BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1512
(679 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90805|CNG1_CHICK Cyclic nucleotide-gated channel cone photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 735
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/567 (38%), Positives = 309/567 (54%), Gaps = 92/567 (16%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
FV DP+ Y W I++ YN+ ++I R F E+ + + +W LDY +D++YV D+
Sbjct: 201 FVIDPSSNMYYNWLTIIAAPVFYNWCMLICRACFDELQIDHIKLWLFLDYCSDIIYVFDM 260
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRL 207
+ FRTG+LE G+L D KLRDHY + F +D L LLP D YL +G N LR RL
Sbjct: 261 FVRFRTGFLEQGLLVKDEKKLRDHYTQTVQFKLDVLSLLPTDLAYLKLGLNYPELRFNRL 320
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYG 267
++I R + F DRTE TNYPN+FR +L+ Y+L+I HWN C+Y I K GFG+ +WVY
Sbjct: 321 LRIARLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKVIGFGTDSWVYP 380
Query: 268 DSDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
+ + + ++Y+ S YW TL LTTIG+ P P EY FV++ L G+L+FAT++G+
Sbjct: 381 NVSIPEYGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVIDFLVGVLIFATIVGN 440
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++A+R EFQAK+D +K YM R+V L+ +VIKWFDYLW +K DE++ +
Sbjct: 441 VGSMISNMNASRAEFQAKVDSIKQYMHFRKVTKDLEARVIKWFDYLWTNKKTVDEKEVL- 499
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +PDKLKAEI
Sbjct: 500 -------------------------------------------------KNLPDKLKAEI 510
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGN----------RRTA 494
AINVHLDTLK+V IFQ+ EAG L ELVL+L+P +FSPGDYIC+KG+ + A
Sbjct: 511 AINVHLDTLKKVRIFQDCEAGLLIELVLKLKPTVFSPGDYICKKGDIGREMYIIKEGKLA 570
Query: 495 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGN 554
V G + VLS + I++ ++ K GN
Sbjct: 571 VVADDGITQFVVLSDGSYFG-------------EISILNIKGSK-------------SGN 604
Query: 555 RRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKE 614
RRTA++RS+GYSDLF LSK D+ + L EYP A+ LE + L K E + G +
Sbjct: 605 RRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEEAAKAGAD 664
Query: 615 MYIVNR--GRLQVVADNGKTVLATLRA 639
+ RL+ D +T A L A
Sbjct: 665 PKDLEEKIDRLETALDTLQTRFARLLA 691
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
+KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+
Sbjct: 553 KKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNI 597
>sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel alpha-3 OS=Homo sapiens
GN=CNGA3 PE=1 SV=2
Length = 694
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/526 (39%), Positives = 298/526 (56%), Gaps = 90/526 (17%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
V DP+ Y W ++L YN++++I R F E+ E L++W LDY AD++YV+D+
Sbjct: 159 IVVDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDV 218
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRL 207
L+ RTG+LE G++ +D+ +L HY +T F +D L L+P D YL +G N +R RL
Sbjct: 219 LVRARTGFLEQGLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPEVRFNRL 278
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYG 267
+K R + F DRTE TNYPN+FR +L+ Y+L+I HWN C+Y I K GFG+ +WVY
Sbjct: 279 LKFSRLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYP 338
Query: 268 DSDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
+ + + ++Y+ S YW TL LTTIG+ P P EY FV+V L G+L+FAT++G+
Sbjct: 339 NISIPEHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVVDFLVGVLIFATIVGN 398
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++A+R EFQAK+D +K YM+ R+V L+ +VI+WFDYLW +K DE++ +
Sbjct: 399 VGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVL- 457
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +PDKLKAEI
Sbjct: 458 -------------------------------------------------KSLPDKLKAEI 468
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGN----------RRTA 494
AINVHLDTLK+V IFQ+ EAG L ELVL+LRP +FSPGDYIC+KG+ + A
Sbjct: 469 AINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEMYIINEGKLA 528
Query: 495 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGN 554
V G + VLS + I++ ++ K GN
Sbjct: 529 VVADDGVTQFVVLSDGSYFG-------------EISILNIKGSK-------------SGN 562
Query: 555 RRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 600
RRTA++RS+GYSDLF LSK D+ + L EYP A+ LE + L K
Sbjct: 563 RRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMK 608
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
+KG++GKEMYI+N G+L VVAD+G T L GSYFGEISILN+
Sbjct: 511 KKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGSYFGEISILNI 555
>sp|Q90980|CNG3_CHICK Cyclic nucleotide-gated channel rod photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 645
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 303/540 (56%), Gaps = 90/540 (16%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
F+ DPAG Y W +++ +YN+ +II R F E+ + L +WF +DY++D++Y+ D+
Sbjct: 108 FIIDPAGNMYYNWLFCITMPVMYNWTMIIARACFDELQNDYLAVWFIVDYVSDVIYIADM 167
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRL 207
+ RTGYLE G+L + KL++ Y +S F +D L ++P D LY +G N LR+ RL
Sbjct: 168 FVRTRTGYLEQGLLVKEEQKLKEKYKSSLQFKLDFLSIIPTDLLYFKLGLNYPELRINRL 227
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYG 267
+++ R + F RTE TNYPN+FR S+L+ Y+++I HWN C+Y+ I K GFG+ WVY
Sbjct: 228 LRVARMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYP 287
Query: 268 DSDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
++ + + ++Y+ S YW TL LTTIG+ P P EYFFV+V L G+L+FAT++G+
Sbjct: 288 NTSHPEFARLTRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGN 347
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++AAR EFQAK+D +K YM R V ++ +VIKWFDYLW +K DE + +
Sbjct: 348 VGSMISNMNAARAEFQAKIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVL- 406
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +PDKL+AEI
Sbjct: 407 -------------------------------------------------KYLPDKLRAEI 417
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGN----------RRTA 494
AINVHL+TLK+V IF + EAG L ELVL+L+P ++SPGDYICRKG+ + A
Sbjct: 418 AINVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLA 477
Query: 495 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGN 554
V G + VLS + I++ ++ K GN
Sbjct: 478 VVADDGVTQFVVLSDGSYFG-------------EISILNIKGSK-------------AGN 511
Query: 555 RRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKE 614
RRTA++RS+GYSDLF LSK D+ + L EYP A+ LE + L K +E +G +
Sbjct: 512 RRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGKQILMKDGLLDIEVANLGSD 571
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM-GTAGTN 657
KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+ G+ N
Sbjct: 461 KGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAGN 511
>sp|Q29441|CNGA3_BOVIN Cyclic nucleotide-gated cation channel alpha-3 OS=Bos taurus
GN=CNGA3 PE=2 SV=1
Length = 706
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 317/564 (56%), Gaps = 84/564 (14%)
Query: 88 TFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVID 147
+ V DP+ Y+W ++++ YN+ +++ R F E+ E L++W LDY AD++Y +D
Sbjct: 177 SVVMDPSSNMYYHWLTVIAVPVFYNWCLLVCRACFDELQSEHLMLWLVLDYSADILYGMD 236
Query: 148 ILIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFR 206
+L+ RTG+LE G++ D+++L HY + F +D L L+P D Y +G N LR R
Sbjct: 237 MLVRARTGFLEQGLMVMDASRLWKHYTQTLHFKLDVLSLVPTDLAYFKLGMNYPELRFNR 296
Query: 207 LVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVY 266
L+K+ R + F DRTE TNYPN+FR +L+ Y+L+I HWN C+Y I K GFG+ +WVY
Sbjct: 297 LLKLARLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVY 356
Query: 267 GDSDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLG 323
+ + + ++Y+ S YW TL LTTIG+ P P EY FV++ L G+L+FAT++G
Sbjct: 357 PNVSNPEYGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVIDFLVGVLIFATIVG 416
Query: 324 HVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAV 383
+V +++++++A+R EFQAK+D +K YM+ R+V L+ +VI+WFDYLW +K DE++ +
Sbjct: 417 NVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVL 476
Query: 384 SCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAE 443
K +PDKLKAE
Sbjct: 477 --------------------------------------------------KSLPDKLKAE 486
Query: 444 IAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSD 503
IAINVHLDTL++V IFQ+ EAG L ELVL+LRP +FSPGDYIC+KG+ +G +
Sbjct: 487 IAINVHLDTLRKVRIFQDCEAGLLVELVLKLRPAVFSPGDYICKKGD--------IG-RE 537
Query: 504 LFVLSKTDMWDVLKEYPAARVRLE------SIAVKRLQKYKRTPLEKGISPSPFPGNRRT 557
++++ + + V ++ V L I++ ++ K GNRRT
Sbjct: 538 MYIIKEGKLAVVAEDGITQFVVLGDGSYFGEISILNIKGSK-------------SGNRRT 584
Query: 558 ASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKEMYI 617
A++RS+GYSDLF LSK D+ + L EYP A+ LE + L K E + G +
Sbjct: 585 ANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELAKAGADPKD 644
Query: 618 VNRG--RLQVVADNGKTVLATLRA 639
+ L+ D+ +T A L A
Sbjct: 645 IEEKVEHLETSLDSLQTRFARLLA 668
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
+KG++G+EMYI+ G+L VVA++G T L GSYFGEISILN+
Sbjct: 530 KKGDIGREMYIIKEGKLAVVAEDGITQFVVLGDGSYFGEISILNI 574
>sp|Q00195|CNGA2_RAT Cyclic nucleotide-gated olfactory channel OS=Rattus norvegicus
GN=Cnga2 PE=2 SV=1
Length = 664
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 317/555 (57%), Gaps = 84/555 (15%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
FV DPAG + Y W ++++ LYN+ +++ R F ++ R V+W LDY +D +Y+ D+
Sbjct: 133 FVLDPAGDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRNYFVVWLVLDYFSDTVYIADL 192
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSI-LRLFRL 207
+I RTG+LE G+L D KLRD+Y+++ F +D ++P D +Y ++G +S +R RL
Sbjct: 193 IIRLRTGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHSPEVRFNRL 252
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVY- 266
+ R + F DRTE T+YPN+FR S+L+ Y+LVI HWN C+Y++I K+ GFG WVY
Sbjct: 253 LHFARMFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYVISKSIGFGVDTWVYP 312
Query: 267 --GDSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
D + + ++Y+ YW TL LTTIG+ P P EY FVI L G+L+FAT++G+
Sbjct: 313 NITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 372
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++A R EFQAK+D VK YM+ R+V ++ KVIKWFDYLW +K DE + +
Sbjct: 373 VGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKDMEAKVIKWFDYLWTNKKTVDEREVL- 431
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +P KL+AEI
Sbjct: 432 -------------------------------------------------KNLPAKLRAEI 442
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDL 504
AINVHL TLK+V IFQ+ EAG L ELVL+LRP +FSPGDYICRKG+ +G ++
Sbjct: 443 AINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGD--------IG-KEM 493
Query: 505 FVLSKTDMW----DVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTA 558
+++ + + D + +Y +A I++ ++ K GNRRTA
Sbjct: 494 YIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKM-------------GNRRTA 540
Query: 559 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKEMYIV 618
++RS+GYSDLF LSK D+ + + EYP A+ LE + L K L++ EV M +
Sbjct: 541 NIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILM--KEGLLDENEVAASMEVD 598
Query: 619 NRGRLQVVADNGKTV 633
+ +L+ + N T+
Sbjct: 599 VQEKLEQLETNMDTL 613
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
KG++GKEMYI+ G+L VVAD+G T A L AGS FGEISILN+
Sbjct: 486 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNI 529
>sp|Q62398|CNGA2_MOUSE Cyclic nucleotide-gated olfactory channel OS=Mus musculus GN=Cnga2
PE=2 SV=2
Length = 664
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 317/555 (57%), Gaps = 84/555 (15%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
FV DPAG + Y W ++++ LYN+ +++ R F ++ R V+W LDY +D +Y+ D+
Sbjct: 133 FVLDPAGDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRNYFVVWLVLDYFSDTVYIADL 192
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSI-LRLFRL 207
+I RTG+LE G+L D KLRD+Y+++ F +D ++P D +Y ++G +S +R RL
Sbjct: 193 IIRLRTGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHSPEVRFNRL 252
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVY- 266
+ R + F DRTE T+YPN+FR S+L+ Y+LVI HWN C+Y+ I K+ GFG WVY
Sbjct: 253 LHFARMFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGVDTWVYP 312
Query: 267 --GDSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
D + + ++Y+ YW TL LTTIG+ P P EY FVI L G+L+FAT++G+
Sbjct: 313 NITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 372
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++A R EFQAK+D VK YM+ R+V ++ KVIKWFDYLW +K DE + +
Sbjct: 373 VGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKDMEAKVIKWFDYLWTNKKTVDEREVL- 431
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +P KL+AEI
Sbjct: 432 -------------------------------------------------KNLPAKLRAEI 442
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDL 504
AINVHL TLK+V IFQ+ EAG L ELVL+LRP +FSPGDYICRKG+ +G ++
Sbjct: 443 AINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGD--------IG-KEM 493
Query: 505 FVLSKTDMW----DVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTA 558
+++ + + D + +Y +A I++ ++ K GNRRTA
Sbjct: 494 YIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKM-------------GNRRTA 540
Query: 559 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKEMYIV 618
++RS+GYSDLF LSK D+ + + EYP A+ LE + L K L++ EV M +
Sbjct: 541 NIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILM--KEGLLDENEVAASMEVD 598
Query: 619 NRGRLQVVADNGKTV 633
+ +L+ + N +T+
Sbjct: 599 VQEKLEQLETNMETL 613
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
KG++GKEMYI+ G+L VVAD+G T A L AGS FGEISILN+
Sbjct: 486 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNI 529
>sp|Q28718|CNGA2_RABIT Cyclic nucleotide-gated olfactory channel OS=Oryctolagus cuniculus
GN=CNGA2 PE=2 SV=1
Length = 664
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/555 (38%), Positives = 316/555 (56%), Gaps = 84/555 (15%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
FV DPAG + Y W ++++ LYN+ +++ R F ++ R ++W LDY +D++Y+ D+
Sbjct: 131 FVLDPAGDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRGYFLVWLVLDYFSDVVYIADL 190
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGF-NSILRLFRL 207
I RTG+LE G+L D KLRD+Y+++ F +D ++P D +Y ++G N LR RL
Sbjct: 191 FIRLRTGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHNPELRFNRL 250
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVY- 266
+ R + F DRTE T+YPN+FR S+L+ Y+LVI HWN C+Y+ I K+ GFG WVY
Sbjct: 251 LHFARMFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGVDTWVYP 310
Query: 267 --GDSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
D + + ++Y+ YW TL LTTIG+ P P EY FVI L G+L+FAT++G+
Sbjct: 311 NITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 370
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++A R EFQAK+D VK YM+ R+V ++ KVIKWFDYLW +K DE + +
Sbjct: 371 VGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKEMEAKVIKWFDYLWTNKKTVDEREVL- 429
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +P KL+AEI
Sbjct: 430 -------------------------------------------------KNLPAKLRAEI 440
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDL 504
AINVHL TLK+V IFQ+ EAG L ELVL+LRP +FSPGDYICRKG+ +G ++
Sbjct: 441 AINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGD--------IG-KEM 491
Query: 505 FVLSKTDMW----DVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTA 558
+++ + + D + +Y +A I++ ++ K GNRRTA
Sbjct: 492 YIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKM-------------GNRRTA 538
Query: 559 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKEMYIV 618
++RS+GYSDLF LSK D+ + + EYP A+ LE + L K L++ EV M +
Sbjct: 539 NIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILM--KEGLLDENEVAASMEVD 596
Query: 619 NRGRLQVVADNGKTV 633
+ +L+ + N +T+
Sbjct: 597 VQEKLKQLETNMETL 611
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
KG++GKEMYI+ G+L VVAD+G T A L AGS FGEISILN+
Sbjct: 484 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNI 527
>sp|Q9JJZ8|CNGA3_MOUSE Cyclic nucleotide-gated cation channel alpha-3 OS=Mus musculus
GN=Cnga3 PE=1 SV=2
Length = 631
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 303/562 (53%), Gaps = 99/562 (17%)
Query: 62 FHGN------TGADCAVHRVAERYPRSSGPNLT---FVFDPAGRFSYYWSMIVSLAFLYN 112
FHG+ T A E+ P G V DP+ Y W ++L YN
Sbjct: 64 FHGSELKEVSTRESNAQPNPGEQKPPDGGEGRKEEPIVVDPSSNIYYRWLTAIALPVFYN 123
Query: 113 FWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDILIHFRTGYLEDGVLQTDSTKLRDH 172
+ +++ R F E+ E L +W LDY AD++YV+D+L+ RTG+LE G++ D+ +L H
Sbjct: 124 WCLLVCRACFDELQSEHLTLWLVLDYSADVLYVLDMLVRARTGFLEQGLMVRDTKRLWKH 183
Query: 173 YMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRLVKIYRFWAFMDRTERHTNYPNLFR 231
Y + F +D L L+P D YL +G N LR RL+K R + F DRTE TNYPN+FR
Sbjct: 184 YTKTLHFKLDILSLIPTDLAYLKLGVNYPELRFNRLLKFSRLFEFFDRTETRTNYPNVFR 243
Query: 232 SSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTD---VVKQYLQSYYWCTLA 288
+L+ Y L+I HWN C+Y I K GFG+ +WVY ++ + + ++Y+ S YW TL
Sbjct: 244 IGNLVLYTLIIIHWNACIYFAISKFIGFGTDSWVYPNTSKPEYARLSRKYIYSLYWSTLT 303
Query: 289 LTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKT 348
LTTIG+ P P EY FV++ L G+L+FAT++G+V +++++++A R EFQAK+D VK
Sbjct: 304 LTTIGETPPPVKDEEYLFVVIDFLVGILIFATIVGNVGSMISNMNAPRVEFQAKIDSVKQ 363
Query: 349 YMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIA 408
YM+ R+V L+ +VI+WFDYLW +K DE++ +
Sbjct: 364 YMQFRKVTKDLETRVIRWFDYLWANRKTVDEKEVL------------------------- 398
Query: 409 IVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLC 468
K +PDKLKAEIAINVHLDTLK+V IFQ+ EAG L
Sbjct: 399 -------------------------KNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLV 433
Query: 469 ELVLRLRPVLFSPGDYICRKGN----------RRTASVRSVGYSDLFVLSKTDMWDVLKE 518
ELVL+LRP +FSPGDYIC+KG+ + A V G + VLS +
Sbjct: 434 ELVLKLRPTVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFG---- 489
Query: 519 YPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWD 578
I++ ++ K GNRRTA++RS+GYSDLF LSK D+ +
Sbjct: 490 ---------EISILNIKGSK-------------SGNRRTANIRSIGYSDLFCLSKDDLME 527
Query: 579 VLKEYPAARVRLESIAVKRLQK 600
L EYP A+ LE + L K
Sbjct: 528 ALTEYPDAKRALEEKGRQILMK 549
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
+KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+
Sbjct: 452 KKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNI 496
>sp|Q16280|CNGA2_HUMAN Cyclic nucleotide-gated olfactory channel OS=Homo sapiens GN=CNGA2
PE=2 SV=2
Length = 664
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/555 (37%), Positives = 316/555 (56%), Gaps = 84/555 (15%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
FV DPAG + Y W ++++ LYN+ +++ R F ++ + ++W LDY++D++Y+ D+
Sbjct: 131 FVLDPAGDWYYCWLFVIAMPVLYNWCLLVARACFSDLQKGYYLVWLVLDYVSDVVYIADL 190
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSI-LRLFRL 207
I RTG+LE G+L D+ KLRD+Y+++ F +D ++P D +Y ++ +S +R RL
Sbjct: 191 FIRLRTGFLEQGLLVKDTKKLRDNYIHTLQFKLDVASIIPTDLIYFAVDIHSPEVRFNRL 250
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVY- 266
+ R + F DRTE TNYPN+FR S+L+ Y+LVI HWN C+Y+ I K+ GFG WVY
Sbjct: 251 LHFARMFEFFDRTETRTNYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGVDTWVYP 310
Query: 267 --GDSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
D + + ++Y+ YW TL LTTIG+ P P EY FVI L G+L+FAT++G+
Sbjct: 311 NITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 370
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++A R EFQAK+D VK YM+ R+V ++ KVI+WFDYLW +K DE + +
Sbjct: 371 VGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKGMEAKVIRWFDYLWTNKKTVDEREIL- 429
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +P KL+AEI
Sbjct: 430 -------------------------------------------------KNLPAKLRAEI 440
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDL 504
AINVHL TLK+V IF + EAG L ELVL+LRP +FSPGDYICRKG+ +G ++
Sbjct: 441 AINVHLSTLKKVRIFHDCEAGLLVELVLKLRPQVFSPGDYICRKGD--------IG-KEM 491
Query: 505 FVLSKTDMW----DVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTA 558
+++ + + D + +Y +A I++ ++ K GNRRTA
Sbjct: 492 YIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKM-------------GNRRTA 538
Query: 559 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKEMYIV 618
++RS+GYSDLF LSK D+ + + EYP A+ LE + L K L++ EV M +
Sbjct: 539 NIRSLGYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILM--KEGLLDENEVATSMEVD 596
Query: 619 NRGRLQVVADNGKTV 633
+ +L + N +T+
Sbjct: 597 VQEKLGQLETNMETL 611
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
KG++GKEMYI+ G+L VVAD+G T A L AGS FGEISILN+
Sbjct: 484 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNI 527
>sp|Q00194|CNGA1_BOVIN cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1
Length = 690
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 293/525 (55%), Gaps = 90/525 (17%)
Query: 90 VFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL 149
V DP+G Y W ++L +YN+ +II R F E+ + L W DY++D++Y++D+
Sbjct: 155 VIDPSGNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLAFDYLSDVVYLLDMF 214
Query: 150 IHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRLV 208
+ RTGYLE G+L + KL D Y ++ F +D L ++P D LY+ G+N +RL RL+
Sbjct: 215 VRTRTGYLEQGLLVKEERKLIDKYKSTFQFKLDVLSVIPTDLLYIKFGWNYPEIRLNRLL 274
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
+I R + F RTE TNYPN+FR S+L+ Y+++I HWN C+Y I K GFG+ WVY D
Sbjct: 275 RISRMFEFFQRTETRTNYPNIFRISNLVMYIIIIIHWNACVYFSISKAIGFGNDTWVYPD 334
Query: 269 SDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHV 325
+ D + ++Y+ S YW TL LTTIG+ P P EYFFV+ L G+L+FAT++G++
Sbjct: 335 VNDPDFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVADFLIGVLIFATIVGNI 394
Query: 326 ANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSC 385
+++++++AAR EFQA++D +K YM R V ++ +VIKWFDYLW +K DE + +
Sbjct: 395 GSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVL-- 452
Query: 386 LPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIA 445
K +PDKL+AEIA
Sbjct: 453 ------------------------------------------------KYLPDKLRAEIA 464
Query: 446 INVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGN----------RRTAS 495
INVHLDTLK+V IF + EAG L ELVL+L+P ++SPGDYIC+KG+ + A
Sbjct: 465 INVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAV 524
Query: 496 VRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNR 555
V G + VLS + I++ ++ K GNR
Sbjct: 525 VADDGITQFVVLSDGSYFG-------------EISILNIKGSK-------------AGNR 558
Query: 556 RTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 600
RTA+++S+GYSDLF LSK D+ + L EYP A+ LE + L K
Sbjct: 559 RTANIKSIGYSDLFCLSKDDLMEALTEYPDAKGMLEEKGKQILMK 603
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM-GTAGTNLIQECEDH 665
+KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+ G+ N
Sbjct: 506 KKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKS 565
Query: 666 ISIRFRFCKAKS 677
I FC +K
Sbjct: 566 IGYSDLFCLSKD 577
>sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2
SV=1
Length = 682
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 291/518 (56%), Gaps = 79/518 (15%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
FV + YYW ++LA LYN+ +++ R F ++ E+ +W LDY+ D++Y++D
Sbjct: 129 FVVSQSDDIYYYWLFFIALASLYNWIMLVARACFDQLQDENFFLWVGLDYLCDVIYILDT 188
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLFRLV 208
I RTGYLE G+L D KLRD+Y+ + F +D L +LP + L+ G+ LR RL+
Sbjct: 189 CIRLRTGYLEQGLLVKDLAKLRDNYIRTLQFKLDFLSILPTELLFFVTGYVPQLRFNRLL 248
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
+ R + F DRTE TNYPN FR +LI Y+LVI HWN C+Y+ I K G S WVY
Sbjct: 249 RFSRMFEFFDRTETRTNYPNAFRICNLILYILVIIHWNACIYYAISKALGLSSDTWVYSG 308
Query: 269 SDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANI 328
+ T + Y+ +YW TL LTTIG++P P EY FV+ L G+L+FAT++G+V ++
Sbjct: 309 QNKT-LSFCYVYCFYWSTLTLTTIGEMPPPVKDEEYVFVVFDFLVGVLIFATIVGNVGSM 367
Query: 329 VTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPG 388
+ +++A R EFQ ++D +K YM R+V L+ +VIKWFDYLW +K DE++ +
Sbjct: 368 IANMNATRAEFQTRIDAIKHYMHFRKVNRTLETRVIKWFDYLWTNKKTVDEQEVL----- 422
Query: 389 PGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINV 448
K +PDKL+AEIAINV
Sbjct: 423 ---------------------------------------------KNLPDKLRAEIAINV 437
Query: 449 HLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLS 508
HLDTLK+V IFQ+ EAG L ELVL+LRP ++SPGDYICRKG+ +G +++++
Sbjct: 438 HLDTLKKVRIFQDCEAGLLVELVLKLRPQVYSPGDYICRKGD--------IG-KEMYIIK 488
Query: 509 KTDMWDVLKEYPAARVRLES------IAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRS 562
+ + V + L + I++ +Q K GNRRTA++RS
Sbjct: 489 EGQLAVVADDGVTQFALLTAGGCFGEISILNIQGSKM-------------GNRRTANIRS 535
Query: 563 VGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 600
+GYSDLF LSK D+ + + EYP A+ LE + L+K
Sbjct: 536 IGYSDLFCLSKDDLMEAVAEYPDAQKVLEERGREILRK 573
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
KG++GKEMYI+ G+L VVAD+G T A L AG FGEISILN+
Sbjct: 477 KGDIGKEMYIIKEGQLAVVADDGVTQFALLTAGGCFGEISILNI 520
>sp|Q03041|CNGA2_BOVIN Cyclic nucleotide-gated olfactory channel OS=Bos taurus GN=CNGA2
PE=1 SV=1
Length = 663
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 317/555 (57%), Gaps = 84/555 (15%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
FV DPAG + Y W +++L LYN+ +++ R F ++ + ++W LDY++D++Y+ D+
Sbjct: 131 FVLDPAGDWYYRWLFLIALPVLYNWCLLVARACFSDLQKGYYIVWLVLDYVSDVVYIADL 190
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGF-NSILRLFRL 207
I RTG+LE G+L D+ KLRD+Y+++ F +D ++P D +Y ++G N +R RL
Sbjct: 191 FIRLRTGFLEQGLLVKDTKKLRDNYIHTMQFKLDVASIIPTDLIYFAVGIHNPEVRFNRL 250
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVY- 266
+ R + F DRTE T+YPN+FR S+LI Y+L+I HWN C+Y+ I K+ GFG WVY
Sbjct: 251 LHFARMFEFFDRTETRTSYPNIFRISNLILYILIIIHWNACIYYAISKSIGFGVDTWVYP 310
Query: 267 --GDSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
D + + ++Y+ YW TL LTTIG+ P P EY FVI L G+L+FAT++G+
Sbjct: 311 NITDPEYGYLSREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 370
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
V +++++++A R EFQAK+D VK YM+ R+V ++ KVI+WFDYLW +K DE + +
Sbjct: 371 VGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKEMEAKVIRWFDYLWTNKKSVDEREVL- 429
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
K +P KL+AEI
Sbjct: 430 -------------------------------------------------KNLPAKLRAEI 440
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDL 504
AINVHL TLK+V IFQ+ EAG L ELVL+LRP +FSPGDYICRKG+ +G ++
Sbjct: 441 AINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGD--------IG-KEM 491
Query: 505 FVLSKTDMW----DVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTA 558
+++ + + D + +Y +A I++ ++ K GNRRTA
Sbjct: 492 YIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKM-------------GNRRTA 538
Query: 559 SVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGEVGKEMYIV 618
++RS+GYSDLF LSK D+ + + EYP A+ LE + L K L++ EV M +
Sbjct: 539 NIRSLGYSDLFCLSKDDLMEAVTEYPDAKRVLEERGREILM--KEGLLDENEVAASMEVD 596
Query: 619 NRGRLQVVADNGKTV 633
+ +L+ + N T+
Sbjct: 597 VQEKLEQLETNMDTL 611
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM 651
KG++GKEMYI+ G+L VVAD+G T A L AGS FGEISILN+
Sbjct: 484 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNI 527
>sp|P29973|CNGA1_HUMAN cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1
SV=3
Length = 690
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/566 (36%), Positives = 303/566 (53%), Gaps = 110/566 (19%)
Query: 90 VFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL 149
V DP+G Y W ++L +YN+ ++I R F E+ + L W LDY++D++Y+ID+
Sbjct: 157 VIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWLILDYVSDIVYLIDMF 216
Query: 150 IHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRLV 208
+ RTGYLE G+L + KL + Y ++ F +D L L+P D LY +G+N +RL RL+
Sbjct: 217 VRTRTGYLEQGLLVKEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLL 276
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
+ R + F RTE TNYPN+FR S+L+ Y+++I HWN C+++ I K GFG+ WVY D
Sbjct: 277 RFSRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPD 336
Query: 269 SDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHV 325
+ + + ++Y+ S YW TL LTTIG+ P P EY FV+V L G+L+FAT++G++
Sbjct: 337 INDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGNI 396
Query: 326 ANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSC 385
+++++++AAR EFQA++D +K YM R V ++ +VIKWFDYLW +K DE++ +
Sbjct: 397 GSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKY 456
Query: 386 LPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIA 445
LP DKL+AEIA
Sbjct: 457 LP--------------------------------------------------DKLRAEIA 466
Query: 446 INVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRK----------------- 488
INVHLDTLK+V IF + EAG L ELVL+L+P ++SPGDYIC+K
Sbjct: 467 INVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAV 526
Query: 489 -------------------------------GNRRTASVRSVGYSDLFVLSKTDMWDVLK 517
GNRRTA+++S+GYSDLF LSK D+ + L
Sbjct: 527 VADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALT 586
Query: 518 EYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMW 577
EYP A+ LE + L K L + S P + R G DL +T
Sbjct: 587 EYPDAKTMLEEKGKQILMKDGLLDLNIANAGSD-PKDLEEKVTRMEGSVDLL---QTRFA 642
Query: 578 DVLKEYPAARVRLESIAVKRLQKYKR 603
+L EY + + +L+ +RL K ++
Sbjct: 643 RILAEYESMQQKLK----QRLTKVEK 664
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM-GTAGTNLIQECEDH 665
+KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+ G+ N
Sbjct: 508 KKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKS 567
Query: 666 ISIRFRFCKAKS 677
I FC +K
Sbjct: 568 IGYSDLFCLSKD 579
>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2
SV=1
Length = 691
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/567 (36%), Positives = 302/567 (53%), Gaps = 110/567 (19%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDI 148
V DPAG Y W ++L +YN+ ++I R F E+ + L W DY++D++Y++D+
Sbjct: 155 MVIDPAGNMYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWIIFDYLSDIVYLLDM 214
Query: 149 LIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRL 207
+ RTGYLE G+L + KL + Y ++ F +D L ++P D LY +G+N +RL RL
Sbjct: 215 FVRTRTGYLEQGLLVREEAKLIEKYKSNLQFKLDFLSVIPTDLLYFKLGWNYPEIRLNRL 274
Query: 208 VKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYG 267
++I R + F RTE TNYPN+FR S+L+ Y+++I HWN C+Y I K GFG+ WVY
Sbjct: 275 LRISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYFSISKAIGFGNDTWVYP 334
Query: 268 DSDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGH 324
D + + + ++Y+ S YW TL LTTIG+ P P EY FV+V L G+L+FAT++G+
Sbjct: 335 DVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGN 394
Query: 325 VANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVS 384
+ +++++++AAR EFQA++D +K YM R V ++ +VIKWFDYLW +K DE++ +
Sbjct: 395 IGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLK 454
Query: 385 CLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEI 444
LP DKL+AEI
Sbjct: 455 YLP--------------------------------------------------DKLRAEI 464
Query: 445 AINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRK---------------- 488
AINVHLDTLK+V IF + EAG L ELVL+L+P ++SPGDYIC+K
Sbjct: 465 AINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLA 524
Query: 489 --------------------------------GNRRTASVRSVGYSDLFVLSKTDMWDVL 516
GNRRTA+++S+GYSDLF LSK D+ + L
Sbjct: 525 VVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEAL 584
Query: 517 KEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDM 576
EYP A+ LE + L K + + S P + R G DL +T
Sbjct: 585 TEYPDAKTMLEEKGKQILMKDGLLDINIANAGSD-PKDLEEKVTRMEGSVDLL---QTRF 640
Query: 577 WDVLKEYPAARVRLESIAVKRLQKYKR 603
+L EY + + +L+ +RL K +R
Sbjct: 641 ARILAEYESMQQKLK----QRLTKVER 663
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM-GTAGTN 657
+KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+ G+ N
Sbjct: 507 KKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGN 558
>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2
SV=2
Length = 684
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 205/566 (36%), Positives = 299/566 (52%), Gaps = 110/566 (19%)
Query: 90 VFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL 149
V DP+G Y W ++L +YN+ +II R F E+ + L W DY++D++Y+ D+
Sbjct: 149 VIDPSGNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLIFDYVSDVVYLADMF 208
Query: 150 IHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRLV 208
+ RTGYLE G+L D KL + Y + F +D L ++P D LY+ G+N +RL RL+
Sbjct: 209 VRTRTGYLEQGLLVKDRMKLIEKYKANLQFKLDVLSVIPTDLLYIKFGWNYPEIRLNRLL 268
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
+I R + F RTE TNYPN+FR S+L+ Y+++I HWN C+Y+ I K GFG+ WVY D
Sbjct: 269 RISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGNDTWVYPD 328
Query: 269 SDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHV 325
+ + + ++Y+ S YW TL LTTIG+ P P EY FV+V L G+L+FAT++G++
Sbjct: 329 VNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVLDSEYIFVVVDFLIGVLIFATIVGNI 388
Query: 326 ANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSC 385
+++++++AAR EFQ+++D +K YM R V ++ +VIKWFDYLW +K DE + +
Sbjct: 389 GSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLRY 448
Query: 386 LPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIA 445
LP DKL+AEIA
Sbjct: 449 LP--------------------------------------------------DKLRAEIA 458
Query: 446 INVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRK----------------- 488
INVHLDTLK+V IF + EAG L ELVL+L+P ++SPGDYIC+K
Sbjct: 459 INVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAV 518
Query: 489 -------------------------------GNRRTASVRSVGYSDLFVLSKTDMWDVLK 517
GNRRTA+++S+GYSDLF LSK D+ + L
Sbjct: 519 VADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALT 578
Query: 518 EYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMW 577
EYP A+ LE + L K + S P + R G DL +T
Sbjct: 579 EYPDAKTMLEEKGRQILMKDGLLDINIANMGSD-PKDLEEKVTRMEGSVDLL---QTRFA 634
Query: 578 DVLKEYPAARVRLESIAVKRLQKYKR 603
+L EY + + +L+ +RL K ++
Sbjct: 635 RILAEYESMQQKLK----QRLTKVEK 656
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM-GTAGTNLIQECEDH 665
+KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+ G+ N
Sbjct: 500 KKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKS 559
Query: 666 ISIRFRFCKAKS 677
I FC +K
Sbjct: 560 IGYSDLFCLSKD 571
>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1
PE=2 SV=1
Length = 683
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/566 (36%), Positives = 298/566 (52%), Gaps = 110/566 (19%)
Query: 90 VFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL 149
V DP+G Y W ++L +YN+ +II R F E+ + L W DY++D++Y+ D+
Sbjct: 148 VIDPSGNMYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLIFDYVSDVVYLADMF 207
Query: 150 IHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRLV 208
+ RTGYLE G+L D KL + Y + F +D L ++P D LY G+N +RL RL+
Sbjct: 208 VRTRTGYLEQGLLVKDELKLIEKYKANLQFKLDVLSVIPTDLLYFKFGWNYPEIRLNRLL 267
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
+I R + F RTE TNYPN+FR S+L+ Y+++I HWN C+Y+ I K GFG+ WVY D
Sbjct: 268 RISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGNDTWVYPD 327
Query: 269 SDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHV 325
+ + + ++Y+ S YW TL LTTIG+ P P EY FV+V L G+L+FAT++G++
Sbjct: 328 VNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVLDSEYVFVVVDFLIGVLIFATIVGNI 387
Query: 326 ANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSC 385
+++++++AAR EFQ+++D +K YM R V ++ +VIKWFDYLW +K DE + +
Sbjct: 388 GSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLRY 447
Query: 386 LPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIA 445
LP DKL+AEIA
Sbjct: 448 LP--------------------------------------------------DKLRAEIA 457
Query: 446 INVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRK----------------- 488
INVHLDTLK+V IF + EAG L ELVL+L+P ++SPGDYIC+K
Sbjct: 458 INVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAV 517
Query: 489 -------------------------------GNRRTASVRSVGYSDLFVLSKTDMWDVLK 517
GNRRTA+++S+GYSDLF LSK D+ + L
Sbjct: 518 VADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALT 577
Query: 518 EYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMW 577
EYP A+ LE + L K + S P + R G DL +T
Sbjct: 578 EYPDAKTMLEEKGRQILMKDGLLDINIANLGSD-PKDLEEKVTRMEGSVDLL---QTRFA 633
Query: 578 DVLKEYPAARVRLESIAVKRLQKYKR 603
+L EY + + +L+ +RL K ++
Sbjct: 634 RILAEYESMQQKLK----QRLTKVEK 655
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNM-GTAGTNLIQECEDH 665
+KG++G+EMYI+ G+L VVAD+G T L GSYFGEISILN+ G+ N
Sbjct: 499 KKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKS 558
Query: 666 ISIRFRFCKAKS 677
I FC +K
Sbjct: 559 IGYSDLFCLSKD 570
>sp|Q24278|CNG_DROME Cyclic nucleotide-gated cation channel OS=Drosophila melanogaster
GN=Cng PE=2 SV=2
Length = 665
Score = 359 bits (921), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 284/528 (53%), Gaps = 92/528 (17%)
Query: 92 DPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDILIH 151
DP + Y W IVSLA LYN ++ R F EIN+ + W+ LDY+ D +Y++D L+H
Sbjct: 101 DPTLQSHYRWLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTLVH 160
Query: 152 FRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLY----------LSIGFNSI 201
G+L+ G+L D+ +LR HY ++ +Y+D L +LP D Y L + I
Sbjct: 161 MHEGFLDQGLLVRDAFRLRRHYFHTKGWYLDVLSMLPTDLAYIWWPPETCSSLYLPCPVI 220
Query: 202 LRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGS 261
+RL RL++I R W + DRTE T YPN FR ++ +LV+ HWN C+Y I GF S
Sbjct: 221 VRLNRLLRINRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSS 280
Query: 262 RNWVYGDSDTTD--VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFA 319
+WVY + T + + +QY+ S+YW TL LTTIG+ P P + EY FV+ L G+L+FA
Sbjct: 281 DSWVYNLNGTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDVEYLFVVADFLAGVLIFA 340
Query: 320 TVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDE 379
T++G++ +++++++ AR EFQ ++DGVK YM RRV + L+ +VI+WF Y W DE
Sbjct: 341 TIVGNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGALDE 400
Query: 380 EKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDK 439
E+ ++ L PDK
Sbjct: 401 ERVLAAL--------------------------------------------------PDK 410
Query: 440 LKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNR-------R 492
LKAEIAI VH+DTLK+V IF +TE G L LVL+L+ +FSPGDYICRKG+ +
Sbjct: 411 LKAEIAIQVHMDTLKQVRIFHDTEPGLLEALVLKLKLQVFSPGDYICRKGDVGKEMYIVK 470
Query: 493 TASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFP 552
+ VG + VL+ V E V + IA R
Sbjct: 471 RGKLSVVGDDGITVLATLGAGSVFGE-----VSVLEIAGNR------------------T 507
Query: 553 GNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 600
GNRRTA+VRS+GYSDLF L+K D+W+ L +YP AR L + L+K
Sbjct: 508 GNRRTANVRSLGYSDLFCLAKRDLWETLSDYPEARSTLTQRGCQLLRK 555
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 608 KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
KG+VGKEMYIV RG+L VV D+G TVLATL AGS FGE+S+L +
Sbjct: 459 KGDVGKEMYIVKRGKLSVVGDDGITVLATLGAGSVFGEVSVLEIA 503
>sp|Q03611|CNG_CAEEL Cyclic nucleotide-gated cation channel OS=Caenorhabditis elegans
GN=tax-4 PE=2 SV=3
Length = 733
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 302/574 (52%), Gaps = 128/574 (22%)
Query: 89 FVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEI---NRESL--------------- 130
+ DP+ YYW+ +V++A++YN +I R F ++ + +SL
Sbjct: 112 YTQDPSTDNFYYWTCVVTVAYIYNLLFVIARQVFNDLIGPSSQSLCRFYNGTLNSTTQVE 171
Query: 131 ------------------------------VIWFCLDYMADLMYVIDILIHFRTGYLEDG 160
++W D + D +Y+ID +++R GY++ G
Sbjct: 172 CTYNMLTNMKEMPTYSQYPDLGWSKYWHFRMLWVFFDLLMDCVYLIDTFLNYRMGYMDQG 231
Query: 161 VLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFL------YLSIGFNSILRLFRLVKIYRFW 214
++ ++ K+ Y S + ID + L+PLD++ Y++ ILRL RL++ R
Sbjct: 232 LVVREAEKVTKAYWQSKQYRIDGISLIPLDYILGWPIPYINWRGLPILRLNRLIRYKRVR 291
Query: 215 AFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYG------- 267
++RTE ++ PN FR ++ Y+++I HWN CLY I + G G+ WVYG
Sbjct: 292 NCLERTETRSSMPNAFRVVVVVWYIVIIIHWNACLYFWISEWIGLGTDAWVYGHLNKQSL 351
Query: 268 -DSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVA 326
D T ++++Y+ S+YW TL LTTIG++P P EY FV + L+ G+L+FAT++G+V
Sbjct: 352 PDDITDTLLRRYVYSFYWSTLILTTIGEVPSPVRNIEYAFVTLDLMCGVLIFATIVGNVG 411
Query: 327 NIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCL 386
++++++SAAR EFQ K+DG+K YM +R+V L+++VIKWFDYLW ++ +++ +
Sbjct: 412 SMISNMSAARTEFQNKMDGIKQYMELRKVSKQLEIRVIKWFDYLWTNKQSLSDQQVL--- 468
Query: 387 PGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAI 446
KV+PDKL+AEIA+
Sbjct: 469 -----------------------------------------------KVLPDKLQAEIAM 481
Query: 447 NVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDLFV 506
VH +TL++V IFQ+ EAG L ELVL+L+ +FSPGD+IC+KG+ +G ++++
Sbjct: 482 QVHFETLRKVRIFQDCEAGLLAELVLKLQLQVFSPGDFICKKGD--------IG-REMYI 532
Query: 507 LSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYS 566
+ + + V + V L+ +V K GNRRTA+VRSVGY+
Sbjct: 533 VKRGRLQVVDDDGKKVFVTLQEGSVFGELSILNIAGSKN-------GNRRTANVRSVGYT 585
Query: 567 DLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 600
DLFVLSKTD+W+ L+EYP AR L + + L+K
Sbjct: 586 DLFVLSKTDLWNALREYPDARKLLLAKGREILKK 619
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 607 EKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+KG++G+EMYIV RGRLQVV D+GK V TL+ GS FGE+SILN+
Sbjct: 522 KKGDIGREMYIVKRGRLQVVDDDGKKVFVTLQEGSVFGELSILNIA 567
>sp|Q8IV77|CNGA4_HUMAN Cyclic nucleotide-gated cation channel alpha-4 OS=Homo sapiens
GN=CNGA4 PE=1 SV=3
Length = 575
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 301/571 (52%), Gaps = 85/571 (14%)
Query: 82 SSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMAD 141
S L V DP+G + Y+W + +YN +++ R F ++ LV W LDY +D
Sbjct: 18 SKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSD 77
Query: 142 LMYVIDILIHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNS- 200
L+Y++D+++ F TG+LE G+L D ++ Y+ + +F++D L+P D +Y+ +G ++
Sbjct: 78 LLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTP 137
Query: 201 ILRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFG 260
LRL R ++ R + DRTE T YPN FR + L+ Y+ V+ HWN CLY + + GFG
Sbjct: 138 TLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFG 197
Query: 261 SRNWVYGDSDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLL 317
WVY D + +QYL S+Y+ TL LTT+GD P P + EY F++ L ++
Sbjct: 198 RDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMVGDFLLAVMG 257
Query: 318 FATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCS 377
FAT++G +++++ +++ A F VK YM+++ V L+ +VI W+ +L + +K +
Sbjct: 258 FATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMT 317
Query: 378 DEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVP 437
+E +AI+ + +P
Sbjct: 318 NE---------------------------VAILQH-----------------------LP 327
Query: 438 DKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVR 497
++L+AE+A++VHL TL RV+IFQN EA L ELVL+L+P +SPG+Y+CRKG+
Sbjct: 328 ERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGD------- 380
Query: 498 SVGYSDLFVLSKTDMW----DVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPF 551
+G +++++ + + D + +Y A + I++ ++
Sbjct: 381 -IG-QEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIK-------------GNM 425
Query: 552 PGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPL--EKG 609
GNRRTA+++S+GYSDLF LSK D+ +VL EYP A+ +E + L K + + E
Sbjct: 426 SGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAA 485
Query: 610 EVGKEMYIVNRGR-LQVVADNGKTVLATLRA 639
E+ + +R R L D+ +T A L A
Sbjct: 486 EIALQEATESRLRGLDQQLDDLQTKFARLLA 516
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 590 LESIAVKRLQKYKRTPLE----KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGE 645
LE + +K LQ +P E KG++G+EMYI+ G+L VVAD+G T A L AG YFGE
Sbjct: 357 LEELVLK-LQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGE 415
Query: 646 ISILNM 651
ISI+N+
Sbjct: 416 ISIINI 421
>sp|Q3UW12|CNGA4_MOUSE Cyclic nucleotide-gated cation channel alpha-4 OS=Mus musculus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 279/522 (53%), Gaps = 78/522 (14%)
Query: 90 VFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL 149
V DP+G + Y+W + +YN +++ R F ++ LV WF LDY +DL+Y++DI
Sbjct: 26 VLDPSGDYYYWWLNTMVFPIMYNLIIVVCRACFPDLQHSYLVAWFVLDYTSDLLYLLDIG 85
Query: 150 IHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRLV 208
+ F TG+LE G+L D + + Y+ + +F +D L+P D Y+ +G + LRL R +
Sbjct: 86 VRFHTGFLEQGILVVDKSMIASRYVRTWSFLLDLASLVPTDAAYVQLGPHIPTLRLNRFL 145
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
++ R + DRTE T YPN FR + L+ Y+ V+ HWN CLY + + GFG WVY D
Sbjct: 146 RVPRLFEAFDRTETRTAYPNAFRIAKLMIYIFVVIHWNSCLYFALSRYLGFGRDAWVYPD 205
Query: 269 SDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHV 325
+ +QYL S+Y+ TL LTT+GD P P + EY F++ L ++ FAT++G +
Sbjct: 206 PAQPGFERLRRQYLYSFYFSTLILTTVGDTPLPAREEEYLFMVGDFLLAVMGFATIMGSM 265
Query: 326 ANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSC 385
++++ +++ A F VK YM+++ V L+ +VI W+ +L + +K ++E
Sbjct: 266 SSVIYNMNTADAAFYPDHALVKKYMKLQHVNRRLERRVIDWYQHLQINKKMTNE------ 319
Query: 386 LPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIA 445
+AI+ + +P++L+AE+A
Sbjct: 320 ---------------------VAILQH-----------------------LPERLRAEVA 335
Query: 446 INVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGN--RRTASVRSVGYSD 503
++VHL TL RV+IFQN EA L ELVL+L+P +SPG+Y+CRKG+ R +R
Sbjct: 336 VSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYIIRE---GQ 392
Query: 504 LFVLSKTDMWDVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVR 561
L V++ D + +Y A + I++ ++ GNRRTA+++
Sbjct: 393 LAVVAD----DGVTQYAVLGAGLYFGEISIINIK-------------GNMSGNRRTANIK 435
Query: 562 SVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKR 603
S+GYSDLF LSK D+ +VL EYP A+ +E + L K +
Sbjct: 436 SLGYSDLFCLSKEDLREVLSEYPQAQAVMEEKGREILLKMNK 477
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 590 LESIAVKRLQKYKRTPLE----KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGE 645
LE + +K LQ +P E KG++G+EMYI+ G+L VVAD+G T A L AG YFGE
Sbjct: 357 LEELVLK-LQPQTYSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYAVLGAGLYFGE 415
Query: 646 ISILNM 651
ISI+N+
Sbjct: 416 ISIINI 421
>sp|Q64359|CNGA4_RAT Cyclic nucleotide-gated cation channel alpha-4 OS=Rattus norvegicus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 278/522 (53%), Gaps = 78/522 (14%)
Query: 90 VFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL 149
V DP+G + Y+W + +YN +++ R F ++ LV WF LDY +DL+Y++DI
Sbjct: 26 VLDPSGDYYYWWLNTMVFPIMYNLIIVVCRACFPDLQHSYLVAWFVLDYTSDLLYLLDIG 85
Query: 150 IHFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-SILRLFRLV 208
+ F TG+LE G+L D + Y+ + +F +D L+P D Y+ +G + LRL R +
Sbjct: 86 VRFHTGFLEQGILVVDKGMIASRYVRTWSFLLDLASLVPTDAAYVQLGPHIPTLRLNRFL 145
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
++ R + DRTE T YPN FR + L+ Y+ V+ HWN CLY + + GFG WVY D
Sbjct: 146 RVPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPD 205
Query: 269 SDTTD---VVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHV 325
+ +QYL S+Y+ TL LTT+GD P P + EY F++ L ++ FAT++G +
Sbjct: 206 PAQPGFERLRRQYLYSFYFSTLILTTVGDTPLPDREEEYLFMVGDFLLAVMGFATIMGSM 265
Query: 326 ANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSC 385
++++ +++ A F VK YM+++ V L+ +VI W+ +L + +K ++E
Sbjct: 266 SSVIYNMNTADAAFYPDHALVKKYMKLQHVNKRLERRVIDWYQHLQINKKMTNE------ 319
Query: 386 LPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIA 445
+AI+ + +P++L+AE+A
Sbjct: 320 ---------------------VAILQH-----------------------LPERLRAEVA 335
Query: 446 INVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGN--RRTASVRSVGYSD 503
++VHL TL RV+IFQN EA L ELVL+L+P +SPG+Y+CRKG+ R +R
Sbjct: 336 VSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGREMYIIRE---GQ 392
Query: 504 LFVLSKTDMWDVLKEYP--AARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVR 561
L V++ D + +Y A + I++ ++ GNRRTA+++
Sbjct: 393 LAVVAD----DGVTQYAVLGAGLYFGEISIINIK-------------GNMSGNRRTANIK 435
Query: 562 SVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKR 603
S+GYSDLF LSK D+ +VL EYP A+ +E + L K +
Sbjct: 436 SLGYSDLFCLSKEDLREVLSEYPQAQAVMEEKGREILLKMNK 477
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 590 LESIAVKRLQKYKRTPLE----KGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGE 645
LE + +K LQ +P E KG++G+EMYI+ G+L VVAD+G T A L AG YFGE
Sbjct: 357 LEELVLK-LQPQTYSPGEYVCRKGDIGREMYIIREGQLAVVADDGVTQYAVLGAGLYFGE 415
Query: 646 ISILNM 651
ISI+N+
Sbjct: 416 ISIINI 421
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1 OS=Bos taurus GN=CNGB1
PE=1 SV=1
Length = 1394
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 153/537 (28%), Positives = 255/537 (47%), Gaps = 92/537 (17%)
Query: 78 RYPRSSGP--NLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFC 135
++P+S P NL ++ W V LA+ +N W+I R+AF +++ +W
Sbjct: 757 QFPQSIDPLTNLMYIL---------WLFFVVLAWNWNCWLIPVRWAFPYQTPDNIHLWLL 807
Query: 136 LDYMADLMYVIDILI-HFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYL 194
+DY+ DL+Y++DI + R ++ G + TD ++R++Y+ S F +D LCLLPLD LYL
Sbjct: 808 MDYLCDLIYLLDITVFQMRLQFVRGGDIITDKKEMRNNYVKSQRFKMDMLCLLPLDLLYL 867
Query: 195 SIGFNSILRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIY 254
G N +LRL R +K F+ F +R E + ++R YLL H N CLY+
Sbjct: 868 KFGVNPLLRLPRCLKYMAFFEFNNRLESILSKAYVYRVIRTTAYLLYSLHLNSCLYYWAS 927
Query: 255 KNDGFGSRNWVYGDSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFG 314
+G GS +WVY V Y++ YYW L TIG LP PR+ E F + G
Sbjct: 928 AYEGLGSTHWVY-----DGVGNSYIRCYYWAVKTLITIGGLPDPRTLFEIVFQGLNYFTG 982
Query: 315 LLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQ 374
+ F+ ++G + ++V + +A + +++ +D YM ++P ++Q +V W++Y W +Q
Sbjct: 983 VFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWHSQ 1042
Query: 375 KCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPK 434
DE + + L
Sbjct: 1043 GMLDESELMVQL------------------------------------------------ 1054
Query: 435 VVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGN-RRT 493
PDK++ ++AI+V+ + +V +FQ + + +++ RLR V++ P DY+C+KG R
Sbjct: 1055 --PDKMRLDLAIDVNYSIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGRE 1112
Query: 494 ASVRSVGYSDLFVLSKTDMWDVLKEYPAARV--RLESIAVKRLQKYKRTPLEKGISPSPF 551
+ G + VL D VL A V + +AV
Sbjct: 1113 MYIIQAG--QVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGG------------------ 1152
Query: 552 PGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEK 608
GNRRTA+V + G+++LF+L K D+ ++L YP ++ L A +R+ + P EK
Sbjct: 1153 -GNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKA-RRMLRNNNKPKEK 1207
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 233/504 (46%), Gaps = 104/504 (20%)
Query: 91 FDPAGRFSY-YWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL 149
DP Y W V LA+ +N W+I R+AF +++ +W +DY+ DL+Y++DI
Sbjct: 762 IDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQTPDNIHLWLLMDYLCDLIYLLDIT 821
Query: 150 I-HFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLFRLV 208
+ R ++ G + TD ++R++Y+ S F +D LCLLPLD LYL G N +LRL R +
Sbjct: 822 VFQMRLQFVRGGDIITDKKEMRNNYVKSQRFKMDMLCLLPLDLLYLKFGVNPLLRLPRCL 881
Query: 209 KIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGD 268
K F+ F +R E + ++R YLL H N CLY+ +G GS +WVY
Sbjct: 882 KYMAFFEFNNRLESILSKAYVYRVIRTTAYLLYSLHLNSCLYYWASAYEGLGSTHWVY-- 939
Query: 269 SDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANI 328
V Y++ YYW L TIG LP PR+ E F + G+ F+ ++G + ++
Sbjct: 940 ---DGVGNSYIRCYYWAVKTLITIGGLPDPRTLFEIVFQGLNYFTGVFAFSVMIGQMRDV 996
Query: 329 VTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPG 388
V + +A + +++ +D YM ++P ++Q +V W++Y W +Q DE + + LP
Sbjct: 997 VGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWHSQGMLDESELMVQLP- 1055
Query: 389 PGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINV 448
DK++ ++AI+V
Sbjct: 1056 -------------------------------------------------DKMRLDLAIDV 1066
Query: 449 HLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRK-------------------- 488
+ + +V +FQ + + +++ RLR V++ P DY+C+K
Sbjct: 1067 NYSIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGG 1126
Query: 489 --------------------------GNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAA 522
GNRRTA+V + G+++LF+L K D+ ++L YP +
Sbjct: 1127 PDGKSVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPES 1186
Query: 523 RVRLESIAVKRLQKYKRTPLEKGI 546
+ L A +R+ + P EK +
Sbjct: 1187 QKLLRKKA-RRMLRNNNKPKEKSV 1209
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 607 EKGEVGKEMYIVNRGRLQVVA-DNGKTVLATLRAGSYFGEISILNMG 652
+KGE+G+EMYI+ G++QV+ +GK+VL TL+AGS FGEIS+L +G
Sbjct: 1105 KKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVG 1151
>sp|Q9JJZ9|CNGB3_MOUSE Cyclic nucleotide-gated cation channel beta-3 OS=Mus musculus
GN=Cngb3 PE=1 SV=1
Length = 694
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 228/493 (46%), Gaps = 74/493 (15%)
Query: 96 RFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL-IHFRT 154
R W ++V++A+ +N W++ R F ++ W D + D++Y+ DIL I R
Sbjct: 208 RVYLLWLLLVTIAYNWNCWLLPVRLVFPCQTPDNKNYWIITDIVCDIIYLCDILLIQPRL 267
Query: 155 GYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLFRLVKIYRFW 214
++ G + DS +L+ +Y +ST F +D LLP + LY+ G N I R R++K F+
Sbjct: 268 QFVRGGEIIVDSNELKRNYRSSTKFRMDVASLLPFEVLYIFFGVNPIFRANRILKYTSFF 327
Query: 215 AFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV 274
F E + ++R YLL + H N C+Y+ +G GS WVY
Sbjct: 328 EFNHHLESIMDKAYVYRVIRTTGYLLFLLHINACVYYWASDYEGIGSTKWVYNGEGN--- 384
Query: 275 VKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSA 334
+YL+ +YW L TIG LP P++ E F + G+ +F++++G + +++ + +A
Sbjct: 385 --KYLRCFYWAVRTLITIGGLPEPQTSFEIVFQFLNFFSGVFVFSSLIGQMRDVIGAATA 442
Query: 335 ARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSST 394
+ FQA +D + YM +P ++Q +V W +Y W +Q+ DE + LP
Sbjct: 443 NQNYFQACMDHIIAYMNKYSIPQSVQYRVRTWLEYTWNSQRILDESNLLENLP------- 495
Query: 395 KLVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLK 454
++ IA++++ +
Sbjct: 496 -------------------------------------------TAMQLSIALDINFSIID 512
Query: 455 RVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLSKTDMWD 514
+VE+F+ + + +L+LRL+ ++ PGD++C+KG + + + ++ VL D
Sbjct: 513 KVELFKGCDTQMIYDLLLRLKSTIYLPGDFVCKKG-EIGKEMYIIKHGEVQVLGGPDGAQ 571
Query: 515 VLKEYPAARVRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKT 574
VL A V E I++ L KG GNRRTA V + G+++L L K
Sbjct: 572 VLVTLKAGSVFGE-ISL----------LAKG------GGNRRTADVVAHGFANLLTLDKK 614
Query: 575 DMWDVLKEYPAAR 587
+ ++L YP ++
Sbjct: 615 TLQEILLHYPTSK 627
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 607 EKGEVGKEMYIVNRGRLQVV-ADNGKTVLATLRAGSYFGEISILNMG 652
+KGE+GKEMYI+ G +QV+ +G VL TL+AGS FGEIS+L G
Sbjct: 545 KKGEIGKEMYIIKHGEVQVLGGPDGAQVLVTLKAGSVFGEISLLAKG 591
>sp|Q8MJD7|CNGB3_CANFA Cyclic nucleotide-gated cation channel beta-3 OS=Canis familiaris
GN=CNGB3 PE=1 SV=1
Length = 782
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 234/510 (45%), Gaps = 78/510 (15%)
Query: 105 VSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVID-ILIHFRTGYLEDGVLQ 163
V++A+ +N W+I R F ++ WF D D++Y+ D +LI R +++ G +
Sbjct: 220 VTIAYNWNCWLIPLRLVFPYQTPDNTHYWFITDITCDIIYLCDMLLIQPRLQFIKGGDIM 279
Query: 164 TDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLFRLVKIYRFWAFMDRTERH 223
DS +L+ HY +ST F +D ++P D YL GFN + R+ R++K F+ F E
Sbjct: 280 VDSNELKRHYRSSTKFQLDVASVMPFDVFYLFFGFNPVFRMNRILKYTSFFEFNHHLESI 339
Query: 224 TNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDVVKQYLQSYY 283
+ ++R YLL H N C+Y+ +G GS WVY +YL+ YY
Sbjct: 340 MDKAYIYRVIRTTGYLLYTLHINACIYYWASDYEGIGSTKWVYNGEGN-----KYLRCYY 394
Query: 284 WCTLALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKL 343
W L TIG LP P++ E F ++ G+ +F++++G + +++ + +A + F+ +
Sbjct: 395 WAVRTLITIGGLPEPQTSFEIVFQLLNFFSGVFVFSSLIGQMQDVIGAATANQNNFRISM 454
Query: 344 DGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYE 403
D +YM +P +Q +V W++Y W +Q+ DE + LP
Sbjct: 455 DHTISYMNTYSIPKNVQNRVRTWYEYTWDSQRMLDESDLLCTLP---------------- 498
Query: 404 LEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTE 463
V +L + +N L + +VE+F+ +
Sbjct: 499 --------------------------------VTMQLALTVDVN--LSIISKVELFKGCD 524
Query: 464 AGFLCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAAR 523
+ +++LRL+ ++ PGD++C+KG + + ++ VL +D VL
Sbjct: 525 TQMIYDMLLRLKSTVYLPGDFVCKKG-EIGKEMYIIKQGEVQVLGGSDGAQVL------- 576
Query: 524 VRLESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEY 583
V L++ AV + L G GNRRTA+V + G+++L L K + ++L Y
Sbjct: 577 VTLKAGAV-----FGEISLLAGRG-----GNRRTANVIAHGFANLLTLDKKTLQEILVHY 626
Query: 584 PAARVRLESIAVKRLQK----YKRTPLEKG 609
P + L A L+K + TP KG
Sbjct: 627 PDSEKLLMKKASVLLKKKAPATETTPPRKG 656
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 607 EKGEVGKEMYIVNRGRLQVV-ADNGKTVLATLRAGSYFGEISIL 649
+KGE+GKEMYI+ +G +QV+ +G VL TL+AG+ FGEIS+L
Sbjct: 548 KKGEIGKEMYIIKQGEVQVLGGSDGAQVLVTLKAGAVFGEISLL 591
>sp|Q14028|CNGB1_HUMAN Cyclic nucleotide-gated cation channel beta-1 OS=Homo sapiens
GN=CNGB1 PE=1 SV=2
Length = 1251
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 257/547 (46%), Gaps = 94/547 (17%)
Query: 73 HRVAERY--PRSSGP--NLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRE 128
HR ++Y P+S P NL +V W V +A+ +N W+I R+AF +
Sbjct: 636 HRPWKKYQFPQSIDPLTNLMYVL---------WLFFVVMAWNWNCWLIPVRWAFPYQTPD 686
Query: 129 SLVIWFCLDYMADLMYVIDILI-HFRTGYLEDGVLQTDSTKLRDHYMNSTTFYIDCLCLL 187
++ W +DY+ DL+Y +DI + R ++ G + TD +R++Y+ S F +D L LL
Sbjct: 687 NIHHWLLMDYLCDLIYFLDITVFQTRLQFVRGGDIITDKKDMRNNYLKSRRFKMDLLSLL 746
Query: 188 PLDFLYLSIGFNSILRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNG 247
PLDFLYL +G N +LRL R +K F+ F R E + ++R YLL H N
Sbjct: 747 PLDFLYLKVGVNPLLRLPRCLKYMAFFEFNSRLESILSKAYVYRVIRTTAYLLYSLHLNS 806
Query: 248 CLYHIIYKNDGFGSRNWVYGDSDTTDVVKQYLQSYYWCTLALTTIGDLPRPRSKGEYFFV 307
CLY+ G GS +WVY V Y++ YY+ L TIG LP P++ E F
Sbjct: 807 CLYYWASAYQGLGSTHWVYDG-----VGNSYIRCYYFAVKTLITIGGLPDPKTLFEIVFQ 861
Query: 308 IVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWF 367
++ G+ F+ ++G + ++V + +A + +++ +D YM ++P ++Q +V W+
Sbjct: 862 LLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPKSVQNRVKTWY 921
Query: 368 DYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGPLY 427
+Y W +Q DE + + L
Sbjct: 922 EYTWHSQGMLDESELMVQL----------------------------------------- 940
Query: 428 MSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICR 487
PDK++ ++AI+V+ + + +V +FQ + + +++ RLR V++ P DY+C+
Sbjct: 941 ---------PDKMRLDLAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCK 991
Query: 488 KGN-RRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARV--RLESIAVKRLQKYKRTPLEK 544
KG R + G + VL D VL A V + +AV
Sbjct: 992 KGEIGREMYIIQAG--QVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGG----------- 1038
Query: 545 GISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRT 604
GNRRTA+V + G+++LF+L K D+ ++L YP ++ L A +R+ +
Sbjct: 1039 --------GNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKA-RRMLRSNNK 1089
Query: 605 PLEKGEV 611
P E+ V
Sbjct: 1090 PKEEKSV 1096
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 607 EKGEVGKEMYIVNRGRLQVVA-DNGKTVLATLRAGSYFGEISILNMG 652
+KGE+G+EMYI+ G++QV+ +GK+VL TL+AGS FGEIS+L +G
Sbjct: 991 KKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVG 1037
>sp|Q9NQW8|CNGB3_HUMAN Cyclic nucleotide-gated cation channel beta-3 OS=Homo sapiens
GN=CNGB3 PE=1 SV=2
Length = 809
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 229/497 (46%), Gaps = 75/497 (15%)
Query: 108 AFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDIL-IHFRTGYLEDGVLQTDS 166
A+ +N I R F +++ W D + D++Y+ D+L I R ++ G + DS
Sbjct: 228 AYNWNCCFIPLRLVFPYQTADNIHYWLIADIICDIIYLYDMLFIQPRLQFVRGGDIIVDS 287
Query: 167 TKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLFRLVKIYRFWAFMDRTERHTNY 226
+LR HY ST F +D ++P D YL GFN + R R++K F+ F E +
Sbjct: 288 NELRKHYRTSTKFQLDVASIIPFDICYLFFGFNPMFRANRMLKYTSFFEFNHHLESIMDK 347
Query: 227 PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDVVKQYLQSYYWCT 286
++R YLL I H N C+Y+ +G G+ WVY +YL+ YYW
Sbjct: 348 AYIYRVIRTTGYLLFILHINACVYYWASNYEGIGTTRWVYDGEGN-----EYLRCYYWAV 402
Query: 287 LALTTIGDLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGV 346
L TIG LP P++ E F ++ G+ +F++++G + +++ + +A + F+A +D
Sbjct: 403 RTLITIGGLPEPQTLFEIVFQLLNFFSGVFVFSSLIGQMRDVIGAATANQNYFRACMDDT 462
Query: 347 KTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEE 406
YM +P +Q +V W++Y W +Q+ DE + LP ++ +L
Sbjct: 463 IAYMNNYSIPKLVQKRVRTWYEYTWDSQRMLDESDLLKTLP----TTVQLA--------- 509
Query: 407 IAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGF 466
+AI+V+ + +V++F+ +
Sbjct: 510 -------------------------------------LAIDVNFSIISKVDLFKGCDTQM 532
Query: 467 LCELVLRLRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRL 526
+ +++LRL+ VL+ PGD++C+KG + + + ++ VL D VL A V
Sbjct: 533 IYDMLLRLKSVLYLPGDFVCKKG-EIGKEMYIIKHGEVQVLGGPDGTKVLVTLKAGSVFG 591
Query: 527 ESIAVKRLQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP-A 585
E I++ L G GNRRTA+V + G+++L L K + ++L YP +
Sbjct: 592 E-ISL----------LAAG------GGNRRTANVVAHGFANLLTLDKKTLQEILVHYPDS 634
Query: 586 ARVRLESIAVKRLQKYK 602
R+ ++ V QK K
Sbjct: 635 ERILMKKARVLLKQKAK 651
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 607 EKGEVGKEMYIVNRGRLQVV-ADNGKTVLATLRAGSYFGEISILNMG 652
+KGE+GKEMYI+ G +QV+ +G VL TL+AGS FGEIS+L G
Sbjct: 553 KKGEIGKEMYIIKHGEVQVLGGPDGTKVLVTLKAGSVFGEISLLAAG 599
>sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Rattus norvegicus GN=Hcn2
PE=2 SV=3
Length = 863
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 131/612 (21%), Positives = 250/612 (40%), Gaps = 142/612 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV R ER +S+G ++ P F +YW + L + N +I F
Sbjct: 157 GSQKAVEREQERV-KSAG---AWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FK 210
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D +++D++++FRTG +ED + D K++ Y+ T F +D +
Sbjct: 211 DETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLR-TWFVVDFV 269
Query: 185 CLLPLDFLYLSI--GFNS-ILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + G +S + + R ++I RF ++ + E H
Sbjct: 270 SSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 329
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDVVKQYLQS 281
Y + R +LI +L++ HW+GCL ++ F S WV ++V
Sbjct: 330 TYDLASAVMRICNLISMMLLLCHWDGCLQFLVPMLQDFPSDCWV----SINNMVNHSWSE 385
Query: 282 YYWCTL-----ALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAA 335
Y L + IG P S + + ++ ++ G +A +GH ++ S+ ++
Sbjct: 386 LYSFALFKAMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSS 445
Query: 336 RKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTK 395
R+++Q K V+ YM ++P + K+ ++++ + K DE+ + L GP
Sbjct: 446 RRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRY-QGKMFDEDSILGELNGP------ 498
Query: 396 LVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-K 454
L+ EI +N + L
Sbjct: 499 --------------------------------------------LREEI-VNFNCRKLVA 513
Query: 455 RVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKG------------------------- 489
+ +F N + F+ ++ +L+ +F PGDYI R+G
Sbjct: 514 SMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMK 573
Query: 490 ---------------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRL 534
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL
Sbjct: 574 LSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRL 633
Query: 535 QKYKRT------PLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARV 588
+ + ++ +S F N+ A ++ + D ++ + ++ + +P
Sbjct: 634 DRIGKKNSILLHKVQHDLSSGVF-NNQENAIIQEIVKYDREMVQQAELGQRVGFFPPPPP 692
Query: 589 RLESIAVKRLQK 600
R A+ LQ+
Sbjct: 693 RQVRSAIATLQQ 704
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G +GK+MY + G + V+ K + L GSYFGEI +L G
Sbjct: 545 IREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEICLLTRG 589
>sp|O88704|HCN1_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Mus musculus GN=Hcn1 PE=1
SV=1
Length = 910
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/538 (21%), Positives = 226/538 (42%), Gaps = 127/538 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV + ER +++G ++ P F +YW +I+ + + N +I F
Sbjct: 104 GSQKAVEKEQERV-KTAG---FWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FT 157
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTGYLEDGVLQT--DSTKLRDHYMNSTTFYIDCL 184
++ W + +D ++++D++++FRTG + + + D ++ +Y+ S F +D +
Sbjct: 158 EQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFI 216
Query: 185 CLLPLDFLYLSI--GFNS-ILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + G +S + + R ++I RF ++ + E H
Sbjct: 217 SSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 276
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV + D KQY
Sbjct: 277 TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSY 336
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P S + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 337 ALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQY 396
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P ++ K+ ++++ + K DEE +S L P
Sbjct: 397 QEKYKQVEQYMSFHKLPADMRQKIHDYYEHRY-QGKIFDEENILSELNDP---------- 445
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
L+ EI +N + L + +
Sbjct: 446 ----------------------------------------LREEI-VNFNCRKLVATMPL 464
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +LR +F PGDYI R+G
Sbjct: 465 FANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDG 524
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 536
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL +
Sbjct: 525 SYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDR 582
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G VGK+MY + G V+ + K + L GSYFGEI +L G
Sbjct: 492 IREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEICLLTKG 536
>sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Mus musculus GN=Hcn2 PE=1
SV=1
Length = 863
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/542 (22%), Positives = 223/542 (41%), Gaps = 135/542 (24%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV R ER +S+G ++ P F +YW + L + N +I F
Sbjct: 157 GSQKAVEREQERV-KSAG---AWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FK 210
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D +++D++++FRTG +ED + D K++ Y+ T F +D +
Sbjct: 211 DETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLR-TWFVVDFV 269
Query: 185 CLLPLDFLYLSI--GFNS-ILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + G +S + + R ++I RF ++ + E H
Sbjct: 270 SSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 329
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDVVKQYLQS 281
Y + R +LI +L++ HW+GCL ++ F S WV ++V
Sbjct: 330 TYDLASAVMRICNLISMMLLLCHWDGCLQFLVPMLQDFPSDCWV----SINNMVNHSWSE 385
Query: 282 YYWCTL-----ALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAA 335
Y L + IG P S + + ++ ++ G +A +GH ++ S+ ++
Sbjct: 386 LYSFALFKAMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSS 445
Query: 336 RKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTK 395
R+++Q K V+ YM ++P + K+ ++++ + K DE+ + L GP
Sbjct: 446 RRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRY-QGKMFDEDSILGELNGP------ 498
Query: 396 LVHGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-K 454
L+ EI +N + L
Sbjct: 499 --------------------------------------------LREEI-VNFNCRKLVA 513
Query: 455 RVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKG------------------------- 489
+ +F N + F+ ++ +L+ +F PGDYI R+G
Sbjct: 514 SMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMK 573
Query: 490 ---------------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRL 534
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL
Sbjct: 574 LSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRL 633
Query: 535 QK 536
+
Sbjct: 634 DR 635
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G +GK+MY + G + V+ K + L GSYFGEI +L G
Sbjct: 545 IREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEICLLTRG 589
>sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Rattus norvegicus GN=Hcn1
PE=2 SV=1
Length = 910
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/538 (21%), Positives = 226/538 (42%), Gaps = 127/538 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV + ER +++G ++ P F +YW +I+ + + N +I F
Sbjct: 104 GSQKAVEKEQERV-KTAG---FWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FT 157
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTGYLEDGVLQT--DSTKLRDHYMNSTTFYIDCL 184
++ W + +D ++++D++++FRTG + + + D ++ +Y+ S F +D +
Sbjct: 158 EQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFI 216
Query: 185 CLLPLDFLYLSI--GFNS-ILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + G +S + + R ++I RF ++ + E H
Sbjct: 217 SSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 276
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV + D KQY
Sbjct: 277 TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSY 336
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P S + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 337 ALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQY 396
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P ++ K+ ++++ + K DEE +S L P
Sbjct: 397 QEKYKQVEQYMSFHKLPADMRQKIHDYYEHRY-QGKIFDEENILSELNDP---------- 445
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
L+ EI +N + L + +
Sbjct: 446 ----------------------------------------LREEI-VNFNCRKLVATMPL 464
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +LR +F PGDYI R+G
Sbjct: 465 FANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDG 524
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 536
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL +
Sbjct: 525 SYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDR 582
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G VGK+MY + G V+ + K + L GSYFGEI +L G
Sbjct: 492 IREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEICLLTKG 536
>sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Homo sapiens GN=HCN1 PE=2
SV=3
Length = 890
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 226/538 (42%), Gaps = 127/538 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV + ER +++G ++ P F +YW +I+ + + N +I F
Sbjct: 115 GSQKAVEKEQERV-KTAG---FWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FT 168
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTGYLEDGVLQT--DSTKLRDHYMNSTTFYIDCL 184
++ W + +D ++++D++++FRTG + + + D ++ +Y+ S F +D +
Sbjct: 169 EQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFI 227
Query: 185 CLLPLDFLYLSI--GFNS-ILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + G +S + + R ++I RF ++ + E H
Sbjct: 228 SSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 287
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV + D KQY
Sbjct: 288 TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSY 347
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P S + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 348 ALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQY 407
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P ++ K+ ++++ + K DEE ++ L P
Sbjct: 408 QEKYKQVEQYMSFHKLPADMRQKIHDYYEHRY-QGKIFDEENILNELNDP---------- 456
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
L+ EI +N + L + +
Sbjct: 457 ----------------------------------------LREEI-VNFNCRKLVATMPL 475
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +LR +F PGDYI R+G
Sbjct: 476 FANADPNFVTAMLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKSSKEMKLTDG 535
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 536
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL +
Sbjct: 536 SYFGEICLLTKGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDR 593
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G VGK+MY + G V+ + K + L GSYFGEI +L G
Sbjct: 503 IREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEICLLTKG 547
>sp|Q9UL51|HCN2_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Homo sapiens GN=HCN2 PE=1
SV=3
Length = 889
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 222/538 (41%), Gaps = 127/538 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV R ER +S+G ++ P F +YW + L + N +I F
Sbjct: 184 GSQKAVEREQERV-KSAG---AWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FK 237
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D +++D++++FRTG +ED + D K++ Y+ T F +D +
Sbjct: 238 DETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLR-TWFVVDFV 296
Query: 185 CLLPLDFLYLSI--GFNS-ILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + G +S + + R ++I RF ++ + E H
Sbjct: 297 SSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 356
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDVVKQ-YLQ 280
Y + R +LI +L++ HW+GCL ++ F WV + + Y
Sbjct: 357 TYDLASAVMRICNLISMMLLLCHWDGCLQFLVPMLQDFPRNCWVSINGMVNHSWSELYSF 416
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P S + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 417 ALFKAMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY 476
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P + K+ ++++ + K DE+ + L GP
Sbjct: 477 QEKYKQVEQYMSFHKLPADFRQKIHDYYEHRY-QGKMFDEDSILGELNGP---------- 525
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
L+ EI +N + L + +
Sbjct: 526 ----------------------------------------LREEI-VNFNCRKLVASMPL 544
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +L+ +F PGDYI R+G
Sbjct: 545 FANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDG 604
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 536
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL +
Sbjct: 605 SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDR 662
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G +GK+MY + G + V+ K + L GSYFGEI +L G
Sbjct: 572 IREGTIGKKMYFIQHGVVSVLTKGNKEM--KLSDGSYFGEICLLTRG 616
>sp|Q9MZS1|HCN1_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Oryctolagus cuniculus
GN=HCN1 PE=2 SV=2
Length = 822
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 232/502 (46%), Gaps = 55/502 (10%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV + ER +++G ++ P F +YW +I+ + + N +I F
Sbjct: 51 GSQKAVEKEQERV-KTAG---FWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FT 104
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTGYLEDGVLQT--DSTKLRDHYMNSTTFYIDCL 184
++ W + +D ++++D++++FRTG + + + D ++ +Y+ S F +D +
Sbjct: 105 EQTTTPWIIFNVASDTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFI 163
Query: 185 CLLPLDFLYLSI--GFNS-ILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + G +S + + R ++I RF ++ + E H
Sbjct: 164 SSIPVDYIFLIVEKGMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 223
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV + D KQY
Sbjct: 224 TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSY 283
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P S + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 284 ALFKAMSHMLCIGYGAQAPVSMSDLWITMLSMIVGATCYAMFVGHATALIQSLDSSRRQY 343
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P ++ K+ ++++ + K DEE ++ L P ++V+
Sbjct: 344 QEKYKQVEQYMSFHKLPADMRQKIHDYYEHRY-QGKIFDEENILNELNDPLRE--EIVNF 400
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIF 459
+L + A PN V L P D + E A+ K++
Sbjct: 401 NCRKLVATMPLFANADPNFVTAMLSKLRFEVFQPG---DYIIREGAVG------KKMYFI 451
Query: 460 QNTEAGFLCELVLRLRPVLFSPGDY---IC--RKGNRRTASVRSVGYSDLFVLSKTDMWD 514
Q+ AG + + ++ + G Y IC KG RRTASVR+ Y L+ LS + +
Sbjct: 452 QHGVAGVITKSSKEMK---LTDGSYFGEICLLTKG-RRTASVRADTYCRLYSLSVDNFNE 507
Query: 515 VLKEYPAARVRLESIAVKRLQK 536
VL+EYP R E++A+ RL +
Sbjct: 508 VLEEYPMMRRAFETVAIDRLDR 529
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G VGK+MY + G V+ + K + L GSYFGEI +L G
Sbjct: 439 IREGAVGKKMYFIQHGVAGVITKSSKEM--KLTDGSYFGEICLLTKG 483
>sp|Q9Y3Q4|HCN4_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Homo sapiens GN=HCN4 PE=1
SV=1
Length = 1203
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 119/541 (21%), Positives = 224/541 (41%), Gaps = 127/541 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV R ER +S+G ++ P F +YW + + L + N +I F
Sbjct: 235 GSQKAVEREQERV-KSAG---FWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FK 288
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D ++ID++++FRTG +ED + D +++ Y+ S F +D +
Sbjct: 289 DENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFI 347
Query: 185 CLLPLDFLYLSIGF---NSILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + + + + R ++I RF ++ + E H
Sbjct: 348 SSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 407
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV ++ + KQY
Sbjct: 408 TYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSY 467
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 468 ALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY 527
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P + ++ ++++ + K DEE +
Sbjct: 528 QEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESILG--------------- 571
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
EL E L+ EI IN + L + +
Sbjct: 572 ---ELSE--------------------------------PLREEI-INFNCRKLVASMPL 595
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +LR +F PGDYI R+G
Sbjct: 596 FANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADG 655
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYK 538
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL +
Sbjct: 656 SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIG 715
Query: 539 R 539
+
Sbjct: 716 K 716
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G +GK+MY + G + V+ K L GSYFGEI +L G
Sbjct: 623 IREGTIGKKMYFIQHGVVSVLTKGNKET--KLADGSYFGEICLLTRG 667
>sp|Q9TV66|HCN4_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Oryctolagus cuniculus
GN=HCN4 PE=2 SV=1
Length = 1175
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/538 (22%), Positives = 223/538 (41%), Gaps = 127/538 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV R ER +S+G ++ P F +YW + + L + N +I F
Sbjct: 236 GSQKAVEREQERV-KSAG---FWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FK 289
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D ++ID++++FRTG +ED + D +++ Y+ S F +D +
Sbjct: 290 DENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTDIILDPRRIKMKYLKSW-FVVDFV 348
Query: 185 CLLPLDFLYLSIGF---NSILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + + + + R ++I RF ++ + E H
Sbjct: 349 SSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 408
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV ++ + KQY
Sbjct: 409 TYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSLNNMVNNSWGKQYSY 468
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 469 ALFKAMSHMLCIGYGRQAPMGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY 528
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P + ++ ++++ + K DEE +
Sbjct: 529 QEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESILG--------------- 572
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
EL E L+ EI IN + L + +
Sbjct: 573 ---ELSE--------------------------------PLREEI-INFNCRKLVASMPL 596
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +LR +F PGDYI R+G
Sbjct: 597 FANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADG 656
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 536
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL +
Sbjct: 657 SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDR 714
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G +GK+MY + G + V+ K L GSYFGEI +L G
Sbjct: 624 IREGTIGKKMYFIQHGVVSVLTKGNKET--KLADGSYFGEICLLTRG 668
>sp|Q9JKA7|HCN4_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Rattus norvegicus GN=Hcn4
PE=2 SV=1
Length = 1198
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/538 (22%), Positives = 222/538 (41%), Gaps = 127/538 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV R ER +S+G ++ P F +YW + + L + N +I F
Sbjct: 235 GSQKAVEREQERV-KSAG---FWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FK 288
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D ++ID++++FRTG +ED + D +++ Y+ S F +D +
Sbjct: 289 DENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FVVDFI 347
Query: 185 CLLPLDFLYLSIGF---NSILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+D+++L + + + + R ++I RF ++ + E H
Sbjct: 348 SSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 407
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV + + KQY
Sbjct: 408 TYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVSINGMVNNSWGKQYSY 467
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 468 ALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY 527
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P + ++ ++++ + K DEE +
Sbjct: 528 QEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESILG--------------- 571
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
EL E L+ EI IN + L + +
Sbjct: 572 ---ELSE--------------------------------PLREEI-INFNCRKLVASMPL 595
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +LR +F PGDYI R+G
Sbjct: 596 FANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADG 655
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQK 536
RRTASVR+ Y L+ LS + +VL+EYP R E++A+ RL +
Sbjct: 656 SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDR 713
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G +GK+MY + G + V+ K L GSYFGEI +L G
Sbjct: 623 IREGTIGKKMYFIQHGVVSVLTKGNKET--KLADGSYFGEICLLTRG 667
>sp|Q9ER47|KCNH7_MOUSE Potassium voltage-gated channel subfamily H member 7 OS=Mus
musculus GN=Kcnh7 PE=2 SV=2
Length = 1195
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 218/531 (41%), Gaps = 130/531 (24%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFC---------LDYMADLMYVID 147
F W ++ L +Y Y AF +RE C +D + D+M++ID
Sbjct: 406 FKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQKRRECGYSCSPLNVVDLIVDIMFIID 465
Query: 148 ILIHFRTGYL-EDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLS---------IG 197
ILI+FRT Y+ ++ + +D K+ HY F ID + +P D L IG
Sbjct: 466 ILINFRTTYVNQNEEVVSDPAKIAIHYFKGW-FLIDMVAAIPFDLLIFGSGSDETTTLIG 524
Query: 198 FNSILRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII 253
RL RLV++ R + +R++ Y ++++ L+ IF HW C+++ I
Sbjct: 525 LLKTARLLRLVRVAR------KLDRYSEY-----GAAVLMLLMCIFALIAHWLACIWYAI 573
Query: 254 ------YKNDGFGSRNWV----------YGDSDTTD---VVKQYLQSYYWCTLALTTIG- 293
Y D G W+ Y DSD++ + +Y+ + Y+ +LT++G
Sbjct: 574 GNVERPYLTDKIG---WLDSLGTQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSLTSVGF 630
Query: 294 DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMR 353
P + E F I +L G L++A++ G+V+ I+ + + + ++ VK ++R
Sbjct: 631 GNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKEFIRFH 690
Query: 354 RVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQ 413
++PN L+ ++ ++F + W +N
Sbjct: 691 QIPNPLRQRLEEYFQHAW-------------------------------------TYTNG 713
Query: 414 ATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLR 473
N V G P+ L+A+I ++++ L+ + F+ G L L ++
Sbjct: 714 IDMNMVLKG-------------FPECLQADICLHLNQTLLQNCKAFRGASKGCLRALAMK 760
Query: 474 LRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKR 533
+ PGD + G+ TA L+ LS+ + + + A + I +
Sbjct: 761 FKTTHAPPGDTLVHCGDVLTA---------LYFLSRGSIEILKDDIVVAILGKNDIFGEM 811
Query: 534 LQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP 584
+ Y + PG + A VR++ Y DL + + D+ +VL YP
Sbjct: 812 VHLYAK------------PG-KSNADVRALTYCDLHKIQREDLLEVLDMYP 849
>sp|O54852|KCNH7_RAT Potassium voltage-gated channel subfamily H member 7 OS=Rattus
norvegicus GN=Kcnh7 PE=1 SV=1
Length = 1195
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 218/531 (41%), Gaps = 130/531 (24%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFC---------LDYMADLMYVID 147
F W ++ L +Y Y AF +RE C +D + D+M++ID
Sbjct: 406 FKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQKRRECGYSCSPLNVVDLIVDIMFIID 465
Query: 148 ILIHFRTGYL-EDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLS---------IG 197
ILI+FRT Y+ ++ + +D K+ HY F ID + +P D L IG
Sbjct: 466 ILINFRTTYVNQNEEVVSDPAKIAVHYFKGW-FLIDMVAAIPFDLLIFGSGSDETTTLIG 524
Query: 198 FNSILRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII 253
RL RLV++ R + +R++ Y ++++ L+ IF HW C+++ I
Sbjct: 525 LLKTARLLRLVRVAR------KLDRYSEY-----GAAVLMLLMCIFALIAHWLACIWYAI 573
Query: 254 ------YKNDGFGSRNWV----------YGDSDTTD---VVKQYLQSYYWCTLALTTIG- 293
Y D G W+ Y DSD++ + +Y+ + Y+ +LT++G
Sbjct: 574 GNVERPYLTDKIG---WLDSLGTQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSLTSVGF 630
Query: 294 DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMR 353
P + E F I +L G L++A++ G+V+ I+ + + + ++ VK ++R
Sbjct: 631 GNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKEFIRFH 690
Query: 354 RVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQ 413
++PN L+ ++ ++F + W +N
Sbjct: 691 QIPNPLRQRLEEYFQHAW-------------------------------------TYTNG 713
Query: 414 ATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLR 473
N V G P+ L+A+I ++++ L+ + F+ G L L ++
Sbjct: 714 IDMNMVLKG-------------FPECLQADICLHLNQTLLQNCKAFRGASKGCLRALAMK 760
Query: 474 LRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKR 533
+ PGD + G+ TA L+ LS+ + + + A + I +
Sbjct: 761 FKTTHAPPGDTLVHCGDVLTA---------LYFLSRGSIEILKDDIVVAILGKNDIFGEM 811
Query: 534 LQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP 584
+ Y + PG + A VR++ Y DL + + D+ +VL YP
Sbjct: 812 VHLYAK------------PG-KSNADVRALTYCDLHKIQREDLLEVLDMYP 849
>sp|Q9NS40|KCNH7_HUMAN Potassium voltage-gated channel subfamily H member 7 OS=Homo
sapiens GN=KCNH7 PE=2 SV=2
Length = 1196
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/531 (22%), Positives = 218/531 (41%), Gaps = 130/531 (24%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFC---------LDYMADLMYVID 147
F W ++ L +Y Y AF +RE C +D + D+M++ID
Sbjct: 406 FKAVWDWLILLLVIYTAIFTPYSAAFLLNDREEQKRRECGYSCSPLNVVDLIVDIMFIID 465
Query: 148 ILIHFRTGYL-EDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLS---------IG 197
ILI+FRT Y+ ++ + +D K+ HY F ID + +P D L IG
Sbjct: 466 ILINFRTTYVNQNEEVVSDPAKIAIHYFKGW-FLIDMVAAIPFDLLIFGSGSDETTTLIG 524
Query: 198 FNSILRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII 253
RL RLV++ R + +R++ Y ++++ L+ IF HW C+++ I
Sbjct: 525 LLKTARLLRLVRVAR------KLDRYSEY-----GAAVLMLLMCIFALIAHWLACIWYAI 573
Query: 254 ------YKNDGFGSRNWV----------YGDSDTTD---VVKQYLQSYYWCTLALTTIG- 293
Y D G W+ Y DSD++ + +Y+ + Y+ +LT++G
Sbjct: 574 GNVERPYLTDKIG---WLDSLGQQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSLTSVGF 630
Query: 294 DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMR 353
P + E F I +L G L++A++ G+V+ I+ + + + ++ VK ++R
Sbjct: 631 GNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKEFIRFH 690
Query: 354 RVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQ 413
++PN L+ ++ ++F + W +N
Sbjct: 691 QIPNPLRQRLEEYFQHAW-------------------------------------TYTNG 713
Query: 414 ATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLR 473
N V G P+ L+A+I ++++ L+ + F+ G L L ++
Sbjct: 714 IDMNMVLKG-------------FPECLQADICLHLNQTLLQNCKAFRGASKGCLRALAMK 760
Query: 474 LRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKR 533
+ PGD + G+ TA L+ LS+ + + + A + I +
Sbjct: 761 FKTTHAPPGDTLVHCGDVLTA---------LYFLSRGSIEILKDDIVVAILGKNDIFGEM 811
Query: 534 LQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP 584
+ Y + PG + A VR++ Y DL + + D+ +VL YP
Sbjct: 812 VHLYAK------------PG-KSNADVRALTYCDLHKIQREDLLEVLDMYP 849
>sp|O70507|HCN4_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Mus musculus GN=Hcn4 PE=1
SV=2
Length = 1186
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 118/537 (21%), Positives = 221/537 (41%), Gaps = 128/537 (23%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV R ER +S+G ++ P F +YW + + L + N +I F
Sbjct: 235 GSQKAVEREQERV-KSAG---FWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FK 288
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D ++ID++++FRTG +ED + D +++ Y+ S F +D +
Sbjct: 289 DENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FVVDFI 347
Query: 185 CLLPLDFLYLSIGF---NSILRLFRLVKIYRF---------------WAFMDRTER--HT 224
+P+++++L + + + + R V+I RF ++ + E H
Sbjct: 348 SSIPVEYIFLIVETRIDSEVYKTARAVRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM 407
Query: 225 NY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQ 280
Y + R +LI +L++ HW+GCL ++ F WV + + KQY
Sbjct: 408 TYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVSINGMVNNSWGKQYSY 467
Query: 281 SYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEF 339
+ + + IG P + + ++ ++ G +A +GH ++ S+ ++R+++
Sbjct: 468 ALFKAMSHMLCIGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY 527
Query: 340 QAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHG 399
Q K V+ YM ++P + ++ ++++ + K DEE +
Sbjct: 528 QEKYKQVEQYMSFHKLPPDTRQRIHDYYEHRY-QGKMFDEESILG--------------- 571
Query: 400 GQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTL-KRVEI 458
EL E L+ EI IN + L + +
Sbjct: 572 ---ELSE--------------------------------PLREEI-INFNCRKLVASMPL 595
Query: 459 FQNTEAGFLCELVLRLRPVLFSPGDYICRKG----------------------------- 489
F N + F+ ++ +LR +F PGDYI R+G
Sbjct: 596 FANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETRLADG 655
Query: 490 -----------NRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQ 535
RRTASVR+ Y L+ LS + +VL+EYP R + SI + ++Q
Sbjct: 656 SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRKK-NSILLHKVQ 711
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G +GK+MY + G + V+ K L GSYFGEI +L G
Sbjct: 623 IREGTIGKKMYFIQHGVVSVLTKGNKET--RLADGSYFGEICLLTRG 667
>sp|Q9JKA8|HCN3_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Rattus norvegicus GN=Hcn3
PE=2 SV=1
Length = 780
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 126/545 (23%), Positives = 234/545 (42%), Gaps = 72/545 (13%)
Query: 32 AGGICRSRRDSHVRQ-AKLAPLTSNLTQDKCFHGNTGADCAVHRVAERYPRSSGPNLTFV 90
+GG+ S + RQ L T N + F + + RV +S+G ++
Sbjct: 33 SGGVPESAPEPKRRQLGTLLQPTVNKFSLRVFGSHKAVEIEQERV-----KSAG---AWI 84
Query: 91 FDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDILI 150
P F +YW +I+ L + N V+ F E+ W + ++D +++D+++
Sbjct: 85 IHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FKEENSPPWIVFNVLSDTFFLLDLVL 142
Query: 151 HFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-----SILR 203
+FRTG +E+G + +R Y+ T F +D + +P+D+++L + + +
Sbjct: 143 NFRTGIVVEEGAEILLAPRAIRTRYLR-TWFLVDLISSIPVDYIFLVVELEPRLDAEVYK 201
Query: 204 LFRLVKIYRF---------------WAFMDRTER--HTNY---PNLFRSSSLIHYLLVIF 243
R ++I RF +M + E H Y + R +LI +L++
Sbjct: 202 TARALRIVRFTKILSLLRLLRLSRLIRYMHQWEEIFHMTYDLASAVVRIFNLIGMMLLLC 261
Query: 244 HWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQSYYWCTLALTTIG-DLPRPRSK 301
HW+GCL ++ F S WV + +QY + + + IG P
Sbjct: 262 HWDGCLQFLVPMLQDFPSDCWVSMNRMVNHSWGRQYSHALFKAMSHMLCIGYGQQAPVGM 321
Query: 302 GEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQV 361
+ + ++ ++ G +A +GH ++ S+ ++R+++Q K V+ YM ++P +
Sbjct: 322 PDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADTRQ 381
Query: 362 KVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKY 421
++ +++++ + K DEE + L P EEI + + +
Sbjct: 382 RIHEYYEHRY-QGKMFDEESILGELSEPLR-------------EEIINFTCRGLVAHM-- 425
Query: 422 GSGPLYMSANGPKV--VPDKLKAEI----AINVHLDTLKRVEIFQNTEAGFLCELVLRLR 475
PL+ A+ V V KL+ E+ + V ++ R F + G L L R
Sbjct: 426 ---PLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYF--IQHGLLSVLARGAR 480
Query: 476 PVLFSPGDY---IC-RKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAV 531
+ G Y IC RRTASVR+ Y L+ LS VL+E+P R E++A+
Sbjct: 481 DTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAM 540
Query: 532 KRLQK 536
RL++
Sbjct: 541 DRLRR 545
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G VG++MY + G L V+A + L GSYFGEI +L G
Sbjct: 455 VREGSVGRKMYFIQHGLLSVLARGARDT--RLTDGSYFGEICLLTRG 499
>sp|O88705|HCN3_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Mus musculus GN=Hcn3 PE=1
SV=1
Length = 779
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 150/649 (23%), Positives = 269/649 (41%), Gaps = 84/649 (12%)
Query: 32 AGGICRSRRDSHVRQ-AKLAPLTSNLTQDKCFHGNTGADCAVHRVAERYPRSSGPNLTFV 90
+GG+ S + RQ L T N + F + + RV +S+G ++
Sbjct: 33 SGGVPESAPEPKRRQLGTLLQPTVNKFSLRVFGSHKAVEIEQERV-----KSAG---AWI 84
Query: 91 FDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDILI 150
P F +YW +I+ L + N V+ F E+ W + ++D +++D+++
Sbjct: 85 IHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FKEENSPPWIVFNVLSDTFFLLDLVL 142
Query: 151 HFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFN-----SILR 203
+FRTG +E+G + +R Y+ T F +D + +P+D+++L + + +
Sbjct: 143 NFRTGIVVEEGAEILLAPRAIRTRYLR-TWFLVDLISSIPVDYIFLVVELEPRLDAEVYK 201
Query: 204 LFRLVKIYRF---------------WAFMDRTER--HTNY---PNLFRSSSLIHYLLVIF 243
R ++I RF ++ + E H Y + R +LI +L++
Sbjct: 202 TARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLC 261
Query: 244 HWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQYLQSYYWCTLALTTIG-DLPRPRSK 301
HW+GCL ++ F S WV + +QY + + + IG P
Sbjct: 262 HWDGCLQFLVPMLQDFPSDCWVSMNRMVNHSWGRQYSHALFKAMSHMLCIGYGQQAPVGM 321
Query: 302 GEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQV 361
+ + ++ ++ G +A +GH ++ S+ ++R+++Q K V+ YM ++P +
Sbjct: 322 PDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADTRQ 381
Query: 362 KVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKY 421
++ +++++ + K DEE + L P EEI + + +
Sbjct: 382 RIHEYYEHRY-QGKMFDEESILGELSEPLR-------------EEIINFTCRGLVAHM-- 425
Query: 422 GSGPLYMSANGPKV--VPDKLKAEI----AINVHLDTLKRVEIFQNTEAGFLCELVLRLR 475
PL+ A+ V V KL+ E+ + V ++ R F + G L L R
Sbjct: 426 ---PLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYF--IQHGLLSVLARGAR 480
Query: 476 PVLFSPGDY---IC-RKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAV 531
+ G Y IC RRTASVR+ Y L+ LS VL+E+P R E++A+
Sbjct: 481 DTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAM 540
Query: 532 KRLQKY--KRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVR 589
RL++ K + L++ S P PG S V L + V P R
Sbjct: 541 DRLRRIGKKNSILQRKRS-EPSPG-----SSGGVMEQHLVQHDRDMARGVRGLAPGTGAR 594
Query: 590 LESIAVKRLQKYKRTPLEKGEVGKEMYIV---NRGRLQVVADNGKTVLA 635
L V + PL+ V + I RG L + D+ T+LA
Sbjct: 595 LSGKPVL-WEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPATLLA 642
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G VG++MY + G L V+A + L GSYFGEI +L G
Sbjct: 455 VREGSVGRKMYFIQHGLLSVLARGARDT--RLTDGSYFGEICLLTRG 499
>sp|Q9P1Z3|HCN3_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Homo sapiens GN=HCN3 PE=2
SV=2
Length = 774
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 229/528 (43%), Gaps = 68/528 (12%)
Query: 67 GADCAVHRVAERYPRSSGPNLTFVFDPAGRFSYYWSMIVSLAFLYNFWVIIYRFAFQEIN 126
G+ AV ER +S+G ++ P F +YW +I+ L + N V+ F
Sbjct: 66 GSHKAVEIEQERV-KSAG---AWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FK 119
Query: 127 RESLVIWFCLDYMADLMYVIDILIHFRTG-YLEDGV-LQTDSTKLRDHYMNSTTFYIDCL 184
E+ W + ++D +++D++++FRTG +E+G + +R Y+ T F +D +
Sbjct: 120 EENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLR-TWFLVDLI 178
Query: 185 CLLPLDFLYLSIGFN-----SILRLFRLVKIYRF---------------WAFMDRTER-- 222
+P+D+++L + + + R ++I RF ++ + E
Sbjct: 179 SSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIF 238
Query: 223 HTNY---PNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFGSRNWVYGDSDTTDV-VKQY 278
H Y + R +LI +L++ HW+GCL ++ F WV + +QY
Sbjct: 239 HMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHSWGRQY 298
Query: 279 LQSYYWCTLALTTIG-DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARK 337
+ + + IG P + + ++ ++ G +A +GH ++ S+ ++R+
Sbjct: 299 SHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR 358
Query: 338 EFQAKLDGVKTYMRMRRVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLV 397
++Q K V+ YM ++P + ++ +++++ + K DEE + L P
Sbjct: 359 QYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRY-QGKMFDEESILGELSEPLR------ 411
Query: 398 HGGQYELEEIAIVSNQATPNQVKYGSGPLYMSANGPKV--VPDKLKAEI----AINVHLD 451
EEI + + + PL+ A+ V V KL+ E+ + V
Sbjct: 412 -------EEIINFTCRGLVAHM-----PLFAHADPSFVTAVLTKLRFEVFQPGDLVVREG 459
Query: 452 TLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDY---IC-RKGNRRTASVRSVGYSDLFVL 507
++ R F + G L L R + G Y IC RRTASVR+ Y L+ L
Sbjct: 460 SVGRKMYF--IQHGLLSVLARGARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSL 517
Query: 508 SKTDMWDVLKEYPAARVRLESIAVKRLQKY-KRTPLEKGISPSPFPGN 554
S VL+E+P R E++A+ RL + K+ + + P PG+
Sbjct: 518 SVDHFNAVLEEFPMMRRAFETVAMDRLLRIGKKNSILQRKRSEPSPGS 565
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 606 LEKGEVGKEMYIVNRGRLQVVADNGKTVLATLRAGSYFGEISILNMG 652
+ +G VG++MY + G L V+A + L GSYFGEI +L G
Sbjct: 456 VREGSVGRKMYFIQHGLLSVLARGARDT--RLTDGSYFGEICLLTRG 500
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/519 (19%), Positives = 206/519 (39%), Gaps = 109/519 (21%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAF-----QEINRESLVIWFC-----LDYMADLMYVI 146
F W ++ L +Y Y AF +E + C +D++ D+M+++
Sbjct: 405 FKAVWDWLILLLVIYTAVFTPYSAAFLLKETEEGPPAPDCGYACQPLAVVDFIVDIMFIV 464
Query: 147 DILIHFRTGYLE-DGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLF 205
DILI+FRT Y+ + + + ++ HY F ID + +P D L G ++ L
Sbjct: 465 DILINFRTTYVNANEEVVSHPGRIAVHYFKGW-FLIDMVAAIPFDLLIFGSGSEELIGLL 523
Query: 206 RLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII--YKNDGF 259
+ ++ R + +R++ Y ++++ L+ F HW C+++ I +
Sbjct: 524 KTARLLRLVRVARKLDRYSEY-----GAAVLFLLMCTFALIAHWLACIWYAIGNMEQPHM 578
Query: 260 GSR-NWVYGDSDT------------TDVVKQYLQSYYWCTLALTTIG-DLPRPRSKGEYF 305
SR W++ D + +Y+ + Y+ +LT++G P + E
Sbjct: 579 DSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKI 638
Query: 306 FVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIK 365
F I +L G L++A++ G+V+ I+ + + + ++ V+ ++R ++PN L+ ++ +
Sbjct: 639 FSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEE 698
Query: 366 WFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGP 425
+F + W D + P
Sbjct: 699 YFQHAWSYTNGIDMNAVLKGFP-------------------------------------- 720
Query: 426 LYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYI 485
+ L+A+I ++++ L+ + F+ G L L ++ + PGD +
Sbjct: 721 ------------ECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTL 768
Query: 486 CRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKG 545
G+ TA L+ +S+ + + + A + I + L Y R
Sbjct: 769 VHAGDLLTA---------LYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYAR------ 813
Query: 546 ISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP 584
PG + VR++ Y DL + + D+ +VL YP
Sbjct: 814 ------PG-KSNGDVRALTYCDLHKIHRDDLLEVLDMYP 845
>sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo
sapiens GN=KCNH2 PE=1 SV=1
Length = 1159
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/519 (19%), Positives = 206/519 (39%), Gaps = 109/519 (21%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAF-----QEINRESLVIWFC-----LDYMADLMYVI 146
F W ++ L +Y Y AF +E + + C +D + D+M+++
Sbjct: 406 FKAVWDWLILLLVIYTAVFTPYSAAFLLKETEEGPPATECGYACQPLAVVDLIVDIMFIV 465
Query: 147 DILIHFRTGYLE-DGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLF 205
DILI+FRT Y+ + + + ++ HY F ID + +P D L G ++ L
Sbjct: 466 DILINFRTTYVNANEEVVSHPGRIAVHYFKGW-FLIDMVAAIPFDLLIFGSGSEELIGLL 524
Query: 206 RLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII--YKNDGF 259
+ ++ R + +R++ Y ++++ L+ F HW C+++ I +
Sbjct: 525 KTARLLRLVRVARKLDRYSEY-----GAAVLFLLMCTFALIAHWLACIWYAIGNMEQPHM 579
Query: 260 GSR-NWVYGDSDT------------TDVVKQYLQSYYWCTLALTTIG-DLPRPRSKGEYF 305
SR W++ D + +Y+ + Y+ +LT++G P + E
Sbjct: 580 DSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKI 639
Query: 306 FVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIK 365
F I +L G L++A++ G+V+ I+ + + + ++ V+ ++R ++PN L+ ++ +
Sbjct: 640 FSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEE 699
Query: 366 WFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYGSGP 425
+F + W D + P
Sbjct: 700 YFQHAWSYTNGIDMNAVLKGFP-------------------------------------- 721
Query: 426 LYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYI 485
+ L+A+I ++++ L+ + F+ G L L ++ + PGD +
Sbjct: 722 ------------ECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTL 769
Query: 486 CRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPLEKG 545
G+ TA L+ +S+ + + + A + I + L Y R
Sbjct: 770 VHAGDLLTA---------LYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYAR------ 814
Query: 546 ISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP 584
PG + VR++ Y DL + + D+ +VL YP
Sbjct: 815 ------PG-KSNGDVRALTYCDLHKIHRDDLLEVLDMYP 846
>sp|Q02280|KCNAE_DROME Potassium voltage-gated channel protein eag OS=Drosophila
melanogaster GN=eag PE=1 SV=2
Length = 1174
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 31/319 (9%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDILIHFRTGY 156
F W ++ Y ++ Y AF+ E + + +D + D+++ IDI+++F T +
Sbjct: 235 FKAIWDWVILCLTFYTAIMVPYNVAFKNKTSEDVSL-LVVDSIVDVIFFIDIVLNFHTTF 293
Query: 157 L-EDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLD----FLYLSIGFNSILRLFRLVKIY 211
+ G + +D +R +Y+ S F ID L LP D F G S+ ++V++
Sbjct: 294 VGPGGEVVSDPKVIRMNYLKSW-FIIDLLSCLPYDVFNAFDRDEDGIGSLFSALKVVRLL 352
Query: 212 RFWAFMDRTERHTNYPNLFRSSSLIHYLLVIFHWNGCLYHIIYKNDGFG--SRNWVYGDS 269
R + + +R+ Y L Y+LV HW C+++ I ++D +W++ +
Sbjct: 353 RLGRVVRKLDRYLEYGAAMLILLLCFYMLVA-HWLACIWYSIGRSDADNGIQYSWLWKLA 411
Query: 270 DTTDVV--------------------KQYLQSYYWCTLALTTIG-DLPRPRSKGEYFFVI 308
+ T Y+ + Y+ +T++G + E F I
Sbjct: 412 NVTQSPYSYIWSNDTGPELVNGPSRKSMYVTALYFTMTCMTSVGFGNVAAETDNEKVFTI 471
Query: 309 VQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVKVIKWFD 368
++ LL+AT+ GHV I+ +++A ++ L+ V+ +M++ VP AL +V+ +
Sbjct: 472 CMMIIAALLYATIFGHVTTIIQQMTSATAKYHDMLNNVREFMKLHEVPKALSERVMDYVV 531
Query: 369 YLWLTQKCSDEEKAVSCLP 387
W K D EK ++ P
Sbjct: 532 STWAMTKGLDTEKVLNYCP 550
>sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H member 1 OS=Rattus
norvegicus GN=Kcnh1 PE=1 SV=1
Length = 962
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 148/330 (44%), Gaps = 51/330 (15%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAFQEINRESLVIWFCLDYMADLMYVIDILIHFRTGY 156
F W I+ + Y ++ Y +F+ R++ V W +D + D+++++DI+++F T +
Sbjct: 216 FKTTWDWIILILTFYTAILVPYNVSFK--TRQNNVAWLVVDSIVDVIFLVDIVLNFHTTF 273
Query: 157 L-EDGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLD----FLYLSIGFNSILRLFRLVKIY 211
+ G + +D +R +Y+ T F ID L LP D F + G +S+ ++V++
Sbjct: 274 VGPAGEVISDPKLIRMNYLK-TWFVIDLLSCLPYDVINAFENVDEGISSLFSSLKVVRLL 332
Query: 212 RFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII-------------- 253
R + + + Y ++++ L+ +F HW C+++ I
Sbjct: 333 RLGRVARKLDHYIEY-----GAAVLVLLVCVFGLAAHWMACIWYSIGDYEIFDEDTKTIR 387
Query: 254 ---------------YKNDGFGSRNWVYGDSDTTDVVKQYLQSYYWCTLALTTIG-DLPR 297
Y+ +G GS W G S + Y+ S Y+ +LT++G
Sbjct: 388 NNSWLYQLALDIGTPYQFNGSGSGKWEGGPSKNS----VYISSLYFTMTSLTSVGFGNIA 443
Query: 298 PRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPN 357
P + E F + ++ G LL+AT+ G+V I + A + L+ V+ ++++ +VP
Sbjct: 444 PSTDIEKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPK 503
Query: 358 ALQVKVIKWFDYLWLTQKCSDEEKAVSCLP 387
L +V+ + W + D EK + P
Sbjct: 504 GLSERVMDYIVSTWSMSRGIDTEKVLQICP 533
>sp|Q9H252|KCNH6_HUMAN Potassium voltage-gated channel subfamily H member 6 OS=Homo
sapiens GN=KCNH6 PE=1 SV=1
Length = 994
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/532 (21%), Positives = 212/532 (39%), Gaps = 130/532 (24%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAF----QEINRESLVIWFC-----LDYMADLMYVID 147
F W ++ L +Y Y AF Q+ +R + C +D + D+M+V+D
Sbjct: 255 FKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGACSYTCSPLTVVDLIVDIMFVVD 314
Query: 148 ILIHFRTGYLE-DGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLS---------IG 197
I+I+FRT Y+ + + + ++ HY F ID + +P D L IG
Sbjct: 315 IVINFRTTYVNTNDEVVSHPRRIAVHYFKGW-FLIDMVAAIPFDLLIFRTGSDETTTLIG 373
Query: 198 FNSILRLFRLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII 253
RL RLV++ R + +R++ Y ++++ L+ F HW C+++ I
Sbjct: 374 LLKTARLLRLVRVAR------KLDRYSEY-----GAAVLFLLMCTFALIAHWLACIWYAI 422
Query: 254 ------YKNDGFGSRNWV----------YGDSDTTD---VVKQYLQSYYWCTLALTTIG- 293
Y G W+ Y SD V +Y+ + Y+ +LT++G
Sbjct: 423 GNVERPYLEHKIG---WLDSLGVQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGF 479
Query: 294 DLPRPRSKGEYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMR 353
P + E F I +L G L++A++ G+V+ I+ + + + ++ VK ++R
Sbjct: 480 GNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFH 539
Query: 354 RVPNALQVKVIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQ 413
++PN L+ ++ ++F + W D + P
Sbjct: 540 QIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFP-------------------------- 573
Query: 414 ATPNQVKYGSGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLR 473
+ L+A+I +++H L+ F G L L ++
Sbjct: 574 ------------------------ECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVK 609
Query: 474 LRPVLFSPGDYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKR 533
+ PGD + G+ S L+ +S+ + ++L+ + + V
Sbjct: 610 FKTTHAPPGDTLVHLGDV---------LSTLYFISRGSI-EILR---------DDVVVAI 650
Query: 534 LQKYKRTPLEKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPA 585
L K + +S PG + +A VR++ Y DL + + D+ +VL YPA
Sbjct: 651 LGKNDI--FGEPVSLHAQPG-KSSADVRALTYCDLHKIQRADLLEVLDMYPA 699
>sp|O08962|KCNH2_RAT Potassium voltage-gated channel subfamily H member 2 OS=Rattus
norvegicus GN=Kcnh2 PE=1 SV=1
Length = 1163
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/522 (18%), Positives = 207/522 (39%), Gaps = 115/522 (22%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAF-----QEINRESLVIWFC-----LDYMADLMYVI 146
F W ++ L +Y Y AF ++ ++ + C +D + D+M+++
Sbjct: 408 FKAVWDWLILLLVIYTAVFTPYSAAFLLKETEDGSQAPDCGYACQPLAVVDLLVDIMFIV 467
Query: 147 DILIHFRTGYLE-DGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLF 205
DILI+FRT Y+ + + + ++ HY F ID + +P D L G ++ L
Sbjct: 468 DILINFRTTYVNANEEVVSHPGRIAVHYFKGW-FLIDMVAAIPFDLLIFGSGSEELIGLL 526
Query: 206 RLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII------YK 255
+ ++ R + +R++ Y ++++ L+ F HW C+++ I +
Sbjct: 527 KTARLLRLVRVARKLDRYSEY-----GAAVLFLLMCTFALIAHWLACIWYAIGNMEQPHM 581
Query: 256 NDGFGSRNWVYGDSDT------------TDVVKQYLQSYYWCTLALTTIG-DLPRPRSKG 302
+ G W++ D + +Y+ + Y+ +LT++G P +
Sbjct: 582 DSHIG---WLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNS 638
Query: 303 EYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVK 362
E F I +L G L++A++ G+V+ I+ + + + ++ V+ ++R ++PN L+ +
Sbjct: 639 EKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQR 698
Query: 363 VIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYG 422
+ ++F + W D + P
Sbjct: 699 LEEYFQHAWSYTNGIDMNAVLKGFP----------------------------------- 723
Query: 423 SGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPG 482
+ L+A+I ++++ L+ + F+ G L L ++ + PG
Sbjct: 724 ---------------ECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPG 768
Query: 483 DYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPL 542
D + G+ TA L+ +S+ + + + A + I + L Y R
Sbjct: 769 DTLVHAGDLLTA---------LYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYAR--- 816
Query: 543 EKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP 584
PG + VR++ Y DL + + D+ +VL YP
Sbjct: 817 ---------PG-KSNGDVRALTYCDLHKIHRDDLLEVLDMYP 848
>sp|O35219|KCNH2_MOUSE Potassium voltage-gated channel subfamily H member 2 OS=Mus
musculus GN=Kcnh2 PE=2 SV=2
Length = 1162
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/522 (18%), Positives = 207/522 (39%), Gaps = 115/522 (22%)
Query: 97 FSYYWSMIVSLAFLYNFWVIIYRFAF-----QEINRESLVIWFC-----LDYMADLMYVI 146
F W ++ L +Y Y AF ++ ++ + C +D + D+M+++
Sbjct: 408 FKAVWDWLILLLVIYTAVFTPYSAAFLLKETEDGSQAPDCGYACQPLAVVDLIVDIMFIV 467
Query: 147 DILIHFRTGYLE-DGVLQTDSTKLRDHYMNSTTFYIDCLCLLPLDFLYLSIGFNSILRLF 205
DILI+FRT Y+ + + + ++ HY F ID + +P D L G ++ L
Sbjct: 468 DILINFRTTYVNANEEVVSHPGRIAVHYFKGW-FLIDMVAAIPFDLLIFGSGSEELIGLL 526
Query: 206 RLVKIYRFWAFMDRTERHTNYPNLFRSSSLIHYLLVIF----HWNGCLYHII------YK 255
+ ++ R + +R++ Y ++++ L+ F HW C+++ I +
Sbjct: 527 KTARLLRLVRVARKLDRYSEY-----GAAVLFLLMCTFALIAHWLACIWYAIGNMEQPHM 581
Query: 256 NDGFGSRNWVYGDSDT------------TDVVKQYLQSYYWCTLALTTIG-DLPRPRSKG 302
+ G W++ D + +Y+ + Y+ +LT++G P +
Sbjct: 582 DSHIG---WLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNS 638
Query: 303 EYFFVIVQLLFGLLLFATVLGHVANIVTSVSAARKEFQAKLDGVKTYMRMRRVPNALQVK 362
E F I +L G L++A++ G+V+ I+ + + + ++ V+ ++R ++PN L+ +
Sbjct: 639 EKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQR 698
Query: 363 VIKWFDYLWLTQKCSDEEKAVSCLPGPGSSSTKLVHGGQYELEEIAIVSNQATPNQVKYG 422
+ ++F + W D + P
Sbjct: 699 LEEYFQHAWSYTNGIDMNAVLKGFP----------------------------------- 723
Query: 423 SGPLYMSANGPKVVPDKLKAEIAINVHLDTLKRVEIFQNTEAGFLCELVLRLRPVLFSPG 482
+ L+A+I ++++ L+ + F+ G L L ++ + PG
Sbjct: 724 ---------------ECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPG 768
Query: 483 DYICRKGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYPAARVRLESIAVKRLQKYKRTPL 542
D + G+ TA L+ +S+ + + + A + I + L Y R
Sbjct: 769 DTLVHAGDLLTA---------LYFISRGSIEILRGDVVVAILGKNDIFGEPLNLYAR--- 816
Query: 543 EKGISPSPFPGNRRTASVRSVGYSDLFVLSKTDMWDVLKEYP 584
PG + VR++ Y DL + + D+ +VL YP
Sbjct: 817 ---------PG-KSNGDVRALTYCDLHKIHRDDLLEVLDMYP 848
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,182,313
Number of Sequences: 539616
Number of extensions: 10308393
Number of successful extensions: 27605
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 27035
Number of HSP's gapped (non-prelim): 451
length of query: 679
length of database: 191,569,459
effective HSP length: 124
effective length of query: 555
effective length of database: 124,657,075
effective search space: 69184676625
effective search space used: 69184676625
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)