RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15116
         (78 letters)



>d2jv3a_ a.60.1.1 (A:) Ets-1 transcription factor pointed domain
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 110

 Score = 98.4 bits (245), Expect = 3e-29
 Identities = 42/70 (60%), Positives = 54/70 (77%)

Query: 6   DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           DPRQW+E++V  W+ WA+ EFSL+GV   +F M G  +C++GKE FL  AP F+GDILWE
Sbjct: 40  DPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDILWE 99

Query: 66  HLEILQKEYL 75
           HLEILQKE +
Sbjct: 100 HLEILQKEDV 109


>d1ji7a_ a.60.1.1 (A:) Etv6 transcription factor pointed domain
          (Tel SAM) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 77

 Score = 96.0 bits (239), Expect = 7e-29
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
           P  WS  +VAQWL WA  EFSL  +  + F M GK +  + KE F  R+ P  GD L+E
Sbjct: 11 QPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRS-PHSGDELYE 69

Query: 66 HLEILQKE 73
           L+ + K+
Sbjct: 70 LLQHILKQ 77


>d1sv0a_ a.60.1.1 (A:) Ets DNA-binding protein pokkuri (Yan)
          {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
          Length = 77

 Score = 95.2 bits (237), Expect = 1e-28
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DPR WS  +V  +L + +REF L  +    F M GK +C + +  F  R P   GD+L  
Sbjct: 8  DPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCPG-AGDVLHN 66

Query: 66 HLEILQKE 73
           L++L  E
Sbjct: 67 VLQMLIIE 74


>d1sxda_ a.60.1.1 (A:) GABP-alpha subunit {Mouse (Mus musculus)
          [TaxId: 10090]}
          Length = 91

 Score = 92.9 bits (231), Expect = 2e-27
 Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWE 65
          DP  WS   V  W+ W ++EFS+  + L    + G+++CS+ +E F  R P   G+ILW 
Sbjct: 22 DPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWS 79

Query: 66 HLEILQKEYLV 76
          HLE+L+K  L 
Sbjct: 80 HLELLRKYVLA 90


>d1sxea_ a.60.1.1 (A:) Transcriptional regulator ERG {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 97

 Score = 91.8 bits (228), Expect = 5e-27
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 6  DPRQWSESNVAQWLCWAIREFSLEGVTLHQFY-MRGKDICSMGKESFLARAPPFMGDILW 64
          DP  WS  +V QWL WA++E+ L  V +  F  + GK++C M K+ F    P +  DIL 
Sbjct: 26 DPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILL 85

Query: 65 EHLEILQKEYL 75
           HL  L++  L
Sbjct: 86 SHLHYLRETPL 96


>d1sv0c_ a.60.1.1 (C:) Modulator of the activity of Ets (MAE,
          CG15085-PA) {Fruit fly (Drosophila melanogaster)
          [TaxId: 7227]}
          Length = 82

 Score = 84.5 bits (209), Expect = 3e-24
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 6  DPRQWSESNVAQWL--CWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDIL 63
          DPR W+ ++V +WL          +      +F M GK +C M  + +L R  P  G +L
Sbjct: 10 DPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRV-PVGGKML 68

Query: 64 WEHLEILQKEYL 75
          +    +     +
Sbjct: 69 YRDFRVRLARAM 80


>d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse
          (Mus musculus) [TaxId: 10090]}
          Length = 85

 Score = 24.2 bits (52), Expect = 1.3
 Identities = 7/20 (35%), Positives = 9/20 (45%)

Query: 3  TLDDPRQWSESNVAQWLCWA 22
          T+ +   WS   VA WL   
Sbjct: 7  TMKEVVYWSPKKVADWLLEN 26


>d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor
          of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 78

 Score = 23.1 bits (49), Expect = 2.9
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 4  LDDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD-- 61
          ++    W+   VA WL     + SL+      + + GK++  +  +S  A A   +G   
Sbjct: 1  MEPVETWTPGKVATWLRG--LDDSLQDYPFEDWQLPGKNLLQLCPQSLEALAVRSLGHQE 58

Query: 62 ILWEHLEILQKE 73
          ++   +E LQ  
Sbjct: 59 LILGGVEQLQAL 70


>d1pg6a_ b.82.5.2 (A:) Hypothetical protein SPyM3_0169 (SPyM18_0222,
           SPS0176) {Streptococcus pyogenes [TaxId: 1314]}
          Length = 227

 Score = 22.6 bits (48), Expect = 7.2
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 44  CSMGKESFLARAPPFMGDILWEHLEILQKEYLV 76
                +  LA AP   G I+   LE+ +K+Y +
Sbjct: 74  AMSNGDGKLALAPNTPGQIV--ALELGEKQYRL 104


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.140    0.473 

Gapped
Lambda     K      H
   0.267   0.0632    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 326,889
Number of extensions: 12508
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 14
Length of query: 78
Length of database: 2,407,596
Length adjustment: 45
Effective length of query: 33
Effective length of database: 1,789,746
Effective search space: 59061618
Effective search space used: 59061618
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.1 bits)