Query psy15117
Match_columns 114
No_of_seqs 102 out of 255
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 21:01:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15117.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15117hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jv3_A ETS1 proto-oncogene; ET 100.0 3.5E-41 1.2E-45 236.9 8.3 93 1-93 17-109 (110)
2 1sxd_A GA repeat binding prote 100.0 2.9E-38 9.8E-43 215.6 9.5 85 6-92 4-88 (91)
3 1sxe_A Transcriptional regulat 100.0 5.5E-36 1.9E-40 206.4 4.1 83 10-92 12-95 (97)
4 1x66_A Friend leukemia integra 100.0 2.2E-35 7.4E-40 203.6 2.6 83 11-93 10-93 (98)
5 2dkx_A SAM pointed domain-cont 100.0 1.7E-34 5.9E-39 198.5 5.7 84 9-93 8-91 (96)
6 1sv0_A ETS DNA-binding protein 100.0 6.7E-34 2.3E-38 191.9 7.8 77 17-94 2-78 (85)
7 2ytu_A Friend leukemia integra 100.0 5.5E-34 1.9E-38 205.0 2.2 83 10-92 23-106 (128)
8 2e8p_A ELF3 protein; cell-free 100.0 2.7E-30 9.2E-35 176.7 7.5 73 18-91 17-91 (92)
9 1ji7_A ETS-related protein TEL 100.0 1.3E-29 4.4E-34 172.1 8.4 75 19-94 6-80 (89)
10 2qar_B Telsam domain; polymer, 100.0 2.9E-29 1E-33 171.5 7.7 75 20-95 7-81 (93)
11 1sv0_C Modulator of the activi 100.0 1.5E-29 5.2E-34 168.9 5.8 72 18-90 4-77 (82)
12 2qb0_B Telsam domain - lysozym 99.9 1.8E-28 6.1E-33 190.1 7.5 76 16-92 3-78 (241)
13 1pk1_B Sex COMB on midleg CG94 98.5 3.8E-08 1.3E-12 66.0 2.9 79 16-94 5-85 (89)
14 2d8c_A Phosphatidylcholine:cer 98.2 4.9E-06 1.7E-10 56.5 6.4 72 21-97 13-89 (97)
15 1wwu_A Hypothetical protein FL 97.8 5.9E-05 2E-09 51.8 6.0 65 21-91 18-83 (99)
16 3bs7_A Protein aveugle; sterIl 97.7 2.8E-05 9.6E-10 49.7 3.7 68 24-91 2-71 (78)
17 1v85_A Similar to ring finger 97.7 6.4E-05 2.2E-09 49.8 4.9 72 20-93 12-89 (91)
18 2e8m_A Epidermal growth factor 97.7 3.6E-05 1.2E-09 52.9 3.7 64 21-91 28-92 (99)
19 2e8o_A SAM domain and HD domai 97.5 6.2E-05 2.1E-09 50.9 3.0 69 20-92 22-96 (103)
20 3bs5_A Protein aveugle; sterIl 97.4 0.00013 4.5E-09 49.8 3.9 76 16-91 14-91 (106)
21 3bq7_A Diacylglycerol kinase d 97.3 0.00013 4.4E-09 47.2 3.1 67 22-92 4-74 (81)
22 1wwv_A Connector enhancer of k 97.3 0.00032 1.1E-08 46.8 4.5 66 22-92 8-78 (91)
23 1kw4_A Polyhomeotic; SAM domai 97.1 0.00012 4.2E-09 48.6 1.4 67 23-92 12-82 (89)
24 3bs5_B Connector enhancer of k 96.9 0.00033 1.1E-08 44.8 1.8 67 24-92 3-73 (80)
25 2ean_A Connector enhancer of k 96.8 0.00041 1.4E-08 44.7 1.7 68 23-92 6-77 (83)
26 2gle_A Neurabin-1; SAM domain, 96.4 0.00052 1.8E-08 43.2 0.1 64 24-91 3-70 (74)
27 1uqv_A STE50 protein; SAM, ste 96.1 0.006 2.1E-07 40.7 3.8 67 22-91 6-79 (85)
28 2f3n_A SH3 and multiple ankyri 96.0 0.002 6.9E-08 41.0 1.4 61 26-90 3-67 (76)
29 2eap_A Lymphocyte cytosolic pr 95.7 0.00065 2.2E-08 45.8 -2.2 63 23-90 17-81 (90)
30 2dkz_A Hypothetical protein LO 93.6 0.084 2.9E-06 35.0 4.0 52 19-74 9-63 (84)
31 2k60_A Protein (stromal intera 84.0 0.17 5.9E-06 36.6 -0.4 41 25-68 78-120 (150)
32 2l5y_A Stromal interaction mol 82.3 0.2 6.9E-06 36.3 -0.6 43 23-68 76-120 (150)
33 3tad_C Liprin-beta-1; protein 82.0 1.2 4E-05 34.8 3.6 63 25-91 15-82 (265)
34 2eao_A Ephrin type-B receptor 69.2 8.1 0.00028 25.1 4.6 73 24-100 16-95 (99)
35 2kso_A Ephrin type-A receptor 62.1 3 0.0001 26.5 1.3 62 25-90 11-77 (82)
36 3h8m_A Ephrin type-A receptor 60.4 7.2 0.00025 25.2 3.0 65 22-90 17-86 (90)
37 2d89_A EHBP1 protein; all alph 58.0 6 0.0002 26.7 2.3 34 30-65 11-47 (119)
38 3tad_C Liprin-beta-1; protein 52.7 4.7 0.00016 31.4 1.2 61 21-85 171-237 (265)
39 3tac_B Liprin-alpha-2; transfe 52.7 10 0.00034 30.7 3.1 20 20-39 241-260 (334)
40 2qkq_A Ephrin type-B receptor 51.2 7.4 0.00025 24.4 1.8 46 29-78 14-62 (83)
41 1wyl_A NEDD9 interacting prote 49.3 19 0.00065 24.0 3.7 36 30-65 9-45 (116)
42 3tac_B Liprin-alpha-2; transfe 49.3 16 0.00056 29.4 3.9 52 18-74 31-85 (334)
43 2ke7_A Ankyrin repeat and ster 41.7 5.6 0.00019 26.1 0.1 64 22-89 14-84 (103)
44 2d87_A Smoothelin splice isofo 41.7 16 0.00054 25.0 2.4 34 30-65 9-45 (128)
45 1wyq_A Spectrin beta chain, br 41.4 23 0.00078 24.1 3.2 34 30-65 9-45 (127)
46 1bhd_A Utrophin; calponin homo 40.2 23 0.00078 23.7 3.0 32 32-65 12-46 (118)
47 1bkr_A Spectrin beta chain; fi 37.6 21 0.00073 23.5 2.5 34 31-66 6-42 (109)
48 2k4p_A Phosphatidylinositol-3, 36.7 10 0.00035 24.4 0.7 56 19-78 15-73 (86)
49 1b4f_A EPHB2; SAM domain, EPH 34.3 17 0.0006 22.5 1.5 59 29-91 10-73 (82)
50 2e8n_A Ephrin type-A receptor 33.6 15 0.0005 23.3 1.1 63 25-91 7-74 (88)
51 1p2x_A RNG2 protein, RAS GTPas 33.4 13 0.00044 26.3 0.9 34 30-64 13-47 (159)
52 1b0x_A Protein (EPHA4 receptor 31.3 32 0.0011 22.0 2.4 65 22-90 18-87 (94)
53 2a1j_A DNA repair endonuclease 31.0 28 0.00096 20.7 2.0 30 57-86 26-56 (63)
54 1wj6_A KIAA0049 protein, RSGI 29.7 40 0.0014 22.7 2.8 48 24-74 32-79 (101)
55 1ujo_A Transgelin; CH domain, 29.2 20 0.00067 24.9 1.2 34 30-64 11-49 (144)
56 1z00_B DNA repair endonuclease 23.5 36 0.0012 21.7 1.6 29 58-86 41-70 (84)
57 2jpf_A Hypothetical protein; a 22.3 34 0.0012 23.2 1.3 29 64-94 67-95 (127)
58 3i6x_A P195, RAS GTPase-activa 21.5 19 0.00066 26.3 -0.1 33 31-64 50-83 (193)
59 2bkf_A Zinc-finger protein NBR 20.2 38 0.0013 22.2 1.2 47 24-73 24-70 (87)
No 1
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=100.00 E-value=3.5e-41 Score=236.94 Aligned_cols=93 Identities=58% Similarity=1.110 Sum_probs=90.4
Q ss_pred ChHHHHHHHHhHHHHHHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChHH
Q psy15117 1 MTEALKASFASWEKEQIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDI 80 (114)
Q Consensus 1 ~~~~~~~~~~~~~~e~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gdi 80 (114)
||+||+++|++|++|+++++||.||..||++||.+||+|+++||+|+++++++|+|||++||.||+|||++++|+++|||
T Consensus 17 ~~~~l~~~~~~~~~e~~rl~ip~DP~~WS~~~V~~WL~W~~~ef~L~~v~~~~F~m~G~~LC~ls~edF~~~~p~~~Gdi 96 (110)
T 2jv3_A 17 MSQALKATFSGFTKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMSGAALCALGKECFLELAPDFVGDI 96 (110)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCSSSTTCCHHHHHHHHHHHHHHHTCCCCCTTTTCCCHHHHHHTHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCChHhCCHHHHHHHHHHHHHhcCCCCCChhcCCCCHHHHHhCCHHHHHHHcCCCcHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999768999
Q ss_pred HHHHHHHHHHccc
Q psy15117 81 LWEHLEILQKANA 93 (114)
Q Consensus 81 L~~hL~~Lk~~~~ 93 (114)
||+||++||+.++
T Consensus 97 L~~hL~~Lk~~~~ 109 (110)
T 2jv3_A 97 LWEHLEILQKEDV 109 (110)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcc
Confidence 9999999999865
No 2
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=100.00 E-value=2.9e-38 Score=215.61 Aligned_cols=85 Identities=40% Similarity=0.893 Sum_probs=82.2
Q ss_pred HHHHHhHHHHHHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHH
Q psy15117 6 KASFASWEKEQIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHL 85 (114)
Q Consensus 6 ~~~~~~~~~e~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL 85 (114)
-++|++|+||+++++||.||..||++||.+||.|++++|+|+++++++|+|||++||.||+|||++++|. |||||+||
T Consensus 4 ~~~~~~~~ke~~rl~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~~~~f~m~G~~LC~ls~edF~~~~p~--GdiL~~hL 81 (91)
T 1sxd_A 4 MAALEGYRKEQERLGIPYDPIHWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWSHL 81 (91)
T ss_dssp HHHHHHHHHHHTTTTCCSSGGGCCHHHHHHHHHHHHHHTTCCCSCSGGGCSCHHHHHHSCHHHHHHHCTT--CHHHHHHH
T ss_pred HHHHHHHHHHhHHhCCCCChhhCCHHHHHHHHHHHHHccCCCCCChhhCCCCHHHHHcCCHHHHHHHCCC--chHHHHHH
Confidence 3799999999999999999999999999999999999999999999999999999999999999999994 99999999
Q ss_pred HHHHHcc
Q psy15117 86 EILQKAN 92 (114)
Q Consensus 86 ~~Lk~~~ 92 (114)
++||++.
T Consensus 82 ~~L~k~~ 88 (91)
T 1sxd_A 82 ELLRKYV 88 (91)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999875
No 3
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1
Probab=100.00 E-value=5.5e-36 Score=206.37 Aligned_cols=83 Identities=34% Similarity=0.722 Sum_probs=79.4
Q ss_pred HhHHHHHHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCC-CCChHHhhcCChHHHhhhCCCCChHHHHHHHHHH
Q psy15117 10 ASWEKEQIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEIL 88 (114)
Q Consensus 10 ~~~~~e~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F-~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~L 88 (114)
.+|++|+++++||.||..||++||.+||+|+++||+|+++++++| +|||++||.||++||++++|+++|||||+||++|
T Consensus 12 p~~~~e~~rl~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~F~~m~G~~LC~lt~edF~~~~p~~~GdiL~~hL~~L 91 (97)
T 1sxe_A 12 PNMTTNERRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYL 91 (97)
T ss_dssp CCCSTTTTSSSSCSSTTSCCHHHHHHHHHHHHHHHTCSSCCGGGSTTCCHHHHTTCCHHHHTTTSCHHHHHHHHHHHHHH
T ss_pred CchHhhhhhhcCCcchhccCHHHHHHHHHHHHHhcCCCCCCHHhcCCCCHHHHHhCCHHHHHHHcCCCchHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999 8999999999999999999877899999999999
Q ss_pred HHcc
Q psy15117 89 QKAN 92 (114)
Q Consensus 89 k~~~ 92 (114)
|+++
T Consensus 92 k~~~ 95 (97)
T 1sxe_A 92 RETP 95 (97)
T ss_dssp TTSC
T ss_pred HhCc
Confidence 9874
No 4
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=203.63 Aligned_cols=83 Identities=34% Similarity=0.708 Sum_probs=79.1
Q ss_pred hHHHHHHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCC-CCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHH
Q psy15117 11 SWEKEQIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQ 89 (114)
Q Consensus 11 ~~~~e~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F-~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk 89 (114)
.|.+|+++++||.||..||++||++||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++||
T Consensus 10 ~~~~e~~rl~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~v~~~~F~~m~G~~LC~ls~edF~~~~~~~~GdiL~~hL~~Lk 89 (98)
T 1x66_A 10 NMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLR 89 (98)
T ss_dssp CCCCSSSCCCCCSSGGGCCTTHHHHHHHHHHHHTTCCSCCGGGGTTCCHHHHHHCCHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred CccccceecCCCCChhhcCHHHHHHHHHHHHHhcCCCCCChhhCCCCCHHHHHcCCHHHHHHHcCCCchHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999999999 89999999999999999998778999999999999
Q ss_pred Hccc
Q psy15117 90 KANA 93 (114)
Q Consensus 90 ~~~~ 93 (114)
++..
T Consensus 90 ~~~s 93 (98)
T 1x66_A 90 ESSS 93 (98)
T ss_dssp TCSS
T ss_pred hcCC
Confidence 8754
No 5
>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=198.50 Aligned_cols=84 Identities=36% Similarity=0.671 Sum_probs=79.4
Q ss_pred HHhHHHHHHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHH
Q psy15117 9 FASWEKEQIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEIL 88 (114)
Q Consensus 9 ~~~~~~e~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~L 88 (114)
..++.++|++++||.||..||++||.+||+|+++||+|+++++.+|+|||++||.||+|||++++| .+|||||+||++|
T Consensus 8 ~~d~~~~~~~l~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~f~m~G~~LC~lskedF~~~~p-~~GdiL~~hL~~L 86 (96)
T 2dkx_A 8 LKDIETACKLLNITADPMDWSPSNVQKWLLWTEHQYRLPPMGKAFQELAGKELCAMSEEQFRQRSP-LGGDVLHAHLDIW 86 (96)
T ss_dssp THHHHHHHHTTTCCSCGGGCCSSTHHHHHHHHHHHTTCCCCHHHHSSCCHHHHHHSCHHHHHHHCS-SSTHHHHHHHHHH
T ss_pred CCchhhhhhhcCCCCChhhCCHHHHHHHHHHHHHhcCCCCCCcccCCCCHHHHHhCCHHHHHHHcC-cchHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999999 5899999999999
Q ss_pred HHccc
Q psy15117 89 QKANA 93 (114)
Q Consensus 89 k~~~~ 93 (114)
|++..
T Consensus 87 k~~~s 91 (96)
T 2dkx_A 87 KSAAS 91 (96)
T ss_dssp HHHHS
T ss_pred HhccC
Confidence 98654
No 6
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=100.00 E-value=6.7e-34 Score=191.88 Aligned_cols=77 Identities=31% Similarity=0.624 Sum_probs=72.9
Q ss_pred HhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHHcccc
Q psy15117 17 IRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKANAK 94 (114)
Q Consensus 17 ~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~~~~~ 94 (114)
..++||.||..||++||.+||+|+++||+|+++++++|+|||++||.||+|||++++|. +|||||+||++||+++.+
T Consensus 2 l~~~ip~DP~~Ws~~~V~~WL~W~~~ef~L~~i~~~~F~m~G~~LC~ls~edF~~~~p~-~GdiL~~hL~~Lk~~~~~ 78 (85)
T 1sv0_A 2 LPPSLPSDPRLWSREDVLVFLRFCVREFDLPKLDFDLFQMNGKRLCLLTRADFGHRCPG-AGDVLHNVLQMLIIESHS 78 (85)
T ss_dssp CCTTSCSSGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHSTT-THHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHccCCCCCChhhCCCCHHHHHcCCHHHHHHHcCC-chHHHHHHHHHHHHhhhh
Confidence 35789999999999999999999999999999999999999999999999999999995 999999999999997543
No 7
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.98 E-value=5.5e-34 Score=204.99 Aligned_cols=83 Identities=34% Similarity=0.705 Sum_probs=79.3
Q ss_pred HhHHHHHHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCC-CCChHHhhcCChHHHhhhCCCCChHHHHHHHHHH
Q psy15117 10 ASWEKEQIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEIL 88 (114)
Q Consensus 10 ~~~~~e~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F-~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~L 88 (114)
++|++++++++||.||..||++||++||+|+++||+|+++++++| +|||++||.||+|||++++|+++|||||+||++|
T Consensus 23 p~~~~e~~rl~IP~DP~~WS~~~V~~WL~Wa~~ef~L~~id~~~Fq~mnGk~LC~LskeDF~~~~p~~~GDiL~~hL~~L 102 (128)
T 2ytu_A 23 PNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYL 102 (128)
T ss_dssp CSCCCCSSCCSCCSCGGGCCTTHHHHHHHHHHHHTCCCSCCCGGGSSCCTTHHHHCCHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred CchhhhhhhccCCcchhhCCHHHHHHHHHHHHHhcCCCCCChHhCCCCCHHHHHcCCHHHHHHHcCCCchHHHHHHHHHH
Confidence 467889999999999999999999999999999999999999999 8999999999999999999877899999999999
Q ss_pred HHcc
Q psy15117 89 QKAN 92 (114)
Q Consensus 89 k~~~ 92 (114)
|++.
T Consensus 103 r~~~ 106 (128)
T 2ytu_A 103 RESS 106 (128)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9983
No 8
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.96 E-value=2.7e-30 Score=176.71 Aligned_cols=73 Identities=21% Similarity=0.459 Sum_probs=67.4
Q ss_pred hcCCCCCcCCCCHHHHHHHHHHHHHhcCC--CCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHHc
Q psy15117 18 RLNIVKDPRQWSESNVAQWLCWAIREFSL--EGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKA 91 (114)
Q Consensus 18 ~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L--~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~~ 91 (114)
+.-.|.||..||++||.+||+|++++|++ .+|++++|+|||++||.||+|||++++|+ +|||||+||++||++
T Consensus 17 ~~w~~~dP~~Ws~~~V~~WL~Wavke~~~dl~~i~~~~f~m~G~~LC~mskedF~~~~p~-~GdiL~~hL~~L~~~ 91 (92)
T 2e8p_A 17 ASWLGEQPQFWSKTQVLDWISYQVEKNKYDASAIDFSRCDMDGATLCNCALEELRLVFGP-LGDQLHAQLRDLTSS 91 (92)
T ss_dssp CTTSSSCGGGCCHHHHHHHHHHHHHHTTCCCSSCCTTTCCCCSHHHHHSCHHHHHHHSGG-GHHHHHHHHHHHHHC
T ss_pred ccccCCChhhcCHHHHHHHHHHHHHHhCCCCCCCChhhcCCCHHHHHcCCHHHHHHHcCC-cHHHHHHHHHHHHhc
Confidence 34569999999999999999999997555 68999999999999999999999999997 999999999999985
No 9
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=99.96 E-value=1.3e-29 Score=172.10 Aligned_cols=75 Identities=39% Similarity=0.646 Sum_probs=69.4
Q ss_pred cCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHHcccc
Q psy15117 19 LNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKANAK 94 (114)
Q Consensus 19 l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~~~~~ 94 (114)
..||.||..||++||.+||.|+.+||+|+++++++|+|||++||.||++||+.++|. +|||||+||++|++++..
T Consensus 6 ~~l~~DP~~WS~~~V~~WL~w~~~ef~L~~~~~~~f~mdGk~Lc~Ls~edF~~~~p~-~GdiL~~hL~~l~~~~~~ 80 (89)
T 1ji7_A 6 AHLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSPH-SGDELYELLQHILKQRDH 80 (89)
T ss_dssp GGGCSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCTT-THHHHHHHHHHHHHC---
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHhcCCCCCchhcCCCCHHHHHcCCHHHHHhHcCC-chHHHHHHHHHHHhCccc
Confidence 358999999999999999999999999999999999999999999999999999996 699999999999998654
No 10
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=99.96 E-value=2.9e-29 Score=171.45 Aligned_cols=75 Identities=39% Similarity=0.661 Sum_probs=70.7
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHHccccc
Q psy15117 20 NIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKANAKG 95 (114)
Q Consensus 20 ~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~~~~~~ 95 (114)
.+|.||..||++||.+||+|+.++|+|+++++++|+|||++||.||++||+.++|. +|||||+||++||+.++..
T Consensus 7 ~l~~DP~~WS~~~V~~WL~w~~~ef~L~~i~~~~f~mdGk~Lc~Lt~edF~~~~p~-~GdiL~~hL~~Lk~~~~~~ 81 (93)
T 2qar_B 7 HLRLQPIYWSRDDVAQWLKWAENEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPH-SGDVLYELLQHILKQRDLE 81 (93)
T ss_dssp GGCSCGGGCCHHHHHHHHHHHHHHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHCTT-THHHHHHHHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHHHhcCCCCcchhcCCCCHHHHHcCCHHHHhhhCCc-chHHHHHHHHHHHHhcHHH
Confidence 47889999999999999999999999999999999999999999999999999995 8999999999999987553
No 11
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=99.96 E-value=1.5e-29 Score=168.93 Aligned_cols=72 Identities=26% Similarity=0.531 Sum_probs=67.0
Q ss_pred hcCCCCCcCCCCHHHHHHHHHHHHHhcCC--CCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHH
Q psy15117 18 RLNIVKDPRQWSESNVAQWLCWAIREFSL--EGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQK 90 (114)
Q Consensus 18 ~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L--~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~ 90 (114)
+++||.||..||++||.+||.|+.++|++ +++++++|+|||++||.||++||++++| .+|||||+||+.+-+
T Consensus 4 ~l~i~~dP~~Ws~~~V~~WL~w~~~e~~l~l~~~~~~~f~m~G~~Lc~ls~edF~~~~p-~~GdiL~~hL~~~l~ 77 (82)
T 1sv0_C 4 SDGLPLDPRDWTRADVWKWLINMAVSEGLEVTAELPQKFPMNGKALCLMSLDMYLCRVP-VGGKMLYRDFRVRLA 77 (82)
T ss_dssp TTSSBSSGGGCCHHHHHHHHHHHHHHHTCCCCTHHHHTCCSCHHHHHHCCHHHHHHHCT-TTHHHHHHHHHHHHH
T ss_pred hccCCCChhhCCHHHHHHHHHHHHHHhCCCCCCCccccCCCCHHHHHhCCHHHHHhhCC-CchHHHHHHHHHHHH
Confidence 67999999999999999999999999877 7788899999999999999999999999 699999999995544
No 12
>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli}
Probab=99.95 E-value=1.8e-28 Score=190.10 Aligned_cols=76 Identities=38% Similarity=0.678 Sum_probs=71.9
Q ss_pred HHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHHcc
Q psy15117 16 QIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKAN 92 (114)
Q Consensus 16 ~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~~~ 92 (114)
+.++.||.||+.||++||.+||+|+++||+|+++++++|+|||++||.||++||+.++| ++|||||+||++|++.+
T Consensus 3 ~~~~~~p~dP~~Wt~~~V~~Wl~w~~~~f~l~~~~~~~f~~~G~~Lc~m~~~~F~~~~p-~~G~iL~~hl~~l~k~~ 78 (241)
T 2qb0_B 3 RLPAHLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLTKEDFRYRSP-HSGDVLYELLQHILKQA 78 (241)
T ss_dssp CCCGGGGSCGGGCCHHHHHHHHHHHHHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHHCT-TTHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCChhhCCHHHHHHHHHHHHHhcCCCCCCHHhcCCChHHHHHcCHHHHHhhcC-CcchhhHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999 59999999999877765
No 13
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=98.53 E-value=3.8e-08 Score=66.03 Aligned_cols=79 Identities=11% Similarity=0.246 Sum_probs=51.3
Q ss_pred HHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHHccc
Q psy15117 16 QIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKANA 93 (114)
Q Consensus 16 ~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~~~~ 93 (114)
...-.++.+|..||.++|.+||......|+-..-.+..-.|||++|..||++|++...+-..|. .||..+..||.+..
T Consensus 5 ~~~~~~~~~v~~WsvedV~~wl~~~~~g~~~y~~~F~~~eIDG~aLL~Lt~~dl~~~mgiklGpalKi~~~I~~lk~~~~ 84 (89)
T 1pk1_B 5 RANSHLRSQPIDWTIEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLRLNSERMMKYMGLKLGPALKICNLVNKVNGRDH 84 (89)
T ss_dssp ------CCCGGGCCHHHHHHHHHHHCGGGGGGHHHHHHTTCCHHHHHTCCHHHHHHHSCCCHHHHHHHHHHHHHHC----
T ss_pred CCCCCCCCCchhCCHHHHHHHHHHHccchHHHHHHHHHcCcChHHHhcCCHHHHHHccCCCccHHHHHHHHHHHHHcccc
Confidence 3445578999999999999999877433332222234557999999999999998765544564 57888888876654
Q ss_pred c
Q psy15117 94 K 94 (114)
Q Consensus 94 ~ 94 (114)
+
T Consensus 85 ~ 85 (89)
T 1pk1_B 85 H 85 (89)
T ss_dssp -
T ss_pred c
Confidence 3
No 14
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=98.16 E-value=4.9e-06 Score=56.48 Aligned_cols=72 Identities=24% Similarity=0.355 Sum_probs=51.8
Q ss_pred CCCCcCCCCHHHHHHHHHHHH-HhcCCCCCCCCCCCCChHHhhcCChHHHhh--hCCCCCh--HHHHHHHHHHHHccccc
Q psy15117 21 IVKDPRQWSESNVAQWLCWAI-REFSLEGVTLHQFYMRGKDICSMGKESFLA--RAPPFMG--DILWEHLEILQKANAKG 95 (114)
Q Consensus 21 iP~DP~~WS~~~V~~Wl~W~~-~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~--~~p~~~G--diL~~hL~~Lk~~~~~~ 95 (114)
.+.++..||.++|.+||.-.- .+|. +. +. +|||+.|..||.+|+.. .--...| -.|+..++.||+.....
T Consensus 13 ~~~~v~~Ws~edV~~WL~~~Gl~~Y~-~~--F~--~IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~~I~~L~~~~~~~ 87 (97)
T 2d8c_A 13 TMKEVVYWSPKKVADWLLENAMPEYC-EP--LE--HFTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEHHME 87 (97)
T ss_dssp CCSCCSSCCTTHHHHHHHHTTCTTTT-TT--TT--TCCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHHHHHHSCCC
T ss_pred CCCchhhCCHHHHHHHHHHcCCHHHH-HH--HH--cCCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Confidence 467889999999999997321 2222 22 22 49999999999999987 3322334 67999999999876554
Q ss_pred cc
Q psy15117 96 VA 97 (114)
Q Consensus 96 ~~ 97 (114)
..
T Consensus 88 ~~ 89 (97)
T 2d8c_A 88 AH 89 (97)
T ss_dssp CC
T ss_pred HH
Confidence 33
No 15
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=97.75 E-value=5.9e-05 Score=51.78 Aligned_cols=65 Identities=17% Similarity=0.259 Sum_probs=52.1
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCC-CCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHHc
Q psy15117 21 IVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKA 91 (114)
Q Consensus 21 iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F-~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~~ 91 (114)
++.+|.. ++++|.+||+ .+.|+=. -...| ..+|.+|..|+++|+...|| .-|--||..|..-|..
T Consensus 18 ~~L~~~S-sp~EV~~WL~--~kgFS~~--tv~~Lg~ltGaqLf~Ltk~eL~~vCg-~EG~RlysqL~~qk~~ 83 (99)
T 1wwu_A 18 QPLTYES-GPDEVRAWLE--AKAFSPR--IVENLGILTGPQLFSLNKEELKKVCG-EEGVRVYSQLTMQKAF 83 (99)
T ss_dssp CCCCTTC-CHHHHHHHHH--HHTCCTT--HHHHTTSSCHHHHHTCCHHHHHHHHT-TTHHHHHHHHHHHHHH
T ss_pred cccCCCC-CHHHHHHHHH--HcCCCHH--HHHHHcCCCHHHHHcCCHHHHHHHCc-chhHHHHHHHHHHHHH
Confidence 3445555 8999999997 5666543 23455 78999999999999999999 4899999999998875
No 16
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=97.72 E-value=2.8e-05 Score=49.65 Aligned_cols=68 Identities=15% Similarity=0.252 Sum_probs=47.5
Q ss_pred CcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHHc
Q psy15117 24 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKA 91 (114)
Q Consensus 24 DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~~ 91 (114)
....||.++|.+||......+.--.-.+..-.++|..|+.|+.+|+...--...|+ .++..++.||..
T Consensus 2 ~v~~Wt~~~V~~WL~~~~~gl~~y~~~F~~~~I~G~~Ll~L~~~dL~~lGI~~~g~r~~il~~I~~Lr~~ 71 (78)
T 3bs7_A 2 AVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQRLK 71 (78)
T ss_dssp CGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhcCHHHHHHHHHHCCCCHHHHhhCCHHHHhHcCCCCHHHHHHHHHHHHHHHhH
Confidence 34689999999999875111221111233447899999999999998876544675 477888888753
No 17
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=97.66 E-value=6.4e-05 Score=49.79 Aligned_cols=72 Identities=14% Similarity=0.136 Sum_probs=49.4
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhh--hCCCCChHH--HHHHHHHHHHccc
Q psy15117 20 NIVKDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLA--RAPPFMGDI--LWEHLEILQKANA 93 (114)
Q Consensus 20 ~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~--~~p~~~Gdi--L~~hL~~Lk~~~~ 93 (114)
..+.++..||.++|.+||.-.- +..... .+..=.|+|..|+.||.+|+.. .--...|+. |+.-++.||..+.
T Consensus 12 ~~~~~v~~Wt~~dV~~WL~~~g--l~~~~Y~~~F~~~~IdG~~Ll~Lt~~dL~~~~LGI~~~g~r~~il~~I~~Lr~~~~ 89 (91)
T 1v85_A 12 LVHKAVDKWTTEEVVLWLEQLG--PWASLYRDRFLSERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILTELERVRSGPS 89 (91)
T ss_dssp HHHSCGGGCCHHHHHHHHHHHC--GGGHHHHHHHHHTTCCHHHHHHCCHHHHHSTTTCCCCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCcccCCHHHHHHHHHHcC--CCHHHHHHHHHHhCCCHHHHhcCCHHHHhccCCCCCCHHHHHHHHHHHHHHHhccC
Confidence 3567899999999999997531 100111 1222279999999999999986 443335654 7788888886554
No 18
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=3.6e-05 Score=52.87 Aligned_cols=64 Identities=20% Similarity=0.426 Sum_probs=50.5
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCC-CCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHHc
Q psy15117 21 IVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQF-YMRGKDICSMGKESFLARAPPFMGDILWEHLEILQKA 91 (114)
Q Consensus 21 iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F-~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~~ 91 (114)
++.+|.. ++++|.+||+ .+.|+- .-...| ..+|.+|..|+++|+...|| -|--||..|..-|..
T Consensus 28 ~~L~~~S-sp~EV~~WL~--~kgFS~--~tv~~Lg~ltGaqLl~Ltk~eL~~vCg--EG~RlysqL~vqk~~ 92 (99)
T 2e8m_A 28 INITYDS-TPEDVKTWLQ--SKGFNP--VTVNSLGVLNGAQLFSLNKDELRTVCP--EGARVYSQITVQKAA 92 (99)
T ss_dssp CCCCTTC-CTTHHHHHHH--HHTCCH--HHHHHTSSSCHHHHHHCCHHHHHHHCT--THHHHHHHHHHHHHH
T ss_pred eecCCCC-CHHHHHHHHH--HcCCCH--HHHHHHcCCCHHHHHcCCHHHHHHHCC--chHHHHHHHHHHHHH
Confidence 4455555 8999999997 555554 222445 68999999999999999999 599999999988765
No 19
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.48 E-value=6.2e-05 Score=50.89 Aligned_cols=69 Identities=14% Similarity=0.290 Sum_probs=50.3
Q ss_pred CCCCCcCCCCHHHHHHHHHHHHHhcCCCC--C--CCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHHcc
Q psy15117 20 NIVKDPRQWSESNVAQWLCWAIREFSLEG--V--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKAN 92 (114)
Q Consensus 20 ~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~--v--~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~~~ 92 (114)
..+.++..||.++|.+||.-. .+.. . .+..=.|+|..|+.|+.+|+...--...|+ .++..++.||...
T Consensus 22 ~~~~~v~~Ws~~~V~~WL~~l----gl~~~~y~~~F~~~~I~G~~Ll~Lt~~dLkeLGI~~~G~R~kil~~I~~Lr~~~ 96 (103)
T 2e8o_A 22 ELHPDYKTWGPEQVCSFLRRG----GFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLSYIQRLVQIH 96 (103)
T ss_dssp CCCSCGGGCHHHHHHHHHHHH----TCCCHHHHHHHHHTTCCTTTTTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHTTT
T ss_pred ccccChhhCCHHHHHHHHHHc----CCChHHHHHHHHHcCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHHHhH
Confidence 357799999999999999743 3432 1 122337999999999999988755434575 4778888887654
No 20
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=97.40 E-value=0.00013 Score=49.79 Aligned_cols=76 Identities=14% Similarity=0.233 Sum_probs=49.7
Q ss_pred HHhcCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHHc
Q psy15117 16 QIRLNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKA 91 (114)
Q Consensus 16 ~~~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~~ 91 (114)
...-..|.++..||.++|.+||.-....+.--.-.+..-.|+|..|..|+.+|+...--...|+ .++..++.||..
T Consensus 14 ~~~~~~~~~v~~Wt~~~V~~WL~~~~~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dLk~LGI~~~GhR~kIl~~I~~Lr~~ 91 (106)
T 3bs5_A 14 RTKTTRPKAVYLWTVSDVLKWYRRHCGEYTQYEQLFAQHDITGRALLRITDSSLQRMGVTDNRDREAIWREIVKQRLK 91 (106)
T ss_dssp ------CCCGGGCCHHHHHHHHHHHSGGGGGGHHHHHHTTCCHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCcccCCHHHHHHHHHHHHcchHHHHHHHHHcCccHHHHhhCCHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 3344678899999999999999865211111011123336899999999999998765444675 478888888753
No 21
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=97.34 E-value=0.00013 Score=47.19 Aligned_cols=67 Identities=16% Similarity=0.311 Sum_probs=46.6
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHHcc
Q psy15117 22 VKDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKAN 92 (114)
Q Consensus 22 P~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~~~ 92 (114)
|.++..||.++|.+||.-. .|... .+..-.++|..|+.||.+|+...--...|+ .+...++.|+...
T Consensus 4 ~~~v~~Ws~~~V~~WL~~l----gl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~ghr~kIl~aI~~L~~~~ 74 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHL----SLCEYKDIFTRHDIRGSGLLHLERRDLKDLGVTKVGHMKRILCGIKELSRSS 74 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHT----TCGGGHHHHHHTTCCHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHC--
T ss_pred CCChhhCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHCcCCHHHHhHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 6789999999999999743 34332 233447999999999999998754323564 5667777776544
No 22
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=97.27 E-value=0.00032 Score=46.85 Aligned_cols=66 Identities=21% Similarity=0.462 Sum_probs=49.7
Q ss_pred CCCcCCCCHHHHHHHHHHH---HHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHHcc
Q psy15117 22 VKDPRQWSESNVAQWLCWA---IREFSLEGVTLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKAN 92 (114)
Q Consensus 22 P~DP~~WS~~~V~~Wl~W~---~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~~~ 92 (114)
......||+++|.+||.-. ..+| .+..-.|+|++|..||.+|+.+.--...| ..++.-++.|+...
T Consensus 8 ~~~v~~Wt~~~V~~WL~~l~~~l~~Y-----~F~~~~I~G~~LL~Lt~~dL~~LGI~~~Ghr~~Il~~I~~L~~~~ 78 (91)
T 1wwv_A 8 MEPVETWTPGKVATWLRGLDDSLQDY-----PFEDWQLPGKNLLQLCPQSLEALAVRSLGHQELILGGVEQLQALS 78 (91)
T ss_dssp CCCTTTCCTTTHHHHHHHHCHHHHTS-----CHHHHCCCHHHHTTCCTTTGGGGTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCHHHHHHHHHhcCCccccc-----cHHhcCccHHHHhhCCHHHHHHcCCCcHhHHHHHHHHHHHHHHHh
Confidence 4567899999999999854 4566 24444689999999999998876433456 45788888887654
No 23
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=97.15 E-value=0.00012 Score=48.56 Aligned_cols=67 Identities=10% Similarity=0.176 Sum_probs=44.0
Q ss_pred CCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHHcc
Q psy15117 23 KDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKAN 92 (114)
Q Consensus 23 ~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~~~ 92 (114)
.++..||.++|.+||.-.. .+... .+..-.|||..|..||.+|+....+-..| -.++..++.|+...
T Consensus 12 ~~v~~Ws~edV~~wL~~l~---gl~~y~~~F~~~~IdG~~LL~Lt~~dL~k~lgIklG~r~kI~~~I~~L~~~~ 82 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIRELP---GCQDYVDDFIQQEIDGQALLRLKEKHLVNAMGMKLGPALKIVAKVESIKEVR 82 (89)
T ss_dssp CCGGGCCHHHHHHHHHTST---TCGGGHHHHHHTTCCHHHHHHCCHHHHHTTTCCCHHHHHHHHHHHHHHC---
T ss_pred CCchhCCHHHHHHHHHHCc---ChHHHHHHHHHhCccHHHHhcCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 4789999999999996320 22211 11223699999999999999544443356 45777777776543
No 24
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=96.92 E-value=0.00033 Score=44.77 Aligned_cols=67 Identities=16% Similarity=0.305 Sum_probs=45.0
Q ss_pred CcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHHcc
Q psy15117 24 DPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKAN 92 (114)
Q Consensus 24 DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~~~ 92 (114)
.+..||+++|.+||.-.. -.+... .+..-.++|..|..|+.+|+...--...|+ .++..++.|+..+
T Consensus 3 ~v~~Ws~~~V~~WL~~l~--~gl~~Y~~~F~~~~i~G~~Ll~L~~~dL~~lGI~~~ghr~~il~~I~~L~~~~ 73 (80)
T 3bs5_B 3 PVSKWSPSQVVDWMKGLD--DCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCALN 73 (80)
T ss_dssp CGGGCCHHHHHHHHHTSC--GGGGGGHHHHHHHTCCHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHh--hhHHHHHHHHHHcCCCHHHHHHCCHHHHHHcCCCCHHHHHHHHHHHHHHHHhh
Confidence 467899999999998210 001111 122236899999999999997765434564 5777888887643
No 25
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.82 E-value=0.00041 Score=44.72 Aligned_cols=68 Identities=16% Similarity=0.316 Sum_probs=46.2
Q ss_pred CCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHHcc
Q psy15117 23 KDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKAN 92 (114)
Q Consensus 23 ~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~~~ 92 (114)
..+..||+++|.+||.-.. -.|... .+..-.++|..|..|+.+|+...--...| ..++..++.|+...
T Consensus 6 ~~v~~Wt~~~V~~WL~~l~--~gl~~Y~~~F~~~~I~G~~Ll~Lt~~dL~~LGI~~~ghr~~il~~I~~L~~~~ 77 (83)
T 2ean_A 6 SGVSKWSPSQVVDWMKGLD--DCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQELILEAVDLLCALN 77 (83)
T ss_dssp CSGGGCCTTHHHHHHTTSC--GGGTTTHHHHHHHTCCHHHHTTCCHHHHHHHTCCCSHHHHHHHHHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHH--hhHHHHHHHHHHCCCCHHHHhhCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 4678999999999997110 012211 12223689999999999999887543456 45777888887643
No 26
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=96.42 E-value=0.00052 Score=43.19 Aligned_cols=64 Identities=17% Similarity=0.306 Sum_probs=43.5
Q ss_pred CcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHHc
Q psy15117 24 DPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQKA 91 (114)
Q Consensus 24 DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~~ 91 (114)
....||.++|.+||.-. .|... .+..-.+||..|+.|+.+|+...--...|+ .+...++.||..
T Consensus 3 ~v~~Ws~~~V~~WL~~~----gl~~y~~~F~~~~i~g~~Ll~l~~~dL~~lGI~~~g~r~kil~~i~~L~~~ 70 (74)
T 2gle_A 3 MVHEWSVQQVSHWLVGL----SLDQYVSEFSAQNISGEQLLQLDGNKLKALGMTSSQDRALVKKKLKEMKMS 70 (74)
T ss_dssp CGGGCCSGGGHHHHHHT----TTHHHHHHHTTTTCCHHHHHTCCHHHHHTTTCCCHHHHHHHHHHHHSHHHH
T ss_pred CcccCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHhhCCHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 46789999999999743 23221 234457899999999999976544333564 356666666643
No 27
>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A
Probab=96.07 E-value=0.006 Score=40.69 Aligned_cols=67 Identities=12% Similarity=0.156 Sum_probs=50.8
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhcCCCCCC--CCCC---CCChHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHHc
Q psy15117 22 VKDPRQWSESNVAQWLCWAIREFSLEGVT--LHQF---YMRGKDICSMGKESFLARAPPFMG--DILWEHLEILQKA 91 (114)
Q Consensus 22 P~DP~~WS~~~V~~Wl~W~~~ef~L~~v~--~~~F---~m~G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~~ 91 (114)
+.+-..||++||.+|+.... .++..| ..+| .|+|.-|-.|+.||...++....| --|-.-++.||.+
T Consensus 6 ~~~v~~Wt~~~V~~W~~~~l---g~~d~d~~~~~f~~ndItG~vL~eL~leDlKEL~i~s~~~r~~lk~~In~Lr~~ 79 (85)
T 1uqv_A 6 NEDFSQWSVDDVITWCISTL---EVEETDPLCQRLRENDIVGDLLPELCLQDCQDLCDGDLNKAIKFKILINKMRDS 79 (85)
T ss_dssp CCCTTTCCHHHHHHHHHHHH---SSCTTSTHHHHHHHSCCCGGGHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCHHHHHHHHHHHh---CCCCccHHHHHHHHcCCchhhHHHcCHHHHHHhCchHHHHHHHHHHHHHHHHHh
Confidence 66778999999999985443 444433 4566 799999999999999999987555 5566677777643
No 28
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=96.05 E-value=0.002 Score=40.95 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15117 26 RQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 90 (114)
Q Consensus 26 ~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~ 90 (114)
..||+++|.+||.-. .|+.. .+..-.++|..|+.||.+|+...--...|+ .+...++.|+.
T Consensus 3 ~~Ws~~~V~~WL~~l----gl~~Y~~~F~~~~idg~~Ll~Lt~~dL~~lGI~~~Ghr~kIl~aI~~l~~ 67 (76)
T 2f3n_A 3 QLWSKFDVGDWLESI----HLGEHRDRFEDHEIEGAHLPALTKEDFVELGVTRVGHRENIERALRQLDG 67 (76)
T ss_dssp GGCCHHHHHHHHHHT----TCGGGHHHHHHTTCCGGGGGGCCHHHHHHTTCCCHHHHHHHHHHHHTC--
T ss_pred hhCCHHHHHHHHHHC----CCHHHHHHHHHcCCCHHHHccCCHHHHHHcCCCChhHHHHHHHHHHHHHH
Confidence 479999999999732 34322 123347999999999999996655333564 34455555543
No 29
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.68 E-value=0.00065 Score=45.81 Aligned_cols=63 Identities=11% Similarity=0.268 Sum_probs=41.9
Q ss_pred CCcCCCCHHHHHHHHHHHHHhcCCCCCCC--CCCCCChHHhhcCChHHHhhhCCCCChHHHHHHHHHHHH
Q psy15117 23 KDPRQWSESNVAQWLCWAIREFSLEGVTL--HQFYMRGKDICSMGKESFLARAPPFMGDILWEHLEILQK 90 (114)
Q Consensus 23 ~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~--~~F~m~G~~LC~Lt~edF~~~~p~~~GdiL~~hL~~Lk~ 90 (114)
.+...||+++|..||. +-++...+. ....|||+.|..||..||.. .|..---+|-.--+.+-+
T Consensus 17 seV~~Wsp~~VadWLk----k~g~~~cd~lv~Kh~IDG~~lL~LtE~Dlrk-~Pkl~~p~~~k~~q~in~ 81 (90)
T 2eap_A 17 SEVLGWDPDSLADYFK----KLNYKDCEKAVKKYHIDGARFLNLTENDIQK-FPKLRVPILSKLSQEINK 81 (90)
T ss_dssp HHHTTCCTTTHHHHHH----HTTCHHHHHHHHHTTCCHHHHHTCCHHHHTT-SCTTTHHHHHHHHHHHHT
T ss_pred ccccccCHHHHHHHHH----HcCCchHHHHHHHhccCchhhhcccHHHhcc-CCccccHHHHHHHHHHhc
Confidence 4568999999999994 223322322 24569999999999999976 554334444444444443
No 30
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.57 E-value=0.084 Score=35.04 Aligned_cols=52 Identities=15% Similarity=0.138 Sum_probs=38.7
Q ss_pred cCCCCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCCC---CCChHHhhcCChHHHhhhCC
Q psy15117 19 LNIVKDPRQWSESNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSMGKESFLARAP 74 (114)
Q Consensus 19 l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F---~m~G~~LC~Lt~edF~~~~p 74 (114)
-..|.|-..||.++|..||+. ..|+.--.+.| .|+|.-|+.|++|+...-..
T Consensus 9 w~pP~dLs~lSv~EVs~~Lr~----igL~e~vv~~F~~e~IDG~lL~~L~ee~L~edf~ 63 (84)
T 2dkz_A 9 WQPPADLSGLSIEEVSKSLRF----IGLSEDVISFFVTEKIDGNLLVQLTEEILSEDFK 63 (84)
T ss_dssp CCCCSCCSSCCHHHHHHHGGG----TCCCHHHHHHHHTTTCCHHHHHHCCHHHHHHTSC
T ss_pred CCCchhhhhcCHHHHHHHHHH----cCCcHHHHHHHHHHccchHHHHhCCHHHHHhhcC
Confidence 358999999999999999974 23432112333 68899999999999876554
No 31
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=84.00 E-value=0.17 Score=36.62 Aligned_cols=41 Identities=17% Similarity=0.408 Sum_probs=31.1
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCCCCC--CCCCCCChHHhhcCChHH
Q psy15117 25 PRQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKES 68 (114)
Q Consensus 25 P~~WS~~~V~~Wl~W~~~ef~L~~v~--~~~F~m~G~~LC~Lt~ed 68 (114)
-..||.++|.+||...+ .|+..- +..-.|||++|-.|+.++
T Consensus 78 V~nWTvedV~~WL~~~v---~LpqY~~~Fr~~~I~G~~LprLa~~~ 120 (150)
T 2k60_A 78 VYNWTVDEVVQWLITYV---ELPQYEETFRKLQLSGHAMPRLAVTN 120 (150)
T ss_dssp HHHCCHHHHHHHHHHHH---CCTTHHHHHHHHCCSTTHHHHHSSCH
T ss_pred cccCCHHHHHHHHHHcC---CcHHHHHHHHHcCCCHHHHHhhcccc
Confidence 45799999999997654 365431 334589999999999886
No 32
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=82.30 E-value=0.2 Score=36.25 Aligned_cols=43 Identities=14% Similarity=0.355 Sum_probs=31.2
Q ss_pred CCcCCCCHHHHHHHHHHHHHhcCCCCCC--CCCCCCChHHhhcCChHH
Q psy15117 23 KDPRQWSESNVAQWLCWAIREFSLEGVT--LHQFYMRGKDICSMGKES 68 (114)
Q Consensus 23 ~DP~~WS~~~V~~Wl~W~~~ef~L~~v~--~~~F~m~G~~LC~Lt~ed 68 (114)
+.-..||.++|.+||...+ .|+..- +..-.|||++|-.|+..+
T Consensus 76 s~V~nWTvedV~~WL~~~v---~LpqY~~~Fr~~~IdG~~LprL~~~~ 120 (150)
T 2l5y_A 76 SEVHNWTLEDTLQWLIEFV---ELPQYEKNFRDNNVKGTTLPRIAVHE 120 (150)
T ss_dssp SHHHHCCHHHHHHHHHHHT---CCTTSHHHHHHHHCSSSTTTTCCSSS
T ss_pred CcchhCCHHHHHHHHHHcC---CcHHHHHHHHHcCCCHHHhhhhhhcc
Confidence 3346799999999998743 455432 233479999999999865
No 33
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=81.96 E-value=1.2 Score=34.83 Aligned_cols=63 Identities=16% Similarity=0.280 Sum_probs=43.6
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhhcCChHHHhhhCC-CCCh--HHHHHHHHHHHHc
Q psy15117 25 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDICSMGKESFLARAP-PFMG--DILWEHLEILQKA 91 (114)
Q Consensus 25 P~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC~Lt~edF~~~~p-~~~G--diL~~hL~~Lk~~ 91 (114)
-..|+.++|.+||. +..|+.. .+....++|..|-.||.+|...-.+ ...| ..|-..++.|+..
T Consensus 15 ~~~W~~e~V~~WLe----~~GL~~Y~~~f~~n~~dG~~Ll~lt~~dLe~eLGI~nplHRkKL~laI~el~~~ 82 (265)
T 3tad_C 15 FAKWTKEQVCSWLA----EQGLGSYLSSGKHWIISGQTLLQASQQDLEKELGIKHSLHRKKLQLALQALGSE 82 (265)
T ss_dssp GGGSCHHHHHHHHH----HTTCCTTHHHHTTTCSCSHHHHHSCHHHHHHHTCCCSHHHHHHHHHHHHHHHHC
T ss_pred hhhCChHHHHHHHH----HHCHHHHHHHHHHhCCchHHHHhCCHHHHHHHhCCCCHHHHHHHHHHHHHhccc
Confidence 56899999999997 2455432 3456789999999999999974444 2233 3455556666653
No 34
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.16 E-value=8.1 Score=25.15 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=44.2
Q ss_pred CcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-hHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHHcc--cccc
Q psy15117 24 DPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQKAN--AKGV 96 (114)
Q Consensus 24 DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~-G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~~~--~~~~ 96 (114)
.|..-+...|.+||.-. .|... .+..-.++ +..|+.|+.+|+...--...| ..+...++.|+... ...+
T Consensus 16 ~p~~~~~~~V~~WL~~l----gL~~Y~~~F~~~~~~~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~l~~~~~~~~~~ 91 (99)
T 2eao_A 16 IPDFTAFTTVDDWLSAI----KMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSMRVQISQSPTA 91 (99)
T ss_dssp CCCTTSCCBHHHHHHTT----TCGGGHHHHHHHTCCBHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHHHSSCCCCC
T ss_pred CCCCcchHHHHHHHHHC----CcHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHHHHHHhhccCCC
Confidence 34444556899999722 22221 11222567 888999999999887543346 34567777777543 2345
Q ss_pred cccc
Q psy15117 97 AVAT 100 (114)
Q Consensus 97 ~~~~ 100 (114)
.|+|
T Consensus 92 ~~~~ 95 (99)
T 2eao_A 92 MASG 95 (99)
T ss_dssp SCSC
T ss_pred CCCC
Confidence 5554
No 35
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=62.12 E-value=3 Score=26.50 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=35.4
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-hHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHH
Q psy15117 25 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQK 90 (114)
Q Consensus 25 P~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~-G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~ 90 (114)
|..|+...|.+||.-. .|... .+..-.++ +..|+.|+.+|....--...| ..+..-++.||.
T Consensus 11 ~~~~~~~~V~~WL~~l----gL~qY~~~F~~~gid~~~~L~~lt~~DL~~lGI~~~GhRkkIl~ai~~Lr~ 77 (82)
T 2kso_A 11 VPRGSHMTVSEWLESI----KMQQYTEHFMAAGYTAIEKVVQMTNDDIKRIGVRLPGHQKRIAYSLLGLKD 77 (82)
T ss_dssp -------CHHHHHHHT----TCTTHHHHHHHTTCCSHHHHTTCCHHHHHHHHCCCTTHHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHC----CCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 5668889999999732 34332 22333667 899999999999776533345 344556666654
No 36
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=60.36 E-value=7.2 Score=25.24 Aligned_cols=65 Identities=12% Similarity=0.226 Sum_probs=40.3
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-hHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHH
Q psy15117 22 VKDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQK 90 (114)
Q Consensus 22 P~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~-G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~ 90 (114)
+..|..++...|.+||. ...|... .+..-.++ +..|..|+.+|+...--...| ..+...++.||.
T Consensus 17 ~~~~~~~~~~~V~~WL~----~lgL~qY~~~F~~~g~d~~e~l~~lt~~DL~~lGIt~~GHRkkIL~ai~~Lr~ 86 (90)
T 3h8m_A 17 QGTPDFTTFCSVGEWLQ----AIKMERYKDNFTAAGYNSLESVARMTIEDVMSLGITLVGHQKKIMSSIQTMRA 86 (90)
T ss_dssp --CCCCCCCSSHHHHHH----HTTCGGGHHHHHHTTCCSHHHHHTCCHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcchhHHHHHHH----HCChHHHHHHHHHcCCChHHHHhhCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 34467888899999995 2233322 12233566 777999999998776432245 455556666653
No 37
>2d89_A EHBP1 protein; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.97 E-value=6 Score=26.70 Aligned_cols=34 Identities=18% Similarity=0.475 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCC---CChHHhhcCC
Q psy15117 30 ESNVAQWLCWAIREFSLEGVTLHQFY---MRGKDICSMG 65 (114)
Q Consensus 30 ~~~V~~Wl~W~~~ef~L~~v~~~~F~---m~G~~LC~Lt 65 (114)
++....|.+...+.| +++.+++|. -||.++|.|=
T Consensus 11 ~~~LL~W~~~~~~~y--~~v~v~nFs~sw~dG~af~aLi 47 (119)
T 2d89_A 11 SQSLLVWCKEVTKNY--RGVKITNFTTSWRNGLSFCAIL 47 (119)
T ss_dssp HHHHHHHHHHHTTTC--SSCCCCCSSHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHhccC--CCCCCCCccccccccHHHHHHH
Confidence 566889999888887 345667775 5999999873
No 38
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=52.71 E-value=4.7 Score=31.39 Aligned_cols=61 Identities=23% Similarity=0.402 Sum_probs=34.4
Q ss_pred CCCCcCCCCHHHHHHHHHHHH-HhcCCCCCCCCCCCCChHHhh---cCChHHHhhhC--CCCChHHHHHHH
Q psy15117 21 IVKDPRQWSESNVAQWLCWAI-REFSLEGVTLHQFYMRGKDIC---SMGKESFLARA--PPFMGDILWEHL 85 (114)
Q Consensus 21 iP~DP~~WS~~~V~~Wl~W~~-~ef~L~~v~~~~F~m~G~~LC---~Lt~edF~~~~--p~~~GdiL~~hL 85 (114)
-|.|+..||.+.|.+||+-.- +||. -++..-.+-|.-|- ..+-+.+-.+. |+ .-.++=.||
T Consensus 171 ~~~~v~~Wtn~rv~~Wl~~i~L~eya---~NL~~sGvhGal~~le~~F~~~~lA~~L~iP~-~k~~~rrhl 237 (265)
T 3tad_C 171 TPSEVQQWTNHRVMEWLRSVDLAEYA---PNLRGSGVHGGLMVLEPRFNVETMAQLLNIPP-NKTLLRRHL 237 (265)
T ss_dssp SGGGGGGCCHHHHHHHHHHTTCTTTG---GGGTTSCCCHHHHHHCTTCCHHHHHHHTTCCT-TCHHHHHHH
T ss_pred CcccccccchHHHHHHHHhCCHHHHH---hHhhhcCccchhhhccCCCCHHHHHHHhCCCC-CchHHHHHH
Confidence 366778999999999997321 2221 12233356666665 55666655443 43 334444444
No 39
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=52.69 E-value=10 Score=30.66 Aligned_cols=20 Identities=30% Similarity=0.621 Sum_probs=18.1
Q ss_pred CCCCCcCCCCHHHHHHHHHH
Q psy15117 20 NIVKDPRQWSESNVAQWLCW 39 (114)
Q Consensus 20 ~iP~DP~~WS~~~V~~Wl~W 39 (114)
.-+.||..||.+.|.+||+-
T Consensus 241 ~~~~dv~vWtn~rV~~Wl~s 260 (334)
T 3tac_B 241 HEIKDVLVWSNDRVIRWIQA 260 (334)
T ss_dssp SSSCCGGGCCHHHHHHHHHH
T ss_pred ccCccccccccHHHHHHHHh
Confidence 57899999999999999983
No 40
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=51.16 E-value=7.4 Score=24.38 Aligned_cols=46 Identities=13% Similarity=0.146 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHHHhcCCCCC--CCCCCC-CChHHhhcCChHHHhhhCCCCCh
Q psy15117 29 SESNVAQWLCWAIREFSLEGV--TLHQFY-MRGKDICSMGKESFLARAPPFMG 78 (114)
Q Consensus 29 S~~~V~~Wl~W~~~ef~L~~v--~~~~F~-m~G~~LC~Lt~edF~~~~p~~~G 78 (114)
+..+|.+||.-. .|... .+..-. ++|..|+.||.+|....--...|
T Consensus 14 ~~~~V~~WL~~l----gL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~G 62 (83)
T 2qkq_A 14 AFGSVGEWLRAI----KMGRYEESFAAAGFGSFELVSQISAEDLLRIGVTLAG 62 (83)
T ss_dssp CCSSHHHHHHHT----TCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHH
T ss_pred ccchHHHHHHHC----CCHHHHHHHHHcCCCcHHHHhhCCHHHHHHCCCCCHH
Confidence 356899999722 23221 122234 78999999999999886533355
No 41
>1wyl_A NEDD9 interacting protein with calponin homology and LIM domains; CH domain, mical, structural genomics; NMR {Homo sapiens} PDB: 2dk9_A
Probab=49.34 E-value=19 Score=23.99 Aligned_cols=36 Identities=11% Similarity=0.330 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhcC-CCCCCCCCCCCChHHhhcCC
Q psy15117 30 ESNVAQWLCWAIREFS-LEGVTLHQFYMRGKDICSMG 65 (114)
Q Consensus 30 ~~~V~~Wl~W~~~ef~-L~~v~~~~F~m~G~~LC~Lt 65 (114)
++....|.+...+.|. +.--|++.---||.++|.+=
T Consensus 9 ~~~LL~W~q~~~~~y~~v~v~nFs~sw~dG~af~aLi 45 (116)
T 1wyl_A 9 QEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALV 45 (116)
T ss_dssp HHHHHHHHHHHHHHSTTCCCSCTTTTTTSSHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCCCCccccccccHHHHHHH
Confidence 5668899999988883 43334443346999999883
No 42
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=49.33 E-value=16 Score=29.39 Aligned_cols=52 Identities=15% Similarity=0.260 Sum_probs=36.4
Q ss_pred hcCCCCCcCCCCHHHHHHHHHHHHHhcCCCC--C-CCCCCCCChHHhhcCChHHHhhhCC
Q psy15117 18 RLNIVKDPRQWSESNVAQWLCWAIREFSLEG--V-TLHQFYMRGKDICSMGKESFLARAP 74 (114)
Q Consensus 18 ~l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~--v-~~~~F~m~G~~LC~Lt~edF~~~~p 74 (114)
+-.+| -..|+.++|..||... ..++. + .+.....+|+.|..||.+|...-.+
T Consensus 31 r~~~P--fs~W~~~~V~aWLe~~---iGmp~~Yv~~~r~nvkSG~~Ll~LSd~dLekeLG 85 (334)
T 3tac_B 31 RKGLP--FAQWDGPTVVAWLELW---LGMPAWYVAACRANVKSGAIMSALSDTEIQREIG 85 (334)
T ss_dssp HTTCC--GGGCCHHHHHHHHHHT---TCCCHHHHHHHHHHCCSHHHHHTCCHHHHHHTTC
T ss_pred cCCCC--hhhCCcHHHHHHHHHH---hcChHHHHHHHHHHccchHHHHhCCHHHHHHHhC
Confidence 34566 5899999999999631 22321 1 2234567899999999999976554
No 43
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=41.70 E-value=5.6 Score=26.15 Aligned_cols=64 Identities=16% Similarity=0.162 Sum_probs=35.0
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCChHHhh---cCChHHHhhhCCCCCh--HHHHHHHHHHH
Q psy15117 22 VKDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMRGKDIC---SMGKESFLARAPPFMG--DILWEHLEILQ 89 (114)
Q Consensus 22 P~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~G~~LC---~Lt~edF~~~~p~~~G--diL~~hL~~Lk 89 (114)
+..-..|+...|.+||.-. .|... .+..-.++|.+++ .||.+|....--...| ..+...++.|+
T Consensus 14 ~~~~~~w~~~~V~~WL~~i----gL~qY~~~F~~~gid~~~~l~~~~lt~~DL~~lGI~~~GhRkkIl~ai~~L~ 84 (103)
T 2ke7_A 14 EMNGPRCPVQTVGQWLESI----GLPQYENHLMANGFDNVQFMGSNVMEDQDLLEIGILNSGHRQRILQAIQLLP 84 (103)
T ss_dssp ---------CCTTHHHHHT----TCTTCHHHHHHTTCCCHHHHHTTCCCHHHHHHHTCCCHHHHHHHHHHHHHSC
T ss_pred cccccCCCHhHHHHHHHHC----CCHHHHHHHHHcCCCcHHHHhcccCCHHHHhHCCCCCHHHHHHHHHHHHHHH
Confidence 3344689999999999733 34332 1223368898875 9999998876533346 23445555554
No 44
>2d87_A Smoothelin splice isoform L2; all alpha, calponin homology domain, actin binding, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2jv9_A 2k3s_A
Probab=41.67 E-value=16 Score=24.97 Aligned_cols=34 Identities=18% Similarity=0.490 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCC---CCChHHhhcCC
Q psy15117 30 ESNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSMG 65 (114)
Q Consensus 30 ~~~V~~Wl~W~~~ef~L~~v~~~~F---~m~G~~LC~Lt 65 (114)
++....|.+...+.|. ++.+++| --||.++|.|=
T Consensus 9 k~~LL~W~q~~~~~y~--~v~V~nFs~sw~DG~af~aLi 45 (128)
T 2d87_A 9 KQMLLDWCRAKTRGYE--HVDIQNFSSSWSDGMAFCALV 45 (128)
T ss_dssp HHHHHHHHHHHSSSCT--TCCCSCTTTTTTSSHHHHHHH
T ss_pred HHHHHHHHHHHhccCC--CCCCCCccccccccHHHHHHH
Confidence 3457888888888773 3444555 46999999883
No 45
>1wyq_A Spectrin beta chain, brain 2; NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Homo sapiens}
Probab=41.41 E-value=23 Score=24.05 Aligned_cols=34 Identities=15% Similarity=0.378 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCC---CCChHHhhcCC
Q psy15117 30 ESNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSMG 65 (114)
Q Consensus 30 ~~~V~~Wl~W~~~ef~L~~v~~~~F---~m~G~~LC~Lt 65 (114)
++-...|.+...+.|. ++++++| --||.++|.|=
T Consensus 9 k~~LL~W~q~~~~~y~--~v~V~nFs~sw~DG~Af~aLi 45 (127)
T 1wyq_A 9 KDALLLWCQMKTAGYP--NVNVHNFTTSWRDGLAFNAIV 45 (127)
T ss_dssp THHHHHHHHHHHHTSS--SCCCSCSSTTSSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC--CCCCCCCcccccccHHHHHHH
Confidence 3567889888888774 3444555 47999999884
No 46
>1bhd_A Utrophin; calponin homology, actin binding, structural protein; 2.00A {Homo sapiens} SCOP: a.40.1.1
Probab=40.23 E-value=23 Score=23.73 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCC---CChHHhhcCC
Q psy15117 32 NVAQWLCWAIREFSLEGVTLHQFY---MRGKDICSMG 65 (114)
Q Consensus 32 ~V~~Wl~W~~~ef~L~~v~~~~F~---m~G~~LC~Lt 65 (114)
-...|.+...+.|. ++.+++|. -||.++|.+=
T Consensus 12 ~LL~W~q~~~~~y~--~v~v~nFs~sw~DG~af~aLi 46 (118)
T 1bhd_A 12 ILLSWVRQTTRPYS--QVNVLNFTTSWTDGLAFNAVL 46 (118)
T ss_dssp HHHHHHHHHHTTST--TCCCCSSSGGGTTSHHHHHHH
T ss_pred HHHHHHHHHhccCC--CCCCCCCcccccCcHHHHHHH
Confidence 36789988888774 34445553 6999999983
No 47
>1bkr_A Spectrin beta chain; filamentous actin-binding domain, cytoskeleton; 1.10A {Homo sapiens} SCOP: a.40.1.1 PDB: 1aa2_A
Probab=37.60 E-value=21 Score=23.47 Aligned_cols=34 Identities=15% Similarity=0.380 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCC---CCChHHhhcCCh
Q psy15117 31 SNVAQWLCWAIREFSLEGVTLHQF---YMRGKDICSMGK 66 (114)
Q Consensus 31 ~~V~~Wl~W~~~ef~L~~v~~~~F---~m~G~~LC~Lt~ 66 (114)
+-...|.+...+.|. ++.+++| --||.++|.|=.
T Consensus 6 ~~LL~W~q~~~~~y~--~v~v~nFs~sw~dG~af~aLih 42 (109)
T 1bkr_A 6 DALLLWCQMKTAGYP--NVNIHNFTTSWRDGMAFNALIH 42 (109)
T ss_dssp HHHHHHHHHHTTTCT--TCCCSSSSGGGTTSHHHHHHHH
T ss_pred HHHHHHHHHHHccCC--CCCCCCCcccccccHHHHHHHH
Confidence 346777777666663 4455666 379999999843
No 48
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=36.68 E-value=10 Score=24.39 Aligned_cols=56 Identities=13% Similarity=0.024 Sum_probs=31.3
Q ss_pred cCCCCCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-hHHhhcCChHHHhhhCCCCCh
Q psy15117 19 LNIVKDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG 78 (114)
Q Consensus 19 l~iP~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~-G~~LC~Lt~edF~~~~p~~~G 78 (114)
+.=|..+..|+...|.+||.-. .|... .+..-.++ ...|+.|+.+|....--...|
T Consensus 15 ~~~~~~~~~~~~~~V~eWL~~l----gL~qY~~~F~~~g~~~le~l~~lt~~DL~~lGIt~~G 73 (86)
T 2k4p_A 15 VPRGSHMSGLGEAGMSAWLRAI----GLERYEEGLVHNGWDDLEFLSDITEEDLEEAGVQDPA 73 (86)
T ss_dssp -------CCCCSCSSHHHHHTT----TCGGGHHHHHTTTCCCHHHHTTCCHHHHHHTTCCCHH
T ss_pred CCCCCcCCCCCcCcHHHHHHHC----CCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCCHH
Confidence 3446677899999999999722 22211 12223454 467889999999876432345
No 49
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=34.32 E-value=17 Score=22.46 Aligned_cols=59 Identities=14% Similarity=0.198 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHHhcCCCCC--CCCCCCC-ChHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHHc
Q psy15117 29 SESNVAQWLCWAIREFSLEGV--TLHQFYM-RGKDICSMGKESFLARAPPFMG--DILWEHLEILQKA 91 (114)
Q Consensus 29 S~~~V~~Wl~W~~~ef~L~~v--~~~~F~m-~G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~~ 91 (114)
+...|.+||.-. .|... .+..-.+ ++..|+.||.+|+...--...| ..+...++.|+..
T Consensus 10 ~~~~v~~WL~~l----gL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhrkkIl~ai~~l~~~ 73 (82)
T 1b4f_A 10 SFNTVDEWLEAI----KMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVMRAQ 73 (82)
T ss_dssp CCSSHHHHHHHT----TCGGGHHHHHHTTCCSHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHC----CCHHHHHHHHHcCCCCHHHHHhCCHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 445899999732 23222 1222245 6888999999999976533346 3455666677654
No 50
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.65 E-value=15 Score=23.29 Aligned_cols=63 Identities=11% Similarity=0.049 Sum_probs=38.5
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCCC-hHHhhcCChHHHhhhCCCCCh--HHHHHHHHHHHHc
Q psy15117 25 PRQWSESNVAQWLCWAIREFSLEGV--TLHQFYMR-GKDICSMGKESFLARAPPFMG--DILWEHLEILQKA 91 (114)
Q Consensus 25 P~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m~-G~~LC~Lt~edF~~~~p~~~G--diL~~hL~~Lk~~ 91 (114)
|..-+...|.+||.-. .|... .+..-.++ +..|+.|+.+|+...--...| ..+...++.|+..
T Consensus 7 p~~~~~~~V~~WL~~l----gL~~Y~~~F~~~~~~~~~~l~~lt~~dL~~lGI~~~GhRkkIl~ai~~l~~~ 74 (88)
T 2e8n_A 7 GEGVPFRTVSEWLESI----KMQQYTEHFMAAGYTAIEKVVQMTNDDVKRIGVRLPGHQKRIAYSLLGLKDQ 74 (88)
T ss_dssp CCCCSCSSHHHHHHHT----TCGGGHHHHHHHTCSSHHHHTTSCTTHHHHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCchhhHHHHHHHC----CCHHHHHHHHHcCCChHHHHHhCCHHHHHHCCCCChhHHHHHHHHHHHHHHh
Confidence 3333346899999732 33322 12233577 899999999998776533346 3455666777643
No 51
>1p2x_A RNG2 protein, RAS GTPase-activating-like protein; helices, bundle, protein binding; 2.21A {Schizosaccharomyces pombe} SCOP: a.40.1.1
Probab=33.40 E-value=13 Score=26.28 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhcCCCC-CCCCCCCCChHHhhcC
Q psy15117 30 ESNVAQWLCWAIREFSLEG-VTLHQFYMRGKDICSM 64 (114)
Q Consensus 30 ~~~V~~Wl~W~~~ef~L~~-v~~~~F~m~G~~LC~L 64 (114)
.+++.+||.-+..+ +|++ .++..-=.||.-||.|
T Consensus 13 ~~e~~~WIe~~l~~-~l~~~~~l~~~LkdGvvLCkL 47 (159)
T 1p2x_A 13 VDEAKKWIEECLGT-DLGPTSTFEQSLRNGVVLALL 47 (159)
T ss_dssp HHHHHHHHHHHHTS-CCCCGGGHHHHTTTSHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCChHHHHHHHcchHHHHHH
Confidence 57899999977754 3432 1222234566666665
No 52
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=31.26 E-value=32 Score=21.97 Aligned_cols=65 Identities=8% Similarity=0.136 Sum_probs=36.9
Q ss_pred CCCcCCCCHHHHHHHHHHHHHhcCCCCC--CCCCCCC-ChHHhhcCChHHHhhhCCCCChH--HHHHHHHHHHH
Q psy15117 22 VKDPRQWSESNVAQWLCWAIREFSLEGV--TLHQFYM-RGKDICSMGKESFLARAPPFMGD--ILWEHLEILQK 90 (114)
Q Consensus 22 P~DP~~WS~~~V~~Wl~W~~~ef~L~~v--~~~~F~m-~G~~LC~Lt~edF~~~~p~~~Gd--iL~~hL~~Lk~ 90 (114)
|..|..-+...|.+||.-. .|... .+..-.+ ++..|+.|+.+|+...--...|+ .+...++.|+.
T Consensus 18 ~~~p~~~~~~~V~~WL~~l----gL~~Y~~~F~~~g~~~~~~l~~lt~~DL~~lGI~~~GhrkkIl~ai~~L~~ 87 (94)
T 1b0x_A 18 PSSPEFSAVVSVGDWLQAI----KMDRYKDNFTAAGYTTLEAVVHMSQDDLARIGITAITHQNKILSSVQAMRT 87 (94)
T ss_dssp -----CCSSCCHHHHHHHT----TCGGGHHHHHHTTCCSHHHHTTCCHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcchhHHHHHHHHC----CcHHHHHHHHHcCCCCHHHHhhCCHHHHHHCCCCChhHHHHHHHHHHHHHH
Confidence 3445555567899999732 23221 1222345 67899999999988765433463 44456666654
No 53
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=31.01 E-value=28 Score=20.68 Aligned_cols=30 Identities=3% Similarity=0.177 Sum_probs=25.0
Q ss_pred ChHHhhcCChHHHhhhCCCCC-hHHHHHHHH
Q psy15117 57 RGKDICSMGKESFLARAPPFM-GDILWEHLE 86 (114)
Q Consensus 57 ~G~~LC~Lt~edF~~~~p~~~-GdiL~~hL~ 86 (114)
+=++++..|.+|.....+... +..+|.+|+
T Consensus 26 s~~~i~~As~eeL~~vig~~~~A~~I~~~l~ 56 (63)
T 2a1j_A 26 NIAELAALSQDELTSILGNAANAKQLYDFIH 56 (63)
T ss_dssp SHHHHHTCCHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CHHHHHHCCHHHHHHHcCchHHHHHHHHHHh
Confidence 457899999999999987666 888998875
No 54
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=29.66 E-value=40 Score=22.68 Aligned_cols=48 Identities=8% Similarity=0.201 Sum_probs=39.9
Q ss_pred CcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhCC
Q psy15117 24 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARAP 74 (114)
Q Consensus 24 DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~p 74 (114)
|+..=|=++|..|+ ...|+|..+.+..++-+|-..|--|+.+|..+.-
T Consensus 32 ~~~~~tweel~~mv---k~~f~L~~~~IkY~DEenD~V~i~Sq~E~eEAlk 79 (101)
T 1wj6_A 32 DPENTTWADIEAMV---KVSFDLNTIQIKYLDEENEEVSINSQGEYEEALK 79 (101)
T ss_dssp CTTTSCHHHHHHHH---HHHHCCSSBCCEEECTTSCEECCCSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHH---HHHcCCCceEEEEecCCCCEEEEecHHHHHHHHH
Confidence 55555667888877 6889999998889999999999999999987763
No 55
>1ujo_A Transgelin; CH domain, actin binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: a.40.1.1
Probab=29.22 E-value=20 Score=24.90 Aligned_cols=34 Identities=9% Similarity=0.276 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHhcCCCCC-----CCCCCCCChHHhhcC
Q psy15117 30 ESNVAQWLCWAIREFSLEGV-----TLHQFYMRGKDICSM 64 (114)
Q Consensus 30 ~~~V~~Wl~W~~~ef~L~~v-----~~~~F~m~G~~LC~L 64 (114)
++++++||.-+..+ +++.. ++..-=.||.-||.|
T Consensus 11 e~e~~~WIe~~l~~-~l~~~~~~~~~f~~~LkDGvvLCkL 49 (144)
T 1ujo_A 11 EERLVEWIVVQCGP-DVGRPDRGRLGFQVWLKNGVILSKL 49 (144)
T ss_dssp HHHHHHHHHHHHCT-TTCCCCSSSSSHHHHTTSSHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCCCcCCcHHHHHHHHcchHHHHHH
Confidence 46899999877754 34322 122224678888876
No 56
>1z00_B DNA repair endonuclease XPF; helix-hairpin-helix, hydrolase; HET: DNA; NMR {Homo sapiens} SCOP: a.60.2.5 PDB: 2aq0_A*
Probab=23.50 E-value=36 Score=21.67 Aligned_cols=29 Identities=3% Similarity=0.180 Sum_probs=24.7
Q ss_pred hHHhhcCChHHHhhhCCCCC-hHHHHHHHH
Q psy15117 58 GKDICSMGKESFLARAPPFM-GDILWEHLE 86 (114)
Q Consensus 58 G~~LC~Lt~edF~~~~p~~~-GdiL~~hL~ 86 (114)
=++||.+|.++.....+... +..+|.+|.
T Consensus 41 l~~i~~AS~eEL~~vig~~~~A~~I~~~l~ 70 (84)
T 1z00_B 41 IAELAALSQDELTSILGNAANAKQLYDFIH 70 (84)
T ss_dssp HHHHHHSCHHHHHHHHSCHHHHHHHHHHHT
T ss_pred HHHHHHCCHHHHHHHhCchHHHHHHHHHHH
Confidence 36899999999999988666 899999884
No 57
>2jpf_A Hypothetical protein; all alpha helical protein, type III secretion effector protein, structural genomics; NMR {Bordetella parapertussis}
Probab=22.28 E-value=34 Score=23.21 Aligned_cols=29 Identities=31% Similarity=0.367 Sum_probs=21.6
Q ss_pred CChHHHhhhCCCCChHHHHHHHHHHHHcccc
Q psy15117 64 MGKESFLARAPPFMGDILWEHLEILQKANAK 94 (114)
Q Consensus 64 Lt~edF~~~~p~~~GdiL~~hL~~Lk~~~~~ 94 (114)
--.++|..|... +-|.||.||+-- +++++
T Consensus 67 rrpdeftarlqq-stdalyshleaq-wakqh 95 (127)
T 2jpf_A 67 RRPDEFTARLQQ-STDALYSHLEAQ-WAKQH 95 (127)
T ss_dssp HCHHHHHHHHHT-TTHHHHHHHHHH-GGGTC
T ss_pred cCcHHHHHHHHH-hHHHHHHHHHHH-HHHhc
Confidence 356789888875 789999999853 55444
No 58
>3i6x_A P195, RAS GTPase-activating-like protein iqgap1; all helical, calmodulin-binding, cell membrane, membrane, phosphoprotein, protein binding; 2.50A {Homo sapiens}
Probab=21.47 E-value=19 Score=26.35 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHhcCCCC-CCCCCCCCChHHhhcC
Q psy15117 31 SNVAQWLCWAIREFSLEG-VTLHQFYMRGKDICSM 64 (114)
Q Consensus 31 ~~V~~Wl~W~~~ef~L~~-v~~~~F~m~G~~LC~L 64 (114)
+++++||.-+..+ +|++ .++..-=.||.-||.|
T Consensus 50 ~e~~~WIe~~lg~-~l~~~~~l~~~LrdGvvLCkL 83 (193)
T 3i6x_A 50 EEAKRWMEACLGE-DLPPTTELEEGLRNGVYLAKL 83 (193)
T ss_dssp HHHHHHHHHHHSS-CCCCGGGHHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCChHHHHHHhccHHHHHHH
Confidence 4789999877764 4542 1222234577777766
No 59
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=20.23 E-value=38 Score=22.20 Aligned_cols=47 Identities=9% Similarity=0.209 Sum_probs=38.6
Q ss_pred CcCCCCHHHHHHHHHHHHHhcCCCCCCCCCCCCChHHhhcCChHHHhhhC
Q psy15117 24 DPRQWSESNVAQWLCWAIREFSLEGVTLHQFYMRGKDICSMGKESFLARA 73 (114)
Q Consensus 24 DP~~WS~~~V~~Wl~W~~~ef~L~~v~~~~F~m~G~~LC~Lt~edF~~~~ 73 (114)
|+..=|=++|..|+ ...|+|+++.+..++-+|-..|--|+.+|..+.
T Consensus 24 ~~~~~tweel~~mv---k~~f~L~~~~ikY~DEenD~v~i~Sq~E~eEAl 70 (87)
T 2bkf_A 24 DPENTTWADIEAMV---KVSFDLNTIQIKYLDEENEEVSINSQGEYEEAL 70 (87)
T ss_dssp CGGGCCHHHHHHHH---HHHHTCSSEEEEEECTTSCEEEECSHHHHHHHH
T ss_pred cCCCCCHHHHHHHH---HHHcCCCceEEEEEcCCCCEEEEecHHHHHHHH
Confidence 44444667788777 688999988888899999999999999998765
Done!