Query psy15112
Match_columns 73
No_of_seqs 111 out of 433
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 20:55:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q6m_A Heat shock protein HSP 99.3 2.5E-13 8.7E-18 103.8 2.2 65 8-73 376-442 (448)
2 3hjc_A Heat shock protein 83-1 98.6 1.2E-08 4.2E-13 77.8 1.0 37 7-43 391-428 (444)
3 2o1u_A Endoplasmin; GRP94, HSP 98.1 7.3E-07 2.5E-11 70.7 2.2 36 7-42 628-664 (666)
4 1sf8_A Chaperone protein HTPG; 98.1 7E-07 2.4E-11 58.1 1.1 29 7-35 97-126 (126)
5 2cge_A ATP-dependent molecular 97.9 3E-06 1E-10 63.8 1.1 32 7-38 373-405 (405)
6 2cg9_A ATP-dependent molecular 97.8 3.9E-06 1.3E-10 66.8 0.7 32 7-38 645-677 (677)
7 2ioq_A Chaperone protein HTPG; 96.8 0.00029 9.9E-09 55.5 1.1 28 7-34 595-623 (624)
8 3m20_A 4-oxalocrotonate tautom 56.5 4.2 0.00014 21.8 1.1 27 16-42 8-35 (62)
9 1otf_A 4-oxalocrotonate tautom 55.3 3.6 0.00012 21.4 0.6 29 14-42 7-36 (62)
10 3abf_A 4-oxalocrotonate tautom 54.3 5.5 0.00019 20.8 1.3 29 14-42 8-37 (64)
11 2opa_A Probable tautomerase YW 52.7 4.2 0.00014 21.1 0.7 29 14-42 7-36 (61)
12 3ry0_A Putative tautomerase; o 51.3 4.5 0.00016 21.7 0.7 29 14-42 7-36 (65)
13 1pgy_A SWA2P; UBA, ubiquitin, 48.0 6.1 0.00021 21.5 0.8 14 28-41 10-23 (47)
14 2x4k_A 4-oxalocrotonate tautom 44.8 6.7 0.00023 20.1 0.7 29 14-42 10-39 (63)
15 1f8v_D Mature capsid protein g 42.2 17 0.00059 19.1 2.0 18 24-41 2-19 (40)
16 3mb2_A 4-oxalocrotonate tautom 41.2 7.9 0.00027 21.2 0.6 29 14-42 8-37 (72)
17 3ej9_A Alpha-subunit of trans- 40.9 8.1 0.00028 21.6 0.7 29 14-42 8-37 (76)
18 3m21_A Probable tautomerase HP 39.5 8.2 0.00028 20.8 0.5 26 17-42 13-39 (67)
19 2xcz_A Possible ATLS1-like lig 30.0 24 0.00082 20.6 1.6 28 15-42 65-93 (115)
20 3b64_A Macrophage migration in 29.6 22 0.00077 20.7 1.4 27 16-42 66-93 (112)
21 2wkb_A Macrophage migration in 28.4 23 0.00077 21.3 1.3 28 15-42 65-93 (125)
22 2z2q_B Coat protein gamma; wil 28.4 20 0.00069 19.2 0.9 17 24-40 2-18 (44)
23 3mlc_A FG41 malonate semialdeh 28.0 32 0.0011 21.3 1.9 30 14-43 7-37 (136)
24 1gyx_A YDCE, B1461, hypothetic 26.1 18 0.00063 19.9 0.5 29 14-42 7-37 (76)
25 3fwu_A Macrophage migration in 25.6 28 0.00097 21.5 1.4 26 17-42 88-114 (133)
26 3t5s_A Gilaa.00834.A, macropha 25.3 26 0.00087 21.8 1.1 27 16-42 87-114 (135)
27 1hfo_A Migration inhibitory fa 24.8 21 0.00071 20.8 0.6 28 15-42 64-92 (113)
28 1uiz_A MIF, macrophage migrati 24.1 21 0.00073 20.9 0.5 28 15-42 65-93 (115)
29 1nov_D Nodamura virus coat pro 22.9 26 0.00089 18.7 0.7 17 24-40 2-18 (44)
30 2os5_A Acemif; macrophage migr 22.8 23 0.00079 21.0 0.5 28 15-42 65-93 (119)
31 3fwt_A Macrophage migration in 21.6 28 0.00097 21.4 0.8 27 16-42 87-114 (133)
32 1x57_A Endothelial differentia 20.4 80 0.0027 17.1 2.5 20 15-34 2-23 (91)
No 1
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A
Probab=99.33 E-value=2.5e-13 Score=103.78 Aligned_cols=65 Identities=49% Similarity=0.679 Sum_probs=29.8
Q ss_pred hhhhceeecCCCCCc-hhHHHHHHHHHHccCCCCCCCCCCCCcc-cccCCCCCCCCCCcccccccccC
Q psy15112 8 LAIGKSQELDFWLEN-LIHAARIHRMIKLGLGIEDDDEPAPSEE-VKSEELPAADADTEDASRMEEVD 73 (73)
Q Consensus 8 ~~~tAlL~SGF~led-~~fA~RI~~ml~~~L~i~~~~~~~e~~~-~~~~e~p~~e~~~~~~s~~EevD 73 (73)
|-++|+|++||+|+| +.|++||++||++||||+++++.++++. .++.+.||++.++ +.++|++||
T Consensus 376 Lyd~AlL~~G~~l~DP~~f~~ri~~ll~~~L~id~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 442 (448)
T 3q6m_A 376 LYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGDD-DTSRMEEVD 442 (448)
T ss_dssp HHHHHHHHTTCCCSCHHHHHHHHHHHHHHTTC------------------------------------
T ss_pred HHHhHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCccccccccccccccCCCCCCCCCc-chhhhhhhc
Confidence 568999999999999 9999999999999999998766544332 3456668888764 899999986
No 2
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major}
Probab=98.55 E-value=1.2e-08 Score=77.81 Aligned_cols=37 Identities=38% Similarity=0.454 Sum_probs=30.2
Q ss_pred chhhhceeecCCCCCc-hhHHHHHHHHHHccCCCCCCC
Q psy15112 7 DLAIGKSQELDFWLEN-LIHAARIHRMIKLGLGIEDDD 43 (73)
Q Consensus 7 ~~~~tAlL~SGF~led-~~fA~RI~~ml~~~L~i~~~~ 43 (73)
.|-++|+|++||+++| +.|++||++||+++|||++++
T Consensus 391 lLyd~AlL~~G~~ledp~~f~~ri~~ll~~~l~~~~~~ 428 (444)
T 3hjc_A 391 LLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEE 428 (444)
T ss_dssp HHHHHHHHHHTCCCSCHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCCCccc
Confidence 3568999999999999 999999999999999999863
No 3
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=98.14 E-value=7.3e-07 Score=70.74 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=31.4
Q ss_pred chhhhceeecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 7 DLAIGKSQELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 7 ~~~~tAlL~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
.|-++|+|++||+++| +.|++||++||+++|+++++
T Consensus 628 ~l~d~All~~G~~~~dp~~f~~r~~~ll~~~l~~~~~ 664 (666)
T 2o1u_A 628 VLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPD 664 (666)
T ss_dssp HHHHHHHHHHTCCCSCHHHHHHHHHHHHHTTSCC---
T ss_pred HHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcCCCcc
Confidence 4669999999999999 99999999999999999865
No 4
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1
Probab=98.10 E-value=7e-07 Score=58.05 Aligned_cols=29 Identities=14% Similarity=-0.022 Sum_probs=26.6
Q ss_pred chhhhceeecCCCCCc-hhHHHHHHHHHHc
Q psy15112 7 DLAIGKSQELDFWLEN-LIHAARIHRMIKL 35 (73)
Q Consensus 7 ~~~~tAlL~SGF~led-~~fA~RI~~ml~~ 35 (73)
.+-|+|+|++||+++| ..|++|||+||++
T Consensus 97 lLyd~AlL~~G~~leDp~~F~~Ri~~ll~~ 126 (126)
T 1sf8_A 97 LLLDQALLAERGTLEDPNLFIRRMNQLLVS 126 (126)
T ss_dssp HHHHHHHHHHHSCCSSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCcccHHHHHHHHHHHHhC
Confidence 4679999999999999 9999999999974
No 5
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae}
Probab=97.87 E-value=3e-06 Score=63.81 Aligned_cols=32 Identities=34% Similarity=0.375 Sum_probs=29.7
Q ss_pred chhhhceeecCCCCCc-hhHHHHHHHHHHccCC
Q psy15112 7 DLAIGKSQELDFWLEN-LIHAARIHRMIKLGLG 38 (73)
Q Consensus 7 ~~~~tAlL~SGF~led-~~fA~RI~~ml~~~L~ 38 (73)
.|-++|+|++||+++| +.|++||++||+++||
T Consensus 373 ~Lyd~AlL~~G~~~~dp~~f~~r~~~ll~~~l~ 405 (405)
T 2cge_A 373 LLYETALLTSGFSLDEPTSFASRINRLISLGLN 405 (405)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCcccHHHHHHHHHHHHHHhcC
Confidence 4679999999999999 9999999999998876
No 6
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.80 E-value=3.9e-06 Score=66.76 Aligned_cols=32 Identities=34% Similarity=0.375 Sum_probs=29.8
Q ss_pred chhhhceeecCCCCCc-hhHHHHHHHHHHccCC
Q psy15112 7 DLAIGKSQELDFWLEN-LIHAARIHRMIKLGLG 38 (73)
Q Consensus 7 ~~~~tAlL~SGF~led-~~fA~RI~~ml~~~L~ 38 (73)
.|-++|+|++||+++| +.|++|||+||+++||
T Consensus 645 ~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l~ 677 (677)
T 2cg9_A 645 LLYETALLTSGFSLDEPTSFASRINRLISLGLN 677 (677)
T ss_dssp HHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSCC
T ss_pred HHHHHHHHhCCCCccCHHHHHHHHHHHHHHhcC
Confidence 4679999999999999 9999999999998886
No 7
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=96.83 E-value=0.00029 Score=55.48 Aligned_cols=28 Identities=14% Similarity=0.003 Sum_probs=26.1
Q ss_pred chhhhceeecCCCCCc-hhHHHHHHHHHH
Q psy15112 7 DLAIGKSQELDFWLEN-LIHAARIHRMIK 34 (73)
Q Consensus 7 ~~~~tAlL~SGF~led-~~fA~RI~~ml~ 34 (73)
.|-++|||++||.++| +.|++||++||+
T Consensus 595 ~L~d~All~~g~~l~dp~~f~~r~~~~l~ 623 (624)
T 2ioq_A 595 LLLDQALLAERGTLEDPNLFIRRMNQLLV 623 (624)
T ss_dssp HHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCccCHHHHHHHHHHHhh
Confidence 4668999999999999 999999999996
No 8
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=56.46 E-value=4.2 Score=21.78 Aligned_cols=27 Identities=7% Similarity=0.052 Sum_probs=24.5
Q ss_pred cCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 16 LDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 16 SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
.|++.+. +.++.+|.+.+..-||++.+
T Consensus 8 ~grt~eqK~~L~~~it~~~~~~lg~~~~ 35 (62)
T 3m20_A 8 PKLDVGKKREFVERLTSVAAEIYGMDRS 35 (62)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 7999999 99999999999988888865
No 9
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=55.26 E-value=3.6 Score=21.44 Aligned_cols=29 Identities=7% Similarity=-0.173 Sum_probs=24.8
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
+..|.+.+. +.++..|+..+..-||++.+
T Consensus 7 ~~~grs~e~k~~l~~~i~~~l~~~lg~p~~ 36 (62)
T 1otf_A 7 IIEGRTDEQKETLIRQVSEAMANSLDAPLE 36 (62)
T ss_dssp EESCCCHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred EcCCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 456888888 99999999999988888754
No 10
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=54.30 E-value=5.5 Score=20.85 Aligned_cols=29 Identities=17% Similarity=-0.096 Sum_probs=24.6
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
+..|.+.+. +.|+.+|.+.+..-||++.+
T Consensus 8 ~~~g~s~eqk~~l~~~lt~~l~~~lg~~~~ 37 (64)
T 3abf_A 8 LLEGRPPEKKRELVRRLTEMASRLLGEPYE 37 (64)
T ss_dssp EETTCCHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 456888888 99999999999988998754
No 11
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=52.73 E-value=4.2 Score=21.14 Aligned_cols=29 Identities=10% Similarity=-0.020 Sum_probs=24.6
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
+..|.+.+. +.++.+|.+.+..-||++.+
T Consensus 7 ~~~grs~eqk~~l~~~i~~~l~~~lg~~~~ 36 (61)
T 2opa_A 7 MLEGRTDEQKRNLVEKVTEAVKETTGASEE 36 (61)
T ss_dssp EESCCCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred EcCCCCHHHHHHHHHHHHHHHHHHhCcCcC
Confidence 456888888 99999999999988888754
No 12
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=51.27 E-value=4.5 Score=21.69 Aligned_cols=29 Identities=7% Similarity=-0.122 Sum_probs=25.0
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
|..|.+.+. +.++..|++.+..-||++.+
T Consensus 7 ~~~Grs~eqk~~L~~~it~~~~~~lg~p~~ 36 (65)
T 3ry0_A 7 LLEGRSPQEVAALGEALTAAAHETLGTPVE 36 (65)
T ss_dssp EESCCCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred EcCCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 457999989 99999999999988888754
No 13
>1pgy_A SWA2P; UBA, ubiquitin, auxilin, ubiquitin-associated domain, protein binding; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=48.05 E-value=6.1 Score=21.48 Aligned_cols=14 Identities=50% Similarity=0.928 Sum_probs=11.5
Q ss_pred HHHHHHHccCCCCC
Q psy15112 28 RIHRMIKLGLGIED 41 (73)
Q Consensus 28 RI~~ml~~~L~i~~ 41 (73)
-|-|+|.+||+|+.
T Consensus 10 EiAkLMSLGl~id~ 23 (47)
T 1pgy_A 10 EIARLMSLGLSIEE 23 (47)
T ss_dssp HHHHHHHHCCCSHH
T ss_pred HHHHHHHccCChhh
Confidence 36789999999874
No 14
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=44.78 E-value=6.7 Score=20.13 Aligned_cols=29 Identities=7% Similarity=-0.107 Sum_probs=24.3
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
+..|.+.+. +.++..|++.+..-||++.+
T Consensus 10 ~~~g~s~e~k~~l~~~l~~~l~~~lg~p~~ 39 (63)
T 2x4k_A 10 LLEGRSDEQLKNLVSEVTDAVEKTTGANRQ 39 (63)
T ss_dssp EESCCCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred EcCCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 456888888 99999999999988888754
No 15
>1f8v_D Mature capsid protein gamma; nodavirus, coat protein, nucleoprotein, protein-RNA interactions, RNA duplex, RNA CAGE, gamma polypeptide; 3.00A {Pariacato virus} SCOP: b.121.4.4
Probab=42.17 E-value=17 Score=19.07 Aligned_cols=18 Identities=11% Similarity=-0.001 Sum_probs=14.3
Q ss_pred hHHHHHHHHHHccCCCCC
Q psy15112 24 IHAARIHRMIKLGLGIED 41 (73)
Q Consensus 24 ~fA~RI~~ml~~~L~i~~ 41 (73)
+|-.|+-+++|.+|+.-.
T Consensus 2 ~mWErVk~ilks~l~~aS 19 (40)
T 1f8v_D 2 KFWEGVLRVLNQISGTLS 19 (40)
T ss_dssp HHHHHHHHHHHHTCCC--
T ss_pred cHHHHHHHHHHHHHHHHh
Confidence 688999999999998544
No 16
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=41.25 E-value=7.9 Score=21.21 Aligned_cols=29 Identities=7% Similarity=-0.167 Sum_probs=24.9
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
+..|.+.+. +.++.+|++.+..-||++.+
T Consensus 8 ~~~grs~eqK~~L~~~it~~l~~~lg~p~~ 37 (72)
T 3mb2_A 8 MLEGRSTEQKAELARALSAAAAAAFDVPLA 37 (72)
T ss_dssp EESCCCHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred EcCCCCHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 446899989 99999999999988888754
No 17
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=40.86 E-value=8.1 Score=21.64 Aligned_cols=29 Identities=17% Similarity=0.051 Sum_probs=24.9
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
+..|.+.+. +.++.+|++.+..-||++.+
T Consensus 8 ~~~Grs~eqK~~L~~~it~~l~~~lg~p~~ 37 (76)
T 3ej9_A 8 MRYGRTDEQKRALSAGLLRVISEATGEPRE 37 (76)
T ss_dssp EETTCCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred EcCCCCHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 456999999 99999999999988887754
No 18
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=39.49 E-value=8.2 Score=20.79 Aligned_cols=26 Identities=8% Similarity=-0.111 Sum_probs=23.4
Q ss_pred CCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 17 DFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 17 GF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
|++.+. +.++.+|++.+..-||++.+
T Consensus 13 grs~eqK~~l~~~lt~~l~~~lg~p~~ 39 (67)
T 3m21_A 13 GPTNEQKQQLIEGVSDLMVKVLNKNKA 39 (67)
T ss_dssp BSCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 899999 99999999999988888754
No 19
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=29.98 E-value=24 Score=20.65 Aligned_cols=28 Identities=18% Similarity=0.004 Sum_probs=24.2
Q ss_pred ecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 15 ELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 15 ~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
..|.+.+. +.|+.+|.+.+..-||++.+
T Consensus 65 ~~g~t~eqk~~l~~~i~~~l~~~lgi~~~ 93 (115)
T 2xcz_A 65 IGALDGSRTQEVSELVCGHIEQNLGIPAD 93 (115)
T ss_dssp SSCCCTTHHHHHHHHHHHHHHHHHCCCGG
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 34788888 99999999999998998764
No 20
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=29.56 E-value=22 Score=20.75 Aligned_cols=27 Identities=15% Similarity=0.031 Sum_probs=23.5
Q ss_pred cCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 16 LDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 16 SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
.|.+.+. +.|+..|.+.+..-||++.+
T Consensus 66 ~g~~~eqk~~l~~~i~~~l~~~lgi~~~ 93 (112)
T 3b64_A 66 GGYGPSEPEKVTSIVTAAITKECGIVAD 93 (112)
T ss_dssp TCCCTTHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 4788888 99999999999998998764
No 21
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=28.44 E-value=23 Score=21.30 Aligned_cols=28 Identities=14% Similarity=0.132 Sum_probs=20.5
Q ss_pred ecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 15 ELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 15 ~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
..|.+.+. +.|+.+|...+..-||++.+
T Consensus 65 ~~g~t~eqk~~l~~~i~~~l~~~lgi~~~ 93 (125)
T 2wkb_A 65 IGGINRSNNSLLADKITKILSNHLSVKPR 93 (125)
T ss_dssp C-----CTHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 34788888 99999999999999998865
No 22
>2z2q_B Coat protein gamma; wild type, icosahedral virus, virus/RNA complex; 2.70A {Flock house virus} PDB: 2q26_B 3lob_D 2bbv_D
Probab=28.38 E-value=20 Score=19.16 Aligned_cols=17 Identities=24% Similarity=0.260 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHccCCCC
Q psy15112 24 IHAARIHRMIKLGLGIE 40 (73)
Q Consensus 24 ~fA~RI~~ml~~~L~i~ 40 (73)
+|-.|+-+++|.+|+.-
T Consensus 2 ~~WErVk~ilks~l~a~ 18 (44)
T 2z2q_B 2 SMWERVKSIIKSSLAAA 18 (44)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 57889999999998843
No 23
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=27.97 E-value=32 Score=21.29 Aligned_cols=30 Identities=23% Similarity=0.091 Sum_probs=25.9
Q ss_pred eecCCCCCc-hhHHHHHHHHHHccCCCCCCC
Q psy15112 14 QELDFWLEN-LIHAARIHRMIKLGLGIEDDD 43 (73)
Q Consensus 14 L~SGF~led-~~fA~RI~~ml~~~L~i~~~~ 43 (73)
|.-|++.+. +.++..|++.+...++++.+.
T Consensus 7 l~~Grs~e~k~~L~~~it~al~e~~~vP~~d 37 (136)
T 3mlc_A 7 LTSDRSREQRRAIADAVHDALVEVLAIPARD 37 (136)
T ss_dssp EETTSCSHHHHHHHHHHHHHHHHHHCCCTTC
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHHhCcChhH
Confidence 456899999 999999999999999988753
No 24
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=26.08 E-value=18 Score=19.89 Aligned_cols=29 Identities=21% Similarity=-0.060 Sum_probs=23.9
Q ss_pred eecCC-CCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 14 QELDF-WLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 14 L~SGF-~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
|..|- +.+. +.++.+|++.+..-||+..+
T Consensus 7 l~~Grls~eqk~~L~~~l~~~l~~~lgip~~ 37 (76)
T 1gyx_A 7 CFPRELDEQQKAALAADITDVIIRHLNSKDS 37 (76)
T ss_dssp ESCCCCCHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 34575 8888 99999999999988888764
No 25
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=25.60 E-value=28 Score=21.51 Aligned_cols=26 Identities=15% Similarity=0.088 Sum_probs=22.2
Q ss_pred CCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 17 DFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 17 GF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
|.+.+. +.|+.+|...+..-|||+.+
T Consensus 88 ~~~~e~n~~~s~~i~~~l~~~LgI~~~ 114 (133)
T 3fwu_A 88 GYGPSEPEKVTSIVTAAITKECGIVAD 114 (133)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCcChh
Confidence 466667 89999999999999998865
No 26
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=25.33 E-value=26 Score=21.77 Aligned_cols=27 Identities=7% Similarity=-0.058 Sum_probs=19.8
Q ss_pred cCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 16 LDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 16 SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
.|.+.+. +.|+.+|.+.+..-|||+.+
T Consensus 87 g~~t~e~n~~~s~~i~~~l~~~Lgi~~~ 114 (135)
T 3t5s_A 87 GVISQAKNPSISAAITGCLTQHFKVKPE 114 (135)
T ss_dssp C-----CCHHHHHHHHHHHHHHHCCCGG
T ss_pred EEEeccCCchHHHHHHHHHHHhcccCcc
Confidence 3577788 99999999999999999865
No 27
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=24.76 E-value=21 Score=20.83 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=23.9
Q ss_pred ecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 15 ELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 15 ~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
..|.+.+. +.|+.+|.+.+..-||++.+
T Consensus 64 ~~g~~~eqk~~l~~~i~~~l~~~lgi~~~ 92 (113)
T 1hfo_A 64 IGGIEPSRNRDHSAKLFDHLNTKLGIPKN 92 (113)
T ss_dssp SSSCSHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHhCcCcC
Confidence 34788888 99999999999999998764
No 28
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=24.14 E-value=21 Score=20.89 Aligned_cols=28 Identities=7% Similarity=-0.100 Sum_probs=23.9
Q ss_pred ecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 15 ELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 15 ~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
..|.+.+. +.|+.+|.+.+..-||++.+
T Consensus 65 ~~g~~~eqk~~l~~~i~~~l~~~lgi~~~ 93 (115)
T 1uiz_A 65 IGKIGGPQNKSYTKLLCDILTKQLNIPAN 93 (115)
T ss_dssp SSCCSHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 34788888 99999999999998998864
No 29
>1nov_D Nodamura virus coat proteins; insect virus, icosahedral VIRU; 3.50A {Nodamura virus}
Probab=22.90 E-value=26 Score=18.72 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHccCCCC
Q psy15112 24 IHAARIHRMIKLGLGIE 40 (73)
Q Consensus 24 ~fA~RI~~ml~~~L~i~ 40 (73)
+|-.|+-+++|.+|+.-
T Consensus 2 ~mWErVk~ilks~l~~a 18 (44)
T 1nov_D 2 TFWERVRSILKSGLNFA 18 (44)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 57789999999998844
No 30
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=22.79 E-value=23 Score=20.96 Aligned_cols=28 Identities=14% Similarity=0.204 Sum_probs=23.9
Q ss_pred ecCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 15 ELDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 15 ~SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
..|.+.+. +.|+.+|.+.+..-||++.+
T Consensus 65 ~~g~~~eqk~~l~~~i~~~l~~~lgi~~~ 93 (119)
T 2os5_A 65 IGALSADDNIRHTQKITQFCQDTLKLPKD 93 (119)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 34788888 99999999999998998864
No 31
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=21.56 E-value=28 Score=21.45 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=22.9
Q ss_pred cCCCCCc-hhHHHHHHHHHHccCCCCCC
Q psy15112 16 LDFWLEN-LIHAARIHRMIKLGLGIEDD 42 (73)
Q Consensus 16 SGF~led-~~fA~RI~~ml~~~L~i~~~ 42 (73)
.|.+.+. +.|+.+|.+.+..-|||+.+
T Consensus 87 g~~~~e~n~~~s~~i~~~l~~~LgI~~~ 114 (133)
T 3fwt_A 87 GEYAPSKPKMMTPRIAAAITKECGIPAE 114 (133)
T ss_dssp ECCCTHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCcChh
Confidence 3567777 99999999999999998865
No 32
>1x57_A Endothelial differentiation-related factor 1; HMBF1alpha, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.12
Probab=20.42 E-value=80 Score=17.13 Aligned_cols=20 Identities=10% Similarity=-0.157 Sum_probs=14.0
Q ss_pred ecCCCCCc--hhHHHHHHHHHH
Q psy15112 15 ELDFWLEN--LIHAARIHRMIK 34 (73)
Q Consensus 15 ~SGF~led--~~fA~RI~~ml~ 34 (73)
+|||..++ ..|+.||-.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~l~~~r~ 23 (91)
T 1x57_A 2 SSGSSGDRVTLEVGKVIQQGRQ 23 (91)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHH
Confidence 47888887 667777766544
Done!