeecHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhHhHHHhhccCchhcc
Confidence 3789999999999999999999999999999999999999 99999988877653
No 11
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=99.60 E-value=2.4e-16 Score=119.41 Aligned_cols=80 Identities=53% Similarity=0.645 Sum_probs=51.4
Q ss_pred chhhhhhhhhhhcccccccCCCCCCCcchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccch
Q psy15111 9 DAITLGLIERVTKNTTLMADNQSSGDGVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDL 87 (93)
Q Consensus 9 ~~~~~~~~~~~~~~~t~~~d~~~~~~~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~ 87 (93)
...+--++++..+. .+..++++...+.+++.||+++++|+++++|++|++|++||||||+||.||+ |+||.+..++.+
T Consensus 19 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~~F~~ei~~Ll~ll~~~lys~~~~~lrELI~NA~DA~ak~r~~~l~~~~~ 97 (264)
T 1yc1_A 19 QQMGRDLYDDDDKD-RWGSDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSK 97 (264)
T ss_dssp -------------------------CCEEEEECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hhhhhHHHHHHHHH-hhcCCCccccccceeEEehHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhhhhhhhccCccc
Confidence 33444556655442 3455555555667999999999999999999999999999999999999999 899998777666
Q ss_pred hh
Q psy15111 88 WC 89 (93)
Q Consensus 88 ~~ 89 (93)
++
T Consensus 98 ~~ 99 (264)
T 1yc1_A 98 LD 99 (264)
T ss_dssp GG
T ss_pred cC
Confidence 54
No 12
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A
Probab=99.59 E-value=5e-16 Score=112.41 Aligned_cols=53 Identities=60% Similarity=0.815 Sum_probs=49.3
Q ss_pred hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
|+++||+++++|+++++|+||+|+++||||||+||.||. +.||.+..++.+++
T Consensus 4 ~~~~f~~~~~~l~~ll~~~lys~~~~~lrELI~NA~DA~a~~~~~~~~~~~~~~ 57 (220)
T 2wer_A 4 ETFEFQAEITQLMSLIINTVYSNKEIFLREIVSNASDALDKIRYKSLSDPKQLE 57 (220)
T ss_dssp EEEECCHHHHHHHHHHHHHCCSSTTHHHHHHHHHHHHHHHHHHHHHTTCGGGGG
T ss_pred cceeeeecHHHHHHHHHHhccCCchHHHHHHHHhHHHHHHHHHhhcccCchhcc
Confidence 789999999999999999999999999999999999999 89998888776654
No 13
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=99.59 E-value=2.4e-16 Score=132.00 Aligned_cols=53 Identities=53% Similarity=0.809 Sum_probs=40.4
Q ss_pred hhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccchhh
Q psy15111 37 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQDLWC 89 (93)
Q Consensus 37 et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~~~~ 89 (93)
|+|+||+|+++||++|+|+|||||++|||||||||+||+ |+||.+.+++.+.+
T Consensus 5 e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~ 58 (624)
T 2ioq_A 5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYE 58 (624)
T ss_dssp ----------CCHHHHHHHHSSCTTHHHHHHHHHHHHHHHHHHHHHHTSTTTTT
T ss_pred cceeeeecHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhhhhHHhhccCccccc
Confidence 789999999999999999999999999999999999999 99999988877654
No 14
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli}
Probab=99.40 E-value=8.4e-14 Score=102.49 Aligned_cols=52 Identities=54% Similarity=0.825 Sum_probs=47.3
Q ss_pred cchhhhHHHHHHHHHHHHHHhhcCChhHHHHHHhhchhhhh-hhhhhccCccc
Q psy15111 35 GVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDVQ-NIDFTGNQTQD 86 (93)
Q Consensus 35 ~~et~~FQaei~~LL~liinSLYSnKEIFLRELISNASDAl-k~R~~~~~~~~ 86 (93)
+.|++.||+++++|++++++.+|+++++||||||+||.||. ++||....++.
T Consensus 23 ~~e~~~f~~~i~~L~~~l~~~lys~~~~~lrELI~NA~DA~~~~r~~~~~~~~ 75 (235)
T 2ior_A 23 GQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPD 75 (235)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHTSCGG
T ss_pred ccccEEeehhHHHHHHHHHHhhcCCHHHHHHHHHhCHHHHHHHHHhhhccCcc
Confidence 44889999999999999999999999999999999999999 89998666544
No 15
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=81.90 E-value=0.44 Score=37.03 Aligned_cols=32 Identities=22% Similarity=0.297 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHhhcCCh-----hHHHHHHhhchhhhh
Q psy15111 44 EIAQLMSLIINTFYSNK-----EIFLRELISNSSDVQ 75 (93)
Q Consensus 44 ei~~LL~liinSLYSnK-----EIFLRELISNASDAl 75 (93)
.|++|-+.++|.+++.. .-+++|||+||.||-
T Consensus 14 ~I~~L~~~~~~~i~agevi~~~~~vl~eLv~NAiDA~ 50 (365)
T 1h7s_A 14 AIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAG 50 (365)
T ss_dssp ---------------CEEECCHHHHHHHHHHHHHHTT
T ss_pred hhccCCHHHHHHhcCCCchhhHHHHHHHHHHHHHHCC
Confidence 47788888888888754 889999999999986
No 16
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A*
Probab=81.15 E-value=0.81 Score=34.68 Aligned_cols=22 Identities=23% Similarity=0.314 Sum_probs=19.0
Q ss_pred HhhcCChhHHHHHHhhchhhhh
Q psy15111 54 NTFYSNKEIFLRELISNSSDVQ 75 (93)
Q Consensus 54 nSLYSnKEIFLRELISNASDAl 75 (93)
..+..+...+++|||+||.||.
T Consensus 19 gevi~~~~~~v~ELi~NaidA~ 40 (333)
T 1b63_A 19 GEVVERPASVVKELVENSLDAG 40 (333)
T ss_dssp HHHCSSHHHHHHHHHHHHHHTT
T ss_pred CCchhCHHHHHHHHHHHHHHCC
Confidence 3455789999999999999997
No 17
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=41.65 E-value=8 Score=27.49 Aligned_cols=15 Identities=33% Similarity=0.341 Sum_probs=12.4
Q ss_pred hHHHHHHhhchhhhh
Q psy15111 61 EIFLRELISNSSDVQ 75 (93)
Q Consensus 61 EIFLRELISNASDAl 75 (93)
---++|||.||-||.
T Consensus 19 ~~~v~Elv~NsiDa~ 33 (201)
T 3fv5_A 19 NHLGQEVIDNSVDEA 33 (201)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHH
Confidence 346789999999994
No 18
>1tdp_A Carnobacteriocin B2 immunity protein; four-helix bundle, antimicrobial protein; NMR {Carnobacterium maltaromaticum} SCOP: a.29.8.1
Probab=36.19 E-value=27 Score=24.23 Aligned_cols=27 Identities=22% Similarity=0.438 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhhcCChhH----HHHHHhhchh
Q psy15111 45 IAQLMSLIINTFYSNKEI----FLRELISNSS 72 (93)
Q Consensus 45 i~~LL~liinSLYSnKEI----FLRELISNAS 72 (93)
..+|++.|... |+|+|| +||++|=+..
T Consensus 5 ~q~L~~~lS~A-Y~DpeVk~~p~Lr~~lf~~A 35 (111)
T 1tdp_A 5 SQTLYLNLSEA-YKDPEVKANEFLSKLVVQCA 35 (111)
T ss_dssp HHHHHHHHHHH-HTCHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCCHhhhcCHHHHHHHHHHH
Confidence 35688888876 999987 8999986544
No 19
>1j2m_A CPI-17, 17-kDa PKC-potentiated inhibitory protein of PP1; helix bundle, protein binding; NMR {Sus scrofa} SCOP: a.165.1.1 PDB: 2rlt_A* 1j2n_A 1k5o_A
Probab=26.19 E-value=45 Score=22.64 Aligned_cols=22 Identities=23% Similarity=0.455 Sum_probs=16.7
Q ss_pred HHHHHHHhhcCChhHHHHHHhhc
Q psy15111 48 LMSLIINTFYSNKEIFLRELISN 70 (93)
Q Consensus 48 LL~liinSLYSnKEIFLRELISN 70 (93)
|-.++ ..-|+..|-|+.||++.
T Consensus 72 LqelL-~~C~~ptE~FI~eLL~r 93 (99)
T 1j2m_A 72 IQGLL-KSCTNPTENFVQELLVK 93 (99)
T ss_dssp HHHHH-HTTSCCCHHHHHHHHHH
T ss_pred HHHHH-HHcCCCHHHHHHHHHHH
Confidence 33444 45699999999999974
No 20
>3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A*
Probab=20.72 E-value=30 Score=24.57 Aligned_cols=12 Identities=33% Similarity=0.473 Sum_probs=10.2
Q ss_pred HHHHhhchhhhh
Q psy15111 64 LRELISNSSDVQ 75 (93)
Q Consensus 64 LRELISNASDAl 75 (93)
++|||.||.|+-
T Consensus 36 v~Elv~NsiD~~ 47 (198)
T 3ttz_A 36 VWEIVDNSIDEA 47 (198)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhHH
Confidence 479999999963
No 21
>4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A*
Probab=20.58 E-value=31 Score=25.08 Aligned_cols=13 Identities=23% Similarity=0.383 Sum_probs=11.0
Q ss_pred HHHHHhhchhhhh
Q psy15111 63 FLRELISNSSDVQ 75 (93)
Q Consensus 63 FLRELISNASDAl 75 (93)
-++|||.||.|+.
T Consensus 39 lv~ElvdNsiDea 51 (220)
T 4duh_A 39 MVFEVVDNAIDEA 51 (220)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3589999999984
No 22
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae}
Probab=20.31 E-value=55 Score=25.50 Aligned_cols=21 Identities=24% Similarity=0.373 Sum_probs=16.7
Q ss_pred hhcCChhHHHHHHhhchhhhh
Q psy15111 55 TFYSNKEIFLRELISNSSDVQ 75 (93)
Q Consensus 55 SLYSnKEIFLRELISNASDAl 75 (93)
.+-....--+.|||.||-||-
T Consensus 21 evi~~~~~vv~eLv~NaiDA~ 41 (367)
T 3h4l_A 21 QVITDLTTAVKELVDNSIDAN 41 (367)
T ss_dssp HHCCSHHHHHHHHHHHHHHTT
T ss_pred CcccCHHHHHHHHHHHHHHCC
Confidence 334566678899999999997
Done!