Query psy15116
Match_columns 78
No_of_seqs 101 out of 248
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 21:00:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15116.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15116hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1sv0_A ETS DNA-binding protein 100.0 2.3E-36 7.9E-41 184.8 9.0 72 2-74 5-76 (85)
2 1sxe_A Transcriptional regulat 100.0 2.2E-36 7.5E-41 188.7 6.7 75 1-75 21-96 (97)
3 1sxd_A GA repeat binding prote 100.0 8.7E-36 3E-40 184.2 8.8 73 1-75 17-89 (91)
4 2jv3_A ETS1 proto-oncogene; ET 100.0 1.1E-35 3.8E-40 189.1 6.8 74 1-74 35-108 (110)
5 1x66_A Friend leukemia integra 100.0 8.1E-36 2.8E-40 186.4 5.9 74 1-74 18-92 (98)
6 2dkx_A SAM pointed domain-cont 100.0 3.8E-35 1.3E-39 182.8 5.4 73 1-74 18-90 (96)
7 2ytu_A Friend leukemia integra 100.0 2.6E-34 8.8E-39 186.9 5.8 73 1-73 32-105 (128)
8 2e8p_A ELF3 protein; cell-free 100.0 1.9E-33 6.6E-38 174.1 8.1 71 2-73 19-91 (92)
9 1ji7_A ETS-related protein TEL 100.0 1.3E-32 4.5E-37 169.3 9.2 72 2-74 7-78 (89)
10 2qar_B Telsam domain; polymer, 100.0 2.2E-32 7.6E-37 169.4 8.8 72 2-74 7-78 (93)
11 1sv0_C Modulator of the activi 100.0 7.1E-32 2.4E-36 163.5 7.0 70 2-72 6-77 (82)
12 2qb0_B Telsam domain - lysozym 100.0 3E-30 1E-34 180.9 8.9 72 2-74 7-78 (241)
13 1pk1_B Sex COMB on midleg CG94 98.7 9.1E-09 3.1E-13 62.5 3.9 71 3-73 10-82 (89)
14 2d8c_A Phosphatidylcholine:cer 98.5 7.1E-07 2.4E-11 54.9 6.9 67 4-74 14-84 (97)
15 1wwu_A Hypothetical protein FL 98.2 3.9E-06 1.3E-10 52.1 5.3 58 11-73 25-83 (99)
16 3bs7_A Protein aveugle; sterIl 98.1 2.6E-06 9E-11 49.5 4.2 68 6-73 2-71 (78)
17 2e8m_A Epidermal growth factor 98.0 3.9E-06 1.3E-10 52.1 3.7 61 6-73 31-92 (99)
18 1v85_A Similar to ring finger 98.0 2.2E-06 7.4E-11 51.7 1.5 68 3-73 13-87 (91)
19 3bs5_A Protein aveugle; sterIl 97.9 1.5E-05 5.2E-10 49.4 4.3 70 3-72 19-90 (106)
20 2e8o_A SAM domain and HD domai 97.8 1.1E-05 3.7E-10 49.6 2.6 68 3-74 23-96 (103)
21 3bq7_A Diacylglycerol kinase d 97.7 3.4E-05 1.2E-09 45.3 3.8 66 3-72 3-72 (81)
22 1kw4_A Polyhomeotic; SAM domai 97.7 1.7E-05 5.9E-10 47.8 2.3 66 5-73 12-81 (89)
23 1wwv_A Connector enhancer of k 97.6 7.6E-05 2.6E-09 45.2 3.8 65 4-73 8-77 (91)
24 3bs5_B Connector enhancer of k 97.5 4.8E-05 1.6E-09 44.2 2.5 67 5-73 2-72 (80)
25 2ean_A Connector enhancer of k 97.5 5.9E-05 2E-09 44.3 2.3 65 5-73 6-76 (83)
26 2gle_A Neurabin-1; SAM domain, 97.2 0.00011 3.7E-09 42.1 1.1 63 6-72 3-69 (74)
27 1uqv_A STE50 protein; SAM, ste 97.1 0.0004 1.4E-08 41.9 3.4 70 3-75 5-81 (85)
28 2eap_A Lymphocyte cytosolic pr 96.7 0.00011 3.9E-09 44.7 -1.4 47 6-57 18-66 (90)
29 2f3n_A SH3 and multiple ankyri 96.7 0.00044 1.5E-08 40.0 0.8 60 8-71 3-66 (76)
30 2dkz_A Hypothetical protein LO 96.1 0.0017 5.7E-08 39.1 1.1 50 2-55 10-62 (84)
31 2k60_A Protein (stromal intera 95.0 0.0036 1.2E-07 41.2 -0.3 68 7-78 78-149 (150)
32 2l5y_A Stromal interaction mol 94.1 0.0018 6.1E-08 42.6 -3.4 69 5-78 76-149 (150)
33 3tad_C Liprin-beta-1; protein 91.5 0.12 3.9E-06 36.6 2.7 62 7-72 15-81 (265)
34 2kso_A Ephrin type-A receptor 81.2 2 6.7E-05 24.7 3.6 62 7-72 11-77 (82)
35 3tad_C Liprin-beta-1; protein 75.9 9.4 0.00032 26.8 6.4 60 4-68 172-238 (265)
36 3h8m_A Ephrin type-A receptor 73.3 3 0.0001 24.5 2.8 64 5-72 18-86 (90)
37 3tac_B Liprin-alpha-2; transfe 66.9 4.6 0.00016 29.4 3.1 46 7-55 36-84 (334)
38 3tac_B Liprin-alpha-2; transfe 66.3 3.4 0.00012 30.1 2.3 62 3-68 242-309 (334)
39 2d89_A EHBP1 protein; all alph 64.2 4.3 0.00015 24.8 2.3 33 12-46 11-46 (119)
40 2qkq_A Ephrin type-B receptor 62.3 1.3 4.5E-05 25.3 -0.4 51 6-60 8-62 (83)
41 2ke7_A Ankyrin repeat and ster 60.5 1.5 5E-05 26.3 -0.4 61 7-71 17-84 (103)
42 3df8_A Possible HXLR family tr 58.8 13 0.00044 21.8 3.7 32 46-77 43-74 (111)
43 3u1d_A Uncharacterized protein 56.4 14 0.00048 23.7 3.7 31 47-77 47-77 (151)
44 2k4p_A Phosphatidylinositol-3, 56.4 5.2 0.00018 23.3 1.6 47 4-55 18-68 (86)
45 1wyl_A NEDD9 interacting prote 55.6 15 0.0005 22.2 3.6 36 12-47 9-45 (116)
46 2jpf_A Hypothetical protein; a 54.9 5.2 0.00018 24.6 1.4 23 46-69 67-89 (127)
47 1b4f_A EPHB2; SAM domain, EPH 53.1 6.7 0.00023 22.1 1.6 58 11-72 10-72 (82)
48 2a1j_A DNA repair endonuclease 52.2 11 0.00036 20.4 2.3 30 39-68 26-56 (63)
49 2eao_A Ephrin type-B receptor 50.0 24 0.00082 20.6 3.8 61 7-72 17-83 (99)
50 1b0x_A Protein (EPHA4 receptor 47.6 8.6 0.00029 22.4 1.5 63 6-72 20-87 (94)
51 1wyq_A Spectrin beta chain, br 46.9 18 0.0006 22.2 3.0 34 12-47 9-45 (127)
52 1bhd_A Utrophin; calponin homo 46.6 17 0.00058 22.0 2.9 32 14-47 12-46 (118)
53 2e8n_A Ephrin type-A receptor 46.4 6.6 0.00023 22.6 0.9 58 11-72 11-73 (88)
54 2d87_A Smoothelin splice isofo 46.2 12 0.00042 23.0 2.2 32 13-46 10-44 (128)
55 4g6q_A Putative uncharacterize 45.5 17 0.00057 23.3 2.8 28 49-76 40-67 (182)
56 1p2x_A RNG2 protein, RAS GTPas 43.8 7.3 0.00025 24.9 0.9 35 11-46 12-47 (159)
57 1bkr_A Spectrin beta chain; fi 43.6 16 0.00055 21.8 2.4 33 13-47 6-41 (109)
58 1z00_B DNA repair endonuclease 42.7 11 0.00037 21.8 1.4 29 40-68 41-70 (84)
59 1ujo_A Transgelin; CH domain, 38.6 11 0.00039 23.6 1.1 35 12-47 11-50 (144)
60 3sei_A Caskin-1; SAM domain, p 37.9 18 0.00062 22.7 2.0 58 11-72 9-70 (149)
61 1wj6_A KIAA0049 protein, RSGI 34.1 21 0.00072 21.7 1.8 47 6-55 32-78 (101)
62 1yg2_A Gene activator APHA; vi 33.3 28 0.00096 21.9 2.4 39 37-76 15-53 (179)
63 2hzt_A Putative HTH-type trans 32.6 63 0.0021 18.4 3.7 31 46-76 28-58 (107)
64 1ldd_A APC2WHB, anaphase promo 30.3 18 0.00061 20.7 1.0 30 1-31 34-66 (74)
65 2wa7_A Filamin-B; disease muta 30.3 28 0.00095 23.3 2.1 26 19-46 149-177 (245)
66 3f8b_A Transcriptional regulat 29.9 42 0.0014 19.7 2.7 39 37-76 25-63 (116)
67 3i6x_A P195, RAS GTPase-activa 29.2 12 0.00042 24.8 0.1 34 13-47 50-84 (193)
68 4a5n_A Uncharacterized HTH-typ 29.1 72 0.0025 19.4 3.7 31 46-76 40-70 (131)
69 2fu4_A Ferric uptake regulatio 28.6 72 0.0025 17.0 3.5 36 38-77 34-69 (83)
70 2bkf_A Zinc-finger protein NBR 28.1 18 0.00063 21.4 0.8 47 6-55 24-70 (87)
71 3kka_C Ephrin type-A receptor 27.8 37 0.0013 19.4 2.1 57 11-71 20-81 (86)
72 3pqk_A Biofilm growth-associat 27.2 46 0.0016 18.6 2.4 31 46-77 37-67 (102)
73 1y0u_A Arsenical resistance op 27.2 73 0.0025 17.5 3.3 31 46-77 44-74 (96)
74 3jth_A Transcription activator 27.0 43 0.0015 18.5 2.3 30 47-77 38-67 (98)
75 2qjz_A Microtubule-associated 26.6 15 0.00052 22.8 0.2 36 8-47 3-38 (123)
76 4b7l_A Filamin-B; structural p 25.9 44 0.0015 23.7 2.6 28 17-46 144-174 (347)
77 2rr8_A Iqgap1 protein; F-actin 25.0 8.8 0.0003 25.3 -1.2 33 13-46 28-61 (190)
78 1p5s_A RAS GTPase-activating-l 24.8 18 0.0006 24.1 0.3 34 12-46 57-91 (203)
79 1wyp_A Calponin 1; CH domain, 24.5 17 0.00059 22.5 0.2 34 12-47 19-52 (136)
80 3hoc_A Filamin-A; calponin hom 24.2 38 0.0013 23.4 1.9 26 19-46 176-204 (272)
81 2fsw_A PG_0823 protein; alpha- 23.4 78 0.0027 17.9 3.0 31 46-76 39-69 (107)
82 1wyo_A Protein EB3, microtubul 23.2 39 0.0013 21.9 1.7 34 8-47 20-55 (159)
83 2hqt_A GU4 nucleic-binding pro 23.0 50 0.0017 20.0 2.1 20 3-24 20-39 (124)
84 2fe3_A Peroxide operon regulat 22.6 1.1E+02 0.0037 18.5 3.7 23 54-76 50-72 (145)
85 1r1u_A CZRA, repressor protein 22.3 88 0.003 17.6 3.0 31 46-77 40-70 (106)
86 2d88_A Protein mical-3; all al 22.0 20 0.00068 21.8 0.1 32 14-47 13-47 (121)
87 3hil_A Ephrin type-A receptor 21.8 12 0.00041 21.4 -0.9 43 9-55 20-65 (82)
88 2l3g_A RHO guanine nucleotide 21.8 13 0.00045 22.9 -0.8 12 11-22 13-24 (126)
89 1wym_A Transgelin-2; CH domain 21.2 8.6 0.0003 24.5 -1.8 34 12-46 19-57 (155)
No 1
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=100.00 E-value=2.3e-36 Score=184.81 Aligned_cols=72 Identities=35% Similarity=0.643 Sum_probs=69.8
Q ss_pred CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116 2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY 74 (78)
Q Consensus 2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~ 74 (78)
-||+||..||++||.+||+|+++||+|++++++.|+|||++||.||+|||++++|. +||+||+||++||+++
T Consensus 5 ~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~F~m~G~~LC~ls~edF~~~~p~-~GdiL~~hL~~Lk~~~ 76 (85)
T 1sv0_A 5 SLPSDPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCPG-AGDVLHNVLQMLIIES 76 (85)
T ss_dssp TSCSSGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHSTT-THHHHHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHHHccCCCCCChhhCCCCHHHHHcCCHHHHHHHcCC-chHHHHHHHHHHHHhh
Confidence 58999999999999999999999999999999999999999999999999999995 9999999999999975
No 2
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1
Probab=100.00 E-value=2.2e-36 Score=188.73 Aligned_cols=75 Identities=37% Similarity=0.774 Sum_probs=71.8
Q ss_pred CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116 1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL 75 (78)
Q Consensus 1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~ 75 (78)
+.||+||..||++||.+||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++||++.+
T Consensus 21 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~F~~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~Lk~~~~ 96 (97)
T 1sxe_A 21 VIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPL 96 (97)
T ss_dssp SSSCSSTTSCCHHHHHHHHHHHHHHHTCSSCCGGGSTTCCHHHHTTCCHHHHTTTSCHHHHHHHHHHHHHHTTSCC
T ss_pred hcCCcchhccCHHHHHHHHHHHHHhcCCCCCCHHhcCCCCHHHHHhCCHHHHHHHcCCCchHHHHHHHHHHHhCcC
Confidence 479999999999999999999999999999999999 899999999999999999987789999999999999865
No 3
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=100.00 E-value=8.7e-36 Score=184.19 Aligned_cols=73 Identities=38% Similarity=0.915 Sum_probs=70.2
Q ss_pred CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcc
Q psy15116 1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYL 75 (78)
Q Consensus 1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~ 75 (78)
+.||+||..||++||.+||+|++++|+|+++++++|+|||++||.||+|||++++|. ||+||+||++||++++
T Consensus 17 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~~~~f~m~G~~LC~ls~edF~~~~p~--GdiL~~hL~~L~k~~~ 89 (91)
T 1sxd_A 17 LGIPYDPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWSHLELLRKYVL 89 (91)
T ss_dssp TTCCSSGGGCCHHHHHHHHHHHHHHTTCCCSCSGGGCSCHHHHHHSCHHHHHHHCTT--CHHHHHHHHHHHHTTT
T ss_pred hCCCCChhhCCHHHHHHHHHHHHHccCCCCCChhhCCCCHHHHHcCCHHHHHHHCCC--chHHHHHHHHHHHhhc
Confidence 468999999999999999999999999999999999999999999999999999993 9999999999999876
No 4
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=100.00 E-value=1.1e-35 Score=189.08 Aligned_cols=74 Identities=57% Similarity=1.124 Sum_probs=71.1
Q ss_pred CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116 1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY 74 (78)
Q Consensus 1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~ 74 (78)
+.||+||+.||++||.+||+|+++||+|+++++++|+|||++||.||+|||++++|+++||+||+||++||+++
T Consensus 35 l~ip~DP~~WS~~~V~~WL~W~~~ef~L~~v~~~~F~m~G~~LC~ls~edF~~~~p~~~GdiL~~hL~~Lk~~~ 108 (110)
T 2jv3_A 35 LGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWEHLEILQKED 108 (110)
T ss_dssp TTCCSSSTTCCHHHHHHHHHHHHHHHTCCCCCTTTTCCCHHHHHHTHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred hCCCCChHhCCHHHHHHHHHHHHHhcCCCCCChhcCCCCHHHHHhCCHHHHHHHcCCCcHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999999999999999999999999999768999999999999975
No 5
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=186.39 Aligned_cols=74 Identities=36% Similarity=0.743 Sum_probs=70.8
Q ss_pred CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116 1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY 74 (78)
Q Consensus 1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~ 74 (78)
+.||+||..||++||++||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++||++.
T Consensus 18 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~~~~F~~m~G~~LC~ls~edF~~~~~~~~GdiL~~hL~~Lk~~~ 92 (98)
T 1x66_A 18 VIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRESS 92 (98)
T ss_dssp CCCCSSGGGCCTTHHHHHHHHHHHHTTCCSCCGGGGTTCCHHHHHHCCHHHHHTTSCHHHHHHHHHHHHHHHTCS
T ss_pred cCCCCChhhcCHHHHHHHHHHHHHhcCCCCCChhhCCCCCHHHHHcCCHHHHHHHcCCCchHHHHHHHHHHHhcC
Confidence 479999999999999999999999999999999999 89999999999999999998778999999999999864
No 6
>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=3.8e-35 Score=182.80 Aligned_cols=73 Identities=34% Similarity=0.704 Sum_probs=69.6
Q ss_pred CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116 1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY 74 (78)
Q Consensus 1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~ 74 (78)
+.||+||+.||++||.+||+|+++||+|+++++.+|+|||++||.||+|||++++| .+||+||+||++||++.
T Consensus 18 l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~f~m~G~~LC~lskedF~~~~p-~~GdiL~~hL~~Lk~~~ 90 (96)
T 2dkx_A 18 LNITADPMDWSPSNVQKWLLWTEHQYRLPPMGKAFQELAGKELCAMSEEQFRQRSP-LGGDVLHAHLDIWKSAA 90 (96)
T ss_dssp TTCCSCGGGCCSSTHHHHHHHHHHHTTCCCCHHHHSSCCHHHHHHSCHHHHHHHCS-SSTHHHHHHHHHHHHHH
T ss_pred cCCCCChhhCCHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHhCCHHHHHHHcC-cchHHHHHHHHHHHhcc
Confidence 36999999999999999999999999999999999999999999999999999999 49999999999999864
No 7
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=186.88 Aligned_cols=73 Identities=37% Similarity=0.762 Sum_probs=70.5
Q ss_pred CCcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116 1 MYTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE 73 (78)
Q Consensus 1 ~~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~ 73 (78)
+.||+||..||++||++||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++||++
T Consensus 32 l~IP~DP~~WS~~~V~~WL~Wa~~ef~L~~id~~~Fq~mnGk~LC~LskeDF~~~~p~~~GDiL~~hL~~Lr~~ 105 (128)
T 2ytu_A 32 VIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRES 105 (128)
T ss_dssp CSCCSCGGGCCTTHHHHHHHHHHHHTCCCSCCCGGGSSCCTTHHHHCCHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhCCHHHHHHHHHHHHHhcCCCCCChHhCCCCCHHHHHcCCHHHHHHHcCCCchHHHHHHHHHHHhc
Confidence 479999999999999999999999999999999999 8999999999999999999877899999999999998
No 8
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=174.07 Aligned_cols=71 Identities=21% Similarity=0.534 Sum_probs=66.5
Q ss_pred CcCCCccccCHHHHHHHHHHHHHh--cCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116 2 YTLDDPRQWSESNVAQWLCWAIRE--FSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE 73 (78)
Q Consensus 2 ~vP~DP~~Ws~~~V~~Wl~W~~~e--f~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~ 73 (78)
+.|.||+.||++||.+||+|++++ |+|.++++++|+|||++||+||+|||++++|+ +|||||+||++||++
T Consensus 19 w~~~dP~~Ws~~~V~~WL~Wavke~~~dl~~i~~~~f~m~G~~LC~mskedF~~~~p~-~GdiL~~hL~~L~~~ 91 (92)
T 2e8p_A 19 WLGEQPQFWSKTQVLDWISYQVEKNKYDASAIDFSRCDMDGATLCNCALEELRLVFGP-LGDQLHAQLRDLTSS 91 (92)
T ss_dssp TSSSCGGGCCHHHHHHHHHHHHHHTTCCCSSCCTTTCCCCSHHHHHSCHHHHHHHSGG-GHHHHHHHHHHHHHC
T ss_pred ccCCChhhcCHHHHHHHHHHHHHHhCCCCCCCChhhcCCCHHHHHcCCHHHHHHHcCC-cHHHHHHHHHHHHhc
Confidence 578999999999999999999986 55578999999999999999999999999997 999999999999985
No 9
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=99.98 E-value=1.3e-32 Score=169.29 Aligned_cols=72 Identities=40% Similarity=0.632 Sum_probs=68.6
Q ss_pred CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116 2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY 74 (78)
Q Consensus 2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~ 74 (78)
.+|.||..||++||.+||+|+.+||+|+++++++|+|||++||.||+|||+.++|. +||+||+||++||++.
T Consensus 7 ~l~~DP~~WS~~~V~~WL~w~~~ef~L~~~~~~~f~mdGk~Lc~Ls~edF~~~~p~-~GdiL~~hL~~l~~~~ 78 (89)
T 1ji7_A 7 HLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPH-SGDELYELLQHILKQR 78 (89)
T ss_dssp GGCSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCTT-THHHHHHHHHHHHHC-
T ss_pred CCCCChhhCCHHHHHHHHHHHHHhcCCCCCchhcCCCCHHHHHcCCHHHHHhHcCC-chHHHHHHHHHHHhCc
Confidence 48999999999999999999999999999999999999999999999999999996 7999999999999864
No 10
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=99.98 E-value=2.2e-32 Score=169.39 Aligned_cols=72 Identities=40% Similarity=0.658 Sum_probs=68.8
Q ss_pred CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116 2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY 74 (78)
Q Consensus 2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~ 74 (78)
.+|.||..||++||.+||+|+.++|+|+++++++|+|||++||.||+|||+.++|. +||+||+||++||+++
T Consensus 7 ~l~~DP~~WS~~~V~~WL~w~~~ef~L~~i~~~~f~mdGk~Lc~Lt~edF~~~~p~-~GdiL~~hL~~Lk~~~ 78 (93)
T 2qar_B 7 HLRLQPIYWSRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPH-SGDVLYELLQHILKQR 78 (93)
T ss_dssp GGCSCGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHCTT-THHHHHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHHHhcCCCCcchhcCCCCHHHHHcCCHHHHhhhCCc-chHHHHHHHHHHHHhc
Confidence 47889999999999999999999999999999999999999999999999999996 8999999999999865
No 11
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=99.97 E-value=7.1e-32 Score=163.53 Aligned_cols=70 Identities=27% Similarity=0.514 Sum_probs=64.7
Q ss_pred CcCCCccccCHHHHHHHHHHHHHhcCC--CCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHH
Q psy15116 2 YTLDDPRQWSESNVAQWLCWAIREFSL--EGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQK 72 (78)
Q Consensus 2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L--~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~ 72 (78)
.+|+||..||++||.+||+|+.++|++ +++++++|+|||++||.||+|||++++| .+||+||+||+.+-+
T Consensus 6 ~i~~dP~~Ws~~~V~~WL~w~~~e~~l~l~~~~~~~f~m~G~~Lc~ls~edF~~~~p-~~GdiL~~hL~~~l~ 77 (82)
T 1sv0_C 6 GLPLDPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRVP-VGGKMLYRDFRVRLA 77 (82)
T ss_dssp SSBSSGGGCCHHHHHHHHHHHHHHHTCCCCTHHHHTCCSCHHHHHHCCHHHHHHHCT-TTHHHHHHHHHHHHH
T ss_pred cCCCChhhCCHHHHHHHHHHHHHHhCCCCCCCccccCCCCHHHHHhCCHHHHHhhCC-CchHHHHHHHHHHHH
Confidence 589999999999999999999999876 7788899999999999999999999999 699999999995443
No 12
>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli}
Probab=99.96 E-value=3e-30 Score=180.91 Aligned_cols=72 Identities=40% Similarity=0.661 Sum_probs=68.4
Q ss_pred CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhc
Q psy15116 2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEY 74 (78)
Q Consensus 2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~ 74 (78)
-||.||++||++||.+||+|+++||+|+++++++|+|||++||+||+|||++++| ++||+||+||+.|++.+
T Consensus 7 ~~p~dP~~Wt~~~V~~Wl~w~~~~f~l~~~~~~~f~~~G~~Lc~m~~~~F~~~~p-~~G~iL~~hl~~l~k~~ 78 (241)
T 2qb0_B 7 HLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSP-HSGDVLYELLQHILKQA 78 (241)
T ss_dssp GGGSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCT-TTHHHHHHHHHHHHHTC
T ss_pred CCCCChhhCCHHHHHHHHHHHHHhcCCCCCCHHhcCCChHHHHHcCHHHHHhhcC-CcchhhHHHHHHHHHhh
Confidence 4899999999999999999999999999999999999999999999999999999 59999999999777654
No 13
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=98.73 E-value=9.1e-09 Score=62.54 Aligned_cols=71 Identities=13% Similarity=0.250 Sum_probs=50.7
Q ss_pred cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHh
Q psy15116 3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKE 73 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~ 73 (78)
+..+|..||.+||.+||+.....|+-..-.+....|||++|..||++|++..-.-..|. .+|..++.||..
T Consensus 10 ~~~~v~~WsvedV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt~~dl~~~mgiklGpalKi~~~I~~lk~~ 82 (89)
T 1pk1_B 10 LRSQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSERMMKYMGLKLGPALKICNLVNKVNGR 82 (89)
T ss_dssp -CCCGGGCCHHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCCHHHHHHHSCCCHHHHHHHHHHHHHHC--
T ss_pred CCCCchhCCHHHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCCHHHHHHccCCCccHHHHHHHHHHHHHcc
Confidence 56899999999999999877433333222344567999999999999997755433564 567888877754
No 14
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=98.45 E-value=7.1e-07 Score=54.89 Aligned_cols=67 Identities=22% Similarity=0.314 Sum_probs=48.2
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhh--hCCCCCh--HHHHHHHHHHHHhc
Q psy15116 4 LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLA--RAPPFMG--DILWEHLEILQKEY 74 (78)
Q Consensus 4 P~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~--~~p~~~G--diL~~hL~~lk~~~ 74 (78)
+.++..||.+||.+||+=. .|+-..-.+. +|+|+.|..||.+|+.. .--...| ..|+..++.||+..
T Consensus 14 ~~~v~~Ws~edV~~WL~~~--Gl~~Y~~~F~--~IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~~I~~L~~~~ 84 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLEN--AMPEYCEPLE--HFTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEH 84 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHT--TCTTTTTTTT--TCCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHHHHHHS
T ss_pred CCchhhCCHHHHHHHHHHc--CCHHHHHHHH--cCCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5688999999999999722 2222112232 49999999999999987 3322234 77999999999865
No 15
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=98.15 E-value=3.9e-06 Score=52.09 Aligned_cols=58 Identities=21% Similarity=0.315 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116 11 SESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE 73 (78)
Q Consensus 11 s~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~ 73 (78)
|.++|.+||. .+.|+=..+ ..| ..+|.+|..||++|+...|| .-|--||..|..-|+.
T Consensus 25 sp~EV~~WL~--~kgFS~~tv--~~Lg~ltGaqLf~Ltk~eL~~vCg-~EG~RlysqL~~qk~~ 83 (99)
T 1wwu_A 25 GPDEVRAWLE--AKAFSPRIV--ENLGILTGPQLFSLNKEELKKVCG-EEGVRVYSQLTMQKAF 83 (99)
T ss_dssp CHHHHHHHHH--HHTCCTTHH--HHTTSSCHHHHHTCCHHHHHHHHT-TTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH--HcCCCHHHH--HHHcCCCHHHHHcCCHHHHHHHCc-chhHHHHHHHHHHHHH
Confidence 8899999997 666665322 455 68999999999999999999 4899999999887764
No 16
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=98.14 E-value=2.6e-06 Score=49.52 Aligned_cols=68 Identities=15% Similarity=0.260 Sum_probs=48.0
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHh
Q psy15116 6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKE 73 (78)
Q Consensus 6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~ 73 (78)
....||.++|.+||.-....++-..-.+..-.++|+.|+.||.+++...--...|+ .++..++.||..
T Consensus 2 ~v~~Wt~~~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L~~~dL~~lGI~~~g~r~~il~~I~~Lr~~ 71 (78)
T 3bs7_A 2 AVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQRLK 71 (78)
T ss_dssp CGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhCCHHHHhHcCCCCHHHHHHHHHHHHHHHhH
Confidence 45689999999999865111221112233446999999999999998876544675 477888888764
No 17
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.04 E-value=3.9e-06 Score=52.08 Aligned_cols=61 Identities=15% Similarity=0.386 Sum_probs=48.1
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCCCCCCCC-CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHh
Q psy15116 6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKE 73 (78)
Q Consensus 6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f-~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~ 73 (78)
+|.. |.++|.+||. .+.|+-.. ...| ..+|.+|..||++|+...|| -|--||..|..-|..
T Consensus 31 ~~~S-sp~EV~~WL~--~kgFS~~t--v~~Lg~ltGaqLl~Ltk~eL~~vCg--EG~RlysqL~vqk~~ 92 (99)
T 2e8m_A 31 TYDS-TPEDVKTWLQ--SKGFNPVT--VNSLGVLNGAQLFSLNKDELRTVCP--EGARVYSQITVQKAA 92 (99)
T ss_dssp CTTC-CTTHHHHHHH--HHTCCHHH--HHHTSSSCHHHHHHCCHHHHHHHCT--THHHHHHHHHHHHHH
T ss_pred CCCC-CHHHHHHHHH--HcCCCHHH--HHHHcCCCHHHHHcCCHHHHHHHCC--chHHHHHHHHHHHHH
Confidence 3444 7899999997 55565422 2445 68999999999999999999 599999999887764
No 18
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=97.97 E-value=2.2e-06 Score=51.67 Aligned_cols=68 Identities=13% Similarity=0.185 Sum_probs=47.0
Q ss_pred cCCCccccCHHHHHHHHHHHH---HhcCCCCCCCCCCCCCHHHHhcCCHHHHhh--hCCCCChHH--HHHHHHHHHHh
Q psy15116 3 TLDDPRQWSESNVAQWLCWAI---REFSLEGVTLHQFYMRGKDICSMGKESFLA--RAPPFMGDI--LWEHLEILQKE 73 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~~---~ef~L~~~~~~~f~m~G~~LC~lt~edF~~--~~p~~~Gdi--L~~hL~~lk~~ 73 (78)
.+.++..||.++|.+||.-.- .+|. -.+..-.++|+.|+.||.+|+.+ .--...|+. ++..++.||..
T Consensus 13 ~~~~v~~Wt~~dV~~WL~~~gl~~~~Y~---~~F~~~~IdG~~Ll~Lt~~dL~~~~LGI~~~g~r~~il~~I~~Lr~~ 87 (91)
T 1v85_A 13 VHKAVDKWTTEEVVLWLEQLGPWASLYR---DRFLSERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILTELERVRSG 87 (91)
T ss_dssp HHSCGGGCCHHHHHHHHHHHCGGGHHHH---HHHHHTTCCHHHHHHCCHHHHHSTTTCCCCHHHHHHHHHHHHHHHSC
T ss_pred CCCCcccCCHHHHHHHHHHcCCCHHHHH---HHHHHhCCCHHHHhcCCHHHHhccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 457899999999999997431 1121 11222279999999999999986 433235644 77777877753
No 19
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=97.88 E-value=1.5e-05 Score=49.38 Aligned_cols=70 Identities=14% Similarity=0.237 Sum_probs=48.8
Q ss_pred cCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116 3 TLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 72 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~ 72 (78)
.|.++..||.++|.+||.-....+.-..-.+..-.++|+.|..|+.+++.+.--...|+ .++..++.||.
T Consensus 19 ~~~~v~~Wt~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dLk~LGI~~~GhR~kIl~~I~~Lr~ 90 (106)
T 3bs5_A 19 RPKAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQRL 90 (106)
T ss_dssp -CCCGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhCCHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 47788999999999999855211211111233336999999999999998765434565 46888888875
No 20
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=1.1e-05 Score=49.58 Aligned_cols=68 Identities=15% Similarity=0.244 Sum_probs=49.3
Q ss_pred cCCCccccCHHHHHHHHHHHHHhcCCCC--C--CCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHhc
Q psy15116 3 TLDDPRQWSESNVAQWLCWAIREFSLEG--V--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKEY 74 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~--~--~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~~ 74 (78)
.+.++..||.++|.+||.-. ++.. . .+..-.++|..|+.|+.+++.+.--...|+ .++..++.||+..
T Consensus 23 ~~~~v~~Ws~~~V~~WL~~l----gl~~~~y~~~F~~~~I~G~~Ll~Lt~~dLkeLGI~~~G~R~kil~~I~~Lr~~~ 96 (103)
T 2e8o_A 23 LHPDYKTWGPEQVCSFLRRG----GFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQRLVQIH 96 (103)
T ss_dssp CCSCGGGCHHHHHHHHHHHH----TCCCHHHHHHHHHTTCCTTTTTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHTTT
T ss_pred cccChhhCCHHHHHHHHHHc----CCChHHHHHHHHHcCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHHHhH
Confidence 46789999999999999743 3432 1 122336999999999999998755433575 4778888888643
No 21
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=97.72 E-value=3.4e-05 Score=45.30 Aligned_cols=66 Identities=17% Similarity=0.285 Sum_probs=45.3
Q ss_pred cCCCccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116 3 TLDDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 72 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~ 72 (78)
-|.++..||.++|.+||.-. +|+.. .+..-.++|..|+.||.+|+...--...|+ .+...++.|+.
T Consensus 3 ~~~~v~~Ws~~~V~~WL~~l----gl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~ghr~kIl~aI~~L~~ 72 (81)
T 3bq7_A 3 KTRPVHLWGTEEVAAWLEHL----SLCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGIKELSR 72 (81)
T ss_dssp --CCGGGCCHHHHHHHHHHT----TCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHC
T ss_pred CCCChhhCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHCcCCHHHHhHcCCCCHHHHHHHHHHHHHHHH
Confidence 47889999999999999733 34332 233447999999999999998754323464 45566666654
No 22
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=97.70 E-value=1.7e-05 Score=47.76 Aligned_cols=66 Identities=11% Similarity=0.160 Sum_probs=43.4
Q ss_pred CCccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHh
Q psy15116 5 DDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKE 73 (78)
Q Consensus 5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~ 73 (78)
.++..||.++|.+||.-. -+++.. .+..-.++|+.|..||.+|+........| -.++..++.||..
T Consensus 12 ~~v~~Ws~edV~~wL~~l---~gl~~y~~~F~~~~IdG~~LL~Lt~~dL~k~lgIklG~r~kI~~~I~~L~~~ 81 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIREL---PGCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVAKVESIKEV 81 (89)
T ss_dssp CCGGGCCHHHHHHHHHTS---TTCGGGHHHHHHTTCCHHHHHHCCHHHHHTTTCCCHHHHHHHHHHHHHHC--
T ss_pred CCchhCCHHHHHHHHHHC---cChHHHHHHHHHhCccHHHHhcCCHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 478999999999999622 023221 12233699999999999999543332356 4577777777653
No 23
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=97.56 E-value=7.6e-05 Score=45.19 Aligned_cols=65 Identities=22% Similarity=0.470 Sum_probs=47.6
Q ss_pred CCCccccCHHHHHHHHHHH---HHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHh
Q psy15116 4 LDDPRQWSESNVAQWLCWA---IREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKE 73 (78)
Q Consensus 4 P~DP~~Ws~~~V~~Wl~W~---~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~ 73 (78)
......||+++|.+||+-. ..+| .+..-.++|++|..||.+|+.+.--...| ..+.+-++.||+.
T Consensus 8 ~~~v~~Wt~~~V~~WL~~l~~~l~~Y-----~F~~~~I~G~~LL~Lt~~dL~~LGI~~~Ghr~~Il~~I~~L~~~ 77 (91)
T 1wwv_A 8 MEPVETWTPGKVATWLRGLDDSLQDY-----PFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQAL 77 (91)
T ss_dssp CCCTTTCCTTTHHHHHHHHCHHHHTS-----CHHHHCCCHHHHTTCCTTTGGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHhcCCccccc-----cHHhcCccHHHHhhCCHHHHHHcCCCcHhHHHHHHHHHHHHHHH
Confidence 3567899999999999844 4556 23334689999999999998875433355 4577777777764
No 24
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=97.53 E-value=4.8e-05 Score=44.25 Aligned_cols=67 Identities=15% Similarity=0.292 Sum_probs=44.7
Q ss_pred CCccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHHh
Q psy15116 5 DDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKE 73 (78)
Q Consensus 5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~~ 73 (78)
.....||.++|.+||.-.. -+++.. .+..-.++|..|..||.+|+.+.--...|+ .+...++.||+.
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~--~gl~~Y~~~F~~~~i~G~~Ll~L~~~dL~~lGI~~~ghr~~il~~I~~L~~~ 72 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLD--DCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCAL 72 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSC--GGGGGGHHHHHHHTCCHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHh--hhHHHHHHHHHHcCCCHHHHHHCCHHHHHHcCCCCHHHHHHHHHHHHHHHHh
Confidence 3578999999999998210 012111 122226899999999999997754333564 567777777764
No 25
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.46 E-value=5.9e-05 Score=44.27 Aligned_cols=65 Identities=15% Similarity=0.380 Sum_probs=45.4
Q ss_pred CCccccCHHHHHHHHHHHHHhc--CCCCC--CCCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHh
Q psy15116 5 DDPRQWSESNVAQWLCWAIREF--SLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKE 73 (78)
Q Consensus 5 ~DP~~Ws~~~V~~Wl~W~~~ef--~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~ 73 (78)
..+..||.++|.+||. .. .++.. .+..-.++|..|..||.+|+.+.--...| ..+...++.||+.
T Consensus 6 ~~v~~Wt~~~V~~WL~----~l~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL~~LGI~~~ghr~~il~~I~~L~~~ 76 (83)
T 2ean_A 6 SGVSKWSPSQVVDWMK----GLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCAL 76 (83)
T ss_dssp CSGGGCCTTHHHHHHT----TSCGGGTTTHHHHHHHTCCHHHHTTCCHHHHHHHTCCCSHHHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHH----HHHhhHHHHHHHHHHCCCCHHHHhhCCHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 5678999999999997 12 12221 12222689999999999999887533356 4567777777753
No 26
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=97.16 E-value=0.00011 Score=42.14 Aligned_cols=63 Identities=17% Similarity=0.305 Sum_probs=42.7
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116 6 DPRQWSESNVAQWLCWAIREFSLEG--VTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 72 (78)
Q Consensus 6 DP~~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~ 72 (78)
....||.++|.+||.-. +++. ..+..-.++|..|+.||.+|+...--...|+ .+...++.||.
T Consensus 3 ~v~~Ws~~~V~~WL~~~----gl~~y~~~F~~~~i~g~~Ll~l~~~dL~~lGI~~~g~r~kil~~i~~L~~ 69 (74)
T 2gle_A 3 MVHEWSVQQVSHWLVGL----SLDQYVSEFSAQNISGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKM 69 (74)
T ss_dssp CGGGCCSGGGHHHHHHT----TTHHHHHHHTTTTCCHHHHHTCCHHHHHTTTCCCHHHHHHHHHHHHSHHH
T ss_pred CcccCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHhhCCHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 46789999999999743 2322 1233447899999999999976554323564 35566666664
No 27
>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A
Probab=97.13 E-value=0.0004 Score=41.90 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=53.2
Q ss_pred cCCCccccCHHHHHHHHHHHHHhcCCCCCC--CCCC---CCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHHhcc
Q psy15116 3 TLDDPRQWSESNVAQWLCWAIREFSLEGVT--LHQF---YMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKEYL 75 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f---~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~~~~ 75 (78)
.+.+-+.||.+||.+|+.. +-.+++.| .++| .|+|.-|-.|+.||..+++....| --|-.-++.||.+.+
T Consensus 5 ~~~~v~~Wt~~~V~~W~~~---~lg~~d~d~~~~~f~~ndItG~vL~eL~leDlKEL~i~s~~~r~~lk~~In~Lr~~~l 81 (85)
T 1uqv_A 5 NNEDFSQWSVDDVITWCIS---TLEVEETDPLCQRLRENDIVGDLLPELCLQDCQDLCDGDLNKAIKFKILINKMRDSKL 81 (85)
T ss_dssp SCCCTTTCCHHHHHHHHHH---HHSSCTTSTHHHHHHHSCCCGGGHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHCCS
T ss_pred cccccccCCHHHHHHHHHH---HhCCCCccHHHHHHHHcCCchhhHHHcCHHHHHHhCchHHHHHHHHHHHHHHHHHhhc
Confidence 4677889999999998853 44455533 4566 699999999999999999987655 566777777776543
No 28
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.74 E-value=0.00011 Score=44.70 Aligned_cols=47 Identities=9% Similarity=0.330 Sum_probs=34.0
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCCCCC--CCCCCCHHHHhcCCHHHHhhhCCC
Q psy15116 6 DPRQWSESNVAQWLCWAIREFSLEGVTL--HQFYMRGKDICSMGKESFLARAPP 57 (78)
Q Consensus 6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~--~~f~m~G~~LC~lt~edF~~~~p~ 57 (78)
+...||+++|..||+ +-++.+.+. ....|||++|..||.+||+. .|.
T Consensus 18 eV~~Wsp~~VadWLk----k~g~~~cd~lv~Kh~IDG~~lL~LtE~Dlrk-~Pk 66 (90)
T 2eap_A 18 EVLGWDPDSLADYFK----KLNYKDCEKAVKKYHIDGARFLNLTENDIQK-FPK 66 (90)
T ss_dssp HHTTCCTTTHHHHHH----HTTCHHHHHHHHHTTCCHHHHHTCCHHHHTT-SCT
T ss_pred cccccCHHHHHHHHH----HcCCchHHHHHHHhccCchhhhcccHHHhcc-CCc
Confidence 457899999999995 222322222 25569999999999999984 454
No 29
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=96.66 E-value=0.00044 Score=40.00 Aligned_cols=60 Identities=22% Similarity=0.369 Sum_probs=39.5
Q ss_pred cccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHH
Q psy15116 8 RQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQ 71 (78)
Q Consensus 8 ~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk 71 (78)
..||.++|.+||.-. +++..- +..-.++|..|+.||.+|+...--...|+ .+...++.|+
T Consensus 3 ~~Ws~~~V~~WL~~l----gl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~Ghr~kIl~aI~~l~ 66 (76)
T 2f3n_A 3 QLWSKFDVGDWLESI----HLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALRQLD 66 (76)
T ss_dssp GGCCHHHHHHHHHHT----TCGGGHHHHHHTTCCGGGGGGCCHHHHHHTTCCCHHHHHHHHHHHHTC-
T ss_pred hhCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHccCCHHHHHHcCCCChhHHHHHHHHHHHHH
Confidence 579999999999732 443321 23447999999999999997654333564 3444444444
No 30
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.11 E-value=0.0017 Score=39.07 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=37.6
Q ss_pred CcCCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC---CCCHHHHhcCCHHHHhhhC
Q psy15116 2 YTLDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSMGKESFLARA 55 (78)
Q Consensus 2 ~vP~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f---~m~G~~LC~lt~edF~~~~ 55 (78)
..|+|-..||.++|..||+. ..|+.--.+.| .++|.-|+.|++|...+-.
T Consensus 10 ~pP~dLs~lSv~EVs~~Lr~----igL~e~vv~~F~~e~IDG~lL~~L~ee~L~edf 62 (84)
T 2dkz_A 10 QPPADLSGLSIEEVSKSLRF----IGLSEDVISFFVTEKIDGNLLVQLTEEILSEDF 62 (84)
T ss_dssp CCCSCCSSCCHHHHHHHGGG----TCCCHHHHHHHHTTTCCHHHHHHCCHHHHHHTS
T ss_pred CCchhhhhcCHHHHHHHHHH----cCCcHHHHHHHHHHccchHHHHhCCHHHHHhhc
Confidence 36999999999999999974 34432112344 5899999999999886544
No 31
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=95.01 E-value=0.0036 Score=41.15 Aligned_cols=68 Identities=18% Similarity=0.279 Sum_probs=44.0
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHH--HhhhCCCCChHHHHHHHHHHHHhccccC
Q psy15116 7 PRQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKES--FLARAPPFMGDILWEHLEILQKEYLVIF 78 (78)
Q Consensus 7 P~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~ed--F~~~~p~~~GdiL~~hL~~lk~~~~~~~ 78 (78)
-..||.++|.+||.... +|+..- +..-.++|++|-.|+.++ ++...-. -.+..+.+=-.||...+|+|
T Consensus 78 V~nWTvedV~~WL~~~v---~LpqY~~~Fr~~~I~G~~LprLa~~~~~~L~~~Lg-I~~~~hRqKl~lkald~vlF 149 (150)
T 2k60_A 78 VYNWTVDEVVQWLITYV---ELPQYEETFRKLQLSGHAMPRLAVTNTTMTGTVLK-MTDRSHRQKLQLKALDTVLF 149 (150)
T ss_dssp HHHCCHHHHHHHHHHHH---CCTTHHHHHHHHCCSTTHHHHHSSCHHHHCSSCSC-SCHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHcC---CcHHHHHHHHHcCCCHHHHHhhccccHHHHHHhcC-CCCHHHHHHHHHHHHhHHhc
Confidence 45799999999997644 355432 334479999999999986 6533221 23444444444566666665
No 32
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=94.09 E-value=0.0018 Score=42.59 Aligned_cols=69 Identities=16% Similarity=0.329 Sum_probs=41.8
Q ss_pred CCccccCHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHH--Hhh-hCCCCChHHHHHHHHHHHHhccccC
Q psy15116 5 DDPRQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKES--FLA-RAPPFMGDILWEHLEILQKEYLVIF 78 (78)
Q Consensus 5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~ed--F~~-~~p~~~GdiL~~hL~~lk~~~~~~~ 78 (78)
+.-..||.++|.+||...+ +|+..- +..-.++|++|-.|+..+ ++. .-.. ........|. ||.-.+|+|
T Consensus 76 s~V~nWTvedV~~WL~~~v---~LpqY~~~Fr~~~IdG~~LprL~~~~~~~L~~~LGI-~~~~hR~Kl~-lkald~vlF 149 (150)
T 2l5y_A 76 SEVHNWTLEDTLQWLIEFV---ELPQYEKNFRDNNVKGTTLPRIAVHEPSFMISQLKI-SDRSHRQKLQ-LKALDVVLF 149 (150)
T ss_dssp SHHHHCCHHHHHHHHHHHT---CCTTSHHHHHHHHCSSSTTTTCCSSSCCSTTTTSSC-CCHHHHHHHH-HHHHHHHHH
T ss_pred CcchhCCHHHHHHHHHHcC---CcHHHHHHHHHcCCCHHHhhhhhhcchHHHHHHhCC-CCHHHHHHHH-HHHHHHHhc
Confidence 3346899999999997643 455532 234479999999999864 432 2221 2222233333 666666654
No 33
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=91.49 E-value=0.12 Score=36.62 Aligned_cols=62 Identities=16% Similarity=0.285 Sum_probs=40.7
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHhcCCHHHHhhhCC-CCCh--HHHHHHHHHHHH
Q psy15116 7 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAP-PFMG--DILWEHLEILQK 72 (78)
Q Consensus 7 P~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC~lt~edF~~~~p-~~~G--diL~~hL~~lk~ 72 (78)
-..|+.++|.+||. +..++.. .+....++|+.|..||.+|..+-.. ...| ..|-..++.+++
T Consensus 15 ~~~W~~e~V~~WLe----~~GL~~Y~~~f~~n~~dG~~Ll~lt~~dLe~eLGI~nplHRkKL~laI~el~~ 81 (265)
T 3tad_C 15 FAKWTKEQVCSWLA----EQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGS 81 (265)
T ss_dssp GGGSCHHHHHHHHH----HTTCCTTHHHHTTTCSCSHHHHHSCHHHHHHHTCCCSHHHHHHHHHHHHHHHH
T ss_pred hhhCChHHHHHHHH----HHCHHHHHHHHHHhCCchHHHHhCCHHHHHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 36899999999997 2445432 2445679999999999999974443 2223 233444455443
No 34
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=81.18 E-value=2 Score=24.74 Aligned_cols=62 Identities=13% Similarity=0.090 Sum_probs=35.3
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-HHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHH
Q psy15116 7 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQK 72 (78)
Q Consensus 7 P~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~-G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~ 72 (78)
|..|+...|.+||.- .+|... .+..-.++ +..|+.||.+|....--...| ..+...++.||.
T Consensus 11 ~~~~~~~~V~~WL~~----lgL~qY~~~F~~~gid~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~Lr~ 77 (82)
T 2kso_A 11 VPRGSHMTVSEWLES----IKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLKD 77 (82)
T ss_dssp -------CHHHHHHH----TTCTTHHHHHHHTTCCSHHHHTTCCHHHHHHHHCCCTTHHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHH----CCCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 566888999999973 234332 22333567 899999999999876422245 344566666664
No 35
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=75.92 E-value=9.4 Score=26.75 Aligned_cols=60 Identities=23% Similarity=0.402 Sum_probs=38.8
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCCCC--CCCCCCCCCHHHHh---cCCHHHHhhhC--CCCChHHHHHHHH
Q psy15116 4 LDDPRQWSESNVAQWLCWAIREFSLEG--VTLHQFYMRGKDIC---SMGKESFLARA--PPFMGDILWEHLE 68 (78)
Q Consensus 4 P~DP~~Ws~~~V~~Wl~W~~~ef~L~~--~~~~~f~m~G~~LC---~lt~edF~~~~--p~~~GdiL~~hL~ 68 (78)
|.|+..||.+.|.+|++= -+|.+ .|+..-.+.|.-|. .++.|.+-... |+ .-.++=.||+
T Consensus 172 ~~~v~~Wtn~rv~~Wl~~----i~L~eya~NL~~sGvhGal~~le~~F~~~~lA~~L~iP~-~k~~~rrhl~ 238 (265)
T 3tad_C 172 PSEVQQWTNHRVMEWLRS----VDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPP-NKTLLRRHLA 238 (265)
T ss_dssp GGGGGGCCHHHHHHHHHH----TTCTTTGGGGTTSCCCHHHHHHCTTCCHHHHHHHTTCCT-TCHHHHHHHH
T ss_pred cccccccchHHHHHHHHh----CCHHHHHhHhhhcCccchhhhccCCCCHHHHHHHhCCCC-CchHHHHHHH
Confidence 567789999999999973 23333 23334467788887 67777765444 53 4555555554
No 36
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=73.28 E-value=3 Score=24.48 Aligned_cols=64 Identities=13% Similarity=0.243 Sum_probs=40.5
Q ss_pred CCccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-HHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHH
Q psy15116 5 DDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQK 72 (78)
Q Consensus 5 ~DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~-G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~ 72 (78)
.-|..++.+.|.+||. ..+|... .+..-.++ +..|..||.+|+...--...| ..+...++.||.
T Consensus 18 ~~~~~~~~~~V~~WL~----~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL~~lGIt~~GHRkkIL~ai~~Lr~ 86 (90)
T 3h8m_A 18 GTPDFTTFCSVGEWLQ----AIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQTMRA 86 (90)
T ss_dssp -CCCCCCCSSHHHHHH----HTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcchhHHHHHHH----HCChHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 3466788889999995 3334332 12233466 788999999998776422235 455666666654
No 37
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=66.93 E-value=4.6 Score=29.45 Aligned_cols=46 Identities=13% Similarity=0.252 Sum_probs=32.2
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCC---CCCCCCCCCHHHHhcCCHHHHhhhC
Q psy15116 7 PRQWSESNVAQWLCWAIREFSLEG---VTLHQFYMRGKDICSMGKESFLARA 55 (78)
Q Consensus 7 P~~Ws~~~V~~Wl~W~~~ef~L~~---~~~~~f~m~G~~LC~lt~edF~~~~ 55 (78)
-..|+.++|.+||... .+++. -.+.....+|+.|..||.+|...-.
T Consensus 36 fs~W~~~~V~aWLe~~---iGmp~~Yv~~~r~nvkSG~~Ll~LSd~dLekeL 84 (334)
T 3tac_B 36 FAQWDGPTVVAWLELW---LGMPAWYVAACRANVKSGAIMSALSDTEIQREI 84 (334)
T ss_dssp GGGCCHHHHHHHHHHT---TCCCHHHHHHHHHHCCSHHHHHTCCHHHHHHTT
T ss_pred hhhCCcHHHHHHHHHH---hcChHHHHHHHHHHccchHHHHhCCHHHHHHHh
Confidence 3689999999999731 23322 1123446889999999999987444
No 38
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=66.30 E-value=3.4 Score=30.12 Aligned_cols=62 Identities=21% Similarity=0.333 Sum_probs=33.6
Q ss_pred cCCCccccCHHHHHHHHHHH-HHhcCCCCCCCCCCCCCHHHHhc---CCHHHHhhh--CCCCChHHHHHHHH
Q psy15116 3 TLDDPRQWSESNVAQWLCWA-IREFSLEGVTLHQFYMRGKDICS---MGKESFLAR--APPFMGDILWEHLE 68 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~-~~ef~L~~~~~~~f~m~G~~LC~---lt~edF~~~--~p~~~GdiL~~hL~ 68 (78)
-+.||..||.+.|.+|++=. -+||. .|+..-.+.|.-+.. ++-+.+-.. .|+ ..-++-.||+
T Consensus 242 ~~~dv~vWtn~rV~~Wl~sIdL~EYA---~NL~~SGVHGal~~Le~~F~~~~lA~~L~IP~-~kt~~RrhL~ 309 (334)
T 3tac_B 242 EIKDVLVWSNDRVIRWIQAIGLREYA---NNILESGVHGSLIALDENFDYSSLALLLQIPT-QNTQARQILE 309 (334)
T ss_dssp SSCCGGGCCHHHHHHHHHHTTCHHHH---GGGTTSCCCHHHHHHCTTCCHHHHHHHTTCCT-TCHHHHHHHH
T ss_pred cCccccccccHHHHHHHHhcChHHhh---hhhhhcCccceeeeccCCCCHHHHHHHhCCCC-CchhhHHHHH
Confidence 36799999999999999833 13332 222233455654432 223333222 343 4555556654
No 39
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.15 E-value=4.3 Score=24.76 Aligned_cols=33 Identities=18% Similarity=0.533 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCC---CCHHHHhcC
Q psy15116 12 ESNVAQWLCWAIREFSLEGVTLHQFY---MRGKDICSM 46 (78)
Q Consensus 12 ~~~V~~Wl~W~~~ef~L~~~~~~~f~---m~G~~LC~l 46 (78)
++....|.+...+.| +++..+.|. -||.++|.+
T Consensus 11 ~~~LL~W~~~~~~~y--~~v~v~nFs~sw~dG~af~aL 46 (119)
T 2d89_A 11 SQSLLVWCKEVTKNY--RGVKITNFTTSWRNGLSFCAI 46 (119)
T ss_dssp HHHHHHHHHHHTTTC--SSCCCCCSSHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHhccC--CCCCCCCccccccccHHHHHH
Confidence 456778888777776 356667775 599999987
No 40
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=62.35 E-value=1.3 Score=25.31 Aligned_cols=51 Identities=14% Similarity=0.176 Sum_probs=29.4
Q ss_pred CccccC-HHHHHHHHHHHHHhcCCCCC--CCCCCC-CCHHHHhcCCHHHHhhhCCCCCh
Q psy15116 6 DPRQWS-ESNVAQWLCWAIREFSLEGV--TLHQFY-MRGKDICSMGKESFLARAPPFMG 60 (78)
Q Consensus 6 DP~~Ws-~~~V~~Wl~W~~~ef~L~~~--~~~~f~-m~G~~LC~lt~edF~~~~p~~~G 60 (78)
+...|+ ..+|.+||.- -+|... .+..-. ++|..|+.||.+|....--...|
T Consensus 8 ~~p~~~~~~~V~~WL~~----lgL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~G 62 (83)
T 2qkq_A 8 RQPHYSAFGSVGEWLRA----IKMGRYEESFAAAGFGSFELVSQISAEDLLRIGVTLAG 62 (83)
T ss_dssp ------CCSSHHHHHHH----TTCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHH
T ss_pred CCCCCCccchHHHHHHH----CCCHHHHHHHHHcCCCcHHHHhhCCHHHHHHCCCCCHH
Confidence 333454 5799999972 233321 122224 78999999999999886432245
No 41
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=60.46 E-value=1.5 Score=26.28 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=34.4
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCCHHHHh---cCCHHHHhhhCCCCCh--HHHHHHHHHHH
Q psy15116 7 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDIC---SMGKESFLARAPPFMG--DILWEHLEILQ 71 (78)
Q Consensus 7 P~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~G~~LC---~lt~edF~~~~p~~~G--diL~~hL~~lk 71 (78)
-..|+..+|.+||.-. +|+.. .+..-.++|.+++ .||.+|....-=...| ..+...++.||
T Consensus 17 ~~~w~~~~V~~WL~~i----gL~qY~~~F~~~gid~~~~l~~~~lt~~DL~~lGI~~~GhRkkIl~ai~~L~ 84 (103)
T 2ke7_A 17 GPRCPVQTVGQWLESI----GLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLP 84 (103)
T ss_dssp ------CCTTHHHHHT----TCTTCHHHHHHTTCCCHHHHHTTCCCHHHHHHHTCCCHHHHHHHHHHHHHSC
T ss_pred ccCCCHhHHHHHHHHC----CCHHHHHHHHHcCCCcHHHHhcccCCHHHHhHCCCCCHHHHHHHHHHHHHHH
Confidence 4689999999999733 34332 1223368899875 9999998876432345 23444555554
No 42
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=58.84 E-value=13 Score=21.83 Aligned_cols=32 Identities=19% Similarity=0.125 Sum_probs=26.5
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHHHHHhcccc
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEILQKEYLVI 77 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~~ 77 (78)
+|..++.+..|..+..+|..||..|.+.++|.
T Consensus 43 ~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~ 74 (111)
T 3df8_A 43 QNFNDIRSSIPGISSTILSRRIKDLIDSGLVE 74 (111)
T ss_dssp BCHHHHHHTSTTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHccCCCHHHHHHHHHHHHHCCCEE
Confidence 34777888886568999999999999999873
No 43
>3u1d_A Uncharacterized protein; GNTR-superfamily, structural genomics, PSI-biology, midwest for structural genomics, MCSG; 1.80A {Halomicrobium mukohataei}
Probab=56.43 E-value=14 Score=23.75 Aligned_cols=31 Identities=26% Similarity=0.213 Sum_probs=24.2
Q ss_pred CHHHHhhhCCCCChHHHHHHHHHHHHhcccc
Q psy15116 47 GKESFLARAPPFMGDILWEHLEILQKEYLVI 77 (78)
Q Consensus 47 t~edF~~~~p~~~GdiL~~hL~~lk~~~~~~ 77 (78)
|-++.....|..+-.++|.||..|+..++|-
T Consensus 47 ta~eL~~~l~~lS~aTVyrhL~~L~eaGLV~ 77 (151)
T 3u1d_A 47 SVEELLYRNPDETEANLRYHVDELVDRGIVE 77 (151)
T ss_dssp CHHHHHHHCTTSCHHHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHCCCeE
Confidence 4455566677457899999999999998873
No 44
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=56.40 E-value=5.2 Score=23.29 Aligned_cols=47 Identities=13% Similarity=0.091 Sum_probs=29.2
Q ss_pred CCCccccCHHHHHHHHHHHHHhcCCCCCCCCCC---CCC-HHHHhcCCHHHHhhhC
Q psy15116 4 LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQF---YMR-GKDICSMGKESFLARA 55 (78)
Q Consensus 4 P~DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f---~m~-G~~LC~lt~edF~~~~ 55 (78)
|..+..|+...|.+||.-. .|... .+.| .++ ...|+.||.+|....-
T Consensus 18 ~~~~~~~~~~~V~eWL~~l----gL~qY-~~~F~~~g~~~le~l~~lt~~DL~~lG 68 (86)
T 2k4p_A 18 GSHMSGLGEAGMSAWLRAI----GLERY-EEGLVHNGWDDLEFLSDITEEDLEEAG 68 (86)
T ss_dssp ----CCCCSCSSHHHHHTT----TCGGG-HHHHHTTTCCCHHHHTTCCHHHHHHTT
T ss_pred CCcCCCCCcCcHHHHHHHC----CCHHH-HHHHHHcCCChHHHHHhCCHHHHHHCC
Confidence 4567789999999999722 23221 1233 443 5778899999998764
No 45
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=55.64 E-value=15 Score=22.21 Aligned_cols=36 Identities=11% Similarity=0.330 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhcC-CCCCCCCCCCCCHHHHhcCC
Q psy15116 12 ESNVAQWLCWAIREFS-LEGVTLHQFYMRGKDICSMG 47 (78)
Q Consensus 12 ~~~V~~Wl~W~~~ef~-L~~~~~~~f~m~G~~LC~lt 47 (78)
++....|.+...+.|. +.-.|++.---||.++|.+=
T Consensus 9 ~~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLi 45 (116)
T 1wyl_A 9 QEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALV 45 (116)
T ss_dssp HHHHHHHHHHHHHHSTTCCCSCTTTTTTSSHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHH
Confidence 4567888888877773 33333333236899999873
No 46
>2jpf_A Hypothetical protein; all alpha helical protein, type III secretion effector protein, structural genomics; NMR {Bordetella parapertussis}
Probab=54.94 E-value=5.2 Score=24.55 Aligned_cols=23 Identities=35% Similarity=0.484 Sum_probs=18.9
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHH
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEI 69 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~ 69 (78)
-..++|..|... +-|.||+||+-
T Consensus 67 rrpdeftarlqq-stdalyshlea 89 (127)
T 2jpf_A 67 RRPDEFTARLQQ-STDALYSHLEA 89 (127)
T ss_dssp HCHHHHHHHHHT-TTHHHHHHHHH
T ss_pred cCcHHHHHHHHH-hHHHHHHHHHH
Confidence 357889988875 89999999974
No 47
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=53.08 E-value=6.7 Score=22.12 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHhcCCCCC--CCCCCCC-CHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHH
Q psy15116 11 SESNVAQWLCWAIREFSLEGV--TLHQFYM-RGKDICSMGKESFLARAPPFMG--DILWEHLEILQK 72 (78)
Q Consensus 11 s~~~V~~Wl~W~~~ef~L~~~--~~~~f~m-~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~ 72 (78)
+..+|.+||.-. +|... .+..-.+ ++..|+.||.+|....--...| ..+...++.||.
T Consensus 10 ~~~~v~~WL~~l----gL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhrkkIl~ai~~l~~ 72 (82)
T 1b4f_A 10 SFNTVDEWLEAI----KMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVMRA 72 (82)
T ss_dssp CCSSHHHHHHHT----TCGGGHHHHHHTTCCSHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHC----CCHHHHHHHHHcCCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 446899999732 23221 1222245 7889999999999976432246 334455555554
No 48
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=52.20 E-value=11 Score=20.44 Aligned_cols=30 Identities=3% Similarity=0.177 Sum_probs=25.0
Q ss_pred CHHHHhcCCHHHHhhhCCCCC-hHHHHHHHH
Q psy15116 39 RGKDICSMGKESFLARAPPFM-GDILWEHLE 68 (78)
Q Consensus 39 ~G~~LC~lt~edF~~~~p~~~-GdiL~~hL~ 68 (78)
+=++++..|.|+.....+... +..+|++|+
T Consensus 26 s~~~i~~As~eeL~~vig~~~~A~~I~~~l~ 56 (63)
T 2a1j_A 26 NIAELAALSQDELTSILGNAANAKQLYDFIH 56 (63)
T ss_dssp SHHHHHTCCHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CHHHHHHCCHHHHHHHcCchHHHHHHHHHHh
Confidence 457899999999998877656 889999885
No 49
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.03 E-value=24 Score=20.57 Aligned_cols=61 Identities=15% Similarity=0.235 Sum_probs=37.2
Q ss_pred ccccCHHHHHHHHHHHHHhcCCCCCCCCCC---CCC-HHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116 7 PRQWSESNVAQWLCWAIREFSLEGVTLHQF---YMR-GKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 72 (78)
Q Consensus 7 P~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f---~m~-G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~ 72 (78)
|..-+..+|.+||. ...|... .+.| .++ +..|+.||.+|....-=...|+ .+...++.||.
T Consensus 17 p~~~~~~~V~~WL~----~lgL~~Y-~~~F~~~~~~~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~l~~ 83 (99)
T 2eao_A 17 PDFTAFTTVDDWLS----AIKMVQY-RDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSMRV 83 (99)
T ss_dssp CCTTSCCBHHHHHH----TTTCGGG-HHHHHHHTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHH----HCCcHHH-HHHHHHcCCChHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 33334568999997 2223221 1233 567 8899999999998765332463 34456666654
No 50
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=47.65 E-value=8.6 Score=22.37 Aligned_cols=63 Identities=8% Similarity=0.150 Sum_probs=35.7
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCCC--CCCCCCC-CHHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116 6 DPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYM-RGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 72 (78)
Q Consensus 6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m-~G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~ 72 (78)
.|..-+...|.+||.-. +|... .+..-.+ ++..|+.||.+|....-=...|+ .+...++.||.
T Consensus 20 ~p~~~~~~~V~~WL~~l----gL~~Y~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~L~~ 87 (94)
T 1b0x_A 20 SPEFSAVVSVGDWLQAI----KMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQAMRT 87 (94)
T ss_dssp ---CCSSCCHHHHHHHT----TCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhHHHHHHHHC----CcHHHHHHHHHcCCCCHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 34444556899999732 23221 1222245 78899999999988765332463 34455555553
No 51
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=46.94 E-value=18 Score=22.24 Aligned_cols=34 Identities=15% Similarity=0.378 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCC---CCCHHHHhcCC
Q psy15116 12 ESNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSMG 47 (78)
Q Consensus 12 ~~~V~~Wl~W~~~ef~L~~~~~~~f---~m~G~~LC~lt 47 (78)
++-...|.+...+.|. +++.++| --||.++|.+=
T Consensus 9 k~~LL~W~q~~~~~y~--~v~V~nFs~sw~DG~Af~aLi 45 (127)
T 1wyq_A 9 KDALLLWCQMKTAGYP--NVNVHNFTTSWRDGLAFNAIV 45 (127)
T ss_dssp THHHHHHHHHHHHTSS--SCCCSCSSTTSSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC--CCCCCCCcccccccHHHHHHH
Confidence 3456777777777663 3445555 37899999873
No 52
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=46.63 E-value=17 Score=22.00 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCC---CCHHHHhcCC
Q psy15116 14 NVAQWLCWAIREFSLEGVTLHQFY---MRGKDICSMG 47 (78)
Q Consensus 14 ~V~~Wl~W~~~ef~L~~~~~~~f~---m~G~~LC~lt 47 (78)
-...|.+...+.|. +++.++|. -||.++|.+=
T Consensus 12 ~LL~W~q~~~~~y~--~v~v~nFs~sw~DG~af~aLi 46 (118)
T 1bhd_A 12 ILLSWVRQTTRPYS--QVNVLNFTTSWTDGLAFNAVL 46 (118)
T ss_dssp HHHHHHHHHHTTST--TCCCCSSSGGGTTSHHHHHHH
T ss_pred HHHHHHHHHhccCC--CCCCCCCcccccCcHHHHHHH
Confidence 35677777777663 34456664 6999999883
No 53
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.40 E-value=6.6 Score=22.55 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-HHHHhcCCHHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15116 11 SESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 72 (78)
Q Consensus 11 s~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~-G~~LC~lt~edF~~~~p~~~Gd--iL~~hL~~lk~ 72 (78)
+..+|.+||.-. +|... .+..-.++ +..|+.||.+|+...-=...|. .+...++.||.
T Consensus 11 ~~~~V~~WL~~l----gL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhRkkIl~ai~~l~~ 73 (88)
T 2e8n_A 11 PFRTVSEWLESI----KMQQYTEHFMAAGYTAIEKVVQMTNDDVKRIGVRLPGHQKRIAYSLLGLKD 73 (88)
T ss_dssp SCSSHHHHHHHT----TCGGGHHHHHHHTCSSHHHHTTSCTTHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHC----CCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 347899999732 33322 12223567 8999999999988764322453 34455565554
No 54
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=46.21 E-value=12 Score=23.04 Aligned_cols=32 Identities=19% Similarity=0.542 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCC---CCCHHHHhcC
Q psy15116 13 SNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSM 46 (78)
Q Consensus 13 ~~V~~Wl~W~~~ef~L~~~~~~~f---~m~G~~LC~l 46 (78)
+....|.+...+.|. +++.++| --||.++|.+
T Consensus 10 ~~LL~W~q~~~~~y~--~v~V~nFs~sw~DG~af~aL 44 (128)
T 2d87_A 10 QMLLDWCRAKTRGYE--HVDIQNFSSSWSDGMAFCAL 44 (128)
T ss_dssp HHHHHHHHHHSSSCT--TCCCSCTTTTTTSSHHHHHH
T ss_pred HHHHHHHHHHhccCC--CCCCCCccccccccHHHHHH
Confidence 456677776666662 3445555 3689999987
No 55
>4g6q_A Putative uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.08A {Kribbella flavida}
Probab=45.49 E-value=17 Score=23.30 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=21.1
Q ss_pred HHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116 49 ESFLARAPPFMGDILWEHLEILQKEYLV 76 (78)
Q Consensus 49 edF~~~~p~~~GdiL~~hL~~lk~~~~~ 76 (78)
.+.....+..+...++.||..|+++++|
T Consensus 40 ~~l~~~l~~~~~~~~s~Hl~~L~~aglv 67 (182)
T 4g6q_A 40 RELAELLPDVATTTLYRQVGILVKAGVL 67 (182)
T ss_dssp HHHHHHCTTBCHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHCCCe
Confidence 3444455434678999999999999987
No 56
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=43.80 E-value=7.3 Score=24.91 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHHhcCCCC-CCCCCCCCCHHHHhcC
Q psy15116 11 SESNVAQWLCWAIREFSLEG-VTLHQFYMRGKDICSM 46 (78)
Q Consensus 11 s~~~V~~Wl~W~~~ef~L~~-~~~~~f~m~G~~LC~l 46 (78)
..+++++|+.-+..+ ++++ .++..-=.||.-||.|
T Consensus 12 ~~~e~~~WIe~~l~~-~l~~~~~l~~~LkdGvvLCkL 47 (159)
T 1p2x_A 12 RVDEAKKWIEECLGT-DLGPTSTFEQSLRNGVVLALL 47 (159)
T ss_dssp HHHHHHHHHHHHHTS-CCCCGGGHHHHTTTSHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CCCChHHHHHHHcchHHHHHH
Confidence 357899999977654 4442 2223334778888876
No 57
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=43.56 E-value=16 Score=21.77 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCC---CCHHHHhcCC
Q psy15116 13 SNVAQWLCWAIREFSLEGVTLHQFY---MRGKDICSMG 47 (78)
Q Consensus 13 ~~V~~Wl~W~~~ef~L~~~~~~~f~---m~G~~LC~lt 47 (78)
+-...|.+...+.| ++++.++|. -||.++|.+=
T Consensus 6 ~~LL~W~q~~~~~y--~~v~v~nFs~sw~dG~af~aLi 41 (109)
T 1bkr_A 6 DALLLWCQMKTAGY--PNVNIHNFTTSWRDGMAFNALI 41 (109)
T ss_dssp HHHHHHHHHHTTTC--TTCCCSSSSGGGTTSHHHHHHH
T ss_pred HHHHHHHHHHHccC--CCCCCCCCcccccccHHHHHHH
Confidence 34556666555545 345556663 7899999873
No 58
>1z00_B DNA repair endonuclease XPF; helix-hairpin-helix, hydrolase; HET: DNA; NMR {Homo sapiens} SCOP: a.60.2.5 PDB: 2aq0_A*
Probab=42.67 E-value=11 Score=21.81 Aligned_cols=29 Identities=3% Similarity=0.180 Sum_probs=24.5
Q ss_pred HHHHhcCCHHHHhhhCCCCC-hHHHHHHHH
Q psy15116 40 GKDICSMGKESFLARAPPFM-GDILWEHLE 68 (78)
Q Consensus 40 G~~LC~lt~edF~~~~p~~~-GdiL~~hL~ 68 (78)
=+++|.+|.|+.....+... +..+|++|+
T Consensus 41 l~~i~~AS~eEL~~vig~~~~A~~I~~~l~ 70 (84)
T 1z00_B 41 IAELAALSQDELTSILGNAANAKQLYDFIH 70 (84)
T ss_dssp HHHHHHSCHHHHHHHHSCHHHHHHHHHHHT
T ss_pred HHHHHHCCHHHHHHHhCchHHHHHHHHHHH
Confidence 36899999999999987656 899999884
No 59
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=38.59 E-value=11 Score=23.62 Aligned_cols=35 Identities=9% Similarity=0.237 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhcCCCCC-----CCCCCCCCHHHHhcCC
Q psy15116 12 ESNVAQWLCWAIREFSLEGV-----TLHQFYMRGKDICSMG 47 (78)
Q Consensus 12 ~~~V~~Wl~W~~~ef~L~~~-----~~~~f~m~G~~LC~lt 47 (78)
++++++||+-+..+ +++.+ ++..--.||.-||.|-
T Consensus 11 e~e~~~WIe~~l~~-~l~~~~~~~~~f~~~LkDGvvLCkL~ 50 (144)
T 1ujo_A 11 EERLVEWIVVQCGP-DVGRPDRGRLGFQVWLKNGVILSKLV 50 (144)
T ss_dssp HHHHHHHHHHHHCT-TTCCCCSSSSSHHHHTTSSHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCCcCCcHHHHHHHHcchHHHHHHH
Confidence 57899999877654 34322 2222257899999873
No 60
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=37.88 E-value=18 Score=22.75 Aligned_cols=58 Identities=22% Similarity=0.191 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCC--CCCCCCCHHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHHH
Q psy15116 11 SESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQK 72 (78)
Q Consensus 11 s~~~V~~Wl~W~~~ef~L~~~~--~~~f~m~G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk~ 72 (78)
+.+.|.+||. ..+|+... +..-.++|..|..||.+|+...--...| ..+...++.|+.
T Consensus 9 ~~~~V~~WL~----~lgL~~Y~~~F~~~g~d~~~l~~lt~~DL~~lGIt~~gHrkkil~ai~~L~~ 70 (149)
T 3sei_A 9 SSEAVSQWLT----AFQLQLYAPNFISAGYDLPTISRMTPEDLTAIGVTKPGHRKKIAAEISGLSI 70 (149)
T ss_dssp HHHHHHHHHH----TTTCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCSHHHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHH----HCCcHHHHHHHHHcCCCHHHHccCCHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 3578999995 33443321 2222466999999999999765432234 344555555543
No 61
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=34.06 E-value=21 Score=21.71 Aligned_cols=47 Identities=9% Similarity=0.209 Sum_probs=38.0
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhC
Q psy15116 6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARA 55 (78)
Q Consensus 6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~ 55 (78)
|++.=|=++|..++ +..|+|..+-+..+.-+|-..|--|+++|.++.
T Consensus 32 ~~~~~tweel~~mv---k~~f~L~~~~IkY~DEenD~V~i~Sq~E~eEAl 78 (101)
T 1wj6_A 32 DPENTTWADIEAMV---KVSFDLNTIQIKYLDEENEEVSINSQGEYEEAL 78 (101)
T ss_dssp CTTTSCHHHHHHHH---HHHHCCSSBCCEEECTTSCEECCCSHHHHHHHH
T ss_pred CCCCCCHHHHHHHH---HHHcCCCceEEEEecCCCCEEEEecHHHHHHHH
Confidence 55555667777766 789999988888889999999999999998765
No 62
>1yg2_A Gene activator APHA; virulence factor, winged helix, transcripti factor, transcription; 2.20A {Vibrio cholerae} SCOP: a.4.5.61
Probab=33.26 E-value=28 Score=21.91 Aligned_cols=39 Identities=18% Similarity=0.048 Sum_probs=26.5
Q ss_pred CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116 37 YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLV 76 (78)
Q Consensus 37 ~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~ 76 (78)
+++|.+|...=.+.+-...+. +-..+|.+|..|.+.++|
T Consensus 15 ~~~gyel~~~l~~~~~~~~~~-s~~~ly~~L~~Le~~GlI 53 (179)
T 1yg2_A 15 DATGYDITKEFSASIGYFWKA-SHQQVYRELNKMGEQGLV 53 (179)
T ss_dssp CBCHHHHHHHHTTGGGGTCCC-CHHHHHHHHHHHHHTTSE
T ss_pred CCCHHHHHHHHHHHhCCccCC-CcCcHHHHHHHHHHCCCe
Confidence 578988864332223333342 567999999999998876
No 63
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=32.61 E-value=63 Score=18.37 Aligned_cols=31 Identities=13% Similarity=0.191 Sum_probs=25.0
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEILQKEYLV 76 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~ 76 (78)
++..++.++.|..+...+..+|..|.+.++|
T Consensus 28 ~~~~eLa~~l~~is~~tls~~L~~Le~~GlI 58 (107)
T 2hzt_A 28 KRTSELKRLMPNITQKMLTQQLRELEADGVI 58 (107)
T ss_dssp BCHHHHHHHCTTSCHHHHHHHHHHHHHTTSE
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHHHCCCE
Confidence 4666777777546889999999999998877
No 64
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=30.33 E-value=18 Score=20.66 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=23.1
Q ss_pred CCcCCCccccCH---HHHHHHHHHHHHhcCCCCC
Q psy15116 1 MYTLDDPRQWSE---SNVAQWLCWAIREFSLEGV 31 (78)
Q Consensus 1 ~~vP~DP~~Ws~---~~V~~Wl~W~~~ef~L~~~ 31 (78)
||+|.|| .|++ +++.++|...+++-.|..+
T Consensus 34 mf~~~~~-~~~~it~~eL~~fL~~~v~e~kL~~~ 66 (74)
T 1ldd_A 34 ITVPKDW-GYNRITLQQLEGYLNTLADEGRLKYI 66 (74)
T ss_dssp HHSCGGG-CCTTCCHHHHHHHHHHHHHTTSEECC
T ss_pred HhCCCCC-CCCcCCHHHHHHHHHHHHhCCeEEEe
Confidence 4678875 3455 9999999999998887543
No 65
>2wa7_A Filamin-B; disease mutation, skeletal dysplasia, structural protein, actin-crosslinking, myogenesis, cytoskeleton; 1.85A {Homo sapiens} PDB: 2wa5_A 2wa6_A 3fer_A
Probab=30.29 E-value=28 Score=23.34 Aligned_cols=26 Identities=19% Similarity=0.451 Sum_probs=17.0
Q ss_pred HHHHHHhcCCCCCCCCCCC---CCHHHHhcC
Q psy15116 19 LCWAIREFSLEGVTLHQFY---MRGKDICSM 46 (78)
Q Consensus 19 l~W~~~ef~L~~~~~~~f~---m~G~~LC~l 46 (78)
|+|+.+++ +++..+.|. -||..+|.+
T Consensus 149 L~W~~~~~--~~~~v~nFs~s~~dG~a~~aL 177 (245)
T 2wa7_A 149 LGWIQNKI--PYLPITNFNQNWQDGKALGAL 177 (245)
T ss_dssp HHHHHHHS--TTSCCCCSSGGGTTSHHHHHH
T ss_pred HHHHHHhC--CCCCCCCCcccchhhHHHHHH
Confidence 44555543 355666664 789999987
No 66
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=29.86 E-value=42 Score=19.75 Aligned_cols=39 Identities=15% Similarity=0.059 Sum_probs=26.6
Q ss_pred CCCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116 37 YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLV 76 (78)
Q Consensus 37 ~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~ 76 (78)
++.|.+|..-=.+.+-.... .+-..+|.+|..|.+..+|
T Consensus 25 ~~~Gyei~~~l~~~~~~~~~-i~~gtly~~L~rLe~~GlI 63 (116)
T 3f8b_A 25 DNYVYGIIKQVKEASNGEME-LNEATLYTIFKRLEKDGII 63 (116)
T ss_dssp CBCHHHHHHHHHHHTTTCCC-CCHHHHHHHHHHHHHTTSE
T ss_pred CCCHHHHHHHHHHHhCCCCC-CCcchHHHHHHHHHHCCCE
Confidence 57788886543333322233 3678999999999998876
No 67
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=29.24 E-value=12 Score=24.76 Aligned_cols=34 Identities=18% Similarity=0.347 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcCCCC-CCCCCCCCCHHHHhcCC
Q psy15116 13 SNVAQWLCWAIREFSLEG-VTLHQFYMRGKDICSMG 47 (78)
Q Consensus 13 ~~V~~Wl~W~~~ef~L~~-~~~~~f~m~G~~LC~lt 47 (78)
+++++||+-+..+ ++++ .++..-=.||.-||.|-
T Consensus 50 ~e~~~WIe~~lg~-~l~~~~~l~~~LrdGvvLCkL~ 84 (193)
T 3i6x_A 50 EEAKRWMEACLGE-DLPPTTELEEGLRNGVYLAKLG 84 (193)
T ss_dssp HHHHHHHHHHHSS-CCCCGGGHHHHHTTSHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCChHHHHHHhccHHHHHHHH
Confidence 5789999877654 4543 12333347888898873
No 68
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=29.09 E-value=72 Score=19.44 Aligned_cols=31 Identities=19% Similarity=0.196 Sum_probs=26.9
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEILQKEYLV 76 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~ 76 (78)
++..++.+..|..+..+|-.+|..|.+.++|
T Consensus 40 ~rf~eL~~~l~gIs~~~Ls~~L~~Le~~GLV 70 (131)
T 4a5n_A 40 KRFNEFRRICPSITQRMLTLQLRELEADGIV 70 (131)
T ss_dssp BCHHHHHHHCTTSCHHHHHHHHHHHHHTTSE
T ss_pred cCHHHHHHHhcccCHHHHHHHHHHHHHCCCE
Confidence 4677888889667899999999999999887
No 69
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=28.58 E-value=72 Score=16.99 Aligned_cols=36 Identities=8% Similarity=0.144 Sum_probs=24.2
Q ss_pred CCHHHHhcCCHHHHhhhCCCCChHHHHHHHHHHHHhcccc
Q psy15116 38 MRGKDICSMGKESFLARAPPFMGDILWEHLEILQKEYLVI 77 (78)
Q Consensus 38 m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~~ 77 (78)
++-.+|+.. +....|..+-.+.|.+|+.|.+.++|.
T Consensus 34 ~s~~el~~~----l~~~~~~is~~TVyR~L~~L~~~Glv~ 69 (83)
T 2fu4_A 34 VSAEDLYKR----LIDMGEEIGLATVYRVLNQFDDAGIVT 69 (83)
T ss_dssp BCHHHHHHH----HHHTTCCCCHHHHHHHHHHHHHHTSEE
T ss_pred CCHHHHHHH----HHHhCCCCCHhhHHHHHHHHHHCCCeE
Confidence 445555443 223334457799999999999988773
No 70
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=28.10 E-value=18 Score=21.37 Aligned_cols=47 Identities=9% Similarity=0.209 Sum_probs=37.6
Q ss_pred CccccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCCHHHHhhhC
Q psy15116 6 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARA 55 (78)
Q Consensus 6 DP~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt~edF~~~~ 55 (78)
|++.=|=++|..++ ...|+|.++-+.-+.-+|-..|--|+.+|.++.
T Consensus 24 ~~~~~tweel~~mv---k~~f~L~~~~ikY~DEenD~v~i~Sq~E~eEAl 70 (87)
T 2bkf_A 24 DPENTTWADIEAMV---KVSFDLNTIQIKYLDEENEEVSINSQGEYEEAL 70 (87)
T ss_dssp CGGGCCHHHHHHHH---HHHHTCSSEEEEEECTTSCEEEECSHHHHHHHH
T ss_pred cCCCCCHHHHHHHH---HHHcCCCceEEEEEcCCCCEEEEecHHHHHHHH
Confidence 55555666777765 789999988778888999999999999988765
No 71
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=27.78 E-value=37 Score=19.42 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-HHHHhcCCHHHHhhhCCCCCh--HHHHHHHHHHH
Q psy15116 11 SESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQ 71 (78)
Q Consensus 11 s~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~-G~~LC~lt~edF~~~~p~~~G--diL~~hL~~lk 71 (78)
+...|.+||. ..+|... .+..-.++ ...|..||.+|....--...| ..+...++.||
T Consensus 20 ~~~~V~~WL~----~lgL~qY~~~F~~~g~d~le~l~~lt~~DL~~LGIt~~GHRkkIL~ai~~Lr 81 (86)
T 3kka_C 20 PFRTVSEWLE----SIKMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLK 81 (86)
T ss_dssp ---CHHHHHH----HTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHCC
T ss_pred chhHHHHHHH----hCCcHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 4578999995 3344332 12233466 577999999999876432235 34445555544
No 72
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=27.21 E-value=46 Score=18.58 Aligned_cols=31 Identities=13% Similarity=0.064 Sum_probs=22.5
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHHHHHhcccc
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEILQKEYLVI 77 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~~ 77 (78)
++-.+..+...- +-..+..||..|++.++|.
T Consensus 37 ~~~~ela~~l~i-s~~tvs~~L~~L~~~Glv~ 67 (102)
T 3pqk_A 37 FSVGELEQQIGI-GQPTLSQQLGVLRESGIVE 67 (102)
T ss_dssp BCHHHHHHHHTC-CTTHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHCc-CHHHHHHHHHHHHHCCCeE
Confidence 355555555653 5668999999999998873
No 73
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=27.20 E-value=73 Score=17.55 Aligned_cols=31 Identities=16% Similarity=0.252 Sum_probs=23.9
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHHHHHhcccc
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEILQKEYLVI 77 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~~ 77 (78)
++..+..+... .+-..++.||..|.+..+|.
T Consensus 44 ~~~~eLa~~l~-is~~tv~~~L~~L~~~Glv~ 74 (96)
T 1y0u_A 44 RSEEEIMQTLS-LSKKQLDYHLKVLEAGFCIE 74 (96)
T ss_dssp CCHHHHHHHHT-CCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHC-cCHHHHHHHHHHHHHCCCEE
Confidence 45666666666 37789999999999998874
No 74
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=27.01 E-value=43 Score=18.48 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=22.2
Q ss_pred CHHHHhhhCCCCChHHHHHHHHHHHHhcccc
Q psy15116 47 GKESFLARAPPFMGDILWEHLEILQKEYLVI 77 (78)
Q Consensus 47 t~edF~~~~p~~~GdiL~~hL~~lk~~~~~~ 77 (78)
|..+..+... .+-..++.||..|++.++|.
T Consensus 38 ~~~ela~~l~-is~~tvs~~L~~L~~~Glv~ 67 (98)
T 3jth_A 38 SVGELCAKLQ-LSQSALSQHLAWLRRDGLVT 67 (98)
T ss_dssp EHHHHHHHHT-CCHHHHHHHHHHHHHTTSEE
T ss_pred CHHHHHHHHC-cCHHHHHHHHHHHHHCCCeE
Confidence 4445555555 36789999999999998873
No 75
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=26.60 E-value=15 Score=22.78 Aligned_cols=36 Identities=14% Similarity=0.335 Sum_probs=23.4
Q ss_pred cccCHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCC
Q psy15116 8 RQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMG 47 (78)
Q Consensus 8 ~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt 47 (78)
..+|+.++.+|++=+... +++.+. ---||..+|.|-
T Consensus 3 ~~~sr~ElL~WIN~~L~~-~~~kiE---~L~~Ga~yCqlm 38 (123)
T 2qjz_A 3 DNLSRHDMLAWINESLQL-NLTKIE---QLCSGAAYCQFM 38 (123)
T ss_dssp CCCCHHHHHHHHHHHHTC-CCCCGG---GGGGSHHHHHHH
T ss_pred ccccHHHHHHHHHHHHCC-CCchHH---HcCchHHHHHHH
Confidence 357899999999755422 222221 136899999984
No 76
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=25.90 E-value=44 Score=23.71 Aligned_cols=28 Identities=18% Similarity=0.429 Sum_probs=19.8
Q ss_pred HHHHHHHHhcCCCCCCCCCCC---CCHHHHhcC
Q psy15116 17 QWLCWAIREFSLEGVTLHQFY---MRGKDICSM 46 (78)
Q Consensus 17 ~Wl~W~~~ef~L~~~~~~~f~---m~G~~LC~l 46 (78)
..|+|+.+++ ++++.+.|. -||.++|.|
T Consensus 144 ~LL~W~~~~~--~~~~v~nF~~sw~DG~af~aL 174 (347)
T 4b7l_A 144 RLLGWIQNKI--PYLPITNFNQNWQDGKALGAL 174 (347)
T ss_dssp HHHHHHHHHC--TTSCCCCSSGGGTTSHHHHHH
T ss_pred HHHHHHHhhC--CCcccCCCCCCccchHHHHHH
Confidence 4677776654 456666663 689999998
No 77
>2rr8_A Iqgap1 protein; F-actin binding protein, protein binding; NMR {Homo sapiens}
Probab=25.02 E-value=8.8 Score=25.26 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHhcCCCC-CCCCCCCCCHHHHhcC
Q psy15116 13 SNVAQWLCWAIREFSLEG-VTLHQFYMRGKDICSM 46 (78)
Q Consensus 13 ~~V~~Wl~W~~~ef~L~~-~~~~~f~m~G~~LC~l 46 (78)
+++++||.-+..+ ++++ .++..-=.||.-||.|
T Consensus 28 ~e~~~WIe~~lg~-~lp~~~~f~~~LrDGvvLCkL 61 (190)
T 2rr8_A 28 EEAKRWMEACLGE-DLPPTTELEEGLRNGVYLAKL 61 (190)
T ss_dssp HHHHHHHHHHSCC-CCCCHHHHHHHHSSHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCChhHHHHHHcchhhHHHH
Confidence 6888888765543 4432 1222224678888876
No 78
>1p5s_A RAS GTPase-activating-like protein RNG2; alpha-helical bundle, cytokine; 2.22A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=24.77 E-value=18 Score=24.12 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhcCCCC-CCCCCCCCCHHHHhcC
Q psy15116 12 ESNVAQWLCWAIREFSLEG-VTLHQFYMRGKDICSM 46 (78)
Q Consensus 12 ~~~V~~Wl~W~~~ef~L~~-~~~~~f~m~G~~LC~l 46 (78)
.+++++||+-+..+ ++++ .++..--.||.-||.|
T Consensus 57 ~~e~~~WIe~~l~~-~l~~~~~f~~~LrDGvvLCkL 91 (203)
T 1p5s_A 57 VDEAKKWIEECLGT-DLGPTSTFEQSLRNGVVLALL 91 (203)
T ss_dssp HHHHHHHHHHHHTS-CCCCGGGHHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCChHHHHHHHcchHHHHHH
Confidence 47888888866543 3432 1222224678888876
No 79
>1wyp_A Calponin 1; CH domain, F-actin binding, all-alpha, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=24.46 E-value=17 Score=22.52 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHhcCC
Q psy15116 12 ESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMG 47 (78)
Q Consensus 12 ~~~V~~Wl~W~~~ef~L~~~~~~~f~m~G~~LC~lt 47 (78)
++++++|++-+..+ ++ +.++..--.||.-||.|-
T Consensus 19 ~~e~~~WIe~~l~~-~~-~~~l~~~L~DGvvLCkL~ 52 (136)
T 1wyp_A 19 EQELREWIEGVTGR-RI-GNNFMDGLKDGIILCEFI 52 (136)
T ss_dssp HHHHHHHHHHHTCC-CC-CSCTTHHHHTSHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CC-cHHHHHHHccHHhHHHHH
Confidence 46888888755432 22 122222247999999873
No 80
>3hoc_A Filamin-A; calponin homology domain, actin binding domain, acetylation, actin-binding, alternative splicing, cytoplasm, cytoskeleton; 2.30A {Homo sapiens} PDB: 3hop_A 3hor_A
Probab=24.20 E-value=38 Score=23.36 Aligned_cols=26 Identities=15% Similarity=0.491 Sum_probs=17.8
Q ss_pred HHHHHHhcCCCCCCCCCCC---CCHHHHhcC
Q psy15116 19 LCWAIREFSLEGVTLHQFY---MRGKDICSM 46 (78)
Q Consensus 19 l~W~~~ef~L~~~~~~~f~---m~G~~LC~l 46 (78)
|+|+.+++ +++..+.|. -||.++|.|
T Consensus 176 L~W~n~~~--~~~~I~nFs~sw~DG~af~aL 204 (272)
T 3hoc_A 176 LGWIQNKL--PQLPITNFSRDWQSGRALGAL 204 (272)
T ss_dssp HHHHHHHC--TTSCCCCSSGGGTTSHHHHHH
T ss_pred HHHHHhhC--CCCCCCChhhcccchHHHHHH
Confidence 44665554 466667773 689999986
No 81
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=23.37 E-value=78 Score=17.89 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=24.4
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHHHHHhccc
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEILQKEYLV 76 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~ 76 (78)
++..++.+..+......+..||..|.+.++|
T Consensus 39 ~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV 69 (107)
T 2fsw_A 39 IRYGELKRAIPGISEKMLIDELKFLCGKGLI 69 (107)
T ss_dssp EEHHHHHHHSTTCCHHHHHHHHHHHHHTTSE
T ss_pred cCHHHHHHHcccCCHHHHHHHHHHHHHCCCE
Confidence 4566677777534789999999999999887
No 82
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.19 E-value=39 Score=21.89 Aligned_cols=34 Identities=12% Similarity=0.345 Sum_probs=22.5
Q ss_pred cccCHHHHHHHHHHHHHhcCCCCCCCCCC--CCCHHHHhcCC
Q psy15116 8 RQWSESNVAQWLCWAIREFSLEGVTLHQF--YMRGKDICSMG 47 (78)
Q Consensus 8 ~~Ws~~~V~~Wl~W~~~ef~L~~~~~~~f--~m~G~~LC~lt 47 (78)
...++.++.+|++=+. ..+++.. --+|..+|.|=
T Consensus 20 ~~~sr~ElL~WIN~~L------~~~~~kiE~L~~GaayCQLm 55 (159)
T 1wyo_A 20 ENLSRHDMLAWVNDSL------HLNYTKIEQLCSGAAYCQFM 55 (159)
T ss_dssp CCCCHHHHHHHHHHHS------CCCCSSGGGGGGCHHHHHHH
T ss_pred CchhHHHHHHHHHHHH------CCCCchhhhcCccHHHHHHH
Confidence 3468999999997443 2222222 36899999873
No 83
>2hqt_A GU4 nucleic-binding protein 1; GST-fold, biosynthetic protein, RNA binding; 1.90A {Saccharomyces cerevisiae} SCOP: a.45.1.2 PDB: 2hrk_B 2hsm_B 2hsn_B
Probab=23.03 E-value=50 Score=20.00 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=14.4
Q ss_pred cCCCccccCHHHHHHHHHHHHH
Q psy15116 3 TLDDPRQWSESNVAQWLCWAIR 24 (78)
Q Consensus 3 vP~DP~~Ws~~~V~~Wl~W~~~ 24 (78)
.|.+|.. +.+|.+|+.|+..
T Consensus 20 ~~~~~~e--~a~V~qWl~fa~~ 39 (124)
T 2hqt_A 20 VSFTKEQ--SAQAAQWESVLKS 39 (124)
T ss_dssp TTCCHHH--HHHHHHHHHHHHT
T ss_pred CCCCHHH--HHHHHHHHHHHcC
Confidence 3444443 6789999999986
No 84
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=22.61 E-value=1.1e+02 Score=18.51 Aligned_cols=23 Identities=17% Similarity=0.391 Sum_probs=18.8
Q ss_pred hCCCCChHHHHHHHHHHHHhccc
Q psy15116 54 RAPPFMGDILWEHLEILQKEYLV 76 (78)
Q Consensus 54 ~~p~~~GdiL~~hL~~lk~~~~~ 76 (78)
..|..+=.+.|.+|+.|.+.++|
T Consensus 50 ~~~~is~aTVYR~L~~L~e~Glv 72 (145)
T 2fe3_A 50 KFPNMSVATVYNNLRVFRESGLV 72 (145)
T ss_dssp GCTTCCHHHHHHHHHHHHHTTSE
T ss_pred hCCCCChhhHHHHHHHHHHCCCE
Confidence 34555678999999999999886
No 85
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=22.25 E-value=88 Score=17.58 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=23.3
Q ss_pred CCHHHHhhhCCCCChHHHHHHHHHHHHhcccc
Q psy15116 46 MGKESFLARAPPFMGDILWEHLEILQKEYLVI 77 (78)
Q Consensus 46 lt~edF~~~~p~~~GdiL~~hL~~lk~~~~~~ 77 (78)
++..+..+... .+-..+..||..|++.++|.
T Consensus 40 ~~~~ela~~l~-is~stvs~~L~~L~~~Glv~ 70 (106)
T 1r1u_A 40 ASVGHISHQLN-LSQSNVSHQLKLLKSVHLVK 70 (106)
T ss_dssp BCHHHHHHHHT-CCHHHHHHHHHHHHHTTSEE
T ss_pred CCHHHHHHHHC-cCHHHHHHHHHHHHHCCCeE
Confidence 35555666665 36788999999999988874
No 86
>2d88_A Protein mical-3; all alpha, calponin homology domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2e9k_A
Probab=22.01 E-value=20 Score=21.79 Aligned_cols=32 Identities=16% Similarity=0.431 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCC---CCHHHHhcCC
Q psy15116 14 NVAQWLCWAIREFSLEGVTLHQFY---MRGKDICSMG 47 (78)
Q Consensus 14 ~V~~Wl~W~~~ef~L~~~~~~~f~---m~G~~LC~lt 47 (78)
....|.+...+.| ++++.+.|. -||.++|.+=
T Consensus 13 ~LL~W~q~~~~~y--~~v~v~nFs~sw~DG~af~aLi 47 (121)
T 2d88_A 13 KLLGWCQRQTDGY--AGVNVTDLTMSWKSGLALCAII 47 (121)
T ss_dssp HHHHHHHHHSTTS--SSCCCCCSSHHHHTSHHHHHHH
T ss_pred HHHHHHHHHhccC--CCCCCCCchhhccccHHHHHHH
Confidence 4566766666666 245566774 6899999873
No 87
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=21.82 E-value=12 Score=21.43 Aligned_cols=43 Identities=12% Similarity=0.193 Sum_probs=26.8
Q ss_pred ccCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-HHHHhcCCHHHHhhhC
Q psy15116 9 QWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARA 55 (78)
Q Consensus 9 ~Ws~~~V~~Wl~W~~~ef~L~~~--~~~~f~m~-G~~LC~lt~edF~~~~ 55 (78)
.-+...|.+||. ..+|... .+..-.++ +..|..||.+|+...-
T Consensus 20 ~~~~~~V~~WL~----~lgL~qY~~~F~~~g~~s~e~l~~lt~~DL~~lG 65 (82)
T 3hil_A 20 GIPYRTVSEWLE----SIRMKRYILHFHSAGLDTMECVLELTAEDLTQMG 65 (82)
T ss_dssp CCCCSSHHHHHH----HTTCGGGHHHHHHTTCCSGGGGTTCCHHHHHHTT
T ss_pred CcchhHHHHHHH----hCCHHHHHHHHHHcCCChHHHHhcCCHHHHHHCC
Confidence 345568999995 3334332 12222455 7779999999987653
No 88
>2l3g_A RHO guanine nucleotide exchange factor 7; structural genomics, northeast structural genomics consortiu PSI-biology, calponin-homology domain; NMR {Homo sapiens}
Probab=21.78 E-value=13 Score=22.92 Aligned_cols=12 Identities=25% Similarity=0.435 Sum_probs=7.8
Q ss_pred CHHHHHHHHHHH
Q psy15116 11 SESNVAQWLCWA 22 (78)
Q Consensus 11 s~~~V~~Wl~W~ 22 (78)
-.+++.+|+.-+
T Consensus 13 ~~~e~~~WI~~~ 24 (126)
T 2l3g_A 13 SAEQTVTWLITL 24 (126)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 356777777643
No 89
>1wym_A Transgelin-2; CH domain, F-actin binding, all helix, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens}
Probab=21.19 E-value=8.6 Score=24.47 Aligned_cols=34 Identities=21% Similarity=0.454 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC--CCC---CCCHHHHhcC
Q psy15116 12 ESNVAQWLCWAIREFSLEGVTL--HQF---YMRGKDICSM 46 (78)
Q Consensus 12 ~~~V~~Wl~W~~~ef~L~~~~~--~~f---~m~G~~LC~l 46 (78)
++++++||.-+..+ +++..+. ..| -.||.-||.|
T Consensus 19 e~e~~~WIe~~l~~-~l~~~~~~~~~~~~~LkDGvvLCkL 57 (155)
T 1wym_A 19 EQILIQWITTQCRK-DVGRPQPGRENFQNWLKDGTVLCEL 57 (155)
T ss_dssp HHHHHHHHHHHSSS-CCCCCCSSHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCCCcccHHHHHHHHcchHHHHHH
Confidence 46888888865433 2332111 122 3577777776
Done!