BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15121
(960 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|327286446|ref|XP_003227941.1| PREDICTED: hypothetical protein LOC100566709 [Anolis carolinensis]
Length = 1049
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 187/409 (45%), Gaps = 68/409 (16%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G +RP+ +L+++N ++ ++F+++ I FL+K + AT+DL AY HI + R HRRF
Sbjct: 103 GGLRPILDLRAVNRHIKARRFRMVTLATILPFLRKGAWFATVDLRDAYFHISVRRSHRRF 162
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTI------KLGRRLRERGVRCLVYLDDFLLASQDPIV 721
L FLI + SF P + + LR+RG+ Y+DD+LL S
Sbjct: 163 LSFLIGDVIYSFNVLPFGLATAPRVFTKCMSVVAAALRQRGITIFPYIDDWLLVSDSRPQ 222
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT------------------- 762
L+ + TL L LG +N +KS + PS + ++G D+
Sbjct: 223 LEFDVSFTLSFLQGLGLIINEEKSHLHPSQTIQFIGALMDSIAERAYLPEERFRSIRASI 282
Query: 763 ----------------------------DLLQVRLP------VDKIPPLRDRLQT----- 783
DL ++R+ + PL D +T
Sbjct: 283 SQLRMSGQASAWHVQSILGHMASTTSLVDLARLRMRPLQFWFLKVFNPLFDSQRTLLRPP 342
Query: 784 -QALIELKWFY--HNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSW 840
L L+W+ HNL P HPP P ++TDAS GWGA + +++ G W+ R+
Sbjct: 343 ASVLESLEWWLKRHNLLKGLPFHPPTPSLELTTDASQDGWGAHLNGMTINGRWSAQHRTL 402
Query: 841 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 900
HINL EL V A+ + L+ +TV L +DN TV Y+ KQGG S LL + ++
Sbjct: 403 HINLLELLAVERALHAFDRLLRGNTVRLVTDNTTVKFYLNKQGGTHSRLLLQTSMRIWDW 462
Query: 901 MSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 948
I++ +PGK N+LADALSR +W L + +RWG
Sbjct: 463 CVDRRINLQAVHLPGKDNALADALSRTTTSNHEWQLNNKEFRLLARRWG 511
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 37 AQALIELKWFY--HNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSW 94
A L L+W+ HNL P HPP P ++TDAS GWGA + +++ G W+ R+
Sbjct: 343 ASVLESLEWWLKRHNLLKGLPFHPPTPSLELTTDASQDGWGAHLNGMTINGRWSAQHRTL 402
Query: 95 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 154
HINL EL V A+ + L+ +TV L +DN TV Y+ KQGG S LL + ++
Sbjct: 403 HINLLELLAVERALHAFDRLLRGNTVRLVTDNTTVKFYLNKQGGTHSRLLLQTSMRIWDW 462
Query: 155 MSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWGIESCAALCDPE 213
I++ +PGK N+LADALSR +W L + +RWG + PE
Sbjct: 463 CVDRRINLQAVHLPGKDNALADALSRTTTSNHEWQLNNKEFRLLARRWGWPAIDLFASPE 522
Query: 214 S 214
+
Sbjct: 523 N 523
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 76/128 (59%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
GL + +L+++N ++ ++F+++ I FL+K + AT+DL AY HI + R HRRFL
Sbjct: 104 GLRPILDLRAVNRHIKARRFRMVTLATILPFLRKGAWFATVDLRDAYFHISVRRSHRRFL 163
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVL 434
FL +Y L FGLA+AP+ F + + VA LR+RG+ Y+DD+LL S L
Sbjct: 164 SFLIGDVIYSFNVLPFGLATAPRVFTKCMSVVAAALRQRGITIFPYIDDWLLVSDSRPQL 223
Query: 435 KNQIFQTL 442
+ + TL
Sbjct: 224 EFDVSFTL 231
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 455 RRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPY 514
R H L+ +TV L +DN TV Y+ KQ G S LL + ++ I++
Sbjct: 414 RALHAFDRLLRGNTVRLVTDNTTVKFYLNKQGGTHSRLLLQTSMRIWDWCVDRRINLQAV 473
Query: 515 FIPGKCNSLADALSRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVT------------R 561
+PGK N+LADALSR +W L + RWG + L+ +
Sbjct: 474 HLPGKDNALADALSRTTTSNHEWQLNNKEFRLLARRWGWPAIDLFASPENTHCPNFCARH 533
Query: 562 NPQDSKAAFIDAFSRKWDFKLAWVFPPPPLL 592
P + DAF W L + FPP PL+
Sbjct: 534 RPNATPGCLGDAFRFVWTGDLLYAFPPLPLI 564
>gi|357630297|gb|EHJ78517.1| putative transposon Ty3-I Gag-Pol polyprotein [Danaus plexippus]
Length = 500
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 150/306 (49%), Gaps = 71/306 (23%)
Query: 698 LRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
LR G+RC+VYLDDFL A+Q L+N I L+++ LGW +N +KS + P+ +++LG
Sbjct: 86 LRNHGIRCVVYLDDFLRANQSKSALQNDIAGALKMMRTLGWMINFQKSVLAPTQCLEFLG 145
Query: 758 ISWDTDLLQVRLPVDKIPPLRDRL-----------QTQALI------------------- 787
I+WDT L K LR L Q Q+++
Sbjct: 146 ITWDTKRNTKSLSGQKCLTLRKALYLLKQSKWSLRQYQSIMGRLKFASFVTRRGRLHCRT 205
Query: 788 -------------------------ELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGA 822
EL+W+ + G P+ P ++T+AS+ GWGA
Sbjct: 206 LQYYSRQLPKTHPHRRVSIPQPVQPELEWWLEEIGGSMPIQIPQLTNLLTTNASNTGWGA 265
Query: 823 MVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQ 882
+ +S+ WT + AI + + N ++LQ+DN+TV++YI K+
Sbjct: 266 QLNEISISRTWT----------------KPAIQLDQDGLQNSQILLQTDNRTVVSYINKE 309
Query: 883 GGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTES 942
GG +S LL +T++LL ++ K+N+H++ +IPG+ N DALSRQ P+WHL+ T
Sbjct: 310 GGTQSLKLLEQTRRLLSVLDKVNMHLIAQYIPGRYNVEVDALSRQKACPEWHLITEATTK 369
Query: 943 VFQRWG 948
+FQ WG
Sbjct: 370 IFQMWG 375
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 100/154 (64%), Gaps = 12/154 (7%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
+ N ++LQ+DN+TV++YI K+ G +S LL +T++LL ++ K+N+H++ +IPG+ N
Sbjct: 288 LQNSQILLQTDNRTVVSYINKEGGTQSLKLLEQTRRLLSVLDKVNMHLIAQYIPGRYNVE 347
Query: 524 ADALSRQALIPDWHLLPSLTESVFPRWG-----------SRVVPLYVTRNPQDSKAAFID 572
DALSRQ P+WHL+ T +F WG + VV YVT++ QD A + +
Sbjct: 348 VDALSRQKACPEWHLITEATTKIFQMWGCPEIDFFASKTAHVVRTYVTKDIQDLDAFYHN 407
Query: 573 AFSRKWDFKLAWVFPPPPLL-QVLHHLNDAQGLY 605
AF R WD+ LAW+FPP L+ +VL HLN A+GL+
Sbjct: 408 AFCRSWDYNLAWLFPPSNLIPRVLAHLNQAKGLH 441
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 16/161 (9%)
Query: 42 ELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKEL 101
EL+W+ + G P+ P ++T+AS+ GWGA + +S+ WT
Sbjct: 231 ELEWWLEEIGGSMPIQIPQLTNLLTTNASNTGWGAQLNEISISRTWT------------- 277
Query: 102 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 161
+ AI + + N ++LQ+DN+TV++YI K+GG +S LL +T++LL ++ K+N+H
Sbjct: 278 ---KPAIQLDQDGLQNSQILLQTDNRTVVSYINKEGGTQSLKLLEQTRRLLSVLDKVNMH 334
Query: 162 IVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWG 202
++ +IPG+ N DALSRQ P+WHL+ T +FQ WG
Sbjct: 335 LIAQYIPGRYNVEVDALSRQKACPEWHLITEATTKIFQMWG 375
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%)
Query: 384 QRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
Q TCL FGL P+ FA ++NW+A LLR G+RC+VYLDDFL A+Q L+N I
Sbjct: 60 QITCLPFGLIPVPRTFASVTNWIAELLRNHGIRCVVYLDDFLRANQSKSALQNDI 114
>gi|301618694|ref|XP_002938748.1| PREDICTED: hypothetical protein LOC100127807 [Xenopus (Silurana)
tropicalis]
Length = 4048
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 177/354 (50%), Gaps = 21/354 (5%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
GT RPV +LK LN ++ ++FK+ + + + ++ ++L ++D+ AY H+PI H+ +
Sbjct: 746 GTFRPVLDLKHLNKWIVYRRFKMESVRSVIRAMEPGEFLTSLDMKDAYLHVPIFPPHQAY 805
Query: 668 LCFL----------IPMDMSSFRPSLSSPGVCPTI--KLGRRLRERGVRCLVYLDDFLLA 715
L F +P +SS +P + I + LR +GV YLDD L+
Sbjct: 806 LRFAFQGQHLQFTALPFGLSS------APRIFTKIMSTMAAHLRVQGVCITPYLDDLLIK 859
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIP 775
++ + + QT+Q L GW +N +KS +IPS R+ +LG +DT +V LP +K+
Sbjct: 860 ARSSHQAERDLTQTMQTLQEFGWTINRQKSFLIPSQRMPFLGFIFDTHQGRVLLPEEKVQ 919
Query: 776 PLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ 835
L +Q + H + G + P ++TDAS GWGA QG+W++
Sbjct: 920 KLISLVQELKTTQRPSIRHCMKGRSLEEPRW--QVITTDASLSGWGATFKTQIAQGLWSE 977
Query: 836 AQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETK 895
++ + IN+ E+ + A+ + + V +QSDN T +AY+ +QGG +S A +E
Sbjct: 978 SEGTLPINILEIRAIFRAVVHWEEQLVDQDVRIQSDNATAVAYLNRQGGTKSVAAASEIS 1037
Query: 896 KLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 948
K+ I IPG N AD LSR + P +W L + + + +WG
Sbjct: 1038 KIFRWAETRVTQISAVHIPGVVNWEADFLSRHYVDPTEWELNTEVFDYITTKWG 1091
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 18/179 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ RP+ +LK LN ++ KFK+ + + I L+ D+LA++D+ AY H+PI + H++
Sbjct: 1823 DGSFRPILDLKLLNRWIVYHKFKMESVRTIIRALEPGDFLASLDIRDAYLHVPIFQPHQQ 1882
Query: 667 FLCFL----------IPMDMSSFRPSLSSPGVCPTI--KLGRRLRERGVRCLVYLDDFLL 714
+L F +P +SS +P + I + LR RGV + YLDD L+
Sbjct: 1883 YLRFAFRNQHFQFIALPFGLSS------APRIFTKIMASMAAFLRVRGVFIMPYLDDLLI 1936
Query: 715 ASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
++ + ++ + T+Q L GW +NL KS + PS + +LG+ + TD+ +V LP DK
Sbjct: 1937 KARSKTLAEHNVQLTIQSLRMFGWSINLDKSSLSPSQNMIFLGLQFQTDIQKVFLPRDK 1995
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 76/124 (61%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN ++ KFK+ + + I L+ D+LA++D+ AY H+PI + H+++L F +
Sbjct: 1829 ILDLKLLNRWIVYHKFKMESVRTIIRALEPGDFLASLDIRDAYLHVPIFQPHQQYLRFAF 1888
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
+ +Q L FGL+SAP+ F ++ +A LR RGV + YLDD L+ ++ + ++ +
Sbjct: 1889 RNQHFQFIALPFGLSSAPRIFTKIMASMAAFLRVRGVFIMPYLDDLLIKARSKTLAEHNV 1948
Query: 439 FQTL 442
T+
Sbjct: 1949 QLTI 1952
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 64 FMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQ 123
++TDAS GWGA + QG+WTQ + IN+ EL + A+ S + N V +Q
Sbjct: 2090 IVTTDASLTGWGATFQGKAAQGLWTQEEALLPINILELRAILLALQSWERFLRNQAVRIQ 2149
Query: 124 SDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQAL 183
SDN T +AYI +QGG RS+ E +L + + IPG N AD LSR L
Sbjct: 2150 SDNATAVAYINRQGGTRSNRANQEVSFILEWAERTATLLSAIHIPGVSNVEADFLSRHHL 2209
Query: 184 IP-DWHLLPSLTESVFQRWGI 203
P +W L + +RWG+
Sbjct: 2210 DPGEWQLHQDAFLCLTRRWGM 2230
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 810 FMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQ 869
++TDAS GWGA + QG+WTQ + IN+ EL + A+ S + N V +Q
Sbjct: 2090 IVTTDASLTGWGATFQGKAAQGLWTQEEALLPINILELRAILLALQSWERFLRNQAVRIQ 2149
Query: 870 SDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQAL 929
SDN T +AYI +QGG RS+ E +L + + IPG N AD LSR L
Sbjct: 2150 SDNATAVAYINRQGGTRSNRANQEVSFILEWAERTATLLSAIHIPGVSNVEADFLSRHHL 2209
Query: 930 IP-DWHLLPSLTESVFQRWG 948
P +W L + +RWG
Sbjct: 2210 DPGEWQLHQDAFLCLTRRWG 2229
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 75/124 (60%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN ++ ++FK+ + + + ++ ++L ++D+ AY H+PI H+ +L F +
Sbjct: 751 VLDLKHLNKWIVYRRFKMESVRSVIRAMEPGEFLTSLDMKDAYLHVPIFPPHQAYLRFAF 810
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
+G Q T L FGL+SAP+ F ++ + +A LR +GV YLDD L+ ++ S + +
Sbjct: 811 QGQHLQFTALPFGLSSAPRIFTKIMSTMAAHLRVQGVCITPYLDDLLIKARSSHQAERDL 870
Query: 439 FQTL 442
QT+
Sbjct: 871 TQTM 874
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 65 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 124
++TDAS GWGA QG+W++++ + IN+ E+ + A+ + + V +QS
Sbjct: 953 ITTDASLSGWGATFKTQIAQGLWSESEGTLPINILEIRAIFRAVVHWEEQLVDQDVRIQS 1012
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 184
DN T +AY+ +QGG +S A +E K+ I IPG N AD LSR +
Sbjct: 1013 DNATAVAYLNRQGGTKSVAAASEISKIFRWAETRVTQISAVHIPGVVNWEADFLSRHYVD 1072
Query: 185 P-DWHLLPSLTESVFQRWG 202
P +W L + + + +WG
Sbjct: 1073 PTEWELNTEVFDYITTKWG 1091
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
+ + V +QSDN T + Y+ +Q G +S A +E K+ I IPG N
Sbjct: 1003 LVDQDVRIQSDNATAVAYLNRQGGTKSVAAASEISKIFRWAETRVTQISAVHIPGVVNWE 1062
Query: 524 ADALSRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRN----------PQDSKAAFID 572
AD LSR + P +W L + + + +WG + L +R+ +D A D
Sbjct: 1063 ADFLSRHYVDPTEWELNTEVFDYITTKWGQPDLDLMASRHNRKTDRFIAKARDPLAEDAD 1122
Query: 573 AFSRKWDFKLAW 584
A + +W F LA+
Sbjct: 1123 AMTAEWVFSLAY 1134
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 466 NHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 525
N V +QSDN T + YI +Q G RSN E +L + + IPG N AD
Sbjct: 2143 NQAVRIQSDNATAVAYINRQGGTRSNRANQEVSFILEWAERTATLLSAIHIPGVSNVEAD 2202
Query: 526 ALSRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRN 562
LSR L P +W L + RWG + L +R+
Sbjct: 2203 FLSRHHLDPGEWQLHQDAFLCLTRRWGMPEIDLMASRH 2240
>gi|326678616|ref|XP_689703.4| PREDICTED: enzymatic polyprotein-like [Danio rerio]
Length = 585
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 181/379 (47%), Gaps = 46/379 (12%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
G RP+ +L+ LN + F+++ ++I ++ D+ A IDL AY H+ I RHR+
Sbjct: 78 SGGSRPILDLRVLNRCLHKLPFRMLTQRRILQCVRPRDWFAAIDLKDAYFHVSILPRHRQ 137
Query: 667 FLCF----------LIPMDMSSFRPSLSSPGVCPTIKLGRR--LRERGVRCLVYLDDFLL 714
FL F ++P +S SP V + G LR G+R L YLDD+L+
Sbjct: 138 FLRFAFEGRAWQYKVLPFGLSL------SPRVFTKLAEGALAPLRLAGIRILSYLDDWLI 191
Query: 715 ---ASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT---DLLQVR 768
+ + I+ ++++L+ L+LL G QVN +KS++ P R+ +LG+ D+ LL
Sbjct: 192 LAHSREQLIMHRDEVLRHLRLL---GLQVNREKSKLAPVQRISFLGMELDSITMRLLGHM 248
Query: 769 LPVDKIPPL--------------RDRLQTQALIELKWFYHNLTGF----TPLHPPVPRTF 810
+ PL R R+ AL N F PL
Sbjct: 249 ASAAAVTPLGLLHMRPLQHWLHDRHRVSVTALCRRALSPWNDPSFLQAGVPLGQASSHVV 308
Query: 811 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 870
+STDAS+ GWGA+ + G+W AQ WHIN EL V A+ ++ V++++
Sbjct: 309 VSTDASNTGWGAVCRGHAAAGLWKGAQLHWHINRLELLAVFLALHRFLPVLERQHVLVRT 368
Query: 871 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 930
D+ AYI + GG+RS + ++LLL + +PG N ADALSRQ L
Sbjct: 369 DSTAAAAYINRMGGMRSRRMSQLARRLLLWSHPRLKSLRAIHVPGTLNRAADALSRQLLR 428
Query: 931 P-DWHLLPSLTESVFQRWG 948
P +W L P + ++ R+G
Sbjct: 429 PGEWRLHPESVQLIWARFG 447
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 50 LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAIS 109
L PL +STDAS+ GWGA+ + G+W AQ WHIN EL V A+
Sbjct: 294 LQAGVPLGQASSHVVVSTDASNTGWGAVCRGHAAAGLWKGAQLHWHINRLELLAVFLALH 353
Query: 110 SNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPG 169
++ V++++D+ AYI + GG+RS + ++LLL + +PG
Sbjct: 354 RFLPVLERQHVLVRTDSTAAAAYINRMGGMRSRRMSQLARRLLLWSHPRLKSLRAIHVPG 413
Query: 170 KCNSLADALSRQALIP-DWHLLPSLTESVFQRWGIESCAALCDPES 214
N ADALSRQ L P +W L P + ++ R+G PE+
Sbjct: 414 TLNRAADALSRQLLRPGEWRLHPESVQLIWARFGEAQIDLFASPEN 459
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +L+ LN + F+++ ++I ++ D+ A IDL AY H+ I RHR+FL F +
Sbjct: 84 ILDLRVLNRCLHKLPFRMLTQRRILQCVRPRDWFAAIDLKDAYFHVSILPRHRQFLRFAF 143
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL---ASQDSVVLK 435
+G +Q L FGL+ +P+ F +L+ LR G+R L YLDD+L+ + + ++ +
Sbjct: 144 EGRAWQYKVLPFGLSLSPRVFTKLAEGALAPLRLAGIRILSYLDDWLILAHSREQLIMHR 203
Query: 436 NQIFQTL 442
+++ + L
Sbjct: 204 DEVLRHL 210
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
V++++D+ YI + G+RS + ++LLL + +PG N ADALS
Sbjct: 364 VLVRTDSTAAAAYINRMGGMRSRRMSQLARRLLLWSHPRLKSLRAIHVPGTLNRAADALS 423
Query: 529 RQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRNPQDSKAAF--------IDAFSRKWD 579
RQ L P +W L P + ++ R+G + L+ + + F DA + W
Sbjct: 424 RQLLRPGEWRLHPESVQLIWARFGEAQIDLFASPENAHCQLFFSLTEGSLGTDALAHSWP 483
Query: 580 FKL-AWVFPPPPLL 592
+ + FPP LL
Sbjct: 484 RGMRKYAFPPVSLL 497
>gi|326671087|ref|XP_002660956.2| PREDICTED: enzymatic polyprotein-like [Danio rerio]
Length = 714
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 181/379 (47%), Gaps = 46/379 (12%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
G RP+ +L+ LN + F+++ ++I ++ D+ A IDL AY H+ I RHR+
Sbjct: 86 SGGSRPILDLRVLNRCLHRLPFRMLTQRRILQCVRPRDWFAAIDLKDAYFHVSILPRHRQ 145
Query: 667 FLCF----------LIPMDMSSFRPSLSSPGVCPTIKLGR--RLRERGVRCLVYLDDFLL 714
FL F ++P +S SP V + G LR G+R L YLDD+L+
Sbjct: 146 FLRFAFEGRAWQYKVLPFGLSL------SPWVFTKLAEGALAPLRLAGIRILNYLDDWLI 199
Query: 715 ---ASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT---DLLQVR 768
+ + I+ ++++L+ L+LL G QVN +KS++ P R+ +LG+ D+ LL
Sbjct: 200 LAHSREQLIMHRDKVLRHLRLL---GLQVNREKSKLAPVQRISFLGMELDSITMRLLGHM 256
Query: 769 LPVDKIPPL--------------RDRLQTQALIELKWFYHNLTGF----TPLHPPVPRTF 810
+ PL R R+ AL N F PL
Sbjct: 257 ASAAAVTPLGLLHMRPLQHWLHDRHRVLVTALCRRALSPWNDPSFLQAGVPLGQASSHVV 316
Query: 811 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 870
+STDAS+ GWGA+ + G+W AQ WHIN EL V A+ ++ V++++
Sbjct: 317 VSTDASNTGWGAVCRGHAAAGLWKGAQLHWHINRLELLAVFLALHRFLPVLERQHVLVRT 376
Query: 871 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 930
D+ AYI + GG+RS + ++LLL + +PG N ADALSRQ L
Sbjct: 377 DSMAAAAYINRMGGMRSRRMSQLARRLLLWSHPRLKSLRAIHVPGTINRAADALSRQLLR 436
Query: 931 P-DWHLLPSLTESVFQRWG 948
P +W L P + ++ R+G
Sbjct: 437 PGEWRLHPKSVQLIWARFG 455
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 50 LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAIS 109
L PL +STDAS+ GWGA+ + G+W AQ WHIN EL V A+
Sbjct: 302 LQAGVPLGQASSHVVVSTDASNTGWGAVCRGHAAAGLWKGAQLHWHINRLELLAVFLALH 361
Query: 110 SNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPG 169
++ V++++D+ AYI + GG+RS + ++LLL + +PG
Sbjct: 362 RFLPVLERQHVLVRTDSMAAAAYINRMGGMRSRRMSQLARRLLLWSHPRLKSLRAIHVPG 421
Query: 170 KCNSLADALSRQALIP-DWHLLPSLTESVFQRWGIESCAALCDPES 214
N ADALSRQ L P +W L P + ++ R+G PE+
Sbjct: 422 TINRAADALSRQLLRPGEWRLHPKSVQLIWARFGEAQIDLFASPEN 467
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G + +L+ LN + F+++ ++I ++ D+ A IDL AY H+ I RHR+FL
Sbjct: 88 GSRPILDLRVLNRCLHRLPFRMLTQRRILQCVRPRDWFAAIDLKDAYFHVSILPRHRQFL 147
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F ++G +Q L FGL+ +P F +L+ LR G+R L YLDD+L+
Sbjct: 148 RFAFEGRAWQYKVLPFGLSLSPWVFTKLAEGALAPLRLAGIRILNYLDDWLI 199
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
V++++D+ YI + G+RS + ++LLL + +PG N ADALS
Sbjct: 372 VLVRTDSMAAAAYINRMGGMRSRRMSQLARRLLLWSHPRLKSLRAIHVPGTINRAADALS 431
Query: 529 RQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRNPQDSKAAF--------IDAFSRKWD 579
RQ L P +W L P + ++ R+G + L+ + + F DA + W
Sbjct: 432 RQLLRPGEWRLHPKSVQLIWARFGEAQIDLFASPENAHCQLFFSLTEGSLGTDALAHSWP 491
Query: 580 FKL-AWVFPPPPLL 592
+ + FPP LL
Sbjct: 492 RGMRKYAFPPVSLL 505
>gi|301612402|ref|XP_002935710.1| PREDICTED: transposon Ty3-I Gag-Pol polyprotein-like, partial
[Xenopus (Silurana) tropicalis]
Length = 683
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 181/407 (44%), Gaps = 65/407 (15%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ RPV +LK LN+++ +FK+ + + + + N++L +D+ AY H+PI H +
Sbjct: 156 DGSFRPVLDLKHLNAFIRFSRFKMESLRSVISAMNPNEFLVALDIKDAYLHVPIFPPHWK 215
Query: 667 FLCFLIPMDMSSFRPS----LSSPGVCPTI--KLGRRLRERGVRCLVYLDDFLLASQDPI 720
FL F + F S+P + I LR RGV YLDD LL +
Sbjct: 216 FLRFALKNQHFQFTALPFGLTSAPRIFTKIMSAAAASLRSRGVSITPYLDDLLLKAPSLP 275
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKI------ 774
+Q+ + LT LGW++N KS++ PS R+ +LG+ +DT +V LP +KI
Sbjct: 276 AATSQLSLVMDFLTALGWKINTAKSRLTPSQRMPFLGMVFDTTEQRVLLPPEKITRIQSL 335
Query: 775 -------PPLRDRLQTQAL------IE-----------LKWFYHNLTGFTPLHPPV---P 807
P RL Q L IE L+W + + L P+ P
Sbjct: 336 VRQLLHNPQPSVRLAMQVLGSLVSSIEAVPFAQFHLRALQWNILDQWNRSSLSQPIKLLP 395
Query: 808 RTFMST-------------DASDVGWGAMVGNVSVQ------------GVWTQAQRSWHI 842
+T ++ + W + + S+Q G WT A+ I
Sbjct: 396 KTRVAMTWWLNSTHLEKGRSLQEPKWLILTTDASLQGWGAVMGHLTAQGTWTAAETRLPI 455
Query: 843 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMS 902
N+ E+ VR A+ + + + +QSDN T +AY+ QGG RS L E ++L
Sbjct: 456 NILEIRAVRLALCHWQNRLTGCDIKVQSDNATTVAYLNHQGGTRSRQALKEVSRILTWAE 515
Query: 903 KLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 948
+ + +IPG N AD LSRQ L P +W L P + + + WG
Sbjct: 516 AREVRLSAIYIPGLENWQADYLSRQRLDPGEWALNPGIFQDIVALWG 562
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 1/161 (0%)
Query: 65 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 124
++TDAS GWGA++G+++ QG WT A+ IN+ E+ VR A+ + + + +QS
Sbjct: 424 LTTDASLQGWGAVMGHLTAQGTWTAAETRLPINILEIRAVRLALCHWQNRLTGCDIKVQS 483
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 184
DN T +AY+ QGG RS L E ++L + + +IPG N AD LSRQ L
Sbjct: 484 DNATTVAYLNHQGGTRSRQALKEVSRILTWAEAREVRLSAIYIPGLENWQADYLSRQRLD 543
Query: 185 P-DWHLLPSLTESVFQRWGIESCAALCDPESPGQQGGIHRC 224
P +W L P + + + WG+ + ++ + RC
Sbjct: 544 PGEWALNPGIFQDIVALWGLPEVDLMASRQNRKVTQFMSRC 584
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+++ +FK+ + + + + N++L +D+ AY H+PI H +FL F
Sbjct: 162 VLDLKHLNAFIRFSRFKMESLRSVISAMNPNEFLVALDIKDAYLHVPIFPPHWKFLRFAL 221
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
K +Q T L FGL SAP+ F ++ + A LR RGV YLDD LL +
Sbjct: 222 KNQHFQFTALPFGLTSAPRIFTKIMSAAAASLRSRGVSITPYLDDLLLKA 271
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
+ +QSDN T + Y+ Q G RS L E ++L + + +IPG N AD LS
Sbjct: 479 IKVQSDNATTVAYLNHQGGTRSRQALKEVSRILTWAEAREVRLSAIYIPGLENWQADYLS 538
Query: 529 RQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRNP----------QDSKAAFIDAFSRK 577
RQ L P +W L P + + + WG V L +R +D A DA +
Sbjct: 539 RQRLDPGEWALNPGIFQDIVALWGLPEVDLMASRQNRKVTQFMSRCRDPLALAADALTTT 598
Query: 578 WDFKLAWVFPPPPLL 592
WDF LA+ FPP PLL
Sbjct: 599 WDFDLAYAFPPLPLL 613
>gi|301619133|ref|XP_002938952.1| PREDICTED: transposon Ty3-G Gag-Pol polyprotein-like [Xenopus
(Silurana) tropicalis]
Length = 707
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 182/410 (44%), Gaps = 69/410 (16%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG RPV NL LN +V ++FK+ + I L N +++ ID+ AY HIPI H+R
Sbjct: 167 DGGFRPVLNLHPLNKFVRYERFKMESLPSIIRSLSPNLFMSKIDIKDAYLHIPINAFHQR 226
Query: 667 FLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRL---RERGVRCLVYLDDFLLASQDP- 719
FL F I F+ L+S T LG L R +GV YLDD ++ +Q
Sbjct: 227 FLRFAIGQSHFQFQALPFGLTSAPRVFTKVLGALLAVLRLQGVHVTAYLDDLIVTAQSEK 286
Query: 720 -------------------IVLKNQILQTLQLLTYLGWQVN-LKKSQIIPSHRVDYL--- 756
I K +L Q L +LG Q+N + + +P H+ L
Sbjct: 287 EANSHTRECLHTLRQHGWIINRKKSLLSPTQALEFLGMQINTVDRKVFLPLHKAITLQQM 346
Query: 757 --GISWDT-----DLLQ----VRLPVDKIPPLRDRLQT---------------------- 783
I W + D+L+ + ++ +P + L+T
Sbjct: 347 AQNIRWQSQTSAHDILRLLGLMAASIEAVPFAKFHLRTLQWEFLKLWDKNHQDLSQKINL 406
Query: 784 --QALIELKWFYH--NLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRS 839
+ + L W+ H NLT PV + ++TDAS VGWGA QG W++ +
Sbjct: 407 SSKVQLSLSWWIHLPNLTQGKSWDCPV-QEIVTTDASRVGWGATWPPKVCQGTWSRQELK 465
Query: 840 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 899
HIN EL V A+ + + V +QSDN T +AY+ +QGG RS + L E +++
Sbjct: 466 LHINALELKAVFYALLHWQTCMKGKHVRIQSDNSTTVAYLNRQGGTRSASALREVSRIMT 525
Query: 900 IMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 948
+ + FIPG N AD LSR L P +W L P + + + ++WG
Sbjct: 526 WAETHQVLLSAVFIPGIQNWEADYLSRTTLDPGEWKLKPEIFQQIVKKWG 575
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 31 QLLTYLAQALIELKWFYH--NLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWT 88
Q + ++ + L W+ H NLT PV + ++TDAS VGWGA QG W+
Sbjct: 402 QKINLSSKVQLSLSWWIHLPNLTQGKSWDCPV-QEIVTTDASRVGWGATWPPKVCQGTWS 460
Query: 89 QAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAET 148
+ + HIN EL V A+ + + V +QSDN T +AY+ +QGG RS + L E
Sbjct: 461 RQELKLHINALELKAVFYALLHWQTCMKGKHVRIQSDNSTTVAYLNRQGGTRSASALREV 520
Query: 149 KKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWGI 203
+++ + + FIPG N AD LSR L P +W L P + + + ++WG+
Sbjct: 521 SRIMTWAETHQVLLSAVFIPGIQNWEADYLSRTTLDPGEWKLKPEIFQQIVKKWGL 576
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ G + NL LN +V ++FK+ + I L N +++ ID+ AY HIPI H+R
Sbjct: 167 DGGFRPVLNLHPLNKFVRYERFKMESLPSIIRSLSPNLFMSKIDIKDAYLHIPINAFHQR 226
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
FL F + +Q L FGL SAP+ F ++ + +LR +GV YLDD ++ +Q
Sbjct: 227 FLRFAIGQSHFQFQALPFGLTSAPRVFTKVLGALLAVLRLQGVHVTAYLDDLIVTAQSE 285
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
V +QSDN T + Y+ +Q G RS + L E +++ + + FIPG N AD LS
Sbjct: 492 VRIQSDNSTTVAYLNRQGGTRSASALREVSRIMTWAETHQVLLSAVFIPGIQNWEADYLS 551
Query: 529 RQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTR-NPQ---------DSKAAFIDAFSRK 577
R L P +W L P + + + +WG + + +R N Q D KA +DA +
Sbjct: 552 RTTLDPGEWKLKPEIFQQIVKKWGLPCLDIMASRFNSQIPRFLSKVHDPKAEGVDALTSP 611
Query: 578 WDFKLAWVFPPPPLLQVLHH 597
W +LA+ FPP PL+ L H
Sbjct: 612 WHCQLAYAFPPIPLIPRLLH 631
>gi|357609981|gb|EHJ66772.1| hypothetical protein KGM_00439 [Danaus plexippus]
Length = 264
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 108/193 (55%), Gaps = 2/193 (1%)
Query: 759 SWDTDLLQVRL-PVDKIPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRT-FMSTDAS 816
+W LLQ+ + K P + + + EL W+ N+ G + +HP T + TDAS
Sbjct: 56 NWHCRLLQLHSNKLRKCPQSQIQFSEEVRTELIWWMENIDGESSIHPKRMSTNHVITDAS 115
Query: 817 DVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVI 876
D+ WGA+V N ++G W +WH NL+++ V AIS + N TV+L +DNKTV+
Sbjct: 116 DIQWGALVNNELMKGAWEHHHTNWHCNLEDMSAVLTAISVKAMELRNSTVILHNDNKTVV 175
Query: 877 AYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLL 936
YI+ +GG RS LL T++LL ++ NI + P +PG N+ AD LSR + +WH+
Sbjct: 176 TYIKNEGGTRSCQLLELTRQLLNLVDHFNIVLYPRHLPGLLNTEADHLSRNRVAVEWHIR 235
Query: 937 PSLTESVFQRWGT 949
T +F WGT
Sbjct: 236 DKETLRLFSLWGT 248
Score = 129 bits (324), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Query: 33 LTYLAQALIELKWFYHNLTGFTPLHPPVPRT-FMSTDASDVGWGAMVGNVSVQGVWTQAQ 91
+ + + EL W+ N+ G + +HP T + TDASD+ WGA+V N ++G W
Sbjct: 77 IQFSEEVRTELIWWMENIDGESSIHPKRMSTNHVITDASDIQWGALVNNELMKGAWEHHH 136
Query: 92 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 151
+WH NL+++ V AIS + N TV+L +DNKTV+ YI+ +GG RS LL T++L
Sbjct: 137 TNWHCNLEDMSAVLTAISVKAMELRNSTVILHNDNKTVVTYIKNEGGTRSCQLLELTRQL 196
Query: 152 LLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWG 202
L ++ NI + P +PG N+ AD LSR + +WH+ T +F WG
Sbjct: 197 LNLVDHFNIVLYPRHLPGLLNTEADHLSRNRVAVEWHIRDKETLRLFSLWG 247
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%)
Query: 466 NHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 525
N TV+L +DNKTV+TYI+ + G RS LL T++LL ++ NI + P +PG N+ AD
Sbjct: 162 NSTVILHNDNKTVVTYIKNEGGTRSCQLLELTRQLLNLVDHFNIVLYPRHLPGLLNTEAD 221
Query: 526 ALSRQALIPDWHLLPSLTESVFPRWGSRVVPLYVTR 561
LSR + +WH+ T +F WG+ + L+ ++
Sbjct: 222 HLSRNRVAVEWHIRDKETLRLFSLWGTPDLDLFASQ 257
>gi|384497823|gb|EIE88314.1| hypothetical protein RO3G_13025 [Rhizopus delemar RA 99-880]
Length = 1062
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 177/413 (42%), Gaps = 69/413 (16%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG +RPVFNLK LN Y+ FK+ +++ L + NDYL +IDLS A+ HI + RR
Sbjct: 372 DGGIRPVFNLKRLNQYLDAPHFKMETIREVALMINPNDYLVSIDLSDAFLHIGLHPESRR 431
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI--KLGR----RLRERGVRCLVYLDDFLLASQDP- 719
FL + + + P + K+ R R +G R YLDD++LA+
Sbjct: 432 FLRLKWKDQVYQYCTTAFGLSTSPFVFSKVCRPILEHFRSQGYRISAYLDDWILAANTKQ 491
Query: 720 -------------------IVLKNQILQTLQLLTYLGWQVNLKK-SQIIPSHRVDYLGIS 759
I K +L Q L +LG+ +N K + +P ++ L S
Sbjct: 492 LAIQQAQTVVNLLQQLGWLINFKKSVLTPTQQLKHLGFVLNTKTMTASLPMKKLRDLRRS 551
Query: 760 WDTDL-------------LQVRLPVDKIPPLRDRLQTQALI------------------- 787
L + +R+ RL T+ L+
Sbjct: 552 IKQILDHPRRQTPRVIHSVTMRIQATTFAIFPARLYTRRLLYHKNQTVHMDKDWDHPVSL 611
Query: 788 ------ELKWFYHNLTGFT--PLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRS 839
EL+W+Y+NL + P P + DAS+ GWG N G WT +
Sbjct: 612 DQESQQELQWWYNNLKLWNGRSFLPTTPSETVYVDASNTGWGCSWRNHRTHGYWTPEEAQ 671
Query: 840 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 899
IN +EL A+ + P+L N TV++++DN T + YI KQGG RS L+ ++
Sbjct: 672 QSINWRELKAAYLALQTFPTL-RNTTVLIRTDNTTSMTYINKQGGTRSLPLMTLATQVWT 730
Query: 900 IMSKLNIHIVPYFIPGKCNSLADALSRQALIPD-WHLLPSLTESVFQRWGTIS 951
K NI + +I G N +AD SR+ + W + P++ + + + WG S
Sbjct: 731 WCLKNNIMLQAQYIQGIHNKVADFESRRQYFKNLWMIKPAIFQQINRMWGPYS 783
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G+ +FNLK LN Y+ FK+ +++ L + NDYL +IDLS A+ HI + RRFL
Sbjct: 374 GIRPVFNLKRLNQYLDAPHFKMETIREVALMINPNDYLVSIDLSDAFLHIGLHPESRRFL 433
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+K VYQ +FGL+++P F+++ + R +G R YLDD++LA+
Sbjct: 434 RLKWKDQVYQYCTTAFGLSTSPFVFSKVCRPILEHFRSQGYRISAYLDDWILAA 487
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 42 ELKWFYHNLTGFT--PLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLK 99
EL+W+Y+NL + P P + DAS+ GWG N G WT + IN +
Sbjct: 618 ELQWWYNNLKLWNGRSFLPTTPSETVYVDASNTGWGCSWRNHRTHGYWTPEEAQQSINWR 677
Query: 100 ELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLN 159
EL A+ + P+L N TV++++DN T + YI KQGG RS L+ ++ K N
Sbjct: 678 ELKAAYLALQTFPTL-RNTTVLIRTDNTTSMTYINKQGGTRSLPLMTLATQVWTWCLKNN 736
Query: 160 IHIVPYFIPGKCNSLADALSRQALIPD-WHLLPSLTESVFQRWGIESCAALCD 211
I + +I G N +AD SR+ + W + P++ + + + WG S D
Sbjct: 737 IMLQAQYIQGIHNKVADFESRRQYFKNLWMIKPAIFQQINRMWGPYSVDLFAD 789
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Query: 460 THSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGK 519
T + N TV++++DN T +TYI KQ G RS L+ ++ K NI + +I G
Sbjct: 688 TFPTLRNTTVLIRTDNTTSMTYINKQGGTRSLPLMTLATQVWTWCLKNNIMLQAQYIQGI 747
Query: 520 CNSLADALSRQALIPD-WHLLPSLTESVFPRWG-----------SRVVPLYVTRNPQDSK 567
N +AD SR+ + W + P++ + + WG +R++P YV+ P D
Sbjct: 748 HNKVADFESRRQYFKNLWMIKPAIFQQINRMWGPYSVDLFADRTTRLLPKYVSWIP-DPH 806
Query: 568 AAFIDAFSRKWD-FKLAWVFPPPPLL-QVLHHL 598
A DAF+ W F ++ PP L+ +VLH +
Sbjct: 807 AIHTDAFTIPWKRFPHPFINPPWNLITRVLHKI 839
>gi|357609714|gb|EHJ66600.1| putative transposon Ty3-I Gag-Pol polyprotein [Danaus plexippus]
Length = 421
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 132/283 (46%), Gaps = 58/283 (20%)
Query: 697 RLRERGVRCLVYLDDFLLASQ--DPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVD 754
R R+RG + F + SQ D +L Q+ +Q LT LGW V +K P+ +D
Sbjct: 32 RKRQRGASLQDLEERFDILSQQLDRDILTTQVQVAIQFLTDLGWWVYTEKLIQTPTRSID 91
Query: 755 YLGISWDTDLLQVRLPVDKIPPLRD----------------------------------- 779
YLG W+ LP DK+ +R
Sbjct: 92 YLGEVWNPSFNTKFLPSDKLQRIRQILHARLVAGTWNLKQPQRLLGDLNFATFITHSRRL 151
Query: 780 -----RLQTQAL---------------IELKWFYHNLTGFTPLHPPVPRT-FMSTDASDV 818
+LQ+ L EL W+ N+ G +P+HP T + TDASD+
Sbjct: 152 HCRLLQLQSNKLRKCPQSQIQFSEEVRTELIWWMENIGGQSPIHPKRMSTNHIITDASDI 211
Query: 819 GWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAY 878
WGA+V N ++G W Q ++H NLKE+ V AIS + N TV+LQ+DNKTV+ Y
Sbjct: 212 QWGALVNNELIKGAWEHHQTNYHCNLKEMSAVLTAISVKAMELRNSTVILQNDNKTVVTY 271
Query: 879 IRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLA 921
++ +GG RSH LL T++LL ++ + NI + + +PG N+ A
Sbjct: 272 MKNEGGTRSHQLLELTRQLLNLLDQFNIVLRSHHLPGLLNTEA 314
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
Query: 33 LTYLAQALIELKWFYHNLTGFTPLHPPVPRT-FMSTDASDVGWGAMVGNVSVQGVWTQAQ 91
+ + + EL W+ N+ G +P+HP T + TDASD+ WGA+V N ++G W Q
Sbjct: 171 IQFSEEVRTELIWWMENIGGQSPIHPKRMSTNHIITDASDIQWGALVNNELIKGAWEHHQ 230
Query: 92 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 151
++H NLKE+ V AIS + N TV+LQ+DNKTV+ Y++ +GG RSH LL T++L
Sbjct: 231 TNYHCNLKEMSAVLTAISVKAMELRNSTVILQNDNKTVVTYMKNEGGTRSHQLLELTRQL 290
Query: 152 LLIMSKLNIHIVPYFIPGKCNSLA 175
L ++ + NI + + +PG N+ A
Sbjct: 291 LNLLDQFNIVLRSHHLPGLLNTEA 314
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 29/141 (20%)
Query: 466 NHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 525
N TV+LQ+DNKTV+TY++ + G RS+ LL T++LL ++ + NI + + +PG N+ A
Sbjct: 256 NSTVILQNDNKTVVTYMKNEGGTRSHQLLELTRQLLNLLDQFNIVLRSHHLPGLLNTEAC 315
Query: 526 ALSRQALIPDWHLLPSLTESVFPRWGSRVVPLYVTRNPQDSKAAFIDAFSRKWDFKLAWV 585
+ L R+ DSKA F DAFS+ W ++LA +
Sbjct: 316 ISETRKL----------------------------RDLSDSKAYFHDAFSQSWHYRLARL 347
Query: 586 FPPPPLL-QVLHHLNDAQGLY 605
FPPP L+ +VL HL G +
Sbjct: 348 FPPPSLIPRVLDHLISVSGQF 368
>gi|170819710|gb|ACB38665.1| reverse transcriptase [Daphnia pulex]
Length = 1291
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 177/408 (43%), Gaps = 70/408 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G RP+ NLK LN ++ + FK+ N + + ++K D+LA +DL AY + + + HR++
Sbjct: 712 GQFRPIVNLKPLNKFIRYQHFKMENLESVRFLVRKGDWLAKVDLKDAYFTVAVKKEHRKY 771
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTI------KLGRRLRERGVRCLVYLDDFLLASQDPIV 721
L F + F + + G+ P + + LR +G+R ++YLDD L+ ++
Sbjct: 772 LRFRWGKRVFEF--NCMAFGLAPRVFTKILKTVMAFLRRKGIRLVIYLDDILVLNESKEG 829
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRL 781
L + L+LL LG+ +N +KS I P+ ++YLG+ D++ LP K +R
Sbjct: 830 LVADVNTVLELLQSLGFLINWEKSIIAPTQVIEYLGLIVDSNDPSFSLPCAKAAAVRKMC 889
Query: 782 QT---QALIELKWFYHNLTGFTPLHPPVP----------RTFMS---------------- 812
+T + + L+ F P +P R ++S
Sbjct: 890 ETALSEGKVSLRTIASIQGNFAWAIPAIPFAQSHYRSLQRFYISNAQRVDFNLEAKVRLS 949
Query: 813 -TDASDVGW-------------------------------GAMVGNVSVQGVWTQAQRSW 840
+ A D+GW GA+ V+ +G WT +
Sbjct: 950 PSAALDLGWWVANIEKANGKMFFPREPDLEIFSDASLTGWGAVCNGVTTRGPWTVQDMNK 1009
Query: 841 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 900
HIN EL AI + + +N + + DN T ++Y+ K GG +S AL K +
Sbjct: 1010 HINELELLGAFFAIQTFSAQTSNIAIRIFLDNSTAVSYVNKCGGTKSAALTNTAKAISAW 1069
Query: 901 MSKLNIHIVPYFIPGKCNSLADALSR-QALIPDWHLLPSLTESVFQRW 947
+ +I + + G+ N +AD SR +A DW L ++ + + W
Sbjct: 1070 CEEKSISVEAVHLAGELNVIADRESRAEADTSDWRLDATIFSRISEIW 1117
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ NLK LN ++ + FK+ N + + ++K D+LA +DL AY + + + HR++L F +
Sbjct: 717 IVNLKPLNKFIRYQHFKMENLESVRFLVRKGDWLAKVDLKDAYFTVAVKKEHRKYLRFRW 776
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
V++ C++FGL AP+ F ++ V LR +G+R ++YLDD L+ ++
Sbjct: 777 GKRVFEFNCMAFGL--APRVFTKILKTVMAFLRRKGIRLVIYLDDILVLNE 825
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
Query: 39 ALIELKWFYHNLTGFTP--LHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHI 96
A ++L W+ N+ P P + +DAS GWGA+ V+ +G WT + HI
Sbjct: 952 AALDLGWWVANIEKANGKMFFPREPDLEIFSDASLTGWGAVCNGVTTRGPWTVQDMNKHI 1011
Query: 97 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMS 156
N EL AI + + +N + + DN T ++Y+ K GG +S AL K +
Sbjct: 1012 NELELLGAFFAIQTFSAQTSNIAIRIFLDNSTAVSYVNKCGGTKSAALTNTAKAISAWCE 1071
Query: 157 KLNIHIVPYFIPGKCNSLADALSR-QALIPDWHLLPSLTESVFQRWGIE 204
+ +I + + G+ N +AD SR +A DW L ++ + + W ++
Sbjct: 1072 EKSISVEAVHLAGELNVIADRESRAEADTSDWRLDATIFSRISEIWEMD 1120
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 12/136 (8%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
+N + + DN T ++Y+ K G +S AL K + + +I + + G+ N +
Sbjct: 1030 TSNIAIRIFLDNSTAVSYVNKCGGTKSAALTNTAKAISAWCEEKSISVEAVHLAGELNVI 1089
Query: 524 ADALSR-QALIPDWHLLPSLTESVFPRWGSRV----------VPLYVTRNPQDSKAAFID 572
AD SR +A DW L ++ + W V +P ++ PQ A +
Sbjct: 1090 ADRESRAEADTSDWRLDATIFSRISEIWEMDVDLFASSWNSQLPRFIAWGPQPGAFA-AN 1148
Query: 573 AFSRKWDFKLAWVFPP 588
AFS +W+ + FPP
Sbjct: 1149 AFSIRWENIYGYAFPP 1164
>gi|384498610|gb|EIE89101.1| hypothetical protein RO3G_13812 [Rhizopus delemar RA 99-880]
Length = 370
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 161/368 (43%), Gaps = 53/368 (14%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G +RPVFNLK LN Y+ FK+ ++ ++ N YL +IDLS A+ HI + R
Sbjct: 8 NGGIRPVFNLKKLNEYLKVPHFKMETIREGSQMIRPNAYLVSIDLSDAFLHIALHSDSRW 67
Query: 667 FLCF----------LIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLAS 716
FL P D+ S VC I +G R YLDD++LA+
Sbjct: 68 FLRLKWKNQVYQYCTTPFDLVS--SLFVFTKVCRPIL--EHFCSQGFRISAYLDDWILAA 123
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPP 776
+ ++ + LL LGW VN KKS + P+ +++ LG T + LP+ K+
Sbjct: 124 STKQLAIQRVQAVVALLQQLGWMVNFKKSVLTPTQQLERLGFVLITHTMMESLPMKKLRD 183
Query: 777 LRD-------------RLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAM 823
+R RL T+ L+ K T SD GW
Sbjct: 184 IRRSSKQVGSFAISPARLYTRYLLYYK--------------------HQTVKSDTGWRCS 223
Query: 824 VGNVSVQGVWTQAQRSWHINLKELFTVRAAISSN--PSLVANHTVVLQSDNKTVIAYIRK 881
N G W + + IN +EL A+ + P + T+++++ N T ++YI K
Sbjct: 224 WQNHRAHGYWNPIEAAQSINWRELKAAHLALKTFRVPKI---STILIRTVNATSLSYINK 280
Query: 882 QGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD-WHLLPSLT 940
QGG RS LL ++ + NI I I G N++AD SRQ + W + PS+
Sbjct: 281 QGGTRSPPLLELATEVWNWCLRHNIMIQAQHIYGIYNTIADIESRQTFFKNQWQIKPSVF 340
Query: 941 ESVFQRWG 948
E + + WG
Sbjct: 341 EELNKIWG 348
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N G+ +FNLK LN Y+ FK+ ++ ++ N YL +IDLS A+ HI + R
Sbjct: 8 NGGIRPVFNLKKLNEYLKVPHFKMETIREGSQMIRPNAYLVSIDLSDAFLHIALHSDSRW 67
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
FL +K VYQ F L S+ F ++ + +G R YLDD++LA+
Sbjct: 68 FLRLKWKNQVYQYCTTPFDLVSSLFVFTKVCRPILEHFCSQGFRISAYLDDWILAA 123
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSN--PSLVANHTVVLQS 124
T SD GW N G W + + IN +EL A+ + P + T+++++
Sbjct: 213 TVKSDTGWRCSWQNHRAHGYWNPIEAAQSINWRELKAAHLALKTFRVPKI---STILIRT 269
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 184
N T ++YI KQGG RS LL ++ + NI I I G N++AD SRQ
Sbjct: 270 VNATSLSYINKQGGTRSPPLLELATEVWNWCLRHNIMIQAQHIYGIYNTIADIESRQTFF 329
Query: 185 PD-WHLLPSLTESVFQRWG 202
+ W + PS+ E + + WG
Sbjct: 330 KNQWQIKPSVFEELNKIWG 348
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 468 TVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 527
T+++++ N T ++YI KQ G RS LL ++ + NI I I G N++AD
Sbjct: 264 TILIRTVNATSLSYINKQGGTRSPPLLELATEVWNWCLRHNIMIQAQHIYGIYNTIADIE 323
Query: 528 SRQALIPD-WHLLPSLTESVFPRWGSRVVPLYVTRNPQ 564
SRQ + W + PS+ E + WG + L+ R +
Sbjct: 324 SRQTFFKNQWQIKPSVFEELNKIWGPFTIDLFADRTTK 361
>gi|270017202|gb|EFA13648.1| hypothetical protein TcasGA2_TC015886 [Tribolium castaneum]
Length = 872
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 166/390 (42%), Gaps = 73/390 (18%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G R + NLK LN +V T FK+ +H+ + L +N ++A IDL AY IPI + HR+
Sbjct: 341 NGASRLILNLKQLNHFVETTHFKIEDHKVVCKLLSRNCFMAVIDLKDAYHLIPIQKCHRK 400
Query: 667 FLCF----------LIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLAS 716
+L F +P +S+ P + + + P + LR + ++YLDDFLL
Sbjct: 401 YLRFTFLGRLYEYTCMPFGLST-APYVFTKLMKPLVAY---LRSHNLLSVLYLDDFLLMD 456
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK--- 773
+ + I T ++L LG+ +N +KSQ+ P+ V YLG +D+ + VRLP+DK
Sbjct: 457 NSYLQSLHNISMTCKMLEGLGFLINYEKSQLTPNQTVRYLGFIYDSSNMTVRLPLDKQQC 516
Query: 774 IPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDA------------------ 815
I L +++ Q+ ++ F + P + + T +
Sbjct: 517 ITKLAKKVKRQSQCSVREFAKMIGTLVAACPAISYGQLYTKSLERAKYLALKNTHGNYSQ 576
Query: 816 ---------SDVGW-----------------------------GAMVGNVSVQGVWTQAQ 837
D+ W G G S G W + +
Sbjct: 577 IMFIPQYVREDLNWWEVHISSRKSLLPPKFVLEIFSDASLSGWGIFCGGESTHGHWNEKE 636
Query: 838 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 897
RS HIN EL + ++ V+L+ DN T +AYI + GG++ L A K++
Sbjct: 637 RSKHINFLELLAASFGLKCFAKNLSGCCVLLRIDNTTAVAYINRMGGVKHPHLHALAKEI 696
Query: 898 LLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
+ + I +I N+ AD SR+
Sbjct: 697 WQWCEERKLWIFASYIKSSHNTEADWESRR 726
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 26/207 (12%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N ++ NLK LN +V T FK+ +H+ + L +N ++A IDL AY IPI + HR+
Sbjct: 341 NGASRLILNLKQLNHFVETTHFKIEDHKVVCKLLSRNCFMAVIDLKDAYHLIPIQKCHRK 400
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
+L F + G +Y+ TC+ FGL++AP F +L + LR + ++YLDDFLL
Sbjct: 401 YLRFTFLGRLYEYTCMPFGLSTAPYVFTKLMKPLVAYLRSHNLLSVLYLDDFLL------ 454
Query: 433 VLKNQIFQTLPVNLSGNC----------SRSGRRSHPTHSL--------VANHTVVLQSD 474
+ N Q+L N+S C + + P ++ +N TV L D
Sbjct: 455 -MDNSYLQSLH-NISMTCKMLEGLGFLINYEKSQLTPNQTVRYLGFIYDSSNMTVRLPLD 512
Query: 475 NKTVITYIRKQVGLRSNALLAETKKLL 501
+ IT + K+V +S + E K++
Sbjct: 513 KQQCITKLAKKVKRQSQCSVREFAKMI 539
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%)
Query: 42 ELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKEL 101
+L W+ +++ L PP + +DAS GWG G S G W + +RS HIN EL
Sbjct: 587 DLNWWEVHISSRKSLLPPKFVLEIFSDASLSGWGIFCGGESTHGHWNEKERSKHINFLEL 646
Query: 102 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 161
+ ++ V+L+ DN T +AYI + GG++ L A K++ + +
Sbjct: 647 LAASFGLKCFAKNLSGCCVLLRIDNTTAVAYINRMGGVKHPHLHALAKEIWQWCEERKLW 706
Query: 162 IVPYFIPGKCNSLADALSRQ 181
I +I N+ AD SR+
Sbjct: 707 IFASYIKSSHNTEADWESRR 726
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
V+L+ DN T + YI + G++ L A K++ + + I +I N+ AD S
Sbjct: 665 VLLRIDNTTAVAYINRMGGVKHPHLHALAKEIWQWCEERKLWIFASYIKSSHNTEADWES 724
Query: 529 RQALIP--DWHLLPSLTESVFPRWGSRVVPLYVTRNP----------QDSKAAFIDAFSR 576
R+ L P ++ L P + + V L+ +RN +D +A +DAF+
Sbjct: 725 RR-LSPETEFELAPYAFRKICTFFQIPEVDLFASRNNTKCRRFFSWFRDPEAEVVDAFTV 783
Query: 577 KWDFKLAWVFPP 588
W + FPP
Sbjct: 784 PWTDLKFYAFPP 795
>gi|348525970|ref|XP_003450494.1| PREDICTED: hypothetical protein LOC100698500 [Oreochromis
niloticus]
Length = 1418
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 188/413 (45%), Gaps = 79/413 (19%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G +RP+ +L+ LN+Y+ T +FK++ +++ + D+ ATIDL+ AY H+ I +HR+F
Sbjct: 254 GGLRPILDLRVLNTYLRTYRFKMLTLRQLLNAVGPGDWFATIDLTDAYFHVAIHPKHRQF 313
Query: 668 LCF----------LIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQ 717
L F ++P +S + + C L LRERG+R L YLDD+ L +
Sbjct: 314 LRFAFEGVAYEYLVLPFGLSLAPRTFTK---CAEAALAP-LRERGIRILAYLDDWALVAC 369
Query: 718 DPIVLKNQI------LQTL--------------QLLTYLGWQV-NLKKSQIIPSHRVDYL 756
+ Q+ +QTL Q +++LG ++ +L + HRV
Sbjct: 370 SREQAETQLSLVLSHIQTLGFSVNFQKSSLIPSQQISFLGLEICSLSSRARLSEHRVAAF 429
Query: 757 GISWDTDLLQVRLPVDKIPPLRDRLQTQ------ALIELKWFY-----HNLTGFTPLHPP 805
L RL I L + + L++++ F H+L L
Sbjct: 430 HRCLAQFQLGRRLRFQTILRLLGMMASMIAVVPLGLLKMRAFQRWTLSHHLCASRHLRRR 489
Query: 806 VPRT-----------------------------FMSTDASDVGWGAMVGNVSVQGVWTQA 836
+P T +STDAS GWGA+ SV+G+W+ A
Sbjct: 490 LPVTASCMLALRPWREPRLLHQGSRIGRVLFCKVVSTDASLRGWGALCKGASVRGIWSTA 549
Query: 837 QRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKK 896
QR HIN EL TV A+ ++ V++++DN TV++YI +QGG RS LL ++
Sbjct: 550 QRQLHINHLELLTVFLALKHFHPVLEGQHVLVRTDNSTVVSYINRQGGTRSLPLLKLSRS 609
Query: 897 LLLIMSKLNIHIVPYFIPGKCNSLADALSRQA-LIPDWHLLPSLTESVFQRWG 948
LLL S +H + +P N D LSR L+ +W L P + ++ +G
Sbjct: 610 LLLWCS---VHFLSTHVPCHLNLGPDLLSRGGPLVREWRLHPLIVAQIWDLFG 659
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 72/114 (63%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
GL + +L+ LN+Y+ T +FK++ +++ + D+ ATIDL+ AY H+ I +HR+FL
Sbjct: 255 GLRPILDLRVLNTYLRTYRFKMLTLRQLLNAVGPGDWFATIDLTDAYFHVAIHPKHRQFL 314
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F ++G Y+ L FGL+ AP+ F + + LRERG+R L YLDD+ L +
Sbjct: 315 RFAFEGVAYEYLVLPFGLSLAPRTFTKCAEAALAPLRERGIRILAYLDDWALVA 368
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 65 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 124
+STDAS GWGA+ SV+G+W+ AQR HIN EL TV A+ ++ V++++
Sbjct: 524 VSTDASLRGWGALCKGASVRGIWSTAQRQLHINHLELLTVFLALKHFHPVLEGQHVLVRT 583
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQA-L 183
DN TV++YI +QGG RS LL ++ LLL S +H + +P N D LSR L
Sbjct: 584 DNSTVVSYINRQGGTRSLPLLKLSRSLLLWCS---VHFLSTHVPCHLNLGPDLLSRGGPL 640
Query: 184 IPDWHLLPSLTESVFQRWG 202
+ +W L P + ++ +G
Sbjct: 641 VREWRLHPLIVAQIWDLFG 659
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 461 HSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKC 520
H ++ V++++DN TV++YI +Q G RS LL ++ LLL S +H + +P
Sbjct: 571 HPVLEGQHVLVRTDNSTVVSYINRQGGTRSLPLLKLSRSLLLWCS---VHFLSTHVPCHL 627
Query: 521 NSLADALSRQA-LIPDWHLLPSLTESVFPRWGSRVVPLYVTR 561
N D LSR L+ +W L P + ++ +G + L+ +R
Sbjct: 628 NLGPDLLSRGGPLVREWRLHPLIVAQIWDLFGKPQIDLFASR 669
>gi|357613897|gb|EHJ68774.1| putative reverse transcriptase/ribonuclease H/putative
methyltransferase-like protein [Danaus plexippus]
Length = 182
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 91/156 (58%), Gaps = 1/156 (0%)
Query: 795 NLTGFTPLHPP-VPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAA 853
N+ +P+HP + + TDASD+ WGA+V N ++ W Q +WH N KE+ V A
Sbjct: 3 NICRQSPIHPKRMSTNHVITDASDIQWGALVNNEFIKDAWEHHQTNWHCNPKEMSAVLTA 62
Query: 854 ISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFI 913
IS + N T +LQ+DNKTV+ +I+ +GG RS LL T++LL ++ NI + P+ +
Sbjct: 63 ISVKAMELRNSTEILQNDNKTVVTFIKNEGGTRSRQLLELTRQLLNLVDHFNIVLSPHHL 122
Query: 914 PGKCNSLADALSRQALIPDWHLLPSLTESVFQRWGT 949
PG N+ AD LSR +WH+ T +F WGT
Sbjct: 123 PGLLNTEADRLSRNRAAVEWHIRDKETLRLFNLWGT 158
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 1/155 (0%)
Query: 49 NLTGFTPLHPP-VPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAA 107
N+ +P+HP + + TDASD+ WGA+V N ++ W Q +WH N KE+ V A
Sbjct: 3 NICRQSPIHPKRMSTNHVITDASDIQWGALVNNEFIKDAWEHHQTNWHCNPKEMSAVLTA 62
Query: 108 ISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFI 167
IS + N T +LQ+DNKTV+ +I+ +GG RS LL T++LL ++ NI + P+ +
Sbjct: 63 ISVKAMELRNSTEILQNDNKTVVTFIKNEGGTRSRQLLELTRQLLNLVDHFNIVLSPHHL 122
Query: 168 PGKCNSLADALSRQALIPDWHLLPSLTESVFQRWG 202
PG N+ AD LSR +WH+ T +F WG
Sbjct: 123 PGLLNTEADRLSRNRAAVEWHIRDKETLRLFNLWG 157
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%)
Query: 466 NHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 525
N T +LQ+DNKTV+T+I+ + G RS LL T++LL ++ NI + P+ +PG N+ AD
Sbjct: 72 NSTEILQNDNKTVVTFIKNEGGTRSRQLLELTRQLLNLVDHFNIVLSPHHLPGLLNTEAD 131
Query: 526 ALSRQALIPDWHLLPSLTESVFPRWGSRVVPLYV 559
LSR +WH+ T +F WG+ + L+
Sbjct: 132 RLSRNRAAVEWHIRDKETLRLFNLWGTPDLDLFA 165
>gi|384495518|gb|EIE86009.1| hypothetical protein RO3G_10719 [Rhizopus delemar RA 99-880]
Length = 640
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G RPVFNL++LN Y+ FK+ Q++ L +Q DY+ +IDLS A+ H+P+ HRR+
Sbjct: 362 GGCRPVFNLRALNQYIDCPHFKMETIQQVSLMVQPGDYMTSIDLSDAFLHLPVHPEHRRY 421
Query: 668 LCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRERGVRCLVYLDDFLLASQDPIV 721
L F + F+ + + P T + R++G+R YLDD++ +
Sbjct: 422 LRFYWKGSVYQFKTTPFGLSIVPYWFTKVTKPILEWARQQGIRLSAYLDDWITLGKTKAE 481
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRL 781
LQ LT LGW VNLKKSQ P+ +++LG D+ + RLP K+ LR +
Sbjct: 482 ATKHTQMILQCLTSLGWPVNLKKSQTQPTQTLEHLGFELDSQTMTARLPGKKLRDLRKSI 541
Query: 782 Q 782
Q
Sbjct: 542 Q 542
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 69/111 (62%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G +FNL++LN Y+ FK+ Q++ L +Q DY+ +IDLS A+ H+P+ HRR+L
Sbjct: 363 GCRPVFNLRALNQYIDCPHFKMETIQQVSLMVQPGDYMTSIDLSDAFLHLPVHPEHRRYL 422
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFL 425
F +KG+VYQ FGL+ P F +++ + R++G+R YLDD++
Sbjct: 423 RFYWKGSVYQFKTTPFGLSIVPYWFTKVTKPILEWARQQGIRLSAYLDDWI 473
>gi|292630533|ref|XP_002667924.1| PREDICTED: hypothetical protein LOC100333442 [Danio rerio]
Length = 762
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 162/369 (43%), Gaps = 36/369 (9%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G+G +RP+ +L+ LN V T KFK++ I LQ D+ TIDL AY HI I HR
Sbjct: 277 GEG-LRPILDLRQLNRSVQTLKFKMLTISTIMSQLQSEDWFVTIDLKDAYFHISIHPSHR 335
Query: 666 RFLCFLIPMDMSSFRP-----SLSSPGVCPTIKLG-RRLRERGVRCLVYLDDFLLASQDP 719
RFL F +R +LS + LR +G+R L YLDD+L+ ++
Sbjct: 336 RFLRFAFGGKAYQYRVLPFGLALSPRTFAKVVDAALAPLRLQGIRILNYLDDWLILARSR 395
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD 779
++L L + L Q+N KKS ++P+ +L I +++ +
Sbjct: 396 LLLVQHRGVVLTHIEKLVLQLNQKKSVLVPAQTTTFLSIRAAAKRIKLGQAITVK----- 450
Query: 780 RLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRS 839
Q Q L+ L N+ LH + ++ T + G + + QA
Sbjct: 451 --QFQKLLGLLAAASNIIPLGLLHMRPLQRWLKTRGFSLR-GNLFRTIKASRCCLQALSI 507
Query: 840 W--------------------HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI 879
W HIN E+ V A+ V H V++++D +V++YI
Sbjct: 508 WKKLWFLSQGPTLGREHHFHMHINCLEMLAVFQALRHFFPQVRGHHVLVKTDKTSVVSYI 567
Query: 880 RKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPS 938
QGGL S L K++LL + + +IPG N AD LSRQ L P W L P
Sbjct: 568 NHQGGLNSRPLCRLAKRILLWAQGRLLSLKAAYIPGPMNVGADLLSRQRLEPGGWRLHPK 627
Query: 939 LTESVFQRW 947
+ +++QR+
Sbjct: 628 VVAAIWQRF 636
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
GL + +L+ LN V T KFK++ I LQ D+ TIDL AY HI I HRR
Sbjct: 277 GEGLRPILDLRQLNRSVQTLKFKMLTISTIMSQLQSEDWFVTIDLKDAYFHISIHPSHRR 336
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
FL F + G YQ L FGLA +P+ FA++ + LR +G+R L YLDD+L+ ++ +
Sbjct: 337 FLRFAFGGKAYQYRVLPFGLALSPRTFAKVVDAALAPLRLQGIRILNYLDDWLILARSRL 396
Query: 433 VL 434
+L
Sbjct: 397 LL 398
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 95 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 154
HIN E+ V A+ V H V++++D +V++YI QGGL S L K++LL
Sbjct: 529 HINCLEMLAVFQALRHFFPQVRGHHVLVKTDKTSVVSYINHQGGLNSRPLCRLAKRILLW 588
Query: 155 MSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRW 201
+ + +IPG N AD LSRQ L P W L P + +++QR+
Sbjct: 589 AQGRLLSLKAAYIPGPMNVGADLLSRQRLEPGGWRLHPKVVAAIWQRF 636
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
V H V++++D +V++YI Q GL S L K++LL + + +IPG N
Sbjct: 549 VRGHHVLVKTDKTSVVSYINHQGGLNSRPLCRLAKRILLWAQGRLLSLKAAYIPGPMNVG 608
Query: 524 ADALSRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRNPQDSKAAF---------IDA 573
AD LSRQ L P W L P + +++ R+ + L+ + F +DA
Sbjct: 609 ADLLSRQRLEPGGWRLHPKVVAAIWQRFSKADINLFACQKTTHCPLWFSLTHPAPLGLDA 668
Query: 574 FSRKWDFKLAWVFPPPPLL 592
+KW + FPP LL
Sbjct: 669 MVQKWPRLRLYAFPPIALL 687
>gi|326676637|ref|XP_003200633.1| PREDICTED: hypothetical protein LOC100537191, partial [Danio rerio]
Length = 417
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 70/351 (19%)
Query: 614 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF--- 670
+L+ LN + F+++ ++I ++ D+ A IDL AY H+ I RHR+FL F
Sbjct: 1 LDLRILNRCLHKLPFRMLTQRRILQCVRPRDWFAAIDLKYAYFHVSILPRHRQFLRFAFE 60
Query: 671 -------LIPMDMSSFRPSLSSPGVCPTIKLGRR--LRERGVRCLVYLDDFLLAS---QD 718
++P +S SP V + G LR G+R L YLDD+L+ + +
Sbjct: 61 GRAWQYKVLPFGLSL------SPRVFTKLAEGALAPLRLTGIRILNYLDDWLILAHLREQ 114
Query: 719 PIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
IV ++++L+ L+LL G QVN +KS++ P R+ +LG+ D+ + P
Sbjct: 115 LIVHRDRVLRHLRLL---GLQVNREKSKLAPVQRISFLGMELDSITM-------NDPSF- 163
Query: 779 DRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQR 838
L PL STDAS+ GWG
Sbjct: 164 -----------------LQAGVPLGQASSHVVDSTDASNTGWG----------------- 189
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
IN EL V A+ ++ +++++D+ AYI + GG+ S + ++LL
Sbjct: 190 ---INRLELLAVFLALQRFLPVLEQQHMLVRTDSTAAAAYINRMGGMSSRRMSQLARRLL 246
Query: 899 LIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 948
L + +PG N ADALSRQ L P +W L P + ++ R+G
Sbjct: 247 LWSHPRLKSLCAIHVPGTLNRAADALSRQLLRPGEWRLHPESVQLIWARFG 297
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 143/353 (40%), Gaps = 80/353 (22%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
+L+ LN + F+++ ++I ++ D+ A IDL AY H+ I RHR+FL F ++
Sbjct: 1 LDLRILNRCLHKLPFRMLTQRRILQCVRPRDWFAAIDLKYAYFHVSILPRHRQFLRFAFE 60
Query: 380 GTVYQRTCLSFGLASAPQAFAQLS-------------------NWVA--------VLLRE 412
G +Q L FGL+ +P+ F +L+ +W+ ++ R+
Sbjct: 61 GRAWQYKVLPFGLSLSPRVFTKLAEGALAPLRLTGIRILNYLDDWLILAHLREQLIVHRD 120
Query: 413 RGVRCLVYLD----------------DFLLASQDSVVLKNQIFQTLPVNL---------S 447
R +R L L FL DS+ + + F V L S
Sbjct: 121 RVLRHLRLLGLQVNREKSKLAPVQRISFLGMELDSITMNDPSFLQAGVPLGQASSHVVDS 180
Query: 448 GNCSRSG---------------RRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNA 492
+ S +G +R P L H +V ++D+ YI + G+ S
Sbjct: 181 TDASNTGWGINRLELLAVFLALQRFLPV--LEQQHMLV-RTDSTAAAAYINRMGGMSSRR 237
Query: 493 LLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFPRWG 551
+ ++LLL + +PG N ADALSRQ L P +W L P + ++ R+G
Sbjct: 238 MSQLARRLLLWSHPRLKSLCAIHVPGTLNRAADALSRQLLRPGEWRLHPESVQLIWARFG 297
Query: 552 SRVVPLYVTRNPQDSKAAF--------IDAFSRKWDFKL-AWVFPPPPLLQVL 595
+ L+ + + F +DA + W + + FPP LL L
Sbjct: 298 EAQIDLFASPENAHCQLFFSLTEGSLGMDALAHSWPRGMRKYAFPPESLLAQL 350
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 48/238 (20%)
Query: 2 GVRCLVYLDDFLLAS---QDPIVLKNQILQTLQLL-----------------TYLAQALI 41
G+R L YLDD+L+ + + IV ++++L+ L+LL ++L +
Sbjct: 95 GIRILNYLDDWLILAHLREQLIVHRDRVLRHLRLLGLQVNREKSKLAPVQRISFLG---M 151
Query: 42 ELKWFYHNLTGF----TPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHIN 97
EL N F PL STDAS+ GWG IN
Sbjct: 152 ELDSITMNDPSFLQAGVPLGQASSHVVDSTDASNTGWG--------------------IN 191
Query: 98 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSK 157
EL V A+ ++ +++++D+ AYI + GG+ S + ++LLL
Sbjct: 192 RLELLAVFLALQRFLPVLEQQHMLVRTDSTAAAAYINRMGGMSSRRMSQLARRLLLWSHP 251
Query: 158 LNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWGIESCAALCDPES 214
+ +PG N ADALSRQ L P +W L P + ++ R+G PE+
Sbjct: 252 RLKSLCAIHVPGTLNRAADALSRQLLRPGEWRLHPESVQLIWARFGEAQIDLFASPEN 309
>gi|384486631|gb|EIE78811.1| hypothetical protein RO3G_03516 [Rhizopus delemar RA 99-880]
Length = 918
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 35/285 (12%)
Query: 593 QVLHHLNDAQGLYGDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLS 652
Q H+L+ + RP+ + + LN +V FK+ + L+K+D + IDL
Sbjct: 314 QSKHYLSHFFTVKEPTKRRPILDCRPLNKFVQCHHFKMEGIPALRSLLEKDDLICKIDLK 373
Query: 653 QAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTI--KLGRR----LRERGVRCL 706
AY +P+ ++ RRFL FL + ++ V P I KL R LR +G++ +
Sbjct: 374 DAYVVVPLHQQSRRFLTFLHQGTVYQYKSLAFGLSVAPRIFSKLMRYAVEPLRRKGIKLV 433
Query: 707 VYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ 766
YLDD L ++ + + +TL L LG+ +N KKS + P ++LG ++T +Q
Sbjct: 434 YYLDDICLVAKSMKEMNANMQETLAHLKNLGFLINYKKSSLQPQKIQEFLGFQFNTSTMQ 493
Query: 767 VRLPVDKIPPLRDRLQTQALI----------------------ELKWFYHNLTGFT---P 801
+ LP K+ + R++ + L +L+W + N +G P
Sbjct: 494 ITLPQQKLKKIVSRIRQRDLAKSLHVHHQNWESPCQLTRKSFEDLQW-WENFSGQHNGLP 552
Query: 802 LHPP---VPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHIN 843
+H P + DASD G+G + G WT+ ++S IN
Sbjct: 553 IHKEDFKTPAIDIYVDASDSGYGVSSAELETHGFWTKEEQSTSIN 597
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 73/124 (58%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ + + LN +V FK+ + L+K+D + IDL AY +P+ ++ RRFL FL+
Sbjct: 334 ILDCRPLNKFVQCHHFKMEGIPALRSLLEKDDLICKIDLKDAYVVVPLHQQSRRFLTFLH 393
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
+GTVYQ L+FGL+ AP+ F++L + LR +G++ + YLDD L ++ + +
Sbjct: 394 QGTVYQYKSLAFGLSVAPRIFSKLMRYAVEPLRRKGIKLVYYLDDICLVAKSMKEMNANM 453
Query: 439 FQTL 442
+TL
Sbjct: 454 QETL 457
>gi|327282171|ref|XP_003225817.1| PREDICTED: FYVE and coiled-coil domain-containing protein 1-like
[Anolis carolinensis]
Length = 2543
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 124/290 (42%), Gaps = 61/290 (21%)
Query: 698 LRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
LR RGV Y+DD+L+ S L I TL LL LG VN +KSQ+ P+ + ++G
Sbjct: 1581 LRLRGVTVYPYIDDWLITSDSRNQLLIDIDITLFLLQSLGLIVNKEKSQLEPTQSIQFIG 1640
Query: 758 ISWDTDLLQVRLPVDKIPPLRDRLQ--------TQALIEL-------------------- 789
D+ + LP D+ L+D +Q T I++
Sbjct: 1641 AIIDSVSQKAFLPEDRFQTLKDNIQKVILQKHITARQIQIILGHMASTTSVTPHARLHMR 1700
Query: 790 ---KWFY---------HNLTGFTPLH---------------------PPVPRTFMSTDAS 816
WF HN+ PL P P ++TD+S
Sbjct: 1701 ILQAWFLSTYNPLVHNHNIRLSFPLEVRQSLFWWTNSNNVCAGLPFKPSDPTITLTTDSS 1760
Query: 817 DVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVI 876
GWGA GN++V G+WT+ + HIN EL V A+ + + H V + +DN T
Sbjct: 1761 TQGWGAHTGNLTVHGIWTKEEAKEHINYLELLAVEKALKAFEPALTGHVVQVITDNTTTK 1820
Query: 877 AYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
Y+ KQGG S LL + +L + N+ + +PG+ N LAD LSR
Sbjct: 1821 YYLNKQGGTHSPQLLQLSVRLWNWCIERNVDLRAIHLPGEQNILADQLSR 1870
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%)
Query: 48 HNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAA 107
+N+ P P P ++TD+S GWGA GN++V G+WT+ + HIN EL V A
Sbjct: 1738 NNVCAGLPFKPSDPTITLTTDSSTQGWGAHTGNLTVHGIWTKEEAKEHINYLELLAVEKA 1797
Query: 108 ISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFI 167
+ + + H V + +DN T Y+ KQGG S LL + +L + N+ + +
Sbjct: 1798 LKAFEPALTGHVVQVITDNTTTKYYLNKQGGTHSPQLLQLSVRLWNWCIERNVDLRAIHL 1857
Query: 168 PGKCNSLADALSR 180
PG+ N LAD LSR
Sbjct: 1858 PGEQNILADQLSR 1870
>gi|301624101|ref|XP_002941349.1| PREDICTED: hypothetical protein LOC100486655 [Xenopus (Silurana)
tropicalis]
Length = 2901
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ RPV +LK LN+++ +FK+ + + + + N++L +D+ AY H+PI H +
Sbjct: 2074 DGSFRPVLDLKHLNAFIRASRFKMESLRSVIAAMNPNEFLVALDIKDAYLHVPIFPPHWK 2133
Query: 667 FLCFLIPMDMSSFRPS----LSSPGVCPTI--KLGRRLRERGVRCLVYLDDFLLASQDPI 720
FL F++ F S+P + I LR RGV YLDD LL +
Sbjct: 2134 FLRFVVKNKHFQFTALPFGLTSAPRIFTKIMSAAAASLRSRGVSITPYLDDLLLKAPSRP 2193
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKI 774
+Q + LT LGW++N+ KS++ P+ R+ +LG+ +DT +V LP +KI
Sbjct: 2194 AATSQFSLVMDTLTTLGWKINITKSRLTPAQRMPFLGMLFDTARQRVYLPPEKI 2247
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+++ +FK+ + + + + N++L +D+ AY H+PI H +FL F+
Sbjct: 2080 VLDLKHLNAFIRASRFKMESLRSVIAAMNPNEFLVALDIKDAYLHVPIFPPHWKFLRFVV 2139
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
K +Q T L FGL SAP+ F ++ + A LR RGV YLDD LL
Sbjct: 2140 KNKHFQFTALPFGLTSAPRIFTKIMSAAAASLRSRGVSITPYLDDLLL 2187
>gi|301620562|ref|XP_002939645.1| PREDICTED: e3 ubiquitin-protein ligase HUWE1-like [Xenopus (Silurana)
tropicalis]
Length = 5647
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 161/387 (41%), Gaps = 90/387 (23%)
Query: 640 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFL----------IPMDMSSFRPSLSSPGVC 689
L+ ++L ++D+ AY H+PI H++FL F +P +SS +P +
Sbjct: 1149 LEPQEFLTSLDMKDAYLHVPIHPLHQKFLRFAYHDHHYQFVALPFGLSS------APRIF 1202
Query: 690 PTI--KLGRRLRERGVRCLVYLDDFLLASQ------DPIVLKNQILQTL----------- 730
I + LR RGV YLDD L+ + + + L Q LQ
Sbjct: 1203 TKIMATMAALLRVRGVYITPYLDDLLIKAPSIHQALEDLNLSIQTLQNFGWTINRPKSCL 1262
Query: 731 ---QLLTYLGWQVNLKKSQII-PSHRVDYL-------------GISWDTDLLQVRLPVDK 773
Q + +LG ++ ++ +++ P ++ + + +L V + +
Sbjct: 1263 VPSQRIQFLGLLLDTRRGKVLLPEEKIHKTRLLVRQLKSIPKPSLRFCMKVLGVMVASTE 1322
Query: 774 IPPL------------------------RDRLQTQALIELKWFYHNLTGFTPLHPPVPRT 809
P R L TQ L L W+ TP H ++
Sbjct: 1323 AVPFAQFHLRALQRNVISEWRRHHSLNQRISLSTQTLDSLNWW------LTPPHLTQGKS 1376
Query: 810 F-------MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVA 862
F ++TDAS GWGA N+S QG+W+ A+ IN+ E+ + A++ + +
Sbjct: 1377 FADPNWQIITTDASLSGWGATFQNLSAQGLWSAAESRLPINILEIRAIFRALTHWETRLT 1436
Query: 863 NHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 922
+ +QSDN T ++Y+ +QGG RS A E K+L I IPG N AD
Sbjct: 1437 GLAIRIQSDNATAVSYLNRQGGTRSVAAAGEISKILRWAEHNVPQISAVHIPGLLNWEAD 1496
Query: 923 ALSRQALIP-DWHLLPSLTESVFQRWG 948
LSR + P +W L P + + + +WG
Sbjct: 1497 YLSRYQIDPTEWELHPEVFDLIVTQWG 1523
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 14/180 (7%)
Query: 31 QLLTYLAQALIELKWFYHNLTGFTPLHPPVPRTF-------MSTDASDVGWGAMVGNVSV 83
Q ++ Q L L W+ TP H ++F ++TDAS GWGA N+S
Sbjct: 1350 QRISLSTQTLDSLNWW------LTPPHLTQGKSFADPNWQIITTDASLSGWGATFQNLSA 1403
Query: 84 QGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHA 143
QG+W+ A+ IN+ E+ + A++ + + + +QSDN T ++Y+ +QGG RS A
Sbjct: 1404 QGLWSAAESRLPINILEIRAIFRALTHWETRLTGLAIRIQSDNATAVSYLNRQGGTRSVA 1463
Query: 144 LLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 202
E K+L I IPG N AD LSR + P +W L P + + + +WG
Sbjct: 1464 AAGEISKILRWAEHNVPQISAVHIPGLLNWEADYLSRYQIDPTEWELHPEVFDLIVTQWG 1523
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L+ ++L ++D+ AY H+PI H++FL F Y YQ L FGL+SAP+ F ++
Sbjct: 1149 LEPQEFLTSLDMKDAYLHVPIHPLHQKFLRFAYHDHHYQFVALPFGLSSAPRIFTKIMAT 1208
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
+A LLR RGV YLDD L+ +
Sbjct: 1209 MAALLRVRGVYITPYLDDLLIKA 1231
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
+ +QSDN T ++Y+ +Q G RS A E K+L I IPG N AD LS
Sbjct: 1440 IRIQSDNATAVSYLNRQGGTRSVAAAGEISKILRWAEHNVPQISAVHIPGLLNWEADYLS 1499
Query: 529 RQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRN 562
R + P +W L P + + + +WG + L +R+
Sbjct: 1500 RYQIDPTEWELHPEVFDLIVTQWGEPDLDLMASRH 1534
>gi|391332305|ref|XP_003740576.1| PREDICTED: enzymatic polyprotein-like [Metaseiulus occidentalis]
Length = 390
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 159/375 (42%), Gaps = 77/375 (20%)
Query: 642 KNDYLATIDLSQAYCHIPIARRHRRFLCF----------LIPMDMSSFRPSLSSPGVCPT 691
+N Y A IDL A+ IP+ + FL F +P + + P + + + P
Sbjct: 13 ENCYFARIDLQDAFLSIPVHESSQLFLAFHWREQMYCWSRLPFGLKT-SPRVFTKLLKPV 71
Query: 692 IKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSH 751
+ RLR+ G+ +VYLDDFLL + P L +L+T LL LG+ +N KS + P+
Sbjct: 72 VA---RLRQEGISLIVYLDDFLLIADSPSRLAVNVLRTTTLLQSLGYTINFAKSALEPAR 128
Query: 752 RVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQAL---IELKWFYHNLTGFTPLHPPVPR 808
+V YLG D +++ +P+ K +++ ++ L I L+ Y L L V
Sbjct: 129 QVTYLGYVLDASCMRLSVPLGKRIQIKEDIRHLLLLPRITLRALYRILGKLNALTTIVRS 188
Query: 809 -----------TFMSTDAS---DVG-------------WGAMVGNV-------------- 827
F +T S DV W A + N+
Sbjct: 189 LRYHCASLAKLVFETTRQSHTLDVQLRLPTATRVDLLWWEANLDNIASGPIRPPLVSLEI 248
Query: 828 ----SVQG------------VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSD 871
S++G WT + HIN EL V A+ S V++ T+ +++D
Sbjct: 249 TTDSSLEGWGAWTDGRASGGAWTYDDKRLHINALELKAVFLAVQSLAGQVSDTTIAIRTD 308
Query: 872 NKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP 931
+ + I G LRS L +++L + N+H+ IPG N +ADALSR +
Sbjct: 309 STNAMHCINNFGSLRSPKLDRLSRELRAWAFERNVHLKASHIPGVHNDIADALSRT--VW 366
Query: 932 DWHLLPSLTESVFQR 946
D H SL SVF R
Sbjct: 367 DNHSF-SLHRSVFDR 380
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 41 IELKWFYHNLTGFT--PLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINL 98
++L W+ NL P+ PP+ ++TD+S GWGA + G WT + HIN
Sbjct: 222 VDLLWWEANLDNIASGPIRPPLVSLEITTDSSLEGWGAWTDGRASGGAWTYDDKRLHINA 281
Query: 99 KELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKL 158
EL V A+ S V++ T+ +++D+ + I G LRS L +++L +
Sbjct: 282 LELKAVFLAVQSLAGQVSDTTIAIRTDSTNAMHCINNFGSLRSPKLDRLSRELRAWAFER 341
Query: 159 NIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQR 200
N+H+ IPG N +ADALSR + D H SL SVF R
Sbjct: 342 NVHLKASHIPGVHNDIADALSRT--VWDNHSF-SLHRSVFDR 380
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
+N Y A IDL A+ IP+ + FL F ++ +Y + L FGL ++P+ F +L V
Sbjct: 13 ENCYFARIDLQDAFLSIPVHESSQLFLAFHWREQMYCWSRLPFGLKTSPRVFTKLLKPVV 72
Query: 408 VLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQT 441
LR+ G+ +VYLDDFLL + L + +T
Sbjct: 73 ARLRQEGISLIVYLDDFLLIADSPSRLAVNVLRT 106
>gi|301622063|ref|XP_002940362.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Xenopus (Silurana)
tropicalis]
Length = 6288
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 143/347 (41%), Gaps = 65/347 (18%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ RPV +LK LN+++ +FK+ + + + + +++ +D+ AY HIPI H++
Sbjct: 2748 DGSFRPVLDLKHLNTFIRFARFKMESLRSVIAAMNPQEFMTAVDIKDAYLHIPIFPPHQK 2807
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI------KLGRRLRERGVRCLVYLDDFLLASQDPI 720
FL F F+ P I + LR++ + YL D L+ +
Sbjct: 2808 FLRFAFKGHHYQFQALPFGLTTAPRIFTKVMAAVTATLRKQALSVTPYL-DILIKAPSYA 2866
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD- 779
+ LQ LT L W +N KS + PS R+ +LG+++DT +V LP DKI ++
Sbjct: 2867 AAQRSRDTVLQTLTELSWTINYSKSTLTPSQRITFLGLTFDTRSQRVFLPPDKISKIQSL 2926
Query: 780 --RLQTQALIELKWFYHNLTGFTPLHPPVP------------------------------ 807
L T L +++ L VP
Sbjct: 2927 VRNLLTTPLSSVRFAMRTLGSMVASMEAVPFSQFHLRELQWNILDQWTRKSLTQTMVLRH 2986
Query: 808 -----------RTFMSTDAS--DVGWGAMVGNVSV------------QGVWTQAQRSWHI 842
+T +S S D W + + S+ QG+W+ + I
Sbjct: 2987 RTRASLRWWLHKTHLSVGKSLGDPHWLIITTDASLQGWGAVFQAQTAQGLWSHREAQLPI 3046
Query: 843 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHA 889
N+ EL V A+ + ++ + +QSDN T +AY+ QGG RS +
Sbjct: 3047 NILELRAVHRALLHWQNQLSGLPIRIQSDNATTVAYLNHQGGTRSRS 3093
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+++ +FK+ + + + + +++ +D+ AY HIPI H++FL F +
Sbjct: 2754 VLDLKHLNTFIRFARFKMESLRSVIAAMNPQEFMTAVDIKDAYLHIPIFPPHQKFLRFAF 2813
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ- 437
KG YQ L FGL +AP+ F ++ V LR++ + YLD + A + +++
Sbjct: 2814 KGHHYQFQALPFGLTTAPRIFTKVMAAVTATLRKQALSVTPYLDILIKAPSYAAAQRSRD 2873
Query: 438 -IFQTL 442
+ QTL
Sbjct: 2874 TVLQTL 2879
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 64 FMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQ 123
++TDAS GWGA+ + QG+W+ + IN+ EL V A+ + ++ + +Q
Sbjct: 3014 IITTDASLQGWGAVFQAQTAQGLWSHREAQLPINILELRAVHRALLHWQNQLSGLPIRIQ 3073
Query: 124 SDNKTVIAYIRKQGGLRSHA 143
SDN T +AY+ QGG RS +
Sbjct: 3074 SDNATTVAYLNHQGGTRSRS 3093
>gi|357631473|gb|EHJ78947.1| reverse transcriptase [Danaus plexippus]
Length = 242
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 69/100 (69%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
F+Q +D+L I++ QAY H+ +A HRRFL +YK ++Q T L G++S P+ F ++N
Sbjct: 61 FIQDHDWLVKIEIHQAYFHLLVAETHRRFLRVVYKEEIFQLTALLLGVSSVPRTFGTVTN 120
Query: 405 WVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTLPV 444
WVA +LR +G+ +VYLDDFLLA+Q+ L Q+ +TL +
Sbjct: 121 WVAEILRNQGICLVVYLDDFLLANQNRNKLIAQVAETLAI 160
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 6/147 (4%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL----SSPGVCPTIK- 693
F+Q +D+L I++ QAY H+ +A HRRFL + ++ L S P T+
Sbjct: 61 FIQDHDWLVKIEIHQAYFHLLVAETHRRFLRVVYKEEIFQLTALLLGVSSVPRTFGTVTN 120
Query: 694 -LGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHR 752
+ LR +G+ +VYLDDFLLA+Q+ L Q+ +TL +L LG +N+KKS +H+
Sbjct: 121 WVAEILRNQGICLVVYLDDFLLANQNRNKLIAQVAETLAILKSLGRYLNVKKSMTELTHK 180
Query: 753 VDYLGISWDTDLLQVRLPVDKIPPLRD 779
++YLG+ WD + LP K+ +++
Sbjct: 181 LEYLGLVWDIQSQIIALPTRKVLSIKN 207
>gi|301620378|ref|XP_002939554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Xenopus
(Silurana) tropicalis]
Length = 4555
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 17/212 (8%)
Query: 65 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 124
++TDAS GWGA++G+++ QG W A+ IN+ E+ VR A+ + + + +QS
Sbjct: 2359 LTTDASLQGWGAVMGHLTAQGTWAAAETRLPINILEIRAVRLALCHWQNRLTGCDIKVQS 2418
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 184
DN T +AY+ QGG RS L E ++L + + +IPG N AD LSRQ L
Sbjct: 2419 DNATTVAYLNHQGGTRSQQALKEVSRILTWAEAREVRLSAIYIPGLENWQADYLSRQRLD 2478
Query: 185 P-DWHLLPSLTESVFQRWGIESCAALCDPESPGQQGGIHRCLLKKVGFQASVGLPAPAST 243
P +W L P + + + QR P S G + +G ++ + LP +S
Sbjct: 2479 PGEWALNPGIFQDIMQR-----------PSSVGSGRPNNH-----MGLRSRIRLPTSSSA 2522
Query: 244 SSSIASLERRPGLICNSSSSVAEGLLVSRLEG 275
+ S + R + SS++A+ ++V R G
Sbjct: 2523 TKSHQEDQIRTMHSHSDSSTLAQKIMVYRTGG 2554
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Query: 811 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 870
++TDAS GWGA++G+++ QG W A+ IN+ E+ VR A+ + + + +QS
Sbjct: 2359 LTTDASLQGWGAVMGHLTAQGTWAAAETRLPINILEIRAVRLALCHWQNRLTGCDIKVQS 2418
Query: 871 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 930
DN T +AY+ QGG RS L E ++L + + +IPG N AD LSRQ L
Sbjct: 2419 DNATTVAYLNHQGGTRSQQALKEVSRILTWAEAREVRLSAIYIPGLENWQADYLSRQRLD 2478
Query: 931 P-DWHLLPSLTESVFQRWGTISS 952
P +W L P + + + QR ++ S
Sbjct: 2479 PGEWALNPGIFQDIMQRPSSVGS 2501
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
+ +QSDN T + Y+ Q G RS L E ++L + + +IPG N AD LS
Sbjct: 2414 IKVQSDNATTVAYLNHQGGTRSQQALKEVSRILTWAEAREVRLSAIYIPGLENWQADYLS 2473
Query: 529 RQALIP-DWHLLPSLTESVFPR 549
RQ L P +W L P + + + R
Sbjct: 2474 RQRLDPGEWALNPGIFQDIMQR 2495
>gi|170819724|gb|ACB38666.1| reverse transcriptase [Daphnia pulex]
Length = 757
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G + NLK LN ++ + FK+ N L+K D++ +DL AY IP+ H++FL
Sbjct: 177 GFRPIVNLKPLNQFIQYEHFKMENLDSARFLLRKGDWMVKLDLKDAYLTIPVHPSHQKFL 236
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F +KG ++Q CL+FGLA AP+ F ++ V LR++G+R ++YLDD L+
Sbjct: 237 RFKWKGRIFQFKCLAFGLAPAPRIFTKILKAVMGFLRKQGMRLIIYLDDILI 288
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G RP+ NLK LN ++ + FK+ N L+K D++ +DL AY IP+ H++F
Sbjct: 176 GGFRPIVNLKPLNQFIQYEHFKMENLDSARFLLRKGDWMVKLDLKDAYLTIPVHPSHQKF 235
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRR--------LRERGVRCLVYLDDFLLASQDP 719
L F + F+ + G+ P ++ + LR++G+R ++YLDD L+ ++
Sbjct: 236 LRFKWKGRIFQFK--CLAFGLAPAPRIFTKILKAVMGFLRKQGMRLIIYLDDILILNRSR 293
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD 779
Q + LL LG+ +N +K+ P+ +++YLG+ D+ L LP K ++
Sbjct: 294 EGAAKDFKQVVDLLLQLGFLINWEKTVADPAQKLEYLGLMLDSCRLSFALPSAKALAVKS 353
Query: 780 RLQTQALIE---LKWFYHNLTGFTPLHPPVP 807
++ ++ L+ + FT P +P
Sbjct: 354 MCESALAVDSISLREIASIMGNFTWAIPAIP 384
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 37 AQALIELKWFYHNLTGFTP--LHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSW 94
A A ++L+W+ +L P V + TDAS GWGA V +G WT A
Sbjct: 416 AAARLDLQWWISSLKVDRDKLFFPDVTDLEIYTDASLSGWGACCNGVRTRGSWTAADTKK 475
Query: 95 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 154
HIN EL A+ + + ++ ++ + DN T +AY+ GG RS L + +L
Sbjct: 476 HINELELVGALFAVQAFAAKSSSISIRIYLDNVTAVAYVNHCGGTRSKELTLVSAELTSW 535
Query: 155 MSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRW 201
+I I + G+ N +AD SR DW L P + E + Q W
Sbjct: 536 CEARDISIEAVHVAGRLNVIADEESRAGPDSGDWKLDPMVFERIQQLW 583
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Query: 781 LQTQALIELKWFYHNLTGFTP--LHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQR 838
L A ++L+W+ +L P V + TDAS GWGA V +G WT A
Sbjct: 414 LSAAARLDLQWWISSLKVDRDKLFFPDVTDLEIYTDASLSGWGACCNGVRTRGSWTAADT 473
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
HIN EL A+ + + ++ ++ + DN T +AY+ GG RS L + +L
Sbjct: 474 KKHINELELVGALFAVQAFAAKSSSISIRIYLDNVTAVAYVNHCGGTRSKELTLVSAELT 533
Query: 899 LIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRW 947
+I I + G+ N +AD SR DW L P + E + Q W
Sbjct: 534 SWCEARDISIEAVHVAGRLNVIADEESRAGPDSGDWKLDPMVFERIQQLW 583
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 474 DNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 533
DN T + Y+ G RS L + +L +I I + G+ N +AD SR
Sbjct: 506 DNVTAVAYVNHCGGTRSKELTLVSAELTSWCEARDISIEAVHVAGRLNVIADEESRAGPD 565
Query: 534 P-DWHLLPSLTESVFPRWGSRV----------VPLYVTRNPQDSKAAFIDAFSRKWDFKL 582
DW L P + E + W S V +P +++ PQ A +AFS W
Sbjct: 566 SGDWKLDPMVFERIQQLWPSDVDVFASPWNAHLPAFISWFPQPGAMA-TNAFSVNWKGLS 624
Query: 583 AWVFPPPPLL 592
++FPP L+
Sbjct: 625 GYIFPPFALI 634
>gi|345495977|ref|XP_001604972.2| PREDICTED: hypothetical protein LOC100121360 [Nasonia vitripennis]
Length = 1198
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 162/376 (43%), Gaps = 36/376 (9%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ R + NLK +V + FK+ + + L K D++ +DL +AY IPI +++
Sbjct: 419 DGSYRFILNLKKFKFFVKKEHFKIEDIRTAINLLNKGDFMCRLDLKEAYFLIPIHDEYKK 478
Query: 667 FLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRR----LRERGVRCLVYLDDFLL---AS 716
FL F + F LSS T K+G+ LR+ GVR ++YLDDFL+ +
Sbjct: 479 FLRFKHKNQLYQFNVLPFGLSSAPFVFT-KIGKPIVNWLRKNGVRVVIYLDDFLILGRSE 537
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP------ 770
++ N TL+L ++ ++ RV I+ +L P
Sbjct: 538 EECSFNINSADMTLELPQEKRVKIREMIDILLKMERVKVKVIAKCIGVLVAACPAVAYGW 597
Query: 771 -------VDKIPPLRDR---------LQTQALIELKWFYHN-LTGFTPLHPPVPRTFMST 813
+ K LR L +A ELKW+ L + + +
Sbjct: 598 LYYKHLELIKRNALRSNFKRMDKWITLSLEAKEELKWWQSQILIAKNKIRSSNFDLEIFS 657
Query: 814 DASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNK 873
DAS GWGA+ GN G W + +R HIN E+ A+ + N ++L+ DN
Sbjct: 658 DASTTGWGAICGNKKANGFWNREEREMHINFLEIKAAFLALKCFAAHSLNKQILLRIDNI 717
Query: 874 TVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-D 932
T +AYI K GG++ L A TK + + I I +I K N +AD SR + +
Sbjct: 718 TALAYINKMGGIKHKELHALTKVIWEWCIEREIWIFAEYIASKEN-IADEGSRITNVDTE 776
Query: 933 WHLLPSLTESVFQRWG 948
W L + + + +G
Sbjct: 777 WELANFAFQKIVKEFG 792
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L K D++ +DL +AY IPI +++FL F +K +YQ L FGL+SAP F ++
Sbjct: 452 LNKGDFMCRLDLKEAYFLIPIHDEYKKFLRFKHKNQLYQFNVLPFGLSSAPFVFTKIGKP 511
Query: 406 VAVLLRERGVRCLVYLDDFLL 426
+ LR+ GVR ++YLDDFL+
Sbjct: 512 IVNWLRKNGVRVVIYLDDFLI 532
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 126
+DAS GWGA+ GN G W + +R HIN E+ A+ + N ++L+ DN
Sbjct: 657 SDASTTGWGAICGNKKANGFWNREEREMHINFLEIKAAFLALKCFAAHSLNKQILLRIDN 716
Query: 127 KTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP- 185
T +AYI K GG++ L A TK + + I I +I K N +AD SR +
Sbjct: 717 ITALAYINKMGGIKHKELHALTKVIWEWCIEREIWIFAEYIASKEN-IADEGSRITNVDT 775
Query: 186 DWHLLPSLTESVFQRWG 202
+W L + + + +G
Sbjct: 776 EWELANFAFQKIVKEFG 792
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Query: 456 RSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYF 515
+ HSL N ++L+ DN T + YI K G++ L A TK + + I I +
Sbjct: 699 KCFAAHSL--NKQILLRIDNITALAYINKMGGIKHKELHALTKVIWEWCIEREIWIFAEY 756
Query: 516 IPGKCNSLADALSRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRN----------PQ 564
I K N +AD SR + +W L + + +G + L+ +R +
Sbjct: 757 IASKEN-IADEGSRITNVDTEWELANFAFQKIVKEFGYPSIDLFASRVNHKCKRYCSWDR 815
Query: 565 DSKAAFIDAFSRKWDFKLAWVFPPPPLL 592
D A I+AF+ W + + FPP L+
Sbjct: 816 DPDAQVINAFTVSWKEEFWYAFPPFVLI 843
>gi|270004735|gb|EFA01183.1| hypothetical protein TcasGA2_TC010509 [Tribolium castaneum]
Length = 921
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 74/126 (58%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + NLK LN ++ FK+ + + + +++N ++ATIDL AY +PI + ++
Sbjct: 416 NGSERFILNLKHLNRFLKPSHFKMEDSRTVTKLIEENIFMATIDLKDAYFLLPIRKSDKK 475
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
++ F ++ +Y+ TC+ FGL++AP AF +L V LR + C+VYLDDFL+ +
Sbjct: 476 YIRFKFREQLYEFTCMPFGLSTAPYAFTKLMKPVTSFLRIHNIVCVVYLDDFLIFGKSEQ 535
Query: 433 VLKNQI 438
+N +
Sbjct: 536 SCQNNV 541
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G+ R + NLK LN ++ FK+ + + + +++N ++ATIDL AY +PI + ++
Sbjct: 416 NGSERFILNLKHLNRFLKPSHFKMEDSRTVTKLIEENIFMATIDLKDAYFLLPIRKSDKK 475
Query: 667 FLCFLIPMDMSSFR--PSLSSPGVCPTIKLGRR----LRERGVRCLVYLDDFLLASQDPI 720
++ F + F P S KL + LR + C+VYLDDFL+ +
Sbjct: 476 YIRFKFREQLYEFTCMPFGLSTAPYAFTKLMKPVTSFLRIHNIVCVVYLDDFLIFGKSEQ 535
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDR 780
+N + + LL LG+ +N +KS PS R +LG +D+ +++ LP +K P R
Sbjct: 536 SCQNNVKTVITLLQNLGFIINFEKSNCQPSQRCKFLGFVFDSVKMRISLPREKTNPSTGR 595
Query: 781 L 781
Sbjct: 596 F 596
>gi|301632434|ref|XP_002945290.1| PREDICTED: hypothetical protein LOC100497369, partial [Xenopus
(Silurana) tropicalis]
Length = 1160
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 19/175 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ RP+ +LK LN+++ +FK+ + + + + N+YL +D+ AY H
Sbjct: 585 DGSFRPILDLKKLNTFLRFSRFKMESLRSVIAAMGHNEYLVALDIKDAYLHFTA------ 638
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI--KLGRRLRERGVRCLVYLDDFLLASQDPIVLKN 724
+P ++S +P + I + LR +GV YLDD LL + +
Sbjct: 639 -----LPFGLTS------APRIFTKIMAAVAASLRAQGVSITPYLDDLLLKAPSQSAATS 687
Query: 725 QILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD 779
Q+ LT LGW++NL+KS++ PS R+ +LG+ +DT +V LP +KI ++D
Sbjct: 688 QLELVTSTLTSLGWKINLEKSRLTPSRRMPFLGMIFDTAQQRVFLPPEKISQIQD 742
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+++ +FK+ + + + + N+YL +D+ AY H
Sbjct: 591 ILDLKKLNTFLRFSRFKMESLRSVIAAMGHNEYLVALDIKDAYLHF-------------- 636
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
T L FGL SAP+ F ++ VA LR +GV YLDD LL + +Q+
Sbjct: 637 -------TALPFGLTSAPRIFTKIMAAVAASLRAQGVSITPYLDDLLLKAPSQSAATSQL 689
>gi|17066696|gb|AAL35360.1|AF442732_3 reverse transcriptase/ribonuclease H/putative methyltransferase
[Tetraodon nigroviridis]
Length = 785
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 14/178 (7%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G ++RP+ +L+ LN ++ F+++ ++ + ++ ND+ TIDL+ AY HI I HR
Sbjct: 250 GGSSLRPILDLRVLNKHLRKYTFRMLTYKVLCSSIRPNDWFVTIDLADAYFHIAIYPAHR 309
Query: 666 RFLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
+FL F IP + S P + S V + LR G+R Y+DD+L+
Sbjct: 310 KFLRFAYQGAAYEFQRIPFGL-SLAPRVFSKCVEAALF---PLRNSGIRIFSYIDDYLVC 365
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
S + + L+ L LG+ VN KS++ PS DYLG++ ++ +VRL ++
Sbjct: 366 SHSREQVITDSVTVLRHLRNLGFTVNETKSRLEPSQYTDYLGLTLNSLSYRVRLSTER 423
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 50 LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAIS 109
LT PL R ++TDAS GWGA + + GVW+Q +HIN+ E+ V A+
Sbjct: 507 LTAGVPLGAVSSRVTLTTDASLWGWGATLSGRTANGVWSQQMAQFHINVLEMQAVFLALR 566
Query: 110 SN-PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIP 168
P L H V++++DN +V+AYI +QGG RS L ++L+L S + + +
Sbjct: 567 HFLPYLYGRH-VLVKTDNSSVVAYINRQGGTRSQQLHELARRLVLWSSSRLLSLRATHVA 625
Query: 169 GKCNSLADALSR-QALIPDWHLLPSLTESVFQRWG 202
G N AD LSR L +W L P + ++QR+G
Sbjct: 626 GVLNRGADLLSRGNPLYGEWRLHPQVVAQIWQRYG 660
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 796 LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAIS 855
LT PL R ++TDAS GWGA + + GVW+Q +HIN+ E+ V A+
Sbjct: 507 LTAGVPLGAVSSRVTLTTDASLWGWGATLSGRTANGVWSQQMAQFHINVLEMQAVFLALR 566
Query: 856 SN-PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIP 914
P L H V++++DN +V+AYI +QGG RS L ++L+L S + + +
Sbjct: 567 HFLPYLYGRH-VLVKTDNSSVVAYINRQGGTRSQQLHELARRLVLWSSSRLLSLRATHVA 625
Query: 915 GKCNSLADALSR-QALIPDWHLLPSLTESVFQRWG 948
G N AD LSR L +W L P + ++QR+G
Sbjct: 626 GVLNRGADLLSRGNPLYGEWRLHPQVVAQIWQRYG 660
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 262 SSVAEGLLVSRLEGAGNSPPNNGSRPQIASDRSSNGLLSGNDRGHDIGNLANTGLSIMFN 321
SSVA+G LE + N + ++ + G S + I + L + +
Sbjct: 203 SSVADGPSARILEEEIVTLLNKRAIRRVPDEEVCQGFYS---KYFLIPKKGGSSLRPILD 259
Query: 322 LKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGT 381
L+ LN ++ F+++ ++ + ++ ND+ TIDL+ AY HI I HR+FL F Y+G
Sbjct: 260 LRVLNKHLRKYTFRMLTYKVLCSSIRPNDWFVTIDLADAYFHIAIYPAHRKFLRFAYQGA 319
Query: 382 VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL+ AP+ F++ LR G+R Y+DD+L+ S
Sbjct: 320 AYEFQRIPFGLSLAPRVFSKCVEAALFPLRNSGIRIFSYIDDYLVCSHS 368
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
V++++DN +V+ YI +Q G RS L ++L+L S + + + G N AD LS
Sbjct: 577 VLVKTDNSSVVAYINRQGGTRSQQLHELARRLVLWSSSRLLSLRATHVAGVLNRGADLLS 636
Query: 529 R-QALIPDWHLLPSLTESVFPRWGSRVVPLYVTRN----------PQDSKAAFIDAFSRK 577
R L +W L P + ++ R+G V L+ ++ + S +DA +
Sbjct: 637 RGNPLYGEWRLHPQVVAQIWQRYGKAAVDLFASQENAHCPLFFSLAEGSAPLGVDALAHP 696
Query: 578 WDFKLAWVFPPPPLLQVLHHLNDAQGL 604
W L + FPP L+ QGL
Sbjct: 697 WPDVLLYAFPPLSLISPTLARVREQGL 723
>gi|384501405|gb|EIE91896.1| hypothetical protein RO3G_16607 [Rhizopus delemar RA 99-880]
Length = 601
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
D +R VFNLK LN Y+ FK+ +++ L + NDYL +IDLS A+ H+ + RR
Sbjct: 358 DSGIRSVFNLKRLNQYLDAPHFKMETIREVALMINPNDYLVSIDLSDAFLHVGLHPELRR 417
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI--KLGR----RLRERGVRCLVYLDDFLLASQDPI 720
FL + + + P + K+ R R +G R YL D++LA+
Sbjct: 418 FLWLKWKDQVYQYCTAAFGLSTSPFVFSKVYRPILEHFRSQGYRISAYLYDWILAANTKQ 477
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
+ Q + LL LGW +N KKS + P+ ++++L +T + LP+ ++ LR
Sbjct: 478 LAIQQAQIVVNLLQQLGWLINFKKSALTPTQQLEHLSFVLNTKTMTASLPLKELRDLR 535
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++G+ +FNLK LN Y+ FK+ +++ L + NDYL +IDLS A+ H+ + RR
Sbjct: 358 DSGIRSVFNLKRLNQYLDAPHFKMETIREVALMINPNDYLVSIDLSDAFLHVGLHPELRR 417
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
FL +K VYQ +FGL+++P F+++ + R +G R YL D++LA+
Sbjct: 418 FLWLKWKDQVYQYCTAAFGLSTSPFVFSKVYRPILEHFRSQGYRISAYLYDWILAA 473
>gi|327278553|ref|XP_003224026.1| PREDICTED: serine/threonine-protein kinase WNK2-like [Anolis
carolinensis]
Length = 2370
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 55/95 (57%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
+ DY +IDL AY H+ I + HRRFLC YQ T L FGL +AP+ F ++ VA
Sbjct: 1827 RGDYFVSIDLRDAYFHVAIRKGHRRFLCLKVLNQTYQFTVLPFGLVTAPRVFTKVVAVVA 1886
Query: 408 VLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
LR +G+ YLDD+LL D V+L+ + TL
Sbjct: 1887 AHLRLQGITVFPYLDDWLLVESDPVLLRRHVDVTL 1921
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 642 KNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFR----PSLSSPGVCPTI--KLG 695
+ DY +IDL AY H+ I + HRRFLC + F +++P V + +
Sbjct: 1827 RGDYFVSIDLRDAYFHVAIRKGHRRFLCLKVLNQTYQFTVLPFGLVTAPRVFTKVVAVVA 1886
Query: 696 RRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLG 737
LR +G+ YLDD+LL DP++L+ + TL LL LG
Sbjct: 1887 AHLRLQGITVFPYLDDWLLVESDPVLLRRHVDVTLTLLDSLG 1928
>gi|190702585|gb|ACE75468.1| reverse transcriptase and recombinase [Glyptapanteles indiensis]
Length = 1167
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
+N + NLK LN Y+ T FK+ + + + K ++ TIDL AY IPIA ++R
Sbjct: 376 SNGDYRFVLNLKDLNKYILTFHFKMEDFRTAIKLMSKGCFMGTIDLKDAYFLIPIANKYR 435
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
++L F++K +++ C+ FGL P F ++S +A LR G +VYLD +L +D
Sbjct: 436 KYLRFMWKQLLFEWACVPFGLNIGPWLFTKISKPIANFLRSLGFLSVVYLDYWLCFGRDI 495
Query: 432 VVLKNQIFQT 441
N + QT
Sbjct: 496 EECLNNLNQT 505
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+G R V NLK LN Y+ T FK+ + + + K ++ TIDL AY IPIA ++R
Sbjct: 376 SNGDYRFVLNLKDLNKYILTFHFKMEDFRTAIKLMSKGCFMGTIDLKDAYFLIPIANKYR 435
Query: 666 RFLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
++L F+ +P + + P L + P + LR G +VYLD +L
Sbjct: 436 KYLRFMWKQLLFEWACVPFGL-NIGPWLFTKISKP---IANFLRSLGFLSVVYLDYWLCF 491
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIP 775
+D N + QT Q L +G+ VN KS +P+ R +LG +L I
Sbjct: 492 GRDIEECLNNLNQTKQCLESIGFVVNKDKSTPLPNMRCQFLG----------QLIYTLIT 541
Query: 776 PLRDRLQTQALIELKWFYHNLTGFTP 801
++ L+T ++ E F N+T P
Sbjct: 542 KFKN-LKTCSIREFAQFVRNITAACP 566
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 780 RLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQR 838
+L + +L W+ N L + + +STDAS GWGA + G W +
Sbjct: 598 KLSACLITDLNWWQKNILVTANQIRQQHYKLEISTDASLTGWGAACNHELYNGAWYGEEL 657
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
++ I EL + + ++L+ DN T I+YI + GG++ +L A +++
Sbjct: 658 NYSIIHLELIAAYFGLQCFAEDKRDCEILLRIDNTTAISYINRMGGIQYPSLNAIAREIW 717
Query: 899 LIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD--WHLLPSLTESVFQRWGT 949
+ N+ I +I K N AD SR + PD W L + + + +GT
Sbjct: 718 QWCEQHNLWITASYIASKENIKADYGSR-IVNPDTEWELADWAFQRIVKNFGT 769
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 65 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 124
+STDAS GWGA + G W + ++ I EL + + ++L+
Sbjct: 630 ISTDASLTGWGAACNHELYNGAWYGEELNYSIIHLELIAAYFGLQCFAEDKRDCEILLRI 689
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 184
DN T I+YI + GG++ +L A +++ + N+ I +I K N AD SR +
Sbjct: 690 DNTTAISYINRMGGIQYPSLNAIAREIWQWCEQHNLWITASYIASKENIKADYGSR-IVN 748
Query: 185 PD--WHLLPSLTESVFQRWG 202
PD W L + + + +G
Sbjct: 749 PDTEWELADWAFQRIVKNFG 768
Score = 39.3 bits (90), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
++L+ DN T I+YI + G++ +L A +++ + N+ I +I K N AD S
Sbjct: 685 ILLRIDNTTAISYINRMGGIQYPSLNAIAREIWQWCEQHNLWITASYIASKENIKADYGS 744
Query: 529 RQALIPD--WHLLPSLTESVFPRWGSRVVPLYVTRNP----------QDSKAAFIDAFSR 576
R + PD W L + + +G+ + L+ +R +D A +DAF+
Sbjct: 745 R-IVNPDTEWELADWAFQRIVKNFGTPEIDLFASRTNRKCKKFCSWHRDPDAYCVDAFTM 803
Query: 577 KW-DFKLAWVFPPPPLL 592
D K + FPP L+
Sbjct: 804 VCTDLKF-YAFPPFSLI 819
>gi|322784671|gb|EFZ11526.1| hypothetical protein SINV_09160 [Solenopsis invicta]
Length = 328
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
Query: 783 TQALIE-LKWFYHNL-TGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSW 840
T+A IE L+W+ + G+ P+ + +D+S GWGA NV + G W++ +R
Sbjct: 120 TKAAIEDLQWWKRVVPLGYNPIRVQKFNMEIYSDSSTTGWGAYCNNVRISGFWSKKERKC 179
Query: 841 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 900
HIN EL A+ S S + + ++L+ DN T IAY+ K GG++ L +K+
Sbjct: 180 HINYLELKAAFLALQSFASELVSCEILLRLDNTTAIAYVNKAGGIKFPHLSELARKIWQW 239
Query: 901 MSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 948
K I I +IP N ADA SR I +W L + + + + +G
Sbjct: 240 CEKRKIWITASYIPSSENIEADAASRITNIDTEWELSDEIFKKIERSFG 288
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 35 YLAQALIE-LKWFYHNL-TGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQR 92
++ +A IE L+W+ + G+ P+ + +D+S GWGA NV + G W++ +R
Sbjct: 118 HITKAAIEDLQWWKRVVPLGYNPIRVQKFNMEIYSDSSTTGWGAYCNNVRISGFWSKKER 177
Query: 93 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 152
HIN EL A+ S S + + ++L+ DN T IAY+ K GG++ L +K+
Sbjct: 178 KCHINYLELKAAFLALQSFASELVSCEILLRLDNTTAIAYVNKAGGIKFPHLSELARKIW 237
Query: 153 LIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 202
K I I +IP N ADA SR I +W L + + + + +G
Sbjct: 238 QWCEKRKIWITASYIPSSENIEADAASRITNIDTEWELSDEIFKKIERSFG 288
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 444 VNLSGNCSRSGRRSHPTH--------------SLVANHTVVLQSDNKTVITYIRKQVGLR 489
V +SG S+ R+ H + S + + ++L+ DN T I Y+ K G++
Sbjct: 166 VRISGFWSKKERKCHINYLELKAAFLALQSFASELVSCEILLRLDNTTAIAYVNKAGGIK 225
Query: 490 SNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFP 548
L +K+ K I I +IP N ADA SR I +W L + + +
Sbjct: 226 FPHLSELARKIWQWCEKRKIWITASYIPSSENIEADAASRITNIDTEWELSDEIFKKIER 285
Query: 549 RWGSRVVPLYVTR-NPQ---------DSKAAFIDAFSRKWDFK 581
+G + L+ +R N + D A F+DAF+ W+ K
Sbjct: 286 SFGPFDIDLFASRLNKKCKKFCSRFPDPDATFVDAFTISWENK 328
>gi|345485146|ref|XP_003425202.1| PREDICTED: hypothetical protein LOC100121748 [Nasonia vitripennis]
Length = 678
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
R + NLK LN ++ + KL + + + + ++ +IDL AY IPI HR+FL F
Sbjct: 332 RLILNLKKLNKFIENRHLKLEDGRTVITLKSRGCFMGSIDLKDAYYLIPIHEEHRKFLRF 391
Query: 671 ----------LIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPI 720
++P +S P + + P + RR+ G+ ++YLDD L+ +Q
Sbjct: 392 QFNDQLYEYLVLPFGLS-VAPFVFTKIFKPVVSHLRRV---GILLVIYLDDILILAQSYN 447
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDR 780
I + +L LG +N KSQ+IP+ YLG +++ + V LP+DK RDR
Sbjct: 448 ECLESIRTVITVLEQLGIVINYTKSQLIPTRTCQYLGFLYNSQNMSVELPIDK----RDR 503
Query: 781 LQTQALI 787
+ ++
Sbjct: 504 QNPEQIL 510
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
+N ++ NLK LN ++ + KL + + + + ++ +IDL AY IPI HR
Sbjct: 327 SNEKSRLILNLKKLNKFIENRHLKLEDGRTVITLKSRGCFMGSIDLKDAYYLIPIHEEHR 386
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+FL F + +Y+ L FGL+ AP F ++ V LR G+ ++YLDD L+ +Q
Sbjct: 387 KFLRFQFNDQLYEYLVLPFGLSVAPFVFTKIFKPVVSHLRRVGILLVIYLDDILILAQ 444
>gi|301624526|ref|XP_002941553.1| PREDICTED: hypothetical protein LOC100487066 [Xenopus (Silurana)
tropicalis]
Length = 1511
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ NL LN +V ++FK+ + I L N +++ ID+ AY HIPI H+RFL F
Sbjct: 220 VLNLHPLNKFVRYERFKMESLPSIIRGLTPNVFMSKIDIKDAYIHIPINPFHQRFLRFTL 279
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+ YQ LSFGL SAP+ F ++ + ++R +G+ YLDD +L +Q
Sbjct: 280 GQSHYQFQALSFGLTSAPRVFTKVLGALLAVVRLQGIHVTAYLDDLILTAQ 330
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 442 LPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLL 501
+PV G R G +SH ++ H V +QSDN T + Y+ +Q G RS + L E +++
Sbjct: 489 MPVGWDGE--RPGHQSHWQAAMKGKH-VRIQSDNSTTVAYLNRQGGTRSASALREVSRIM 545
Query: 502 LIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVT 560
+ + FIPG N AD LSR L P +W L + + + +WG + + +
Sbjct: 546 TWAETHRVLLSAIFIPGIQNWEADYLSRTTLDPGEWKLKEEIFQQLVAKWGQPCLDVMAS 605
Query: 561 R-NPQ---------DSKAAFIDAFSRKWDFKLAWVFPPPPLLQVLHH 597
R N Q D +DA + W +LA+ FPP PL+ L H
Sbjct: 606 RFNSQTPRFLSKVHDPMVEGLDALTSPWHCQLAYAFPPIPLIPRLLH 652
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 120 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 179
V +QSDN T +AY+ +QGG RS + L E +++ + + FIPG N AD LS
Sbjct: 513 VRIQSDNSTTVAYLNRQGGTRSASALREVSRIMTWAETHRVLLSAIFIPGIQNWEADYLS 572
Query: 180 RQALIP-DWHLLPSLTESVFQRWG 202
R L P +W L + + + +WG
Sbjct: 573 RTTLDPGEWKLKEEIFQQLVAKWG 596
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 866 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 925
V +QSDN T +AY+ +QGG RS + L E +++ + + FIPG N AD LS
Sbjct: 513 VRIQSDNSTTVAYLNRQGGTRSASALREVSRIMTWAETHRVLLSAIFIPGIQNWEADYLS 572
Query: 926 RQALIP-DWHLLPSLTESVFQRWG 948
R L P +W L + + + +WG
Sbjct: 573 RTTLDPGEWKLKEEIFQQLVAKWG 596
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 613 VFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLI 672
V NL LN +V ++FK+ + I L N +++ ID+ AY HIPI H+RFL F +
Sbjct: 220 VLNLHPLNKFVRYERFKMESLPSIIRGLTPNVFMSKIDIKDAYIHIPINPFHQRFLRFTL 279
Query: 673 PMDMSSFRP---SLSSPGVCPTIKLGRRL---RERGVRCLVYLDDFLLASQ 717
F+ L+S T LG L R +G+ YLDD +L +Q
Sbjct: 280 GQSHYQFQALSFGLTSAPRVFTKVLGALLAVVRLQGIHVTAYLDDLILTAQ 330
>gi|345484330|ref|XP_003425006.1| PREDICTED: hypothetical protein LOC100679608 [Nasonia vitripennis]
Length = 1189
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 772 DKIPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQ 830
DK+ + DR++ EL W+ N L + + TDAS GWGA + +
Sbjct: 647 DKMMNISDRVKQ----ELFWWKENILEKIYHIKDGSFAMTIFTDASTTGWGAWNYSKKIY 702
Query: 831 GVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLR---S 887
G W+ ++ WHIN EL+T++ A+ S S V N ++L+ DN T ++Y+ K GG+R
Sbjct: 703 GFWSPDEQKWHINYLELYTIKLALESLASDVKNSQILLRVDNTTALSYVNKMGGVRFDKY 762
Query: 888 HALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQR 946
+ L E K NI I Y IP K N +AD+LSR I +W L V
Sbjct: 763 NKLAREIWKWAQFRG--NILIASY-IPTKQNVIADSLSRIKNIDIEWELNDMYFRKVVDH 819
Query: 947 WG 948
+G
Sbjct: 820 FG 821
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ R + NLK+ N V FK+ + + + N +LA+ID+ A+ IPI R+
Sbjct: 413 DGSHRFILNLKNFNKIVINHHFKIEDIKTVVQLTFPNYFLASIDIEDAFYLIPIHVESRK 472
Query: 667 FLCFLIPMDMSSFRPSLSSP-GVC--PTI------KLGRRLRERGVRCLVYLDDFLLASQ 717
FL F + + F + P G+C P I + + +R G ++YLDD L
Sbjct: 473 FLRFKVKEKIYEF---VCLPFGLCTAPLIFTKIMKVVAKYVRSLGFTSVIYLDDILCIES 529
Query: 718 DPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
K I +T+ +L +LG+++N KKS + PS +LG DT + LP +K
Sbjct: 530 SVNKCKKNINETISVLEWLGFRINYKKSNLTPSTSCQFLGFIIDTQKYAILLPNEK 585
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 126
TDAS GWGA + + G W+ ++ WHIN EL+T++ A+ S S V N ++L+ DN
Sbjct: 685 TDASTTGWGAWNYSKKIYGFWSPDEQKWHINYLELYTIKLALESLASDVKNSQILLRVDN 744
Query: 127 KTVIAYIRKQGGLR---SHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQAL 183
T ++Y+ K GG+R + L E K NI I Y IP K N +AD+LSR
Sbjct: 745 TTALSYVNKMGGVRFDKYNKLAREIWKWAQFRG--NILIASY-IPTKQNVIADSLSRIKN 801
Query: 184 IP-DWHLLPSLTESVFQRWG 202
I +W L V +G
Sbjct: 802 IDIEWELNDMYFRKVVDHFG 821
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ NLK+ N V FK+ + + + N +LA+ID+ A+ IPI R+FL F
Sbjct: 418 FILNLKNFNKIVINHHFKIEDIKTVVQLTFPNYFLASIDIEDAFYLIPIHVESRKFLRFK 477
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
K +Y+ CL FGL +AP F ++ VA +R G ++YLDD L K
Sbjct: 478 VKEKIYEFVCLPFGLCTAPLIFTKIMKVVAKYVRSLGFTSVIYLDDILCIESSVNKCKKN 537
Query: 438 IFQTLPV 444
I +T+ V
Sbjct: 538 INETISV 544
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 462 SLVANHTVVLQSDNKTVITYIRKQVGLR---SNALLAETKKLLLIMSKLNIHIVPYFIPG 518
S V N ++L+ DN T ++Y+ K G+R N L E K NI I Y IP
Sbjct: 731 SDVKNSQILLRVDNTTALSYVNKMGGVRFDKYNKLAREIWKWAQFRG--NILIASY-IPT 787
Query: 519 KCNSLADALSRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRNPQD----------SK 567
K N +AD+LSR I +W L V +G + L+ ++ S+
Sbjct: 788 KQNVIADSLSRIKNIDIEWELNDMYFRKVVDHFGQPDIDLFASKENNKCKVFVSWKPHSE 847
Query: 568 AAFIDAFSRKWDFKLAWVFPPPPLL 592
++IDAF+ W + FPP L+
Sbjct: 848 TSYIDAFTIVWTNLYFYAFPPFSLI 872
>gi|167739|gb|AAA33195.1| ORF3 [Dictyostelium discoideum]
Length = 608
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 95/178 (53%), Gaps = 14/178 (7%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G RPV +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R
Sbjct: 55 GTNLHRPVLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYR 114
Query: 666 RFLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
F+ +P +S+ P + + + P + R LR+ V + YLDD L+
Sbjct: 115 DLFRFVWKGSHYRWKTMPFGLST-APRIFTMLLRPVL---RMLRDINVSVIAYLDDLLIV 170
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
+ + +T+ LL LG+++NL+KS + P+ + +LG+ D+ +++ +P +K
Sbjct: 171 GSTKEECLSNLKKTMDLLVKLGFKLNLEKSVLEPTQSITFLGLQIDSVSMKLLVPKEK 228
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R F++
Sbjct: 62 VLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVW 121
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
KG+ Y+ + FGL++AP+ F L V +LR+ V + YLDD L+ + +
Sbjct: 122 KGSHYRWKTMPFGLSTAPRIFTMLLRPVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNL 181
Query: 439 FQTLP--VNLSGNCSRSGRRSHPTHSL---------VANHTVVLQSDNKTVITYIR 483
+T+ V L + PT S+ V+ +V + K+VI IR
Sbjct: 182 KKTMDLLVKLGFKLNLEKSVLEPTQSITFLGLQIDSVSMKLLVPKEKKKSVIKEIR 237
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 65 MSTDASDVGWGAMV--GNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 119
++TDAS+ G GA + GN ++ W+ Q + N +E+ + A + + +
Sbjct: 328 LTTDASESGAGATLKKGNKVIKTWSFQWSTTQSNMSSNRREMLALLMAYQALCRKLNSCK 387
Query: 120 VVLQSDNKTVIAYIRKQGG-LRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 178
+ +Q+DN T ++YI +QGG ++ ++L E +L K ++++ IPG N AD L
Sbjct: 388 LKIQTDNTTTLSYINRQGGQIQDLSVLFE--QLWKQCLKKKVNLIGEHIPGFFNVKADHL 445
Query: 179 SR 180
SR
Sbjct: 446 SR 447
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 811 MSTDASDVGWGAMV--GNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 865
++TDAS+ G GA + GN ++ W+ Q + N +E+ + A + + +
Sbjct: 328 LTTDASESGAGATLKKGNKVIKTWSFQWSTTQSNMSSNRREMLALLMAYQALCRKLNSCK 387
Query: 866 VVLQSDNKTVIAYIRKQGG-LRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
+ +Q+DN T ++YI +QGG ++ ++L E +L K ++++ IPG N AD L
Sbjct: 388 LKIQTDNTTTLSYINRQGGQIQDLSVLFE--QLWKQCLKKKVNLIGEHIPGFFNVKADHL 445
Query: 925 SR 926
SR
Sbjct: 446 SR 447
>gi|903714|gb|AAA70202.1| unknown protein [Dictyostelium discoideum]
Length = 608
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 95/178 (53%), Gaps = 14/178 (7%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G RPV +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R
Sbjct: 55 GTNLHRPVLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYR 114
Query: 666 RFLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
F+ +P +S+ P + + + P + R LR+ V + YLDD L+
Sbjct: 115 DLFRFVWKGSHYRWKTMPFGLST-APRIFTMLLRPVL---RMLRDINVSVIAYLDDLLIV 170
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
+ + +T+ LL LG+++NL+KS + P+ + +LG+ D+ +++ +P +K
Sbjct: 171 GSTKEECLSNLKKTMDLLVKLGFKLNLEKSVLEPTQSITFLGLQIDSVSMKLLVPKEK 228
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R F++
Sbjct: 62 VLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVW 121
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
KG+ Y+ + FGL++AP+ F L V +LR+ V + YLDD L+ + +
Sbjct: 122 KGSHYRWKTMPFGLSTAPRIFTMLLRPVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNL 181
Query: 439 FQTLP--VNLSGNCSRSGRRSHPTHSL---------VANHTVVLQSDNKTVITYIR 483
+T+ V L + PT S+ V+ +V + K+VI IR
Sbjct: 182 KKTMDLLVKLGFKLNLEKSVLEPTQSITFLGLQIDSVSMKLLVPKEKKKSVIKEIR 237
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 65 MSTDASDVGWGAMV--GNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 119
++TDAS+ G GA + GN ++ W+ Q + N +E+ + A + + N
Sbjct: 328 LTTDASESGAGATLKKGNKVIKTWSFQWSTTQSNMSSNRREMLALLMAYQALCRKLNNCK 387
Query: 120 VVLQSDNKTVIAYIRKQGG-LRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 178
+ +Q+DN T ++YI +QGG ++ ++L E +L K ++++ IPG N AD L
Sbjct: 388 LKIQTDNTTTLSYINRQGGQIQDLSVLFE--QLWKQCLKKKVNLIGEHIPGFFNVKADHL 445
Query: 179 SR 180
SR
Sbjct: 446 SR 447
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 811 MSTDASDVGWGAMV--GNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 865
++TDAS+ G GA + GN ++ W+ Q + N +E+ + A + + N
Sbjct: 328 LTTDASESGAGATLKKGNKVIKTWSFQWSTTQSNMSSNRREMLALLMAYQALCRKLNNCK 387
Query: 866 VVLQSDNKTVIAYIRKQGG-LRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
+ +Q+DN T ++YI +QGG ++ ++L E +L K ++++ IPG N AD L
Sbjct: 388 LKIQTDNTTTLSYINRQGGQIQDLSVLFE--QLWKQCLKKKVNLIGEHIPGFFNVKADHL 445
Query: 925 SR 926
SR
Sbjct: 446 SR 447
>gi|384499664|gb|EIE90155.1| hypothetical protein RO3G_14866 [Rhizopus delemar RA 99-880]
gi|384499676|gb|EIE90167.1| hypothetical protein RO3G_14878 [Rhizopus delemar RA 99-880]
Length = 190
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 634 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIK 693
+++ L+K DYL +IDLS A+ HIP+ R+FL F ++ + + G+ +
Sbjct: 5 REVAHLLRKIDYLVSIDLSDAFLHIPVHPNSRKFLRF--KWKSQVYQYTTTPFGLASVLY 62
Query: 694 LGRRL--------RERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKS 745
L ++ R +G+R YLDD++LA++ + +Q L LGW VN KKS
Sbjct: 63 LFTKICQPILEWARTQGIRVSAYLDDWILAAESKKLALQHTNMLVQQLQQLGWVVNTKKS 122
Query: 746 QIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
+ P+ ++++LG DT + LP KI LR
Sbjct: 123 VLSPTRKLEHLGFCLDTTTMTASLPAKKIRDLR 155
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%)
Query: 340 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF 399
+++ L+K DYL +IDLS A+ HIP+ R+FL F +K VYQ T FGLAS F
Sbjct: 5 REVAHLLRKIDYLVSIDLSDAFLHIPVHPNSRKFLRFKWKSQVYQYTTTPFGLASVLYLF 64
Query: 400 AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
++ + R +G+R YLDD++LA++
Sbjct: 65 TKICQPILEWARTQGIRVSAYLDDWILAAE 94
>gi|384493499|gb|EIE83990.1| hypothetical protein RO3G_08695 [Rhizopus delemar RA 99-880]
Length = 314
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
GL + N K LN ++ K FK+ QKI LQ D+L +I L A+ HI I RHR L
Sbjct: 86 GLRPVLNRKPLNRHLPIKHFKMETMQKITNLLQPGDFLTSIYLQDAFHHILIHPRHRHLL 145
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F +K YQ L FGL+ +P F ++ V R +G++ YLDD L+
Sbjct: 146 RFRWKQQTYQYRVLPFGLSLSPLIFTKVLKPVVKWARRQGIQITAYLDDLLI 197
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
DG +RPV N K LN ++ K FK+ QKI LQ D+L +I L A+ HI I RHR
Sbjct: 83 NDGGLRPVLNRKPLNRHLPIKHFKMETMQKITNLLQPGDFLTSIYLQDAFHHILIHPRHR 142
Query: 666 RFLCF----------LIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
L F ++P + S P + + + P +K RR +G++ YLDD L+
Sbjct: 143 HLLRFRWKQQTYQYRVLPFGL-SLSPLIFTKVLKPVVKWARR---QGIQITAYLDDLLIM 198
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVN 741
+ + L T +++T+LG +N
Sbjct: 199 GN---LFQQTQLFTQKMITHLGMTIN 221
>gi|66802990|ref|XP_635338.1| hypothetical protein DDB_G0291223 [Dictyostelium discoideum AX4]
gi|60463654|gb|EAL61838.1| hypothetical protein DDB_G0291223 [Dictyostelium discoideum AX4]
Length = 300
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 65/109 (59%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LNSY+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R F++
Sbjct: 127 VLDLKRLNSYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVW 186
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
KG+ Y+ + FGL++AP+ F L V +LR+ V + YLDD L+
Sbjct: 187 KGSHYRWKTMPFGLSTAPRIFTMLLRPVLRMLRDINVSVIAYLDDLLIV 235
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G RPV +LK LNSY+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R
Sbjct: 120 GTNLHRPVLDLKRLNSYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYR 179
Query: 666 RFLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
F+ +P +S+ P + + + P + R LR+ V + YLDD L+
Sbjct: 180 DLFRFVWKGSHYRWKTMPFGLST-APRIFTMLLRPVL---RMLRDINVSVIAYLDDLLIV 235
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP 770
+ + + + LL LG+++NL+KS + P+ + +LG+ D+ +++ +P
Sbjct: 236 GSTKEECLSNLKKAMDLLVKLGFKLNLEKSVLEPTQSITFLGLQIDSVSMKLLVP 290
>gi|440790615|gb|ELR11896.1| transposon Ty3-G Gag-Pol polyprotein-like family protein, putative
[Acanthamoeba castellanii str. Neff]
Length = 447
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 50/289 (17%)
Query: 706 LVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLL 765
+ Y+D+ ++ SQ ++ TL L LGW VN +KS PS ++LG+ T +
Sbjct: 1 MAYMDNVIILSQSYTEARHHTTFTLHLFKKLGWVVNTEKSDTTPSQCKEFLGLMPTTYDM 60
Query: 766 QVRLPVDKIPPLRDRLQ---------TQALI----------------------------- 787
+ + D P D+ Q T+A++
Sbjct: 61 TLTVSSD-TPRHMDQSQSVVSQGVALTRAILPAKLLLRNAYRDIGRWMSWNSSIKLSPAT 119
Query: 788 --ELKWFYHNLTGF----TPLHPPVPRTFMSTDASDVGWGAMVG--NVSVQGVWTQAQRS 839
+L+ + H L+ + T L P + T+AS GWGA ++ G W
Sbjct: 120 TNDLEEWRHGLSTWNGRITVLRPH--NIILETNASLSGWGASSSCWTLTAAGWWLSDDSK 177
Query: 840 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 899
HIN+ EL VR I + + ++++ DN +A++ GG RS A+ K++ L
Sbjct: 178 SHINVLELAVVRNTILALQLHLQGKVILMRCDNIATVAHLNHMGG-RSIAMNRVWKEIHL 236
Query: 900 IMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWG 948
+ +L+I + ++PG CNS AD LS WHL + + ++WG
Sbjct: 237 LCERLHIQLSSAYLPGLCNSEADCLSHLHPHHKWHLSREAFKLINKKWG 285
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 64 FMSTDASDVGWGAMVG--NVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 121
+ T+AS GWGA ++ G W HIN+ EL VR I + + ++
Sbjct: 146 ILETNASLSGWGASSSCWTLTAAGWWLSDDSKSHINVLELAVVRNTILALQLHLQGKVIL 205
Query: 122 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 181
++ DN +A++ GG RS A+ K++ L+ +L+I + ++PG CNS AD LS
Sbjct: 206 MRCDNIATVAHLNHMGG-RSIAMNRVWKEIHLLCERLHIQLSSAYLPGLCNSEADCLSHL 264
Query: 182 ALIPDWHLLPSLTESVFQRWGIES 205
WHL + + ++WG S
Sbjct: 265 HPHHKWHLSREAFKLINKKWGPHS 288
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
++++ DN + ++ +G RS A+ K++ L+ +L+I + ++PG CNS AD LS
Sbjct: 204 ILMRCDNIATVAHL-NHMGGRSIAMNRVWKEIHLLCERLHIQLSSAYLPGLCNSEADCLS 262
Query: 529 RQALIPDWHLLPSLTESVFPRWGSRVVPLYVTRN----PQ--------DSKAAFIDAFSR 576
WHL + + +WG + TR PQ DSKA D +
Sbjct: 263 HLHPHHKWHLSREAFKLINKKWGPHSINQTATRENRQLPQFNSRFMEADSKAT--DCLLQ 320
Query: 577 KWDFKLAWVFPPPPLLQVLHHLNDAQGLYGDGTMRPVF 614
W W PP L+ + +L + QG M P++
Sbjct: 321 DWRNDNNWTAPPIALIPHILNLVERQGATAT-IMAPIW 357
>gi|66799593|ref|XP_628722.1| hypothetical protein DDB_G0294346 [Dictyostelium discoideum AX4]
gi|60462053|gb|EAL60309.1| hypothetical protein DDB_G0294346 [Dictyostelium discoideum AX4]
Length = 541
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 65/109 (59%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R F++
Sbjct: 398 VLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVW 457
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
KG+ Y+ + FGL++AP+ F L V +LR+ V + YLDD L+
Sbjct: 458 KGSHYRWKTMPFGLSTAPRIFTMLLRHVLRMLRDINVSVIAYLDDLLIV 506
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G RPV +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R
Sbjct: 391 GTNLHRPVLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYR 450
Query: 666 RFLCFL----------IPMDMSSFRPSLSSPGVCPTI--KLGRRLRERGVRCLVYLDDFL 713
F+ +P +S ++P + + + R LR+ V + YLDD L
Sbjct: 451 DLFRFVWKGSHYRWKTMPFGLS------TAPRIFTMLLRHVLRMLRDINVSVIAYLDDLL 504
Query: 714 LA 715
+
Sbjct: 505 IV 506
>gi|66828825|ref|XP_647766.1| hypothetical protein DDB_G0267210 [Dictyostelium discoideum AX4]
gi|60475915|gb|EAL73842.1| hypothetical protein DDB_G0267210 [Dictyostelium discoideum AX4]
Length = 968
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 131/275 (47%), Gaps = 35/275 (12%)
Query: 527 LSRQALIPDWHLLPSLTESVFPRWGSRVVPLYVTRNPQDS--KAAFIDAFSRKWDFKLAW 584
L + A IP LP++ +VF R GS++ + + PQ S + SR K
Sbjct: 40 LHQVATIPS---LPTVPTTVFRRTGSKLTSRWTSVPPQTSLERIGSSKLLSRGQGPKSDC 96
Query: 585 VFPP-------PPLLQVLHHLNDAQGLYGD-------GTM--RPVFNLKSLNSYVTTKKF 628
+ + QVL + + Y + GT RPV +LK LN+Y+ + F
Sbjct: 97 ITKEVQDLLLDDAIEQVLPNRYSKRVFYSNVFTVPKPGTTLHRPVLDLKRLNTYINNQSF 156
Query: 629 KLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL----------IPMDMSS 678
K+ + +P +++ Y+ +D+ +AY H+ + ++R F+ +P +S+
Sbjct: 157 KMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKAMPFGLST 216
Query: 679 FRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGW 738
P + + + P +++ LR+ V + YLDD L+ + + +T+ LL LG+
Sbjct: 217 -APRIFTMLLRPVLRM---LRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLGF 272
Query: 739 QVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
++NL+K + P+ + +LG+ D+ +++ +P +K
Sbjct: 273 KLNLEKIVLEPTQLITFLGLQIDSVSMKLLVPKEK 307
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 65/109 (59%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R F++
Sbjct: 141 VLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVW 200
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
KG+ Y+ + FGL++AP+ F L V +LR+ V + YLDD L+
Sbjct: 201 KGSHYRWKAMPFGLSTAPRIFTMLLRPVLRMLRDINVSVIAYLDDLLIV 249
>gi|66799767|ref|XP_628809.1| hypothetical protein DDB_G0294180 [Dictyostelium discoideum AX4]
gi|60462163|gb|EAL60396.1| hypothetical protein DDB_G0294180 [Dictyostelium discoideum AX4]
Length = 558
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 65/109 (59%)
Query: 319 MFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R F++
Sbjct: 418 VLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVW 477
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
KG+ Y+ + FGL++AP+ F L V +LR+ V + YLDD L+
Sbjct: 478 KGSHYRWKTMPFGLSTAPRIFTMLLRPVLRMLRDIKVSVIAYLDDLLIV 526
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G RPV +LK LN+Y+ + FK+ + +P +++ Y+ +D+ +AY H+ + ++R
Sbjct: 411 GTNLHRPVLDLKRLNTYINNQSFKMEGIKNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYR 470
Query: 666 RFLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
F+ +P +S+ P + + + P + R LR+ V + YLDD L+
Sbjct: 471 DLFRFVWKGSHYRWKTMPFGLST-APRIFTMLLRPVL---RMLRDIKVSVIAYLDDLLIV 526
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKS 745
+ +T++LL LG+++NL+KS
Sbjct: 527 GSTKEECLSNFKKTMELLVKLGFKLNLEKS 556
>gi|327286490|ref|XP_003227963.1| PREDICTED: cadherin-related family member 2-like [Anolis
carolinensis]
Length = 2278
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ G + +L+ LN+Y+ KKF+++ I L + A+IDL AY H+ IA +H R
Sbjct: 1438 DGGQRPVLDLRGLNNYINPKKFRMVTLSTILPLLPDGAWFASIDLKDAYFHVAIAPQHHR 1497
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
+L F+ + L FG+++AP+ F ++ VA LR +G+ Y+ + A DS
Sbjct: 1498 YLAFMVAQKAFCFQVLPFGISTAPRVFTKVMAVVAAHLRLQGITVYPYI--VIGADIDST 1555
Query: 433 V----LKNQIFQTL 442
L + FQ+L
Sbjct: 1556 TGRAYLPDDRFQSL 1569
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG RPV +L+ LN+Y+ KKF+++ I L + A+IDL AY H+ IA +H R
Sbjct: 1438 DGGQRPVLDLRGLNNYINPKKFRMVTLSTILPLLPDGAWFASIDLKDAYFHVAIAPQHHR 1497
Query: 667 FLCFLI 672
+L F++
Sbjct: 1498 YLAFMV 1503
>gi|440797650|gb|ELR18732.1| reverse transcriptase, partial [Acanthamoeba castellanii str. Neff]
Length = 406
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Query: 64 FMSTDASDVGWGAMVG--NVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 121
+ T+AS GWGA ++ G W+ HIN+ +L TVR I + + ++
Sbjct: 150 ILETNASLSGWGASSSCQTLTAAGWWSSDDSKSHINILKLATVRNTILALQPHLQGKAIL 209
Query: 122 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 181
++ +N +A++ GG +S A+ K++ L+ +L+I + ++PG CNS AD LSR
Sbjct: 210 MRCNNIATVAHLNHMGG-QSVAMNRVQKEIHLLCKRLHIQLSSAYLPGLCNSEADRLSRL 268
Query: 182 ALIPDWHLLPSLTESVFQRWGIES 205
+WHL ES+ ++WG S
Sbjct: 269 HPHHEWHLSREAFESINKKWGPHS 292
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 810 FMSTDASDVGWGAMVG--NVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 867
+ T+AS GWGA ++ G W+ HIN+ +L TVR I + + ++
Sbjct: 150 ILETNASLSGWGASSSCQTLTAAGWWSSDDSKSHINILKLATVRNTILALQPHLQGKAIL 209
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
++ +N +A++ GG +S A+ K++ L+ +L+I + ++PG CNS AD LSR
Sbjct: 210 MRCNNIATVAHLNHMGG-QSVAMNRVQKEIHLLCKRLHIQLSSAYLPGLCNSEADRLSRL 268
Query: 928 ALIPDWHLLPSLTESVFQRWG 948
+WHL ES+ ++WG
Sbjct: 269 HPHHEWHLSREAFESINKKWG 289
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 468 TVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 527
++++ +N + ++ +G +S A+ K++ L+ +L+I + ++PG CNS AD L
Sbjct: 207 AILMRCNNIATVAHL-NHMGGQSVAMNRVQKEIHLLCKRLHIQLSSAYLPGLCNSEADRL 265
Query: 528 SRQALIPDWHLLPSLTESVFPRWGSRVVPLYVTRNPQ----------DSKAAFIDAFSRK 577
SR +WHL ES+ +WG + TR + ++ D +
Sbjct: 266 SRLHPHHEWHLSREAFESINKKWGPHSIDQTATRENRQLPRFNSRFMEADGEATDCLLQD 325
Query: 578 WDFKLAWVFPPPPLLQVLHHLNDAQGL 604
W W PP L+ + +L + QG+
Sbjct: 326 WRNDNNWTAPPIALIPHILNLVERQGV 352
>gi|391331107|ref|XP_003739992.1| PREDICTED: uncharacterized protein LOC100907926 [Metaseiulus
occidentalis]
Length = 416
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 42 ELKWFYHNLT--GFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLK 99
+L W+ NL P+ P+ ++TD+S GWGA G + G W ++ HIN
Sbjct: 82 DLIWWSENLDMIAVGPIKLPLVSLEITTDSSLKGWGAWCGQRASGGTWNIHDQNLHINAL 141
Query: 100 ELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLN 159
EL + A+ + T+ +++DN T + + G L S L + T+ L + N
Sbjct: 142 ELKAIFLAVQKLADDQKDTTIAIRTDNTTAMHCVNNFGSLHSSTLNSLTRSLWAWAFERN 201
Query: 160 IHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQR 200
I + IPG CN AD LSR D H SL +++F+R
Sbjct: 202 IFLKATHIPGTCNDRADLLSRTTC--DNHSF-SLHDAIFKR 239
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 788 ELKWFYHNLT--GFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLK 845
+L W+ NL P+ P+ ++TD+S GWGA G + G W ++ HIN
Sbjct: 82 DLIWWSENLDMIAVGPIKLPLVSLEITTDSSLKGWGAWCGQRASGGTWNIHDQNLHINAL 141
Query: 846 ELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLN 905
EL + A+ + T+ +++DN T + + G L S L + T+ L + N
Sbjct: 142 ELKAIFLAVQKLADDQKDTTIAIRTDNTTAMHCVNNFGSLHSSTLNSLTRSLWAWAFERN 201
Query: 906 IHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQR 946
I + IPG CN AD LSR D H SL +++F+R
Sbjct: 202 IFLKATHIPGTCNDRADLLSRTTC--DNHSF-SLHDAIFKR 239
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 468 TVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 527
T+ +++DN T + + L S+ L + T+ L + NI + IPG CN AD L
Sbjct: 161 TIAIRTDNTTAMHCVNNFGSLHSSTLNSLTRSLWAWAFERNIFLKATHIPGTCNDRADLL 220
Query: 528 SRQALIPDWHLLPSLTESVFPRWGS----------------RVVPLYVTRNPQDSKAAFI 571
SR D H SL +++F R + +++P Y++ +D A +
Sbjct: 221 SRTTC--DNHSF-SLHDAIFKRLDAAQGPFDIDLFADFTNYKIIP-YISW-IRDPFALSM 275
Query: 572 DAFSRKWD-FKLAWVFPPPPLL-QVLHHLN 599
DAF KWD + + FPP L+ + L HL+
Sbjct: 276 DAFLSKWDMWNNLYAFPPFKLVDRCLSHLD 305
>gi|357601798|gb|EHJ63156.1| hypothetical protein KGM_09197 [Danaus plexippus]
Length = 129
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 863 NHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 922
N TV+LQ+D KTV+ YI+ +GG RS LL T +LL ++ NI + +PG N+ AD
Sbjct: 5 NSTVILQNDKKTVLTYIKNEGGTRSRHLLKLTGQLLNLVDHFNIVLRLQHLPGLLNTEAD 64
Query: 923 ALSRQALIPDWHLLPSLTESVFQRWGT 949
LSR DW++ T +F WGT
Sbjct: 65 RLSRNHAAVDWYIRDEETSRLFSLWGT 91
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%)
Query: 466 NHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 525
N TV+LQ+D KTV+TYI+ + G RS LL T +LL ++ NI + +PG N+ AD
Sbjct: 5 NSTVILQNDKKTVLTYIKNEGGTRSRHLLKLTGQLLNLVDHFNIVLRLQHLPGLLNTEAD 64
Query: 526 ALSRQALIPDWHLLPSLTESVFPRWGSRVVPLYVTR 561
LSR DW++ T +F WG+ + L+ T+
Sbjct: 65 RLSRNHAAVDWYIRDEETSRLFSLWGTPDLDLFATQ 100
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 117 NHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 176
N TV+LQ+D KTV+ YI+ +GG RS LL T +LL ++ NI + +PG N+ AD
Sbjct: 5 NSTVILQNDKKTVLTYIKNEGGTRSRHLLKLTGQLLNLVDHFNIVLRLQHLPGLLNTEAD 64
Query: 177 ALSRQALIPDWHLLPSLTESVFQRWG 202
LSR DW++ T +F WG
Sbjct: 65 RLSRNHAAVDWYIRDEETSRLFSLWG 90
>gi|307197138|gb|EFN78492.1| hypothetical protein EAI_11211 [Harpegnathos saltator]
Length = 134
Score = 71.6 bits (174), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 126
+DAS+ GWGA G + W + Q+SWHIN KEL V+ A+ + S N ++L+ DN
Sbjct: 35 SDASNTGWGATDGRRKIYKFWNKEQKSWHINYKELLAVKYAVENLASERRNCRILLRVDN 94
Query: 127 KTVIAYIRKQGGLRSHAL---------LAETKKLLLIMS 156
T IAYI K G ++ AE +K++L+ S
Sbjct: 95 TTAIAYINKMGSVKFQKFNELARKIWQWAEKRKIILMAS 133
Score = 71.6 bits (174), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 813 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 872
+DAS+ GWGA G + W + Q+SWHIN KEL V+ A+ + S N ++L+ DN
Sbjct: 35 SDASNTGWGATDGRRKIYKFWNKEQKSWHINYKELLAVKYAVENLASERRNCRILLRVDN 94
Query: 873 KTVIAYIRKQGGLRSHAL---------LAETKKLLLIMS 902
T IAYI K G ++ AE +K++L+ S
Sbjct: 95 TTAIAYINKMGSVKFQKFNELARKIWQWAEKRKIILMAS 133
>gi|10058|emb|CAA43185.1| ORF2 [Panagrellus redivivus]
Length = 588
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
A+ ++ +L ++N Y+T K KL N + K+ ++ T D+ Y +A
Sbjct: 43 ADAKCRLVMDLTTVNPYITANKIKLENVAIAKSLIPKSGFMLTFDMKSGYHQARMADSEL 102
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+L F ++G + L FGL+SAP+ F +L LR GV CL+YLDD L+ S+
Sbjct: 103 IYLAFRWEGKTFWMKALPFGLSSAPEYFTKLFRHPLATLRGDGVNCLLYLDDLLVWSE 160
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 163/429 (37%), Gaps = 110/429 (25%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
D R V +L ++N Y+T K KL N + K+ ++ T D+ Y +A
Sbjct: 43 ADAKCRLVMDLTTVNPYITANKIKLENVAIAKSLIPKSGFMLTFDMKSGYHQARMADSEL 102
Query: 666 RFLCF----------LIPMDMSS--------FRPSLSSPGVCPTIKLGRRLRERGVRCLV 707
+L F +P +SS FR L++ LR GV CL+
Sbjct: 103 IYLAFRWEGKTFWMKALPFGLSSAPEYFTKLFRHPLAT------------LRGDGVNCLL 150
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQV 767
YLDD L+ S+ + L LG +N +KS + P V +LG+ ++ +
Sbjct: 151 YLDDLLVWSETYEGACEASAKVRALFGKLGVVLNNEKSSVTPQREVKWLGVVFNLTHGTL 210
Query: 768 RLPVDKI---------------PPLRDRLQ-------------TQALIELKWFYHNLTGF 799
++ ++I P +DRL+ A I K + +
Sbjct: 211 KISKNRIENALAAAARLLNRKRPSAKDRLKFTGALNSMHDVLGPMAAIRTKSLFCFIASV 270
Query: 800 TP------------------------------LHPPVPRTFM-STDASDVGWGAMVGNVS 828
TP + P ++ +TDAS G GA+ N
Sbjct: 271 TPRLGVRLALSEREKADIKYWQRNLVERNVWRIQDTRPSEYVFATDASATGVGAVKLNPK 330
Query: 829 VQGVWTQAQRSWH-------INLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRK 881
+ A R + + +EL V+ A+ + N V +++DN+ + + K
Sbjct: 331 DLTELSSAYREFDEYGGNDLEHHRELLAVQFALHHYLASKKNTVVTVRTDNQNIPRILAK 390
Query: 882 QGGLRSHALLAETKKLLLIMSKL----NIHIVPYFIPGKCNSLADALSRQALIPDWHLLP 937
G++ E +L+L +++ + ++ +IP NS AD SR+ DW
Sbjct: 391 GSGVQ------ELNELVLQVTEWCEQRKVELMTTWIPRAMNSAADRASRETDPDDW---- 440
Query: 938 SLTESVFQR 946
++++ +F++
Sbjct: 441 AISKEIFEK 449
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 466 NHTVVLQSDNKTVITYIRKQVGLRS-NALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLA 524
N V +++DN+ + + K G++ N L+ + + + + ++ +IP NS A
Sbjct: 372 NTVVTVRTDNQNIPRILAKGSGVQELNELVLQVTEWC---EQRKVELMTTWIPRAMNSAA 428
Query: 525 DALSRQALIPDWHLLPSLTESV-----------FPRWGSRVVPLYVTRNPQDSKAAFIDA 573
D SR+ DW + + E + F ++ + +++R P A ++A
Sbjct: 429 DRASRETDPDDWAISKEIFEKLTAKFQKCQCDRFASHKTKQLDKFMSRVPCPGSAG-VNA 487
Query: 574 FSRKWDFKLAWVFPPPPLL 592
F+ +W +W PPP LL
Sbjct: 488 FAYQWTDWSSWCVPPPALL 506
>gi|348531493|ref|XP_003453243.1| PREDICTED: receptor tyrosine-protein kinase erbB-4-like
[Oreochromis niloticus]
Length = 1523
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 350 DYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVL 409
D+ ATIDL+ AY H+ I +HR+FL F ++G Y+ L F L+ AP+ F + +
Sbjct: 13 DWFATIDLTDAYFHVAIHPKHRQFLRFAFEGVAYEYLVLPFELSLAPRTFTKCAEAALAP 72
Query: 410 LRERGVRCLVYLD 422
LRERG+R L YLD
Sbjct: 73 LRERGIRILAYLD 85
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 644 DYLATIDLSQAYCHIPIARRHRRFLCF----------LIPMDMSSFRPSLSSPGVCPTIK 693
D+ ATIDL+ AY H+ I +HR+FL F ++P ++S + + C
Sbjct: 13 DWFATIDLTDAYFHVAIHPKHRQFLRFAFEGVAYEYLVLPFELSLAPRTFTK---CAEAA 69
Query: 694 LGRRLRERGVRCLVYLD 710
L LRERG+R L YLD
Sbjct: 70 LA-PLRERGIRILAYLD 85
>gi|327262042|ref|XP_003215835.1| PREDICTED: LOW QUALITY PROTEIN: cation-independent
mannose-6-phosphate receptor-like [Anolis carolinensis]
Length = 2641
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 770 PVDKIPPLRDRLQTQALIELKWFYH--NLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNV 827
PV P R L + L+W+ H N+ P P T ++TDAS GWG GN+
Sbjct: 2105 PVKDSPHTRLSLPSHICHSLQWWTHRNNICVGVPFRPSDLSTTITTDASLTGWGTFSGNL 2164
Query: 828 SVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQG 883
+ G WT + + HIN+ +L + + +++N TV + +DN TV+ YI KQG
Sbjct: 2165 ATHGHWTSTEITHHINVLKLLALFKGLRVFQDILSNTTVQVCTDNTTVMWYINKQG 2220
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 9 LDDFLLASQDPIVLKNQILQTLQLLTYLAQALIELKWFYH--NLTGFTPLHPPVPRTFMS 66
L + + + DP+ K+ L L +++ +L +W+ H N+ P P T ++
Sbjct: 2095 LQAWFIKTFDPV--KDSPHTRLSLPSHICHSL---QWWTHRNNICVGVPFRPSDLSTTIT 2149
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 126
TDAS GWG GN++ G WT + + HIN+ +L + + +++N TV + +DN
Sbjct: 2150 TDASLTGWGTFSGNLATHGHWTSTEITHHINVLKLLALFKGLRVFQDILSNTTVQVCTDN 2209
Query: 127 KTVIAYIRKQG 137
TV+ YI KQG
Sbjct: 2210 TTVMWYINKQG 2220
>gi|301605299|ref|XP_002932298.1| PREDICTED: treslin-like [Xenopus (Silurana) tropicalis]
Length = 2063
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL-CF 376
++ +LK LN Y+ +KF++ + LQ+ D + T+DL AY H+PI R+FL
Sbjct: 910 LIIDLKFLNQYIRKEKFRMETIKSAINILQEGDLMVTLDLKDAYLHVPIHPLSRKFLRIA 969
Query: 377 LYKGTV---YQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+Y G Q L FG+ SA + F ++ +A R+RGV + YLDD+L+ +
Sbjct: 970 VYLGNSLHHLQFRALPFGINSATRVFTKVIVVIAAAFRQRGVFVVPYLDDWLIKA 1024
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 31/202 (15%)
Query: 567 KAAFIDAFSRKWDFKLAWVFPPPPLLQVLHHLNDAQGLYG--------DGTMRPVFNLKS 618
++A +D ++K V P PL + H +G+Y DG R + +LK
Sbjct: 870 ESAVLDVLNKK-------VLEPVPLSE--HQ----RGIYSRVFLVPKPDGRFRLIIDLKF 916
Query: 619 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMS- 677
LN Y+ +KF++ + LQ+ D + T+DL AY H+PI R+FL + + S
Sbjct: 917 LNQYIRKEKFRMETIKSAINILQEGDLMVTLDLKDAYLHVPIHPLSRKFLRIAVYLGNSL 976
Query: 678 ---SFRP------SLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQ 728
FR S + + + R+RGV + YLDD+L+ + L
Sbjct: 977 HHLQFRALPFGINSATRVFTKVIVVIAAAFRQRGVFVVPYLDDWLIKASSLTQLSRHQDL 1036
Query: 729 TLQLLTYLGWQVNLKKSQIIPS 750
+ +L+ GW +N +KS + PS
Sbjct: 1037 VISMLSSHGWIINEEKSILQPS 1058
>gi|345484016|ref|XP_003424926.1| PREDICTED: hypothetical protein LOC100677975 [Nasonia vitripennis]
Length = 791
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 30/243 (12%)
Query: 33 LTYLAQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ 91
+T +A ELKW+ L + + ++AS GWGA+ GN G W + +
Sbjct: 427 ITLSLEAKEELKWWQSQILIAKNKIRSSNFDLEIFSNASTTGWGAICGNKKANGFWNREE 486
Query: 92 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 151
R HIN E+ A+ + N ++L+ DN T +AYI K GG++ L A TK +
Sbjct: 487 REIHINFLEIKAAFLALKCFAAHSLNKQILLRIDNITALAYINKMGGIKHKELHALTKVI 546
Query: 152 LLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWGIES----- 205
+ I I +I K N +AD SR + +W L + + + +G S
Sbjct: 547 WEWCIEREIWIFAEYIASKEN-IADEGSRITNVDTEWELANFAFQKIVKEFGYPSIDLFA 605
Query: 206 ------CAALC----DPES------------PGQQGGIHRCLLKKVGFQASVGLPAPAST 243
C C DP++ PG + I + KK + ++ + + T
Sbjct: 606 SRVNHKCKRYCSWDRDPDAQETNAPTGLGPYPGGRSVIRQSFKKKNLEETTIDIMTSSIT 665
Query: 244 SSS 246
S+
Sbjct: 666 EST 668
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 781 LQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRS 839
L +A ELKW+ L + + ++AS GWGA+ GN G W + +R
Sbjct: 429 LSLEAKEELKWWQSQILIAKNKIRSSNFDLEIFSNASTTGWGAICGNKKANGFWNREERE 488
Query: 840 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 899
HIN E+ A+ + N ++L+ DN T +AYI K GG++ L A TK +
Sbjct: 489 IHINFLEIKAAFLALKCFAAHSLNKQILLRIDNITALAYINKMGGIKHKELHALTKVIWE 548
Query: 900 IMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWHLLPSLTESVFQRWG 948
+ I I +I K N +AD SR + +W L + + + +G
Sbjct: 549 WCIEREIWIFAEYIASKEN-IADEGSRITNVDTEWELANFAFQKIVKEFG 597
>gi|322784669|gb|EFZ11524.1| hypothetical protein SINV_02587 [Solenopsis invicta]
Length = 82
Score = 69.3 bits (168), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
+ + ++ ++DL AY +P+ + HR+FL F + +YQ TCL FGL+++P F +L
Sbjct: 1 MTQKAFMGSLDLKDAYHVVPVHKDHRKFLRFKFLDKLYQFTCLPFGLSTSPYVFTKLMKP 60
Query: 406 VAVLLRERGVRCLVYLDDFLL 426
V LR RG+ ++YLDD L
Sbjct: 61 VMNHLRLRGIVTVIYLDDILF 81
>gi|268571541|ref|XP_002641077.1| Hypothetical protein CBG17454 [Caenorhabditis briggsae]
Length = 1022
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 311 LANTG--LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIAR 368
+A+ G L ++ +L +LN + T +F+L + + + FL+K +Y AT D Y HI IA
Sbjct: 288 VADNGKKLRLILDLTALNKGIETPRFRLEDWRAVWSFLEKANYAATFDFKSGYHHIKIAD 347
Query: 369 RHRRFLCFLYK----GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDF 424
L F Y+ T L FGL+SAP F ++ + RE+GV+ +Y+DD
Sbjct: 348 PSSDLLAFSLSDPPLAPFYKFTALPFGLSSAPWLFTKVFRPLVGRWREKGVKIFLYIDDG 407
Query: 425 LL 426
L+
Sbjct: 408 LI 409
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 610 MRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 669
+R + +L +LN + T +F+L + + + FL+K +Y AT D Y HI IA L
Sbjct: 295 LRLILDLTALNKGIETPRFRLEDWRAVWSFLEKANYAATFDFKSGYHHIKIADPSSDLLA 354
Query: 670 FLIPMDMSSFRPSLSSPGVCPTIK---------------------LGRRLRERGVRCLVY 708
F SLS P + P K L R RE+GV+ +Y
Sbjct: 355 F-----------SLSDPPLAPFYKFTALPFGLSSAPWLFTKVFRPLVGRWREKGVKIFLY 403
Query: 709 LDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVR 768
+DD L+ ++ + + L G V +KS PS + +LGI D +R
Sbjct: 404 IDDGLILAKTREEAVEAVRLVREGLAAAGVTVEEEKSFWTPSEQFTWLGIKCDLVTKSIR 463
Query: 769 L 769
L
Sbjct: 464 L 464
>gi|384495516|gb|EIE86007.1| hypothetical protein RO3G_10717 [Rhizopus delemar RA 99-880]
Length = 264
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 68 DASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNK 127
DAS+ GWG G WT + IN +EL A+ + P L N TV++++DN
Sbjct: 38 DASNSGWGCAYLTQRAHGYWTNQEAQMSINWRELKAAFLALQAFPHLT-NTTVLIRTDNT 96
Query: 128 TVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD- 186
T +AYI KQGG +S +L+ L + + +V + N AD SR++ +
Sbjct: 97 TSLAYINKQGGTKSFSLMTLATTLWKWCLQRGLMLVSSHVSDIHNCKADYESRRSFTKNL 156
Query: 187 WHLLPSLTESVFQ-RWGIESCAALCDPES 214
W + P + S+ Q +WG D S
Sbjct: 157 WQVKPEVFNSLLQSQWGPHGVDMFADRTS 185
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Query: 814 DASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNK 873
DAS+ GWG G WT + IN +EL A+ + P L N TV++++DN
Sbjct: 38 DASNSGWGCAYLTQRAHGYWTNQEAQMSINWRELKAAFLALQAFPHLT-NTTVLIRTDNT 96
Query: 874 TVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD- 932
T +AYI KQGG +S +L+ L + + +V + N AD SR++ +
Sbjct: 97 TSLAYINKQGGTKSFSLMTLATTLWKWCLQRGLMLVSSHVSDIHNCKADYESRRSFTKNL 156
Query: 933 WHLLPSLTESVFQ-RWG 948
W + P + S+ Q +WG
Sbjct: 157 WQVKPEVFNSLLQSQWG 173
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
+ N TV++++DN T + YI KQ G +S +L+ L + + +V + N
Sbjct: 84 LTNTTVLIRTDNTTSLAYINKQGGTKSFSLMTLATTLWKWCLQRGLMLVSSHVSDIHNCK 143
Query: 524 ADALSRQALIPD-WHLLPSLTESVF-PRWGSRVVPLYVTR 561
AD SR++ + W + P + S+ +WG V ++ R
Sbjct: 144 ADYESRRSFTKNLWQVKPEVFNSLLQSQWGPHGVDMFADR 183
>gi|22415757|gb|AAM94957.1| reverse transcriptase [Volvox carteri f. nagariensis]
Length = 829
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG +R N +N ++ + K ++P +L D+L T D Y + + R
Sbjct: 265 DGKLRLCINPMYINCFLRYRPVKYERLAEVPSYLLPEDWLYTTDDKSGYWQLSLHEREHT 324
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPT--------IKLGRRLRERGVRCLVYLDDFLLASQD 718
+L + F P L G+ P +++ R LR+ GVR +DD + A+
Sbjct: 325 YLAMRW-RGQTLFWPHLPF-GLAPACHLYTSMKLEVFRPLRQLGVRMSFLIDDQMGAAGS 382
Query: 719 PIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
+ Q ++LL LG+ ++L K Q+IP RV +LG+ D + R+P DK+ R
Sbjct: 383 KAAAQFQCGAVVRLLAALGFTLSLSKCQLIPRRRVRFLGMEVDAEAQAFRVPDDKLARFR 442
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + N +N ++ + K ++P +L D+L T D Y + + R +L
Sbjct: 268 LRLCINPMYINCFLRYRPVKYERLAEVPSYLLPEDWLYTTDDKSGYWQLSLHEREHTYLA 327
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK 435
++G L FGLA A + + V LR+ GVR +DD + A+ +
Sbjct: 328 MRWRGQTLFWPHLPFGLAPACHLYTSMKLEVFRPLRQLGVRMSFLIDDQMGAAGSKAAAQ 387
Query: 436 NQ 437
Q
Sbjct: 388 FQ 389
>gi|327268405|ref|XP_003218988.1| PREDICTED: lysine-specific demethylase 6A-like [Anolis
carolinensis]
Length = 1580
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 468 TVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 527
TV +Q+DN + YI KQ G S L++ + + L ++ +V IP N LAD+L
Sbjct: 68 TVQVQTDNMVAMYYINKQDGTGSRKLMSLSTRFWLWCIAHDVFLVALHIPVLQNGLADSL 127
Query: 528 SRQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRN------------PQDSKAAFIDAF 574
SR DW L P SVF WG + L+ +R+ P + DAF
Sbjct: 128 SRMTSSSHDWQLDPETLHSVFDDWGWPTLDLFASRHNSQLPRYGARLPPAAAPGCLGDAF 187
Query: 575 SRKWDFKLAWVFPPPPLL 592
W + +VFPP PL+
Sbjct: 188 LLDWSVEPLYVFPPIPLI 205
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 119 TVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 178
TV +Q+DN + YI KQ G S L++ + + L ++ +V IP N LAD+L
Sbjct: 68 TVQVQTDNMVAMYYINKQDGTGSRKLMSLSTRFWLWCIAHDVFLVALHIPVLQNGLADSL 127
Query: 179 SRQALIP-DWHLLPSLTESVFQRWG 202
SR DW L P SVF WG
Sbjct: 128 SRMTSSSHDWQLDPETLHSVFDDWG 152
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 865 TVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
TV +Q+DN + YI KQ G S L++ + + L ++ +V IP N LAD+L
Sbjct: 68 TVQVQTDNMVAMYYINKQDGTGSRKLMSLSTRFWLWCIAHDVFLVALHIPVLQNGLADSL 127
Query: 925 SRQALIP-DWHLLPSLTESVFQRWG 948
SR DW L P SVF WG
Sbjct: 128 SRMTSSSHDWQLDPETLHSVFDDWG 152
>gi|221048148|ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
gi|219815610|gb|ACL36982.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
Length = 701
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 138/344 (40%), Gaps = 68/344 (19%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K+LN+ + + L N + I ++ Y +T+D + I + +
Sbjct: 323 GKKRLVINYKALNAATISDGYLLPNKETILTAIRGRKYFSTLDCKSGFWQIRLNENSKPL 382
Query: 668 LCFLIPMDMSSFRPS----LSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
F PM + +PG+ + +E C VY+DD L+ S+
Sbjct: 383 TAFSCPMGQYEWNVVPFGLKQAPGLFQRF-MDNSFKEYSAFCAVYVDDILVFSKTLDEHY 441
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG-------ISWDTDLLQ-VRLPVDKIP 775
+ + L+ G ++ KK+++ + +++YLG I + +L+ ++L +IP
Sbjct: 442 DHLETVLRKCIETGIILSKKKAEVAKT-KINYLGFTISNGEIELQSHILENIKLFPSRIP 500
Query: 776 ---------------------------PLRDRLQTQALIE--------LKWFYHNLTGFT 800
PL+ +L+ + E ++ F NL F
Sbjct: 501 DKKSLQRFLGILTYADQYIRKLAEWRKPLQRKLKKDTVWEWNDSDTQYVEKFKRNLKEFP 560
Query: 801 PLHPPVPRTFM--STDASDVGWGAMVGNVSVQ----------GVWTQAQRSWHINLKELF 848
LH P+P ++ TDAS W ++ + G + A+ ++H N KE+
Sbjct: 561 KLHHPLPDEYLIIETDASHEHWAGVLKSRGTDNLERLCRYTSGSFKPAEINYHSNEKEVL 620
Query: 849 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIR-------KQGGL 885
V+ I+ +A+ ++++DNK ++R KQG L
Sbjct: 621 AVKRTITKFKGYLASSEFLVRTDNKYFTYFLRTSIKDDYKQGRL 664
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 46 FYHNLTGFTPLHPPVPRTFM--STDASDVGWGAMVGNVSVQ----------GVWTQAQRS 93
F NL F LH P+P ++ TDAS W ++ + G + A+ +
Sbjct: 552 FKRNLKEFPKLHHPLPDEYLIIETDASHEHWAGVLKSRGTDNLERLCRYTSGSFKPAEIN 611
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIR-------KQGGL 139
+H N KE+ V+ I+ +A+ ++++DNK ++R KQG L
Sbjct: 612 YHSNEKEVLAVKRTITKFKGYLASSEFLVRTDNKYFTYFLRTSIKDDYKQGRL 664
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K+LN+ + + L N + I ++ Y +T+D + I + + F
Sbjct: 327 LVINYKALNAATISDGYLLPNKETILTAIRGRKYFSTLDCKSGFWQIRLNENSKPLTAFS 386
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
Y+ + FGL AP F + ++ +E C VY+DD L+ S+
Sbjct: 387 CPMGQYEWNVVPFGLKQAPGLFQR---FMDNSFKEYSAFCAVYVDDILVFSK 435
>gi|20143429|ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Figwort mosaic virus]
gi|130600|sp|P09523.1|POL_FMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
gi|58813|emb|CAA29527.1| unnamed protein product [Figwort mosaic virus]
Length = 666
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 129/343 (37%), Gaps = 66/343 (19%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N L N Q++ L+ ++ D + + + ++
Sbjct: 291 GKKRMVVNYKAINQATIGDSHNLPNMQELLTLLRGKSIFSSFDCKSGFWQVVLDEESQKL 350
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTI---KLGRRLRERGVRCLVYLDDFLLASQDPIVLKN 724
F P ++ P+I + L C+VY+DD ++ S + N
Sbjct: 351 TAFTCPQGHFQWKVVPFGLKQAPSIFQRHMQTALNGADKFCMVYVDDIIVFSNSELDHYN 410
Query: 725 QILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTD--------------------- 763
+ L+++ G ++ KK+ + ++++LG+ D
Sbjct: 411 HVYAVLKIVEKYGIILSKKKANLF-KEKINFLGLEIDKGTHCPQNHILENIHKFPDRLED 469
Query: 764 ----------LLQVRLPVDKIPPLRDRLQTQALIELKWFY------------HNLTGFTP 801
L + K+ +R LQ + ++ W + NL F
Sbjct: 470 KKHLQRFLGVLTYAETYIPKLAEIRKPLQVKLKKDVTWNWTQSDSDYVKKIKKNLGSFPK 529
Query: 802 LHPPVPRT--FMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFT 849
L+ P P + TDASD WG ++ ++ GV + QA++++H N KEL
Sbjct: 530 LYLPKPEDHLIIETDASDSFWGGVLKARALDGVELICRYSSGSFKQAEKNYHSNDKELLA 589
Query: 850 VRAAISSNPSLVANHTVVLQSDNKTVIAYIR-------KQGGL 885
V+ I+ + + +++DNK ++R KQG L
Sbjct: 590 VKQVITKFSAYLTPVRFTVRTDNKNFTYFLRINLKGDSKQGRL 632
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 49 NLTGFTPLHPPVPRT--FMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHI 96
NL F L+ P P + TDASD WG ++ ++ GV + QA++++H
Sbjct: 523 NLGSFPKLYLPKPEDHLIIETDASDSFWGGVLKARALDGVELICRYSSGSFKQAEKNYHS 582
Query: 97 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIR-------KQGGL 139
N KEL V+ I+ + + +++DNK ++R KQG L
Sbjct: 583 NDKELLAVKQVITKFSAYLTPVRFTVRTDNKNFTYFLRINLKGDSKQGRL 632
>gi|327267666|ref|XP_003218620.1| PREDICTED: hypothetical protein LOC100555260 [Anolis carolinensis]
Length = 658
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 65 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 124
++TDAS +GWGA + N++ G W+ ++ HIN EL + A+ S L N + L +
Sbjct: 511 LTTDASTLGWGAHLQNLTAHGRWSTQEQKLHINALELLAMEKAMKSFTRLTENQVIQLVT 570
Query: 125 DNKTVIAYIRKQG 137
DN TV AYI ++G
Sbjct: 571 DNTTVKAYINREG 583
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 811 MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 870
++TDAS +GWGA + N++ G W+ ++ HIN EL + A+ S L N + L +
Sbjct: 511 LTTDASTLGWGAHLQNLTAHGRWSTQEQKLHINALELLAMEKAMKSFTRLTENQVIQLVT 570
Query: 871 DNKTVIAYIRKQG 883
DN TV AYI ++G
Sbjct: 571 DNTTVKAYINREG 583
>gi|384484648|gb|EIE76828.1| hypothetical protein RO3G_01532 [Rhizopus delemar RA 99-880]
Length = 234
Score = 62.8 bits (151), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
++K+DY+ IDL AY +PI + FL FL++G +Y L+F L AP+ F+++ +
Sbjct: 11 IEKDDYICKIDLKDAYVVVPIHESSKDFLTFLHQGIIYIYRSLAFRLNIAPRIFSKIMKY 70
Query: 406 VAVLLRERGVRCLVYLDDFLLASQDSVVLK------NQIFQTLPVNLSGNCSRSGRRSHP 459
LR+ G+R + YL D + S+ Q+ Q ++ S + + S R +
Sbjct: 71 ALEPLRKIGLRFVFYLYDICVDQIRSISPATIASWIQQVMQDADIDTSIHKAHSLRAAAS 130
Query: 460 THSLVANHTV 469
T +++ H +
Sbjct: 131 TWAVIHGHNI 140
>gi|348540901|ref|XP_003457925.1| PREDICTED: uncharacterized protein K02A2.6-like [Oreochromis
niloticus]
Length = 1250
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 132/341 (38%), Gaps = 62/341 (18%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG RP + + LN+ ++ + + Q L + IDL + Y +P+
Sbjct: 491 DGRWRPCGDFRRLNNVTENDRYPIPHIQDFSTHLTGTSIFSKIDLVRGYHQVPVRAEDVP 550
Query: 667 FLCFLIPMDMSSFRPSLSSP-GVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIV 721
+ P + F L P G+ T + +RL + +R L VYLDD L+AS
Sbjct: 551 KTAAITPFGLFEF---LHMPFGLNGTAQTFQRLMDSVLRGLPFVFVYLDDILVASCSESQ 607
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDR 780
+ + Q Q L G VN K Q +P +D+LG R+ D + PL D+
Sbjct: 608 HASHLRQVFQRLAAHGLIVNPSKCQFGLPI--LDFLG---------NRISADGVVPLPDK 656
Query: 781 LQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWT------ 834
++ AL ++DASDV GA++ V GVW
Sbjct: 657 VRAIAL-------------------------TSDASDVAVGAVLEQ-QVSGVWQPLAFFS 690
Query: 835 ----QAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHAL 890
++R + + +EL + A + + D+K + + K S
Sbjct: 691 RTLRDSERKYSVFDRELLALHLATRHFRFFLEGRSFTAYVDHKPLTFAMSKF----SDQW 746
Query: 891 LAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP 931
++ L +S+ I + GK N +AD LSR + P
Sbjct: 747 SGRQQRQLAAISEFTTDI--QHVAGKSNCVADCLSRALVSP 785
>gi|66828689|ref|XP_647698.1| hypothetical protein DDB_G0267338 [Dictyostelium discoideum AX4]
gi|60475843|gb|EAL73775.1| hypothetical protein DDB_G0267338 [Dictyostelium discoideum AX4]
Length = 161
Score = 62.0 bits (149), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 340 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF 399
+ +P +++ Y+ +D+ +AY H+ + ++R F++KG+ Y+ + FGL++AP+ F
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIF 64
Query: 400 AQLSNWVAVLLRERGVRCLVYLDDFLL 426
L V +LR+ V + YLDD L+
Sbjct: 65 TMLLRHVLRMLRDINVSVIAYLDDLLI 91
Score = 56.2 bits (134), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 634 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTI- 692
+ +P +++ Y+ +D+ +AY H+ + ++R F+ ++ P I
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIF 64
Query: 693 -----KLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQI 747
+ R LR+ V + YLDD L+ + + +T+ LL LG+++NL+K +
Sbjct: 65 TMLLRHVLRMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLGFKLNLEKIVL 124
Query: 748 IPSHRVDYLGISWDTDLLQVRLPVDK 773
P+ + +LG+ D+ +++ +P +K
Sbjct: 125 EPTQSITFLGLQIDSKSMKLLVPKEK 150
>gi|66828855|ref|XP_647781.1| hypothetical protein DDB_G0267240 [Dictyostelium discoideum AX4]
gi|60475930|gb|EAL73857.1| hypothetical protein DDB_G0267240 [Dictyostelium discoideum AX4]
Length = 818
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 52/87 (59%)
Query: 340 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF 399
+ +P +++ Y+ +D+ +AY H+ + ++R F++KG+ Y+ + FGL++AP+ F
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIF 64
Query: 400 AQLSNWVAVLLRERGVRCLVYLDDFLL 426
L V +LR+ V + YLDD L+
Sbjct: 65 TMLLRPVLRMLRDINVSVIAYLDDLLI 91
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 634 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL----------IPMDMSSFRPSL 683
+ +P +++ Y+ +D+ +AY H+ + ++R F+ +P +S+ P +
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLST-APRI 63
Query: 684 SSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLK 743
+ + P +++ LR+ V + YLDD L+ + + +T+ LL LG+++NL+
Sbjct: 64 FTMLLRPVLRM---LRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLGFKLNLE 120
Query: 744 KSQIIPSHRVDYL 756
KS + P+ + +L
Sbjct: 121 KSVLEPTQSITFL 133
>gi|313244785|emb|CBY15491.1| unnamed protein product [Oikopleura dioica]
Length = 724
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L++ D LA D + Y +P+A ++ CF + G V++ L+FGL +AP + QL N
Sbjct: 209 LLKRGDLLAKFDDKKGYHQMPLAAESKKMACFKWGGHVFENNILAFGLPAAPGQY-QLLN 267
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR G++ +YLDD LL
Sbjct: 268 SVGINFLRRNGIKITLYLDDRLL 290
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCF-----LIPMDMSSFRPSLSSPGVCPTIK 693
L++ D LA D + Y +P+A ++ CF + ++ +F ++PG +
Sbjct: 209 LLKRGDLLAKFDDKKGYHQMPLAAESKKMACFKWGGHVFENNILAFGLP-AAPGQYQLLN 267
Query: 694 -LG-RRLRERGVRCLVYLDDFLLA------SQDPIVLKNQIL-----QTLQLLTYLGWQV 740
+G LR G++ +YLDD LL Q +LK +++ L +G V
Sbjct: 268 SVGINFLRRNGIKITLYLDDRLLVVTPESEEQRQKLLKEEVICKEVWVVAATLVAMGGFV 327
Query: 741 NLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRL---QTQALIELK 790
N++KS+ P+ R+++LG DT+ V +P + L+ R+ Q++ +ELK
Sbjct: 328 NIEKSEFKPTQRIEFLGFILDTEKETVEIPKGRWQVLKKRIREAQSEPTVELK 380
>gi|307183886|gb|EFN70496.1| hypothetical protein EAG_00458 [Camponotus floridanus]
Length = 240
Score = 61.2 bits (147), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 42 ELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKE 100
+ W+ N L P+ PV + +DAS GWG + G W HINL E
Sbjct: 10 DFTWWKKNILFARAPMIEPVYNLEIFSDASRTGWGVFCESQRSHGYWKAEDLELHINLLE 69
Query: 101 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 160
L + S + ++L+ DN T IAYI + R L +++ + I
Sbjct: 70 LMAAFFGLKCFASNKRHCNILLRLDNTTAIAYINRMRDSRYEGLSTLAREIWQWCEQREI 129
Query: 161 HIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQR 200
I +IP K N+ AD SR+ L P+ L S FQ+
Sbjct: 130 WITASYIPSKENAEADYESRK-LQPETEF--ELDNSAFQK 166
Score = 61.2 bits (147), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 788 ELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKE 846
+ W+ N L P+ PV + +DAS GWG + G W HINL E
Sbjct: 10 DFTWWKKNILFARAPMIEPVYNLEIFSDASRTGWGVFCESQRSHGYWKAEDLELHINLLE 69
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
L + S + ++L+ DN T IAYI + R L +++ + I
Sbjct: 70 LMAAFFGLKCFASNKRHCNILLRLDNTTAIAYINRMRDSRYEGLSTLAREIWQWCEQREI 129
Query: 907 HIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQR 946
I +IP K N+ AD SR+ L P+ L S FQ+
Sbjct: 130 WITASYIPSKENAEADYESRK-LQPETEF--ELDNSAFQK 166
Score = 46.2 bits (108), Expect = 0.094, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
++L+ DN T I YI + R L +++ + I I +IP K N+ AD S
Sbjct: 89 ILLRLDNTTAIAYINRMRDSRYEGLSTLAREIWQWCEQREIWITASYIPSKENAEADYES 148
Query: 529 RQALIP--DWHLLPSLTESVFPRWGSRVVPLYVTR----------NPQDSKAAFIDAFSR 576
R+ L P ++ L S + + +G + L+ +R + +DS + IDAF
Sbjct: 149 RK-LQPETEFELDNSAFQKIVKVFGQPEIDLFASRANAKCRRYVSSRKDSGSIAIDAFIL 207
Query: 577 KWDFKLAWVFPP-PPLLQVLHHL 598
+W L + FPP +L+VL +
Sbjct: 208 EWKRFLFYAFPPFSVILKVLRKI 230
>gi|410492647|ref|YP_006907834.1| polyprotein [Horseradish latent virus]
gi|57790326|gb|AAW56089.1| polyprotein [Horseradish latent virus]
Length = 679
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 148/405 (36%), Gaps = 112/405 (27%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + +
Sbjct: 298 GKKRMVVNYKAMNDATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVRLDEESKSL 357
Query: 668 LCF----------LIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQ 717
F ++P M PS+ + K+ R+ C +Y+DD L+ S
Sbjct: 358 TAFTCPQGHYEWNVVPFGMKQ-APSIFQRHMDEAFKVFRKF------CCIYVDDILVFSD 410
Query: 718 DPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT--------------- 762
+ + + LQ G ++ KK+Q+ R+++LG+ D
Sbjct: 411 NEQNHQLHVAMILQKCYQHGIILSKKKAQLF-KERINFLGLEIDQGTHRPQSHILEHIQK 469
Query: 763 --DLLQVRLPV-----------DKIPPL---RDRLQTQALIELKWFY------------H 794
D+++ +L + D IP L R LQ + ++W +
Sbjct: 470 FPDIIESKLQLQRFLGVLTYASDYIPKLAQIRKPLQAKLKENVQWRWTPEDTLYMKKVKK 529
Query: 795 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ---------------GVWTQAQ 837
NL GF PLH P+P + + TDASD WG ++ + + G + A+
Sbjct: 530 NLNGFPPLHHPLPEEKLIIETDASDNYWGGILKAIHIDLSTNESIELVCRYASGSFKPAE 589
Query: 838 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAY---------------IRKQ 882
+++H N KE V I + ++++DN T Y IR Q
Sbjct: 590 QNYHSNDKETLAVIRTIQKFSIYLTPVRFLVRTDN-THFKYFLNINYKGDSKMGRNIRWQ 648
Query: 883 GGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
G L+++ + I G N LAD LSR+
Sbjct: 649 GWLQNYVFDVD------------------HIKGTNNCLADFLSRE 675
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 51/171 (29%)
Query: 43 LKWFYHNLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ---------------G 85
+K NL GF PLH P+P + + TDASD WG ++ + + G
Sbjct: 524 MKKVKKNLNGFPPLHHPLPEEKLIIETDASDNYWGGILKAIHIDLSTNESIELVCRYASG 583
Query: 86 VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAY------------- 132
+ A++++H N KE V I + ++++DN T Y
Sbjct: 584 SFKPAEQNYHSNDKETLAVIRTIQKFSIYLTPVRFLVRTDN-THFKYFLNINYKGDSKMG 642
Query: 133 --IRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 181
IR QG L+++ + I G N LAD LSR+
Sbjct: 643 RNIRWQGWLQNYVFDVD------------------HIKGTNNCLADFLSRE 675
>gi|313219624|emb|CBY30545.1| unnamed protein product [Oikopleura dioica]
Length = 631
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
LQK D +A D + Y +P+A ++ CF + +++ L+FG+ +AP + QL N
Sbjct: 116 MLQKGDVMAKFDDKKGYHQMPLAAESKKMACFKWGNYIFENNILAFGIPAAPGMY-QLLN 174
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR+ G++ +YLDD LL
Sbjct: 175 SVGINFLRQNGIKITLYLDDRLL 197
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCF-----LIPMDMSSFRPSLSSPGVCPTIK 693
LQK D +A D + Y +P+A ++ CF + ++ +F ++PG+ +
Sbjct: 116 MLQKGDVMAKFDDKKGYHQMPLAAESKKMACFKWGNYIFENNILAFGIP-AAPGMYQLLN 174
Query: 694 -LG-RRLRERGVRCLVYLDDFLL----ASQD-------PIVLKNQILQTLQLLTYLGWQV 740
+G LR+ G++ +YLDD LL S++ +L ++ L LG V
Sbjct: 175 SVGINFLRQNGIKITLYLDDRLLIISPKSENHRKKLLTEEILCKEVWLVAATLVALGGFV 234
Query: 741 NLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRL---QTQALIELK 790
N+KKS+ P+ R+++LG DT+ V +P + L+ R+ ++ ++ELK
Sbjct: 235 NIKKSEFKPTQRIEFLGFILDTNKETVEIPEGRWNTLKKRMRDAESGKMVELK 287
>gi|301611041|ref|XP_002935061.1| PREDICTED: hypothetical protein LOC100489410 [Xenopus (Silurana)
tropicalis]
Length = 952
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 64 FMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQ 123
++TDAS GWGA++ ++S QG W++ + IN+ E+ VR A+ L A + +Q
Sbjct: 708 LLTTDASLSGWGAVLDHLSAQGTWSKTEALLPINILEIRAVRLALLHWQHLQA---IKVQ 764
Query: 124 SDNKTVIAYIRKQGGLRSHALLAETKKLL 152
SDN T +AY+ QGG +S L E +L
Sbjct: 765 SDNATTVAYLNHQGGTQSCQALREVSLIL 793
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 810 FMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQ 869
++TDAS GWGA++ ++S QG W++ + IN+ E+ VR A+ L A + +Q
Sbjct: 708 LLTTDASLSGWGAVLDHLSAQGTWSKTEALLPINILEIRAVRLALLHWQHLQA---IKVQ 764
Query: 870 SDNKTVIAYIRKQGGLRSHALLAETKKLL 898
SDN T +AY+ QGG +S L E +L
Sbjct: 765 SDNATTVAYLNHQGGTQSCQALREVSLIL 793
>gi|313232917|emb|CBY09600.1| unnamed protein product [Oikopleura dioica]
Length = 724
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
LQK D +A D + Y +P+A ++ CF + +++ L+FG+ +AP + QL N
Sbjct: 209 MLQKGDVMAKFDDKKGYHQMPLAAESKKMACFKWGNYIFENNILAFGIPAAPGMY-QLLN 267
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR+ G++ +YLDD LL
Sbjct: 268 SVGINFLRQNGIKITLYLDDRLL 290
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCF-----LIPMDMSSFRPSLSSPGVCPTIK 693
LQK D +A D + Y +P+A ++ CF + ++ +F ++PG+ +
Sbjct: 209 MLQKGDVMAKFDDKKGYHQMPLAAESKKMACFKWGNYIFENNILAFGIP-AAPGMYQLLN 267
Query: 694 -LG-RRLRERGVRCLVYLDDFLL----ASQD-------PIVLKNQILQTLQLLTYLGWQV 740
+G LR+ G++ +YLDD LL S++ +L ++ L LG V
Sbjct: 268 SVGINFLRQNGIKITLYLDDRLLIISPKSENHRKKLLTEEILCKEVWLVAATLVALGGFV 327
Query: 741 NLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRL---QTQALIELK 790
N+KKS+ P+ R+++LG DT+ V +P + L+ R+ ++ ++ELK
Sbjct: 328 NIKKSEFKPTQRIEFLGFILDTNKETVEIPEGRWNTLKKRMRDAESGKMVELK 380
>gi|66828741|ref|XP_647724.1| hypothetical protein DDB_G0267326 [Dictyostelium discoideum AX4]
gi|60475869|gb|EAL73800.1| hypothetical protein DDB_G0267326 [Dictyostelium discoideum AX4]
Length = 818
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 340 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF 399
+ +P +++ Y+ +D+ +AY H+ + ++R F++KG+ Y+ + FGL++AP+ F
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIF 64
Query: 400 AQLSNWVAVLLRERGVRCLVYLDDFLL 426
L +LR+ V + YLDD L+
Sbjct: 65 TMLLRPALRMLRDINVSVIAYLDDLLI 91
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 634 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL----------IPMDMSSFRPSL 683
+ +P +++ Y+ +D+ +AY H+ + ++R F+ +P +S+ P +
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLST-APRI 63
Query: 684 SSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLK 743
+ + P +++ LR+ V + YLDD L+ + + +T+ LL LG+++NL+
Sbjct: 64 FTMLLRPALRM---LRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMNLLVKLGFKLNLE 120
Query: 744 KSQIIPSHRVDYL 756
KS + P+ + L
Sbjct: 121 KSVLEPTQSITLL 133
>gi|326537262|ref|YP_004300274.1| replicase [Sweet potato vein clearing virus]
gi|325698381|gb|ADZ45064.1| replicase [Sweet potato vein clearing virus]
Length = 619
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 150/387 (38%), Gaps = 77/387 (19%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V + ++LN+ T + L N +Q ++ + D + H+ + +
Sbjct: 242 GKSRMVIDYRNLNAKTKTYNYPLPNKILRVRQVQGYNWFSKFDCKSGFYHLKLTEESKHL 301
Query: 668 LCFLIPMDMSSFRPSL----SSPG--VCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIV 721
F +P F + ++PG C +L C+VY+DD LL S+
Sbjct: 302 SAFNVPQGFYEFNVLMFGYKNAPGRYQCYMDSYFSKLE----NCIVYIDDILLYSKTKDE 357
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD-----------TDLLQVRLP 770
+ + + ++ G ++ KK+ II +++++LGI D T ++Q
Sbjct: 358 HETLLKKFYHIVKEAGVSLSEKKA-IIGVNQIEFLGIEIDKSGVKMQNHIVTKIVQCEEV 416
Query: 771 VDKIPPLR-----------------------------------DRLQTQALIELKWFYHN 795
+D L+ D + L ++K N
Sbjct: 417 LDTKKKLQSFLGLINQVREYVPNIAKELLFLQKKLKKDVEYHFDSQDQEKLKKIKEKCSN 476
Query: 796 LTGFTPLHPPVPRTF---MSTDASDVGWGAMVGNVSVQ-----------GVWTQAQRSWH 841
L L P + F + TDAS++ +G ++ Q G + +++W
Sbjct: 477 LPKL--LFPDETKQFDWIVETDASEISYGGVLKYKYHQDKIEYHCRYYSGTFKDNEKNWE 534
Query: 842 INLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIM 901
IN KEL +V + + + + +L++DN V ++ G L + E ++L++ +
Sbjct: 535 INRKELLSVFKCLYAFEPYIVYNKFILRTDNTQVKYWL--TGKLDNSVTTKEIRRLVVKI 592
Query: 902 SKLNIHIVPYFIPGKCNSLADALSRQA 928
+ N +V I K N AD LSR+
Sbjct: 593 NCYNFDVV--VIKSKDNCFADYLSREV 617
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 56 LHPPVPRTF---MSTDASDVGWGAMVGNVSVQ-----------GVWTQAQRSWHINLKEL 101
L P + F + TDAS++ +G ++ Q G + +++W IN KEL
Sbjct: 481 LFPDETKQFDWIVETDASEISYGGVLKYKYHQDKIEYHCRYYSGTFKDNEKNWEINRKEL 540
Query: 102 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 161
+V + + + + +L++DN V ++ G L + E ++L++ ++ N
Sbjct: 541 LSVFKCLYAFEPYIVYNKFILRTDNTQVKYWL--TGKLDNSVTTKEIRRLVVKINCYNFD 598
Query: 162 IVPYFIPGKCNSLADALSRQA 182
+V I K N AD LSR+
Sbjct: 599 VV--VIKSKDNCFADYLSREV 617
>gi|384499005|gb|EIE89496.1| hypothetical protein RO3G_14207 [Rhizopus delemar RA 99-880]
Length = 374
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 37/267 (13%)
Query: 39 ALIELKWFYHNLT--GFTPLHPPVPRTFMST-----DASDVGWGAMVGNVSVQGVWTQAQ 91
+L +L+W+ LT P+H P++ T DAS+ GWG + G WT+ +
Sbjct: 104 SLQDLQWWEKWLTINNGLPIHLTPPKSLTPTLTIHVDASNTGWGVKSNVMETSGFWTEEE 163
Query: 92 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 151
+ IN++EL T+ A+ + N T+ + SDNKT + Y + + T
Sbjct: 164 KETSINVRELQTIYFALKLHARNAKNSTIHIFSDNKTALKYSYSGNQEYTSRPIESTSN- 222
Query: 152 LLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWGIESCAALCD 211
S L + + C+ + + +R I D +E++ +
Sbjct: 223 ----SALRMETTKEMVQKNCSQMGSSFNR--CICD--ETKQASENILEL----------- 263
Query: 212 PESPGQQGGIHRCLLKKVGFQASVGLPAPASTSSSIASLERRPGLICNSSSSVAEGLLV- 270
G G +C+ + F+ S+ P + IASL+ ++ ++ +G ++
Sbjct: 264 --DAGSGGSGDKCIQSDLAFERSISKPTLEINTQGIASLQETGNTRSSTGNTTMDGSILV 321
Query: 271 ----SRLEGAGNSPPNNGSRPQIASDR 293
+ EG NS N ++ ++ S R
Sbjct: 322 PNGTTDDEGTTNS---NETKQEVVSSR 345
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 781 LQTQALIELKWFYHNLT--GFTPLHPPVPRTFMST-----DASDVGWGAMVGNVSVQGVW 833
L T +L +L+W+ LT P+H P++ T DAS+ GWG + G W
Sbjct: 100 LSTHSLQDLQWWEKWLTINNGLPIHLTPPKSLTPTLTIHVDASNTGWGVKSNVMETSGFW 159
Query: 834 TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAY 878
T+ ++ IN++EL T+ A+ + N T+ + SDNKT + Y
Sbjct: 160 TEEEKETSINVRELQTIYFALKLHARNAKNSTIHIFSDNKTALKY 204
>gi|427781365|gb|JAA56134.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1057
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 143/383 (37%), Gaps = 72/383 (18%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG RP + ++LN ++ + + + FL + IDL +AY IP+A
Sbjct: 242 DGDWRPCGDYRALNRVTVPDRYPVPHIHDMTSFLHGATIFSKIDLVRAYHQIPVAPEDIP 301
Query: 667 FLCFLIPMDMSSFRPSLSSP-GVCPTIKLGRRLRERGVR----CLVYLDDFLLASQDPIV 721
P M F L P G+ + +R + VR C VYLDD L+AS P
Sbjct: 302 KTAITTPFGMFEF---LRMPFGLRNAGQTFQRFMDGVVRGLDFCKVYLDDLLIASSTPEE 358
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQI-IPS-----HRVDYLGISWDTDLLQV--RLPVDK 773
+ + LQ LT G +N K +P+ H + G+ D ++ + P K
Sbjct: 359 HERHLRYVLQRLTENGIVINTAKCVFGVPTLSFLGHSISSAGVQPQKDKVEAVRQFPQPK 418
Query: 774 ------------------IP-------PLRDRL---------------QTQALIELKWFY 793
IP PL L TQA +K
Sbjct: 419 NLRQLREFLGLVNFYRRFIPKCANILHPLHSLLAASGSKATAIQWNDQSTQAFRMIKEAL 478
Query: 794 HNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVW----------TQAQRSWHIN 843
N T T VP+ M DASD A++ V GVW + ++R +
Sbjct: 479 ANATMLTYPQLGVPQCVM-VDASDAAIRAVLQQ-RVSGVWRPISFFSTKLSPSERRYSTF 536
Query: 844 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSK 903
+EL + AAI V + +D+K + +R +H +A + + +++
Sbjct: 537 GRELLAIYAAIRHFRHYVEGQEFFVLTDHKPLTYALRANSDSGAH--VARELRQMSYIAE 594
Query: 904 LNIHIVPYFIPGKCNSLADALSR 926
I + G N+ ADALSR
Sbjct: 595 FTTDI--RHVSGTDNAAADALSR 615
>gi|66828719|ref|XP_647713.1| hypothetical protein DDB_G0267304 [Dictyostelium discoideum AX4]
gi|60475858|gb|EAL73789.1| hypothetical protein DDB_G0267304 [Dictyostelium discoideum AX4]
Length = 833
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%)
Query: 340 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF 399
+ +P +++ Y+ +D+ +AY ++ + ++R F++KG+ Y+ + FGL++AP+ F
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLYVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAPRIF 64
Query: 400 AQLSNWVAVLLRERGVRCLVYLDDFLLA 427
L V +LR+ V + YLDD L+
Sbjct: 65 TMLLRPVLRMLRDINVSVIAYLDDLLIV 92
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 634 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL----------IPMDMSSFRPSL 683
+ +P +++ Y+ +D+ +AY ++ + ++R F+ +P +S+ P +
Sbjct: 5 KNLPSMVKQGYYMVKLDIKKAYLYVLVDPQYRDLFRFVWKGSHYRWKTMPFGLST-APRI 63
Query: 684 SSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLK 743
+ + P + R LR+ V + YLDD L+ + + +T+ LL LG+++NL+
Sbjct: 64 FTMLLRPVL---RMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLVKLGFKLNLE 120
Query: 744 KSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
KS + + + +LG+ + +++ +P +K
Sbjct: 121 KSVLELTQSITFLGLQIGSISMKLLVPKEK 150
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 65 MSTDASDVGWGAMV--GNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 119
++TDAS+ G GA + GN ++ W+ Q + N +E+ + A + + N
Sbjct: 247 LTTDASESGAGATLKKGNKVIKTWSFQWSTTQSNMSSNRREMLALLMAYQALCQKLNNCK 306
Query: 120 VVLQSDNKTVIAYIRKQGG-LRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCN 172
+ +Q+DN T ++YI +QGG ++ ++L E +L K ++++ IPG N
Sbjct: 307 LKIQTDNTTTLSYINRQGGQIQDLSVLFE--QLWKQCLKKKVNLIGEHIPGFFN 358
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 811 MSTDASDVGWGAMV--GNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 865
++TDAS+ G GA + GN ++ W+ Q + N +E+ + A + + N
Sbjct: 247 LTTDASESGAGATLKKGNKVIKTWSFQWSTTQSNMSSNRREMLALLMAYQALCQKLNNCK 306
Query: 866 VVLQSDNKTVIAYIRKQGG-LRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCN 918
+ +Q+DN T ++YI +QGG ++ ++L E +L K ++++ IPG N
Sbjct: 307 LKIQTDNTTTLSYINRQGGQIQDLSVLFE--QLWKQCLKKKVNLIGEHIPGFFN 358
>gi|308508519|ref|XP_003116443.1| hypothetical protein CRE_09308 [Caenorhabditis remanei]
gi|308251387|gb|EFO95339.1| hypothetical protein CRE_09308 [Caenorhabditis remanei]
Length = 2044
Score = 59.7 bits (143), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 146/389 (37%), Gaps = 83/389 (21%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LN+ + L + + L + + T+DL Y IP+ +
Sbjct: 891 DGSIRMCVDYRKLNAVIKLNAHPLPHIESTLQALGRKKWFTTLDLMAGYWQIPMEEESKE 950
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI-------KLGRRLRERGVRCLVYLDDFLLASQDP 719
F + + F P I LG + G VY+DD L+AS+
Sbjct: 951 KTAFTVLNEQYQFEVMPFGLATSPAIFQEAMEQVLGEWI---GKSVFVYIDDILIASESM 1007
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIP------SHRVDYLGISWDTDLLQVRLPVDK 773
+ + L+ + G ++ +K +I H +D LG+ D ++ V+
Sbjct: 1008 EEHAADLAKVLRRIRDCGLKLKAQKCKIAQKSVEYLGHVIDELGVRTDGKKVE---KVEN 1064
Query: 774 IPPLRDRLQTQALIELKWFYHNL--------TGFTPLHPP-------------------- 805
P +DR++ + + L +Y N TPL P
Sbjct: 1065 FPIPKDRVELHSFLGLCTYYRNFVMNFSSIAAPLTPLTSPKVAWRWTSEQQEAFEELKRR 1124
Query: 806 -------------VPRTF-----MSTDASDVGWGAMVGNVSVQG----------VWTQAQ 837
R+F + TDAS G GA++ V + G T A+
Sbjct: 1125 MTSAPVLAQPDIEAARSFERPFCIFTDASGYGIGAVLAQVGLDGKVHPIAFASKALTPAE 1184
Query: 838 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 897
+++H++ KE V A + + +D++ + + + G + LL +
Sbjct: 1185 KNYHVSDKEALAVLFATRRFKHFIFGCPTTVFTDHQPLTSLFK--GKKLADRLL----RW 1238
Query: 898 LLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ M ++IV ++ GK N +ADALSR
Sbjct: 1239 SMEMQDFALNIV--YLKGKANPVADALSR 1265
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ---- 401
L + + T+DL Y IP+ + F YQ + FGLA++P F +
Sbjct: 924 LGRKKWFTTLDLMAGYWQIPMEEESKEKTAFTVLNEQYQFEVMPFGLATSPAIFQEAMEQ 983
Query: 402 -LSNWVAVLLRERGVRCLVYLDDFLLASQ 429
L W+ G VY+DD L+AS+
Sbjct: 984 VLGEWI-------GKSVFVYIDDILIASE 1005
>gi|357630418|gb|EHJ78555.1| hypothetical protein KGM_22402 [Danaus plexippus]
Length = 233
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 90 AQRSWHI-NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAET 148
AQR+ HI N+ + + A+ +D + V++YI K+GG RS LL T
Sbjct: 153 AQRNQHIRNVDKTLKIMASEQKR-----------NTDKRIVVSYINKEGGTRSLKLLELT 201
Query: 149 KKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+ LL ++ K+NIH++ +IPG+ N DALSR
Sbjct: 202 RWLLSVLDKVNIHLIAQYIPGRYNVEVDALSR 233
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 836 AQRSWHI-NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAET 894
AQR+ HI N+ + + A+ +D + V++YI K+GG RS LL T
Sbjct: 153 AQRNQHIRNVDKTLKIMASEQKR-----------NTDKRIVVSYINKEGGTRSLKLLELT 201
Query: 895 KKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ LL ++ K+NIH++ +IPG+ N DALSR
Sbjct: 202 RWLLSVLDKVNIHLIAQYIPGRYNVEVDALSR 233
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 473 SDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 529
+D + V++YI K+ G RS LL T+ LL ++ K+NIH++ +IPG+ N DALSR
Sbjct: 177 TDKRIVVSYINKEGGTRSLKLLELTRWLLSVLDKVNIHLIAQYIPGRYNVEVDALSR 233
>gi|308480981|ref|XP_003102696.1| hypothetical protein CRE_30022 [Caenorhabditis remanei]
gi|308260782|gb|EFP04735.1| hypothetical protein CRE_30022 [Caenorhabditis remanei]
Length = 1083
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ +L LN + +FKL N + FL+ ++ AT D Y HI I R R L F
Sbjct: 294 MILDLSELNKSLVPPRFKLENMKTAWPFLENANFAATFDFKSGYHHIKIHRDSRDLLSFS 353
Query: 378 YK----GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+ L FGLA+AP F ++ + R GV+ +YLDD L+ +
Sbjct: 354 LSNPPAAPYFSFRGLPFGLATAPWLFTKIFKVLVRKWRAEGVKIFLYLDDGLIVGE 409
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 32/179 (17%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
R + +L LN + +FKL N + FL+ ++ AT D Y HI I R R L F
Sbjct: 293 RMILDLSELNKSLVPPRFKLENMKTAWPFLENANFAATFDFKSGYHHIKIHRDSRDLLSF 352
Query: 671 LIPMDMSSFRPSLSSPGVCPTIK---------------------LGRRLRERGVRCLVYL 709
SLS+P P L R+ R GV+ +YL
Sbjct: 353 -----------SLSNPPAAPYFSFRGLPFGLATAPWLFTKIFKVLVRKWRAEGVKIFLYL 401
Query: 710 DDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVR 768
DD L+ + + + L G V +KS +P + +LG D +VR
Sbjct: 402 DDGLIVGETEYEVARASRRVRGDLAEAGVCVAEEKSFWVPDAKFTWLGYECDLVAREVR 460
>gi|242022144|ref|XP_002431501.1| enzymatic polyprotein, putative [Pediculus humanus corporis]
gi|212516795|gb|EEB18763.1| enzymatic polyprotein, putative [Pediculus humanus corporis]
Length = 909
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + + LN K+ + N ++I L ++ Y T+DL+ + IP+ + F
Sbjct: 172 VVIDYRKLNEVTVDDKYPIPNIEEILDQLGRSKYFTTLDLASGFHQIPLNDDDSKKTAFT 231
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS---QDSVVL 434
Y+ T + FGL +AP F +L N V L +G++C VYLDD ++ + Q+ V
Sbjct: 232 TPFGHYEYTRMPFGLKNAPATFQRLMNTVLSGL--QGLQCFVYLDDIVIHAASIQEHEVK 289
Query: 435 KNQIFQTLPVN 445
+IF L +N
Sbjct: 290 LRKIFDRLRLN 300
Score = 40.0 bits (92), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 22/229 (9%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G+ R V + + LN K+ + N ++I L ++ Y T+DL+ + IP+
Sbjct: 166 GEKKWRVVIDYRKLNEVTVDDKYPIPNIEEILDQLGRSKYFTTLDLASGFHQIPLNDDDS 225
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE------RGVRCLVYLDDFLLAS--- 716
+ F P + + G+ +RL +G++C VYLDD ++ +
Sbjct: 226 KKTAFTTPFGHYEY--TRMPFGLKNAPATFQRLMNTVLSGLQGLQCFVYLDDIVIHAASI 283
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVN----LKKSQIIPSHRVDYLGISWDTDLLQVRLPVD 772
Q+ V +I L+ L L Q + L++ + H + +G+ + D +Q ++
Sbjct: 284 QEHEVKLRKIFDRLR-LNNLKLQPDKCEFLRREVVYLGHTISDVGVRPNPDKVQ---GIN 339
Query: 773 KIPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGW 820
P + ++ + L +Y + GF + P+ T + D W
Sbjct: 340 SFPIPKSTKDIRSFLGLVGYYRRFIKGFAKIAKPL--TILLKKNQDFKW 386
>gi|308493269|ref|XP_003108824.1| hypothetical protein CRE_11685 [Caenorhabditis remanei]
gi|308247381|gb|EFO91333.1| hypothetical protein CRE_11685 [Caenorhabditis remanei]
Length = 1143
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC-- 375
++ +L LN + +FKL N + FL+ ++ AT D Y HI I R R L
Sbjct: 310 MILDLSELNKSLVPPRFKLENMKTAWPFLENANFAATFDFKSGYHHIKIHRDSRDLLSFS 369
Query: 376 ---------FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F +KG L FGLA+AP F ++ + R G++ +YLDD L+
Sbjct: 370 LSNPPAAPYFFFKG-------LPFGLATAPWLFTKIFKVLVRKWRAEGIKMFLYLDDGLI 422
Query: 427 ASQ 429
+
Sbjct: 423 VGE 425
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 32/179 (17%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
R + +L LN + +FKL N + FL+ ++ AT D Y HI I R R L F
Sbjct: 309 RMILDLSELNKSLVPPRFKLENMKTAWPFLENANFAATFDFKSGYHHIKIHRDSRDLLSF 368
Query: 671 LIPMDMSSFRPSLSSPGVCPTI---------------------KLGRRLRERGVRCLVYL 709
SLS+P P L R+ R G++ +YL
Sbjct: 369 -----------SLSNPPAAPYFFFKGLPFGLATAPWLFTKIFKVLVRKWRAEGIKMFLYL 417
Query: 710 DDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVR 768
DD L+ + + + L G V +KS +P + +LG D +VR
Sbjct: 418 DDGLIVGETEYEVARASRRVRGDLAEAGVCVAEEKSFWVPDAKFTWLGYECDLVAREVR 476
>gi|308478699|ref|XP_003101560.1| hypothetical protein CRE_10350 [Caenorhabditis remanei]
gi|308263014|gb|EFP06967.1| hypothetical protein CRE_10350 [Caenorhabditis remanei]
Length = 1069
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC-- 375
++ +L LN + +FKL N + FL+ ++ AT D Y HI I R R L
Sbjct: 514 MILDLSELNKSLVPPRFKLENMKTAWPFLENANFAATFDFKSGYHHIKIHRDSRDLLSFS 573
Query: 376 ---------FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F +KG L FGLA+AP F ++ + R G++ +YLDD L+
Sbjct: 574 LSNPPAAPYFFFKG-------LPFGLATAPWLFTKIFKVLVRKWRAEGIKMFLYLDDGLI 626
Query: 427 ASQ 429
+
Sbjct: 627 VGE 629
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 32/179 (17%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
R + +L LN + +FKL N + FL+ ++ AT D Y HI I R R L F
Sbjct: 513 RMILDLSELNKSLVPPRFKLENMKTAWPFLENANFAATFDFKSGYHHIKIHRDSRDLLSF 572
Query: 671 LIPMDMSSFRPSLSSPGVCPTI---------------------KLGRRLRERGVRCLVYL 709
SLS+P P L R+ R G++ +YL
Sbjct: 573 -----------SLSNPPAAPYFFFKGLPFGLATAPWLFTKIFKVLVRKWRAEGIKMFLYL 621
Query: 710 DDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVR 768
DD L+ + + + L G V +KS +P + +LG D +VR
Sbjct: 622 DDGLIVGETEYEVARASRRVRGDLAEAGVCVAEEKSFWVPDAKFTWLGYECDLVAREVR 680
>gi|242022148|ref|XP_002431503.1| enzymatic polyprotein; Endonuclease; Reverse transcriptase,
putative [Pediculus humanus corporis]
gi|212516797|gb|EEB18765.1| enzymatic polyprotein; Endonuclease; Reverse transcriptase,
putative [Pediculus humanus corporis]
Length = 805
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + + LN K+ + N ++I L ++ Y T+DL+ + IP+ + F
Sbjct: 68 VVIDYRKLNEVTVDDKYPIPNIEEILDQLGRSKYFTTLDLASGFHQIPLNDDDSKKTAFT 127
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS---QDSVVL 434
Y+ T + FGL +AP F +L N VL +G++C VYLDD ++ + Q+ +
Sbjct: 128 TPFGHYEYTRMPFGLKNAPATFQRLMN--TVLSGLQGLQCFVYLDDIVIHAASIQEHEIK 185
Query: 435 KNQIFQTLPVN 445
+IF L +N
Sbjct: 186 LRKIFDRLRLN 196
>gi|440790519|gb|ELR11801.1| hypothetical protein ACA1_362880 [Acanthamoeba castellanii str.
Neff]
Length = 439
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 118/311 (37%), Gaps = 62/311 (19%)
Query: 699 RERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTY--LGWQVNLKKSQIIPSHRVDYL 756
R +G+ + YLDDF++ + D L+ QI T+ LT LGW K + + + L
Sbjct: 6 RRQGIIVMSYLDDFVVMAPDCEALQ-QIHDTVITLTLDRLGWLREPTKGEWELTQCAEVL 64
Query: 757 GISWDTDLLQVRLPVDKIPPL-----------RDRLQTQALI------------------ 787
G+ D + +R+P K+ L R R Q L+
Sbjct: 65 GLVVDLGMGLLRVPEPKVEALEGLCLRNVCDHRTRRQLAELVGSVTAVSRAALVLHLYLH 124
Query: 788 -------------------------ELKWFYHN--LTGFTPLHPPVPRTFMSTDASDVGW 820
++ W N L +PL P TDA D GW
Sbjct: 125 SVYQLIGHNWRGWNRRVLMDVATCGDIAWIGSNIRLVAGSPLWRPSHVMVFQTDACDTGW 184
Query: 821 GAMVGNVSVQ--GVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAY 878
GA + V +Q G + + +W I+ KE+ V+ A+ VA V +SDN V+ Y
Sbjct: 185 GACIPKVGLQARGAFMVDELAWPIHHKEMKAVKLAVEMLGHYVAGWWVEFESDNIMVVVY 244
Query: 879 IRKQGGLRSHALLAETKKLLLIMSK-LNIHIVPYFIPGKCNSLADALSRQALIPDWHLLP 937
+ GG + L ++K ++ V + N AD LS + +W L
Sbjct: 245 LCDGGGPDLWMTDVMWRVWLRAVAKGCGVYNVQWIHGSMDNREADWLSHYSNTNNWELSW 304
Query: 938 SLTESVFQRWG 948
+ + Q++G
Sbjct: 305 DIVAELEQQFG 315
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 42 ELKWFYHN--LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQ--GVWTQAQRSWHIN 97
++ W N L +PL P TDA D GWGA + V +Q G + + +W I+
Sbjct: 150 DIAWIGSNIRLVAGSPLWRPSHVMVFQTDACDTGWGACIPKVGLQARGAFMVDELAWPIH 209
Query: 98 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSK 157
KE+ V+ A+ VA V +SDN V+ Y+ GG + L ++K
Sbjct: 210 HKEMKAVKLAVEMLGHYVAGWWVEFESDNIMVVVYLCDGGGPDLWMTDVMWRVWLRAVAK 269
Query: 158 -LNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWG 202
++ V + N AD LS + +W L + + Q++G
Sbjct: 270 GCGVYNVQWIHGSMDNREADWLSHYSNTNNWELSWDIVAELEQQFG 315
>gi|14010621|gb|AAK52055.1|AF364549_1 RNA-directed DNA polymerase [Drosophila melanogaster]
Length = 1013
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 302 NDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAY 361
+ +G D + N + ++ + + LN ++ + N I L K Y T+DL Y
Sbjct: 202 DKKGTD--DAGNKKMRLVLDFRKLNERTVPDRYPMPNISMILGNLGKAKYFTTLDLKSGY 259
Query: 362 CHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVY 420
I +A R R F G Y+ L FGL +A F + + +LRE+ G C VY
Sbjct: 260 HQITLAERDREKTAFAVNGGKYEFRRLPFGLRNAASIFQRT---IDDILREQIGKFCYVY 316
Query: 421 LDDFLLASQDS 431
+DD ++ S+D
Sbjct: 317 VDDVIIFSEDE 327
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 16/264 (6%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G+ MR V + + LN ++ + N I L K Y T+DL Y I +A R R
Sbjct: 210 GNKKMRLVLDFRKLNERTVPDRYPMPNISMILGNLGKAKYFTTLDLKSGYHQITLAERDR 269
Query: 666 RFLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRER-GVRCLVYLDDFLLASQDPIV 721
F + FR L + + LRE+ G C VY+DD ++ S+D
Sbjct: 270 EKTAFAVNGGKYEFRRLPFGLRNAASIFQRTIDDILREQIGKFCYVYVDDVIIFSEDEND 329
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGI-----SWDTDLLQVRLPVDKIPP 776
+ L+ L +++ +KS+ V +LG TD +V+ + + P
Sbjct: 330 HVKHVDWVLKSLYDANMRISAEKSRFF-KKSVSFLGFIVTNNGAATDPEKVK-AIKEFPE 387
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ 835
++ + ++ + L +Y + F + P+ + G + + S+Q +++
Sbjct: 388 PKNVFEVRSFLGLASYYRCFIKDFASIARPISDILKGEN----GSVSRHRSRSIQVEFSE 443
Query: 836 AQRSWHINLKELFTVRAAISSNPS 859
AQ+ L+ + I P
Sbjct: 444 AQQRAFEKLRNILASEDVILRYPD 467
>gi|66828695|ref|XP_647701.1| hypothetical protein DDB_G0267342 [Dictyostelium discoideum AX4]
gi|60475845|gb|EAL73777.1| hypothetical protein DDB_G0267342 [Dictyostelium discoideum AX4]
Length = 925
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 340 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF 399
+ +P +++ Y+ +D+ +AY H+ + ++R F++KG+ Y+ + FGL++A + F
Sbjct: 112 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAHRIF 171
Query: 400 AQLSNWVAVLLRERGVRCLVYLDDFLL 426
L V +LR+ V + YLDD L+
Sbjct: 172 TMLLRPVLRMLRDINVSVIAYLDDLLI 198
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 30/141 (21%)
Query: 634 QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL----------IPMDMSS----- 678
+ +P +++ Y+ +D+ +AY H+ + ++R F+ +P +S+
Sbjct: 112 KNLPSMVKQGYYMVKLDIKKAYLHVLVDPQYRDLFRFVWKGSHYRWKTMPFGLSTAHRIF 171
Query: 679 ---FRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTY 735
RP L R LR+ V + YLDD L+ + + +T+ LL
Sbjct: 172 TMLLRPVL------------RMLRDINVSVIAYLDDLLIVGSTKEECLSNLKKTMDLLIK 219
Query: 736 LGWQVNLKKSQIIPSHRVDYL 756
LG+++NL+KS + P+ + L
Sbjct: 220 LGFKLNLEKSVLEPTQSITLL 240
>gi|301627285|ref|XP_002942808.1| PREDICTED: hypothetical protein LOC100488967, partial [Xenopus
(Silurana) tropicalis]
Length = 731
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 44/258 (17%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLT-YLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ 766
YLDDFL +LQT+Q +T G + +K++ PS + +LGI DT +
Sbjct: 208 YLDDFLCIGPANSPACAILLQTVQRVTSEFGVPLAPEKTEG-PSTYMKFLGIEIDTVRQE 266
Query: 767 VRLPVDKIPPLRDRLQT------------QALI------------------ELKWFYHNL 796
RLP+DK+ L++ +Q Q+L+ L L
Sbjct: 267 CRLPIDKVSALKENIQRAISSKKLTLKQLQSLLGKLTFACRIITMGRVFSRRLAMATSGL 326
Query: 797 TGFTPLHPPVPRTFMSTDAS-DVGWGAMVGNVSVQGVWTQAQRSW-------HINLKELF 848
TG + TDA+ G+GA W + SW ++ L ELF
Sbjct: 327 TGIVWTTDTNKDLQLFTDAAGSCGFGAYFSGSWCAEKWPE---SWVAGGLTRNLTLLELF 383
Query: 849 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
+ AI L +N V +DN +V+ I Q S +LA + L+L + NI
Sbjct: 384 PILVAIELWGHLFSNRNVTFNTDNMSVVLAINNQTS-SSGPVLALLRHLVLRCLQSNICF 442
Query: 909 VPYFIPGKCNSLADALSR 926
+PG N +AD+LSR
Sbjct: 443 RAQHLPGVVNDIADSLSR 460
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 87 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 146
W + ++ L ELF + AI L +N V +DN +V+ I Q S +LA
Sbjct: 368 WVAGGLTRNLTLLELFPILVAIELWGHLFSNRNVTFNTDNMSVVLAINNQTS-SSGPVLA 426
Query: 147 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+ L+L + NI +PG N +AD+LSR
Sbjct: 427 LLRHLVLRCLQSNICFRAQHLPGVVNDIADSLSR 460
>gi|313236395|emb|CBY11713.1| unnamed protein product [Oikopleura dioica]
Length = 1568
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 21/163 (12%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL------SSPGVCPTI 692
L+K D + D + Y +P+A+ R+ CF +F ++ ++PG+ ++
Sbjct: 224 LLKKGDLMVKYDDKKGYHQMPLAKDSRKMACF--EWGGKTFVNNILCFGLPAAPGIYQSM 281
Query: 693 -KLG-RRLRERGVRCLVYLDDFLL-------ASQDPIVLKNQILQ----TLQLLTYLGWQ 739
++G LR+ G++ +YLDD L+ A + ++ ++ + T L LG
Sbjct: 282 NQVGINFLRKNGIKATLYLDDRLVVITPKSEAQRKRLIEGKEVCREAWITAATLVALGGF 341
Query: 740 VNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQ 782
VN++KS+ IP R+++LG D+ V +P + L+ +LQ
Sbjct: 342 VNIEKSEFIPKQRMEFLGFILDSQTETVEIPQGRWNALKAKLQ 384
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L+K D + D + Y +P+A+ R+ CF + G + L FGL +AP + ++
Sbjct: 224 LLKKGDLMVKYDDKKGYHQMPLAKDSRKMACFEWGGKTFVNNILCFGLPAAPGIYQSMNQ 283
Query: 405 WVAVLLRERGVRCLVYLDDFLL 426
LR+ G++ +YLDD L+
Sbjct: 284 VGINFLRKNGIKATLYLDDRLV 305
>gi|340383595|ref|XP_003390302.1| PREDICTED: hypothetical protein LOC100640973 [Amphimedon
queenslandica]
Length = 878
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 139/371 (37%), Gaps = 84/371 (22%)
Query: 642 KNDYLATIDLSQAYCHIPIARRHRRFLCF----------LIPMDMSSFRPSLSSPGVCPT 691
+ ++A +DL AY H+P+ + L +P +SS +P +
Sbjct: 472 RGAFMAKLDLKAAYRHVPVHPDDQSLLAIRWGGATYLDTALPFGLSS------APKIFTA 525
Query: 692 IKLGRR---LRERGVRCLVYLDDFLLAS-QDPIVLKNQILQTLQLLTYLGWQVNLKKSQI 747
+ G + E L YLDDF Q P + + + L +LG+ V +K +
Sbjct: 526 MADGLSWCMMCEGVSHFLHYLDDFFFCPPQHPGRCQQSLRVAVNLCEHLGFPVAPEKV-V 584
Query: 748 IPSHRVDYLGISWDTDLLQVRLP------------------------------------- 770
P+ + +LGI D+ +++RLP
Sbjct: 585 GPATTLVFLGIELDSIKMEMRLPQGKLERLQGSLGWWLTRESVTKKQLQSIVGQLSDAAV 644
Query: 771 --------------VDKIPPLRD---RLQTQALIELKW---FYHNLTGFTPLHP--PVPR 808
KIP +D RL + +L+W F N G L P P+
Sbjct: 645 VVRPGRTFIRSLIEASKIPRKQDHLVRLNQECRADLQWWNSFIQNWNGVA-LFPGRPLLE 703
Query: 809 TFMSTDASDVGWGAMV--GNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTV 866
T S + G GA++ G+ Q W R +I KELF V A + S V
Sbjct: 704 TVTSDASGSWGCGALLEDGSAWFQFQWPAPWRDANIATKELFPVVLAAALWGSRWRGRRV 763
Query: 867 VLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
++DN+ V++ + + L+ + L I + +I IPG+ N ADALSR
Sbjct: 764 RYRTDNQAVVSALANYSA-KDPPLVHLLRSLFFIEAYFDIEHSVVHIPGEDNGAADALSR 822
Query: 927 QALIPDWHLLP 937
+ + LLP
Sbjct: 823 DKRVTFFSLLP 833
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
+ ++A +DL AY H+P+ + L + G Y T L FGL+SAP+ F +++ ++
Sbjct: 472 RGAFMAKLDLKAAYRHVPVHPDDQSLLAIRWGGATYLDTALPFGLSSAPKIFTAMADGLS 531
Query: 408 VLLRERGV-RCLVYLDDFLL 426
+ GV L YLDDF
Sbjct: 532 WCMMCEGVSHFLHYLDDFFF 551
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 42 ELKW---FYHNLTGFTPLHP--PVPRTFMSTDASDVGWGAMV--GNVSVQGVWTQAQRSW 94
+L+W F N G L P P+ T S + G GA++ G+ Q W R
Sbjct: 679 DLQWWNSFIQNWNGVA-LFPGRPLLETVTSDASGSWGCGALLEDGSAWFQFQWPAPWRDA 737
Query: 95 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 154
+I KELF V A + S V ++DN+ V++ + + L+ + L I
Sbjct: 738 NIATKELFPVVLAAALWGSRWRGRRVRYRTDNQAVVSALANYSA-KDPPLVHLLRSLFFI 796
Query: 155 MSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLP 191
+ +I IPG+ N ADALSR + + LLP
Sbjct: 797 EAYFDIEHSVVHIPGEDNGAADALSRDKRVTFFSLLP 833
>gi|340377297|ref|XP_003387166.1| PREDICTED: hypothetical protein LOC100634483 [Amphimedon
queenslandica]
Length = 1302
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 329 VTTKKFKLINHQKIPL---FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQR 385
V K F L ++ + +++ YL T DL Y H+ I H+ +L F ++ Y
Sbjct: 604 VAQKPFYLFKYEDFKTALDYFEEDAYLFTFDLKSGYHHVDIHSEHQTYLGFQWEHKFYVF 663
Query: 386 TCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
T L FGL++A F +L V ++ G+R ++YLDD +++ + S
Sbjct: 664 TVLPFGLSTACSIFTKLLWHVVKYIQACGIRLVLYLDDGIVSVKAS 709
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 623 VTTKKFKLINHQKIPL---FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSF 679
V K F L ++ + +++ YL T DL Y H+ I H+ +L F F
Sbjct: 604 VAQKPFYLFKYEDFKTALDYFEEDAYLFTFDLKSGYHHVDIHSEHQTYLGFQWEHKFYVF 663
Query: 680 R--PSLSSPGVCPTIKL----GRRLRERGVRCLVYLDDFLL---ASQDPIVLKNQILQTL 730
P S KL + ++ G+R ++YLDD ++ AS+ + +++++
Sbjct: 664 TVLPFGLSTACSIFTKLLWHVVKYIQACGIRLVLYLDDGIVSVKASESQAIAASKLVE-- 721
Query: 731 QLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVD 772
L G + +KS +P +LG D D ++ +D
Sbjct: 722 DTLVKAGLVIKKEKSNFVPPKHASWLGFDIDLDQRIIKTIMD 763
>gi|384485786|gb|EIE77966.1| hypothetical protein RO3G_02670 [Rhizopus delemar RA 99-880]
Length = 228
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 299 LSGNDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLS 358
LS D+ H+ T + + + LN ++ + F++ + +++NDY+ IDL
Sbjct: 136 LSAEDQLHE-----QTKRRPILDRQKLNRFLQVEHFQMEGVPTLREIIEENDYICKIDLK 190
Query: 359 QAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAP 396
AY IPI + +L F +GTVY+ L+FGL+ AP
Sbjct: 191 DAYVVIPIHPDSQDYLSFENQGTVYRYKSLAFGLSVAP 228
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 580 FKLAWVFPPPPLLQVLHHLNDAQGLYGDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLF 639
+K+ + P P HL+ L+ RP+ + + LN ++ + F++ +
Sbjct: 118 YKIQFAKQPVPWKLPKKHLSAEDQLHEQTKRRPILDRQKLNRFLQVEHFQMEGVPTLREI 177
Query: 640 LQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
+++NDY+ IDL AY IPI + +L F
Sbjct: 178 IEENDYICKIDLKDAYVVIPIHPDSQDYLSF 208
>gi|158830699|gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
Length = 673
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 155/392 (39%), Gaps = 70/392 (17%)
Query: 598 LNDAQGLYGDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCH 657
L + + G G R V N K LN L N Q++ L+ ++ D +
Sbjct: 283 LVEKEAEKGRGKKRMVVNYKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQ 342
Query: 658 IPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFL 713
+ + + ++ F P +R P+I R ++ RG+ CLVY+DD +
Sbjct: 343 VFLDQESQKLTAFTCPQGHFQWRVVPFGLKQAPSI-FQRHMQNALRGLEEFCLVYVDDII 401
Query: 714 LASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT----------- 762
+ S +L+ L+ + LG ++ KK+ + ++++LG+ D
Sbjct: 402 VFSDKEEEHYTHVLKVLKRIESLGIILSEKKANLF-KEKINFLGLEIDRGTHTPQNHILE 460
Query: 763 ------DLLQVRLPVDK-----------IPPLRDR---LQTQALIELKWFYHN------- 795
D L+ + + + IP L ++ LQ + + W ++
Sbjct: 461 HLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWNQSDTDYVK 520
Query: 796 -----LTGFTPLHPPVPRT--FMSTDASDVGWGAMV------GNVSV----QGVWTQAQR 838
L F L+ P + TDASD WG ++ GN + G + A+
Sbjct: 521 KIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAEL 580
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
++H N KEL V+ I+ + T +++DN ++ + + ++K+
Sbjct: 581 NYHSNEKELLAVKQVITKFSIYLTPVTFTVRTDNVNLLK------RFMNTKITGDSKQGR 634
Query: 899 LIMSKLNIHIVPY---FIPGKCNSLADALSRQ 927
LI ++ + + + G+ N LAD L+R+
Sbjct: 635 LIRWQMWLSHYTFNVNHLKGEKNVLADYLTRE 666
>gi|269146448|gb|ACZ28170.1| reverse transcriptase-like polymerase [Simulium nigrimanum]
Length = 339
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
N K LNS V + K+ + + + I L + +IDL Q + IP+ R+ F
Sbjct: 158 NFKKLNSQVISDKYPVPSIEDILAQLGGKSFFTSIDLVQGFYQIPLREEDRKKTAFSGPT 217
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
Y+ L GL ++P F ++ N +L + G+RC VY+DD + S
Sbjct: 218 GKYEFLRLPMGLKNSPAVFXRMLN--DILRDDIGIRCFVYVDDIICFSD 264
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
R N K LNS V + K+ + + + I L + +IDL Q + IP+ R+ F
Sbjct: 154 RLTVNFKKLNSQVISDKYPVPSIEDILAQLGGKSFFTSIDLVQGFYQIPLREEDRKKTAF 213
Query: 671 LIPMDMSSF-RPSL---SSPGVCPTIKLGRRLRER-GVRCLVYLDDFLLASQ 717
P F R + +SP V + L LR+ G+RC VY+DD + S
Sbjct: 214 SGPTGKYEFLRLPMGLKNSPAVFXRM-LNDILRDDIGIRCFVYVDDIICFSD 264
>gi|158726337|gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
Length = 812
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 167/442 (37%), Gaps = 71/442 (16%)
Query: 544 ESVFPRWGSRVVPLYVTRNPQDSKAAFIDAFSRKWDFKLAWVFPPPPLLQVLHHLNDAQG 603
E + P+ RV P+ + PQD + F D KL P + N+A+
Sbjct: 379 ELIDPKTVVRVKPMKYS--PQD-REEFGKQIKELLDLKLIIPSKSPHMSPAFLVENEAEK 435
Query: 604 LYGDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARR 663
G R V N K++N+ L Q++ L+ +T D + + +
Sbjct: 436 --RRGKKRRVVNYKAINAATKGDSHNLPCMQELLTLLRGKTIFSTFDCKSGFWQVLLNEE 493
Query: 664 HRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLASQDP 719
+ F P +R P+I R ++ RG+ C VY+DD ++ S
Sbjct: 494 SQLLTAFTCPDGHYQWRVVPFGLKQAPSI-FQRHMQNALRGLENYCTVYVDDIIVFSDSE 552
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT----------------- 762
+L L+ + G ++ KK+ + + ++++LG+ D
Sbjct: 553 EKHYFHVLSALKTIEKYGIILSKKKANLFKT-KINFLGLEIDQGTHCPQKHILENLHKFP 611
Query: 763 DLLQVRLP--------------VDKIPPLRDRLQTQALIELKWFYH------------NL 796
D L+ + + K+ LR LQ + + W + NL
Sbjct: 612 DTLEDKKHLQRFLGVLTYAESYIPKLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKKNL 671
Query: 797 TGFTPLHPPVPRTFM--STDASDVGWGAMVGNVSVQ---------GVWTQAQRSWHINLK 845
T F L+ P + F+ TDAS+ WG ++ + G + A+R++H N K
Sbjct: 672 TSFPKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAERNYHSNEK 731
Query: 846 ELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIR-KQGGLRSHALLAETKKLLLIMSKL 904
EL V+ IS + ++++DN+ +++ K G L + + S+
Sbjct: 732 ELLAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLV---RWQMWFSRY 788
Query: 905 NIHIVPYFIPGKCNSLADALSR 926
+ I + G N LAD L R
Sbjct: 789 SFDIE--HLEGSKNVLADCLPR 808
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 43 LKWFYHNLTGFTPLHPPVPRTFM--STDASDVGWGAMVGNVSVQ---------GVWTQAQ 91
+K NLT F L+ P + F+ TDAS+ WG ++ + G + A+
Sbjct: 664 IKKIKKNLTSFPKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAE 723
Query: 92 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIR-KQGGLRSHALLAETKK 150
R++H N KEL V+ IS + ++++DN+ +++ K G L +
Sbjct: 724 RNYHSNEKELLAVKNTISKFSIYLTPVKFLVRTDNRNFTYFLKTKISGDNKQGRLV---R 780
Query: 151 LLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+ S+ + I + G N LAD L R
Sbjct: 781 WQMWFSRYSFDIE--HLEGSKNVLADCLPR 808
>gi|313214780|emb|CBY41042.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL------SSPGVCPTI 692
L+K D + D + + +P+A ++ CF F ++ ++PG+ ++
Sbjct: 210 LLKKGDLMIKFDDKRGFHQMPLAEESKKMACF--EWGGKKFVNNILCFGLPAAPGIYQSM 267
Query: 693 KLG--RRLRERGVRCLVYLDDFLL-------ASQDPIVLKNQILQ----TLQLLTYLGWQ 739
L LR+ G++ +YLDD L+ A + ++ ++ + T L LG
Sbjct: 268 NLVGINFLRKNGIKATLYLDDRLVIVTPKSKAHRQRLIEGKEVCKEAWLTAATLVALGGF 327
Query: 740 VNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQAL 786
VN++KS+ IP R+++LG D++ + +P ++ L+ +LQ QAL
Sbjct: 328 VNIEKSEFIPKQRMEFLGFILDSETETIEIPQNRWLALKAKLQ-QAL 373
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L+K D + D + + +P+A ++ CF + G + L FGL +AP + Q N
Sbjct: 210 LLKKGDLMIKFDDKRGFHQMPLAEESKKMACFEWGGKKFVNNILCFGLPAAPGIY-QSMN 268
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR+ G++ +YLDD L+
Sbjct: 269 LVGINFLRKNGIKATLYLDDRLV 291
>gi|266827|sp|Q00962.1|POL_CAMVN RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
gi|331571|gb|AAA46358.1| reverse transcriptase [Cauliflower mosaic virus]
gi|445598|prf||1909346E reverse transcriptase
Length = 680
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 145/390 (37%), Gaps = 68/390 (17%)
Query: 599 NDAQGLYGDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHI 658
N+A+ G G R V N K++N + L N ++ ++ ++ D + +
Sbjct: 292 NEAEN--GRGNKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQV 349
Query: 659 PIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLL 714
+ + R F P + P+I R + E R R C VY+DD ++
Sbjct: 350 LLDQESRPLTAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDIVV 408
Query: 715 AS---QDPIVLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHR 752
S +D ++ ILQ + +LG +++ K I H
Sbjct: 409 FSNNEEDHLLHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHI 468
Query: 753 VDYLGISWDTDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY----------- 793
+ D LQ L + D IP L R LQ + + W +
Sbjct: 469 NKFPDTLEDKKQLQRFLGILTYASDYIPNLAQMRQPLQAKLKENVPWKWTKEDTLYMQKV 528
Query: 794 -HNLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQ 837
NL GF PLH P+P + + TDASD WG M+ + + G + A+
Sbjct: 529 KKNLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYRSGSFKAAE 588
Query: 838 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 897
R++H N KE V I + ++++DN +++ + + L +
Sbjct: 589 RNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRW 646
Query: 898 LLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
+S + + I G N AD LSR+
Sbjct: 647 QAWLSHYSFDV--EHIKGTDNHFADFLSRE 674
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+R+
Sbjct: 531 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYRSGSFKAAERN 590
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 591 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 648
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 649 WLSHYSFDV--EHIKGTDNHFADFLSRE 674
>gi|440792310|gb|ELR13538.1| RNAdirected DNA polymerase subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 774
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 134/361 (37%), Gaps = 59/361 (16%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G R V +++ +N + ++ + + + ++ T DL+Q Y H+ +
Sbjct: 460 GPKKWRLVIDMRRINLGIAERRVRFEGLSSVARVAGRGWWMITFDLAQGYHHLLVEEESC 519
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTI------KLGRRLRERGVRCLVYLDDFLLASQDP 719
+ L F + +R + P + + R R +G+ YLDDF++ + D
Sbjct: 520 QLLGFRVGDRWFRYRVLPFGLRISPWVFTKVVRAMVRDWRRQGIVVTSYLDDFVVMAPDC 579
Query: 720 IVLKNQILQTL--QLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPL 777
L+ +I T+ L L W K + P+ + L
Sbjct: 580 EALR-RIRDTVITPTLDQLRWLREPTKGEWEPTQCAEVL--------------------- 617
Query: 778 RDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ 837
AL+ ++W H L PL TF+S A +G + +
Sbjct: 618 -------ALVVVRW-SHTLRRHRPLSAS---TFVSLQA--------------RGAFAADK 652
Query: 838 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 897
+W I+ KE+ V A+ + VA V +SDN V+AY+R GG +
Sbjct: 653 LAWPIHHKEMKPVELAVDTLGHYVAGRWVEFESDNVMVVAYLRDGGGPDPWMTDVVRRVW 712
Query: 898 LLIMSK-LNIHIVPYFIPGKCNSLADALSRQALIPDWHL---LPSLTESVFQRWGTISSC 953
L ++ ++ + N AD LSR + DW L + E F W + +S
Sbjct: 713 LRAAAEGCGVYNARWIRGSTDNREADWLSRYSDTDDWELSWDTVAELEQQFGGWDSTASP 772
Query: 954 T 954
T
Sbjct: 773 T 773
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 54/119 (45%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ +++ +N + ++ + + + ++ T DL+Q Y H+ + + L F
Sbjct: 466 LVIDMRRINLGIAERRVRFEGLSSVARVAGRGWWMITFDLAQGYHHLLVEEESCQLLGFR 525
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKN 436
++ L FGL +P F ++ + R +G+ YLDDF++ + D L+
Sbjct: 526 VGDRWFRYRVLPFGLRISPWVFTKVVRAMVRDWRRQGIVVTSYLDDFVVMAPDCEALRR 584
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 38/222 (17%)
Query: 1 RGVRCLVYLDDFLLASQDPIVLK----NQILQTLQLLTYLAQ---------------ALI 41
+G+ YLDDF++ + D L+ I TL L +L + AL+
Sbjct: 561 QGIVVTSYLDDFVVMAPDCEALRRIRDTVITPTLDQLRWLREPTKGEWEPTQCAEVLALV 620
Query: 42 ELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKEL 101
++W H L PL TF+S A +G + + +W I+ KE+
Sbjct: 621 VVRW-SHTLRRHRPLSAS---TFVSLQA--------------RGAFAADKLAWPIHHKEM 662
Query: 102 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSK-LNI 160
V A+ + VA V +SDN V+AY+R GG + L ++ +
Sbjct: 663 KPVELAVDTLGHYVAGRWVEFESDNVMVVAYLRDGGGPDPWMTDVVRRVWLRAAAEGCGV 722
Query: 161 HIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWG 202
+ + N AD LSR + DW L + Q++G
Sbjct: 723 YNARWIRGSTDNREADWLSRYSDTDDWELSWDTVAELEQQFG 764
>gi|427798379|gb|JAA64641.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 636
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 147/389 (37%), Gaps = 76/389 (19%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LN + L L ++ +++DL Y +P+A R+
Sbjct: 153 DGSIRFCVDYRRLNKITRKDVYPLPRIDDAIDTLHGAEFFSSLDLRSGYWQVPMADADRQ 212
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR------CLVYLDDFLLASQDPI 720
F+ P + F ++ G+C RL + +R CL YLDD ++ S D
Sbjct: 213 KTAFITPDGLYEF--NVMPFGLCNAPATFERLMDNTLRGLKWTMCLCYLDDVVVFSHDFP 270
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQ------IIPSHRVDYLGISWDTDLLQ-------- 766
++ L LT G Q+NLKK + +I H V G+ D L+
Sbjct: 271 THLLRLRHVLTCLTNAGLQLNLKKCRFTARELVILGHIVSKHGVLPDPAKLRAVAEFPKP 330
Query: 767 -------------------VRLPVDKIPPLRDRLQTQALIELKWFYHNLTGFTPLH---- 803
VR + PL L+ + W + FT L
Sbjct: 331 TTMKELRSFVGLCSYFRRFVRNFASIMSPLTQLLRGDVNLS-SWSHACDVAFTTLRRLLT 389
Query: 804 -PPVPRTF-------MSTDASDVGWGAMVGN----------VSVQGVWTQAQRSWHINLK 845
PP+ R F + TDAS VG GA++ T+A+ ++ + K
Sbjct: 390 SPPILRHFDPTAPTEVHTDASGVGLGAVLAQRKPGYSEYVVAYASRTLTKAEANYSVTEK 449
Query: 846 ELFTVRAAISSNPSLVANHTVVLQSDNKTV--IAYIRKQGGLRSHALLAETKKLLLIMSK 903
E + A+ + L +D+ + ++ ++ G + L + +
Sbjct: 450 ECLALVWALGKFRPYLYGRPFYLVTDHHALCWLSTLKDPSG--------RLARWALRIQE 501
Query: 904 LNIHIVPYFIPGKCNSLADALSRQALIPD 932
+I +V + G+ +S ADALSR L PD
Sbjct: 502 YDIRVV--YRCGRKHSDADALSRSPLPPD 528
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L ++ +++DL Y +P+A R+ F+ +Y+ + FGL +AP F +L +
Sbjct: 186 LHGAEFFSSLDLRSGYWQVPMADADRQKTAFITPDGLYEFNVMPFGLCNAPATFERLMDN 245
Query: 406 VAVLLRERGVR---CLVYLDDFLLASQD 430
RG++ CL YLDD ++ S D
Sbjct: 246 TL-----RGLKWTMCLCYLDDVVVFSHD 268
>gi|313235656|emb|CBY11109.1| unnamed protein product [Oikopleura dioica]
Length = 428
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL------SSPGVCPTI 692
L+K D + D + + +P+A ++ CF F ++ ++PG+ +
Sbjct: 22 LLKKGDLMVKYDDKRGFHQMPLAEESKKMACF--EWGGKKFVNNILCFGLPAAPGIYQNM 79
Query: 693 KLG--RRLRERGVRCLVYLDDFLL-------ASQDPIVLKNQILQ----TLQLLTYLGWQ 739
L LR+ G++ +YLDD L+ A + ++ ++ + T L LG
Sbjct: 80 NLVGINFLRKNGIKATLYLDDRLIIITPKSEAHRQKLLEGKEVCKEAWITAATLVALGGF 139
Query: 740 VNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQAL 786
VN++KS+ IP R+++LG D++ + +P + L+ +LQ QAL
Sbjct: 140 VNIEKSEFIPKQRMEFLGFILDSETETIEIPQSRWLALKAKLQ-QAL 185
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L+K D + D + + +P+A ++ CF + G + L FGL +AP + + N
Sbjct: 22 LLKKGDLMVKYDDKRGFHQMPLAEESKKMACFEWGGKKFVNNILCFGLPAAPGIYQNM-N 80
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR+ G++ +YLDD L+
Sbjct: 81 LVGINFLRKNGIKATLYLDDRLI 103
>gi|313236762|emb|CBY12015.1| unnamed protein product [Oikopleura dioica]
Length = 486
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL------SSPGVCPTI 692
L+K D + D + + +P+A ++ CF F ++ ++PG+ +
Sbjct: 210 LLKKGDLMVKYDDKRGFHQMPLAEESKKMACF--EWGGKKFVNNILCFGLPAAPGIYQNM 267
Query: 693 KLG--RRLRERGVRCLVYLDDFLL-------ASQDPIVLKNQILQ----TLQLLTYLGWQ 739
L LR+ G++ +YLDD L+ A + ++ ++ + T L LG
Sbjct: 268 NLVGINFLRKNGIKATLYLDDRLIIITPKSEAHRQKLLEGKEVCKEAWITAATLVALGGF 327
Query: 740 VNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQAL 786
VN++KS+ IP R+++LG D++ + +P + L+ +LQ QAL
Sbjct: 328 VNIEKSEFIPKQRMEFLGFILDSETETIEIPQSRWLALKAKLQ-QAL 373
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L+K D + D + + +P+A ++ CF + G + L FGL +AP + + N
Sbjct: 210 LLKKGDLMVKYDDKRGFHQMPLAEESKKMACFEWGGKKFVNNILCFGLPAAPGIYQNM-N 268
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR+ G++ +YLDD L+
Sbjct: 269 LVGINFLRKNGIKATLYLDDRLI 291
>gi|327268874|ref|XP_003219220.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Anolis carolinensis]
Length = 533
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN+ TT K+ L + + L K +DL +AY + I
Sbjct: 300 DGGLRLCTDFRGLNAICTTNKYPLPLIKDMLAHLSKGKIFTKLDLREAYFRVRIKEGDEW 359
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ--- 429
F +Q L FGL+ AP F QL N +GV LVYLDD L+ S+
Sbjct: 360 KTAFNCPLGQFQYKVLPFGLSGAPGVFMQLINETLHPFLYKGV--LVYLDDILIMSENMG 417
Query: 430 DSVVLKNQIFQTL 442
D + L Q+ Q L
Sbjct: 418 DHIRLVQQVLQKL 430
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 45/216 (20%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG +R + + LN+ TT K+ L + + L K +DL +AY + I
Sbjct: 300 DGGLRLCTDFRGLNAICTTNKYPLPLIKDMLAHLSKGKIFTKLDLREAYFRVRIKEGDEW 359
Query: 667 FLCFLIPMDMSSFRP---SLS-SPGVCPTIKLGRRLRE---RGVRCLVYLDDFLLASQ-- 717
F P+ ++ LS +PGV + + L +GV LVYLDD L+ S+
Sbjct: 360 KTAFNCPLGQFQYKVLPFGLSGAPGVFMQL-INETLHPFLYKGV--LVYLDDILIMSENM 416
Query: 718 -DPIVLKNQILQTLQ----------------LLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
D I L Q+LQ L+ L YLG+ ++ ++ ++ PS D L W
Sbjct: 417 GDHIRLVQQVLQKLREAQLYAKLSKCEFHKSELFYLGFHISQERVRMDPSKVQDVL--DW 474
Query: 761 DTDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHNL 796
+ R R Q Q+ + FY
Sbjct: 475 EAP--------------RTRKQLQSFLGFASFYRQF 496
>gi|397559412|gb|AFO54491.1| reverse transcriptase [Rose yellow vein virus]
Length = 819
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 152/391 (38%), Gaps = 84/391 (21%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K LN + +++ N + L ++++ + + D + +P+ + +
Sbjct: 437 GKARMVINYKPLNLRIRKNAYRIPNKDSLFLAIRESQFYSKFDCKSGFYQVPMEQDSIQL 496
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTI---KLGRRLRERGVRCLVYLDDFLLAS-------- 716
F P+ + P+I K+ L + CLVY+DD ++ S
Sbjct: 497 TAFSTPIGSYEWLVMPFGLATAPSIFQAKMDNVLEDHHDYCLVYIDDIIVFSRTLEEHKI 556
Query: 717 ----------QDPIVLKNQILQ-TLQLLTYLGWQVN----------LKKSQIIPSHRVD- 754
++ IV+ + ++ L + +LG ++ L+ PS D
Sbjct: 557 HVITIAKTLKKNGIVISKKKMELGLTKINFLGCEIENGRIILQNHVLENLSKFPSEIKDK 616
Query: 755 -----YLGI------SWDTDLLQVRLPVDKIPPLRDRL------QTQALIE-LKWFYHNL 796
+LGI + ++ ++R+P+ K L+ Q + ++E +K NL
Sbjct: 617 KELQSFLGIINYAASHYSIEVTKLRVPLQK--KLKKNYIWSWTEQDKQIVEQIKTICQNL 674
Query: 797 TGFTPLHPPVPRTFMSTDASDVGWGAMVG--------------NVS--VQGVWTQAQRSW 840
L + ++TDASD W ++ VS G W Q +++W
Sbjct: 675 PALE-LPKNGDKLVLTTDASDKHWAGVLQFYRKIEQEVFEKDLRVSRYCSGTWNQTEQNW 733
Query: 841 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 900
KEL ++ A+ L L SDN VI +++K L E + I
Sbjct: 734 STFGKELRAIKLALQKF-KLFLFEPFTLYSDNLAVINFLKKD--------LNEKRSQREI 784
Query: 901 MSKLNI-----HIVPYFIPGKCNSLADALSR 926
KL+I + IPG N LADAL+R
Sbjct: 785 RDKLDILQYQGWMTLKHIPGTKNVLADALTR 815
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + +++ N + L ++++ + + D + +P+ + + F
Sbjct: 441 MVINYKPLNLRIRKNAYRIPNKDSLFLAIRESQFYSKFDCKSGFYQVPMEQDSIQLTAFS 500
Query: 378 YKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
Y+ + FGLA+AP F A++ N +L + CLVY+DD ++ S+
Sbjct: 501 TPIGSYEWLVMPFGLATAPSIFQAKMDN----VLEDHHDYCLVYIDDIIVFSR 549
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 30/137 (21%)
Query: 65 MSTDASDVGWGAMVG--------------NVS--VQGVWTQAQRSWHINLKELFTVRAAI 108
++TDASD W ++ VS G W Q +++W KEL ++ A+
Sbjct: 688 LTTDASDKHWAGVLQFYRKIEQEVFEKDLRVSRYCSGTWNQTEQNWSTFGKELRAIKLAL 747
Query: 109 SSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI-----HIV 163
L L SDN VI +++K L E + I KL+I +
Sbjct: 748 QKF-KLFLFEPFTLYSDNLAVINFLKKD--------LNEKRSQREIRDKLDILQYQGWMT 798
Query: 164 PYFIPGKCNSLADALSR 180
IPG N LADAL+R
Sbjct: 799 LKHIPGTKNVLADALTR 815
>gi|189009874|ref|YP_001931967.1| replicase [Eupatorium vein clearing virus]
gi|172041764|gb|ACB69773.1| replicase [Eupatorium vein clearing virus]
Length = 674
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 144/384 (37%), Gaps = 71/384 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G MR V N K+LN + N + + ++ D + + + + +
Sbjct: 294 GKMRMVVNYKALNDATIGDAHNIPNRDSLMALISGKRIFSSFDCKSGFWQVLLDKPSQEL 353
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTI---KLGRRLRERGVRCLVYLDDFLLASQDPIVLKN 724
F P + P I + L E VY+DD L+ S++ +
Sbjct: 354 TAFTCPQGHYQWLVMPFGLKQAPAIFQRHMQIALNEHSAYSCVYIDDILVFSENEKDHEI 413
Query: 725 QILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT---------------------D 763
+ + L LG ++ KKSQ+ +D+LGIS D D
Sbjct: 414 HVSKVLNRCINLGIILSKKKSQLF-KETIDFLGISIDKGTHSPKPHILENIHNFPERFKD 472
Query: 764 LLQVR-------LPVDKIPPL-RDR--LQTQALIELKWFYHN------------LTGFTP 801
+ Q R + IP L R R LQ + + W + + L F
Sbjct: 473 VNQCRKFLGIITYAMRYIPELSRKRMFLQDKLKKNVPWTWTSEDTRLLQKLKLSLKEFPK 532
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ--------------GVWTQAQRSWHINLK 845
LH P P + + TDAS WG ++ + G + QA+ ++H N K
Sbjct: 533 LHIPQPGQQLILETDASQKYWGGILKAEVIHSNNEITEEICCYASGTFKQAELNYHSNEK 592
Query: 846 ELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI--RKQGGLRSHALLAETKKLLLIMSK 903
E+ V +I S P + ++++DNKT+ ++ + + G +S L+ + +
Sbjct: 593 EILAVIRSIQSFPVYLTPVEFIVRTDNKTMEHFLTSKFELGTKSGRLV----RWQMWFKH 648
Query: 904 LNIHIVPYFIPGKCNSLADALSRQ 927
N + I G N LAD LSR+
Sbjct: 649 YNFKV--EHIKGTSNFLADYLSRE 670
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 24/147 (16%)
Query: 53 FTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ--------------GVWTQAQRSWHI 96
F LH P P + + TDAS WG ++ + G + QA+ ++H
Sbjct: 530 FPKLHIPQPGQQLILETDASQKYWGGILKAEVIHSNNEITEEICCYASGTFKQAELNYHS 589
Query: 97 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI--RKQGGLRSHALLAETKKLLLI 154
N KE+ V +I S P + ++++DNKT+ ++ + + G +S L+ + +
Sbjct: 590 NEKEILAVIRSIQSFPVYLTPVEFIVRTDNKTMEHFLTSKFELGTKSGRLV----RWQMW 645
Query: 155 MSKLNIHIVPYFIPGKCNSLADALSRQ 181
N + I G N LAD LSR+
Sbjct: 646 FKHYNFKV--EHIKGTSNFLADYLSRE 670
>gi|115381113|gb|ABI96220.1| unknown [Drosophila erecta]
Length = 887
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 302 NDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAY 361
+ +GHD N L I F + LN K+ + N I L K Y T+DL Y
Sbjct: 77 DKKGHDEQGNKNKRLVIDF--RKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGY 134
Query: 362 CHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVY 420
I +A R F G Y+ L FGL +A F + + +LRE+ G C VY
Sbjct: 135 HQIYLAEHDREKTSFSVNGGKYEFCRLPFGLKNAGSIFQR---AIDDILREQIGKSCYVY 191
Query: 421 LDDFLLASQDS 431
+DD ++ S++
Sbjct: 192 VDDVIIFSENE 202
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 5/157 (3%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G+ R V + + LN K+ + N I L K Y T+DL Y I +A R
Sbjct: 85 GNKNKRLVIDFRKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGYHQIYLAEHDR 144
Query: 666 RFLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRER-GVRCLVYLDDFLLASQDPIV 721
F + F L + G + LRE+ G C VY+DD ++ S++
Sbjct: 145 EKTSFSVNGGKYEFCRLPFGLKNAGSIFQRAIDDILREQIGKSCYVYVDDVIIFSENEND 204
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGI 758
I L+ L +V+ +K+ V+YLG
Sbjct: 205 HVKHIDWVLKSLCDANMKVSNEKTHFF-KQSVEYLGF 240
>gi|443703707|gb|ELU01142.1| hypothetical protein CAPTEDRAFT_219704 [Capitella teleta]
Length = 525
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 730 LQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQALIEL 789
+ LL LG+ +NL+KS + P + +LG+ + +A++EL
Sbjct: 1 MALLRNLGFLINLEKSDLHPKKQFTFLGLE------------------KCIFSEEAILEL 42
Query: 790 KWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSW-HIN 843
+W+ L L P +P MS DAS GWGA G S+ G W R W HIN
Sbjct: 43 RWWSTLLIVIKRLSPALPSVAMSADASGSGWGATWGTRSLAGTWE--ARDWRHIN 95
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 30 LQLLTYLAQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ 89
L+ + +A++EL+W+ L L P +P MS DAS GWGA G S+ G W
Sbjct: 29 LEKCIFSEEAILELRWWSTLLIVIKRLSPALPSVAMSADASGSGWGATWGTRSLAGTWE- 87
Query: 90 AQRSW-HIN 97
R W HIN
Sbjct: 88 -ARDWRHIN 95
>gi|348521920|ref|XP_003448474.1| PREDICTED: hypothetical protein LOC100710857 [Oreochromis
niloticus]
Length = 369
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G MR + +L++LN ++ T KF+++ H + F+Q D+ +IDL AY HIPI HR
Sbjct: 154 GGRGMRAILDLRALNRHLRTYKFRMLTHASLLWFVQAGDWFTSIDLRDAYFHIPIYPPHR 213
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
G+ + +L++LN ++ T KF+++ H + F+Q D+ +IDL AY HIPI HR
Sbjct: 157 GMRAILDLRALNRHLRTYKFRMLTHASLLWFVQAGDWFTSIDLRDAYFHIPIYPPHR 213
>gi|307201692|gb|EFN81403.1| hypothetical protein EAI_09447 [Harpegnathos saltator]
Length = 251
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 47 YHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRA 106
+ N+ F +H + +D S GWGA G G W+ R+ HIN EL
Sbjct: 9 FSNVHQFNVIHSSPYECEIFSDVSLTGWGASCGMQRTHGWWSIEDRALHINALELKAAFH 68
Query: 107 AISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYF 166
A+ + + ++L+ DN T I+YI + G ++ L + + K +I + +
Sbjct: 69 ALKCFALHLHDCRILLRIDNTTAISYINRFGSVQYPLLSDLARDMWKWCEKRHILLFASY 128
Query: 167 IPGKCNSLADALSRQALIPDWHLLPSLTESVFQ 199
I N +ADA SR I D + SL+E F+
Sbjct: 129 IASIDNVIADAESR---ISDTNTEWSLSEQAFR 158
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 793 YHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRA 852
+ N+ F +H + +D S GWGA G G W+ R+ HIN EL
Sbjct: 9 FSNVHQFNVIHSSPYECEIFSDVSLTGWGASCGMQRTHGWWSIEDRALHINALELKAAFH 68
Query: 853 AISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYF 912
A+ + + ++L+ DN T I+YI + G ++ L + + K +I + +
Sbjct: 69 ALKCFALHLHDCRILLRIDNTTAISYINRFGSVQYPLLSDLARDMWKWCEKRHILLFASY 128
Query: 913 IPGKCNSLADALSRQALIPDWHLLPSLTESVFQ 945
I N +ADA SR I D + SL+E F+
Sbjct: 129 IASIDNVIADAESR---ISDTNTEWSLSEQAFR 158
>gi|115381116|gb|ABI96222.1| unknown [Drosophila erecta]
Length = 887
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 302 NDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAY 361
+ +GHD N L I F + LN K+ + N I L K Y T+DL Y
Sbjct: 77 DKKGHDEQGNKNKRLVIDF--RKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGY 134
Query: 362 CHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVY 420
I +A R F G Y+ L FGL +A F + + +LRE+ G C VY
Sbjct: 135 HQIYLAEHDREKTSFSVNGGKYEFCRLPFGLKNAGSIFQR---AIDDILREQIGKSCYVY 191
Query: 421 LDDFLLASQDS 431
+DD ++ S++
Sbjct: 192 VDDVIIFSENE 202
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 5/157 (3%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G+ R V + + LN K+ + N I L K Y T+DL Y I +A R
Sbjct: 85 GNKNKRLVIDFRKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGYHQIYLAEHDR 144
Query: 666 RFLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRER-GVRCLVYLDDFLLASQDPIV 721
F + F L + G + LRE+ G C VY+DD ++ S++
Sbjct: 145 EKTSFSVNGGKYEFCRLPFGLKNAGSIFQRAIDDILREQIGKSCYVYVDDVIIFSENEND 204
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGI 758
I L+ L +V+ +K+ V+YLG
Sbjct: 205 HVKHIDWVLKSLCDANMKVSNEKTHFF-KQSVEYLGF 240
>gi|298111051|gb|ADI57934.1| pol protein [Drosophila melanogaster]
Length = 1024
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 302 NDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAY 361
+ +GHD N L I F + LN K+ + N I L K Y T+DL Y
Sbjct: 214 DKKGHDEQGNKNKRLVIDF--RKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGY 271
Query: 362 CHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVY 420
I +A R F G Y+ L FGL +A F + + V LRE+ G C VY
Sbjct: 272 HQIYLAEHDREKTSFSVNGGKYEFCRLPFGLKNAGSIFQRAIDDV---LREQIGKSCYVY 328
Query: 421 LDDFLLASQDS 431
+DD ++ S++
Sbjct: 329 VDDVIIFSENE 339
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 7/191 (3%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G+ R V + + LN K+ + N I L K Y T+DL Y I +A R
Sbjct: 222 GNKNKRLVIDFRKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGYHQIYLAEHDR 281
Query: 666 RFLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRER-GVRCLVYLDDFLLASQDPIV 721
F + F L + G + LRE+ G C VY+DD ++ S++
Sbjct: 282 EKTSFSVNGGKYEFCRLPFGLKNAGSIFQRAIDDVLREQIGKSCYVYVDDVIIFSENEND 341
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRL 781
I L+ L +V+ +K+ V+YLG + +K+ +++
Sbjct: 342 HVKHIDWVLKSLCDANMKVSNEKTHFF-KQSVEYLGFIVTNG--GAKTDPEKVKAIKEYP 398
Query: 782 QTQALIELKWF 792
+ L EL+ F
Sbjct: 399 EPTNLYELRSF 409
>gi|298111054|gb|ADI57937.1| pol protein [Drosophila melanogaster]
Length = 1024
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 302 NDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAY 361
+ +GHD N L I F + LN K+ + N I L K Y T+DL Y
Sbjct: 214 DKKGHDEQGNKNKRLVIDF--RKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGY 271
Query: 362 CHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVY 420
I +A R F G Y+ L FGL +A F + + V LRE+ G C VY
Sbjct: 272 HQIYLAEHDREKTSFSVNGGKYEFCRLPFGLKNAGSIFQRAIDDV---LREQIGKSCYVY 328
Query: 421 LDDFLLASQDS 431
+DD ++ S++
Sbjct: 329 VDDVIIFSENE 339
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 7/191 (3%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
G+ R V + + LN K+ + N I L K Y T+DL Y I +A R
Sbjct: 222 GNKNKRLVIDFRKLNEKTIADKYPMPNIPMILANLGKAKYFTTLDLKSGYHQIYLAEHDR 281
Query: 666 RFLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRER-GVRCLVYLDDFLLASQDPIV 721
F + F L + G + LRE+ G C VY+DD ++ S++
Sbjct: 282 EKTSFSVNGGKYEFCRLPFGLKNAGSIFQRAIDDVLREQIGKSCYVYVDDVIIFSENEND 341
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRL 781
I L+ L +V+ +K+ V+YLG + +K+ +++
Sbjct: 342 HVKHIDWVLKSLCDANMKVSNEKTHFF-KQSVEYLGFIVTNG--GAKTDPEKVKAIKEYP 398
Query: 782 QTQALIELKWF 792
+ L EL+ F
Sbjct: 399 EPTNLYELRSF 409
>gi|307214533|gb|EFN89530.1| hypothetical protein EAI_13359 [Harpegnathos saltator]
Length = 117
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 49/107 (45%)
Query: 45 WFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTV 104
W H L P+ + +DAS GWG + G W + +R HIN EL
Sbjct: 1 WESHILRSVNPIRQQQYSLEVFSDASMTGWGTACNGETTCGTWNEFERKSHINYLELKGA 60
Query: 105 RAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 151
A+ + N ++L+ DN T I+YI + GG+R L TK++
Sbjct: 61 FYALKCFANNKHNCEILLRIDNTTAISYINRIGGIRFQKLTEITKEI 107
Score = 55.8 bits (133), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 49/107 (45%)
Query: 791 WFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTV 850
W H L P+ + +DAS GWG + G W + +R HIN EL
Sbjct: 1 WESHILRSVNPIRQQQYSLEVFSDASMTGWGTACNGETTCGTWNEFERKSHINYLELKGA 60
Query: 851 RAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 897
A+ + N ++L+ DN T I+YI + GG+R L TK++
Sbjct: 61 FYALKCFANNKHNCEILLRIDNTTAISYINRIGGIRFQKLTEITKEI 107
>gi|47211608|emb|CAF95469.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1238
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 152/418 (36%), Gaps = 75/418 (17%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
DG+ RP + + LN+ ++ + + Q + L + +DL + Y +P+
Sbjct: 443 ADGSWRPCGDFRRLNNITAHDRYPIPHIQDFSIRLAGATIFSKVDLVRGYHQVPVRAEDV 502
Query: 666 RFLCFLIPMDMSSF-RPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPI 720
+ P + F R G T + RL + +R L VYLDD L+AS
Sbjct: 503 PKTAVITPFGLFEFLRMPFGLKGAAQTFQ---RLMDSVLRGLTFVFVYLDDILVASPSAD 559
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP-----VDKIP 775
+ Q Q L G VN K Q +D+LG ++ V LP V + P
Sbjct: 560 EHLTHLGQVFQRLADHGLIVNPAKCQ-FGLQVIDFLGHRISSE-GAVPLPAKVQVVAEFP 617
Query: 776 ------------------------------PLRDRLQ-TQALIELKWFYHNLTGF----- 799
PL + L+ +A ++ W + F
Sbjct: 618 RPASVKALQEFLGMVNFYNRFLPRAAHLLQPLYEALRLKKATDQVDWTAERVQAFEGAKS 677
Query: 800 -----TPLHPPVPRT--FMSTDASDVGWGAMVGNVSVQGVWT----------QAQRSWHI 842
T L P PR ++TDASDV GA+V V GVW +R + +
Sbjct: 678 ALANATLLAHPAPRADIALTTDASDVAVGAVV-EQGVGGVWQPLAFFSRKLRDNERKYSV 736
Query: 843 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMS 902
+EL + A L+ + D+K + + K S A ++ L +S
Sbjct: 737 FDRELLALYLATRHFRFLLEGRSFTAYVDHKPLTFAMSKV----SEPWSARQQRHLAAVS 792
Query: 903 KLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWGTISSCTEHQGTG 960
+ I + GK N +AD LSR + P + L + + Q E GTG
Sbjct: 793 EFTTDI--RHVAGKANPVADCLSRVLVCPVYLGLDFASMAADQSGDQEIRALESAGTG 848
>gi|313228592|emb|CBY07384.1| unnamed protein product [Oikopleura dioica]
Length = 674
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL------SSPGVCPTI 692
L+K D + D + + +P+A ++ CF F ++ ++PG+ ++
Sbjct: 148 LLKKGDLMVKFDDKRGFHQMPLAEESKKMACF--EWGGKKFVNNILCFGLPAAPGIYQSM 205
Query: 693 KLG--RRLRERGVRCLVYLDDFLL-------ASQDPIVLKNQILQ----TLQLLTYLGWQ 739
L LR+ G++ +YLDD L+ A + ++ ++ + T L LG
Sbjct: 206 NLVGINFLRKNGIKATLYLDDRLVVITPKSEAHRLRLLEGKEVCKEAWVTAATLVALGGF 265
Query: 740 VNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQAL 786
VN++KS+ IP R+++LG D++ + +P + L+ +LQ QAL
Sbjct: 266 VNIEKSEFIPKQRMEFLGFILDSETETIEIPQSRWLALKAKLQ-QAL 311
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L+K D + D + + +P+A ++ CF + G + L FGL +AP + Q N
Sbjct: 148 LLKKGDLMVKFDDKRGFHQMPLAEESKKMACFEWGGKKFVNNILCFGLPAAPGIY-QSMN 206
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR+ G++ +YLDD L+
Sbjct: 207 LVGINFLRKNGIKATLYLDDRLV 229
>gi|308500992|ref|XP_003112681.1| hypothetical protein CRE_30766 [Caenorhabditis remanei]
gi|308267249|gb|EFP11202.1| hypothetical protein CRE_30766 [Caenorhabditis remanei]
Length = 838
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 32/193 (16%)
Query: 610 MRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 669
+R + +L LN ++ +F+ + + + FL + Y AT D Y HI I+ L
Sbjct: 286 LRLILDLSKLNKGLSPARFRQEDWKTVWPFLSEACYAATFDFRSGYHHIKISEASSDLLA 345
Query: 670 FLIPMDMSSFRPSLSSPGVCPTIKLGR---------------------RLRERGVRCLVY 708
F SLS P P +K R R G+ +Y
Sbjct: 346 F-----------SLSDPPSSPFLKFNALPFGLSTAPWLFTKIFRPLVGRWRAAGINIFLY 394
Query: 709 LDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVR 768
LDD L+ ++ + + + L G V KS +PS + +LGI D VR
Sbjct: 395 LDDGLILAKTREEAERAVRMVREDLKAAGVCVAEDKSNWVPSAQFTWLGIRGDLSERTVR 454
Query: 769 LPVDKIPPLRDRL 781
L + LRD++
Sbjct: 455 LTGKRENSLRDQI 467
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L ++ +L LN ++ +F+ + + + FL + Y AT D Y HI I+ L
Sbjct: 286 LRLILDLSKLNKGLSPARFRQEDWKTVWPFLSEACYAATFDFRSGYHHIKISEASSDLLA 345
Query: 376 FLY----KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F + L FGL++AP F ++ + R G+ +YLDD L+
Sbjct: 346 FSLSDPPSSPFLKFNALPFGLSTAPWLFTKIFRPLVGRWRAAGINIFLYLDDGLI 400
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 61 PRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ------RSWHINLKELFTVRAAISSNPSL 114
P+ F+ TDAS G GA++ N S Q V ++ ++ L+EL V A+ S
Sbjct: 557 PQWFLFTDASAEGLGAVLKNGSGQTVMRMSELGGTGFQNESSALRELRAVLMAVERMASW 616
Query: 115 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPY-FIPGKCNS 173
V++ +D++ + +RK R+ +AE + S +I Y +IP + N
Sbjct: 617 -KRGAVLIHTDSQAAVIILRKGSMKRALQSVAER----VWESLRSIGQAKYIWIPREQNK 671
Query: 174 LADALSRQALIPDWHLLPSLTESVFQRWGIESCAALCDPES 214
AD SR DW + E +RWG C D ++
Sbjct: 672 EADEASRDFDYDDWAVQNWAFEWAQKRWGEVKCDWFADEQN 712
>gi|384493421|gb|EIE83912.1| hypothetical protein RO3G_08617 [Rhizopus delemar RA 99-880]
Length = 666
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 29/144 (20%)
Query: 728 QTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQALI 787
+TL L LG+ +N KKS + P ++LG ++T +Q+ LP K+ + R++ + L
Sbjct: 10 ETLAHLKNLGFLINYKKSSLQPQKIQEFLGFQFNTSTMQITLPQQKLKKIVSRIRQRDLA 69
Query: 788 ----------------------ELKWFYHNLTG---FTPLHPP---VPRTFMSTDASDVG 819
+LKW + N +G P+H P + DASD G
Sbjct: 70 KSLHVHHQNWESPCQLTRKSFEDLKW-WENFSGQHNGLPIHKEDFKTPAIDIYVDASDSG 128
Query: 820 WGAMVGNVSVQGVWTQAQRSWHIN 843
+G + G WT+ ++S IN
Sbjct: 129 YGVSSAELETHGFWTKEEQSTSIN 152
>gi|130590|sp|P03555.1|POL_CAMVC RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
Length = 679
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 140/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + + R
Sbjct: 298 GKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPL 357
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 358 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 416
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 417 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 476
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 477 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPP 536
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A+R++H N KE
Sbjct: 537 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERNYHSNDKE 596
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 597 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 654
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 655 DV--EHIKGTDNHFADFLSRE 673
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+R+
Sbjct: 530 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERN 589
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 590 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 647
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 648 WLSHYSFDV--EHIKGTDNHFADFLSRE 673
>gi|400820|sp|Q02964.1|POL_CAMVE RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
gi|293185|gb|AAA62375.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 140/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + + R
Sbjct: 298 GKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPL 357
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 358 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 416
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 417 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 476
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 477 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPP 536
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A+R++H N KE
Sbjct: 537 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERNYHSNDKE 596
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 597 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 654
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 655 DV--EHIKGTDNHFADFLSRE 673
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+R+
Sbjct: 530 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAERN 589
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 590 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 647
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 648 WLSHYSFDV--EHIKGTDNHFADFLSRE 673
>gi|189242337|ref|XP_001810078.1| PREDICTED: similar to orf [Tribolium castaneum]
gi|270016528|gb|EFA12974.1| hypothetical protein TcasGA2_TC004277 [Tribolium castaneum]
Length = 1399
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L N Y T+DL+ Y +P+A+ R F+ Y+ + FGL +AP F +L N
Sbjct: 589 LLSGNGYFTTLDLASGYMQVPVAKESRHLTSFVTTTGQYEFNRMPFGLVNAPSVFNRLMN 648
Query: 405 WVAVLLRERGVRCLVYLDDFLLASQ 429
V + RGV +Y+DD L+ S+
Sbjct: 649 MVTRKI-GRGV-VTIYMDDILIPSK 671
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 33/262 (12%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKF---KLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARR 663
DG+ R + + LN+ +T K++ ++I+ Q L N Y T+DL+ Y +P+A+
Sbjct: 557 DGSNRLCIDYRRLNA-ITVKEYVPMQIIDEQLD--LLSGNGYFTTLDLASGYMQVPVAKE 613
Query: 664 HRRFLCFLIPMDMSSFRPS----LSSPGV------CPTIKLGRRLRERGVRCLVYLDDFL 713
R F+ F +++P V T K+G RGV +Y+DD L
Sbjct: 614 SRHLTSFVTTTGQYEFNRMPFGLVNAPSVFNRLMNMVTRKIG-----RGV-VTIYMDDIL 667
Query: 714 LASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDK 773
+ S+ ++ LQ + LG + L K + + + +++YLG ++ D VR K
Sbjct: 668 IPSKTVGEGLEKLTLVLQTIRDLGLTLKLSKCRFLFT-KLEYLG--YEIDANGVRPGSRK 724
Query: 774 IPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVW 833
+ + D + + E++ F F R F+ A + ++ + +W
Sbjct: 725 VNAITDFPRPTNVHEVRQFLGLCNFF--------RRFVQDYAKIARYLTLLTKNDQRFIW 776
Query: 834 TQAQRSWHINLKELFTVRAAIS 855
++ Q + + LK++ + + +S
Sbjct: 777 SEDQENAFLTLKKILSEKPILS 798
>gi|384499549|gb|EIE90040.1| hypothetical protein RO3G_14751 [Rhizopus delemar RA 99-880]
Length = 196
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 701 RGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
+ R YLDD++LA+ + Q+L + LL LGW VN KKS + P+ ++ +LG
Sbjct: 75 QSFRISAYLDDWILAASTKQLAIQQVLAVVALLQQLGWMVNFKKSILTPTQQLGHLGFVS 134
Query: 761 DTDLLQVRLPVDKIPPLRDRLQTQAL 786
+T + LP+ K+ +R ++ QAL
Sbjct: 135 NTSTMTASLPMKKLRDIRRSIK-QAL 159
>gi|384489900|gb|EIE81122.1| hypothetical protein RO3G_05827 [Rhizopus delemar RA 99-880]
Length = 595
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 781 LQTQALIELKWF--YHNLTGFTPLH--PP---VPRTFMSTDASDVGWGAMVGNVSVQGVW 833
L T +L +L+W+ + + P+H PP +P+ + DAS+ GW + G W
Sbjct: 124 LSTHSLQDLQWWEKWSTVKNGLPIHVTPPEILMPKLTIHVDASNTGWRVKSNVMETSGFW 183
Query: 834 TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHA 889
T+ ++ IN++EL T+ A+ + T+ + SDNKT + Y++ ++ ++
Sbjct: 184 TEEEKETSINVRELQTIYFALKLQARNAKDSTIHIFSDNKTALKYVQFDSNIQPYS 239
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 114/281 (40%), Gaps = 34/281 (12%)
Query: 39 ALIELKWF--YHNLTGFTPLH--PP---VPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ 91
+L +L+W+ + + P+H PP +P+ + DAS+ GW + G WT+ +
Sbjct: 128 SLQDLQWWEKWSTVKNGLPIHVTPPEILMPKLTIHVDASNTGWRVKSNVMETSGFWTEEE 187
Query: 92 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAE-TKK 150
+ IN++EL T+ A+ + T+ + SDNKT + Y++ ++ ++ E T +
Sbjct: 188 KETSINVRELQTIYFALKLQARNAKDSTIHIFSDNKTALKYVQFDSNIQPYSGNQEYTSR 247
Query: 151 LLLIMSK--LNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWGIESCAA 208
+ S L + + + + +R I D +E+V +
Sbjct: 248 PIESTSNPALRMETTKEMVQENNSQMGSPFNR--CICD--ETKQASENVLEL-------- 295
Query: 209 LCDPESPGQQGGIHRCLLKKVGFQASVGLPAPASTSSSIASL-ERRPGLICNSSSSVAEG 267
G G C+ + F+ S+ PA IA L E + ++++ +
Sbjct: 296 -----DAGSGGSGDECIQSDLAFEGSISEPALEINPQGIALLQETKNTRSSTGNTTMDDS 350
Query: 268 LLVSRLEGAGNSPPN-NGSRPQIASDRSSNGLLSGNDRGHD 307
+LV P N N ++ ++ S R L +G D
Sbjct: 351 ILVPNDTTDDEGPTNSNETKQEVVSSR-----LEAIQKGQD 386
>gi|300701665|ref|XP_002995003.1| hypothetical protein NCER_102284 [Nosema ceranae BRL01]
gi|239603546|gb|EEQ81332.1| hypothetical protein NCER_102284 [Nosema ceranae BRL01]
Length = 524
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ ++ NL +LN V +KL N + + Q +Y+ DL + + I I + +
Sbjct: 1 IRLVSNLIALNDIVKKDNYKLANIRDVIRATQGANYMTVFDLKEGFYSIEIEEKDKHKTA 60
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS---QDSV 432
F + G Y+ + G ++PQ ++ + V L+ +GV +Y+DD ++ S +D
Sbjct: 61 FEFNGKAYEWNSMVMGYKNSPQILQRIMDRVFRDLKGKGVE--IYMDDIVVYSKSIEDHD 118
Query: 433 VLKNQIFQTLPVN 445
+ N++ + L N
Sbjct: 119 KIVNEVLRRLSEN 131
>gi|55250909|emb|CAH68829.1| polyprotein [Carnation etched ring virus]
Length = 656
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 125/342 (36%), Gaps = 65/342 (19%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N L N ++ ++ ++ D + + + + +
Sbjct: 279 GKKRMVVNYKAMNKATKGDAHNLPNKDELLALVRGKKIYSSFDCKSGFWQVLLDKESQLL 338
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTI---KLGRRLRERGVRCLVYLDDFLLASQDPIVLKN 724
F P + P+I + + C VY+DD L+ S
Sbjct: 339 TAFTCPQGHYQWNVVPFGLKQAPSIFQRHMQTAFNQHSKYCCVYVDDILVFSNTEEEHYI 398
Query: 725 QILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGIS-----------------------WD 761
+L L+ LG ++ KK+Q+ ++++LG+ D
Sbjct: 399 HVLNILRRCEKLGIILSKKKAQLF-KEKINFLGLEIDQGTHCPQNHILEHIHKFPDRIED 457
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFYH------------NLTGFTP 801
LQ L + D IP L R LQ++ + W ++ NL F
Sbjct: 458 KKQLQRSLGILTYASDYIPKLASIRKPLQSKLKEDSTWTWNDTDSQYMAKIKKNLKSFPK 517
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVS---------VQGVWTQAQRSWHINLKELFTV 850
L+ P P + + TDAS+ WG ++ + G + A+R++H N KEL V
Sbjct: 518 LYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERNYHSNEKELLAV 577
Query: 851 RAAISSNPSLVANHTVVLQSDNKTVIAYI-------RKQGGL 885
I + +++SDNK ++ RKQG L
Sbjct: 578 FRVIYKFSIYLTPCRFLIRSDNKNFTHFVNINLKGDRKQGRL 619
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVS---------VQGVWTQAQRSWHIN 97
NL F L+ P P + + TDAS+ WG ++ + G + A+R++H N
Sbjct: 511 NLKSFPKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERNYHSN 570
Query: 98 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI-------RKQGGL 139
KEL V I + +++SDNK ++ RKQG L
Sbjct: 571 EKELLAVFRVIYKFSIYLTPCRFLIRSDNKNFTHFVNINLKGDRKQGRL 619
>gi|58699442|ref|ZP_00374187.1| pol protein [Wolbachia endosymbiont of Drosophila ananassae]
gi|58534040|gb|EAL58294.1| pol protein [Wolbachia endosymbiont of Drosophila ananassae]
Length = 492
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I+ + + LN KF + N + I L + Y +TIDL++ + I + + R F
Sbjct: 175 IVIDYRKLNENTVDDKFPIPNIEGILDKLGRAQYFSTIDLAKGFHQILVQEQDREKTAFS 234
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
Y+ + FGL +AP F +L N VL E C+VYLDD L+ S
Sbjct: 235 TPHGHYEFNRMPFGLKNAPATFQRLIN--TVLKEEINKICVVYLDDVLIFS 283
>gi|270012874|gb|EFA09322.1| hypothetical protein TcasGA2_TC001648 [Tribolium castaneum]
Length = 1388
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L N Y T+DL+ Y +P+A+ R F+ Y+ + FGL +AP F +L N
Sbjct: 482 LLSGNGYFTTLDLASGYMQVPVAKESRHLTSFVTTTGQYEFNRMPFGLVNAPSVFNRLMN 541
Query: 405 WVAVLLRERGVRCLVYLDDFLLASQ 429
V + RGV +Y+DD L+ S+
Sbjct: 542 MVTRKIG-RGV-VTIYMDDILIPSK 564
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 23/257 (8%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKF---KLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARR 663
DG+ R + + LN+ +T K++ ++I+ Q L N Y T+DL+ Y +P+A+
Sbjct: 450 DGSNRLCIDYRRLNA-ITVKEYVPMQIIDEQLD--LLSGNGYFTTLDLASGYMQVPVAKE 506
Query: 664 HRRFLCFLIPMDMSSFRPS----LSSPGVCPT-IKLGRRLRERGVRCLVYLDDFLLASQD 718
R F+ F +++P V + + R RGV +Y+DD L+ S+
Sbjct: 507 SRHLTSFVTTTGQYEFNRMPFGLVNAPSVFNRLMNMVTRKIGRGV-VTIYMDDILIPSKT 565
Query: 719 PIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
++ L+ + LG + L K + + + +++YLG ++ D VR K+ +
Sbjct: 566 VGKGLEKLTLVLKTIRDLGLTLKLSKCRFLFT-KLEYLG--YEIDANGVRPSSRKVNAIT 622
Query: 779 DRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQR 838
D + + E++ F F R F+ A ++ + +W++ Q
Sbjct: 623 DFPRPTNVHEVRQFLGLCNFF--------RRFVQDYAKIARHLTLLTKNDQRFIWSEDQA 674
Query: 839 SWHINLKELFTVRAAIS 855
+ + LK++ + + +S
Sbjct: 675 NAFLPLKKILSEKPILS 691
>gi|342365298|gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
Length = 673
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 151/382 (39%), Gaps = 70/382 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K LN L N Q++ L+ ++ D + + + + ++
Sbjct: 293 GKKRMVVNYKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKL 352
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLASQDPIVLK 723
F P +R P+I R ++ RG+ CLVY+DD ++ S
Sbjct: 353 TAFTCPQGHFQWRVVPFGLKQAPSI-FQRHMQNALRGLEEFCLVYVDDIIVFSDKEEEHY 411
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT-----------------DLLQ 766
+L+ L+ + LG ++ KK+ + ++++LG+ D D L+
Sbjct: 412 THVLKVLKRIESLGIILSKKKTNLF-KEKINFLGLEIDRGTHTPQNHILEHLHNFPDRLE 470
Query: 767 VRLPVDK-----------IPPLRDR---LQTQALIELKWFYHN------------LTGFT 800
+ + + IP L ++ LQ + + W ++ L F
Sbjct: 471 DKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWNQSDTDYVKKIKKGLVNFP 530
Query: 801 PLHPPVPRT--FMSTDASDVGWGAMV------GNVSV----QGVWTQAQRSWHINLKELF 848
L+ P + TDASD WG ++ GN + G + A+ ++H N KEL
Sbjct: 531 KLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAELNYHSNEKELL 590
Query: 849 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
V+ I+ + T +++DN ++ + + ++K+ LI ++ +
Sbjct: 591 AVKQVITKFSIYLTPVTFTVRTDNVNLLK------RFMNTKITGDSKQGRLIRWQMWLSH 644
Query: 909 VPY---FIPGKCNSLADALSRQ 927
+ + G+ N LAD L+R+
Sbjct: 645 YTFNVNHLKGEKNVLADYLTRE 666
>gi|384496879|gb|EIE87370.1| hypothetical protein RO3G_12081 [Rhizopus delemar RA 99-880]
Length = 571
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ T+D++ Y +P+A F+ K +Y+ + FGL SAP F + N ++L
Sbjct: 216 FFTTMDMAFGYWQVPMAEDSIEKTGFVTKKGIYEFLVMPFGLTSAPSTFQAMMN--SILG 273
Query: 411 RERGVRCLVYLDDFLLASQDSVVLKNQIFQTLPVNLSGNCSRSGRR 456
G CLV++DD L+ DS++ + + + + C +GR+
Sbjct: 274 EYIGKFCLVFIDDVLIFGGDSLMEHGALVEKVLI----KCKDAGRK 315
>gi|301603955|ref|XP_002931647.1| PREDICTED: uncharacterized protein KIAA0467-like [Xenopus
(Silurana) tropicalis]
Length = 3874
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 662 RRHRRFLCFLI----------PMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDD 711
+ H RFL F + P +++ P + + + P + L LR +G+ YLDD
Sbjct: 652 KAHHRFLRFAVLGKHFQFVALPFGLAT-TPRVFTKVLAPIMAL---LRSQGISITPYLDD 707
Query: 712 FLLAS---QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVR 768
L+ + + NQ++QTLQ GW +NLKKS + PS + +LG ++T
Sbjct: 708 LLIKAPTFHQNLSALNQVIQTLQ---SHGWIINLKKSSLTPSQEMTFLGTVFNTQRCLTL 764
Query: 769 LPVDKIPPLRDRLQT 783
LP DK+ L R Q+
Sbjct: 765 LPPDKVQALLLRAQS 779
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 866 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 925
+ +Q+DN T +AY+ QGG RS + E +L + + I IPG N AD LS
Sbjct: 903 IRIQTDNATAVAYVNHQGGTRSKGAMQEAAHILAWAEENVLAISAIHIPGVDNWTADFLS 962
Query: 926 RQALIP-DWHLLPSLTESVFQRWGT 949
R+ L +W L P + +++ WGT
Sbjct: 963 RETLDQGEWALHPQVFQNLTSIWGT 987
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 120 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 179
+ +Q+DN T +AY+ QGG RS + E +L + + I IPG N AD LS
Sbjct: 903 IRIQTDNATAVAYVNHQGGTRSKGAMQEAAHILAWAEENVLAISAIHIPGVDNWTADFLS 962
Query: 180 RQALIP-DWHLLPSLTESVFQRWG 202
R+ L +W L P + +++ WG
Sbjct: 963 RETLDQGEWALHPQVFQNLTSIWG 986
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 368 RRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
+ H RFL F G +Q L FGLA+ P+ F ++ + LLR +G+ YLDD L+
Sbjct: 652 KAHHRFLRFAVLGKHFQFVALPFGLATTPRVFTKVLAPIMALLRSQGISITPYLDDLLIK 711
Query: 428 S---QDSVVLKNQIFQTL 442
+ ++ NQ+ QTL
Sbjct: 712 APTFHQNLSALNQVIQTL 729
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 469 VVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 528
+ +Q+DN T + Y+ Q G RS + E +L + + I IPG N AD LS
Sbjct: 903 IRIQTDNATAVAYVNHQGGTRSKGAMQEAAHILAWAEENVLAISAIHIPGVDNWTADFLS 962
Query: 529 RQALIP-DWHLLPSLTESVFPRWGSRVVPLYVTRN 562
R+ L +W L P + +++ WG+ V L +R+
Sbjct: 963 RETLDQGEWALHPQVFQNLTSIWGTPEVDLMASRH 997
>gi|384501230|gb|EIE91721.1| hypothetical protein RO3G_16432 [Rhizopus delemar RA 99-880]
Length = 359
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 654 AYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPT--IKLGRRL----RERGVRCLV 707
A+ H+ + R++L F+ + FR + + P K R + R++G+R
Sbjct: 185 AFLHLHLHPSSRKYLRFVWQNRLFQFRTTPFGLNIVPFWFTKTTRLIVQWARQQGIRLSA 244
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQV 767
YLDD+++ + + + + + L L LGW VN +KS PS +++LG +T +Q
Sbjct: 245 YLDDWIIMGETKEIFQRHLQKVLSCLRNLGWLVNDEKSNFEPSPTIEHLGFVLNTITMQA 304
Query: 768 RLPVDKIPPLRD 779
LP K LRD
Sbjct: 305 SLPGKK---LRD 313
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 43/83 (51%)
Query: 360 AYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLV 419
A+ H+ + R++L F+++ ++Q FGL P F + + + R++G+R
Sbjct: 185 AFLHLHLHPSSRKYLRFVWQNRLFQFRTTPFGLNIVPFWFTKTTRLIVQWARQQGIRLSA 244
Query: 420 YLDDFLLASQDSVVLKNQIFQTL 442
YLDD+++ + + + + + L
Sbjct: 245 YLDDWIIMGETKEIFQRHLQKVL 267
>gi|313244116|emb|CBY14967.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 22/167 (13%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL------SSPGVCPTI 692
L+K D + D + + +P+A ++ CF F ++ ++PG+ ++
Sbjct: 210 LLKKGDLMVKFDDKRGFHQMPLAEESKKMACF--EWGGKKFVNNILCFGLPAAPGIYQSM 267
Query: 693 KLG--RRLRERGVRCLVYLDDFLL-------ASQDPIVLKNQILQ----TLQLLTYLGWQ 739
L LR+ G++ +YLDD L+ A + ++ ++ + T L LG
Sbjct: 268 NLVGINFLRKNGIKATLYLDDRLVVITPKSEAHRLRLLEGKEVCKEAWVTAATLVALGGF 327
Query: 740 VNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQAL 786
VN++KS+ IP R+++LG D++ + +P + L+ +LQ QAL
Sbjct: 328 VNIEKSEFIPKQRMEFLGFILDSETETIEIPQSRWLALKTKLQ-QAL 373
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L+K D + D + + +P+A ++ CF + G + L FGL +AP + Q N
Sbjct: 210 LLKKGDLMVKFDDKRGFHQMPLAEESKKMACFEWGGKKFVNNILCFGLPAAPGIY-QSMN 268
Query: 405 WVAV-LLRERGVRCLVYLDDFLL 426
V + LR+ G++ +YLDD L+
Sbjct: 269 LVGINFLRKNGIKATLYLDDRLV 291
>gi|189242428|ref|XP_001808069.1| PREDICTED: similar to protease, reverse transcriptase and RNase H
[Tribolium castaneum]
Length = 553
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-AVL 409
Y++TIDL +Y IP++ R++ FLY G Y L FGL +A +F++ + V
Sbjct: 402 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTE 461
Query: 410 LRERGVRCLVYLDDFLLASQ 429
+RE V Y+DD L+AS+
Sbjct: 462 VREFVVN---YIDDLLVASE 478
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + +NS + ++ Y++TIDL +Y IP++ R+
Sbjct: 364 DGTVRICLDARMINSKMIADCESPPAADELLRRFHGIRYMSTIDLRSSYWQIPLSPESRQ 423
Query: 667 FLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLAS 716
+ FL +P + + S S + LG +RE V Y+DD L+AS
Sbjct: 424 YTAFLYNGRSYTYQVLPFGLKTAVGSFSR---AMDVVLGTEVREFVVN---YIDDLLVAS 477
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ + Q + L ++NL+KS I V +LG
Sbjct: 478 ETLNEHLEHLRQVFEKLKQARMKINLEKSNFI-QKEVKFLG 517
>gi|427798439|gb|JAA64671.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 926
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LN + L LQ ++ +++DL Y +P+A R
Sbjct: 124 DGSIRFCVDYRRLNKITRKDVYPLPRIDDALDCLQGAEFFSSLDLRSGYWQVPMAEADRS 183
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE---RGVR---CLVYLDDFLLASQDPI 720
F+ P + F ++ G+C R+ + RG++ CL YLDD ++ S D
Sbjct: 184 KTAFVTPDGLYEF--TVMPFGLCNAPATFERMMDATLRGLKWNTCLCYLDDVVVFSTDFA 241
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQI 747
++ Q L L+ G Q+NLKK +
Sbjct: 242 SHLTRLEQVLTCLSTAGLQLNLKKCRF 268
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ ++ +++DL Y +P+A R F+ +Y+ T + FGL +AP F ++ +
Sbjct: 157 LQGAEFFSSLDLRSGYWQVPMAEADRSKTAFVTPDGLYEFTVMPFGLCNAPATFERMMD- 215
Query: 406 VAVLLRERGVRCLVYLDDFLLASQD 430
A L + CL YLDD ++ S D
Sbjct: 216 -ATLRGLKWNTCLCYLDDVVVFSTD 239
>gi|308500876|ref|XP_003112623.1| hypothetical protein CRE_30767 [Caenorhabditis remanei]
gi|308267191|gb|EFP11144.1| hypothetical protein CRE_30767 [Caenorhabditis remanei]
Length = 1077
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 32/193 (16%)
Query: 610 MRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 669
+R + +L LN ++ +F+ + + + FL + Y AT D Y H+ I+ L
Sbjct: 525 LRLILDLSKLNKGLSPARFRQEDWKTVWPFLSEACYAATFDFRSGYHHVKISEASSDLLA 584
Query: 670 FLIPMDMSSFRPSLSSPGVCPTIKLGR---------------------RLRERGVRCLVY 708
F SLS P P +K R R G+ +Y
Sbjct: 585 F-----------SLSDPPSSPFLKFNALPFGLSTAPWLFTKIFRPLVGRWRAAGINIFLY 633
Query: 709 LDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVR 768
LDD L+ ++ + ++ + L G V KS PS + +LGI D VR
Sbjct: 634 LDDGLILAKTREEAERAVIMVREDLKAAGVCVAEDKSNWEPSAQFTWLGIRGDLTERTVR 693
Query: 769 LPVDKIPPLRDRL 781
L + LRD++
Sbjct: 694 LTEKRENSLRDQI 706
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L ++ +L LN ++ +F+ + + + FL + Y AT D Y H+ I+ L
Sbjct: 525 LRLILDLSKLNKGLSPARFRQEDWKTVWPFLSEACYAATFDFRSGYHHVKISEASSDLLA 584
Query: 376 FLY----KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F + L FGL++AP F ++ + R G+ +YLDD L+
Sbjct: 585 FSLSDPPSSPFLKFNALPFGLSTAPWLFTKIFRPLVGRWRAAGINIFLYLDDGLI 639
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 61 PRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ------RSWHINLKELFTVRAAISSNPSL 114
P+ F+ TDAS G GA++ N S Q V ++ ++ L+EL V+ A+ S
Sbjct: 796 PQWFLFTDASAEGLGAVLKNGSGQTVMKMSELGGTGFQNESSALRELRAVQMAVERMASW 855
Query: 115 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPY-FIPGKCNS 173
V++ +D++ + +RK R+ ++AE + S +I + +IP + N
Sbjct: 856 -KRGAVLIHTDSQAAVIILRKGSMRRTLQIVAER----VWESLRSIGQAKFIWIPREQNK 910
Query: 174 LADALSRQALIPDWHLLPSLTESVFQRWGIESCAALCDPES 214
AD SR DW + E +RWG C D ++
Sbjct: 911 EADEASRDFDYDDWAVQNWAFEWAQKRWGEVKCDWFADEQN 951
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 807 PRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ------RSWHINLKELFTVRAAISSNPSL 860
P+ F+ TDAS G GA++ N S Q V ++ ++ L+EL V+ A+ S
Sbjct: 796 PQWFLFTDASAEGLGAVLKNGSGQTVMKMSELGGTGFQNESSALRELRAVQMAVERMASW 855
Query: 861 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPY-FIPGKCNS 919
V++ +D++ + +RK R+ ++AE + S +I + +IP + N
Sbjct: 856 -KRGAVLIHTDSQAAVIILRKGSMRRTLQIVAER----VWESLRSIGQAKFIWIPREQNK 910
Query: 920 LADALSRQALIPDWHLLPSLTESVFQRWGTI 950
AD SR DW + E +RWG +
Sbjct: 911 EADEASRDFDYDDWAVQNWAFEWAQKRWGEV 941
>gi|331554|gb|AAA21736.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 680
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 122/333 (36%), Gaps = 62/333 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + + R
Sbjct: 299 GKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPL 358
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 359 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 417
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 418 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 477
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 478 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPP 537
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A+R++H N KE
Sbjct: 538 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGINTELICRYASGSFKAAERNYHSNDKE 597
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI 879
V I + + ++DN +++
Sbjct: 598 TLAVINTIKKFSIYLTPAHFLTRTDNTHFKSFV 630
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+R+
Sbjct: 531 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGINTELICRYASGSFKAAERN 590
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI 133
+H N KE V I + + ++DN +++
Sbjct: 591 YHSNDKETLAVINTIKKFSIYLTPAHFLTRTDNTHFKSFV 630
>gi|241957355|ref|XP_002421397.1| retrotransposon polyprotein, putative [Candida dubliniensis CD36]
gi|223644741|emb|CAX40732.1| retrotransposon polyprotein, putative [Candida dubliniensis CD36]
Length = 1350
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 153/393 (38%), Gaps = 79/393 (20%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R + +L+ LNS+V + + ++I + YL T+D+S AY + + R R
Sbjct: 509 GGFRFLIDLRVLNSFVELEAGHPKDVREIIRNISGKKYLTTLDISNAYFQLELDERDRDI 568
Query: 668 LCFLIPMDMSSFR--PSLSSPGVCP-TIKLGRRLRERGVRCLVYLDDFLL----ASQDP- 719
F+ P+ + F+ P V T L + LR +LDD + ASQD
Sbjct: 569 TAFVTPIGVLRFKVMPQGFKNSVSYFTNVLTKILRSVSKFTESFLDDIAILGPDASQDSD 628
Query: 720 -----IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTD---LLQVRLPV 771
I + ++ TL LL G ++N K Q I D+LG + LL+ R+
Sbjct: 629 DDTDMIRHLDDVVATLSLLHEHGLKINAAKLQ-IAMKEADFLGYRVNEQGATLLRKRVSA 687
Query: 772 DKIPPLRDRL-QTQALIELKWFYHNLTG-----FTPLHPPVPRT---------------- 809
+ P+ + L + + + + +Y +L +PLH V T
Sbjct: 688 FEEFPIPNTLTKLERFLGMTNYYRHLIPAYSEIASPLHKLVTATRKEQKKSLTLNEKELK 747
Query: 810 ------------------------FMSTDASDVGWGAMV------GNV----SVQGVWTQ 835
+ TDAS + W ++ GNV V G +
Sbjct: 748 HFEYLKKCLVSEPVVTSLNKEDEVMLFTDASSLSWAGVLESKNTDGNVVVVDCVSGSFNT 807
Query: 836 AQRSWHINLKELFTVRAAISSNPSLVANHTVVLQ--SDNKTVIAYIRKQGGLRSHALLAE 893
Q ++ I KEL + ++ + N+ V++ DNK V+ + G + +
Sbjct: 808 TQGNYTIYEKELAAICFSLEKLEMHLLNYDKVIKIYCDNKAVVTLL--NGSFTNGHSMNR 865
Query: 894 TKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
K L + NI I I GK N +AD LSR
Sbjct: 866 VAKWLSFLRNYNIEIA--HIDGKSNIVADCLSR 896
>gi|270016119|gb|EFA12567.1| hypothetical protein TcasGA2_TC004196 [Tribolium castaneum]
Length = 1635
Score = 54.3 bits (129), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y++TIDL +Y IP++ R++ FLY G Y L FGL +A +F++ + VL
Sbjct: 867 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMD--VVLG 924
Query: 411 RERGVRCLVYLDDFLLASQ---DSVVLKNQIFQTL 442
E + Y+DD L+AS+ + + Q+F+ L
Sbjct: 925 TEVREFVVNYIDDLLVASETLNEHLEHLRQVFEKL 959
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + +NS + ++ Y++TIDL +Y IP++ R+
Sbjct: 829 DGTVRICLDARMINSKMIADCESPPAADELLRRFHGIRYMSTIDLRSSYWQIPLSPESRQ 888
Query: 667 FLCFLIPMDMSSF-------RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDP 719
+ FL ++ + ++ S + LG +RE V Y+DD L+AS+
Sbjct: 889 YTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVREFVVN---YIDDLLVASETL 945
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ Q + L +NL+KS I V +LG
Sbjct: 946 NEHLEHLRQVFEKLKQARMTINLEKSNFI-QKEVKFLG 982
>gi|440792212|gb|ELR13440.1| hypothetical protein ACA1_244900 [Acanthamoeba castellanii str.
Neff]
Length = 235
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 350 DYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVL 409
D+L T+D ++ H+ + RH+ L F ++GT Y F L ++P F +
Sbjct: 155 DFLITLDFQDSFHHVEVHPRHQHLLAFHWRGTHYTFQACPFSLNTSPWIFTR-------A 207
Query: 410 LRERGVRCLVYLDDFLLASQDSV 432
L RG++C+VY+D+ ++ + D
Sbjct: 208 LAVRGIQCMVYMDNMIIMAPDKA 230
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 644 DYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGV 703
D+L T+D ++ H+ + RH+ L F +F+ S P I R L RG+
Sbjct: 155 DFLITLDFQDSFHHVEVHPRHQHLLAFHWRGTHYTFQACPFSLNTSPWI-FTRALAVRGI 213
Query: 704 RCLVYLDDFLLASQD 718
+C+VY+D+ ++ + D
Sbjct: 214 QCMVYMDNMIIMAPD 228
>gi|270016329|gb|EFA12775.1| hypothetical protein TcasGA2_TC005018 [Tribolium castaneum]
Length = 997
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-AVL 409
Y++TIDL +Y IP++ R++ FLY G Y L FGL +A +F++ + V
Sbjct: 415 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTE 474
Query: 410 LRERGVRCLVYLDDFLLASQ 429
+RE V Y+DD L+AS+
Sbjct: 475 VREFVVN---YIDDLLVASE 491
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + +NS + ++ Y++TIDL +Y IP++ R+
Sbjct: 377 DGTVRICLDARMINSKMIADCESPPAADELLRRFHGIRYMSTIDLRSSYWQIPLSPESRQ 436
Query: 667 FLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLAS 716
+ FL +P + + S S + LG +RE V Y+DD L+AS
Sbjct: 437 YTAFLYNGRSYTYQVLPFGLKTAVGSFSR---AMDVVLGTEVREFVVN---YIDDLLVAS 490
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ + Q + L ++NL+KS I V +LG
Sbjct: 491 ETLNEHLEHLRQVFEKLKQARMKINLEKSNFI-QKEVKFLG 530
>gi|9626943|ref|NP_056728.1| reverse transcriptase [Cauliflower mosaic virus]
gi|130592|sp|P03554.1|POL_CAMVS RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
gi|58826|emb|CAA23460.1| unnamed protein product [Cauliflower mosaic virus]
Length = 679
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 140/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + + R
Sbjct: 298 GKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPL 357
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 358 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 416
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 417 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 476
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 477 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPP 536
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A++++H N KE
Sbjct: 537 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKE 596
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 597 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 654
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 655 DV--EHIKGTDNHFADFLSRE 673
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+++
Sbjct: 530 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKN 589
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 590 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 647
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 648 WLSHYSFDV--EHIKGTDNHFADFLSRE 673
>gi|385399431|gb|AFI61742.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 679
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 140/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + + R
Sbjct: 298 GKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPL 357
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 358 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 416
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 417 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 476
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 477 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPP 536
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A++++H N KE
Sbjct: 537 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKE 596
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 597 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 654
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 655 DV--EHIKGTDNHFADFLSRE 673
Score = 46.6 bits (109), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+++
Sbjct: 530 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKN 589
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 590 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 647
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 648 WLSHYSFDV--EHIKGTDNHFADFLSRE 673
>gi|91176525|gb|ABE26652.1| pol polyprotein [Nosema bombycis]
Length = 487
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N I N LN V K+ L +++ L++ Y + IDL + +P+A R
Sbjct: 139 NNTYRITVNFVKLNKLVELDKYSLPKIEEMIYNLKEMSYFSKIDLKDGFFQVPLAEEDRF 198
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F +K +Y+ + G ++P F ++ + L E G C VY+DD L+
Sbjct: 199 KTAFRFKHQLYEWNVMPMGFKNSPAIFQRVMD--NALREEIGKCCFVYVDDILV 250
>gi|327272201|ref|XP_003220874.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Anolis carolinensis]
Length = 738
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 133/341 (39%), Gaps = 32/341 (9%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G +R V + + LN Y ++ L ++ +Q +DL AY I I
Sbjct: 68 GELRLVCDYRILNKYTIQDRYPLPLISELLSRVQGAKVFTKLDLRGAYNLIRIREGDEWK 127
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLV------YLDDFLLASQDPIV 721
F FR + G+C + +R R L+ YLDD L+ S+D
Sbjct: 128 TAFNTCFGCHEFR--VMPFGLCNAPAVFQRFMNDVFRDLIDQFLVIYLDDILIFSKDEKE 185
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG-ISWDTDLLQVRLPVDKIPPLRDR 780
+ + Q L L G K + V++LG + +L VD + ++
Sbjct: 186 HRQHVKQVLHRLRANGLFAKASKC-VFHVPEVEFLGHVVSGRELKMDPHKVDAVNSWQEL 244
Query: 781 LQTQALIELKWFYHNLTGFTP-LHPPVPRTFM-STDASDVGWGAMVGNVSVQGVW----- 833
+ + F + F P HP V + F+ DAS GA++ G
Sbjct: 245 KTKKDVQRFLGFANYYREFIPNFHPDVDKPFVVEADASSYALGAVLSQKDSSGTLRPCGF 304
Query: 834 -----TQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLR 886
T ++++ I KEL ++ A + A H +V++SD+K + +++ L
Sbjct: 305 YSRQLTPFEQNYTIWEKELLAIKVAFEVWRHWLEGARHQIVVRSDHKN-LEHLQTAKKLN 363
Query: 887 SHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
+ + L S+ N + F+ GK N ADALSR+
Sbjct: 364 QRQI-----RWALFFSRFNFKV--QFVEGKANLRADALSRK 397
>gi|189242365|ref|XP_001809905.1| PREDICTED: similar to protease, reverse transcriptase and RNase H
[Tribolium castaneum]
Length = 1394
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y++TIDL +Y IP++ R++ FLY G Y L FGL +A +F++ + VL
Sbjct: 626 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMD--VVLG 683
Query: 411 RERGVRCLVYLDDFLLASQ---DSVVLKNQIFQTL 442
E + Y+DD L+AS+ + + Q+F+ L
Sbjct: 684 TEVREFVVNYIDDLLVASETLNEHLEHLRQVFEKL 718
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + +NS + ++ Y++TIDL +Y IP++ R+
Sbjct: 588 DGTVRICLDARMINSKMIADCESPPAADELLRRFHGIRYMSTIDLRSSYWQIPLSPESRQ 647
Query: 667 FLCFLIPMDMSSF-------RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDP 719
+ FL ++ + ++ S + LG +RE V Y+DD L+AS+
Sbjct: 648 YTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVREFVVN---YIDDLLVASETL 704
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ Q + L +NL+KS I V +LG
Sbjct: 705 NEHLEHLRQVFEKLKQARMTINLEKSNFI-QKEVKFLG 741
>gi|840738|emb|CAA55974.1| unnamed protein product [Cauliflower mosaic virus]
Length = 680
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 140/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + + R
Sbjct: 299 GKKRMVVNYKAMNKATIGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPL 358
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 359 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 417
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 418 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 477
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 478 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWRWTKEDTLYMQKVKKNLQGFPP 537
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A++++H N KE
Sbjct: 538 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKE 597
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 598 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 655
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 656 DV--EHIKGTDNHFADFLSRE 674
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+++
Sbjct: 531 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKN 590
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 591 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 648
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 649 WLSHYSFDV--EHIKGTDNHFADFLSRE 674
>gi|292619409|ref|XP_001334195.3| PREDICTED: hypothetical protein LOC794259 [Danio rerio]
Length = 2571
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 28/274 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LNS + + L + +L TIDLS+ Y IP+ + R
Sbjct: 1575 DGSIRFCIDFRYLNSVTKFDAYPTPRISDLTDRLGTSKFLTTIDLSKGYWQIPLTPQSRE 1634
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVL 722
F P + F+ + + G+ +RL ++ +R L YLDD ++ S
Sbjct: 1635 LTAFKTPWGLFHFK--VLAFGLHGAPASFQRLMDQVLRGLPFTAAYLDDIVVYSDTWQQH 1692
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQ 782
+ + LQ L G VN +K I + +YLG +L R V+K+ + + Q
Sbjct: 1693 LQHLQEVLQRLQAAGLTVNPQKCTIAKAE-TEYLGFVIGKGVL--RPQVEKVRAIEECPQ 1749
Query: 783 TQALIELKWFYHNLTGFTPLHPPVP----RTFMSTDASDVGWGAMVGNVSV-QGVWTQAQ 837
Q EL+ F + GF H +P R + TD MVG+ S Q WTQ
Sbjct: 1750 PQTRKELRSFL-GMAGF--YHRFIPNFSGRAAVLTD--------MVGSRSPNQLKWTQET 1798
Query: 838 RSWHINLKELFTVRAAISSNPSLVANHTVVLQSD 871
+ +L++ + + ++ NP + VLQ+D
Sbjct: 1799 VAAFQDLRKALS-KDSVLHNPDF--HQPFVLQTD 1829
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + +L TIDLS+ Y IP+ + R F ++ L+FGL AP +F +L +
Sbjct: 1608 LGTSKFLTTIDLSKGYWQIPLTPQSRELTAFKTPWGLFHFKVLAFGLHGAPASFQRLMDQ 1667
Query: 406 VAVLLRERGVR-CLVYLDDFLLAS 428
V RG+ YLDD ++ S
Sbjct: 1668 VL-----RGLPFTAAYLDDIVVYS 1686
>gi|328905463|gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
Length = 810
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 149/378 (39%), Gaps = 66/378 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N+ L Q++ L+ Y ++ D + + + +
Sbjct: 436 GKKRMVVNYKAINAATKGDSHNLPCMQELLTLLRGKIYFSSFDCKNGFWQVLLDEESQLL 495
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLASQDPIVLK 723
F P ++ P+I R ++ RG+ C VY+DD ++ S
Sbjct: 496 TAFTCPDGHYQWKVVPFGLKQAPSI-FQRHMQNALRGLENYCTVYVDDIIVFSDSEEKHY 554
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT-----------------DLLQ 766
+L L+ + G ++ KK+ + + ++++LG D D L+
Sbjct: 555 FHVLSVLKTIEKYGIILSKKKTNLFKT-KINFLGFEIDQGTHCPQKHILENLHKFPDTLE 613
Query: 767 VRLPVDK-----------IP-------PLRDRLQTQALIE--------LKWFYHNLTGFT 800
+ + + IP PL+ +L+ + E +K NLT F
Sbjct: 614 DKKHLQRFLGILTYAESYIPKLAELRRPLQVKLKKDYVWEWKQSDTSYIKKIKKNLTSFP 673
Query: 801 PLHPPVPRTFM--STDASDVGWGAMVGNVSVQ---------GVWTQAQRSWHINLKELFT 849
L+ P + F+ TDAS+ WG ++ + + G + A++++H N KEL
Sbjct: 674 KLYLPKEKEFLIIETDASNDYWGGVLKAKTAEKEEVCRYTSGSFKTAEKNYHSNEKELLA 733
Query: 850 VRAAISSNPSLVANHTVVLQSDNKTVIAYIR-KQGGLRSHALLAETKKLLLIMSKLNIHI 908
V+ AIS + ++++D+K +++ K G L + + S+ I
Sbjct: 734 VKNAISKFSIYLTPVKFLVRTDSKNFTYFLKTKISGDNKQGRLV---RWQMWFSRYTFDI 790
Query: 909 VPYFIPGKCNSLADALSR 926
+ G N LAD L+R
Sbjct: 791 E--HLEGLKNVLADCLTR 806
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 49 NLTGFTPLHPPVPRTFM--STDASDVGWGAMVGNVSVQ---------GVWTQAQRSWHIN 97
NLT F L+ P + F+ TDAS+ WG ++ + + G + A++++H N
Sbjct: 668 NLTSFPKLYLPKEKEFLIIETDASNDYWGGVLKAKTAEKEEVCRYTSGSFKTAEKNYHSN 727
Query: 98 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIR-KQGGLRSHALLAETKKLLLIMS 156
KEL V+ AIS + ++++D+K +++ K G L + + S
Sbjct: 728 EKELLAVKNAISKFSIYLTPVKFLVRTDSKNFTYFLKTKISGDNKQGRLV---RWQMWFS 784
Query: 157 KLNIHIVPYFIPGKCNSLADALSR 180
+ I + G N LAD L+R
Sbjct: 785 RYTFDIE--HLEGLKNVLADCLTR 806
>gi|270016118|gb|EFA12566.1| hypothetical protein TcasGA2_TC004195 [Tribolium castaneum]
Length = 988
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-AVL 409
Y++TIDL +Y IP++ R++ FLY G Y L FGL +A +F++ + V
Sbjct: 321 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTE 380
Query: 410 LRERGVRCLVYLDDFLLASQ 429
+RE V Y+DD L+AS+
Sbjct: 381 VREFVVN---YIDDLLVASE 397
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + +NS + ++ Y++TIDL +Y IP++ R+
Sbjct: 283 DGTVRICLDARMINSKMIADCESPPAADELLRRFHGVRYMSTIDLRSSYWQIPLSPESRQ 342
Query: 667 FLCFL----------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLAS 716
+ FL +P + + S S + LG +RE V Y+DD L+AS
Sbjct: 343 YTAFLYNGRSYTYQVLPFGLKTAVGSFSR---AMDVVLGTEVREFVVN---YIDDLLVAS 396
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ + Q + L +NL+KS I V +LG
Sbjct: 397 ETLNEHLEHLRQVFEKLKQARMTINLEKSNFI-QKEVKFLG 436
>gi|77555076|gb|ABA97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I + + F +
Sbjct: 395 DYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKKENIPKTAFTTRY 454
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
+++ T +SFGL +AP F L N V + ++ V V++DD L+ S+ K + +
Sbjct: 455 GLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--AVFIDDILIYSR----TKEEHEE 508
Query: 441 TLPVNL---------SGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSN 491
L + L SG+C R H L HT V +D+K+ + YI Q L
Sbjct: 509 HLRLALEKLREHQLRSGSCVEVWR-----HYLFGTHTEVY-TDHKS-LKYIFTQPDLN-- 559
Query: 492 ALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQA 531
++ L ++ ++ I ++ PGK N +ADALSR+
Sbjct: 560 ---MRQRRWLELIKDYDMGI--HYHPGKANVVADALSRKG 594
>gi|21450048|ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
Length = 674
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 152/382 (39%), Gaps = 70/382 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K LN L N Q++ L+ + ++ D + + + ++
Sbjct: 291 GKKRMVVNYKKLNEVTIGDSHNLPNMQELITLLRGKNIFSSFDCKSGFWQVLLDDESQKL 350
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLASQDPIVLK 723
F P +R P+I R +++ RG+ LVY+DD ++ S + +
Sbjct: 351 TAFTCPQGHYQWRVVPFGLKQAPSI-FQRHMQDALRGLEEFSLVYVDDIIVFSDNKNDHQ 409
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGIS-----------------------W 760
+ +++ L+ + LG ++ KK+ + ++++LG+
Sbjct: 410 DHVMKVLRRIESLGIILSKKKANLF-KEKINFLGLEIDRGTHTPQNHILDHIHTFPDRIE 468
Query: 761 DTDLLQVRLPV------------DKIPPLRDRLQ-------TQALIE-LKWFYHNLTGFT 800
D LQ L V +K PL+ +L+ TQ+ + +K L F
Sbjct: 469 DKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWTQSDTDYVKKIKKGLINFP 528
Query: 801 PLHPPVPRT--FMSTDASDVGWGAMVGNVSVQ----------GVWTQAQRSWHINLKELF 848
L+ P + TDASD WG ++ + + G + A+ ++H N KEL
Sbjct: 529 KLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGEELICRYSSGTFKPAELNYHSNEKELL 588
Query: 849 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
V+ I+ + +++DN ++ G + + ++K+ LI ++
Sbjct: 589 AVKQVITKFSIYLTPVCFTVRTDNVNLLK------GFMNKKITGDSKQGRLIRWQMWFSH 642
Query: 909 VPY---FIPGKCNSLADALSRQ 927
+ + G+ N LAD L+R+
Sbjct: 643 YTFKVDHLKGEQNVLADYLTRE 664
>gi|302853331|ref|XP_002958181.1| hypothetical protein VOLCADRAFT_99387 [Volvox carteri f.
nagariensis]
gi|300256450|gb|EFJ40715.1| hypothetical protein VOLCADRAFT_99387 [Volvox carteri f.
nagariensis]
Length = 701
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 110/293 (37%), Gaps = 57/293 (19%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ NLK +N K + + + + +N ++ +DL+ A+ HIPI RRF F
Sbjct: 39 VVVNLKRMNIAQKAYKCRYESLRTLRRMGIQNSWMVKVDLADAFYHIPIRAADRRFFVFR 98
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER------------------------ 413
+ G +YQ L G ++P F+++ V R+
Sbjct: 99 FCGVLYQMNALPMGWLNSPYWFSKIMRNVVRFWRDPLAAVGGGRRRLSPPLPPHQFFPSD 158
Query: 414 --------GVRCLVYLDDFL--LASQDSVVLKNQIFQTLPVNLSGNCSRSGRRSHPTHSL 463
G R L YLDDFL AS++ L Q + L +C + + P+ S+
Sbjct: 159 RCARPARLGARVLPYLDDFLFVFASEEQARLGAQWVRESIEFLGLSCHPTKCQWEPSQSV 218
Query: 464 ------VANHTVVLQSDNKTVITYIRKQVGLR----SNALLAETKKLLLIMS-----KLN 508
V + + + R VGLR N L + ++L + KL
Sbjct: 219 YHLGITVNTAEGLFEVPAGKLAKLRRLAVGLRVTAKKNRRLVQKRELAQLCGFAQSVKLA 278
Query: 509 IHIVPYFIPGKCNSLADALSRQ--ALIPDWHLLPSLTESVFPRWGSRVVPLYV 559
+ P F+ + LA + + + DW LL R GS VP Y
Sbjct: 279 LTPXPLFLRNFYDDLAQPVGGXGTSAVIDWALLRGT------RSGSAPVPRYA 325
>gi|391325812|ref|XP_003737421.1| PREDICTED: uncharacterized protein K02A2.6-like, partial
[Metaseiulus occidentalis]
Length = 1209
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 308 IGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIA 367
+ N + + +L+ +N V F L + + + L K + IDL AY IP+
Sbjct: 441 VAEKKNGDVRLCVDLREVNKAVVQDAFPLPHIEDLMQRLAKGRVFSKIDLRSAYHQIPLH 500
Query: 368 RRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
R F+ +++ T + FGLASAP AF L GV C YLDD L+
Sbjct: 501 ESSRDLTAFVSPWGLFRYTRVCFGLASAPAAFQAFME--ETLKDLEGVIC--YLDDVLVV 556
Query: 428 SQDSVVLKNQI 438
+ V ++
Sbjct: 557 GETRQVHDERV 567
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 147/381 (38%), Gaps = 74/381 (19%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G +R +L+ +N V F L + + + L K + IDL AY IP+ R
Sbjct: 446 NGDVRLCVDLREVNKAVVQDAFPLPHIEDLMQRLAKGRVFSKIDLRSAYHQIPLHESSRD 505
Query: 667 FLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRE-RGVRCLVYLDDFLLASQDPIVL 722
F+ P + + L+S + L++ GV C YLDD L+ + V
Sbjct: 506 LTAFVSPWGLFRYTRVCFGLASAPAAFQAFMEETLKDLEGVIC--YLDDVLVVGETRQVH 563
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG--------------------ISWDT 762
++ L+ L+ G +VN K + ++LG +
Sbjct: 564 DERVRGLLRTLSERGLKVNNK--CVFGVEETEFLGHVVSSKGVKPLPDNVKAIENVPEPK 621
Query: 763 DLLQVR------------LP--VDKIPPLRDRLQTQALIELKWFYHNLTGF--------- 799
++ Q+R +P + + PLR+ L+ + ++ W F
Sbjct: 622 NVSQLRSFLGMAGFYLKCVPRYAELVEPLRELLRKE--VKFDWREKQRLAFRAVKGAIAE 679
Query: 800 -TPLH---PPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLK 845
PL P +P ++TDASD G GA++ V G ++ QR + + K
Sbjct: 680 AAPLRVFDPALP-LVLTTDASDYGLGAVLQQ-RVNGKLEPLAYASCSLSETQRRYSTSDK 737
Query: 846 ELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLN 905
E AI + L++D++ +++ +G R LA + L + +
Sbjct: 738 EALACVWAIEKWHVYLWGRRFTLKTDHRALVSLFGTKGADRRSIRLARWAERLGAYA-FD 796
Query: 906 IHIVPYFIPGKCNSLADALSR 926
+ + PG N +ADALSR
Sbjct: 797 VE----YKPGVENVIADALSR 813
>gi|241957361|ref|XP_002421400.1| retrotransposon polyprotein, putative [Candida dubliniensis CD36]
gi|223644744|emb|CAX40735.1| retrotransposon polyprotein, putative [Candida dubliniensis CD36]
Length = 1124
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 151/393 (38%), Gaps = 79/393 (20%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R + +L+ LNS+V + + ++I + YL T+D+S AY + + R R
Sbjct: 283 GGFRFLIDLRVLNSFVELEAGHPKDVREIIRNISGKKYLTTLDISNAYFQLELDERDRDI 342
Query: 668 LCFLIPMDMSSFR---PSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLL----ASQDP- 719
F+ P+ + F+ + T L + LR +LDD + ASQD
Sbjct: 343 TAFVTPIGVLRFKVMPQGFKNSVSYFTNVLTKILRSVSKFTESFLDDIAILGPDASQDSD 402
Query: 720 -----IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTD---LLQVRLPV 771
I + ++ TL LL G ++N K Q I D+LG + LL+ R+
Sbjct: 403 EDTDMIRHLDDVVATLSLLHEHGLKINAAKLQ-IAMKEADFLGYRVNEKGATLLRKRVSA 461
Query: 772 DKIPPLRDRL-QTQALIELKWFYHNLTG-----FTPLHPPVPRT---------------- 809
+ P+ + L + + + + +Y +L +P H V T
Sbjct: 462 FEEFPIPNTLTKLERFLGMTNYYRHLIPAYSEIASPFHKLVTVTRKEQKKSLTLNEKELK 521
Query: 810 ------------------------FMSTDASDVGWGAMV------GNV----SVQGVWTQ 835
+ TDAS + W ++ GNV V G +
Sbjct: 522 HFEYLKKCLVSEPVVTSLNKEDEVMLFTDASSLSWAGVLESKNTDGNVVVVDCVSGFFNT 581
Query: 836 AQRSWHINLKELFTVRAAISSNPSLVANHTVVLQ--SDNKTVIAYIRKQGGLRSHALLAE 893
Q ++ I KEL + ++ + N+ V++ DNK V+ + G + +
Sbjct: 582 TQGNYTIYEKELAAICFSLEKLEIHLLNYDKVIKIYCDNKAVVTLL--NGSFTNGHSMNR 639
Query: 894 TKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
K L + NI I I GK N +AD LSR
Sbjct: 640 VAKWLSFLRNYNIEIA--HIDGKSNIVADCLSR 670
>gi|270017238|gb|EFA13684.1| hypothetical protein TcasGA2_TC016048 [Tribolium castaneum]
Length = 1075
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-AVL 409
Y++TIDL +Y IP++ R++ FLY G Y L FGL +A +F++ + V
Sbjct: 321 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTE 380
Query: 410 LRERGVRCLVYLDDFLLASQ---DSVVLKNQIFQTL 442
+RE V Y+DD L+AS+ + + Q+F+ L
Sbjct: 381 VREFVVN---YIDDLLVASETLNEHLEHLRQVFEKL 413
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + +NS + ++ Y++TIDL +Y IP++ R+
Sbjct: 283 DGTVRICLDARMINSKMIADCESPPAADELLRRFHGIRYMSTIDLRSSYWQIPLSPESRQ 342
Query: 667 FLCFLIPMDMSSF-------RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDP 719
+ FL ++ + ++ S + LG +RE V Y+DD L+AS+
Sbjct: 343 YTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVREFVVN---YIDDLLVASETL 399
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQII 748
+ Q + L +NL+KS I
Sbjct: 400 NEHLEHLRQVFEKLKQARMTINLEKSNFI 428
>gi|2133581|pir||S68306 pol polyprotein, truncated - red flour beetle retrotransposon Woot
gi|805077|gb|AAC47271.1| protease, reverse transcriptase and RNase H [Tribolium castaneum]
Length = 712
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-AVL 409
Y++TIDL +Y IP++ R++ FLY G Y L FGL +A +F++ + V
Sbjct: 390 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTE 449
Query: 410 LRERGVRCLVYLDDFLLASQ 429
+RE V Y+DD L+AS+
Sbjct: 450 VREFVVN---YIDDLLVASE 466
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 11/162 (6%)
Query: 603 GLYGDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIAR 662
G DGT+R + + +NS + ++ + Y++TIDL +Y IP++
Sbjct: 348 GKKKDGTVRICLDARMINSKMIADCESPPAADELLRRFHEIRYMSTIDLRSSYWQIPLSP 407
Query: 663 RHRRFLCFLIPMDMSSF-------RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
R++ FL ++ + ++ S + LG +RE V Y+DD L+A
Sbjct: 408 ESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVREFVVN---YIDDLLVA 464
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
S+ + Q + L +NL+KS I V +LG
Sbjct: 465 SETLNEHLEHLRQVFEKLKQARMTINLEKSNFI-QKEVKFLG 505
>gi|307196222|gb|EFN77869.1| hypothetical protein EAI_03230 [Harpegnathos saltator]
Length = 103
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 126
+DAS GWGA + + G WT+ +S HIN EL A+ + + N ++L+ DN
Sbjct: 3 SDASLTGWGASCADQRIHGWWTKEDQSLHINALELKAAFYALKCFAAHLHNCNILLRIDN 62
Query: 127 KTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFI 167
T ++YI K G ++ L T+++ + +I++ +I
Sbjct: 63 TTALSYINKFGSVQHPVLSDITRQIWQWCEERHIYLFASYI 103
Score = 53.1 bits (126), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 813 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 872
+DAS GWGA + + G WT+ +S HIN EL A+ + + N ++L+ DN
Sbjct: 3 SDASLTGWGASCADQRIHGWWTKEDQSLHINALELKAAFYALKCFAAHLHNCNILLRIDN 62
Query: 873 KTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFI 913
T ++YI K G ++ L T+++ + +I++ +I
Sbjct: 63 TTALSYINKFGSVQHPVLSDITRQIWQWCEERHIYLFASYI 103
>gi|307180652|gb|EFN68577.1| Transposon Ty3-G Gag-Pol polyprotein [Camponotus floridanus]
Length = 152
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT R + NLK L+ +V + FK+ + + + +DY+AT+DL AY +PI + R+
Sbjct: 87 DGTHRLILNLKKLSEFVAAEHFKIEDWKVAKRLIGPHDYMATLDLKDAYYLVPIKKMDRK 146
Query: 667 FLCF 670
FL F
Sbjct: 147 FLRF 150
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ NLK L+ +V + FK+ + + + +DY+AT+DL AY +PI + R+FL F
Sbjct: 92 LILNLKKLSEFVAAEHFKIEDWKVAKRLIGPHDYMATLDLKDAYYLVPIKKMDRKFLRFS 151
Query: 378 Y 378
Y
Sbjct: 152 Y 152
>gi|292615051|ref|XP_002662530.1| PREDICTED: hypothetical protein LOC100333686 [Danio rerio]
Length = 1470
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 23/300 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R
Sbjct: 1067 DGTLRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSRE 1126
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
+ F P+ + F+ G T + + + LR YLDD ++ S
Sbjct: 1127 YTAFRTPVGLYHFKTMPFGLHGAPATFQRLMNQVLRNCEEYSAAYLDDVVIYSTTWTDHV 1186
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQT 783
+ + + LQ + G +N+ K + YLG ++R VDK+ LR+ +
Sbjct: 1187 HHLHKILQKIQKAGLTLNVAKCEWA-RQETRYLGFQLGNG--EIRPQVDKVEALRNCPRP 1243
Query: 784 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV-----WTQAQR 838
+ E++ F L G+ R F+ + A + N++ + + WT+
Sbjct: 1244 RTKKEVRSFL-GLVGWY-------RRFIPQFSEK---AAPLTNLTAKAIKNPVPWTEECE 1292
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
I LKE + S P V + + + + A + ++ + H +L ++KLL
Sbjct: 1293 KAFITLKERMCTVPVLRS-PDFTKKFLVQVDASARGIGAVLMQEDEGQEHPILYLSRKLL 1351
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R +
Sbjct: 1070 LRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSREYTA 1129
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +Y + FGL AP F +L N V LR YLDD ++ S
Sbjct: 1130 FRTPVGLYHFKTMPFGLHGAPATFQRLMNQV---LRNCEEYSAAYLDDVVIYS 1179
>gi|391325818|ref|XP_003737424.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 1192
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 308 IGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIA 367
+ N + + +L+ +N V F L + + + L K + IDL AY IP+
Sbjct: 479 VAEKKNGDVRLCVDLREVNKAVVQDAFPLPHIEDLMQRLAKGRVFSKIDLRSAYHQIPLH 538
Query: 368 RRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
R F+ +++ T + FGLASAP AF L GV C YLDD L+
Sbjct: 539 ESSRDLTAFVSPWGLFRYTRVCFGLASAPAAFQAFME--ETLKDLEGVIC--YLDDVLVV 594
Query: 428 SQDSVVLKNQI 438
+ V ++
Sbjct: 595 GETRQVHDERV 605
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 147/381 (38%), Gaps = 74/381 (19%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G +R +L+ +N V F L + + + L K + IDL AY IP+ R
Sbjct: 484 NGDVRLCVDLREVNKAVVQDAFPLPHIEDLMQRLAKGRVFSKIDLRSAYHQIPLHESSRD 543
Query: 667 FLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRE-RGVRCLVYLDDFLLASQDPIVL 722
F+ P + + L+S + L++ GV C YLDD L+ + V
Sbjct: 544 LTAFVSPWGLFRYTRVCFGLASAPAAFQAFMEETLKDLEGVIC--YLDDVLVVGETRQVH 601
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG--------------------ISWDT 762
++ L+ L+ G +VN K + ++LG +
Sbjct: 602 DERVRGLLRTLSERGLKVNNK--CVFGVEETEFLGHVVSSKGVKPLPDNVKAIENVPEPK 659
Query: 763 DLLQVR------------LP--VDKIPPLRDRLQTQALIELKWFYHNLTGF--------- 799
++ Q+R +P + + PL++ L+ + ++ W F
Sbjct: 660 NVSQLRSFLGMAGFYLKCVPRYAELVEPLKELLRKE--VKFDWRERQRLAFRAVKGAIAE 717
Query: 800 -TPLH---PPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLK 845
PL P +P ++TDASD G GA++ V G ++ QR + + K
Sbjct: 718 AAPLRVFDPALP-LVLTTDASDYGLGAVLQQ-RVNGKLEPLAYASCSLSETQRRYSTSDK 775
Query: 846 ELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLN 905
E AI + L++D++ +++ +G R LA + L + +
Sbjct: 776 EALACVWAIEKWHVYLWGRRFTLKTDHRALVSLFGTKGADRRSIRLARWAERLGAYA-FD 834
Query: 906 IHIVPYFIPGKCNSLADALSR 926
+ + PG N +ADALSR
Sbjct: 835 VE----YKPGVENVIADALSR 851
>gi|340383235|ref|XP_003390123.1| PREDICTED: hypothetical protein LOC100636300 [Amphimedon
queenslandica]
Length = 857
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
+ ++ D+ +AY +IPI L + GTV+ L FGL SAP+ F+ +++
Sbjct: 505 RGAFIVKADIKEAYRNIPIHPDDYGLLGVQWNGTVFVDKFLPFGLRSAPKIFSAVADAAQ 564
Query: 408 VLLRERGVR-CLVYLDDFLLASQD-SVVLKNQI 438
+L E GVR L YLDDF L ++ + L+++I
Sbjct: 565 WVLTENGVRQVLHYLDDFALVERNQATALESKI 597
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 106/269 (39%), Gaps = 43/269 (15%)
Query: 698 LRERGVR-CLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYL 756
L E GVR L YLDDF L ++ + + LG + K + P+ + +L
Sbjct: 567 LTENGVRQVLHYLDDFALVERNQATALESKITLCSVFGSLGLPLEPSKLEG-PTTCLTFL 625
Query: 757 GISWDTDLLQVRLPVDKIPPLRDRL---QTQALIELKWFYHNLTGFTPLHPPV---PRTF 810
GI DT LQ+RLP DK+ L + L Q + +I K +LTG V R F
Sbjct: 626 GIEVDTVSLQLRLPTDKLDRLLNELKEVQGRKVIS-KRELQSLTGLLQHACKVVRPGRAF 684
Query: 811 MS--------------------TDASDVGWGAMV----GNVSV--QGVWTQAQRSWHINL 844
+ +DV W + VS+ ++A W ++L
Sbjct: 685 LQRLYALEKVGSAPDHHIRLNVAARADVMWWQLFVSHWNGVSMLCDPKHSKADIQWPLDL 744
Query: 845 -------KELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL 897
KEL V A + +V DN+ V+ + SH L+ + L
Sbjct: 745 EPTSIQVKELIPVVIAAALFGRSWRGKLIVFSVDNQAVVHILNNTHSKESH-LMHLIRLL 803
Query: 898 LLIMSKLNIHIVPYFIPGKCNSLADALSR 926
S + IPG+CN+LADALSR
Sbjct: 804 AFYASYYDFWFRAEHIPGRCNTLADALSR 832
>gi|326672972|ref|XP_003199768.1| PREDICTED: hypothetical protein LOC100331420 [Danio rerio]
Length = 1442
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 125/300 (41%), Gaps = 23/300 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R
Sbjct: 1039 DGTLRVCLDFRKLNALSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSRE 1098
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
+ F P+ + F+ G T + + + LR YLDD ++ S
Sbjct: 1099 YTAFRTPVGLYHFKTMPFGLHGAPATFQRLMNQVLRNCEEYSAAYLDDVVIYSTTWTDHV 1158
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQT 783
+ + + LQ + G +N+ K + YLG + + ++R VDK+ LR+ +
Sbjct: 1159 HHLHKILQKIQRAGLTLNVAKCEWA-RQETRYLG--FQLGIGEIRPQVDKLEALRNCPRP 1215
Query: 784 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV-----WTQAQR 838
+ E++ F L G+ R F+ + A + N++ + + WT+
Sbjct: 1216 RTKKEVRSFL-GLVGWY-------RRFIPQFSEK---AAPLTNLTAKAIKNPVPWTEECE 1264
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
I LKE + S P V + + + + A + ++ + H +L ++KLL
Sbjct: 1265 KAFITLKERMCTVPVLRS-PDFTKKFLVQVDASARGIGAVLMQEDEGQEHPILYLSRKLL 1323
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R +
Sbjct: 1042 LRVCLDFRKLNALSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSREYTA 1101
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +Y + FGL AP F +L N V LR YLDD ++ S
Sbjct: 1102 FRTPVGLYHFKTMPFGLHGAPATFQRLMNQV---LRNCEEYSAAYLDDVVIYS 1151
>gi|313215817|emb|CBY16360.1| unnamed protein product [Oikopleura dioica]
Length = 813
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
FL+K L ID + H+ + R C Y G ++ FG+ AP A+ +++
Sbjct: 282 FLKKGMLLTKIDDKSGFYHMKLDNFSRNMACCEYGGQTFRYKGAVFGIPKAPGAYQTMNS 341
Query: 405 WVAVLLRERGVRCLVYLDDFLL 426
LLR+ G C +YLDD L
Sbjct: 342 VPMCLLRQNGFHCFLYLDDRLF 363
Score = 43.1 bits (100), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 639 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL----SSPGVCPTIKL 694
FL+K L ID + H+ + R C ++ ++ +PG T+
Sbjct: 282 FLKKGMLLTKIDDKSGFYHMKLDNFSRNMACCEYGGQTFRYKGAVFGIPKAPGAYQTMNS 341
Query: 695 GRR--LRERGVRCLVYLDDFLL-------ASQDPIVLKNQI----LQTLQLLTYLGWQVN 741
LR+ G C +YLDD L A + ++ +++ L +T G +N
Sbjct: 342 VPMCLLRQNGFHCFLYLDDRLFLTMPESKAEEQALIRGDRVPLAPFLGLLSITANGTYIN 401
Query: 742 LKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQA 785
KS + P+ ++++LG +T +R+P +K +R + +A
Sbjct: 402 RPKSVLKPTQKMEFLGFGLNTIKGTIRIPTEKF----ERFKIEA 441
>gi|301609602|ref|XP_002934358.1| PREDICTED: hypothetical protein LOC100487718 [Xenopus (Silurana)
tropicalis]
Length = 913
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 30/245 (12%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLT-YLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ 766
YLDDFL +L +LQ Q + G + K++ P+ + +LGI DT +
Sbjct: 665 YLDDFLCVGPGHSMLCAVLLQMFQRVADSFGVPLAPDKTEG-PTTCLRFLGIEIDTIRQE 723
Query: 767 VRLPVDKIPPLRDRL------------QTQALIELKWFYHNLTGFTPL------HPPVPR 808
RLP DKI L++ + Q Q+L+ F + L P P
Sbjct: 724 CRLPQDKIQQLKEEVGYAREAKKITLRQLQSLLGKLNFACRIIPMRSLMADYWQSQPRPN 783
Query: 809 TFMS--TDAS-DVGWGAMVGN----VSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLV 861
+ TDA+ G+GA S W + + + ++ L E F + AI + +
Sbjct: 784 RELHLFTDAAGSAGFGAYFAGKWCAASWPNTWVENKLTGNLTLLEFFPIIVAIELWGTQL 843
Query: 862 ANHTVVLQSDNKTVIAYIRK-QGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 920
N +VV +DN +V+ I G S +L K L+L +LN+ +PG N +
Sbjct: 844 KNQSVVFFTDNMSVVMAITNLTSG--SRPVLNLLKHLVLRCLQLNVRFEAKHVPGHTNEI 901
Query: 921 ADALS 925
AD+LS
Sbjct: 902 ADSLS 906
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 67 TDAS-DVGWGAMVGN----VSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 121
TDA+ G+GA S W + + + ++ L E F + AI + + N +VV
Sbjct: 790 TDAAGSAGFGAYFAGKWCAASWPNTWVENKLTGNLTLLEFFPIIVAIELWGTQLKNQSVV 849
Query: 122 LQSDNKTVIAYIRK-QGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 179
+DN +V+ I G S +L K L+L +LN+ +PG N +AD+LS
Sbjct: 850 FFTDNMSVVMAITNLTSG--SRPVLNLLKHLVLRCLQLNVRFEAKHVPGHTNEIADSLS 906
>gi|125803524|ref|XP_001343088.1| PREDICTED: hypothetical protein LOC100003575 [Danio rerio]
Length = 1496
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 23/300 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R
Sbjct: 1093 DGTLRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSRE 1152
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
+ F P+ + F+ G T + + + LR YLDD ++ S
Sbjct: 1153 YTAFRTPVGLYHFKTMPFGLHGAPATFQRLMNQVLRNCEEYSAAYLDDVVIYSTTWTDHV 1212
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQT 783
+ + + LQ + G +N+ K + YLG ++R VDK+ LR+ +
Sbjct: 1213 HHLHKILQKIQRAGLTLNVAKCEWA-RQETRYLGFQLGNG--EIRPQVDKVEALRNCPRP 1269
Query: 784 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV-----WTQAQR 838
+ E++ F L G+ R F+ + A + N++ + + WT+
Sbjct: 1270 RTKKEVRSFL-GLVGWY-------RRFIPQFSEK---AAPLTNLTAKAIKNPVPWTEECE 1318
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
I LKE + S P V + + + + A + ++ + H +L ++KLL
Sbjct: 1319 KAFITLKERMCTVPVLRS-PDFTKKFLVQVDASARGIGAVLMQEDEGQKHPILYLSRKLL 1377
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R +
Sbjct: 1096 LRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSREYTA 1155
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +Y + FGL AP F +L N V LR YLDD ++ S
Sbjct: 1156 FRTPVGLYHFKTMPFGLHGAPATFQRLMNQV---LRNCEEYSAAYLDDVVIYS 1205
>gi|270006313|gb|EFA02761.1| hypothetical protein TcasGA2_TC008494 [Tribolium castaneum]
Length = 1453
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y ++DL Y IP++ +++ F+ Y+ + FGL +AP+ F + N
Sbjct: 664 LQGGVYFTSLDLRSGYHQIPLSEESKKYTSFVTPFGQYEYNRVPFGLTNAPRTFQRFMNK 723
Query: 406 VAVLLRERGVRCLVYLDDFLLASQD-SVVLKN--QIFQTL 442
+ RE VYLDD LL ++D + L+N ++F+ L
Sbjct: 724 ILKPARENAA---VYLDDVLLHAKDVNEALQNLQKVFEIL 760
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G R + + LN+ L LQ Y ++DL Y IP++ ++
Sbjct: 631 NGEQRLCIDYRKLNAQTVKDNHPLPRVDDQIDRLQGGVYFTSLDLRSGYHQIPLSEESKK 690
Query: 667 FLCFLIPMDMSSF-RPSLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
+ F+ P + R T + + + L+ VYLDD LL ++D
Sbjct: 691 YTSFVTPFGQYEYNRVPFGLTNAPRTFQRFMNKILKPARENAAVYLDDVLLHAKDV---- 746
Query: 724 NQILQTLQ----LLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD 779
N+ LQ LQ +L G +NLKK + + V +LG +D + +++ DK +
Sbjct: 747 NEALQNLQKVFEILRSEGLTLNLKKCSFLMTS-VTFLG--FDIEDGKIKPGQDKTKAIEA 803
Query: 780 RLQTQALIELKWFYHNLTGF 799
+++ +++ F LTG+
Sbjct: 804 YTAPKSVHQIRQFI-GLTGY 822
>gi|410730499|ref|XP_003980070.1| hypothetical protein NDAI_0G04090 [Naumovozyma dairenensis CBS 421]
gi|401780247|emb|CCK73394.1| hypothetical protein NDAI_0G04090 [Naumovozyma dairenensis CBS 421]
Length = 1430
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+ +DL Y +PIA R F+ + YQ + FGL +AP F +L N + LR
Sbjct: 579 FSKLDLVSGYHQVPIAEGDRYKTAFITQRGQYQWNVMPFGLTNAPATFQRLMNHI---LR 635
Query: 412 ER-GVRCLVYLDDFLLASQ 429
E G C+VYLDD L+ S+
Sbjct: 636 EYIGKFCIVYLDDILIYSK 654
>gi|189236881|ref|XP_001807130.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 2021
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y ++DL Y IP++ +++ F+ Y+ + FGL +AP+ F + N
Sbjct: 1232 LQGGVYFTSLDLRSGYHQIPLSEESKKYTSFVTPFGQYEYNRVPFGLTNAPRTFQRFMNK 1291
Query: 406 VAVLLRERGVRCLVYLDDFLLASQD-SVVLKN--QIFQTL 442
+ RE VYLDD LL ++D + L+N ++F+ L
Sbjct: 1292 ILKPARENAA---VYLDDVLLHAKDVNEALQNLQKVFEIL 1328
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G R + + LN+ L LQ Y ++DL Y IP++ ++
Sbjct: 1199 NGEQRLCIDYRKLNAQTVKDNHPLPRVDDQIDRLQGGVYFTSLDLRSGYHQIPLSEESKK 1258
Query: 667 FLCFLIPMDMSSF-RPSLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
+ F+ P + R T + + + L+ VYLDD LL ++D
Sbjct: 1259 YTSFVTPFGQYEYNRVPFGLTNAPRTFQRFMNKILKPARENAAVYLDDVLLHAKDV---- 1314
Query: 724 NQILQTLQ----LLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD 779
N+ LQ LQ +L G +NLKK + + V +LG +D + +++ DK +
Sbjct: 1315 NEALQNLQKVFEILRSEGLTLNLKKCSFLMTS-VTFLG--FDIEDGKIKPGQDKTKAIEA 1371
Query: 780 RLQTQALIELKWFYHNLTGF 799
+++ +++ F LTG+
Sbjct: 1372 YTAPKSVHQIRQFI-GLTGY 1390
>gi|326677758|ref|XP_003200905.1| PREDICTED: hypothetical protein LOC100331485 [Danio rerio]
Length = 1474
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 23/300 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R
Sbjct: 1093 DGTLRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSRE 1152
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
+ F P+ + F+ G T + + + LR YLDD ++ S
Sbjct: 1153 YTAFRTPVGLYHFKTMPFGLHGAPATFQRLMNQVLRNCEEYSAAYLDDVVIYSTTWTDHV 1212
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQT 783
+ + + LQ + G +N+ K + YLG ++R VDK+ LR+ +
Sbjct: 1213 HHLHKILQKIQKAGLTLNVAKCEWA-RQETRYLGFQLGNG--EIRPQVDKVEALRNCPRP 1269
Query: 784 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV-----WTQAQR 838
+ E++ F L G+ R F+ + A + N++ + + WT+
Sbjct: 1270 RTKKEVRSFL-GLVGWY-------RRFIPQFSEK---AAPLTNLTAKAIKNPVPWTKECE 1318
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
I LKE + S P V + + + + A + ++ + H +L ++KLL
Sbjct: 1319 KAFITLKERMCTVPVLRS-PDFTKKFLVQVDASARGIGAVLMQEDEGQEHPILYLSRKLL 1377
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R +
Sbjct: 1096 LRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSREYTA 1155
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +Y + FGL AP F +L N V LR YLDD ++ S
Sbjct: 1156 FRTPVGLYHFKTMPFGLHGAPATFQRLMNQV---LRNCEEYSAAYLDDVVIYS 1205
>gi|339254664|ref|XP_003372555.1| putative integrase core domain protein [Trichinella spiralis]
gi|316966995|gb|EFV51499.1| putative integrase core domain protein [Trichinella spiralis]
Length = 1271
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 152/400 (38%), Gaps = 106/400 (26%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
RP + ++LN T ++ L + L + +DL+ AY HIP+
Sbjct: 480 RPCGDYRALNRCTTPDRYPLPHLADFAHNLHGKHIFSKLDLAHAYYHIPMR--------- 530
Query: 671 LIPMDMSSFRPSLSSP-GVCPTIKLGRRLRE-------------RGVR-CLVYLDDFLLA 715
P D++ + ++++P G+ +K+ LR RG+ C VY+DD LLA
Sbjct: 531 --PQDIA--KTAITTPFGLFEFLKMPFGLRNAAQSFQRFIDTVTRGIEDCFVYVDDILLA 586
Query: 716 S---QDPIVLKNQILQTLQLLTYLGWQVNLKKSQI-IPS-----HRVDYLGISWDTDLLQ 766
S ++ VL ++LQ L+ G QVN K + +PS H VD GI D +Q
Sbjct: 587 SASEKEHFVLLKKVLQRLKA---HGIQVNKDKCILAVPSLPFLGHTVDANGIRPLPDKVQ 643
Query: 767 VRLPVDKIPPLRDRLQTQALIELKWFY-----HNLTGFTPL------------------- 802
V P + + + + + FY H T PL
Sbjct: 644 A---VKAFPAPKTGRELRRFLGMVNFYRRFLPHIATTLAPLDAIASAAASTKITLTNDQL 700
Query: 803 -----------------HP-PVPRTFMSTDASDVGWGAMVGNVSVQGVW----------T 834
HP P + DASD GA++ + W T
Sbjct: 701 QAFNAAKDALANATMLHHPHPTEEYALMVDASDHAIGAVLQQ-PAENSWRPLAFFSKRLT 759
Query: 835 QAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVI-AYIRKQGGLRSHALLAE 893
Q+ + +EL A +V +V+ +D+K + A++R L E
Sbjct: 760 ATQKRYSAFGRELLAAYLAAKHFRHVVEGRRLVIYTDHKPLAHAFLRPSNNLNDR----E 815
Query: 894 TKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR--QALIP 931
T+ L LI S + I G N +ADALSR AL P
Sbjct: 816 TRHLDLITSLADD---VRHIGGDSNVVADALSRSVNALFP 852
Score = 47.0 bits (110), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN T ++ L + L + +DL+ AY HIP+ +
Sbjct: 484 DYRALNRCTTPDRYPLPHLADFAHNLHGKHIFSKLDLAHAYYHIPMRPQDIAKTAITTPF 543
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFLLAS---QDSVVLKN 436
+++ + FGL +A Q+F + + V RG+ C VY+DD LLAS ++ VL
Sbjct: 544 GLFEFLKMPFGLRNAAQSFQRFIDTVT-----RGIEDCFVYVDDILLASASEKEHFVLLK 598
Query: 437 QIFQTL 442
++ Q L
Sbjct: 599 KVLQRL 604
>gi|5002171|gb|AAD37341.1|AF140604_5 reverse transcriptase [Cauliflower mosaic virus]
Length = 674
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 139/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + L N ++ ++ ++ D + + + R
Sbjct: 293 GKKRMVVNYKAMNKATVGDAYNLPNKDELLTLIRGKKIFSSFDCKSGFWQVLPDQESRPL 352
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 353 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNTEEDHL 411
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 412 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 471
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 472 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPP 531
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A++++H N KE
Sbjct: 532 LHRPLPEEKLIIETDASDDYWGGMLKAIQINEGTNTELICRYASGSFKAAEKNYHSNDKE 591
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 592 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 649
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 650 DV--EHIKGTDNRFADFLSRE 668
Score = 46.6 bits (109), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+++
Sbjct: 525 NLQGFPPLHRPLPEEKLIIETDASDDYWGGMLKAIQINEGTNTELICRYASGSFKAAEKN 584
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 585 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 642
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 643 WLSHYSFDV--EHIKGTDNRFADFLSRE 668
>gi|327267829|ref|XP_003218701.1| PREDICTED: hypothetical protein LOC100555788 [Anolis carolinensis]
Length = 972
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 133/344 (38%), Gaps = 38/344 (11%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G +R V + + LN Y ++ L ++ +Q +DL AY I I
Sbjct: 363 GELRLVCDYRILNKYTIRDRYPLPLISELLSRVQGAKVFTKLDLRGAYNLIRIREGDEWK 422
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLV------YLDDFLLASQDPIV 721
F FR + G+C + +R R L+ YLDD L+ S+D
Sbjct: 423 TAFNTCFGCHEFR--VMPFGLCNAPAVFQRFMNDVFRDLIDQFLVIYLDDILIFSKDEKE 480
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG-ISWDTDLLQVRLPVDKI---PPL 777
+ + Q L L G K + V++LG + +L VD + L
Sbjct: 481 HRQHVKQVLHRLRANGLFAKASKC-VFHVPEVEFLGHVVSGRELKMDPHKVDAVNSWQEL 539
Query: 778 RDRLQTQALIELKWFYHNLTGFTP-LHPPVPRTFM-STDASDVGWGAMVGNVSVQGVW-- 833
+ + Q + +Y F P HP V + F+ DAS GA++ G
Sbjct: 540 KTKKDVQRFLGFANYYRE---FIPNFHPDVDKPFVVEADASSYALGAVLSQKDSSGTLRP 596
Query: 834 --------TQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQG 883
T ++++ I KEL ++ A + A H +V++SD+K + +++
Sbjct: 597 CGFYSRQLTPFEQNYTIWEKELLAIKVAFEVWRHWLEGARHQIVVRSDHKN-LEHLQTAK 655
Query: 884 GLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
L + + L S+ N + F+ GK N ADALS Q
Sbjct: 656 KLNQRQI-----RWALFFSRFNFKV--QFVEGKANLRADALSHQ 692
>gi|189533692|ref|XP_001921559.1| PREDICTED: hypothetical protein LOC566211 [Danio rerio]
Length = 1496
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 23/300 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R
Sbjct: 1093 DGTLRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSRE 1152
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
+ F P+ + F+ G T + + + LR YLDD ++ S
Sbjct: 1153 YTAFRTPVGLYHFKTMPFGLHGAPATFQRLMNQVLRNCEEYSAAYLDDVVIYSTTWTDHV 1212
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQT 783
+ + LQ + G +N+ K + YLG ++R VDK+ LR+ +
Sbjct: 1213 HHLHTILQKIQRAGLTLNVAKCEWA-RQETRYLGFQLGNG--EIRPQVDKVEALRNCPRP 1269
Query: 784 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV-----WTQAQR 838
+ E++ F L G+ R F+ + A + N++ + + WT+
Sbjct: 1270 RTKKEVRSFL-GLVGWY-------RRFIPQFSEK---AAPLTNLTAKAIKNPVPWTEECE 1318
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
I LKE + S P V + + + + A + ++ + H +L ++KLL
Sbjct: 1319 KAFITLKERMCTVPVLRS-PDFTKKFLVQVDASARGIGAVLMQEDEGQEHPILYLSRKLL 1377
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R +
Sbjct: 1096 LRVCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSREYTA 1155
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +Y + FGL AP F +L N V LR YLDD ++ S
Sbjct: 1156 FRTPVGLYHFKTMPFGLHGAPATFQRLMNQV---LRNCEEYSAAYLDDVVIYS 1205
>gi|270014457|gb|EFA10905.1| hypothetical protein TcasGA2_TC001731 [Tribolium castaneum]
Length = 1398
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y +++DL Y IPI+ R + F+ Y+ + FGL +AP+ F + N
Sbjct: 620 LQGAKYFSSLDLKSGYYQIPISENSRHYTSFVTPSGQYEYLRMPFGLTNAPRVFQRFMN- 678
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
LLR VYLDD LL S
Sbjct: 679 --NLLRPVSKIAAVYLDDVLLHS 699
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 136/354 (38%), Gaps = 47/354 (13%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G R + + LNS L + LQ Y +++DL Y IPI+ R
Sbjct: 587 NGEKRLCIDYRKLNSMTVKDSHPLPRISEQIDRLQGAKYFSSLDLKSGYYQIPISENSRH 646
Query: 667 FLCFLIPMDMSSFRPSLSSP-GVCPTIKLGRRLRERGVR-----CLVYLDDFLLASQDPI 720
+ F+ P + L P G+ ++ +R +R VYLDD LL S
Sbjct: 647 YTSFVTPSGQYEY---LRMPFGLTNAPRVFQRFMNNLLRPVSKIAAVYLDDVLLHSNTEG 703
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDR 780
+ + L +L G +N +K + V +LG + +R +DKI +++
Sbjct: 704 QALCDLREVLDVLRAEGLTLNFQKCAFL-KETVHFLGFEVSDGI--IRPGLDKIQAVKNF 760
Query: 781 LQTQALIELKWFYHNLTG----FTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQA 836
+ + +++ F LTG F + + R + V W W
Sbjct: 761 SPPKNVKQIRQFI-GLTGYFRHFVKNYALIARPLTNLTRKGVNWK-----------WDTE 808
Query: 837 QRSWHINLKELFTVRAAIS-SNPSLVAN-HT-----------VVLQSDNKT-VIAYIRKQ 882
+ LKE+ T R +S +P+ V HT + Q+D + IAY +Q
Sbjct: 809 EELAFERLKEILTSRPVLSIYDPTAVTELHTDASSLGVAGILLQYQTDGRLHPIAYYSRQ 868
Query: 883 GGLRS---HALLAETKKLLLIMSKLNIHI--VPYFIPGKCNSLADALSRQALIP 931
H+ ET ++ + K I++ + + I CN L ++ LIP
Sbjct: 869 TNEHERHYHSFELETLAVVESVKKFRIYLLDLEFTIVTDCNELKATSNKSQLIP 922
>gi|189242086|ref|XP_001806924.1| PREDICTED: similar to retrotransposon protein, putative,
unclassified, partial [Tribolium castaneum]
Length = 1259
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 327 SYVTTKKFKLINHQKIPLFLQKND------YLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
Y K + H +PL + D Y ++DLS Y +P++R R F+
Sbjct: 701 DYRALNKKTVKQHYPLPLIDDQLDRLRGQIYFTSVDLSMGYHQVPMSRDARGKTAFITPD 760
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
VY +SFGLA+AP F +L N V LR + YLDD ++ S+
Sbjct: 761 GVYCFKRMSFGLANAPSQFQRLINIVLGNLRYDTA--MAYLDDIIIPSK 807
>gi|313227295|emb|CBY22441.1| unnamed protein product [Oikopleura dioica]
Length = 804
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 629 KLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSL----S 684
KL +KI FL+K +A +D + H+ + R C ++ + +
Sbjct: 266 KLDECRKILPFLKKGMLMAKVDDKSGFHHVQLDPFSRNMACCQYGGIQFRYKAAAFGIPA 325
Query: 685 SPGVCPTIKLG--RRLRERGVRCLVYLDD--FLLA----SQDPIVLKNQILQT-----LQ 731
PGV + LR+ G C +YLDD FL+ S++ + + +++ L
Sbjct: 326 VPGVYQLVNSVPVNVLRKAGHHCFLYLDDRIFLIEPKSKSEEQALRRGELVPEGPYLGLL 385
Query: 732 LLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
L+T G +N KS ++P+ +++YLG DTD +++P +K+ +
Sbjct: 386 LMTAAGTYINRAKSVLLPTSKMEYLGFFLDTDRCTIKIPTEKLEKFK 432
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 335 KLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLAS 394
KL +KI FL+K +A +D + H+ + R C Y G ++ +FG+ +
Sbjct: 266 KLDECRKILPFLKKGMLMAKVDDKSGFHHVQLDPFSRNMACCQYGGIQFRYKAAAFGIPA 325
Query: 395 APQAFAQLSNWVAV-LLRERGVRCLVYLDD 423
P + QL N V V +LR+ G C +YLDD
Sbjct: 326 VPGVY-QLVNSVPVNVLRKAGHHCFLYLDD 354
>gi|427797945|gb|JAA64424.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1193
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L++ Y +++DL Y I + R R F+ +Y+ L FGL SAP F ++ +
Sbjct: 388 LRRAHYFSSLDLKSGYWQIEVDERDREKTAFVTPDGLYEFRVLPFGLCSAPATFQRMMDT 447
Query: 406 VAVLLRERGVRCLVYLDDFLLASQ 429
V L+ + CLVYLDD ++ S+
Sbjct: 448 VLTGLKWQT--CLVYLDDVVVFSE 469
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 18/215 (8%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LN+ + L L++ Y +++DL Y I + R R
Sbjct: 355 DGTLRFCVDYRKLNNVTKKDVYPLPRIDDSLDRLRRAHYFSSLDLKSGYWQIEVDERDRE 414
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE---RGVR---CLVYLDDFLLASQDPI 720
F+ P + FR + G+C +R+ + G++ CLVYLDD ++ S+
Sbjct: 415 KTAFVTPDGLYEFR--VLPFGLCSAPATFQRMMDTVLTGLKWQTCLVYLDDVVVFSETFE 472
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQI------IPSHRVDYLGISWDTDLLQVRLPVDKI 774
+++ L+ + + +K H V G+ D D L V
Sbjct: 473 QHLHRLRSVLEAIRSADLTLKPEKCHFGYEELKFLGHVVSARGVRPDPDKLTA---VATF 529
Query: 775 PPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPR 808
P D+ + + L +Y + GF+ + P+ R
Sbjct: 530 PAPTDKKAVRRFLGLCAYYRRFIEGFSKIAEPLTR 564
>gi|130591|sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
Length = 674
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 139/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + N ++ ++ ++ D + + + + R
Sbjct: 293 GKKRMVVNYKAMNKATVGDAYNPPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPL 352
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 353 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 411
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 412 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 471
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL GF P
Sbjct: 472 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQGFPP 531
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A++++H N KE
Sbjct: 532 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKE 591
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 592 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 649
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 650 DV--EHIKGTDNHFADFLSRE 668
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL GF PLH P+P + + TDASD WG M+ + + G + A+++
Sbjct: 525 NLQGFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKN 584
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 585 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 642
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 643 WLSHYSFDV--EHIKGTDNHFADFLSRE 668
>gi|326484367|gb|EGE08377.1| hypothetical protein TEQG_08797 [Trichophyton equinum CBS 127.97]
Length = 365
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +L I++ AY IPI + R
Sbjct: 182 DGGLRMCVDYRGLNQITIKNRYPLPLISELLDRLLKAKFLGKINIRDAYTRIPIREKDRW 241
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ + FGLA+AP F N + L ++ C+VYLDD L+ S
Sbjct: 242 MTAFRTRYGYFEYCIMPFGLANAPTTFQAYINEIFADLLDQ--FCVVYLDDILIFSD 296
>gi|427798503|gb|JAA64703.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1015
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 16/223 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + ++LN + + LQ Y +T+DL Y IP+ +
Sbjct: 328 DGSVRFCVDYRALNKITRKDVYPMPRIDDALDSLQGAQYFSTLDLRSGYWQIPMDEADKE 387
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE---RGVR---CLVYLDDFLLASQDPI 720
F P + F ++ G+C R+ + RG++ CL YLDD ++ S
Sbjct: 388 KTAFSTPDGLYEF--NVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVVFSSTFA 445
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQI------IPSHRVDYLGISWDTDLLQVRLPVDKI 774
++ + L L G Q+N KK + H V+ GI D D + L +
Sbjct: 446 DHLQRLDEVLTCLANAGLQLNTKKCHFGNTTIKVLGHLVNKDGIQPDPDKISAVLNFPR- 504
Query: 775 PPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASD 817
P R + L +F + F + P+ + ST A D
Sbjct: 505 -PFRTKELRSFLGLASYFRRFIRNFATIAAPLHKLLASTGAFD 546
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y +T+DL Y IP+ + F +Y+ + FGL +AP F ++ +
Sbjct: 361 LQGAQYFSTLDLRSGYWQIPMDEADKEKTAFSTPDGLYEFNVMPFGLCNAPATFERMIDT 420
Query: 406 VAVLLRERGVR---CLVYLDDFLLAS 428
V RG++ CL YLDD ++ S
Sbjct: 421 VL-----RGLKWKTCLCYLDDIVVFS 441
>gi|77554722|gb|ABA97518.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1524
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 52/278 (18%)
Query: 293 RSSNGLLSGNDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYL 352
RS + L+S +G + + + ++LN K+ L + L+
Sbjct: 783 RSRSRLMSSCRKG-TFDQKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAKVF 841
Query: 353 ATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE 412
+ IDL Y + I F + +Y+ T +SFGL +AP F L N V + +
Sbjct: 842 SKIDLRSGYHQLRIREEDIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVFMEFLD 901
Query: 413 RGVRCLVYLDDFLLASQDSVVLKNQIFQTLPVNLSGNCSRSG------------------ 454
+ V +V++DD L+ S+ + + + + SR G
Sbjct: 902 KFV--VVFIDDILIYSKSEEEHEQHLRLMKDFQVYCDASRHGLGCVLMQEGRVVAYASRQ 959
Query: 455 ----RRSHPT----------------HSLVANHTVVLQSDNKTVITYIRKQVGLRSNALL 494
++PT H+L+ NH V +D+K+ + YI Q L L
Sbjct: 960 LRPHEGNYPTHDLELAAVVHALKIWRHNLIGNHCEVY-TDHKS-LKYIFTQPDLN----L 1013
Query: 495 AETKKLLLIMS-KLNIHIVPYFIPGKCNSLADALSRQA 531
++L LI ++IH + PGK N +ADALSR++
Sbjct: 1014 RPRRRLELIKDYDMSIH----YHPGKANVVADALSRKS 1047
>gi|270017019|gb|EFA13465.1| hypothetical protein TcasGA2_TC004276 [Tribolium castaneum]
Length = 1490
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 327 SYVTTKKFKLINHQKIPLFLQKND------YLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
Y K + H +PL + D Y ++DLS Y +P++R R F+
Sbjct: 701 DYRALNKKTVKQHYPLPLIDDQLDRLRGQIYFTSVDLSMGYHQVPMSRDARGKTAFITPD 760
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
VY +SFGLA+AP F +L N V LR + YLDD ++ S+
Sbjct: 761 GVYCFKRMSFGLANAPSQFQRLINIVLGNLRYDTA--MAYLDDIIIPSK 807
>gi|66828729|ref|XP_647718.1| hypothetical protein DDB_G0267314 [Dictyostelium discoideum AX4]
gi|60475863|gb|EAL73794.1| hypothetical protein DDB_G0267314 [Dictyostelium discoideum AX4]
Length = 316
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 359 QAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCL 418
++ H+ + ++R FL+KG+ Y+ +SFGL++AP+ F L V +LR+ V +
Sbjct: 205 ESLLHVLVDPQYRDLFRFLWKGSHYRWKTMSFGLSTAPRIFTMLLRPVLRMLRDIKVSVI 264
Query: 419 VYLDDFLLA 427
YLDD L+
Sbjct: 265 AYLDDLLIV 273
>gi|270006314|gb|EFA02762.1| hypothetical protein TcasGA2_TC008495 [Tribolium castaneum]
Length = 1365
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y ++DL Y IP++ +++ F+ Y+ + FGL +AP+ F + N
Sbjct: 576 LQGGVYFTSLDLRSGYHQIPLSEESKKYTSFVTPFGQYEYNRVPFGLTNAPRTFQRFMNK 635
Query: 406 VAVLLRERGVRCLVYLDDFLLASQD-SVVLKN--QIFQTL 442
+ RE VYLDD L ++D + L+N ++F+ L
Sbjct: 636 ILKPARENAA---VYLDDVFLHAKDVNEALQNLQKVFEIL 672
>gi|391337694|ref|XP_003743200.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 624
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 308 IGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIA 367
+ N + + +L+ +N V F L + + + L K + IDL AY IP+
Sbjct: 487 VAEKKNGDVRLCVDLREVNKAVVQDAFPLPHIEDLMQRLAKGRAFSKIDLRSAYHQIPLH 546
Query: 368 RRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFL-L 426
R F+ +++ T + FGLASAP AF L GV C YLDD L L
Sbjct: 547 ESSRDLTAFVSPWGLFRYTRVCFGLASAPAAFQAFMEETLKDL--EGVIC--YLDDVLAL 602
Query: 427 ASQDSVVLK 435
A + +K
Sbjct: 603 AKRGRFTMK 611
>gi|301624145|ref|XP_002941367.1| PREDICTED: hypothetical protein LOC100491301 [Xenopus (Silurana)
tropicalis]
Length = 784
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 69 ASDVGWGAMVGNVSVQGVWTQAQRSWHI--NLK--ELFTVRAAISSNPSLVANHTVVLQS 124
A+ +G GA W QA R+ + NLK ELF + AI +ANH V+
Sbjct: 639 AASIGMGAYFRGQWCAEKWPQAWRAMDLIRNLKFLELFPILVAIHLWGDHLANHRVIFWC 698
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
DN +V+ I Q S +LA + L+L K NI +PG N LADALSR
Sbjct: 699 DNLSVVHVINHQTS-SSLPVLALLRDLILCCLKQNIWFRAKHVPGVDNCLADALSR 753
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 815 ASDVGWGAMVGNVSVQGVWTQAQRSWHI--NLK--ELFTVRAAISSNPSLVANHTVVLQS 870
A+ +G GA W QA R+ + NLK ELF + AI +ANH V+
Sbjct: 639 AASIGMGAYFRGQWCAEKWPQAWRAMDLIRNLKFLELFPILVAIHLWGDHLANHRVIFWC 698
Query: 871 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
DN +V+ I Q S +LA + L+L K NI +PG N LADALSR
Sbjct: 699 DNLSVVHVINHQTS-SSLPVLALLRDLILCCLKQNIWFRAKHVPGVDNCLADALSR 753
Score = 40.8 bits (94), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
+ANH V+ DN +V+ I Q S +LA + L+L K NI +PG N L
Sbjct: 689 LANHRVIFWCDNLSVVHVINHQTS-SSLPVLALLRDLILCCLKQNIWFRAKHVPGVDNCL 747
Query: 524 ADALSR 529
ADALSR
Sbjct: 748 ADALSR 753
>gi|301608924|ref|XP_002934033.1| PREDICTED: hypothetical protein LOC100492780 [Xenopus (Silurana)
tropicalis]
Length = 699
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 117/275 (42%), Gaps = 42/275 (15%)
Query: 706 LVYLDDFLLASQD----PIV----LKNQILQTLQLLTYL------GWQVNLKKSQIIPSH 751
L YLDDFL ++D P+ L QI L+ L+ L ++ LK+ Q + H
Sbjct: 370 LHYLDDFLFVAEDKTEGPVTVITFLGIQIDDKLEALSRLIDRAVTARKLTLKQVQTLLGH 429
Query: 752 -----RVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQALIELKWF------YHNLTGFT 800
+V +G ++ L + V K P R+ +L + Y+ +T +
Sbjct: 430 MVFACKVMPMGRAFCRRLSMATVGV-KAPHHYIRISKNHREDLMLWQSFLAEYNGMTCWQ 488
Query: 801 PLHPPVPRTFMSTDA-SDVGWGAMVGNVSVQGVWTQAQ--RSW-------HINLKELFTV 850
P + TDA S VG GA QG W + ++W ++ ELF +
Sbjct: 489 AAAVDSPDIELFTDAASSVGLGAFF-----QGEWCAERWPKTWEGSDLLRNLTFLELFPI 543
Query: 851 RAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 910
A ++N V DN++V+ I +Q S +L + L+L +LNI
Sbjct: 544 LVASFLWGESLSNRRVTFWCDNQSVVHVINRQTS-SSPPVLELLRALVLQCLRLNIWFKA 602
Query: 911 YFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQ 945
+PG NS+AD+LSR + W L P+ ++ Q
Sbjct: 603 QHVPGVKNSIADSLSRFQFMEFWRLAPNASQRGHQ 637
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 47 YHNLTGFTPLHPPVPRTFMSTDA-SDVGWGAMVGNVSVQGVWTQAQ--RSW-------HI 96
Y+ +T + P + TDA S VG GA QG W + ++W ++
Sbjct: 481 YNGMTCWQAAAVDSPDIELFTDAASSVGLGAFF-----QGEWCAERWPKTWEGSDLLRNL 535
Query: 97 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMS 156
ELF + A ++N V DN++V+ I +Q S +L + L+L
Sbjct: 536 TFLELFPILVASFLWGESLSNRRVTFWCDNQSVVHVINRQTS-SSPPVLELLRALVLQCL 594
Query: 157 KLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQ 199
+LNI +PG NS+AD+LSR + W L P+ ++ Q
Sbjct: 595 RLNIWFKAQHVPGVKNSIADSLSRFQFMEFWRLAPNASQRGHQ 637
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
++N V DN++V+ I +Q S +L + L+L +LNI +PG NS+
Sbjct: 554 LSNRRVTFWCDNQSVVHVINRQTS-SSPPVLELLRALVLQCLRLNIWFKAQHVPGVKNSI 612
Query: 524 ADALSRQALIPDWHLLPSLTE 544
AD+LSR + W L P+ ++
Sbjct: 613 ADSLSRFQFMEFWRLAPNASQ 633
>gi|308475765|ref|XP_003100100.1| hypothetical protein CRE_21296 [Caenorhabditis remanei]
gi|308265905|gb|EFP09858.1| hypothetical protein CRE_21296 [Caenorhabditis remanei]
Length = 1034
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ +L N ++ KF L + L++ + AT D Y H+ I FL F
Sbjct: 196 LILDLSEFNKNLSPPKFTLETWKHAAPELRRMSFAATFDFKSGYHHVKIEENSSDFLAFS 255
Query: 378 YK----GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
Y+ L FGL++AP F ++ + R G++ +Y+DD L+ ++
Sbjct: 256 LTDPPTAPFYKYRALPFGLSTAPWLFTKIFRPIVGKWRREGIKVWLYIDDGLVVAE 311
>gi|427779981|gb|JAA55442.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 803
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 16/223 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + ++LN + + LQ Y +T+DL Y IP+ +
Sbjct: 328 DGSVRFCVDYRALNKITRKDVYPMPRIDDALDSLQGAQYFSTLDLRSGYWQIPMDEADKE 387
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE---RGVR---CLVYLDDFLLASQDPI 720
F P + F ++ G+C R+ + RG++ CL YLDD ++ S
Sbjct: 388 KTAFSTPDGLYEF--NVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVVFSSTFA 445
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQI------IPSHRVDYLGISWDTDLLQVRLPVDKI 774
++ + L L G Q+N KK + H V+ GI D D + L +
Sbjct: 446 DHLQRLDEVLTCLANAGLQLNTKKCHFGNTTIKVLGHLVNKDGIQPDPDKISAVLNFPR- 504
Query: 775 PPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASD 817
P R + L +F + F + P+ + ST A D
Sbjct: 505 -PFRTKELRSFLGLASYFRRFIRNFATIAAPLHKLLASTGAFD 546
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y +T+DL Y IP+ + F +Y+ + FGL +AP F ++ +
Sbjct: 361 LQGAQYFSTLDLRSGYWQIPMDEADKEKTAFSTPDGLYEFNVMPFGLCNAPATFERMIDT 420
Query: 406 VAVLLRERGVR---CLVYLDDFLLAS 428
V RG++ CL YLDD ++ S
Sbjct: 421 VL-----RGLKWKTCLCYLDDIVVFS 441
>gi|125842423|ref|XP_001336186.1| PREDICTED: hypothetical protein LOC795900 [Danio rerio]
Length = 1490
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LNS + + L + +L TIDLS+ Y IP+ + R
Sbjct: 1103 DGSIRFCIDFRYLNSVTKFDAYPTPRISDLTDRLGTSKFLTTIDLSKGYWQIPLTPQSRE 1162
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVL 722
F P + F+ + + G+ +RL ++ ++ L YLDD ++ S
Sbjct: 1163 LTAFKTPWGLFHFK--VLAFGLHGAPASFQRLMDQVLQGLPFTAAYLDDIVVYSDTWQQH 1220
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP----VDKIPPLR 778
+ + LQ L G VN +K I + +YLG +L+ ++ ++K P +
Sbjct: 1221 LQHLQEVLQRLQAAGLTVNPQKCTIAKAE-TEYLGFVIGKGVLRPQVEKVRAIEKCPQPQ 1279
Query: 779 DRLQTQALIELKWFYH----NLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSV-QGVW 833
R + ++ + + FYH N +G R + TD MVG+ S Q W
Sbjct: 1280 TRKELRSFLGMAGFYHRFIPNFSG---------RAAVLTD--------MVGSRSPNQLKW 1322
Query: 834 TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSD 871
TQ + +L++ + + ++ NP + VLQ+D
Sbjct: 1323 TQETVAAFQDLRKALS-KDSVLHNPDF--HQPFVLQTD 1357
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + +L TIDLS+ Y IP+ + R F ++ L+FGL AP +F +L +
Sbjct: 1136 LGTSKFLTTIDLSKGYWQIPLTPQSRELTAFKTPWGLFHFKVLAFGLHGAPASFQRLMDQ 1195
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
V L YLDD ++ S
Sbjct: 1196 VLQGL----PFTAAYLDDIVVYS 1214
>gi|357606157|gb|EHJ64935.1| hypothetical protein KGM_09682 [Danaus plexippus]
Length = 145
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 165 YFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWGI 203
+ +PG N +AD LSR +P+WHLLP+ T+++F+R GI
Sbjct: 93 HSVPGNLNRIADCLSRGKPVPEWHLLPATTKAIFERMGI 131
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 911 YFIPGKCNSLADALSRQALIPDWHLLPSLTESVFQRWGTISS 952
+ +PG N +AD LSR +P+WHLLP+ T+++F+R G + S
Sbjct: 93 HSVPGNLNRIADCLSRGKPVPEWHLLPATTKAIFERMGILRS 134
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 514 YFIPGKCNSLADALSRQALIPDWHLLPSLTESVFPRWG 551
+ +PG N +AD LSR +P+WHLLP+ T+++F R G
Sbjct: 93 HSVPGNLNRIADCLSRGKPVPEWHLLPATTKAIFERMG 130
>gi|326675757|ref|XP_003200423.1| PREDICTED: hypothetical protein LOC100536304 [Danio rerio]
Length = 1489
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 36/278 (12%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LNS + + L + +L TIDLS+ Y IP+ + R
Sbjct: 1102 DGSIRFCIDFRYLNSVTKFDAYPTPRISDLTDRLGTSKFLTTIDLSKGYWQIPLTPQSRE 1161
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVL 722
F P + F+ + + G+ +RL ++ ++ L YLDD ++ S
Sbjct: 1162 LTAFKTPWGLFHFK--VLAFGLHGAPASFQRLMDQVLQGLPFTAAYLDDIVVYSDTWQQH 1219
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP----VDKIPPLR 778
+ + LQ L G VN +K I + +YLG +L+ ++ ++K P +
Sbjct: 1220 LQHLQEVLQRLQAAGLTVNPQKCTIAKAE-TEYLGFVIGKGVLRPQVEKVRAIEKCPQPQ 1278
Query: 779 DRLQTQALIELKWFYH----NLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSV-QGVW 833
R + ++ + + FYH N +G R + TD MVG+ S Q W
Sbjct: 1279 TRKELRSFLGMAGFYHRFIPNFSG---------RAAVLTD--------MVGSRSPNQLKW 1321
Query: 834 TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSD 871
TQ + +L++ + + ++ NP + VLQ+D
Sbjct: 1322 TQETVAAFQDLRKALS-KDSVLHNPDF--HQPFVLQTD 1356
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + +L TIDLS+ Y IP+ + R F ++ L+FGL AP +F +L +
Sbjct: 1135 LGTSKFLTTIDLSKGYWQIPLTPQSRELTAFKTPWGLFHFKVLAFGLHGAPASFQRLMDQ 1194
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
V L YLDD ++ S
Sbjct: 1195 VLQGL----PFTAAYLDDIVVYS 1213
>gi|308458622|ref|XP_003091647.1| hypothetical protein CRE_18271 [Caenorhabditis remanei]
gi|308255420|gb|EFO99372.1| hypothetical protein CRE_18271 [Caenorhabditis remanei]
Length = 727
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 144/388 (37%), Gaps = 81/388 (20%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + +N + L N + L L T DL Y +P+ +
Sbjct: 171 DGSVRMCIDYRKVNLLIKYNAHPLPNIETTLLSLAGKKVFTTFDLLAGYWQLPLKEESKE 230
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI-------KLGRRLRERGVRCLVYLDDFLLASQDP 719
F I ++ + P I +G L G VY+DD L+AS++
Sbjct: 231 ITAFAIGSELFEWNVLPFGLATSPAIFQAAMECVVGDLL---GTCVFVYVDDLLIASENM 287
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQV-RLPVDKIPPL 777
+ L+ + G + LK S+ I VDYLG + ++ VDK+
Sbjct: 288 KEHAIHVQTILERIEKSG--MKLKASKCWIAREEVDYLGHMITPEGVKTEEAKVDKMKKF 345
Query: 778 ---RDRLQTQALIELKWFYHNL----------------------------TGFTPLHP-- 804
D Q Q+ + L +Y N F L
Sbjct: 346 ARPEDVKQLQSFLGLVGYYRNFIMSYSKIAYPLNFLTSKKNAWVWGTEQENAFVQLKSSV 405
Query: 805 --------PVPRTFMS--------TDASDVGWGAMVGNVSVQG----------VWTQAQR 838
P P T +S TDAS G GA++ + G T A+
Sbjct: 406 CSAPVLKQPDPETAISGARPYLIYTDASRQGVGAVLAQEANDGEQHPIAFASKSLTSAET 465
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
+HI E + A+ +++ V++ +D+K +I+ +R G + L+ + +L+
Sbjct: 466 RYHITDLEALAMMFALRRFRTIIYGSQVIVFTDHKPLISLMR--GSRLADRLMRWSIELI 523
Query: 899 LIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ N IV ++ GK N +ADALSR
Sbjct: 524 ----EFNPKIV--YVKGKANVVADALSR 545
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + + +N + L N + L L T DL Y +P+ +
Sbjct: 171 DGSVRMCIDYRKVNLLIKYNAHPLPNIETTLLSLAGKKVFTTFDLLAGYWQLPLKEESKE 230
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F +++ L FGLA++P F A + V LL G VY+DD L+AS++
Sbjct: 231 ITAFAIGSELFEWNVLPFGLATSPAIFQAAMECVVGDLL---GTCVFVYVDDLLIASEN 286
>gi|189236883|ref|XP_001807231.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1063
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y ++DL Y IP++ +++ F+ Y+ + FGL +AP+ F + N
Sbjct: 274 LQGGVYFTSLDLRSGYHQIPLSEESKKYTSFVTPFGQYEYNRVPFGLTNAPRTFQRFMNK 333
Query: 406 VAVLLRERGVRCLVYLDDFLLASQD-SVVLKN--QIFQTL 442
+ RE VYLDD L ++D + L+N ++F+ L
Sbjct: 334 ILKPARENAA---VYLDDVFLHAKDVNEALQNLQKVFEIL 370
>gi|365987588|ref|XP_003670625.1| hypothetical protein NDAI_0F00630 [Naumovozyma dairenensis CBS 421]
gi|343769396|emb|CCD25382.1| hypothetical protein NDAI_0F00630 [Naumovozyma dairenensis CBS 421]
Length = 1133
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+ +DL Y +PIA R F+ + YQ + FGL +AP F +L N V LR
Sbjct: 282 FSKLDLVSGYHQVPIAEEDRYKTAFITQRGQYQWNVMPFGLTNAPATFQRLMNHV---LR 338
Query: 412 ER-GVRCLVYLDDFLLASQ 429
+ G C+VYLDD L S+
Sbjct: 339 DYIGEFCIVYLDDILNYSK 357
>gi|384496204|gb|EIE86695.1| hypothetical protein RO3G_11406 [Rhizopus delemar RA 99-880]
Length = 352
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 355 IDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERG 414
+D++ Y +P+A F+ K +Y+ + FGL SAP F + N ++L G
Sbjct: 1 MDMAFGYWQVPMAEDSIEKTGFVTKKGIYEFLVMPFGLTSAPSTFQAMMN--SILGEYIG 58
Query: 415 VRCLVYLDDFLLASQDSVVLKNQIFQTLPVNLSGNCSRSGRR 456
CLV++DD L+ DS++ + + + + C +GR+
Sbjct: 59 KFCLVFIDDVLIFGGDSLMEHGALVEKVLI----KCKDAGRK 96
>gi|432888034|ref|XP_004075034.1| PREDICTED: uncharacterized protein LOC101156905 [Oryzias latipes]
Length = 1290
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 322 LKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGT 381
+ +SY T + LI L K YL TIDL + Y +P+ R + + F
Sbjct: 951 MSKFDSYPTPRIDDLIER------LGKAKYLTTIDLCKGYWQVPLTARSQEYTAFRTPWG 1004
Query: 382 VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+++ T L FGL AP F +L + V L G C YLDD ++ S
Sbjct: 1005 LFEFTVLPFGLHGAPATFQRLMDQVLGGL--DGFAC-AYLDDIVVYS 1048
>gi|270015991|gb|EFA12439.1| hypothetical protein TcasGA2_TC016174 [Tribolium castaneum]
Length = 467
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N L ++ + ++LN K+ L ++ L + ++DL Y HIP++
Sbjct: 284 NGQLRLVVDYRALNKITVQDKYPLPLIEEQLRRLAGGKFFTSLDLFSGYYHIPVSEDSIH 343
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
+ F+ + Y+ T + FGL +AP F ++ N L + R + L+YLDD L+
Sbjct: 344 YTAFITQDGHYEFTRVPFGLTNAPAVFQRMIN--TALGQLRFSKVLIYLDDILI 395
>gi|427791347|gb|JAA61125.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1056
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 16/223 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + ++LN + + LQ Y +T+DL Y IP+ +
Sbjct: 232 DGSVRFCVDYRALNKITRKDVYPMPRIDDALDSLQGAQYFSTLDLRSGYWQIPMDEADKE 291
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE---RGVR---CLVYLDDFLLASQDPI 720
F P + F ++ G+C R+ + RG++ CL YLDD ++ S
Sbjct: 292 KTAFSTPDGLYEF--NVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVVFSSTFA 349
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQI------IPSHRVDYLGISWDTDLLQVRLPVDKI 774
++ + L L G Q+N KK + H V+ GI D D + L +
Sbjct: 350 DHLQRLDEVLTCLANAGLQLNTKKCHFGNTTIKVLGHLVNKDGIQPDPDKISAVLNFPR- 408
Query: 775 PPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASD 817
P R + L +F + F + P+ + ST A D
Sbjct: 409 -PFRTKELRSFLGLASYFRRFIRNFATIAAPLHKLLASTGAFD 450
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y +T+DL Y IP+ + F +Y+ + FGL +AP F ++ +
Sbjct: 265 LQGAQYFSTLDLRSGYWQIPMDEADKEKTAFSTPDGLYEFNVMPFGLCNAPATFERMIDT 324
Query: 406 VAVLLRERGVR---CLVYLDDFLLAS 428
V RG++ CL YLDD ++ S
Sbjct: 325 VL-----RGLKWKTCLCYLDDIVVFS 345
>gi|68362780|ref|XP_690943.1| PREDICTED: hypothetical protein LOC562472 [Danio rerio]
Length = 1496
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 23/300 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R
Sbjct: 1093 DGTLRVCLDFRKLNAVSKFDTYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSRE 1152
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
F P+ + F+ G T + + + LR YLDD ++ S
Sbjct: 1153 CTAFRTPVGLYHFKTMPFGLHGAPATFQRLMNQVLRNCEEYSAAYLDDVVIYSTTWTDHV 1212
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQT 783
+ + + LQ + G +N+ K + YLG ++R VDK+ LR+ +
Sbjct: 1213 HHLHKILQKIQRAGLTLNVAKCEWA-RQETRYLGFQLGNG--EIRPQVDKVEALRNCPRP 1269
Query: 784 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV-----WTQAQR 838
+ E++ F L G+ R F+ + A + N++ + + WT+
Sbjct: 1270 RTKKEVRSFL-GLVGWY-------RRFIPQFSEK---AAPLTNLTAKAIKNPVPWTEECE 1318
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
I LKE + S P V + + + + A + ++ + H +L ++KLL
Sbjct: 1319 KAFITLKERMCTVPVLRS-PDFTKKFLVQVDASARGIGAVLMQEDEGQEHPILYLSRKLL 1377
Score = 46.2 bits (108), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R
Sbjct: 1096 LRVCLDFRKLNAVSKFDTYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSRECTA 1155
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +Y + FGL AP F +L N V LR YLDD ++ S
Sbjct: 1156 FRTPVGLYHFKTMPFGLHGAPATFQRLMNQV---LRNCEEYSAAYLDDVVIYS 1205
>gi|340367723|ref|XP_003382403.1| PREDICTED: hypothetical protein LOC100639764 [Amphimedon
queenslandica]
Length = 342
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 105/276 (38%), Gaps = 49/276 (17%)
Query: 698 LRERGVR-CLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQII-PSHRVDY 755
L GV+ L YLDDF++ D ++ Q + L T+ + L+ S++ PS + +
Sbjct: 39 LLHNGVKLSLHYLDDFIMVEGD--LVAAQEAKRLLCSTFEKLGLPLEPSKLEGPSTCLTF 96
Query: 756 LGISWDTDLLQVRLPVDKIPPLRD------------------------------------ 779
LGI D LQ+RLP +K+ L D
Sbjct: 97 LGIEVDKFNLQLRLPAEKLARLMDLLEETHGRKHILKKELESLTGLLQYAAKVGSAPDHK 156
Query: 780 -RLQTQALIELKW---FYHNLTGFT----PLHPPVPRTFMSTDASDVGWGAMVGNVSVQG 831
RL A ++ W F + G + P++ P S + G GA
Sbjct: 157 IRLNKPARADVMWWQMFVSSWNGISMLSGPMNSPADVEVFSDASGSWGGGAFCFPQWFAF 216
Query: 832 VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALL 891
W A S I +KEL V A + S VV S N +AYI + + L+
Sbjct: 217 KWPLALESTSIQVKELIPVVMAAALFGSSWKGKLVV-SSVNNEAVAYILNKTHSKESHLM 275
Query: 892 AETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
+ L+ + + IP K NSLADALSR
Sbjct: 276 HLIRLLVFYAAHFDFWFRAEHIPEKRNSLADALSRD 311
>gi|328717769|ref|XP_001947664.2| PREDICTED: hypothetical protein LOC100160378, partial
[Acyrthosiphon pisum]
Length = 1748
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L+ Y +++DL + HI +A R++ F+ Y+ + FGL + P F + N
Sbjct: 681 LRGKKYFSSLDLKDGFHHIEVAESSRKYTSFISPLGQYEFCKMPFGLCNGPSKFQRFVNN 740
Query: 406 VAVLLRERGVRCLVYLDDFLLAS---QDSVVLKNQIFQTL 442
+ + L + + LVY DD ++A+ +D + + +Q+F +
Sbjct: 741 IFIELIKTN-KVLVYFDDIIIATETLEDQLNILSQVFDLM 779
>gi|19919894|ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Carnation etched ring virus]
gi|130593|sp|P05400.1|POL_CERV RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
gi|58863|emb|CAA28360.1| unnamed protein product [Carnation etched ring virus]
gi|225356|prf||1301227E ORF 5
Length = 659
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 125/346 (36%), Gaps = 71/346 (20%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N L N ++ ++ ++ D + + + +
Sbjct: 280 GKKRMVVNYKAMNKATKGDAHNLPNKDELLTLVRGKKIYSSFDCKSGLWQVLLDKESQLL 339
Query: 668 LCFLIPMDMSSFRPS----LSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
F P + +P + P + C VY+DD L+ S K
Sbjct: 340 TAFTCPQGHYQWNVVPFGLKQAPSIFPKTYANSHSNQYSKYCCVYVDDILVFSNTG--RK 397
Query: 724 NQILQTLQLL---TYLGWQVNLKKSQIIPSHRVDYLGIS--------------------- 759
+ L +L LG ++ KK+Q+ ++++LG+
Sbjct: 398 EHYIHVLNILRRCEKLGIILSKKKAQLF-KEKINFLGLEIDQGTHCPQNHILEHIHKFPD 456
Query: 760 --WDTDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFYH------------NLT 797
D LQ L + D IP L R LQ++ + W ++ NL
Sbjct: 457 RIEDKKQLQRFLGILTYASDYIPKLASIRKPLQSKLKEDSTWTWNDTDSQYMAKIKKNLK 516
Query: 798 GFTPLHPPVP--RTFMSTDASDVGWGAMVGNVS---------VQGVWTQAQRSWHINLKE 846
F L+ P P + + TDAS+ WG ++ + G + A+R++H N KE
Sbjct: 517 SFPKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERNYHSNEKE 576
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI-------RKQGGL 885
L V I + ++++DNK ++ RKQG L
Sbjct: 577 LLAVIRVIKKFSIYLTPSRFLIRTDNKNFTHFVNINLKGDRKQGRL 622
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVS---------VQGVWTQAQRSWHIN 97
NL F L+ P P + + TDAS+ WG ++ + G + A+R++H N
Sbjct: 514 NLKSFPKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAERNYHSN 573
Query: 98 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI-------RKQGGL 139
KEL V I + ++++DNK ++ RKQG L
Sbjct: 574 EKELLAVIRVIKKFSIYLTPSRFLIRTDNKNFTHFVNINLKGDRKQGRL 622
>gi|327291161|ref|XP_003230290.1| PREDICTED: hypothetical protein LOC100557797, partial [Anolis
carolinensis]
Length = 1042
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Query: 18 DPIVLKNQILQTLQLLTYLAQALIELKWF--YHNLTGFTPLHPPVPRTFMSTDASDVGWG 75
DP+ I L + Y++Q+L W+ N+ P P ++TDAS GWG
Sbjct: 848 DPLTQSQNI--HLPVPAYVSQSL---HWWLSRDNVCVGVPFQQPQATVTLTTDASLYGWG 902
Query: 76 AMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRK 135
A G++ V+G WTQ + HINL EL V+ ++ H K+ I + +
Sbjct: 903 AHSGSLMVKGKWTQQEAQHHINLLELMAVQRSL---------HAFQDLCHGKSSIKTVSR 953
Query: 136 QGGLRS-HALLAE 147
Q L + HA++A+
Sbjct: 954 QSQLHTPHAVVAQ 966
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 801 PLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSL 860
P P ++TDAS GWGA G++ V+G WTQ + HINL EL V+ ++
Sbjct: 882 PFQQPQATVTLTTDASLYGWGAHSGSLMVKGKWTQQEAQHHINLLELMAVQRSL------ 935
Query: 861 VANHTVVLQSDNKTVIAYIRKQGGLRS-HALLAE 893
H K+ I + +Q L + HA++A+
Sbjct: 936 ---HAFQDLCHGKSSIKTVSRQSQLHTPHAVVAQ 966
>gi|427798349|gb|JAA64626.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 566
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
+ + LN+ + + + N ++ + ++ Y++T+DL + Y +P+ R R+ F+
Sbjct: 216 IDYRRLNAITREQTYPIPNLEERVETVSRSRYISTLDLVRGYWQVPLTERASRYAAFVSP 275
Query: 380 GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
Y+ LSFGL +AP F+ L + V L E L YLDD + S
Sbjct: 276 FGTYRPLMLSFGLKNAPYCFSGLMDRVLNGLSEFA---LPYLDDVAIFS 321
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
RP + + LN+ + + + N ++ + ++ Y++T+DL + Y +P+ R R+ F
Sbjct: 213 RPCIDYRRLNAITREQTYPIPNLEERVETVSRSRYISTLDLVRGYWQVPLTERASRYAAF 272
Query: 671 LIPMDMSSFRPSLSSPGV-----CPTIKLGRRLRERGVRCLVYLDDFLLAS 716
+ P ++RP + S G+ C + + R L L YLDD + S
Sbjct: 273 VSP--FGTYRPLMLSFGLKNAPYCFSGLMDRVLNGLSEFALPYLDDVAIFS 321
>gi|66799607|ref|XP_628729.1| hypothetical protein DDB_G0294338 [Dictyostelium discoideum AX4]
gi|60462063|gb|EAL60316.1| hypothetical protein DDB_G0294338 [Dictyostelium discoideum AX4]
Length = 693
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 136/331 (41%), Gaps = 28/331 (8%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+MR N LN+ ++ + + +I ++ + + +D+ Y I I +
Sbjct: 334 DGSMRMCINYTKLNNITVKDRYPIPDINEIWNQIKGSHVYSKLDMISGYYQIRIREGDKY 393
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRL------RERGVRCLVYLDDFLLASQDPI 720
F +P + F ++ G+C + +R E + + DD L S+ +
Sbjct: 394 LTAFSVPQGLFEF--NVMPFGLCNAPAVFQRTIHKIFKEENRLTLQSFYDDILSHSKSVM 451
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDR 780
+ + + L K Q V +LG +++ +Q+ D++ PL
Sbjct: 452 DHTPHLEGIFKKMRDNKLLAKLSKCQFF-QEEVKFLGHIIESNGVQI--DYDRLDPLMKL 508
Query: 781 LQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMV----GNVSVQG-VWTQ 835
L + + EL+ L F P + TDASD+G GA + G +S
Sbjct: 509 LDPKNVKELQRLIGTLNFFRKFKPFK----LETDASDIGVGATLCQDHGIISFYSRTIRD 564
Query: 836 AQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQ-GGLRSHALLAET 894
++++ + KE +V A+ ++ ++ +DN + ++++R G +R+ +
Sbjct: 565 TEKNYSASEKECLSVVCALEEFHYIIGTQETLVVTDN-SAVSFLRNDLGKIRNKRFINWN 623
Query: 895 KKLLLIMSKLNIHIVPYFIPGKCNSLADALS 925
KL + +I + GK N+ ADALS
Sbjct: 624 VKL------ASYNITFKYRSGKENTFADALS 648
>gi|427798415|gb|JAA64659.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 824
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS L I LQ + + T+DL+ Y IPI R + F
Sbjct: 137 DFRRLNSVTKKDVHPLPRMDDIMDRLQGSRFFTTLDLASGYWQIPIQERDKEKTAFATGS 196
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
Y+ + FGL +AP F + N VL + CL YLDD ++ S+
Sbjct: 197 GFYELNVVPFGLCNAPATFQRTIN--KVLASQLWKICLAYLDDIVVFSR 243
>gi|156058736|ref|XP_001595291.1| hypothetical protein SS1G_03380 [Sclerotinia sclerotiorum 1980]
gi|154701167|gb|EDO00906.1| hypothetical protein SS1G_03380 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1004
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 49/240 (20%)
Query: 705 CLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDL 764
C YLDD L+ S DP+ + Q+ L+ L G Q ++KK + + + YLG T+
Sbjct: 219 CTAYLDDILIYSNDPLEHEYQVKLVLERLRNAGLQADIKKCEFNIT-KTKYLGFIISTEG 277
Query: 765 LQVRLPVDKIPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMV 824
++V +++ AL H + P + TDASD G A V
Sbjct: 278 IEVD---------PEKVDVAALTSAPLLQH--------YDPELECMLETDASD-GVVACV 319
Query: 825 GNVSVQGVW----------TQAQRSWHINLKELFTV-------RAAISSNPSLVANHTVV 867
+ W A+ ++ ++ KE+ + RA ++S P H +
Sbjct: 320 LSQKHGEDWLPVAYYSKTMAPAELNYEVHDKEMLAIIKGFKNWRAELTSTP-----HQIR 374
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
+ +D+K + + + S L A + +++ N I + PGK N LADAL+R+
Sbjct: 375 VFTDHKALEYF------MTSKTLNARQARWAELLADYNFIIA--YRPGKDNPLADALTRR 426
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 20/135 (14%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKL---------INHQKIPLFLQKNDYLATIDLSQAYCH 363
N GL + + ++LN+ ++ L I H KI +D+ QA+
Sbjct: 117 NGGLRLCIDYRTLNALTRKDRYPLPLIDETLARITHAKI---------FTKLDIRQAFHR 167
Query: 364 IPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDD 423
I + F + Y+ L FGL + P + + N VL + C YLDD
Sbjct: 168 IRMDPDSEELTTFRTRYGAYKMKVLPFGLTNGPATYQRYMN--EVLFDYLDIFCTAYLDD 225
Query: 424 FLLASQDSVVLKNQI 438
L+ S D + + Q+
Sbjct: 226 ILIYSNDPLEHEYQV 240
>gi|23477352|gb|AAN34648.1| truncated pol protein [Drosophila melanogaster]
Length = 407
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 310 NLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARR 369
N+ ++ + + LN + ++ + N I + K Y TIDL+ + I + R
Sbjct: 233 NIGEKKWRLVIDFRKLNEKTVSDRYPIPNIADILDSIGKTMYFTTIDLASGFHQIQMNPR 292
Query: 370 HRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS 428
F + Y+ T + FGL +AP F + + N + L+ G CLVYLDD ++ S
Sbjct: 293 DASKTAFTVENGHYEFTRMPFGLKNAPATFQRVMDNVLGDLV---GNVCLVYLDDIIVFS 349
>gi|301623719|ref|XP_002941161.1| PREDICTED: hypothetical protein LOC100497966 [Xenopus (Silurana)
tropicalis]
Length = 855
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN F + ++ L YL T+DL++ Y +P+ + ++ F
Sbjct: 533 DFRKLNEVSKFDAFPMPRVDELIERLDPARYLTTLDLTKGYRQVPLNEQAKQKTAFSTPE 592
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
++Q L FGL AP F +L +WV L+ YLDD ++ S D
Sbjct: 593 DLFQYNVLPFGLHGAPATFQRLMDWV---LKPHRPYASAYLDDVVIFSTD 639
>gi|427779291|gb|JAA55097.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1155
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L+ Y +++DL Y I + R R F+ +Y+ L FGL SAP F +L +
Sbjct: 484 LRHARYFSSMDLKSGYWQIEVDERDREKTAFVTPDGLYEFKVLPFGLCSAPATFQRLMDT 543
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
V L+ + CLVYLDD ++ S
Sbjct: 544 VLSGLKWKT--CLVYLDDVIVFS 564
>gi|270016330|gb|EFA12776.1| hypothetical protein TcasGA2_TC005019 [Tribolium castaneum]
Length = 1226
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y++TIDL +Y IP++ R+ FLY G Y L FGL +A +F++ + VL
Sbjct: 691 YMSTIDLRSSYWQIPLSPESRQCTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMD--VVLG 748
Query: 411 RERGVRCLVYLDDFLLASQ---DSVVLKNQIFQTL 442
E + Y+DD L+ S+ + + Q+F+ L
Sbjct: 749 TEVREFVVNYIDDLLVVSETLNEHLEHLRQVFEKL 783
>gi|20136450|gb|AAM11674.1|AF492764_2 pol protein [Drosophila melanogaster]
Length = 849
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L I+ + + LN ++ + N +I L +++Y TIDL++ + I +
Sbjct: 224 LRIVIDYRKLNEITINDRYPMPNIDEILGKLGRSNYFTTIDLAKGFHQIEMDSESIAKTA 283
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS 428
F K Y+ T + FGL +AP F + ++N + LL + CLVYLDD ++ S
Sbjct: 284 FSTKYGHYEYTRMPFGLKNAPATFQRCMNNLLRPLLNK---NCLVYLDDIIVFS 334
>gi|307196129|gb|EFN77817.1| hypothetical protein EAI_17025 [Harpegnathos saltator]
Length = 251
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 45 WFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTV 104
W H +T + V T + DAS G ++ N + G WT+ ++ HIN EL +
Sbjct: 8 WRTHIITTNSFFRLAVIDTTIFIDASISGSRVVLENKQIHGFWTEIEKRQHINWLELKAI 67
Query: 105 RAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 164
A+ S + + + ++L+ DN T + I K G++ ++ N +
Sbjct: 68 WFALQSFEAELKDRHILLRVDNTTAVVCINKMEGIKYPKFNKLATQIWSWAENNNNWLHA 127
Query: 165 YFIPGKCNSLADALSR-QALIPDWHL 189
IP N +AD LSR + L +W L
Sbjct: 128 EHIPSTSNVVADRLSRLKNLDTEWEL 153
Score = 50.1 bits (118), Expect = 0.006, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 791 WFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTV 850
W H +T + V T + DAS G ++ N + G WT+ ++ HIN EL +
Sbjct: 8 WRTHIITTNSFFRLAVIDTTIFIDASISGSRVVLENKQIHGFWTEIEKRQHINWLELKAI 67
Query: 851 RAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 910
A+ S + + + ++L+ DN T + I K G++ ++ N +
Sbjct: 68 WFALQSFEAELKDRHILLRVDNTTAVVCINKMEGIKYPKFNKLATQIWSWAENNNNWLHA 127
Query: 911 YFIPGKCNSLADALSR-QALIPDWHL 935
IP N +AD LSR + L +W L
Sbjct: 128 EHIPSTSNVVADRLSRLKNLDTEWEL 153
>gi|1402848|gb|AAC28743.1| pol-like protein [Ceratitis capitata]
Length = 1060
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
L N ++ + + LNS ++ + ++ L N + + IDL + IP+
Sbjct: 245 LGNKQYRLVIDYRKLNSVTIADRYPIPEINEVLSHLGSNTFFSVIDLKSGFHQIPLKNSD 304
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
F Y+ T L FGL +AP F + + +LR+ G C VY+DD ++ S+
Sbjct: 305 IEKTAFSINNEKYEFTRLPFGLKNAPSIFQRT---LDDILRDYIGQCCYVYIDDIIIFSR 361
Query: 430 D----SVVLKNQIFQTL 442
+ S LKN IF TL
Sbjct: 362 NEKEHSTHLKN-IFTTL 377
>gi|440922552|gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
Length = 2027
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + L + I +Q + DL Y I + R + F
Sbjct: 974 IVYNYKRLNDNTHDDAYNLPHKDSILNLIQNKKIFSKFDLKSGYNQIKMKEEDRPWTAFT 1033
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS---QDSVVL 434
+++ LSFGL +AP F + + L ++ C+VY+DD L+AS Q+ +
Sbjct: 1034 CPEGLFEWNVLSFGLKNAPAIFQRFMD----SLFKKYEFCIVYIDDILVASDTVQEHIKH 1089
Query: 435 KNQIFQTL 442
+F+T+
Sbjct: 1090 LELVFKTI 1097
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 149/384 (38%), Gaps = 73/384 (19%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V+N K LN + L + I +Q + DL Y I + R +
Sbjct: 970 GKARIVYNYKRLNDNTHDDAYNLPHKDSILNLIQNKKIFSKFDLKSGYNQIKMKEEDRPW 1029
Query: 668 LCFLIPMDMSSFRPSLSSPGV--CPTI--KLGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
F P + F ++ S G+ P I + L ++ C+VY+DD L+AS
Sbjct: 1030 TAFTCPEGL--FEWNVLSFGLKNAPAIFQRFMDSLFKKYEFCIVYIDDILVASDTVQEHI 1087
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPV--------DKIP 775
+ + + G ++ KK++I ++ +++LG+ ++++ + DKI
Sbjct: 1088 KHLELVFKTIKEAGIVISKKKTEIAKTY-INFLGLKIGKGQIELQPHIVTKALEYPDKIE 1146
Query: 776 ---------------------------PLRDRLQTQALIE--------LKWFYHNLTGFT 800
PL +L+ I ++ + +
Sbjct: 1147 NKNKLQSFLGLLNYARKFIPNLSKLVGPLYSKLRKNGQIYFNNEDVRLVQKIKNEIKQLK 1206
Query: 801 PLHPPVPRTF--MSTDASDVGWGAMV-------GNVSVQGVWTQA-----QRSWHINLKE 846
PL P+ + + D+S GWGA++ + + A +W E
Sbjct: 1207 PLELPLENYYKVIEVDSSQDGWGAILITKPNEYAEKDTEKICAYASGNFKNNNWTSLDME 1266
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLN- 905
+ V AI++ L N L++D + ++ +++ + R H +K+ L + +
Sbjct: 1267 IQGVINAINTF-KLYLNKKFTLRTDCENIVKFMKNENS-RKH----NSKRWLNFQNAIQG 1320
Query: 906 -IHIVPY-FIPGKCNSLADALSRQ 927
++V + I GK N+LAD LSR+
Sbjct: 1321 MGYVVKFEHISGKSNTLADILSRK 1344
>gi|156847234|ref|XP_001646502.1| Tkp3 protein [Vanderwaltozyma polyspora DSM 70294]
gi|156117179|gb|EDO18644.1| Tkp3 protein [Vanderwaltozyma polyspora DSM 70294]
Length = 1233
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ R R F+ Y+ T + FGL +AP F S ++A L R
Sbjct: 355 FTTLDLHSGYHQIPMKREDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF---SRYMADLFR 411
Query: 412 ERGVRCLVYLDDFLLAS 428
E VYLDD L+ S
Sbjct: 412 EMKF-VNVYLDDILIFS 427
>gi|149239028|ref|XP_001525390.1| hypothetical protein LELG_03318 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450883|gb|EDK45139.1| hypothetical protein LELG_03318 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1026
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 65 MSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFTVRAAISSNPSL 114
+ TDAS WG ++ N GV + +++++ I KELF++ + + L
Sbjct: 448 IHTDASLESWGGVLQNTDENGVTRLVLCYSGKFHASEKNYTIFEKELFSIYHTLYAIHPL 507
Query: 115 VANHT--VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCN 172
+ +T + + DNK ++ + K L + + K L ++ N HI+ I G CN
Sbjct: 508 LVGYTGVIYIYCDNKALVHVLDKP--LENSHFVNRAYKWLNLIRSFNYHII--HIDGTCN 563
Query: 173 SLADALSRQAL 183
+ADALSR L
Sbjct: 564 VIADALSRCEL 574
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 811 MSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFTVRAAISSNPSL 860
+ TDAS WG ++ N GV + +++++ I KELF++ + + L
Sbjct: 448 IHTDASLESWGGVLQNTDENGVTRLVLCYSGKFHASEKNYTIFEKELFSIYHTLYAIHPL 507
Query: 861 VANHT--VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCN 918
+ +T + + DNK ++ + K L + + K L ++ N HI+ I G CN
Sbjct: 508 LVGYTGVIYIYCDNKALVHVLDKP--LENSHFVNRAYKWLNLIRSFNYHII--HIDGTCN 563
Query: 919 SLADALSRQAL 929
+ADALSR L
Sbjct: 564 VIADALSRCEL 574
>gi|241948055|ref|XP_002416750.1| transposable element polyprotein, putative [Candida dubliniensis
CD36]
gi|223640088|emb|CAX44334.1| transposable element polyprotein, putative [Candida dubliniensis
CD36]
Length = 923
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L +T+D+ Q Y + I + F G Y L FGL APQ F ++
Sbjct: 751 LHNAKIFSTLDMKQGYYQLKIHESTQPHTAFRVPGGTYCFQVLPFGLTDAPQVFG---SY 807
Query: 406 VAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
VA LL+E V VYLDD L+ S +FQ +
Sbjct: 808 VADLLQEFAVFTRVYLDDILVFSSSLKEHYQHLFQVI 844
>gi|340385330|ref|XP_003391163.1| PREDICTED: hypothetical protein LOC100633740, partial [Amphimedon
queenslandica]
Length = 449
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ G+ + + + LN + + +++ + +++ T+DL++ Y +P+ + R
Sbjct: 309 DGGIRLCVDYRQLNQVTKFDAYPMPRVEELLDTIGDAEFITTLDLAKGYWQVPVNEKDRE 368
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +YQ + FGL+ AP F ++ + +LR VYLDD ++ S
Sbjct: 369 KTAFTSPRGLYQFKTMPFGLSGAPATFQRMMD---EILRGTETFAGVYLDDIVIHS 421
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG +R + + LN + + +++ + +++ T+DL++ Y +P+ + R
Sbjct: 309 DGGIRLCVDYRQLNQVTKFDAYPMPRVEELLDTIGDAEFITTLDLAKGYWQVPVNEKDRE 368
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVRCL--VYLDDFLLASQDPIVL 722
F P + F+ P R + E RG VYLDD ++ S
Sbjct: 369 KTAFTSPRGLYQFKTMPFGLSGAPAT-FQRMMDEILRGTETFAGVYLDDIVIHSSIWRDH 427
Query: 723 KNQILQTLQLLTYLGWQVNLKK 744
NQ+ L+ L G + LKK
Sbjct: 428 LNQLTDVLKRLDDAGLTIKLKK 449
>gi|307212135|gb|EFN87992.1| hypothetical protein EAI_06111 [Harpegnathos saltator]
Length = 213
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 126
+DAS WGA G+ W+ R+ HIN EL A+ + +++ V+L+ DN
Sbjct: 8 SDASLNRWGASCGDSRTHVWWSADDRALHINTLELKAAFNALRCFTADLSDCDVLLRIDN 67
Query: 127 KTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
T +AYI K G ++ L A + ++ + NI I I N +AD SR
Sbjct: 68 TTALAYINKFGSVQYPRLPAISGEIGCWCEERNIFIFALTISSMENFIADCESR 121
Score = 49.7 bits (117), Expect = 0.007, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 55/114 (48%)
Query: 813 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 872
+DAS WGA G+ W+ R+ HIN EL A+ + +++ V+L+ DN
Sbjct: 8 SDASLNRWGASCGDSRTHVWWSADDRALHINTLELKAAFNALRCFTADLSDCDVLLRIDN 67
Query: 873 KTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
T +AYI K G ++ L A + ++ + NI I I N +AD SR
Sbjct: 68 TTALAYINKFGSVQYPRLPAISGEIGCWCEERNIFIFALTISSMENFIADCESR 121
>gi|91176519|gb|ABE26649.1| pol polyprotein [Nosema bombycis]
Length = 1270
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 645 YLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPS----LSSPGV--CPTIKLGRRL 698
+ + +DL + Y +P+A+ + F+ P+ FR ++P C K+ R L
Sbjct: 550 WFSQLDLERGYYQVPMAKESKELTAFMTPIGKFQFRKMPFGLTNAPATFQCLMYKVFRDL 609
Query: 699 RERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGI 758
+ VY+DD + S+ + + LQ+L G ++ +KS + + RVD LG
Sbjct: 610 --INTKVCVYMDDITIYSRTEEEHHRDLAEVLQVLLDNGLKLGKEKS-VFCTQRVDLLGF 666
Query: 759 SWDTDLLQVRLPVDK-IPPLRDRLQTQALIELKWFYHNLTGFTPLHP 804
S + P +K + P +D+L+ + +L F +L F P
Sbjct: 667 SVKNGKV---FPDEKRLGPFQDKLRISTIKQLHSFVGSLGYFRNFIP 710
>gi|391334995|ref|XP_003741883.1| PREDICTED: uncharacterized protein K02A2.6-like, partial
[Metaseiulus occidentalis]
Length = 890
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 126/327 (38%), Gaps = 65/327 (19%)
Query: 619 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSS 678
LN+ + K+ L Q I L + + IDL++AY I + R + P +
Sbjct: 539 LNNALQDDKYPLPTAQDIFSRLAGGKFFSKIDLAEAYLQIEVHPDDRNLITINTPKGL-- 596
Query: 679 FRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVLKNQILQTLQLLT 734
F + G+ L +R+ + + + +YLDD L+ + ++++L+ + +
Sbjct: 597 FEMTRLPFGLKTAPSLFQRIMDETLVGIPGTAIYLDDILVTGRTAKEHRDRVLKVMAKIQ 656
Query: 735 YLGWQVNLKKSQIIPSHRVDYLGISWDT-----DLLQVRLPVDKIPPLRDRLQTQALIEL 789
G+++ ++K + ++ YLG D D Q+R P+ ++P +D QA + L
Sbjct: 657 KGGFRIRMEKCSFL-QKQIKYLGFIIDEHGRRPDPAQIR-PIVELPTPKDAKDVQAFLGL 714
Query: 790 KWFYHNL--------TGFTPL---------------------------------HPPVPR 808
FY N TPL P +P
Sbjct: 715 VTFYSNFIPDMKRIKEPLTPLLRKNVKFVWTERCEEAFEQAKKILQSDLALTHYDPQLPL 774
Query: 809 TFMSTDASDVGWGAMV----------GNVSVQGVWTQAQRSWHINLKELFTVRAAISSNP 858
+S DAS G G ++ + V V T+ ++ + KE + A+
Sbjct: 775 E-VSADASQSGVGGVLLHTFPDGSKKAIMHVNKVLTETEKRYGQIEKEALALVFAVKKFH 833
Query: 859 SLVANHTVVLQSDNKTVIAYIRKQGGL 885
+ +L +D+K +++ + GGL
Sbjct: 834 KYIYGRHFILNTDHKPLLSVFKVDGGL 860
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN+ + K+ L Q I L + + IDL++AY I + R + +++
Sbjct: 539 LNNALQDDKYPLPTAQDIFSRLAGGKFFSKIDLAEAYLQIEVHPDDRNLITINTPKGLFE 598
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGV-RCLVYLDDFLLASQDSVVLKNQIFQTL 442
T L FGL +AP F ++ + V G+ +YLDD L+ + + ++++ + +
Sbjct: 599 MTRLPFGLKTAPSLFQRIMDETLV-----GIPGTAIYLDDILVTGRTAKEHRDRVLKVM 652
>gi|313213696|emb|CBY40594.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 652 SQAYCHIPIARRHRRFLCF-----LIPMDMSSFRPSLSSPGVCPTIK-LG-RRLRERGVR 704
+ Y +P+A ++ CF + ++ +F ++PG+ + +G LR+ G++
Sbjct: 10 ASGYHQMPLAAESKKMACFKWGNYIFENNILAFGIP-AAPGMYQLLNSVGINFLRQNGIK 68
Query: 705 CLVYLDDFLL----ASQD-------PIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRV 753
+YLDD LL S++ +L ++ L LG VN+KKS+ P+ R+
Sbjct: 69 ITLYLDDRLLIISPKSENHRKKLLTEEILCKEVWLVAATLVALGGFVNIKKSEFKPTQRI 128
Query: 754 DYLGISWDTDLLQVRLPVDKIPPLRDRL---QTQALIELK 790
++LG DT+ V +P + L+ R+ ++ ++ELK
Sbjct: 129 EFLGFILDTNKETVEIPEGRWNTLKKRMRDAESGKMVELK 168
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 358 SQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAV-LLRERGVR 416
+ Y +P+A ++ CF + +++ L+FG+ +AP + QL N V + LR+ G++
Sbjct: 10 ASGYHQMPLAAESKKMACFKWGNYIFENNILAFGIPAAPGMY-QLLNSVGINFLRQNGIK 68
Query: 417 CLVYLDDFLL 426
+YLDD LL
Sbjct: 69 ITLYLDDRLL 78
>gi|312383757|gb|EFR28710.1| hypothetical protein AND_02962 [Anopheles darlingi]
Length = 304
Score = 49.7 bits (117), Expect = 0.008, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + Y +T+DL + IPI R F Y+ T + GL ++P F +L N
Sbjct: 183 LGDSKYFSTLDLKSGFYQIPIHERDAPKTAFSTPYGHYEFTRMPMGLKNSPSTFQKLMN- 241
Query: 406 VAVLLRERGVRCLVYLDDFLL 426
VL RGVR +VYLDD ++
Sbjct: 242 -KVLYEIRGVRAVVYLDDIVV 261
>gi|159465941|ref|XP_001691170.1| hypothetical protein CHLREDRAFT_180868 [Chlamydomonas reinhardtii]
gi|158270313|gb|EDO96179.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1199
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 126
TDAS G+GA +QGV++ QR HI EL V A+ + + V+++ DN
Sbjct: 768 TDASGAGFGAAWEEAELQGVFSAQQRQSHIAWLELTAVVRALQTWAPRLKGRRVLVRCDN 827
Query: 127 KTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+A + G R + ++L + + + I G N+ AD LSRQ
Sbjct: 828 TQAVAAV-NHGSTRVKEGRSLCRQLAELAMQAGFEVRAEHIAGVANTRADRLSRQ 881
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 813 TDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDN 872
TDAS G+GA +QGV++ QR HI EL V A+ + + V+++ DN
Sbjct: 768 TDASGAGFGAAWEEAELQGVFSAQQRQSHIAWLELTAVVRALQTWAPRLKGRRVLVRCDN 827
Query: 873 KTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ 927
+A + G R + ++L + + + I G N+ AD LSRQ
Sbjct: 828 TQAVAAV-NHGSTRVKEGRSLCRQLAELAMQAGFEVRAEHIAGVANTRADRLSRQ 881
Score = 46.2 bits (108), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 606 GDGTMRPVFN--LKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARR 663
GD ++RP+ + +N+ + KL + ++ L + YL DL+ + H +A
Sbjct: 467 GD-SIRPIIDPTASGVNACMRQLPCKLPDLAELLQHLPQYGYLGKRDLASGFHHCVLAPE 525
Query: 664 HRRFLCFLIPMDMSSFR------PSLSSPGV------CPTIKLGRRLRERG--VRCLVYL 709
RRF+ F P + R + SP + T RG VR Y
Sbjct: 526 ARRFMAFRNPATGALQRYVALPFGASQSPAIFCELTAAATTIFQSECDRRGLQVRIFTYC 585
Query: 710 DDFLLASQD--PIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQV 767
DDF++ Q +V ++ L W++ + + ++++LG+ +DT L++
Sbjct: 586 DDFMIIGQQHADVVGAFAVMDVLGAELGFTWKLEKDQGRDTACQQLEFLGMMFDTVRLEM 645
Query: 768 RLPVDK 773
R+ DK
Sbjct: 646 RITPDK 651
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFL--YKGTVYQRTCLSFGLASAPQAFAQLSNWVAV 408
YL DL+ + H +A RRF+ F G + + L FG + +P F +L+
Sbjct: 507 YLGKRDLASGFHHCVLAPEARRFMAFRNPATGALQRYVALPFGASQSPAIFCELTAAATT 566
Query: 409 LLR----ERG--VRCLVYLDDFLLASQ 429
+ + RG VR Y DDF++ Q
Sbjct: 567 IFQSECDRRGLQVRIFTYCDDFMIIGQ 593
>gi|91176523|gb|ABE26651.1| pol polyprotein [Nosema bombycis]
Length = 1022
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 135/345 (39%), Gaps = 79/345 (22%)
Query: 646 LATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGV-- 703
+ IDL + I +A R F + F V IK G +L ++ +
Sbjct: 342 FSKIDLKNGFNQIELATESRDVTSF------TMFGLQYRYKRVPFGIKSGPKLFQKTISQ 395
Query: 704 ------RCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
C VY+DD L+ + + + L L ++N KS+ +++++ LG
Sbjct: 396 ILDGINNCSVYIDDILIYGETVEEHNETLNRVLDKLEQYHVKINFNKSEF-GANKIEILG 454
Query: 758 -------ISWDTDLLQVRLPVDKIPPLRDRLQ----------------TQALIEL----- 789
+ DT L+ L + P + +Q ++ LI L
Sbjct: 455 NHIEDGKLKIDTTSLKNMLEIRNKTPSKKEIQGVLGVITWYRNFIPDVSRRLISLTRLLS 514
Query: 790 -----KWFYHNLTGFTPLH-----------PPVPRTF-MSTDASDVGWGAM-------VG 825
+W + L P V + F + DASD+G GA+ +G
Sbjct: 515 KETTEEWGMEQIVVLNSLKHDILTKAHLTLPDVNKIFKLQCDASDLGMGAVLFQEHGVIG 574
Query: 826 NVSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGL 885
S + ++ ++++ I KE+F + + L+ + +++D++ I
Sbjct: 575 YFSKK--FSDCEKNYSIVEKEMFAIVRTLEHFRYLIQGFPIQVETDSRNCI--------F 624
Query: 886 RSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 930
+ + T++ LI+++ +I I +PGK N++AD LSR LI
Sbjct: 625 ENKEISKRTERWKLILNEFDIKITN--MPGKENNVADGLSRCYLI 667
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 58 PPVPRTF-MSTDASDVGWGAM-------VGNVSVQGVWTQAQRSWHINLKELFTVRAAIS 109
P V + F + DASD+G GA+ +G S + ++ ++++ I KE+F + +
Sbjct: 545 PDVNKIFKLQCDASDLGMGAVLFQEHGVIGYFSKK--FSDCEKNYSIVEKEMFAIVRTLE 602
Query: 110 SNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPG 169
L+ + +++D++ I + + T++ LI+++ +I I +PG
Sbjct: 603 HFRYLIQGFPIQVETDSRNCI--------FENKEISKRTERWKLILNEFDIKITN--MPG 652
Query: 170 KCNSLADALSRQALI 184
K N++AD LSR LI
Sbjct: 653 KENNVADGLSRCYLI 667
>gi|440800943|gb|ELR21969.1| hypothetical protein ACA1_325410 [Acanthamoeba castellanii str.
Neff]
Length = 305
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 45/204 (22%)
Query: 729 TLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQ-TQALI 787
TL LLT LGW VN +KS + PS ++LG L VD + LR ++ +QA I
Sbjct: 15 TLALLTNLGWSVNWEKSSLEPSQAKEFLG-----------LIVDMMVELRFCIKLSQAAI 63
Query: 788 ELKWFYHN----LTGFTPLHPPVPRTF-MSTDASDVGWGAMVGNVSVQGVWTQAQRSWHI 842
HN L G + V T+ + + + +GW W + HI
Sbjct: 64 ------HNLEEWLAGLSKWDGRVVLTWPLDSSTTSMGW------------WKHCSQ--HI 103
Query: 843 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALL-AETKKLLLIM 901
N EL V A+ + + ++L +N T + YI+ H ++ T K+ +
Sbjct: 104 NKLELKAVHQALKALLPCLWGKLILLHCNNVTAVVYIK-------HLVMNCMTHKIFDLC 156
Query: 902 SKLNIHIVPYFIPGKCNSLADALS 925
NI ++ +PG N+ AD LS
Sbjct: 157 EHHNIQLLAIHLPGVENNRADHLS 180
>gi|410932271|ref|XP_003979517.1| PREDICTED: uncharacterized protein LOC101074616, partial [Takifugu
rubripes]
Length = 993
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 113/304 (37%), Gaps = 73/304 (24%)
Query: 584 WVFPPPPLLQVLHHLNDAQGLYGDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKN 643
W FP LH + A DGT RP + + LN+ ++ + + Q + L
Sbjct: 355 WAFP-------LHMVPKA-----DGTWRPCGDFRRLNNITAHDRYPIPHIQDFSVRLAGT 402
Query: 644 DYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSF-RPSLSSPGVCPTIKLGRRLRERG 702
+ +DL + Y +P+ + P + F R G T + RL +
Sbjct: 403 TIFSKVDLVRGYHQVPVRAEDVPKTAVITPFGLFEFLRMPFGLKGAAQTFQ---RLMDSV 459
Query: 703 VRCL----VYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLG 757
+R L VYLDD L+AS + Q Q L G VN K Q +P +D+LG
Sbjct: 460 LRDLTFVFVYLDDILVASPSADEHLTHLGQVFQRLADHGLIVNPAKCQFGLPV--IDFLG 517
Query: 758 ISWDTDLLQVRLP-----VDKIP------------------------------PLRDRLQ 782
+D V LP V + P PL + L+
Sbjct: 518 HRISSD-GAVPLPSKVQVVAEFPRPVSVKALQEFLGMVNFYNRFLPRAAHLLQPLYEALR 576
Query: 783 TQ-ALIELKWFYHNLTGF----------TPLHPPVPRT--FMSTDASDVGWGAMVGNVSV 829
+ A ++ W + F T L P PR ++TDASDV GA+V SV
Sbjct: 577 MKRATDQVDWTTERVQAFEGAKSALANATLLAHPAPRADIALTTDASDVAVGAVVEQ-SV 635
Query: 830 QGVW 833
G W
Sbjct: 636 GGAW 639
>gi|340383987|ref|XP_003390497.1| PREDICTED: uncharacterized protein K02A2.6-like [Amphimedon
queenslandica]
Length = 1319
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 604 LYGDGTMRPVFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIAR 662
L GDG++R + K ++N + + L + + L + +DL AY +P+
Sbjct: 497 LKGDGSIRLCGDYKVTVNPVLHVDTYPLPRIEDLFAALSGGKVFSKLDLKHAYLQVPLDE 556
Query: 663 RHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQD 718
+++ P + F+ GV L +R+ E +R L VYLDD L+ +D
Sbjct: 557 DSKKYTTINTPKGL--FQYERLPFGVASAPSLFQRIMENLLRDLPQVSVYLDDILVTGRD 614
Query: 719 PIVLKNQILQTLQLLTYLGWQVNLKKSQI---IPSHRVDYLGISWDTDLLQVRLPVD-KI 774
N + LQ L G + LKKS+ +PS V+YLG D L P + K+
Sbjct: 615 TSDHLNNLHLVLQRLESAG--LTLKKSKCTFAVPS--VEYLGHVIDAQGLH---PSESKV 667
Query: 775 PPLRDRLQTQALIELKWF------YHNL-----TGFTPLH 803
+RD + ELK F YH T +PLH
Sbjct: 668 KAIRDAPSPTNITELKSFLGLLNYYHKFLPNLSTVLSPLH 707
>gi|308446277|ref|XP_003087141.1| hypothetical protein CRE_30354 [Caenorhabditis remanei]
gi|308260969|gb|EFP04922.1| hypothetical protein CRE_30354 [Caenorhabditis remanei]
Length = 739
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 143/388 (36%), Gaps = 81/388 (20%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + +N + L N + L L T DL Y +P+ +
Sbjct: 29 DGSVRMCIDYRKVNLLIKYNAHPLPNIETTLLSLAGKKVFTTFDLLAGYWQLPLKEESKE 88
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI-------KLGRRLRERGVRCLVYLDDFLLASQDP 719
F I ++ + P I +G L G VY+DD L+AS++
Sbjct: 89 ITAFAIGSELFEWNVLPFGLATSPAIFQAAMECVVGDLL---GTCVFVYVDDLLIASENM 145
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQV-RLPVDKIPPL 777
+ L+ + G + LK S+ I VDYLG + ++ VDK+
Sbjct: 146 KEHAIHVQTILERIEKSG--MKLKASKCWIAREEVDYLGHMITPEGVKTEEAKVDKMKKF 203
Query: 778 ---RDRLQTQALIELKWFYHNL----------------------------TGFTPLHP-- 804
D Q Q+ + L +Y N F L
Sbjct: 204 ARPEDVKQLQSFLGLVGYYRNFIMSYSKIAYPLNFLTSKKNAWVWGTEQENAFVQLKSSV 263
Query: 805 --------PVPRTFMS--------TDASDVGWGAMVGNVSVQG----------VWTQAQR 838
P P T +S TDAS G GA++ + G T A+
Sbjct: 264 CSAPVLRQPDPETAISGARPYLIYTDASRQGVGAVLAQEANDGEQHPIAFASKSLTSAET 323
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
+HI E + A+ +++ V++ +D+K +I+ +R G + L+ + +L+
Sbjct: 324 RYHITDLEALAMMFALRRFRTIIYGSQVIVFTDHKPLISLMR--GSRLADRLMRWSIELI 381
Query: 899 LIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ N IV + GK N +ADALSR
Sbjct: 382 ----EFNPKIVS--VKGKANVVADALSR 403
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + + +N + L N + L L T DL Y +P+ +
Sbjct: 29 DGSVRMCIDYRKVNLLIKYNAHPLPNIETTLLSLAGKKVFTTFDLLAGYWQLPLKEESKE 88
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F +++ L FGLA++P F A + V LL G VY+DD L+AS++
Sbjct: 89 ITAFAIGSELFEWNVLPFGLATSPAIFQAAMECVVGDLL---GTCVFVYVDDLLIASEN 144
>gi|9247192|gb|AAA91923.2| pol protein [Simian immunodeficiency virus]
Length = 1057
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 343 PLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY-------KGTVYQRTCLSFGLASA 395
P LQK + ID+ AY IP+ + R++ F G YQ CL G +
Sbjct: 291 PAGLQKKKQITVIDIGDAYYSIPLCKEFRKYTAFTIPSVNNTGPGIRYQFNCLPQGWKGS 350
Query: 396 PQAFAQLSNWVAVLLRE-----RGVRCLVYLDDFLLASQDSVVLKNQ 437
P F N A +L E G+ + Y+DD LAS NQ
Sbjct: 351 PTIF---QNTAANILEEIKRHTPGLEIVQYMDDLWLASDHDETRHNQ 394
>gi|340381946|ref|XP_003389482.1| PREDICTED: hypothetical protein LOC100637556 [Amphimedon
queenslandica]
Length = 550
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 327 SYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRT 386
S + + + N +I L + L DL AY +P+ L +++G ++
Sbjct: 137 SLASIRYASVDNAVEIIRSLGRGALLTKFDLKDAYRIVPVHPSDHHRLGIMWEGAIFVDC 196
Query: 387 CLSFGLASAPQAFAQLSNWVAVLLRERGVRCLV-YLDDFLL------ASQDSVVLKNQIF 439
CL FGL SAP+ F+ +++ +A + G+ V YLDDFL + V L + I
Sbjct: 197 CLPFGLRSAPKFFSAIADSLAWVFGCYGLVSQVHYLDDFLFLEPPGHTNSSIVPLVSSIC 256
Query: 440 QTLPVNLSGN 449
TL V+L+ +
Sbjct: 257 CTLGVSLAAH 266
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 93/269 (34%), Gaps = 52/269 (19%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQV 767
YLDDFL + + + LG + K++ P+ + +LGI D ++
Sbjct: 231 YLDDFLFLEPPGHTNSSIVPLVSSICCTLGVSLAAHKTEG-PATCLTFLGIVVDFTHWEL 289
Query: 768 RLPVDKI----------------------------------------PPLRDRLQTQALI 787
RLP DK+ P RL A
Sbjct: 290 RLPDDKLELVYALLQVWSRHSSCRRRELESFLGHLSHAAVVIRQARQPHFFVRLTRGAKA 349
Query: 788 ELKW---FYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ----AQRSW 840
++ W F G + P P + TDA+ G V+G W Q +
Sbjct: 350 DISWWLCFLRRWNGRSFFPPSTPSVHVYTDAAG---SFGCGGFQVRGPWFQLAWPGELRR 406
Query: 841 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 900
I + EL V A S V SDN+ V+ + K G R +L + L L+
Sbjct: 407 SIAVLELIPVVIAAMLWGSSWRGSMVCFHSDNEAVVKVLNK-GFARDSSLSHLLRCLALL 465
Query: 901 MSKLNIHIVPYFIPGKCNSLADALSRQAL 929
+ HI +PG N ADALSR L
Sbjct: 466 AAFHGFHICAIHVPGWLNDAADALSRNNL 494
>gi|301608127|ref|XP_002933648.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1391
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 22/162 (13%)
Query: 38 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVG-----NVSVQGV------ 86
QA I+LK + P P T + DAS+ GA++ N + V
Sbjct: 782 QAFIDLKKRFTTAPILRHSDPAYPFT-LEVDASEYAIGAVLSQRTDFNCQLHPVAFFSRK 840
Query: 87 WTQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHAL 144
+Q+++++ + +EL +++A L+ ANH +++ SD+K + Y+R LR
Sbjct: 841 LSQSEQNYDVGDRELLAIKSAFQEWRHLLEGANHPILVFSDHKN-LEYLRSAKRLR---- 895
Query: 145 LAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD 186
+ L S+ N H+ F PG N ADALSR P+
Sbjct: 896 -PRQARWALFFSRFNFHVT--FRPGSKNGKADALSRMFPAPE 934
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 22/162 (13%)
Query: 784 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVG-----NVSVQGV------ 832
QA I+LK + P P T + DAS+ GA++ N + V
Sbjct: 782 QAFIDLKKRFTTAPILRHSDPAYPFT-LEVDASEYAIGAVLSQRTDFNCQLHPVAFFSRK 840
Query: 833 WTQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHAL 890
+Q+++++ + +EL +++A L+ ANH +++ SD+K + Y+R LR
Sbjct: 841 LSQSEQNYDVGDRELLAIKSAFQEWRHLLEGANHPILVFSDHKN-LEYLRSAKRLR---- 895
Query: 891 LAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD 932
+ L S+ N H+ F PG N ADALSR P+
Sbjct: 896 -PRQARWALFFSRFNFHVT--FRPGSKNGKADALSRMFPAPE 934
>gi|328868843|gb|EGG17221.1| hypothetical protein DFA_08209 [Dictyostelium fasciculatum]
Length = 1581
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + N Q+ L K++ IDL Y I +++ + F Y G Y
Sbjct: 813 LNDATVADTYPQKNLQEGKERLSKSERKTVIDLKSGYHQINLSKESQYLTTFSYGGEHYM 872
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVL 434
T FGL ++ F + W+ +L + + C Y+DD + ++D++ L
Sbjct: 873 FTRACFGLKNSGAFF---NRWINDVLEKEEINCERYVDDLAIGTEDNIDL 919
>gi|308475019|ref|XP_003099729.1| hypothetical protein CRE_23634 [Caenorhabditis remanei]
gi|308266384|gb|EFP10337.1| hypothetical protein CRE_23634 [Caenorhabditis remanei]
Length = 1538
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 144/388 (37%), Gaps = 81/388 (20%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + +N + L N + L L T DL Y +P+ +
Sbjct: 1053 DGSVRMCIDYRKVNLLIKYNAHPLPNIETTLLSLAGKKVFTTFDLLAGYWQLPLKEESKE 1112
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTI-------KLGRRLRERGVRCLVYLDDFLLASQDP 719
F I ++ + P I +G L G VY+DD L+AS++
Sbjct: 1113 ITAFAIGSELFEWNVLPFGLATSPAIFQAAMECVVGDLL---GTCVFVYVDDLLIASENM 1169
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQV-RLPVDKIPPL 777
+ L+ + G + LK S+ I VDYLG + ++ VDK+
Sbjct: 1170 KEHAIHVQTILERIEKSG--MKLKASKCWIAREEVDYLGHMITPEGVKTEEAKVDKMKKF 1227
Query: 778 ---RDRLQTQALIELKWFYHNL----------------------------TGFTP----- 801
D Q Q+ + L +Y N F
Sbjct: 1228 ARPEDVKQLQSFLGLVGYYRNFIMSYSKIAYPLNFLTSKKNAWVWGTEQENAFVQLKSSV 1287
Query: 802 -----LHPPVPRTFMS--------TDASDVGWGAMVGNVSVQGVW----------TQAQR 838
L P P T +S TDAS G GA++ + G T A+
Sbjct: 1288 CSAPVLRQPDPETAISGARPYLIYTDASRQGVGAVLAQEANDGEQHPIAFASKSLTSAET 1347
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
+HI E + A+ +++ V++ +D+K +I+ +R G + L+ + +L+
Sbjct: 1348 RYHITDLEALAMMFALRRFRTIIYGSQVIVFTDHKPLISLMR--GSRLADRLMRWSIELI 1405
Query: 899 LIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ N IV ++ GK N +ADALSR
Sbjct: 1406 ----EFNPKIV--YVKGKANVVADALSR 1427
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 344 LFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF-AQL 402
L L T DL Y +P+ + F +++ L FGLA++P F A +
Sbjct: 1084 LSLAGKKVFTTFDLLAGYWQLPLKEESKEITAFAIGSELFEWNVLPFGLATSPAIFQAAM 1143
Query: 403 SNWVAVLLRERGVRCLVYLDDFLLASQD 430
V LL G VY+DD L+AS++
Sbjct: 1144 ECVVGDLL---GTCVFVYVDDLLIASEN 1168
>gi|2791289|emb|CAA04050.1| RNase H [Drosophila melanogaster]
Length = 1217
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
N ++ + + LN + ++ + N I + K Y +T+DL+ + I + +
Sbjct: 367 GNRKWRLVIDYRKLNDKTISDRYPIPNINDILDSIGKAKYFSTLDLTSGFHQIEMNPKDI 426
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +G Y+ T + FGL +AP F ++ + +VL G CL YLDD ++ S
Sbjct: 427 AKTAFTVEGGHYEFTRMPFGLKNAPATFQRVMD--SVLGDLNGTICLFYLDDIIIFS 481
>gi|340384546|ref|XP_003390772.1| PREDICTED: enzymatic polyprotein-like [Amphimedon queenslandica]
Length = 578
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 111/294 (37%), Gaps = 76/294 (25%)
Query: 702 GVRCLV-YLDDFLLASQDPIVLKNQILQT-LQLLTYLGWQVNLKKSQIIPSHRVDYLGIS 759
GV L+ YLDDF S+ Q L+T + L LG K + P + +LGI
Sbjct: 212 GVHNLIHYLDDFFFCSRAESSECEQALRTAVNLCQRLGLPAAPHKV-VGPCTTITFLGIE 270
Query: 760 WDTDLLQVRLPVD----------------------------------------------- 772
D+ ++RLP D
Sbjct: 271 IDSCRWELRLPEDKQTRLMSILQEWKHDKRQSVTKKQLQSLVGLLNYAARIVRPGRPFTR 330
Query: 773 ------KIPPLRD---RLQTQALIELKWF-----YHNLTGFTPLHPPVPRTFMSTDASDV 818
KIP D RL + ++ W+ + N F P P + +DAS
Sbjct: 331 SLIEASKIPQEPDHWVRLNVECRSDISWWQEFLRFWNGRSFYPGRPWAATVY--SDASGR 388
Query: 819 GWGAMVGNVSVQGVWTQAQ--RSWH---INLKELFTVRAAISSNPSLVANHTVVLQSDNK 873
WG + V G W Q Q SW+ I KEL + +++ A V+ + DN
Sbjct: 389 -WGCGAVCLPV-GQWFQVQWPESWYSISIAAKELLPIVVSVAVWGREWAGLRVLSRCDND 446
Query: 874 TVIAYIRKQGGLRSHALLAETKKLLLIMSKLN-IHIVPYFIPGKCNSLADALSR 926
V+A +R G LLA K+L ++S L+ I +V + G+ N ADALSR
Sbjct: 447 AVVACLRS--GSAKDPLLAHLLKILALLSALHKIQLVAVHVAGRSNGAADALSR 498
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
++ ++A +D+ AY +P+ + L ++G + L FGL SAP F +++ ++
Sbjct: 146 QSAWMAKLDIQSAYRKVPVHPADQPLLGIHWRGVTFCDRALPFGLRSAPLLFTAVADGLS 205
Query: 408 VLLRERGVRCLV-YLDDFLLASQDSVVLKNQIFQTLPVNLSGNCSRSGRRSHPTHSLVAN 466
+ GV L+ YLDDF S+ Q +T VNL C R G + P H +V
Sbjct: 206 WAMECCGVHNLIHYLDDFFFCSRAESSECEQALRT-AVNL---CQRLGLPAAP-HKVVGP 260
Query: 467 HTVV 470
T +
Sbjct: 261 CTTI 264
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 47 YHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ--RSWH---INLKEL 101
+ N F P P + +DAS WG + V G W Q Q SW+ I KEL
Sbjct: 365 FWNGRSFYPGRPWAATVY--SDASGR-WGCGAVCLPV-GQWFQVQWPESWYSISIAAKEL 420
Query: 102 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLN-I 160
+ +++ A V+ + DN V+A +R G LLA K+L ++S L+ I
Sbjct: 421 LPIVVSVAVWGREWAGLRVLSRCDNDAVVACLRS--GSAKDPLLAHLLKILALLSALHKI 478
Query: 161 HIVPYFIPGKCNSLADALSR 180
+V + G+ N ADALSR
Sbjct: 479 QLVAVHVAGRSNGAADALSR 498
>gi|406699347|gb|EKD02552.1| putative retrotransposon nucleocapsid protein [Trichosporon asahii
var. asahii CBS 8904]
Length = 1796
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + ++LN ++ + I L+ + + ++ DL++ Y IP R +
Sbjct: 1099 NGQWRMCVDYRALNKITVGDQYPVPRVFDILDSLEGSHWFSSFDLNKGYYQIPTTPRAAK 1158
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
L F + +Y+ + FG AP AF +L + +L R + CL Y+DD ++ S+
Sbjct: 1159 RLAFRTQDGLYEPLRMPFGAKGAPAAFQRLMD--TLLAEGRWLWCLAYIDDIIVYSK 1213
>gi|301623455|ref|XP_002941032.1| PREDICTED: hypothetical protein LOC100491299 [Xenopus (Silurana)
tropicalis]
Length = 704
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 14/230 (6%)
Query: 708 YLDDFLLASQDPIVLKNQILQT-LQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ 766
YLDDFL + +L T L + G + +K+ + P+ + +LGI DT ++
Sbjct: 447 YLDDFLFLGPRGSNTCSILLNTFLHYSSKFGVPIAREKT-VAPTTSLQFLGIEIDTMHME 505
Query: 767 VRLPVDKIPPLRDRLQTQALIELKW---FYHNLTGFTPLHPPVPRTFMS--TDAS-DVGW 820
RLP KI L+ L AL+ K +L G + + + TDA+ G+
Sbjct: 506 FRLPEAKISKLKS-LIASALVAKKLKLKHIQSLIGTCWQEDFIENSAIQLFTDAAGSTGF 564
Query: 821 GAMVGNVSVQGVWTQAQRSWHIN----LKELFTVRAAISSNPSLVANHTVVLQSDNKTVI 876
GA + W R + L E+F V A+ S +AN ++L N V+
Sbjct: 565 GAYLSGRWCCAAWPSEWRKQELTGNLVLLEIFPVLVALEIWGSWLANRRILLFCHNMGVV 624
Query: 877 AYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
I +S ++ + L+ + NI + IPG N LADALSR
Sbjct: 625 QVINNLSA-KSPPVVRVMRHLVFLALMHNIWLRAKHIPGCQNILADALSR 673
>gi|242816502|ref|XP_002486791.1| gag/polymerase/env polyprotein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715130|gb|EED14553.1| gag/polymerase/env polyprotein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1787
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLA------TIDLSQAYCHIPI 366
+ GL + + + LN+ ++ L PL + D LA +DL AY I I
Sbjct: 786 DGGLRLCVDYRGLNAITIKNRYPL------PLIGETIDRLAGAKIYTQLDLRDAYHRIRI 839
Query: 367 ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFL 425
F + Y+ T + FGLA+AP F A ++ +A LL + C+ YLDD +
Sbjct: 840 KEGDEWKTAFRTRYGHYEYTVMPFGLANAPATFQAYVNRALADLL---DICCVAYLDDII 896
Query: 426 LASQDSVVLKNQIFQTL 442
+ SQD + + + L
Sbjct: 897 IYSQDESSHTDDVQRVL 913
>gi|22535297|ref|NP_687035.1| Gag-Pol [Simian immunodeficiency virus]
gi|158931136|sp|Q02836.2|POL_SIVG1 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1472
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 343 PLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY-------KGTVYQRTCLSFGLASA 395
P LQK + ID+ AY IP+ + R++ F G YQ CL G +
Sbjct: 706 PAGLQKKKQITVIDIGDAYYSIPLCKEFRKYTAFTIPSVNNTGPGIRYQFNCLPQGWKGS 765
Query: 396 PQAFAQLSNWVAVLLRE-----RGVRCLVYLDDFLLASQDSVVLKNQ 437
P F N A +L E G+ + Y+DD LAS NQ
Sbjct: 766 PTIF---QNTAANILEEIKRHTPGLEIVQYMDDLWLASDHDETRHNQ 809
>gi|270356908|gb|ACZ80693.1| putative retrotransposon nucleocapsid protein [Filobasidiella
depauperata]
Length = 1481
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLF------LQKNDYLATIDLSQAYCHIP 365
++ L + + ++LN T ++ L PL L + + + IDL AY I
Sbjct: 545 SDGSLRLCVDYRNLNDITTKNRYPL------PLIGESLDRLSEASWFSKIDLRAAYHLIR 598
Query: 366 IARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDF 424
I + F + +Y+ + FGL +AP +F L N V LRE + +VYLDD
Sbjct: 599 IKKGDEWKTAFRTRYGLYEYQVMPFGLTNAPASFQNLINDV---LREYLDLSVIVYLDDI 655
Query: 425 LLAS---QDSVVLKNQIFQTLPVNL----SGNC 450
L+ S ++ VV NQ+ + L N +G C
Sbjct: 656 LIFSKTREEHVVHVNQVLEKLKENQLWANAGKC 688
>gi|301605103|ref|XP_002932203.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like, partial [Xenopus (Silurana) tropicalis]
Length = 832
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 28/165 (16%)
Query: 38 QALIELKWFYHNLTGFTPL--HPPVPRTF-MSTDASDVGWGAMVGNVS-----------V 83
QA ELK + + P+ HP R F + DAS+ GA++ +
Sbjct: 513 QAFTELKRSFTS----APILRHPDPARPFILEVDASEHAVGAVLSQRADFKNQLHPVAFF 568
Query: 84 QGVWTQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRS 141
+Q++R++ + +EL +++A L+ ANH +++ SD+K + Y+R LR
Sbjct: 569 SRKLSQSERNYDVGDRELLAIKSAFQEWRHLLEGANHPILVFSDHKN-LEYLRSAKRLR- 626
Query: 142 HALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD 186
+ L S+ N H+ F PG N ADALSR P+
Sbjct: 627 ----PRQARWALFFSRFNFHVT--FRPGSKNGKADALSRMFPAPE 665
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 28/165 (16%)
Query: 784 QALIELKWFYHNLTGFTPL--HPPVPRTF-MSTDASDVGWGAMVGNVS-----------V 829
QA ELK + + P+ HP R F + DAS+ GA++ +
Sbjct: 513 QAFTELKRSFTS----APILRHPDPARPFILEVDASEHAVGAVLSQRADFKNQLHPVAFF 568
Query: 830 QGVWTQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRS 887
+Q++R++ + +EL +++A L+ ANH +++ SD+K + Y+R LR
Sbjct: 569 SRKLSQSERNYDVGDRELLAIKSAFQEWRHLLEGANHPILVFSDHKN-LEYLRSAKRLR- 626
Query: 888 HALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD 932
+ L S+ N H+ F PG N ADALSR P+
Sbjct: 627 ----PRQARWALFFSRFNFHVT--FRPGSKNGKADALSRMFPAPE 665
>gi|391325581|ref|XP_003737311.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 1605
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN+ + + L + I L + + IDLS+AY IP+ ++ L +Y+
Sbjct: 526 LNTAIEDDNYPLPTAEDIFSTLNGGTWFSKIDLSEAYLQIPVDAESQKLLTINTPKGLYR 585
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
L FG+ +AP F +L + + L YLDD ++ S+ +N+I +
Sbjct: 586 MKRLPFGIKTAPSIFQRLMDTLVADLEG----TTAYLDDIIVTSKTKAEHENRILK 637
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 126/330 (38%), Gaps = 63/330 (19%)
Query: 619 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSS 678
LN+ + + L + I L + + IDLS+AY IP+ ++ L P +
Sbjct: 526 LNTAIEDDNYPLPTAEDIFSTLNGGTWFSKIDLSEAYLQIPVDAESQKLLTINTPKGL-- 583
Query: 679 FRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVLKNQILQTLQLLT 734
+R G+ + +RL + V L YLDD ++ S+ +N+IL+ L
Sbjct: 584 YRMKRLPFGIKTAPSIFQRLMDTLVADLEGTTAYLDDIIVTSKTKAEHENRILKLFGRLA 643
Query: 735 YLGWQVNLKKSQIIPSHRVDYLGI------------------------------------ 758
G + L K + S + YLG
Sbjct: 644 EFGLKAQLNKCSFMKSQ-IQYLGFILSKEGRKPDPERIQPIVALQKPTNISQLRAFLGMI 702
Query: 759 ----SWDTDLLQVRLPVDKI-----PPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRT 809
++ D+ ++R P++K+ P + + +A + K + T +P +P
Sbjct: 703 TFYNNFVPDMAELREPLNKLLKKNTPFVWNNDCEKAFEKAKTILQSDLLLTHFNPNLP-I 761
Query: 810 FMSTDASDVGWGAMV----GNVSVQGVW------TQAQRSWHINLKELFTVRAAISSNPS 859
+S DAS G G ++ + SV+ V T+ +R + KE + A+
Sbjct: 762 IVSADASSYGLGCVIFHRFPDGSVKAVQHAARSLTETERKYAQIEKEALALVFAVRKFHK 821
Query: 860 LVANHTVVLQSDNKTVIAYIRKQGGLRSHA 889
+ L +D+K +I ++ G+ +HA
Sbjct: 822 YLYGRKFTLNTDHKPLITIFKQGSGISAHA 851
>gi|154272636|ref|XP_001537170.1| hypothetical protein HCAG_07479 [Ajellomyces capsulatus NAm1]
gi|150415682|gb|EDN11026.1| hypothetical protein HCAG_07479 [Ajellomyces capsulatus NAm1]
Length = 1554
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 634 DGGLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYHRILIAAKDRW 693
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 694 KTAFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFSNSK 750
Query: 429 QDSVVLKNQIFQTLP-VNLSGNCSRS 453
Q+ V ++ + L NL S+S
Sbjct: 751 QEHKVHVTKVLERLERANLFAKLSKS 776
>gi|154285338|ref|XP_001543464.1| hypothetical protein HCAG_00510 [Ajellomyces capsulatus NAm1]
gi|150407105|gb|EDN02646.1| hypothetical protein HCAG_00510 [Ajellomyces capsulatus NAm1]
Length = 1487
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 567 DGGLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYHRILIAAKDRW 626
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 627 KTAFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFSNSK 683
Query: 429 QDSVVLKNQIFQTLP-VNLSGNCSRS 453
Q+ V ++ + L NL S+S
Sbjct: 684 QEHKVHVTKVLERLERANLFAKLSKS 709
>gi|401888649|gb|EJT52601.1| putative retrotransposon nucleocapsid protein [Trichosporon asahii
var. asahii CBS 2479]
Length = 2078
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + ++LN ++ + I L+ + + ++ DL++ Y IP R +
Sbjct: 1099 NGQWRMCVDYRALNKITVGDQYPVPRVFDILDSLEGSHWFSSFDLNKGYYQIPTTPRAAK 1158
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
L F + +Y+ + FG AP AF +L + +L R + CL Y+DD ++ S+
Sbjct: 1159 RLAFRTQDGLYEPLRMPFGAKGAPAAFQRLMD--TLLAEGRWLWCLAYIDDIIVYSK 1213
>gi|154284878|ref|XP_001543234.1| hypothetical protein HCAG_00280 [Ajellomyces capsulatus NAm1]
gi|150406875|gb|EDN02416.1| hypothetical protein HCAG_00280 [Ajellomyces capsulatus NAm1]
Length = 1584
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 664 DGGLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYHRILIAAKDRW 723
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 724 KTAFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFSNSK 780
Query: 429 QDSVVLKNQIFQTLP-VNLSGNCSRS 453
Q+ V ++ + L NL S+S
Sbjct: 781 QEHKVHVTKVLERLERANLFAKLSKS 806
>gi|154271288|ref|XP_001536497.1| hypothetical protein HCAG_08279 [Ajellomyces capsulatus NAm1]
gi|150409167|gb|EDN04617.1| hypothetical protein HCAG_08279 [Ajellomyces capsulatus NAm1]
Length = 1587
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 667 DGGLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYHRILIAAKDRW 726
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 727 KTAFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFSNSK 783
Query: 429 QDSVVLKNQIFQTLP-VNLSGNCSRS 453
Q+ V ++ + L NL S+S
Sbjct: 784 QEHKVHVTKVLERLERANLFAKLSKS 809
>gi|154271534|ref|XP_001536620.1| hypothetical protein HCAG_08402 [Ajellomyces capsulatus NAm1]
gi|150409290|gb|EDN04740.1| hypothetical protein HCAG_08402 [Ajellomyces capsulatus NAm1]
Length = 1584
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 664 DGGLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYHRILIAAKDRW 723
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 724 KTAFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFSNSK 780
Query: 429 QDSVVLKNQIFQTLP-VNLSGNCSRS 453
Q+ V ++ + L NL S+S
Sbjct: 781 QEHKVHVTKVLERLERANLFAKLSKS 806
>gi|308489628|ref|XP_003107007.1| hypothetical protein CRE_17270 [Caenorhabditis remanei]
gi|308252895|gb|EFO96847.1| hypothetical protein CRE_17270 [Caenorhabditis remanei]
Length = 1385
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + + L I L Y + IDL++AY I I + ++ LC +Y+
Sbjct: 547 LNDAIQQHQHPLPTADDIFSTLNGGKYFSQIDLAEAYLQIEIDEQAKQMLCINTHRGLYR 606
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
L FG+ SAP +F Q+ + + L GV YLDD ++ SV NQ +T+
Sbjct: 607 YNRLPFGVKSAPGSFQQIMDSMTSGL--DGV--AAYLDDIIITGS-SVAEHNQRLETV 659
>gi|221132915|ref|XP_002160449.1| PREDICTED: uncharacterized protein LOC100211417 [Hydra
magnipapillata]
Length = 384
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 344 LFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLS 403
L L + LA D+ +AY I I RR L +KG Y L FG SAPQ F + S
Sbjct: 143 LLLGEGCLLAKFDIQRAYRLIAIKEDERRLLVLNWKGCYYVDLALPFGARSAPQTFTRFS 202
Query: 404 NWVAVLLRERG-VRCLVY-LDDFLLAS 428
N + +L G ++ + + LDDFL+
Sbjct: 203 NVLEWILAYHGEIKYIQHSLDDFLICG 229
>gi|308486555|ref|XP_003105474.1| hypothetical protein CRE_22308 [Caenorhabditis remanei]
gi|308255440|gb|EFO99392.1| hypothetical protein CRE_22308 [Caenorhabditis remanei]
Length = 1279
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + + L I L Y + IDL++AY I I + ++ LC +Y+
Sbjct: 442 LNEAIQQHQHPLPTADDIFSTLNGGKYFSQIDLAEAYLQIEIDEQAKQMLCINTHRGLYR 501
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
L FG+ SAP +F Q+ + + L GV YLDD ++ SV NQ +T+
Sbjct: 502 YNRLPFGVKSAPGSFQQIMDSMTSGL--DGV--AAYLDDIIITGS-SVAEHNQRLKTV 554
>gi|308468863|ref|XP_003096672.1| hypothetical protein CRE_29108 [Caenorhabditis remanei]
gi|308241619|gb|EFO85571.1| hypothetical protein CRE_29108 [Caenorhabditis remanei]
Length = 1384
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + + L I L Y + IDL++AY I I + ++ LC +Y+
Sbjct: 547 LNDAIEQHQHPLPTADDIFSTLNGGKYFSQIDLAEAYLQIEIDEQAKQMLCINTHRGLYR 606
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
L FG+ SAP +F Q+ + + L GV YLDD ++ SV NQ +T+
Sbjct: 607 YNRLPFGVKSAPGSFQQIMDSMTSGL--DGV--AAYLDDIIITGS-SVAEHNQRLKTV 659
>gi|340381502|ref|XP_003389260.1| PREDICTED: hypothetical protein LOC100638994 [Amphimedon
queenslandica]
Length = 804
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 303 DRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYC 362
D + G N G+S ++ + + + N +I L L DL AY
Sbjct: 114 DLSYPAGGSVNDGIS--------HALSSVRYASVDNAVEIIRSLGPRAILTKFDLQDAYR 165
Query: 363 HIPI--ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLV- 419
+P+ A HR L +++G Y CL FGL SAP+ F+ LS+ +A + G+ V
Sbjct: 166 IVPVHPADHHR--LGIVWEGRTYVDRCLPFGLRSAPKIFSALSDALAWIFASFGLVSQVH 223
Query: 420 YLDDFLL 426
YLDDFL
Sbjct: 224 YLDDFLF 230
>gi|322695492|gb|EFY87299.1| pol protein [Metarhizium acridum CQMa 102]
Length = 868
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N L + + LN ++ L +I + K + T+DL AY I + H
Sbjct: 520 NGKLRPCIDYRHLNKITIKNRYPLPLMTEIRDKVGKAKWFTTLDLKGAYNLIRMKEGHEW 579
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
F Y+ + FGL +AP F ++ + +L ++ GV +VYLDD L+ S
Sbjct: 580 MTAFRTSRGHYEYLVMPFGLTNAPATFQRMID--TILRKQLGVFVVVYLDDILIYSDTLE 637
Query: 433 VLK---NQIFQTLPVN 445
K +++ QTL N
Sbjct: 638 EHKRHVHEVLQTLQDN 653
>gi|321451347|gb|EFX63032.1| hypothetical protein DAPPUDRAFT_269194 [Daphnia pulex]
Length = 490
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 701 RGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
+G+R ++YLDD L+ S+ + LT LG+ +N KS P R+DYLG+
Sbjct: 379 KGIRLIIYLDDILILSRSFSEALDHCAVVADTLTSLGFVINEAKSVKQPVQRIDYLGVVV 438
Query: 761 DTDLLQVRLPVDKI 774
D+ L LP +K+
Sbjct: 439 DSTKLSFALPKEKM 452
>gi|270014460|gb|EFA10908.1| hypothetical protein TcasGA2_TC001734 [Tribolium castaneum]
Length = 1600
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 38/249 (15%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
AN + + + + LN+ + L + K + T+DL Y I + R
Sbjct: 896 ANGTIRLCVDYRKLNAVTKPDVYPLPRLDDLLHATGKIGCITTLDLQAGYWQIQVEPGDR 955
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD- 430
F+ +Y+ T + FGL +AP +F +L + + + V L YLDD ++ S D
Sbjct: 956 DKTSFICPFGLYRFTRMPFGLRNAPASFQRLMDKFKTGIPD--VPILAYLDDLIIISPDG 1013
Query: 431 ------------SVVL--KNQIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNK 476
SV L + + PV + S R++ T A V
Sbjct: 1014 HTHIRHLRMLMHSVRLFSRGRAPTRRPVEYASRLLTSSERNYSTTEREALAIVW------ 1067
Query: 477 TVITYIRKQVGLRSNALLAETKKLLLIMS---------KLNIHIVPY-----FIPGKCNS 522
I+ R VG S ++ + + L MS + + + PY + PGK N+
Sbjct: 1068 -AISKFRGYVGENSTTVITDHQPLRWFMSLKTPTGRLARWALQLQPYNLVIEYTPGKANT 1126
Query: 523 LADALSRQA 531
+AD LSR A
Sbjct: 1127 IADFLSRPA 1135
>gi|301609771|ref|XP_002934433.1| PREDICTED: hypothetical protein LOC100494049 [Xenopus (Silurana)
tropicalis]
Length = 572
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 67 TDAS-DVGWGAMVGNVSVQGVWTQAQRSW-------HINLKELFTVRAAISSNPSLVANH 118
TDA+ G+GA W + SW ++ L ELF + AI L +N
Sbjct: 427 TDAAGSCGFGAYFSGSWCAEKWPE---SWAAGGLIRNLTLLELFPILVAIELWGHLFSNR 483
Query: 119 TVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 178
V+ +DN +V+ I Q S +LA + L+L + NIH +PG N +AD+L
Sbjct: 484 NVIFNTDNMSVVLAINNQTS-SSGPVLALLRHLVLRCLQFNIHFRAQHLPGVVNDIADSL 542
Query: 179 SR 180
SR
Sbjct: 543 SR 544
Score = 48.5 bits (114), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 813 TDAS-DVGWGAMVGNVSVQGVWTQAQRSW-------HINLKELFTVRAAISSNPSLVANH 864
TDA+ G+GA W + SW ++ L ELF + AI L +N
Sbjct: 427 TDAAGSCGFGAYFSGSWCAEKWPE---SWAAGGLIRNLTLLELFPILVAIELWGHLFSNR 483
Query: 865 TVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
V+ +DN +V+ I Q S +LA + L+L + NIH +PG N +AD+L
Sbjct: 484 NVIFNTDNMSVVLAINNQTS-SSGPVLALLRHLVLRCLQFNIHFRAQHLPGVVNDIADSL 542
Query: 925 SR 926
SR
Sbjct: 543 SR 544
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 463 LVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNS 522
L +N V+ +DN +V+ I Q S +LA + L+L + NIH +PG N
Sbjct: 479 LFSNRNVIFNTDNMSVVLAINNQTS-SSGPVLALLRHLVLRCLQFNIHFRAQHLPGVVND 537
Query: 523 LADALSR 529
+AD+LSR
Sbjct: 538 IADSLSR 544
>gi|308456302|ref|XP_003090602.1| hypothetical protein CRE_10709 [Caenorhabditis remanei]
gi|308262244|gb|EFP06197.1| hypothetical protein CRE_10709 [Caenorhabditis remanei]
Length = 2287
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 149/380 (39%), Gaps = 65/380 (17%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G +R V + + LN ++ + + N I + + D++Q + IP+ H+
Sbjct: 1798 NGEIRIVIDYRRLNLITRSRTYIMPNTIDICEEASRGKLFSVFDIAQGFHTIPMHEAHKE 1857
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
F M + +R + G T + + R+ ++Y+DD ++ S D
Sbjct: 1858 RTAFCCHMGVFQYRKMPMGLKGAPDTFQRAMAEVERQFSGTLILYVDDLIVVSNDEDQHI 1917
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLL----QVRLPVDKIPP--- 776
+ + QL+ +G ++ +KSQI + ++ +LG + + + + + + K P
Sbjct: 1918 THLEEFFQLMIKMGLKLKAEKSQIGRT-KISFLGFTIENNTITPNGEKTEAIQKFPTPQT 1976
Query: 777 -----------------LRD--------RLQTQALIELKWFYHNLTGFTPLH-----PPV 806
++D + TQ + KW F + PP+
Sbjct: 1977 LSDVKSFMGMAGYFRRFIKDFGIIGRPLTMLTQKNVLFKWGKEQEEAFQEIKKKLMSPPI 2036
Query: 807 PRT-------FMSTDASDVGWGAMV-----GNVSVQGVWTQAQRSWH-----INLKELFT 849
T + TDAS +G A++ G + V G ++ S I L+ L
Sbjct: 2037 LTTPKMDGDFELHTDASKIGIAAVLLQNQEGELKVIGYASRPTTSVENKYAPIELEALAI 2096
Query: 850 VRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIV 909
P + V+ +D++ + + + ++ S LL + I+ ++ I
Sbjct: 2097 TWGLTHFRPYVFGRKVKVV-TDHQPLKSLLHRKEKEMSGRLL----RHQAIIQMYDVEIA 2151
Query: 910 PYFIPGKCNSLADALSRQAL 929
+ PGK N LADALSRQ +
Sbjct: 2152 --YRPGKENPLADALSRQKI 2169
>gi|108709811|gb|ABF97606.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 702
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 70 NGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYNQLKIRIGDIP 129
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
F + +Y+ T +SFGL +AP F L N V ++ V +V++DD L+ S+D
Sbjct: 130 KTTFSTRYGLYEFTVMSFGLTNAPVYFMNLMNKVFTDYLDKFV--VVFIDDILIYSKDEE 187
Query: 433 VLKNQIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNA 492
+ L R H ++ + L+ T + K + +S+
Sbjct: 188 EHVKHLRLVL----------EKLRKHKLYAKFSKCEFWLKE--VTFLGQSLKYIFTQSDL 235
Query: 493 LLAETKKLLLIMS-KLNIHIVPYFIPGKCNSLADALSRQA 531
L + + L LI L +H + PGK N +ADALSR++
Sbjct: 236 NLRQRRWLELIKDYDLEVH----YHPGKANVVADALSRKS 271
>gi|44829171|tpg|DAA04499.1| TPA_exp: pol polyprotein [Schistosoma mansoni]
Length = 1382
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L I L + +T+DL+ Y + + + R+
Sbjct: 524 DSSLRLCIDYRRLNAITKRDSFPLPRIDAILDALSGACWFSTLDLASGYWQVEVRPQDRK 583
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L VL +CL+YLDD ++
Sbjct: 584 KTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQ--TVLQDTVPHKCLIYLDDIIV 635
>gi|326680285|ref|XP_002666897.2| PREDICTED: hypothetical protein LOC100333989 [Danio rerio]
Length = 1194
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN+ + + ++ + + Y+ T+DL + Y +P+ + R +
Sbjct: 819 LRLCLDFRKLNAVSKFDAYPMPRIDELVERIGRAKYITTLDLCKGYWQVPLEKTSREYTA 878
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +YQ T + FGL AP F +L + ++L++ YLDD ++ S
Sbjct: 879 FRTPVGLYQFTTMPFGLHGAPATFQRLMD---LILQDCEDCSAAYLDDVVIYS 928
>gi|384486663|gb|EIE78843.1| hypothetical protein RO3G_03548 [Rhizopus delemar RA 99-880]
Length = 419
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLS 652
DG +RPV NLK LN Y+ FK+ +++ L + NDYL +IDLS
Sbjct: 371 DGGIRPVCNLKRLNQYLDAPHFKMETIREVALMINPNDYLVSIDLS 416
>gi|391335912|ref|XP_003742330.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 745
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + + L N ++I N + +DL+ AY +P+ +R ++Q
Sbjct: 353 LNEALVDIEHPLPNMEEIMTKFSGNRVFSQLDLADAYLQLPLDENSQRVTTITTHRGLFQ 412
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
T L FGL +AP F + VL+ GV LVYLDD L+ + D+
Sbjct: 413 YTRLVFGLKTAPSIFQKTIE--QVLMGMEGV--LVYLDDILVMAPDT 455
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 103/252 (40%), Gaps = 24/252 (9%)
Query: 606 GDGTMRPVFNLKS-LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 664
+G++R + + LN + + L N ++I N + +DL+ AY +P+
Sbjct: 339 ANGSIRVCADYSTGLNEALVDIEHPLPNMEEIMTKFSGNRVFSQLDLADAYLQLPLDENS 398
Query: 665 RRFLCFLIPMDMSSFRPSLSSPGVCPTI--KLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
+R + + + P+I K ++ LVYLDD L+ + D
Sbjct: 399 QRVTTITTHRGLFQYTRLVFGLKTAPSIFQKTIEQVLMGMEGVLVYLDDILVMAPDTERH 458
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQV---RLPVDK-IPPL 777
++ + LQ L G+ + L+K +P +V YLG+ + ++ R+ V K + P
Sbjct: 459 DQRLNRVLQRLQDSGFHLKLEKCYFHVP--KVKYLGMVVSSRGIEADPSRISVIKELRPP 516
Query: 778 RDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ 837
R++ + ++L+ + +Y H P+ + D V+ VWT
Sbjct: 517 RNQKEVRSLLGMVNYYGKFVDNMHRHKPLLEALLKKD--------------VRFVWTPEH 562
Query: 838 RSWHINLKELFT 849
+KE+ T
Sbjct: 563 EKALAKIKEILT 574
>gi|432863505|ref|XP_004070100.1| PREDICTED: uncharacterized protein LOC101166792 [Oryzias latipes]
Length = 1023
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
++ +SY T + LI L K +L TIDL + Y +P+ R + F
Sbjct: 773 SVSKFDSYPTPRIDNLIE------CLGKAKFLTTIDLCKGYWQVPLTERSQELTAFRTPW 826
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
++Q T L FGL AP F +L + V L++ YLDD ++ S
Sbjct: 827 GLFQFTVLPFGLHGAPATFQRLMDQVLGGLKDCAC---AYLDDIVVYS 871
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 12/199 (6%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + LNS + + L K +L TIDL + Y +P+ R +
Sbjct: 759 DGTIRFCIDFRYLNSVSKFDSYPTPRIDNLIECLGKAKFLTTIDLCKGYWQVPLTERSQE 818
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER---GVR--CLVYLDDFLLASQDPIV 721
F P + F ++ G+ +RL ++ G++ YLDD ++ S
Sbjct: 819 LTAFRTPWGLFQF--TVLPFGLHGAPATFQRLMDQVLGGLKDCACAYLDDIVVYSATWEE 876
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRL----PVDKIPPL 777
+ + L+ L G +N K +YLG + L++ ++ ++ P
Sbjct: 877 HLRHLKKVLECLHAAGLTINPAKCAFA-RRETEYLGYTIGGGLIKPQVNKVKAIESCPLP 935
Query: 778 RDRLQTQALIELKWFYHNL 796
+ R Q ++ + L FYH
Sbjct: 936 QTRKQLRSFLGLAGFYHKF 954
>gi|50880256|emb|CAF25164.1| pseudo [Avian endogenous retrovirus EAV-HP]
Length = 858
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 51/254 (20%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLAT-IDLSQAYCHIPIARRHRR 666
G R + +L+++NS + F ++ L ++ T IDL + IP+A + R
Sbjct: 72 GAFRLLHDLRAVNSQLI--PFGVVQQGAPVLSAVPEEWEVTAIDLKDCFFSIPLAEQDRE 129
Query: 667 FLCFLIPMDMSSFRPS------------LSSPGVCPTIKLGRRL-----RERGVRCLV-- 707
F +P+ + RP+ SP +C + +G+ L C++
Sbjct: 130 AFAFTVPVSNNQ-RPTQRYQWRVLPQGMACSPTICQMV-VGKILGPLHHTSEASECIILH 187
Query: 708 YLDDFLLASQDPIVLKNQILQT--LQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLL 765
Y+DD LLA+ P + + Q L+T + LLT G+ V+ +K Q V +LG +D +
Sbjct: 188 YMDDLLLAA--PTLARLQDLETCVISLLTKAGFTVSSEKIQR--GSGVQFLGYKFDEGTV 243
Query: 766 QVRLPVDKIPPLRDRLQTQALI-ELKW--------------FYHNLTGFTPLHPPVPRTF 810
+ V+ P +R Q L+ L+W FY L G P PRTF
Sbjct: 244 R-PTGVNITPRIRTLWDVQKLVGALQWIRGALGIPPRLMQPFYDQLKGSDPRE---PRTF 299
Query: 811 MSTDASDVGWGAMV 824
+ D S+ W +V
Sbjct: 300 -TPDMSE-AWDEIV 311
>gi|391331472|ref|XP_003740170.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 756
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + + L N ++I N + +DL+ AY +P+ +R ++Q
Sbjct: 527 LNEALVDIEHPLPNMEEIMTKFSGNRVFSQLDLADAYLQLPLDENSQRVTTITTHRGLFQ 586
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
T L FGL +AP F + VL+ GV LVYLDD L+ + D+
Sbjct: 587 YTRLVFGLKTAPSIFQK--TIEQVLMGMEGV--LVYLDDILVMAPDT 629
>gi|50880251|emb|CAF25156.1| reverse transcriptase/integrase [Avian endogenous retrovirus
EAV-HP]
Length = 858
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 51/254 (20%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLAT-IDLSQAYCHIPIARRHRR 666
G R + +L+++NS + F ++ L ++ T IDL + IP+A + R
Sbjct: 72 GAFRLLHDLRAVNSQLI--PFGVVQQGAPVLSAVPEEWEVTAIDLKDCFFSIPLAEQDRE 129
Query: 667 FLCFLIPMDMSSFRPS------------LSSPGVCPTIKLGRRL-----RERGVRCLV-- 707
F +P+ + RP+ SP +C + +G+ L C++
Sbjct: 130 AFAFTVPVSNNQ-RPTQRYQWRVLPQGMACSPTICQMV-VGKILGPLHHTSEASECIILH 187
Query: 708 YLDDFLLASQDPIVLKNQILQT--LQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLL 765
Y+DD LLA+ P + + Q L+T + LLT G+ V+ +K Q V +LG +D +
Sbjct: 188 YMDDLLLAA--PTLARLQDLETCVISLLTKAGFTVSSEKIQR--GSGVQFLGYKFDEGTV 243
Query: 766 QVRLPVDKIPPLRDRLQTQALI-ELKW--------------FYHNLTGFTPLHPPVPRTF 810
+ V+ P +R Q L+ L+W FY L G P PRTF
Sbjct: 244 R-PTGVNITPRIRTLWDVQKLVGALQWIRGALGIPPRLMQPFYDQLKGSDPRE---PRTF 299
Query: 811 MSTDASDVGWGAMV 824
+ D S+ W +V
Sbjct: 300 -TPDMSE-AWDEIV 311
>gi|50838942|gb|AAT81703.1| putative reverse transcriptase, 3'-partial [Oryza sativa Japonica
Group]
Length = 672
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 19/220 (8%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 70 NGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYNQLKIRIGDIP 129
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
F + +Y+ T +SFGL +AP F L N V ++ V +V++DD L+ S+D
Sbjct: 130 KTTFSTRYGLYEFTVMSFGLTNAPVYFMNLMNKVFTDYLDKFV--VVFIDDILIYSKDEE 187
Query: 433 VLKNQIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNA 492
+ L R H ++ + L+ T + K + +S+
Sbjct: 188 EHVKHLRLVL----------EKLRKHKLYAKFSKCEFWLKE--VTFLGQSLKYIFTQSDL 235
Query: 493 LLAETKKLLLIMS-KLNIHIVPYFIPGKCNSLADALSRQA 531
L + + L LI L +H + PGK N +ADALSR++
Sbjct: 236 NLRQRRWLELIKDYDLEVH----YHPGKANVVADALSRKS 271
>gi|340383518|ref|XP_003390264.1| PREDICTED: hypothetical protein LOC100635540 [Amphimedon
queenslandica]
Length = 1253
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
+ +A IDL AY +P+ L ++G Y L FGL SAP F+ +++ +A
Sbjct: 571 RGALMAKIDLKSAYRMVPVRPEDSLLLGIQWEGITYADFALPFGLRSAPILFSAVADGLA 630
Query: 408 VLLRERGVRCLV-YLDDFLLAS-QDSVVLKNQIFQTLPV 444
L GV + YLDDF S+V + + LP+
Sbjct: 631 WALFRSGVEFSIHYLDDFFFCGPPSSLVCRRAMEIALPL 669
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 124/349 (35%), Gaps = 84/349 (24%)
Query: 642 KNDYLATIDLSQAYCHIPIARRHRRFLC----------FLIPMDMSSFRPSLSSPGVCPT 691
+ +A IDL AY +P+ L F +P + S P L S
Sbjct: 571 RGALMAKIDLKSAYRMVPVRPEDSLLLGIQWEGITYADFALPFGLRS-APILFS---AVA 626
Query: 692 IKLGRRLRERGVRCLV-YLDDFLLASQ-DPIVLKNQILQTLQLLTYLGWQVNLKKSQIIP 749
L L GV + YLDDF +V + + L L LG V +K + P
Sbjct: 627 DGLAWALFRSGVEFSIHYLDDFFFCGPPSSLVCRRAMEIALPLCQKLGLPVAPEKVEG-P 685
Query: 750 SHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQT-------------------------- 783
+ + +LGI ++D + + LP +K+ L+ RL
Sbjct: 686 ATSLTFLGIQLNSDAMSLSLPQEKLASLKLRLSAWVNAQAATKQELQELLGHLNHAAAVV 745
Query: 784 -------QALIE---------------------LKW---FYHNLTGFTPLHPPVPRTFMS 812
+A+IE +KW F + G + L P P T++
Sbjct: 746 RPGRSFVRAIIEAMKRPRLPHQKTRLDANCKADIKWWSLFVADWNGISALPPSCPVTWVI 805
Query: 813 TDASDVGWGAMVGNVSVQGVWTQAQ--RSW---HINLKELFTVRAAISSNPSLVANHTVV 867
+DAS WG + G W Q SW +I KEL V A + A V+
Sbjct: 806 SDASG-SWGCGAFD-QYHGSWFQLPWPASWAEVNIAAKELLPVVIAAAVWGRRWAGQRVL 863
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI-MSKLNIHIVPYFIPG 915
SDN V+A + + H +LA K L +K + IPG
Sbjct: 864 FLSDNTAVVAALSSRSAC--HPILAHLLKCLFFWEAKFDFEHSADHIPG 910
>gi|7522108|pir||T29097 pro-pol-dUTPase polyprotein - murine endogenous retrovirus ERV-L
(fragment)
gi|2065210|emb|CAA73251.1| Pro-Pol-dUTPase polyprotein [Mus musculus]
Length = 1182
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 22/169 (13%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKND----YLATIDLSQAYCHIPIAR 662
DG+ R + + LN VT + + + L Q N + A IDL+ A+ +P+ +
Sbjct: 202 DGSWRMTVDYRKLNQVVTPIAAAVPD--VVSLLEQINTSPGTWYAAIDLANAFFSVPVHK 259
Query: 663 RHRRFLCFLIPMDMSSF----RPSLSSPGVCPTI---KLGRRLRERGVRCLVYLDDFLLA 715
H++ + F +F + ++SP +C + L R + + + Y+DD +L
Sbjct: 260 DHQKQIAFSWQGQQYTFTVLPQVYINSPALCHNLVRRDLDRLDLPQSITLVHYIDDIMLV 319
Query: 716 SQDPIVLKNQILQTLQ-LLTYL---GWQVNLKKSQIIPSHRVDYLGISW 760
+ ++ TL L+T++ GW++N K Q PS V +LG+ W
Sbjct: 320 GPS----EQEVATTLDSLVTHMRIRGWEINPTKIQ-GPSTSVKFLGVQW 363
>gi|327260600|ref|XP_003215122.1| PREDICTED: hypothetical protein LOC100563843 [Anolis carolinensis]
Length = 1667
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 736 LGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHN 795
LG+ +N +KS ++P+ R+ Y+ + D + LP D+ +R ++I + H
Sbjct: 772 LGFMINFEKSNLVPTQRIHYISTTIDLVEEKAFLPEDRFRVIR------SIINVVCAKHY 825
Query: 796 LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQR-------SWHI------ 842
A + + +++G+++ T R W +
Sbjct: 826 -------------------APALAFQSLLGHMASTTAGTPFTRFRMHPLQCWFLRMFDPP 866
Query: 843 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMS 902
+L+ T+ + + ++V+ + L +DN TV Y+ KQGG LL ++
Sbjct: 867 HLRPPQTIEKTLRAFKTVVSGQMIQLLTDNSTVKFYVNKQGGTHLCNLLCLMLEIWEWCI 926
Query: 903 KLNIHIVPYFIPGKCNSLADALSRQA 928
+ I + +PG+ NSLA+ALSR
Sbjct: 927 RRWIQLTAVHLPGEENSLANALSRSG 952
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 103 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 162
T+ + + ++V+ + L +DN TV Y+ KQGG LL ++ + I +
Sbjct: 873 TIEKTLRAFKTVVSGQMIQLLTDNSTVKFYVNKQGGTHLCNLLCLMLEIWEWCIRRWIQL 932
Query: 163 VPYFIPGKCNSLADALSRQA 182
+PG+ NSLA+ALSR
Sbjct: 933 TAVHLPGEENSLANALSRSG 952
>gi|339256020|ref|XP_003370753.1| retrovirus-related Pol polyprotein from transposon 412 [Trichinella
spiralis]
gi|316965701|gb|EFV50381.1| retrovirus-related Pol polyprotein from transposon 412 [Trichinella
spiralis]
Length = 742
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ +T+DL+ Y + +A + F +YQ + FGL +AP F +L VL
Sbjct: 32 WFSTLDLASGYWQVEVADEDKEKTAFTTPFGLYQFRVMPFGLCNAPATFQRLME--TVLC 89
Query: 411 RERGVRCLVYLDDFLLASQDSV 432
C+VYLDD ++ S+D+
Sbjct: 90 GLHWTTCMVYLDDIIVFSKDAT 111
>gi|84801|pir||S08405 hypothetical protein 2 - silkworm transposon mag
Length = 1178
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 312 ANTGLSIMFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
A+ GL I + K +LN + +F + + + L N + +DLSQAY I ++ R
Sbjct: 287 ADGGLRICADYKVTLNKVLAIDRFPVPKMEDLFSNLSGNKFFTKLDLSQAYNQIVLSERS 346
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
+ +++ + L +GLAS+P F +L V + + +V+ DD L+ +QD
Sbjct: 347 SEYTVINTHRGLFKYSRLVYGLASSPGIFQKL----MVNMFKNVPNVVVFYDDILIRNQD 402
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 606 GDGTMRPVFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 664
DG +R + K +LN + +F + + + L N + +DLSQAY I ++ R
Sbjct: 287 ADGGLRICADYKVTLNKVLAIDRFPVPKMEDLFSNLSGNKFFTKLDLSQAYNQIVLSERS 346
Query: 665 RRFLCFLIPMDMSSFRPS------LSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQD 718
+ +I F+ S SSPG+ KL + + +V+ DD L+ +QD
Sbjct: 347 SEYT--VINTHRGLFKYSRLVYGLASSPGIFQ--KLMVNMFKNVPNVVVFYDDILIRNQD 402
Query: 719 PIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
I + L +L G ++ K + + + V YLG D + VR+ +K+ +
Sbjct: 403 LDSHLKSIKEVLDILERYGLKIKRSKCEFMVTE-VRYLGFIIDQN--GVRVDPEKVKSIA 459
Query: 779 DRLQTQALIELKWF 792
+ ELK F
Sbjct: 460 TMPHPNNVTELKSF 473
>gi|77552016|gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + I + +SLN K+ L + L+ +TIDL Y + I
Sbjct: 930 DGSMRICVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSTIDLRSGYHQLKIRTEDIP 989
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 990 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 1046
>gi|38345974|emb|CAE04057.2| OSJNBb0062B06.15 [Oryza sativa Japonica Group]
gi|116311112|emb|CAH68039.1| OSIGBa0139N19-OSIGBa0137L10.8 [Oryza sativa Indica Group]
Length = 849
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 176 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 235
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
+Y+ T +SFGL +AP F L N V + YLD F++ D +++ ++ +
Sbjct: 236 RLYEFTVMSFGLTNAPAFFMNLMNKV----------FMEYLDKFVVVFIDGILVYSRSEE 285
Query: 441 TLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKL 500
+L + H ++ ++ + L + ++ + + A+ ET++
Sbjct: 286 DHQQHLRLVLGKLW--EHQLYAKLSKCELWLSE-----VKFLGHVISAKGVAVDPETRRW 338
Query: 501 LLIMSKLNIHIVPYFIPGKCNSLADALSRQA 531
L ++ ++ I ++ PGK N +ADALSR++
Sbjct: 339 LELIKDYDVGI--HYHPGKANVVADALSRKS 367
>gi|115676946|ref|XP_001186732.1| PREDICTED: uncharacterized protein LOC754701 [Strongylocentrotus
purpuratus]
Length = 1291
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN T + + ++I L + Y IDL++ Y +P+ + F+
Sbjct: 926 DYRKLNQVTVTDAEPIPDQEEIFAKLSRAKYFTKIDLTKGYWQVPLTEEAKELTAFVTPD 985
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE-RGVRCLVYLDDFLL 426
+YQ + FGL +AP +F+++ + VLLR GV ++DD L+
Sbjct: 986 GLYQFRSMPFGLVNAPASFSRI---MRVLLRGLHGVDN--FIDDILI 1027
>gi|154275790|ref|XP_001538740.1| hypothetical protein HCAG_06345 [Ajellomyces capsulatus NAm1]
gi|150413813|gb|EDN09178.1| hypothetical protein HCAG_06345 [Ajellomyces capsulatus NAm1]
Length = 1515
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 547 DGGLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYHRILIAAKDRW 606
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 607 KTAFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFSNSK 663
Query: 432 VVLKNQIFQTL 442
K + + L
Sbjct: 664 QEHKVHVTKVL 674
>gi|154282825|ref|XP_001542208.1| hypothetical protein HCAG_02379 [Ajellomyces capsulatus NAm1]
gi|150410388|gb|EDN05776.1| hypothetical protein HCAG_02379 [Ajellomyces capsulatus NAm1]
Length = 1263
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 650 DGGLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYPRILIAAKDRW 709
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 710 KTAFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFSNSK 766
Query: 432 VVLKNQIFQTL 442
K + + L
Sbjct: 767 QEHKVHVTKVL 777
>gi|406699121|gb|EKD02338.1| polyprotein [Trichosporon asahii var. asahii CBS 8904]
Length = 1322
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
+L++LN + + I L+ + ++ DL++ Y IP +R RR L F +
Sbjct: 335 IDLRALNRVTIGDSYPVPRVLDILESLEGAQWFSSFDLNKGYFQIPNTKRARRRLAFRTQ 394
Query: 380 GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIF 439
+++ + FG AP F +L + +L R + + Y+DD ++ S+ +
Sbjct: 395 DGLWEPLRMPFGAKGAPATFQRLMDL--LLAEGRWLWAMAYIDDIIVYSKSFDEHLKHVS 452
Query: 440 QTLPVNLSGNCSRSGRRSH 458
TL + G + +SH
Sbjct: 453 WTLQRMIDGGLTLGANKSH 471
>gi|125826203|ref|XP_001339254.1| PREDICTED: hypothetical protein LOC798826 [Danio rerio]
Length = 1490
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 20/178 (11%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L K YL T+DLS+ Y IP+ R R F ++Q L FGL AP F +L +
Sbjct: 1135 LGKAVYLTTLDLSKGYWQIPLTERARPLTAFRTPWGLFQFRFLPFGLHGAPATFQRLMDQ 1194
Query: 406 VAVLLRERGVRCLVYLDDFLLAS---QDSVVLKNQIFQTLPVNLSGNCSRSGRRSHPTHS 462
V L YLDD ++ S ++ + +++FQ L R+G ++P
Sbjct: 1195 VLQGL----TFAAAYLDDIIIYSTTWEEHMQHLHEVFQRL--------QRAGLTANPAKC 1242
Query: 463 LVANHTVVLQS---DNKTVITYIRKQVGLRSNALLAETKKL--LLIMSKLNIHIVPYF 515
+A N V I+K L L K+L L M+ +P F
Sbjct: 1243 AIARKEAEYLGFVIGNGVVRPQIKKIQALEECPLPQTRKELRSFLGMAGFYNRFIPNF 1300
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 145/392 (36%), Gaps = 92/392 (23%)
Query: 607 DGTMRPVFNLKSLNS------YVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPI 660
DG +R + + LNS Y T + LI+ L K YL T+DLS+ Y IP+
Sbjct: 1102 DGNIRFCIDFRYLNSVSQFDCYPTPRIDSLIDR------LGKAVYLTTLDLSKGYWQIPL 1155
Query: 661 ARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLV----YLDDFLLAS 716
R R F P + FR G+ +RL ++ ++ L YLDD ++ S
Sbjct: 1156 TERARPLTAFRTPWGLFQFR--FLPFGLHGAPATFQRLMDQVLQGLTFAAAYLDDIIIYS 1213
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPP 776
+ + Q L G N K I +YLG + VR + KI
Sbjct: 1214 TTWEEHMQHLHEVFQRLQRAGLTANPAKCAIA-RKEAEYLGFVIGNGV--VRPQIKKIQA 1270
Query: 777 LRD------RLQTQALIELKWFYHN----------------------------------- 795
L + R + ++ + + FY+
Sbjct: 1271 LEECPLPQTRKELRSFLGMAGFYNRFIPNFSSRAATLTDMVGVRCPNQCQWTEERIAAFK 1330
Query: 796 -----LTGFTPLH-PPVPRTFM-STDASDVGWGAMVGNVS----------VQGVWTQAQR 838
LT T L+ P + F+ TDAS+ G GA++ S + ++ + R
Sbjct: 1331 DIQTALTTNTVLYNPDFTKEFIVQTDASERGLGAVLLQGSPGERRPVVFISRKLFPRETR 1390
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTV--IAYIRKQGGLRSHALLAETKK 896
I KE V+ A+ S + +L++D+K + + +R G + LA
Sbjct: 1391 YSTIE-KECLAVKWALDSLRYYLLGREFILETDHKALQWLERMRDTNGRITRWYLA---- 1445
Query: 897 LLLIMSKLNIHIVPYFIPGKCNSLADALSRQA 928
M + + +PGK N AD LSR A
Sbjct: 1446 ----MQPFRFKV--HHVPGKANVTADYLSRCA 1471
>gi|322699332|gb|EFY91094.1| pol protein [Metarhizium acridum CQMa 102]
Length = 874
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 327 SYVTTKKFKLINHQKIPLFLQKND------YLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
Y K + N +PL + D + T+DL AY I + H F
Sbjct: 246 DYRLLNKITIKNRYPLPLMTEIRDKVGKAKWFTTLDLKGAYNLIRMKEGHEWMTAFRTSR 305
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK---NQ 437
Y+ + FGL +AP F ++ + +L ++ GV +VYLDD L+ S K ++
Sbjct: 306 GHYEYLVMPFGLTNAPATFQRMID--TILRKQLGVFVVVYLDDILIYSDTLEEHKRHVHE 363
Query: 438 IFQTLPVN 445
+ QTL N
Sbjct: 364 VLQTLQDN 371
>gi|189527795|ref|XP_001920303.1| PREDICTED: hypothetical protein LOC793061 [Danio rerio]
Length = 1490
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 20/178 (11%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L K YL T+DLS+ Y IP+ R R F ++Q L FGL AP F +L +
Sbjct: 1135 LGKAVYLTTLDLSKGYWQIPLTERARPLTAFRTPWGLFQFRFLPFGLHGAPATFQRLMDQ 1194
Query: 406 VAVLLRERGVRCLVYLDDFLLAS---QDSVVLKNQIFQTLPVNLSGNCSRSGRRSHPTHS 462
V L YLDD ++ S ++ + +++FQ L R+G ++P
Sbjct: 1195 VLQGL----TFAAAYLDDIIIYSTTWEEHMQHLHEVFQRL--------QRAGLTANPAKC 1242
Query: 463 LVANHTVVLQS---DNKTVITYIRKQVGLRSNALLAETKKL--LLIMSKLNIHIVPYF 515
+A N V I+K L L K+L L M+ +P F
Sbjct: 1243 AIARKEAEYLGFVIGNGVVRPQIKKIQALEECPLPQTRKELRSFLGMAGFYNRFIPNF 1300
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 143/392 (36%), Gaps = 92/392 (23%)
Query: 607 DGTMRPVFNLKSLNS------YVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPI 660
DG +R + + LNS Y T + LI+ L K YL T+DLS+ Y IP+
Sbjct: 1102 DGNIRFCIDFRYLNSVSQFDCYPTPRIDSLIDR------LGKAVYLTTLDLSKGYWQIPL 1155
Query: 661 ARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLV----YLDDFLLAS 716
R R F P + FR G+ +RL ++ ++ L YLDD ++ S
Sbjct: 1156 TERARPLTAFRTPWGLFQFR--FLPFGLHGAPATFQRLMDQVLQGLTFAAAYLDDIIIYS 1213
Query: 717 QDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPP 776
+ + Q L G N K I +YLG + VR + KI
Sbjct: 1214 TTWEEHMQHLHEVFQRLQRAGLTANPAKCAIA-RKEAEYLGFVIGNGV--VRPQIKKIQA 1270
Query: 777 LRD------RLQTQALIELKWFYHN----------------------------------- 795
L + R + ++ + + FY+
Sbjct: 1271 LEECPLPQTRKELRSFLGMAGFYNRFIPNFSSRAATLTDMVGVRCPNQCQWTEERMAAFK 1330
Query: 796 -----LTGFTPLHPP--VPRTFMSTDASDVGWGAMVGNVS----------VQGVWTQAQR 838
LT T L+ P + TDAS+ G GA++ S + ++ + R
Sbjct: 1331 DIQTALTTNTVLYNPDFTKEFIVQTDASERGLGAVLLQGSPGERRPVVFISRKLFPRETR 1390
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTV--IAYIRKQGGLRSHALLAETKK 896
I KE V+ A+ S + +L++D+K + + +R G + LA
Sbjct: 1391 YSTIE-KECLAVKWALDSLRYYLLGREFILETDHKALQWLERMRDTNGRITRWYLA---- 1445
Query: 897 LLLIMSKLNIHIVPYFIPGKCNSLADALSRQA 928
M + + +PGK N AD LSR A
Sbjct: 1446 ----MQPFRFKV--HHVPGKANVTADYLSRCA 1471
>gi|308460254|ref|XP_003092433.1| hypothetical protein CRE_03477 [Caenorhabditis remanei]
gi|308253227|gb|EFO97179.1| hypothetical protein CRE_03477 [Caenorhabditis remanei]
Length = 1753
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 147/379 (38%), Gaps = 65/379 (17%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+G +R V + + LN ++ + + N + + + D++Q + IP+ H+
Sbjct: 860 ANGEIRIVIDYRRLNLITRSRTYIMPNTIDVTEEASRGKLFSVFDIAQGFHTIPMHEAHK 919
Query: 666 RFLCFLIPMDMSSFR-PSLSSPGVCPTIKLGRRLRERGVR--CLVYLDDFLLASQDPIVL 722
F M + +R + G T + E+ ++Y+DD ++ S+D
Sbjct: 920 ERTAFCCHMGVFQYRYMPMGLKGAPDTFQRAMAEVEKQFTGTMILYVDDLIVVSRDEEEH 979
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ----VRLPVDKIPP-- 776
+ + QL+ +G ++ +KSQI + ++ +LG + + +Q + K P
Sbjct: 980 LRNLEEFFQLMINMGLKLKAEKSQIGRT-KISFLGFVIENNTIQPSGEKTEAIRKFPTPT 1038
Query: 777 ------------------LRD--------RLQTQALIELKWFYHNLTGFTP-----LHPP 805
++D TQ +E KW F + PP
Sbjct: 1039 TLSEVKSFLGMSGYFRRFIKDYAIIVKPLTTLTQKDVEFKWGEEQEKAFEEVKQRLISPP 1098
Query: 806 V---PRT----FMSTDASDVGWGAMV-----GNVSVQGVWTQ-----AQRSWHINLKELF 848
+ PR M TDAS +G A++ + V ++ QR I + L
Sbjct: 1099 ILTTPRMDGDFEMHTDASKIGIAAVLLQKQDDELKVIAYASRPTTPVEQRYAAIESEALA 1158
Query: 849 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
P + V+ +D++ + + + ++ S LL + I+ ++ I
Sbjct: 1159 ITWGLTHYRPYIFGKKVKVV-TDHQPLKSLLHRKEKEMSGRLL----RHQAIIQMYDVEI 1213
Query: 909 VPYFIPGKCNSLADALSRQ 927
V + PGK N LADALSRQ
Sbjct: 1214 V--YRPGKENPLADALSRQ 1230
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
AN + I+ + + LN ++ + + N + + + D++Q + IP+ H+
Sbjct: 860 ANGEIRIVIDYRRLNLITRSRTYIMPNTIDVTEEASRGKLFSVFDIAQGFHTIPMHEAHK 919
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F V+Q + GL AP F + +A + ++ ++Y+DD ++ S+D
Sbjct: 920 ERTAFCCHMGVFQYRYMPMGLKGAPDTFQRA---MAEVEKQFTGTMILYVDDLIVVSRDE 976
Query: 432 VV-LKN-----QIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKT 477
L+N Q+ + + L S+ GR V + + S KT
Sbjct: 977 EEHLRNLEEFFQLMINMGLKLKAEKSQIGRTKISFLGFVIENNTIQPSGEKT 1028
>gi|154274776|ref|XP_001538239.1| hypothetical protein HCAG_05844 [Ajellomyces capsulatus NAm1]
gi|150414679|gb|EDN10041.1| hypothetical protein HCAG_05844 [Ajellomyces capsulatus NAm1]
Length = 1172
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
GL + + + LN ++ L ++ L K +DL AY I IA + R
Sbjct: 549 GLRLCVDYRGLNRITIKNRYPLPLISELLDRLSKAKVFTKLDLRDAYHRILIAAKDRWKT 608
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F + ++ + FGLA+AP F A ++N ++ LL + C+VYLDD L+ S
Sbjct: 609 AFRTRYGHFEYVVMPFGLANAPATFQAYINNALSDLL---DICCVVYLDDILIFS 660
>gi|350645839|emb|CCD59478.1| hypothetical protein Smp_178530 [Schistosoma mansoni]
Length = 1382
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L I L + +T+DL+ Y + + + R+
Sbjct: 524 DSSLRLCIDYRRLNAITKRDSFPLPRIDAILDALSGACWFSTLDLASGYWQVEVRPQDRK 583
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L VL +CL+YLDD ++
Sbjct: 584 KTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQ--TVLQDIVPHKCLIYLDDIIV 635
>gi|307174707|gb|EFN65085.1| Uncharacterized protein F44E2.2 [Camponotus floridanus]
Length = 448
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGT-VYQRTCLSFGLASAPQAFAQLSN 404
L+ YL+T+DL Y +P+ R F G +YQ T + FGL SAP F +L +
Sbjct: 275 LRGARYLSTLDLKDGYWQVPLTPGSRPVTAFTIPGKGLYQFTVMPFGLHSAPATFQRLLD 334
Query: 405 WVAVLLRERGVRCLVYLDDFLLASQ 429
+VL E VYLDD ++ S+
Sbjct: 335 --SVLGPELEPHVFVYLDDIIIISR 357
>gi|301626399|ref|XP_002942387.1| PREDICTED: hypothetical protein LOC100493142 [Xenopus (Silurana)
tropicalis]
Length = 2034
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + ++LN ++ L ++ L + + +DL Y +P+A +
Sbjct: 814 DGSIRLCVDYRTLNRRTVPDQYTLPRIEETLEALNGSKWFTVMDLRSGYYQVPMASEDQE 873
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGV------RCLVYLDDFLLASQDPI 720
F+ P+ F + G+C +RL E+ + CLVYLDD ++
Sbjct: 874 KTAFICPLGFYQF--TRMPQGICGAPATFQRLMEKMLGDLSPRECLVYLDDIIVFGTTLE 931
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGIS 759
+ +++ + L G ++++ K + SHR + +S
Sbjct: 932 EHEQRLMNVIDRLIAEGLKLSIDKYGV--SHRDHFQYVS 968
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ + + ++LN ++ L ++ L + + +DL Y +P+A +
Sbjct: 817 IRLCVDYRTLNRRTVPDQYTLPRIEETLEALNGSKWFTVMDLRSGYYQVPMASEDQEKTA 876
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ YQ T + G+ AP F +L + L R CLVYLDD ++
Sbjct: 877 FICPLGFYQFTRMPQGICGAPATFQRLMEKMLGDLSPR--ECLVYLDDIIV 925
>gi|115676936|ref|XP_785557.2| PREDICTED: uncharacterized protein LOC580404 [Strongylocentrotus
purpuratus]
Length = 1463
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN T + + ++I L + Y IDL++ Y +P+ + F+
Sbjct: 1098 DYRKLNQVTVTDAEPIPDQEEIFAKLSRAKYFTKIDLTKGYWQVPLTEEAKELTAFVTPD 1157
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE-RGVRCLVYLDDFLL 426
+YQ + FGL +AP +F+++ + VLLR GV ++DD L+
Sbjct: 1158 GLYQFRSMPFGLVNAPASFSRI---MRVLLRGLHGVDN--FIDDILI 1199
>gi|401889152|gb|EJT53092.1| hypothetical protein A1Q1_00099 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1554
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ +L++LN + + I L+ + ++ DL++ Y IP +R RR L F
Sbjct: 565 MCIDLRALNRVTIGDSYPVPRVLDILESLEGAQWFSSFDLNKGYFQIPNTKRARRRLAFR 624
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
+ +++ + FG AP F +L + +L R + + Y+DD ++ S+
Sbjct: 625 TQDGLWEPLRMPFGAKGAPATFQRLMDL--LLAEGRWLWAMAYIDDIIVYSKSFDEHLKH 682
Query: 438 IFQTLPVNLSGNCSRSGRRSH 458
+ TL + G + +SH
Sbjct: 683 VSWTLQRMIDGGLTLGANKSH 703
>gi|156335399|ref|XP_001619572.1| hypothetical protein NEMVEDRAFT_v1g224056 [Nematostella vectensis]
gi|156203052|gb|EDO27472.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 390 FGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
FGLASAP+ F ++ V LR+RG+R ++YLDD L+ S
Sbjct: 58 FGLASAPRVFTKILKPVVAHLRKRGIRLIIYLDDILIMS 96
>gi|115676944|ref|XP_001186691.1| PREDICTED: uncharacterized protein LOC754693 [Strongylocentrotus
purpuratus]
Length = 1453
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN T + + ++I L + Y IDL++ Y +P+ + F+
Sbjct: 1088 DYRKLNQVTVTDAEPIPDQEEIFAKLSRAKYFTKIDLTKGYWQVPLTEEAKELTAFVTPD 1147
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE-RGVRCLVYLDDFLL 426
+YQ + FGL +AP +F+++ + VLLR GV ++DD L+
Sbjct: 1148 GLYQFRSMPFGLVNAPASFSRI---MRVLLRGLHGVDN--FIDDILI 1189
>gi|422418|pir||S34639 pol protein - fruit fly (Drosophila ananassae) transposon Tom
(fragment)
gi|394705|emb|CAA80824.1| pol protein [Drosophila ananassae]
Length = 1040
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + + LN +F + N +I L K Y TIDL++ + I + + F
Sbjct: 224 VVIDYRKLNEITIPDRFPIPNMDEILGKLGKCQYFTTIDLARGFHQIEMDSESIQKTAFS 283
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
K Y+ + FGL +AP F + N + L + CLVYLDD ++ S
Sbjct: 284 TKRGHYEYVRMPFGLRNAPATFQRCMNNILRPLINK--HCLVYLDDMIIFS 332
>gi|270017030|gb|EFA13476.1| hypothetical protein TcasGA2_TC012973 [Tribolium castaneum]
Length = 1233
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 639 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFV 698
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 699 TPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 749
>gi|353229622|emb|CCD75793.1| KRAB-A domain-containing protein [Schistosoma mansoni]
Length = 1382
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L I L + +T+DL+ Y + + + R+
Sbjct: 524 DSSLRLCIDYRRLNAITKRDSFPLPRIDAILDALSGACWFSTLDLASGYWQVEVRPQDRK 583
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L VL +CL+YLDD ++
Sbjct: 584 KTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQ--TVLQDIVPHKCLIYLDDIIV 635
>gi|350854311|emb|CAZ37895.2| hypothetical protein Smp_183860 [Schistosoma mansoni]
Length = 1382
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L I L + +T+DL+ Y + + + R+
Sbjct: 524 DSSLRLCIDYRRLNAITKRDSFPLPRIDAILDALSGACWFSTLDLASGYWQVEVRPQDRK 583
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L VL +CL+YLDD ++
Sbjct: 584 KTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQ--TVLQDIVPHKCLIYLDDIIV 635
>gi|189236284|ref|XP_001815208.1| PREDICTED: similar to orf [Tribolium castaneum]
gi|270005484|gb|EFA01932.1| hypothetical protein TcasGA2_TC007546 [Tribolium castaneum]
Length = 1475
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 670 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFV 729
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 730 TPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 780
>gi|270017072|gb|EFA13518.1| hypothetical protein TcasGA2_TC001491 [Tribolium castaneum]
Length = 1396
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I+ + + LN + L N +I L + Y +TIDL+ + I ++ F
Sbjct: 500 IVVDYRKLNDITVGDSYPLPNISEILDQLGHSKYFSTIDLTSGFHQIKMSTEDAPKTAFS 559
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
YQ + FGL +AP F +L N VL + RC VYLDD ++
Sbjct: 560 THTGHYQFNRMPFGLKNAPATFQRLMN--NVLSGIQNNRCFVYLDDIVI 606
>gi|358056390|dbj|GAA97679.1| hypothetical protein E5Q_04357 [Mixia osmundae IAM 14324]
Length = 668
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
K +L +DL AY +P+ R L F ++G Y T L F L SAP AF L+ +
Sbjct: 64 KGCWLIKLDLEDAYHQVPVRLADRHLLGFEWRGEQYMSTRLPFELRSAPYAFNLLAEGLH 123
Query: 408 VLLRER-----GVRCLVYLDDFLL 426
+L ER G + YLDDFL+
Sbjct: 124 WIL-ERCALPAGRKIRHYLDDFLI 146
>gi|308512333|ref|XP_003118349.1| hypothetical protein CRE_00852 [Caenorhabditis remanei]
gi|308238995|gb|EFO82947.1| hypothetical protein CRE_00852 [Caenorhabditis remanei]
Length = 1564
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLL 410
T+DL Y IP+ R + F +++ L FGL ++P F A + V LL
Sbjct: 392 FTTLDLLAGYWQIPLEERSKEITAFAIGSELFEYNVLPFGLVTSPAVFQATMEAVVGDLL 451
Query: 411 RERGVRCLVYLDDFLLASQ 429
G VY+DD L+AS+
Sbjct: 452 ---GKNAFVYVDDLLIASE 467
>gi|189236292|ref|XP_001815280.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1505
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 703 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 762
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 763 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 810
>gi|270005481|gb|EFA01929.1| hypothetical protein TcasGA2_TC007543 [Tribolium castaneum]
Length = 8815
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 642 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 701
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 702 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 749
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 3604 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 3663
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 3664 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 3711
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 5102 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 5161
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 5162 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 5209
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 6527 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 6586
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 6587 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 6634
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ T+DL+ Y IP+A F+ Y+ + FGLA+AP F + N V L
Sbjct: 8043 FFTTLDLASGYYQIPMATESIPKTAFVTPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPL 8102
Query: 411 RERGVRCLVYLDDFLLASQD 430
R + C Y+DD L+ S+D
Sbjct: 8103 RFQTAYC--YIDDLLIPSKD 8120
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 2140 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 2199
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N + LR + C Y+ D L+ S+D
Sbjct: 2200 GHYEFVRMPFGLANAPAVFQRAMNKMLDPLRFQTAFC--YIADLLIPSKD 2247
>gi|189236288|ref|XP_001815250.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1523
Score = 47.4 bits (111), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 721 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 780
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 781 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 828
>gi|1905852|gb|AAB50148.1| reverse transcriptase polyprotein [Drosophila melanogaster]
Length = 1041
Score = 47.4 bits (111), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
NT ++ + + LN K+ + N I L K + T+DL A+ I +A + R
Sbjct: 239 GNTKKRLVIDFRKLNLKTIDDKYPIPNVVWILSNLGKARFFTTLDLKSAFHQILLAEKDR 298
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLAS 428
F Y+ L FGL +AP F + + V +R+R G C VY+DD ++ S
Sbjct: 299 AKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAIDDV---VRDRIGKSCYVYVDDVIIFS 353
>gi|350645681|emb|CCD59656.1| KRAB-A domain-containing protein [Schistosoma mansoni]
Length = 1361
Score = 47.4 bits (111), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L I L + +T+DL+ Y + + + R+
Sbjct: 524 DSSLRLCIDYRRLNAITKRDSFPLPRIDAILDALSGACWFSTLDLASGYWQVEVRPQDRK 583
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L VL +CL+YLDD ++
Sbjct: 584 KTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQ--TVLQDIVPHKCLIYLDDIIV 635
>gi|291237364|ref|XP_002738605.1| PREDICTED: polyprotein-like [Saccoglossus kowalevskii]
Length = 556
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 322 LKSLNSYVTTKKFKLINHQKIP---LFLQKNDY---LATIDLSQAYCHIPIARRHRRFLC 375
L S+N ++ + L+ + +I F+ K+ + LA ID+ A+ P+ + L
Sbjct: 121 LDSVNDNISKEDHSLV-YSRIDDAVAFIHKHGHGSLLAKIDVKHAFRLCPVRKEDWHLLG 179
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSN---WVAVLLRERGVRCLVYLDDFL 425
F ++G + L FGL SAP F ++++ W+ V R R L YLDDFL
Sbjct: 180 FFWEGCYFFDRVLPFGLRSAPYLFNRIADAIHWI-VSHRARNTDFLHYLDDFL 231
>gi|189236290|ref|XP_001815266.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1446
Score = 47.4 bits (111), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 670 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFV 729
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 730 TPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 780
>gi|291237354|ref|XP_002738600.1| PREDICTED: polyprotein-like [Saccoglossus kowalevskii]
Length = 443
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 322 LKSLNSYVTTKKFKLINHQ--KIPLFLQKNDY---LATIDLSQAYCHIPIARRHRRFLCF 376
L S+N ++ + L+ + F+ K+ + LA ID+ A+ P+ + L F
Sbjct: 8 LDSVNDNISKEDHSLVYSRIDDAVAFIHKHGHGSLLAKIDVKHAFRLCPVRKEDWHLLGF 67
Query: 377 LYKGTVYQRTCLSFGLASAPQAFAQLSN---WVAVLLRERGVRCLVYLDDFL 425
++G + L FGL SAP F ++++ W+ V R R L YLDDFL
Sbjct: 68 FWEGCYFFDRVLPFGLRSAPYLFNRIADAIHWI-VSHRARNTDFLHYLDDFL 118
>gi|149248918|ref|XP_001528813.1| hypothetical protein LELG_05791 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453354|gb|EDK47610.1| hypothetical protein LELG_05791 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1326
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 63 TFMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFTVRAAISS-N 111
T + TDAS WG ++ N GV + ++R + I KELF++ +++
Sbjct: 746 TTIHTDASTESWGGVLQNTDAHGVTRMVLCYSGKFHGSERHYTIYEKELFSIYLTLNAIQ 805
Query: 112 PSLVANHTVV-LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGK 170
P LV ++ + DNK ++ + K L + + T K L + N I+ I GK
Sbjct: 806 PLLVGYKDILYIYCDNKALVTVLDKP--LENSHFVNRTYKWLNYIRSFNYMII--HIDGK 861
Query: 171 CNSLADALSR 180
N +ADALSR
Sbjct: 862 RNVIADALSR 871
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 809 TFMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFTVRAAISS-N 857
T + TDAS WG ++ N GV + ++R + I KELF++ +++
Sbjct: 746 TTIHTDASTESWGGVLQNTDAHGVTRMVLCYSGKFHGSERHYTIYEKELFSIYLTLNAIQ 805
Query: 858 PSLVANHTVV-LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGK 916
P LV ++ + DNK ++ + K L + + T K L + N I+ I GK
Sbjct: 806 PLLVGYKDILYIYCDNKALVTVLDKP--LENSHFVNRTYKWLNYIRSFNYMII--HIDGK 861
Query: 917 CNSLADALSR 926
N +ADALSR
Sbjct: 862 RNVIADALSR 871
>gi|340368029|ref|XP_003382555.1| PREDICTED: uncharacterized protein K02A2.6-like [Amphimedon
queenslandica]
Length = 1573
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 149/395 (37%), Gaps = 91/395 (23%)
Query: 607 DGTMRPVFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
DG++R + K ++N + T + L + + L + +DL AY IP+ +
Sbjct: 436 DGSIRLCGDYKVTVNPVLLTDTYPLPRSEDLFAALAGGKIFSKLDLKHAYLQIPLDEASK 495
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIV 721
+F P + F+ GV L +R E + L VY+DD L+ D
Sbjct: 496 KFTTINTPKGL--FQYERLPFGVSSAPSLFQRTIENLLSHLQHVCVYIDDILVTGTDDAD 553
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQVRLPVD-KIPPLRD 779
N + LQ L G + K + +PS V+YLG D+D L P + K+ +R+
Sbjct: 554 HLNNLHAVLQTLEEAGLTLKQSKCKFGVPS--VEYLGHIIDSDGLH---PSEAKVKAIRE 608
Query: 780 RLQTQALIELKWF------YHNL-----TGFTPLH----PPVP--------RTF------ 810
+ ELK F YH T +PLH P + F
Sbjct: 609 APTPTNVTELKSFLGLLNYYHKFLPDVATVLSPLHLLLRKDTPWKWSQDQEKAFQKAKAM 668
Query: 811 -----------------MSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHIN 843
++ DAS G GA++ + G + A++ +
Sbjct: 669 LHSSSVLTHYDEKKPLVVACDASPYGLGAVLSHRMSDGTDLPVAYASRTLSAAEKKYSQL 728
Query: 844 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKL-LLIMS 902
KE + A+ + VL SD+K + LL+E+K++ LL +S
Sbjct: 729 EKEALAIIFAVRKFHDYIYGRKFVLHSDHKPL------------QFLLSESKQIPLLALS 776
Query: 903 KLN--------IHIVPYFIPGKCNSLADALSRQAL 929
++ + V + PGK ADALSR L
Sbjct: 777 RIQRWAIALSAYNYVIQYKPGKLIPHADALSRLPL 811
>gi|270016690|gb|EFA13136.1| hypothetical protein TcasGA2_TC002008 [Tribolium castaneum]
Length = 429
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I+ + + LN ++ L N I L ++ Y +TIDL+ + I + + F
Sbjct: 35 IVIDYRKLNEQTVEDRYPLPNINDILDKLGRSQYFSTIDLASGFHQIEVDPNDVQKTAFT 94
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR---CLVYLDDFLLAS 428
+ Y+ + FGL +AP F ++ + V RG+ C+VYLDD ++ S
Sbjct: 95 VENGHYEFVRMPFGLKNAPSTFQRVMDNVL-----RGIVNNCCIVYLDDIIVFS 143
>gi|343475375|emb|CCD13217.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 507
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKND----YLATIDLSQAYCHIPIAR 662
DG+ R + + LN VT + + + L Q N + A IDL+ A+ +P+ +
Sbjct: 64 DGSWRMTVDYRKLNQVVTPIAAAVPD--VVSLLEQINTSPGTWYAAIDLANAFFSVPVHK 121
Query: 663 RHRRFLCFLIPMDMSSF----RPSLSSPGVCPTI---KLGRRLRERGVRCLVYLDDFLLA 715
H++ F +F + ++SP +C + L R + + + Y+DD +L
Sbjct: 122 DHQKQFAFSWQGQQYTFTVLPQGYINSPALCHNLVRRDLDRLDLPQNITLVHYIDDIMLI 181
Query: 716 SQDPIVLKNQILQTLQ-LLTYL---GWQVNLKKSQIIPSHRVDYLGISW 760
+ ++ TL L+T++ GW++N K Q PS V +LG+ W
Sbjct: 182 GPS----EQEVATTLDSLVTHMRIRGWEINPTKIQ-GPSTSVKFLGVQW 225
>gi|432939100|ref|XP_004082581.1| PREDICTED: uncharacterized protein LOC101155559 [Oryzias latipes]
Length = 1196
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y+ T+DL + Y IP+ +++ F +Y T + FGL AP F +L + +L
Sbjct: 664 YITTLDLCKGYWQIPLDETSKQYTAFCAPTGLYHFTVMPFGLHGAPATFQRLMD---AVL 720
Query: 411 RERGVRCLVYLDDFLLASQ 429
R YLDD ++ SQ
Sbjct: 721 RGFEAFSAAYLDDVVIFSQ 739
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ RP + + +N+ + + + + Y+ T+DL + Y IP+ ++
Sbjct: 626 DGSQRPCIDFRKVNAVSCFDAYPMPRIDDLVERVGTAKYITTLDLCKGYWQIPLDETSKQ 685
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE---RGVRCL--VYLDDFLLASQDPIV 721
+ F P + F ++ G+ +RL + RG YLDD ++ SQ
Sbjct: 686 YTAFCAPTGLYHF--TVMPFGLHGAPATFQRLMDAVLRGFEAFSAAYLDDVVIFSQSWED 743
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD-- 779
+ L + G +N +K + V YLG ++R VDK+ +R+
Sbjct: 744 HLMHLRAVLSAIEGAGLTLNAQKCEWAKGE-VQYLGFQLGGG--RIRPLVDKVDAIRNAQ 800
Query: 780 ----RLQTQALIELKWFY-----HNLTGFTPL 802
+ Q ++ I L +Y HN T TPL
Sbjct: 801 RPRTKKQVRSFIGLVGWYSNFIPHNSTLATPL 832
>gi|189241465|ref|XP_001806953.1| PREDICTED: similar to putative gag-pol protein [Tribolium
castaneum]
Length = 588
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS ++ + + Q LQ +T+DL +AY IP+A
Sbjct: 230 DYRRLNSVTVPDRYPIPHIQDFASKLQGKKVFSTLDLVRAYHQIPVAEEDIPKTAVCTPF 289
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+++ T ++FGL +A Q F + N V L C Y+DD L+AS+
Sbjct: 290 GLFEFTVMTFGLCNAAQTFQRYLNSVLSDLD----FCFNYIDDILVASE 334
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G RP + + LNS ++ + + Q LQ +T+DL +AY IP+A
Sbjct: 223 GEWRPCGDYRRLNSVTVPDRYPIPHIQDFASKLQGKKVFSTLDLVRAYHQIPVAEEDIPK 282
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR----CLVYLDDFLLASQDP 719
P + F ++ + G+C + +R + C Y+DD L+AS+ P
Sbjct: 283 TAVCTPFGLFEF--TVMTFGLCNAAQTFQRYLNSVLSDLDFCFNYIDDILVASESP 336
>gi|149236387|ref|XP_001524071.1| hypothetical protein LELG_04884 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452447|gb|EDK46703.1| hypothetical protein LELG_04884 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1345
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 63 TFMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFTVRAAISS-N 111
T + TDAS WG ++ N GV + ++R + I KELF++ +++
Sbjct: 765 TTIHTDASTESWGGVLQNTDAHGVTRMVLCYSGKFHGSERHYTIYEKELFSIYLTLNAIQ 824
Query: 112 PSLVANHTVV-LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGK 170
P LV ++ + DNK ++ + K L + + T K L + N I+ I GK
Sbjct: 825 PLLVGYKDILYIYCDNKALVTVLDKP--LENSHFVNRTYKWLNYIRSFNYMII--HIDGK 880
Query: 171 CNSLADALSR 180
N +ADALSR
Sbjct: 881 RNVIADALSR 890
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 809 TFMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFTVRAAISS-N 857
T + TDAS WG ++ N GV + ++R + I KELF++ +++
Sbjct: 765 TTIHTDASTESWGGVLQNTDAHGVTRMVLCYSGKFHGSERHYTIYEKELFSIYLTLNAIQ 824
Query: 858 PSLVANHTVV-LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGK 916
P LV ++ + DNK ++ + K L + + T K L + N I+ I GK
Sbjct: 825 PLLVGYKDILYIYCDNKALVTVLDKP--LENSHFVNRTYKWLNYIRSFNYMII--HIDGK 880
Query: 917 CNSLADALSR 926
N +ADALSR
Sbjct: 881 RNVIADALSR 890
>gi|189242078|ref|XP_001808624.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1242
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 469 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 528
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 529 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 576
>gi|328867820|gb|EGG16201.1| hypothetical protein DFA_09229 [Dictyostelium fasciculatum]
Length = 1100
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + ++LN +F L ++ + K + IDL + I I H
Sbjct: 461 LRMCVDFRALNKQTVADRFPLPRIDQLIEKIAKAKIFSKIDLKDGFNQIRIKDEHTHKTA 520
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK 435
F Y+ T + FGL +AP AF + N + + V ++Y+DD L+ S++
Sbjct: 521 FSTPSGHYEYTVIPFGLRNAPSAFVRAINAAFADILDTFV--IIYIDDILIFSENENDHY 578
Query: 436 NQIFQTL 442
I Q L
Sbjct: 579 EHIKQVL 585
>gi|308480035|ref|XP_003102225.1| hypothetical protein CRE_05815 [Caenorhabditis remanei]
gi|308262151|gb|EFP06104.1| hypothetical protein CRE_05815 [Caenorhabditis remanei]
Length = 2406
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 143/379 (37%), Gaps = 70/379 (18%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT R + + LN+ + +++ I + +DL Q + IP+ + R
Sbjct: 1464 DGTYRFTTDFRLLNAVTVKQNYQIPLISDIVDLASDGTFFTNLDLIQGFFQIPLRKEDRP 1523
Query: 667 FLCFLIPMDMSSF-RPSLSSPGVCPTIKLG-RRLRER-GVRCLVYLDDFLLASQDPIVLK 723
F P + R + G T + R+L+++ + YLDD L+ S
Sbjct: 1524 LTAFATPTGTYQYKRMPMGLCGAPHTFQTAVRQLQKKTKAKLFCYLDDLLIVSNTLEQHM 1583
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ---------VRLPVDKI 774
I + LQ + +G++V ++K + V +LG+ + ++ PV K
Sbjct: 1584 KDIEEVLQNIAEIGFKVKIEKCKFAQPE-VTFLGLLVGRNGVKPNPAKVKSIKEFPVPKT 1642
Query: 775 P-------------------------PLRDRLQTQALIELKWFYHNLTGFTPLHP----- 804
P PL D T+ + W + F L
Sbjct: 1643 PTGVRAFLGMTNYFRKFIRQFAELAAPLHD--LTKKDQQFVWEEKHQESFDQLKAALCCT 1700
Query: 805 PV---PRT----FMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKEL 847
PV PR + +DAS + GA++ G T +R + E
Sbjct: 1701 PVLQAPRAGFPFVIESDASSIAVGALLLQTGEDGELHPIAYDSRKLTTTERKYPPIETEA 1760
Query: 848 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 907
+ A+ + + + +V D++ + + + ++ L+ K +I+ ++++
Sbjct: 1761 LALAFAVKAFRTYILGSSVTAIVDHRPLTSLMHRRD------LIGRLAKYQIILQEMDLT 1814
Query: 908 IVPYFIPGKCNSLADALSR 926
I+ + PGK NS+ DALSR
Sbjct: 1815 II--YRPGKLNSVCDALSR 1831
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 318 IMFNLKSLNSYVTTKKFKLIN------HQKIPLFLQKND------YLATIDLSQAYCHIP 365
I+ K +Y T F+L+N + +IPL D + +DL Q + IP
Sbjct: 1457 IVLVRKKDGTYRFTTDFRLLNAVTVKQNYQIPLISDIVDLASDGTFFTNLDLIQGFFQIP 1516
Query: 366 IARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFL 425
+ + R F YQ + GL AP F V L ++ + YLDD L
Sbjct: 1517 LRKEDRPLTAFATPTGTYQYKRMPMGLCGAPHTF---QTAVRQLQKKTKAKLFCYLDDLL 1573
Query: 426 LAS 428
+ S
Sbjct: 1574 IVS 1576
>gi|326677062|ref|XP_003200745.1| PREDICTED: hypothetical protein LOC559994 [Danio rerio]
Length = 9154
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 36/278 (12%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LNS + + L + +L TIDLS+ Y IP+ + R
Sbjct: 1103 DGSIRFCIDFRYLNSVTKFDAYPTPRISDLTDRLGTSKFLTTIDLSKGYWQIPLTPQSRE 1162
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVL 722
F P + F+ + + G+ +RL + +R L YLDD ++ S
Sbjct: 1163 LTAFKTPWGLFHFK--VLAFGLHGAPASFQRLMDHVLRGLPFTAAYLDDIVVYSDTWQQH 1220
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP----VDKIPPLR 778
+ + LQ L G VN +K I + +YLG +L+ ++ +++ P +
Sbjct: 1221 LQHLQEVLQRLQAAGLTVNPQKCTIAKAE-TEYLGFVIGKGVLRPQVEKVRAIERCPQPQ 1279
Query: 779 DRLQTQALIELKWFYH----NLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVS-VQGVW 833
R + ++ + + FYH N +G R + TD MVG+ S Q W
Sbjct: 1280 TRKELRSFLGMAGFYHRFIPNFSG---------RAAVLTD--------MVGSRSPNQLKW 1322
Query: 834 TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSD 871
TQ + +L++ + + ++ NP + VLQ+D
Sbjct: 1323 TQETVAAFQDLRKALS-KDSVLHNPDF--HQPFVLQTD 1357
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+L TIDLS+ Y IP+ + R F ++ L+FGL AP +F +L + V
Sbjct: 1141 FLTTIDLSKGYWQIPLTPQSRELTAFKTPWGLFHFKVLAFGLHGAPASFQRLMDHVL--- 1197
Query: 411 RERGVR-CLVYLDDFLLAS 428
RG+ YLDD ++ S
Sbjct: 1198 --RGLPFTAAYLDDIVVYS 1214
>gi|270005488|gb|EFA01936.1| hypothetical protein TcasGA2_TC007550 [Tribolium castaneum]
Length = 1119
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 673 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 732
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 733 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 780
>gi|189236296|ref|XP_001815322.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1271
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 469 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 528
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 529 GHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 576
>gi|12698634|gb|AAK01619.1|AF314096_2 polymerase [Magnaporthe grisea]
Length = 1418
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
+ GL + + LN+ L ++ + K + ID+ QA+ I + HR
Sbjct: 449 GDGGLRFCVDYRKLNALTKKDVCPLPLIEETLARISKARFFTKIDIRQAFHRIRMNPEHR 508
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+ F + ++ L FGL + P F + N +L+ C Y+DD L+ S+
Sbjct: 509 DYTTFRTRYGTFRYNVLPFGLTNGPATFQKFIN--EILMEYLDDFCSAYMDDILIWSETE 566
Query: 432 VVLKNQIFQTL 442
+ + Q L
Sbjct: 567 EEHQTHVRQVL 577
>gi|270005482|gb|EFA01930.1| hypothetical protein TcasGA2_TC007544 [Tribolium castaneum]
Length = 955
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 621 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFV 680
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 681 TPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 731
>gi|727181|gb|AAA64258.1| pol [Simian immunodeficiency virus]
Length = 1049
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
T ++ + + LN VT F++ P LQK + +D+ AY IP+ R+
Sbjct: 256 KTQWRMLVDFRELNK-VTQDFFEVQLGIPHPAGLQKMKQITVLDIGDAYYSIPLDPEFRK 314
Query: 373 FLCFLY-------KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE--RGVRCLVYLDD 423
+ F G YQ CL G +P F + + ++E + + + Y+DD
Sbjct: 315 YTAFTIPSVNNQGPGVRYQFNCLPQGWKGSPTIFQNTAAKILEKIKEELKPLTIVQYMDD 374
Query: 424 FLLASQDSVVLKNQIFQTLPVNLS 447
+ SQ+ +++ + L V L
Sbjct: 375 LWVGSQEDEYTHDKLVEQLRVKLK 398
>gi|189236280|ref|XP_001815148.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 3364
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 1269 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFV 1328
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 1329 TPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 1379
>gi|358336229|dbj|GAA54788.1| retrovirus-related Pol polyprotein from transposon 17.6, partial
[Clonorchis sinensis]
Length = 594
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN T L + + +T+DL+ Y + +A + R
Sbjct: 474 LRMCIDYRRLNDITTRDSLPLPRVDDTIDAVAGAKWFSTLDLASGYWQVEVAPQDRPKTA 533
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGLA+AP F +L V L CL+YLDD ++
Sbjct: 534 FIIPSGLYEFETMPFGLANAPATFQRLMQTVLAGLVPGS--CLIYLDDIIV 582
>gi|427791017|gb|JAA60960.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1164
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ +Y +++DL Y IP+ + F +Y+ + FGL +AP F ++ +
Sbjct: 377 LQGAEYFSSLDLRSGYWQIPMHEDDKEKTAFATPDGLYEFNVMPFGLCNAPATFERMIDT 436
Query: 406 VAVLLRERGVR---CLVYLDDFLLAS 428
V RG++ CL YLDD ++ S
Sbjct: 437 VL-----RGLKWKTCLCYLDDIVIFS 457
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + ++LN + + LQ +Y +++DL Y IP+ +
Sbjct: 344 DGSVRFCVDYRALNKITRKDVYPMPRIDDALDSLQGAEYFSSLDLRSGYWQIPMHEDDKE 403
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE---RGVR---CLVYLDDFLLASQDPI 720
F P + F ++ G+C R+ + RG++ CL YLDD ++ S
Sbjct: 404 KTAFATPDGLYEF--NVMPFGLCNAPATFERMIDTVLRGLKWKTCLCYLDDIVIFSSTFP 461
Query: 721 VLKNQILQTLQLLTYLGWQVNLK------KSQIIPSHRVDYLGISWDTDLLQ--VRLPVD 772
++ + L L G Q+N K KS + H V GI D D + +R P
Sbjct: 462 QHLQRLDEVLTCLASAGLQLNTKKCCFATKSIKVLGHVVSKDGIRPDPDKIAAVLRFPRP 521
Query: 773 KIP-PLRDRLQTQALIELKWFYHNLTGFTPLH 803
+ P LR L + ++ H + PLH
Sbjct: 522 ERPKELRSFLGLASYFR-RFIQHFASIAAPLH 552
>gi|308456085|ref|XP_003090513.1| hypothetical protein CRE_11530 [Caenorhabditis remanei]
gi|308262814|gb|EFP06767.1| hypothetical protein CRE_11530 [Caenorhabditis remanei]
Length = 1122
Score = 47.0 bits (110), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLL 410
T+DL Y IP+ + + F +Y+ L FGL ++P F A + V LL
Sbjct: 959 FTTLDLLAGYWQIPLDEKSKEITAFAIGSELYEYNVLPFGLVTSPAVFQATMEAVVGDLL 1018
Query: 411 RERGVRCLVYLDDFLLASQ 429
G VY+DD L+AS+
Sbjct: 1019 ---GKTAYVYVDDLLIASE 1034
>gi|4165194|emb|CAA08807.1| Pol protein [Drosophila melanogaster]
Length = 1150
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
++ + ++LN KF + +I L + Y TIDL++ + I +
Sbjct: 335 FRLVVDYRNLNEITVNDKFPIPRMDEILDKLGRCQYFTTIDLAKGFHQIQMDENSIAKTA 394
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS---QDS 431
F K Y+ T + FGL +AP F + ++N + L+ + CLVYLDD ++ S ++
Sbjct: 395 FSTKHGHYEYTRMPFGLKNAPATFQRCMNNLLEDLIYK---DCLVYLDDIIVYSTPLEEH 451
Query: 432 VVLKNQIFQTL 442
++ ++F+ L
Sbjct: 452 ILSLKKVFEKL 462
>gi|130398|sp|P20825.1|POL2_DROME RecName: Full=Retrovirus-related Pol polyprotein from transposon
297; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
gi|6015506|emb|CAB57796.1| unnamed protein product [Drosophila melanogaster]
Length = 1059
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + + LN ++ + N +I L K Y TIDL++ + I + F
Sbjct: 263 VVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFS 322
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS 428
K Y+ + FGL +AP F + ++N + LL + CLVYLDD ++ S
Sbjct: 323 TKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNK---HCLVYLDDIIIFS 371
>gi|328871951|gb|EGG20321.1| hypothetical protein DFA_07444 [Dictyostelium fasciculatum]
Length = 1441
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + ++LN +F L ++ + K + IDL + I I H
Sbjct: 559 LRMCVDFRALNKQTVADRFPLPRIDQLIEKIAKAKIFSKIDLKDGFNQIRIKDEHTHKTA 618
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK 435
F Y+ T + FGL +AP AF + N + + V ++Y+DD L+ S++
Sbjct: 619 FSTPSGHYEYTVIPFGLRNAPSAFVRAINAAFADILDTFV--IIYIDDILIFSENENDHY 676
Query: 436 NQIFQTL 442
I Q L
Sbjct: 677 EHIKQVL 683
>gi|340381288|ref|XP_003389153.1| PREDICTED: hypothetical protein LOC100634784 [Amphimedon
queenslandica]
Length = 1057
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
+ ++A +DL AY +P+ + L + ++ L FGL SAP+ F ++N +A
Sbjct: 427 RGAWMAKLDLRSAYRRVPVHPDDQPLLGMAWDDRIFCDRALPFGLRSAPKVFTAVANALA 486
Query: 408 VLLRERGVRCLV-YLDDFLLAS 428
++ G+ L+ YLDDF S
Sbjct: 487 WAMQCEGIGDLIHYLDDFFFWS 508
>gi|195136052|ref|XP_002012399.1| GI11945 [Drosophila mojavensis]
gi|193906515|gb|EDW05382.1| GI11945 [Drosophila mojavensis]
Length = 1864
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + LN + L I L+ Y++T+DL Y IP+A+ R
Sbjct: 669 NNKWRMCVDYRQLNERSIPDAYPLPRMTHILEKLRHAKYISTLDLKNGYWQIPMAKEGRE 728
Query: 373 FLCFLYKGT-VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F G ++ +SFGL SAP F + + +++ E YLDD ++ +
Sbjct: 729 CTAFTVPGRGLFHWKVMSFGLHSAPATFQRALD--SIIGPEMEPYAFAYLDDIVVVAATL 786
Query: 429 QDSVVLKNQIFQTL 442
++ + + ++F+ L
Sbjct: 787 EEHMRVLREVFRRL 800
>gi|15217350|gb|AAK92688.1|AC090714_21 putative polyprotein [Oryza sativa Japonica Group]
gi|108709312|gb|ABF97107.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1120
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 22/224 (9%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + ++LN K+ L + L+ + IDL Y + I +
Sbjct: 578 DGSLRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQLKIRQEDIS 637
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
F+ + +Y+ T ++F L +AP F L N + + ++ + +V++DD L+ SQ+
Sbjct: 638 KTAFVTRYELYEFTVMAFELTNAPAYFMNLMNKIFMEYLDQFI--VVFIDDILIYSQNEE 695
Query: 433 VLKNQIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYI---RKQVG-- 487
K + L L A ++L +K Y R+ +G
Sbjct: 696 EHKQHLRLVL-------------EKLRQQQLYAKFMLILPDIHKDFEIYCDASRQGLGCV 742
Query: 488 LRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQA 531
L L + ++ L ++ N+ I+ + P K N +ADALS++A
Sbjct: 743 LMQEDLNLQQRRWLELIKDYNLEIL--YHPRKANVVADALSQKA 784
>gi|294900961|ref|XP_002777195.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239884666|gb|EER09011.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 463
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + ++LN T+ + + + L L+T+DL Y IP+ + +R
Sbjct: 315 NGKVRMCIDYRNLNKACHTEAYPVPRPDDVQEHLAGARVLSTLDLRSGYWQIPVRKEDQR 374
Query: 373 FLCFLYKG--TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y+ + FGLASAP F +L + A+L VR VYLDD L+ S+
Sbjct: 375 KTAFCPGPGFPLYEWVMMPFGLASAPATFQRLMD--AILGHLPFVR--VYLDDVLIFSR 429
>gi|432871584|ref|XP_004071988.1| PREDICTED: uncharacterized protein LOC101170592 [Oryzias latipes]
Length = 1675
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLIN-HQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 376
+ +L+++N T + + H+ + + + IDL+ A+ IP+ R F
Sbjct: 601 MAHDLRAVNDVTITPVLPVPDPHRMLSTLTPQCVWFTAIDLANAFFCIPLHENSRHLFAF 660
Query: 377 LYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS 428
YKG Q T L G ++P F Q L + + L G L+Y+DD LLA+
Sbjct: 661 QYKGVRLQYTRLPQGFKNSPGIFNQCLKSCLQDLELPGGCVLLMYVDDLLLAA 713
>gi|390367672|ref|XP_003731307.1| PREDICTED: uncharacterized protein K02A2.6-like [Strongylocentrotus
purpuratus]
Length = 1077
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 294 SSNGLLSGNDRGHDIGNLA-----NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQK 348
S+G++ D + NL N L + +L+++N + K+ L ++
Sbjct: 215 ESDGIIERIDSSPWVSNLVIARRKNGDLRLCVDLRAVNKAIIPDKYPLPTMNELSASFHG 274
Query: 349 NDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAV 408
+ +D+ ++Y +P+A + R F ++Q +++GL SAP AF ++ + +V
Sbjct: 275 AKVFSKLDMRRSYLQVPLAEQSRHLTAFNTHIGMFQYRRMTYGLNSAPSAFQKIVS--SV 332
Query: 409 LLRERGVRCLVYLDDFLLASQD 430
L G L LDD ++ +D
Sbjct: 333 LAGIEGT--LNLLDDVVVFGED 352
>gi|291225352|ref|XP_002732664.1| PREDICTED: polyprotein-like [Saccoglossus kowalevskii]
Length = 553
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 345 FLQKNDY---LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ 401
F+ K+ + LA ID+ A+ P+ + L F ++G + L FGL SAP F +
Sbjct: 146 FIHKHGHGSLLAKIDVKHAFRLCPVRKEDWHLLGFFWEGCYFFDRVLPFGLRSAPYLFNR 205
Query: 402 LSN---WVAVLLRERGVRCLVYLDDFL 425
+++ W+ V R R L YLDDFL
Sbjct: 206 IADAIHWI-VSHRARNKDFLHYLDDFL 231
>gi|385145298|emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
Length = 699
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 144/383 (37%), Gaps = 72/383 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K LN + L N +++ + Y ++ D + + +A +
Sbjct: 321 GKARMVINYKKLNDNTKGDGYLLPNKEQLLQRIGGKTYYSSFDCKSGFWQVRLAPETIQL 380
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR-----CLVYLDDFLLASQDPIVL 722
F P + P I R + E C VY+DD ++ S+
Sbjct: 381 TAFSCPQGHYEWLVMPFGLKQAPAI-FQRHMDESLSNMYPSFCAVYVDDIIVFSKTEDEH 439
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVD---------- 772
+ L LG ++ KK+Q+ + +++LG+ + L+V+ +
Sbjct: 440 LGHVKIVLNRCKALGIVLSKKKAQLCKT-TINFLGLVIERGNLKVQSHIGLHLTAFPDQL 498
Query: 773 ---------------------KIPPLRDRLQTQALIELKWFYHN------------LTGF 799
KI LR LQ + E+ W + +
Sbjct: 499 ADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRKIKSLVKSL 558
Query: 800 TPLHPPVP--RTFMSTDASDVGWGAMV------GNVSV----QGVWTQAQRSWHINLKEL 847
L+ P P + + DASD WGA++ G + G + A++++H N KE+
Sbjct: 559 PDLYNPSPEDKPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAEKNYHSNEKEI 618
Query: 848 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 907
++ AI + + + + ++++DN ++R + + K+ L+ ++ +
Sbjct: 619 LSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTN-------IAGDYKQSRLVRWQMALR 671
Query: 908 IVPYFIP---GKCNSLADALSRQ 927
+ I G+ N LAD ++R+
Sbjct: 672 EYSFDIEHVSGQKNVLADIMTRE 694
>gi|328868140|gb|EGG16520.1| hypothetical protein DFA_09058 [Dictyostelium fasciculatum]
Length = 1302
Score = 46.6 bits (109), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + ++LN +F L ++ + K + IDL + I I H
Sbjct: 427 LRMCVDFRALNKQTVADRFPLPRIDQLIEKIAKAKIFSKIDLKDGFNQIRIKDEHTHKTA 486
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK 435
F Y+ T + FGL +AP AF + N + + V ++Y+DD L+ S++
Sbjct: 487 FSTPSGHYEYTVIPFGLRNAPSAFVRAINAAFADILDTFV--IIYIDDILIFSENENDHY 544
Query: 436 NQIFQTL 442
I Q L
Sbjct: 545 EHIKQVL 551
>gi|28195287|gb|AAO27306.1| TyB3p [Saccharomyces paradoxus]
Length = 1255
Score = 46.6 bits (109), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A + R
Sbjct: 405 FTTLDLHSGYHQIPMDPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADIFR 461
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 462 DLRFVN--VYLDDILIFSE 478
>gi|328866329|gb|EGG14714.1| hypothetical protein DFA_10972 [Dictyostelium fasciculatum]
Length = 1344
Score = 46.6 bits (109), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + ++LN +F L ++ + K + IDL + I I H
Sbjct: 469 LRMCVDFRALNKQTVADRFPLPRIDQLIEKIAKAKIFSKIDLKDGFNQIRIKDEHTHKTA 528
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK 435
F Y+ T + FGL +AP AF + N + + V ++Y+DD L+ S++
Sbjct: 529 FSTPSGHYEYTVIPFGLRNAPSAFVRAINAAFADILDTFV--IIYIDDILIFSENENDHY 586
Query: 436 NQIFQTL 442
I Q L
Sbjct: 587 EHIKQVL 593
>gi|270000993|gb|EEZ97440.1| hypothetical protein TcasGA2_TC011271 [Tribolium castaneum]
Length = 1355
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y +++DL + H+ +A+ ++ F+ ++ + FGL +AP+ F +
Sbjct: 606 LQNKRYFSSLDLKNGFYHVKMAKDSIKYTSFVTPLGQFEFLKMPFGLTNAPKVFQRC--- 662
Query: 406 VAVLLRE--RGVRCLVYLDDFLLASQ 429
V ++ + R + LVYLDD L+A++
Sbjct: 663 VQIVFDDLIRDNKILVYLDDILVATE 688
>gi|326669453|ref|XP_003199018.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1375
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 65 MSTDASDVGWGAMVGNVS-----------VQGVWTQAQRSWHINLKELFTVRAAISSNPS 113
+ DASD+G GA++ S + T AQR++ I +EL V+ A+
Sbjct: 761 VEVDASDIGIGAVLSQRSKTDNKLHPCAYLSHRLTPAQRNYDIGNRELLAVKVALEEWRH 820
Query: 114 LV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 171
+ A H ++ +D+K + YIR+ L S + L ++ + + + PG
Sbjct: 821 WLEGAKHPFLIWTDHKN-LTYIREAKRLNSRQ-----ARWALFFNRFDFTLS--YRPGSK 872
Query: 172 NSLADALSRQALIPDWHLLPSL---TESVFQ--RWGIESCAALCDPES-PG 216
NS DALSRQ D P L T V +WGIE P++ PG
Sbjct: 873 NSKPDALSRQFGSLDSETTPELIIPTSRVVGAIQWGIEETVRRAQPQTVPG 923
>gi|341902993|gb|EGT58928.1| hypothetical protein CAEBREN_19301 [Caenorhabditis brenneri]
Length = 2472
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 15/178 (8%)
Query: 314 TGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
T + ++LN+ T + + N +I + T+D Q + IP+ H
Sbjct: 1659 TSWRFTVDFRALNAMTTPVQSVIPNIHEILDLCAGKAFYTTLDFQQGFHQIPVEPAHCPR 1718
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F ++ + GL +P F ++ N L++E R VY+DD ++ S+D++
Sbjct: 1719 TAFACHMGAFEYIRMPMGLKGSPGTFQRVMN---SLIKEIRARIFVYIDDMVITSEDAIQ 1775
Query: 434 LKNQIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSN 491
I + L +SG + P A ++ + +I + G+R N
Sbjct: 1776 HLKDIEEVL-----DQIEKSGMKLRPEKCKFALPEIIY-------LGFIISKAGIRPN 1821
>gi|147802657|emb|CAN64159.1| hypothetical protein VITISV_015783 [Vitis vinifera]
Length = 1649
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + ++ + N + + L K+ + + D+ + I IA ++R F+
Sbjct: 906 LVINYKPLNDVLRWIRYPIPNKKDLLQRLVKSKFFSKFDMKSGFWQIQIAEKYRYKTAFV 965
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL +AP F + N + + +VY+DD L+ S DSV
Sbjct: 966 VPFGHYEWNVMPFGLKNAPSEFQNIMNEI---FNQFSDFIIVYIDDVLIYS-DSV 1016
>gi|328875770|gb|EGG24134.1| hypothetical protein DFA_06276 [Dictyostelium fasciculatum]
Length = 1320
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + ++LN +F L ++ + K + IDL + I I H
Sbjct: 427 LRMCVDFRALNKQTVADRFPLPRIDQLIEKIAKAKIFSKIDLKDGFNQIRIKDEHTHKTA 486
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK 435
F Y+ T + FGL +AP AF + N + + V ++Y+DD L+ S++
Sbjct: 487 FSTPSGHYEYTVIPFGLRNAPSAFVRAINAAFADILDTFV--IIYIDDILIFSENENDHY 544
Query: 436 NQIFQTL 442
I Q L
Sbjct: 545 EHIKQVL 551
>gi|294894738|ref|XP_002774931.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239880706|gb|EER06747.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 1653
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + ++LN T+ + + + L +T+DL Y IP+ + +R
Sbjct: 267 NGKVRMCIDYRNLNKACHTEAYPVPRPDDVQEHLAGARVFSTLDLRSGYWQIPVRKEDQR 326
Query: 373 FLCFLYKG--TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y+ + FGLASAP F +L + A+L VR VYLDD L+ S+
Sbjct: 327 KTAFCPGPGFPLYEWVMMPFGLASAPATFRRLMD--AILGHLPFVR--VYLDDVLIFSR 381
>gi|509002|gb|AAA46350.1| ORF5; putative [Cauliflower mosaic virus]
Length = 675
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 138/381 (36%), Gaps = 66/381 (17%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K++N + N ++ ++ ++ + + + + + R
Sbjct: 294 GKKRMVVNYKAMNKATVGDAYNPPNKDELLTLIRGKKIFSSFHCNSGFWQVLLDQESRPL 353
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLAS---QDPI 720
F P + P+I R + E R R C VY+DD L+ S +D +
Sbjct: 354 TAFTCPQGHYEWNVVPFGLKQAPSI-FQRHMDEAFRVFRKFCCVYVDDILVFSNNEEDHL 412
Query: 721 VLKNQILQTLQ----------------LLTYLGWQVNL---KKSQIIPSHRVDYLGISWD 761
+ ILQ + +LG +++ K I H + D
Sbjct: 413 LHVAMILQKCNQHGIILSKKKAQLFKKKINFLGLEIDEGTHKPQGHILEHINKFPDTLED 472
Query: 762 TDLLQVRLPV-----DKIPPL---RDRLQTQALIELKWFY------------HNLTGFTP 801
LQ L + D IP L R LQ + + W + NL F P
Sbjct: 473 KKQLQRFLGILTYASDYIPKLAQIRKPLQAKLKENVPWKWTKEDTLYMQKVKKNLQAFPP 532
Query: 802 LHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRSWHINLKE 846
LH P+P + + TDASD WG M+ + + G + A++++H N KE
Sbjct: 533 LHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKNYHSNDKE 592
Query: 847 LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNI 906
V I + ++++DN +++ + + L + +S +
Sbjct: 593 TLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQAWLSHYSF 650
Query: 907 HIVPYFIPGKCNSLADALSRQ 927
+ I G N AD LSR+
Sbjct: 651 DV--EHIKGTDNHFADFLSRE 669
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 19/148 (12%)
Query: 49 NLTGFTPLHPPVP--RTFMSTDASDVGWGAMVGNVSVQ-------------GVWTQAQRS 93
NL F PLH P+P + + TDASD WG M+ + + G + A+++
Sbjct: 526 NLQAFPPLHHPLPEEKLIIETDASDDYWGGMLKAIKINEGTNTELICRYASGSFKAAEKN 585
Query: 94 WHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLL 153
+H N KE V I + ++++DN +++ + + L +
Sbjct: 586 YHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFV--NLNYKGDSKLGRNIRWQA 643
Query: 154 IMSKLNIHIVPYFIPGKCNSLADALSRQ 181
+S + + I G N AD LSR+
Sbjct: 644 WLSHYSFDV--EHIKGTDNHFADFLSRE 669
>gi|345492575|ref|XP_001599098.2| PREDICTED: hypothetical protein LOC100113759 [Nasonia vitripennis]
Length = 584
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
AN +L+ +N+ + + L + I L+ Y++TID SQA+ IP+ ++ R
Sbjct: 386 ANGTRRFCLDLRKINAIIKKDAYTLPLMESILDKLRVARYISTIDFSQAFLQIPLEKKSR 445
Query: 372 RFLCFLYKG-TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F G ++ L +GL+++P F +L + +++ E Y+DD ++ ++
Sbjct: 446 EITAFAVPGKALFHFKRLPYGLSNSPGIFQRLVD--SLIGPELQPHIYSYVDDLIVVTE 502
Score = 43.1 bits (100), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+GT R +L+ +N+ + + L + I L+ Y++TID SQA+ IP+ ++ R
Sbjct: 386 ANGTRRFCLDLRKINAIIKKDAYTLPLMESILDKLRVARYISTIDFSQAFLQIPLEKKSR 445
Query: 666 RFLCFLIP 673
F +P
Sbjct: 446 EITAFAVP 453
>gi|254587275|emb|CAX83694.1| Gap-Pol polyprotein [Schistosoma japonicum]
Length = 1360
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ F L L + +T+DL+ Y + I + R+
Sbjct: 504 DNSLRLCVDYRRLNAIAKRDSFPLPRIDATLDALGGAQWFSTLDLASRYWQVEIRPKDRQ 563
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L V L + RCL+YLDD ++
Sbjct: 564 KTAFVIPTGLYEFETMPFGLTNAPATFQRLIQTVLDGLVPK--RCLIYLDDIIV 615
>gi|4325361|gb|AAD17358.1| contains similarity to reverse transcriptase (Pfam: PF00078,
Score=137.6, E=2.3e-37, N=1) and CCHC-type zinc fingers
(Pfam: PF00098, Score=18.3, E=0.024, N=2) [Arabidopsis
thaliana]
Length = 901
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ + + LN KK+ L ++ L+ + ID + Y IPIA + R
Sbjct: 430 FRLCIDYRGLNQVTMKKKYPLPRINELLDQLRGATCFSKIDFTSGYHQIPIAEAYVRKTA 489
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ + FGL +AP AF +L N V + V ++++DD L+ S+
Sbjct: 490 FKTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFV--IIFIDDILVYSK 541
>gi|115676941|ref|XP_785663.2| PREDICTED: uncharacterized protein LOC580518 [Strongylocentrotus
purpuratus]
Length = 1487
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN T + + ++I L + Y IDL++ Y +P+ + F+
Sbjct: 1122 DYRKLNQVTVTDAEPIPDQEEIFAKLSRAKYFTKIDLTKGYWQVPLTEEAKELTAFVTPD 1181
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
+YQ + FGL +AP +F+++ A+L GV ++DD L+
Sbjct: 1182 GLYQFRSMPFGLVNAPASFSRIMR--ALLRGLHGVDN--FIDDILI 1223
>gi|77550763|gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1469
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I R
Sbjct: 589 DGSIRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTRDIP 648
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 649 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 705
>gi|326677789|ref|XP_003200913.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type 1-like
[Danio rerio]
Length = 1465
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 28/198 (14%)
Query: 38 QALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVS-----------VQGV 86
+A LK + + F P +P + DASD+G GA++ S +
Sbjct: 813 KAFNRLKSLFTSAPIFALPDPELP-FVVEVDASDIGIGAVLSQRSKTDNKLHPCAYLSHR 871
Query: 87 WTQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHAL 144
T AQR++ I +EL V+ A+ + A H ++ +D+K + YIR+ L S
Sbjct: 872 LTPAQRNYDIGKRELLAVKVALEEWRHWLEGAKHPFLIWTDHKN-LTYIREAKRLNSRQ- 929
Query: 145 LAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSL---TESVFQ-- 199
+ L ++ + + + PG NS DALSRQ D P L T V
Sbjct: 930 ----ARWALFFNRFDFTLS--YRPGSKNSKPDALSRQFGSLDSETTPELILPTSRVVGAI 983
Query: 200 RWGIESCAALCDPES-PG 216
+WGIE P++ PG
Sbjct: 984 QWGIEETVRRGQPQTVPG 1001
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 148/398 (37%), Gaps = 77/398 (19%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++RP + + LN ++ L LQ +DL AY + I
Sbjct: 587 DGSLRPCIDYRGLNHITIKNRYPLPLMNTAFEILQGATIFTKLDLRNAYHLVRIKEGDEW 646
Query: 667 FLCFLIPMDMSSFRPS----LSSPGVCPTI--KLGRRLRERGVRCLVYLDDFLLASQDPI 720
P ++ +++P V + R++ R V VYLDD L+ S
Sbjct: 647 KTALNTPTGHYEYQVMPFGLVNAPAVFQAFINDVLRKMLNRLV--FVYLDDILIFSSSCE 704
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGI-----SWDTDLLQVRLPVDKIP 775
+ Q L L V L+KS+ S +V +LG S D +++ +D P
Sbjct: 705 EHVQHVRQVLSQLLRHRLFVKLEKSEFHVS-KVLFLGFIVSKCSLQMDPGKIKAVLD-WP 762
Query: 776 PLRDRLQTQALIELKWFYHN-LTGFTPLHPPV-------PRTFMST-------------- 813
R + Q + FY + GF+ + P+ ++F+ T
Sbjct: 763 QPRSVKEVQRFLGFANFYRRFIRGFSSIAEPLTALTKKTAKSFVWTEMANKAFNRLKSLF 822
Query: 814 -------------------DASDVGWGAMVGNVS-----------VQGVWTQAQRSWHIN 843
DASD+G GA++ S + T AQR++ I
Sbjct: 823 TSAPIFALPDPELPFVVEVDASDIGIGAVLSQRSKTDNKLHPCAYLSHRLTPAQRNYDIG 882
Query: 844 LKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIM 901
+EL V+ A+ + A H ++ +D+K + YIR+ L S + L
Sbjct: 883 KRELLAVKVALEEWRHWLEGAKHPFLIWTDHKN-LTYIREAKRLNSRQ-----ARWALFF 936
Query: 902 SKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSL 939
++ + + + PG NS DALSRQ D P L
Sbjct: 937 NRFDFTLS--YRPGSKNSKPDALSRQFGSLDSETTPEL 972
>gi|929567|emb|CAA27371.1| unnamed protein product [Drosophila melanogaster]
Length = 930
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Query: 302 NDRGHDIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAY 361
+ +G D N L I F + LN ++ + + I L K + T+DL Y
Sbjct: 205 DKKGTDASGNPNKRLVIDF--RKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGY 262
Query: 362 CHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVY 420
I +A R F G Y+ L FGL +A F + + V LRE+ G C VY
Sbjct: 263 HQIYLAEHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVY 319
Query: 421 LDDFLLASQDS 431
+DD ++ S++
Sbjct: 320 VDDVIIFSENE 330
>gi|91176529|gb|ABE26654.1| pol polyprotein [Nosema bombycis]
Length = 717
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LNS T + ++ L + Y + +D + Y I + R + F +KG
Sbjct: 4 DYRALNSVTTRDSYMSPRIDEVYDSLAEAKYFSVLDATSGYYQIAMEERDKNKTAFSFKG 63
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ + FGL +AP F + + + +E + YLDD ++ S+
Sbjct: 64 RLYEFNRMPFGLCNAPATFQRAMD--GIFRKENRKFVIPYLDDIIVYSK 110
>gi|2801517|gb|AAC82604.1| Prgag-pol [Drosophila melanogaster]
Length = 1463
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
N ++ + + LN ++ + + I L K + T+DL Y I +A
Sbjct: 660 FGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHD 719
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
R F G Y+ L FGL +A F + + V LRE+ G C VY+DD ++ S+
Sbjct: 720 REKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVYVDDVIIFSE 776
Query: 430 DS 431
+
Sbjct: 777 NE 778
>gi|339232884|ref|XP_003381559.1| putative integrase core domain protein [Trichinella spiralis]
gi|316979623|gb|EFV62387.1| putative integrase core domain protein [Trichinella spiralis]
Length = 481
Score = 46.2 bits (108), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
+ K + +T+DL AYC IPI R R + F G +YQ + FG+ + F ++ +
Sbjct: 71 ISKYHFFSTVDLKSAYCQIPINARDRPYTAFEAGGRLYQFKRIPFGVTNGVPCFQRVMD- 129
Query: 406 VAVLLRERGVRCLVYLDDFLL 426
+L E+ VY+D+ ++
Sbjct: 130 -NILPVEKLKDTFVYVDNVMI 149
>gi|38344714|emb|CAE05256.2| OSJNBb0115I09.18 [Oryza sativa Japonica Group]
Length = 1134
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 13/219 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 396 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 455
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS--------V 432
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ +
Sbjct: 456 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQSEEDHQHHLRL 513
Query: 433 VLKNQIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNA 492
VL L LS C +++ V + + T +T + +
Sbjct: 514 VLGKLREHQLYAKLS-KCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWNLKYIFTQSD 572
Query: 493 LLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQA 531
L ++ L ++ ++ I ++ PGK N + DALS+++
Sbjct: 573 LNLRQRRWLELIKDYDVGI--HYHPGKANVVTDALSQKS 609
>gi|336257168|ref|XP_003343548.1| hypothetical protein SMAC_09794 [Sordaria macrospora k-hell]
Length = 569
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 595 LHHLNDAQGLYG---------DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDY 645
L H+ ++Q +G DG +R V + + LNS ++ L Q++ L K
Sbjct: 229 LGHIRESQSPWGSPILFVPKKDGELRLVIDYRHLNSDTIKNRYPLPLIQEMRDRLGKATI 288
Query: 646 LATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFR---PSLSSPGVCPTIKLGRRLRE-R 701
+ DL+ A+ I + + F P+ +R L++ ++ L++
Sbjct: 289 FSKFDLTSAFSQIRMKKGEEIKTAFRTPLGHYEYRIMPQGLTNAPASFQARIDAVLKQFA 348
Query: 702 GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
G + Y+DD ++ S++ + + + L L G VN KKS+ +VD+LG
Sbjct: 349 GEFVMAYIDDIIVFSENEEQHQKHVHKVLAALEKAGLSVNPKKSEFH-KEQVDFLG 403
>gi|189234033|ref|XP_001807972.1| PREDICTED: similar to protease, reverse transcriptase, ribonuclease
H, integrase [Tribolium castaneum]
Length = 1300
Score = 46.2 bits (108), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 135/381 (35%), Gaps = 78/381 (20%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+GT+R + + LN+ + L + K + T+DL Y I + R
Sbjct: 475 ANGTIRLCVDYRKLNAVTKPDVYPLPRLDDLLHATGKIGCITTLDLQAGYWQIQVEPGDR 534
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER------GVRCLVYLDDFLLASQDP 719
F+ P + +R + G+ +RL ++ V L YLDD ++ S D
Sbjct: 535 DKTSFICPFGL--YRFTRMPFGLRNAPASFQRLMDKFKTGIPDVPILAYLDDLIIISPDG 592
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPS------HRVDYLGISWDTDLLQVRLPVDK 773
+ T L ++N K I S HR+ GI+ D ++ + +
Sbjct: 593 HTHIRHLRSTFDQLRRFQLRINRNKCLIGCSKVRYLGHRISPSGIAPDEKKVEA---IKQ 649
Query: 774 IPPLRDRLQTQALIE-LKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV 832
IPP R+ Q Q+ ++ WF + F V R + W
Sbjct: 650 IPPPRNLKQLQSFLQTCSWFRRFIDQFA----SVARPLSELTKKNASWK----------- 694
Query: 833 WTQAQRSWHINLKELFT----VRAAISSNPSL--------------VANHTVVLQSDNKT 874
W AQ LKE T +RAA + P + V + +L S +
Sbjct: 695 WGNAQDEAFTTLKEKLTTAPILRAADPTQPFILRTDSSAYALARRPVEYASRLLTSSERN 754
Query: 875 -------------VIAYIRKQGGLRSHALLAETKKLLLIMS---------KLNIHIVPY- 911
I+ R G S ++ + + L MS + + + PY
Sbjct: 755 YSTTEREALAIVWAISKFRGYVGENSTTVITDHQPLRWFMSLKTPTGRLARWALQLQPYN 814
Query: 912 ----FIPGKCNSLADALSRQA 928
+ PGK N++AD LSR A
Sbjct: 815 LVIEYTPGKANTIADFLSRPA 835
>gi|270000947|gb|EEZ97394.1| hypothetical protein TcasGA2_TC011220 [Tribolium castaneum]
Length = 1958
Score = 46.2 bits (108), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I+ + + LN ++ L N I L ++ Y +TIDL+ + I + + F
Sbjct: 580 IVIDYRKLNEQTVEDRYPLPNINDILDKLGRSQYFSTIDLASGFHQIEVDPNDVQKTAFT 639
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR---CLVYLDDFLLAS 428
+ Y+ + FGL +AP F ++ + V RG+ C+VYLDD ++ S
Sbjct: 640 VENGHYEFVRMPFGLKNAPSTFQRVMDNVL-----RGIVNNCCIVYLDDIIVFS 688
>gi|9628905|ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein banding virus]
Length = 708
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 145/383 (37%), Gaps = 72/383 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K LN + + L N +++ + + ++ D + + +A +
Sbjct: 330 GKARMVINYKKLNDHTKGDGYLLPNKEQLLQRIGGKTFYSSFDCKSGFWQVRLAPETIQL 389
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR-----CLVYLDDFLLASQDPIVL 722
F P + P I R + E C VY+DD ++ S+
Sbjct: 390 TAFSCPQGHYEWLVMPFGLKQAPAI-FQRHMDESLSNMYPQFCAVYVDDIIVFSKTEEEH 448
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVD---------- 772
+ L LG ++ KK+Q+ + +++LG+ + L+V+ +
Sbjct: 449 LGHVKIVLNRCKALGIVLSKKKAQLCKT-TINFLGLVIERGNLKVQSHIGLHLVAFPDQL 507
Query: 773 ---------------------KIPPLRDRLQTQALIELKWFYHNLTGFT----------- 800
KI LR LQ + E+ W + T
Sbjct: 508 SDRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRKIKSLVKTL 567
Query: 801 -PLHPPVP--RTFMSTDASDVGWGAMV------GNVSV----QGVWTQAQRSWHINLKEL 847
L+ P P + + DASD WGA++ G + G + A++++H N KE+
Sbjct: 568 PDLYNPSPEDKPIIECDASDDHWGAILKAKLPEGKEVICRYASGTFKPAEKNYHSNEKEI 627
Query: 848 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 907
++ AI + + + + ++++DN ++R + + K+ L+ ++ +
Sbjct: 628 LSIIKAIKAFRAYILPYKFLVRTDNTNAAYFVRTN-------IAGDYKQSRLVRWQMALR 680
Query: 908 IVPYFIP---GKCNSLADALSRQ 927
+ I G+ N LAD ++R+
Sbjct: 681 EYSFDIEHVSGQKNVLADIMTRE 703
>gi|341900902|gb|EGT56837.1| hypothetical protein CAEBREN_06252 [Caenorhabditis brenneri]
Length = 1417
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 153/399 (38%), Gaps = 90/399 (22%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH---RRF 667
R + ++LN+ T + + N +I + + ++D Q + IP+ H F
Sbjct: 604 RFTVDFRALNAVTTPVQSVIPNIHEILDLCAEQAFYTSLDFQQGFHQIPVEPAHCARTAF 663
Query: 668 LCFL-------IPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPI 720
C L +PM + SPG + + +++ R VY+DD ++ S D
Sbjct: 664 ACHLGTFEYLRMPMGLKG------SPGTFQRV-MNDLIKDMKARVFVYIDDMIITSPDAT 716
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG-ISWDTDLL---QVRLPVDKIPP 776
I + L + +G ++ +KSQ S ++ +LG I D +L + VD P
Sbjct: 717 QHLKDIHEVLTKIEIIGMKLKAEKSQFALS-QLRFLGFIVSDAGILTDPEKTKAVDDYPQ 775
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPV------PRTFMSTDASDVGW--------- 820
R + +A I L FY + F+ + P+ + F+ +D + +
Sbjct: 776 PRTVKEVRAFIGLASFYRRFIENFSKIAAPILELTKKDKEFIWSDECEQAFKQLKSAITK 835
Query: 821 --------------------GAMVGNVSVQG----------------VWTQAQRSW-HIN 843
G VG V +Q V+T A++++ I
Sbjct: 836 NPILVAPKLGRPFTIEVDSSGKGVGAVLLQAQDVDGKDRRVIAFASRVYTGAEKNYPAIE 895
Query: 844 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSK 903
L+ L A P + T ++ +D+ + A + ++ L+ K +I+ +
Sbjct: 896 LEALGLTYAVQQFRPYIDGAKTEII-TDHAPLKALLHRKD------LVGRLAKYQIILQE 948
Query: 904 LNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTES 942
+I I + PGK N + D LSR +H +TE
Sbjct: 949 YDITI--SYRPGKQNVVCDTLSR------YHPSKKMTEE 979
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH---RRFLCFL 377
+ ++LN+ T + + N +I + + ++D Q + IP+ H F C L
Sbjct: 608 DFRALNAVTTPVQSVIPNIHEILDLCAEQAFYTSLDFQQGFHQIPVEPAHCARTAFACHL 667
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
GT ++ + GL +P F ++ N L+++ R VY+DD ++ S D+
Sbjct: 668 --GT-FEYLRMPMGLKGSPGTFQRVMN---DLIKDMKARVFVYIDDMIITSPDATQHLKD 721
Query: 438 IFQTL 442
I + L
Sbjct: 722 IHEVL 726
>gi|56155209|gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]
Length = 1486
Score = 46.2 bits (108), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L N ++ L+ + +DL Y I I F
Sbjct: 613 DYRPLNKKTIKNKYPLPNINELFEQLKGAKVFSKLDLRMGYHQIRIREEDIPKTAFRTSF 672
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
Y+ T +SFGL +AP F +L N++ + V +YLDD L+ S+D
Sbjct: 673 GSYEYTVMSFGLPNAPPTFCRLMNYIFSPFKNEFV--FLYLDDILVFSEDE 721
>gi|427798471|gb|JAA64687.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 970
Score = 46.2 bits (108), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LN + L I L Y T+D S+ Y + + R R F
Sbjct: 199 LCVDYRRLNGVTRKDAYPLPTISSIVGNLGTARYFTTLDASKGYLQVRMDERDRCKTAFT 258
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+++ T + FGL +AP F +L + VL + C+ YLDD ++ SQ
Sbjct: 259 SHRGLFEFTRMPFGLCNAPATFQRLMD--RVLGEAKWSYCMCYLDDIVIYSQ 308
>gi|148533491|gb|ABQ84946.1| pol protein [Drosophila melanogaster]
Length = 1045
Score = 46.2 bits (108), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
N ++ + + LN ++ + + I L K + T+DL Y I +A
Sbjct: 242 FGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHD 301
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
R F G Y+ L FGL +A F + + V LRE+ G C VY+DD ++ S+
Sbjct: 302 REKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVYVDDVIIFSE 358
Query: 430 DS 431
+
Sbjct: 359 NE 360
>gi|148533487|gb|ABQ84943.1| pol protein [Drosophila melanogaster]
Length = 1045
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
N ++ + + LN ++ + + I L K + T+DL Y I +A
Sbjct: 242 FGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHD 301
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
R F G Y+ L FGL +A F + + V LRE+ G C VY+DD ++ S+
Sbjct: 302 REKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVYVDDVIIFSE 358
Query: 430 DS 431
+
Sbjct: 359 NE 360
>gi|1326016|emb|CAA86713.1| TY3-2 orfB [Saccharomyces cerevisiae]
Length = 1099
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 431 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 487
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 488 DLRFVN--VYLDDILIFSE 504
>gi|301622869|ref|XP_002940749.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 735
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 101/257 (39%), Gaps = 41/257 (15%)
Query: 186 DWHLLPSLTESVFQRWGIESCAALCDPESPGQQGGIHRCLLKKVGFQASVGLPAPASTSS 245
DW LT S+ Q WG + C LC P Q +L Q GLPAP S S
Sbjct: 76 DW-----LTCSILQ-WGTD-CQTLC--MKPVQ-------VLAATSLQ---GLPAPYSPFS 116
Query: 246 SIASLERRPGLICNSSSSVAEGLLVSRLEGAGNSPPNNGSRP-QIASDRSSNGLLSGN-D 303
I S + L + A L+ G+SPP P + ++ + N +
Sbjct: 117 DIFSKKAAETLPPHRPYDCAIDLI------PGSSPPKGRIYPLSLPETQAMEEYIKENLE 170
Query: 304 RGHDIGNLANTGLSIMF------NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYL--ATI 355
RG + + G F L+ +Y K + N +PL + D + ATI
Sbjct: 171 RGFIRPSCSPAGAGFFFVEKKDGGLRPCINYRGLNKITVKNRYPLPLISELFDRVKGATI 230
Query: 356 ----DLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
DL AY I I F + Y+ + FGL +AP F +L N + L
Sbjct: 231 FSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVIPFGLCNAPAVFQELVNDIFRDLL 290
Query: 412 ERGVRCLVYLDDFLLAS 428
R V +VYLDD L+ S
Sbjct: 291 GRSV--VVYLDDILIYS 305
>gi|270004778|gb|EFA01226.1| hypothetical protein TcasGA2_TC010553 [Tribolium castaneum]
Length = 659
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + + LN + K+ L N I L K+ Y T+DL+ + + + F
Sbjct: 323 LVVDYRKLNEKIVNDKYPLPNITDILDKLGKSIYFTTLDLASGFHQVQMNPDDIEKTAFS 382
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGV---RCLVYLDDFLLAS---QDS 431
+ Y+ + FGL +AP F ++ + + RG+ +C VYLDD ++ S ++
Sbjct: 383 TENGHYEYLRMPFGLKNAPATFQRVMDNIL-----RGIQNEKCFVYLDDIIIFSTSLEEH 437
Query: 432 VVLKNQIFQTL 442
+V ++F+ L
Sbjct: 438 IVRLKEVFERL 448
>gi|427797353|gb|JAA64128.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 913
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ ++ ++++L Y +P+A R + +Y+ + FGL +AP F ++ +
Sbjct: 265 LQGAEFFSSLELRSGYWQVPMAPSDRPKTALVTPDGLYEFNVMPFGLCNAPATFERMMD- 323
Query: 406 VAVLLRERGVRCLVYLDDFLLASQD 430
+VLL + CL YLDD ++ S D
Sbjct: 324 -SVLLGLKWKTCLFYLDDVVVFSPD 347
>gi|270000994|gb|EEZ97441.1| hypothetical protein TcasGA2_TC011272 [Tribolium castaneum]
Length = 1746
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I+ + + LN ++ L N I L ++ Y +TIDL+ + I + + F
Sbjct: 416 IVIDYRKLNEQTVEDRYPLPNINDILDKLGRSQYFSTIDLASGFHQIEVDPNDVQKTAFT 475
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR---CLVYLDDFLLAS 428
+ Y+ + FGL +AP F ++ + V RG+ C+VYLDD ++ S
Sbjct: 476 VENGHYEFVRMPFGLKNAPSTFQRVMDNVL-----RGIVNNCCIVYLDDIIVFS 524
>gi|495770|gb|AAA70219.1| unknown protein [Drosophila melanogaster]
Length = 1010
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
N ++ + + LN ++ + + I L K + T+DL Y I +A
Sbjct: 207 FGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHD 266
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
R F G Y+ L FGL +A F + + V LRE+ G C VY+DD ++ S+
Sbjct: 267 REKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVYVDDVIIFSE 323
Query: 430 DS 431
+
Sbjct: 324 NE 325
>gi|353233274|emb|CCD80629.1| KRAB-A domain-containing protein [Schistosoma mansoni]
Length = 1370
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L ++ + +T+DL+ Y + + + R+
Sbjct: 512 DSSLRLCIDYRRLNAITKRDSFPLPRIDTTLDAMRGACWFSTLDLASGYWQVEVRPQDRK 571
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWV--AVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L V ++L+ +CL+YLDD ++
Sbjct: 572 RTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQTVLHGLVLQ----KCLIYLDDIIV 623
>gi|308465965|ref|XP_003095239.1| hypothetical protein CRE_22625 [Caenorhabditis remanei]
gi|308245633|gb|EFO89585.1| hypothetical protein CRE_22625 [Caenorhabditis remanei]
Length = 2555
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 145/377 (38%), Gaps = 66/377 (17%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT R + + LN+ + +++ I + +DL Q + IP+ + R
Sbjct: 1629 DGTYRFTTDFRLLNAVTVKQNYQIPLISDIVDLASDGTFFTNLDLIQGFFQIPLRKEDRP 1688
Query: 667 FLCFLIPMDMSSF-RPSLSSPGVCPTIKLG-RRLRER-GVRCLVYLDDFLLASQDPIVLK 723
F P + R + G T + R+L+++ + YLDD L+ S
Sbjct: 1689 LTAFATPTGTYQYKRMPMGLCGAPHTFQTAVRQLQKKTKAKLFCYLDDLLIVSNTLEQHM 1748
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ---------VRLPVDKI 774
I + LQ + +G++V ++K + V +LG+ + ++ PV K
Sbjct: 1749 KDIEEVLQNIAEIGFKVKIEKCKFAQPE-VTFLGLLVGRNGVKPNPAKVKSIKEFPVPKT 1807
Query: 775 PP-LRD--------RLQTQALIELKWFYHNLT--------------GFTPLHP-----PV 806
P +R R + EL H+LT F L PV
Sbjct: 1808 PTGVRAFLGMTNYFRKFIRQFAELAAPLHDLTKKDQPFVWEEKHQESFDQLKAALCCTPV 1867
Query: 807 ---PRT----FMSTDASDVGWGAMVGNVSVQGV----------WTQAQRSWHINLKELFT 849
PR + +DAS + GA++ G T +R + E
Sbjct: 1868 LQAPRAGFPFVIESDASSIAVGALLLQTGEDGELHPIAYDSRKLTTTERKYPPIETEALA 1927
Query: 850 VRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIV 909
+ A+ + + + +V D++ + + + ++ L+ K +I+ ++++ I+
Sbjct: 1928 LAFAVKAFRTYILGSSVTAIVDHRPLTSLMHRRD------LIGRLAKYQIILQEMDLTII 1981
Query: 910 PYFIPGKCNSLADALSR 926
+ PGK NS+ DALSR
Sbjct: 1982 --YRPGKLNSVCDALSR 1996
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 15/123 (12%)
Query: 318 IMFNLKSLNSYVTTKKFKLIN------HQKIPLFLQKND------YLATIDLSQAYCHIP 365
I+ K +Y T F+L+N + +IPL D + +DL Q + IP
Sbjct: 1622 IVLVRKKDGTYRFTTDFRLLNAVTVKQNYQIPLISDIVDLASDGTFFTNLDLIQGFFQIP 1681
Query: 366 IARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFL 425
+ + R F YQ + GL AP F V L ++ + YLDD L
Sbjct: 1682 LRKEDRPLTAFATPTGTYQYKRMPMGLCGAPHTF---QTAVRQLQKKTKAKLFCYLDDLL 1738
Query: 426 LAS 428
+ S
Sbjct: 1739 IVS 1741
>gi|173088|gb|AAA35184.1| has homology to retroviral pol genes; ORF2 TYB3-2 (5' end of coding
region not precisely determined), partial [Saccharomyces
cerevisiae]
Length = 1221
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 431 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 487
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 488 DLRFVN--VYLDDILIFSE 504
>gi|345560713|gb|EGX43835.1| hypothetical protein AOL_s00212g2 [Arthrobotrys oligospora ATCC
24927]
Length = 1266
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 20/136 (14%)
Query: 59 PVPRTFMSTDASDVGWGAMVGNVSVQGVW----------TQAQRSWHINLKELFTVRAAI 108
P T M TDAS+ A++ G+W T A+ ++ I+ KEL +V A
Sbjct: 467 PALETRMETDASNFVCAAVLSQKHDDGLWHPVAYRSKKMTPAEHNYDIHDKELLSVIQAF 526
Query: 109 SS-NPSLVANHTVV-LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYF 166
L++ HT V + +D+K + ++ KQ LR + + +S+ + I F
Sbjct: 527 KEWERYLMSVHTQVHILTDHKNLEYFMTKQH-LRQRQV-----GWMEFLSRFDFKIT--F 578
Query: 167 IPGKCNSLADALSRQA 182
+PGK N+ ADAL+R++
Sbjct: 579 VPGKTNTKADALTRRS 594
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 20/136 (14%)
Query: 805 PVPRTFMSTDASDVGWGAMVGNVSVQGVW----------TQAQRSWHINLKELFTVRAAI 854
P T M TDAS+ A++ G+W T A+ ++ I+ KEL +V A
Sbjct: 467 PALETRMETDASNFVCAAVLSQKHDDGLWHPVAYRSKKMTPAEHNYDIHDKELLSVIQAF 526
Query: 855 SS-NPSLVANHTVV-LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYF 912
L++ HT V + +D+K + ++ KQ LR + + +S+ + I F
Sbjct: 527 KEWERYLMSVHTQVHILTDHKNLEYFMTKQH-LRQRQV-----GWMEFLSRFDFKIT--F 578
Query: 913 IPGKCNSLADALSRQA 928
+PGK N+ ADAL+R++
Sbjct: 579 VPGKTNTKADALTRRS 594
>gi|308481861|ref|XP_003103135.1| hypothetical protein CRE_25636 [Caenorhabditis remanei]
gi|308260511|gb|EFP04464.1| hypothetical protein CRE_25636 [Caenorhabditis remanei]
Length = 1775
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 146/379 (38%), Gaps = 65/379 (17%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+G +R V + + LN ++ + + N + + + D++Q + IP+ H+
Sbjct: 882 ANGEIRIVIDYRRLNLITRSRTYIMPNTIDVTEEASRGKLFSVFDIAQGFHTIPMHEAHK 941
Query: 666 RFLCFLIPMDMSSFR-PSLSSPGVCPTIKLGRRLRERGVR--CLVYLDDFLLASQDPIVL 722
F M + +R + G T + E+ ++Y+DD ++ S+D
Sbjct: 942 ERTAFCCHMGVFQYRYMPMGLKGAPDTFQRAMAEVEKQFTGTMILYVDDLIVVSRDEEEH 1001
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ----VRLPVDKIPP-- 776
+ + QL+ +G ++ +KSQI + ++ +LG + + +Q + K P
Sbjct: 1002 LRNLEEFFQLMINMGLKLKAEKSQIGRT-KISFLGFVIENNTIQPSGEKTEAIRKFPTPT 1060
Query: 777 ------------------LRD--------RLQTQALIELKWFYHNLTGFTP-----LHPP 805
++D TQ +E W F + PP
Sbjct: 1061 TLSEVKSFLGMSGYFRRFIKDYAIIVKPLTTLTQKDVEFNWGEEQEKAFEEVKQRLISPP 1120
Query: 806 V---PRT----FMSTDASDVGWGAMV-----GNVSVQGVWTQ-----AQRSWHINLKELF 848
+ PR M TDAS +G A++ + V ++ QR I + L
Sbjct: 1121 ILTTPRMDGDFEMHTDASKIGIAAVLLQKQDDKLKVIAYASRPTTPVEQRYAAIESEALA 1180
Query: 849 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
P + V+ +D++ + + + ++ S LL + I+ ++ I
Sbjct: 1181 ITWGLTHYRPYIFGKKVKVV-TDHQPLKSLLHRKEKEMSGRLL----RHQAIIQMYDVEI 1235
Query: 909 VPYFIPGKCNSLADALSRQ 927
V + PGK N LADALSRQ
Sbjct: 1236 V--YRPGKENPLADALSRQ 1252
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
AN + I+ + + LN ++ + + N + + + D++Q + IP+ H+
Sbjct: 882 ANGEIRIVIDYRRLNLITRSRTYIMPNTIDVTEEASRGKLFSVFDIAQGFHTIPMHEAHK 941
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F V+Q + GL AP F + +A + ++ ++Y+DD ++ S+D
Sbjct: 942 ERTAFCCHMGVFQYRYMPMGLKGAPDTFQRA---MAEVEKQFTGTMILYVDDLIVVSRDE 998
Query: 432 VV-LKN-----QIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKT 477
L+N Q+ + + L S+ GR V + + S KT
Sbjct: 999 EEHLRNLEEFFQLMINMGLKLKAEKSQIGRTKISFLGFVIENNTIQPSGEKT 1050
>gi|301614963|ref|XP_002936955.1| PREDICTED: hypothetical protein LOC100494179 [Xenopus (Silurana)
tropicalis]
Length = 571
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 64 FMSTDASDVGWGAMVGNVSVQGVWTQAQ--RSW-------HINLKELFTVRAAISSNPSL 114
F + A G+GA QG W A R W ++ L ELF + A+
Sbjct: 424 FFTDAAGSGGFGAYF-----QGKWCAAPWPREWTETKLTSNLTLLELFPIIVAMELWGPQ 478
Query: 115 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 174
+AN VV +DN +V+ I S +L K L+L +LN+ +PG N +
Sbjct: 479 LANQAVVFYTDNMSVVMAINNLTS-GSRPVLCLLKHLVLRCLQLNVKFGAKHVPGYTNEI 537
Query: 175 ADALSR 180
AD+LSR
Sbjct: 538 ADSLSR 543
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 810 FMSTDASDVGWGAMVGNVSVQGVWTQAQ--RSW-------HINLKELFTVRAAISSNPSL 860
F + A G+GA QG W A R W ++ L ELF + A+
Sbjct: 424 FFTDAAGSGGFGAYF-----QGKWCAAPWPREWTETKLTSNLTLLELFPIIVAMELWGPQ 478
Query: 861 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 920
+AN VV +DN +V+ I S +L K L+L +LN+ +PG N +
Sbjct: 479 LANQAVVFYTDNMSVVMAINNLTS-GSRPVLCLLKHLVLRCLQLNVKFGAKHVPGYTNEI 537
Query: 921 ADALSR 926
AD+LSR
Sbjct: 538 ADSLSR 543
>gi|301605558|ref|XP_002932423.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1406
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 100/257 (38%), Gaps = 41/257 (15%)
Query: 186 DWHLLPSLTESVFQRWGIESCAALCDPESPGQQGGIHRCLLKKVGFQASVGLPAPASTSS 245
DW LT S+ Q WG + C LC P Q L Q GLPAP +
Sbjct: 108 DW-----LTSSILQ-WGTD-CQTLC--MKPVQA-------LAATSLQ---GLPAPYFPFA 148
Query: 246 SIASLERRPGLICNSSSSVAEGLLVSRLEGAGNSPPNNGSRP-QIASDRSSNGLLSGN-D 303
+ S + L + A L+ +G+SPP P + ++ + N +
Sbjct: 149 DVFSKKAAETLPPHRPYDCAIDLI------SGSSPPKGRIYPLSLPETQAMEEYIKENLE 202
Query: 304 RGHDIGNLANTGLSIMF------NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYL--ATI 355
RG + + G F L+ Y KF + N +PL + D + ATI
Sbjct: 203 RGFIRSSCSPAGAGFFFVEKKDGGLRPCIDYRGLNKFTVKNRYPLPLISELFDRVKGATI 262
Query: 356 ----DLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
DL AY I I F + Y+ + FGL +AP F +L N + L
Sbjct: 263 FSKLDLRGAYNLIRIREGDEWKTAFNTRDGHYEYLVMPFGLCNAPAVFQELVNDIFRDLL 322
Query: 412 ERGVRCLVYLDDFLLAS 428
R V +VYLDD L+ S
Sbjct: 323 GRSV--VVYLDDILIYS 337
>gi|317138877|ref|XP_003189097.1| hypothetical protein AOR_1_1350184 [Aspergillus oryzae RIB40]
Length = 1605
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ ++ L ++ L + Y +DL AY I I +
Sbjct: 639 DGSLRLCVDYRGLNAVTVKNRYPLPRIDELMDRLVEAKYFTKLDLRDAYHRIRIQKGDEW 698
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ T + FGL +AP F A ++ + +L + C+VYLDD L+ SQ
Sbjct: 699 KTAFRTRYGHFEYTVMPFGLCNAPATFQAYINEAMKGILDD---YCVVYLDDILIYSQ 753
>gi|113911753|gb|ABI48306.1| pol protein [Drosophila melanogaster]
Length = 1010
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
N ++ + + LN ++ + + I L K + T+DL Y I +A
Sbjct: 207 FGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHD 266
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
R F G Y+ L FGL +A F + + V LRE+ G C VY+DD ++ S+
Sbjct: 267 REKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVYVDDVIIFSE 323
Query: 430 DS 431
+
Sbjct: 324 NE 325
>gi|189241513|ref|XP_001808190.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 720
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ Y +++DL + H+ +A+ ++ F+ ++ + FGL +AP+ F +
Sbjct: 90 LQNKRYFSSLDLKNGFYHVKMAKDSIKYTSFVTPLGQFEFLKMPFGLTNAPKVFQRCVQI 149
Query: 406 V-AVLLRERGVRCLVYLDDFLLASQ 429
V L+R+ + LVYLDD L+A++
Sbjct: 150 VFDDLIRDNKI--LVYLDDILVATE 172
>gi|113911749|gb|ABI48303.1| pol protein [Drosophila melanogaster]
Length = 1010
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
N ++ + + LN ++ + + I L K + T+DL Y I +A
Sbjct: 207 FGNPNKRLVIDFRKLNERTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHD 266
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
R F G Y+ L FGL +A F + + V LRE+ G C VY+DD ++ S+
Sbjct: 267 REKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVYVDDVIIFSE 323
Query: 430 DS 431
+
Sbjct: 324 NE 325
>gi|40786849|gb|AAR89939.1| polymerase protein [Sheldgoose hepatitis B virus]
Length = 785
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P L + FR + G+ P T LG + R
Sbjct: 443 SLDLSQAFYHLPFNPASSSRLAISDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 502
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P H + +LG
Sbjct: 503 FNVWTFTYMDDFLLCHPNARHLHAISNAVCTFLQELGVRINFDKTTPSPVHEIRFLGYEI 562
Query: 761 DTDLLQV 767
D+ +++
Sbjct: 563 DSTYMKI 569
>gi|308462401|ref|XP_003093484.1| hypothetical protein CRE_26772 [Caenorhabditis remanei]
gi|308250141|gb|EFO94093.1| hypothetical protein CRE_26772 [Caenorhabditis remanei]
Length = 518
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLY----KGTVYQRTCLSFGLASAPQAFAQLSNWV 406
+ AT D Y H+ I FL F K Y+ L FGL++AP F ++ +
Sbjct: 3 FAATFDFKSGYHHVKIEENSSEFLAFSLTDPPKAPFYKYRALPFGLSTAPWLFTKIFRPI 62
Query: 407 AVLLRERGVRCLVYLDDFLLASQ 429
R G++ +Y+DD L+ ++
Sbjct: 63 VGKWRRDGIKIWLYIDDGLIVAE 85
>gi|189236286|ref|XP_001815236.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1463
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ T+DL+ Y IP+A F+ Y+ + FGLA+AP F + N V L
Sbjct: 691 FFTTLDLASGYYQIPMATESIPKTAFVTPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPL 750
Query: 411 RERGVRCLVYLDDFLLASQD 430
R + C Y+DD L+ S+D
Sbjct: 751 RFQTAYC--YIDDLLIPSKD 768
>gi|536873|gb|AAA98435.1| POL3 [Saccharomyces cerevisiae]
Length = 1270
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 405 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 461
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 462 DLRFVN--VYLDDILIFSE 478
>gi|330916725|ref|XP_003297538.1| hypothetical protein PTT_07967 [Pyrenophora teres f. teres 0-1]
gi|311329738|gb|EFQ94366.1| hypothetical protein PTT_07967 [Pyrenophora teres f. teres 0-1]
Length = 183
Score = 45.8 bits (107), Expect = 0.12, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L K+ Y + +D+ A+ I I H+ F+ +YQ T + FG+ ++P F N
Sbjct: 5 LSKSRYFSKVDVIAAFNKIRIKEEHKHLSAFITPYGLYQYTVMPFGMCNSPGTFQAYIN- 63
Query: 406 VAVLLRERGVRCLVYLDDFLLASQ 429
VL C+ YLDD ++ S+
Sbjct: 64 -DVLHEYLDEFCMAYLDDVIIFSE 86
Score = 40.0 bits (92), Expect = 6.1, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 640 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFR----PSLSSPGVCPTI--- 692
L K+ Y + +D+ A+ I I H+ F+ P + + +SPG
Sbjct: 5 LSKSRYFSKVDVIAAFNKIRIKEEHKHLSAFITPYGLYQYTVMPFGMCNSPGTFQAYIND 64
Query: 693 KLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHR 752
L L E C+ YLDD ++ S+ + ++Q + L G +++ KS+ + +
Sbjct: 65 VLHEYLDEF---CMAYLDDVIIFSETLDQHEKHLVQVVSRLADAGLPMDILKSEFLKT-E 120
Query: 753 VDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQALIELKWF 792
V +LG+ D +++ +K+ ++D Q+L +++ F
Sbjct: 121 VKFLGLIITAD--GIKMDPEKVSAIQDWKLPQSLKDVQAF 158
>gi|401880702|gb|EJT45020.1| retrotransposon nucleocapsid protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1785
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 333 KFKLINHQKIPLFLQKND------YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRT 386
K + N +PL L+ D Y TIDL AY + IA F K +++
Sbjct: 262 KVTIKNRNPLPLILEMLDRLSTAKYYTTIDLRNAYYQVRIAEGDEWKTAFRTKYGLFEYL 321
Query: 387 CLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+ FGL +AP F L N V + ++ V + YLDD L+ S
Sbjct: 322 VMPFGLTNAPSTFQHLINHVFHDMLDKFV--IAYLDDILIFS 361
>gi|130583|sp|P10401.1|POLY_DROME RecName: Full=Retrovirus-related Pol polyprotein from transposon
gypsy; Includes: RecName: Full=Reverse transcriptase;
Includes: RecName: Full=Endonuclease
Length = 1035
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 311 LANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRH 370
N ++ + + LN ++ + + I L K + T+DL Y I +A
Sbjct: 232 FGNPNKRLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHD 291
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
R F G Y+ L FGL +A F + + V LRE+ G C VY+DD ++ S+
Sbjct: 292 REKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDV---LREQIGKICYVYVDDVIIFSE 348
Query: 430 DS 431
+
Sbjct: 349 NE 350
>gi|62240430|gb|AAX77403.1| pol protein [Human T-lymphotropic virus 4]
Length = 220
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G R + +L++ N+ TT + Q +L TIDL+ A+ IP+ +R +
Sbjct: 21 NGKWRFIHDLRATNAITTTLASPSPGPPDLTSLPQALPHLQTIDLTDAFFQIPLPKRFQP 80
Query: 667 FLCFLIPMDMS--------------SFR--PSLSSPGVCPTIKLGRRLRERGVRCLVYLD 710
+ F IP ++ F+ P+L + + R+ V + Y+D
Sbjct: 81 YFAFTIPQPLNHGPGSRYAWTVLPQGFKNSPTLFEQQLASVLGPARKAFPTSV-IVQYMD 139
Query: 711 DFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
D LLA L T QLL+ G V+ +K+Q P ++ +LG
Sbjct: 140 DILLACPSQHELDQLATLTAQLLSSHGLPVSQEKTQRTPG-KIHFLG 185
>gi|294892413|ref|XP_002774051.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239879255|gb|EER05867.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 1024
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + ++LN T+ + + + L +T+DL Y IP+ + +R
Sbjct: 304 NGKVRMCIDYRNLNKACHTEAYPVPRPDDVQEHLAGARVFSTLDLRSGYWQIPVRKEDQR 363
Query: 373 FLCFLYKG--TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y+ + FGLASAP F +L + A+L VR VYLDD L+ S+
Sbjct: 364 KTAFCPGPGFPLYEWVMMPFGLASAPATFQRLMD--AILEHLPFVR--VYLDDVLIFSR 418
>gi|388856666|emb|CCF49783.1| related to Gag-pol polyprotein [Ustilago hordei]
Length = 1106
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN + L ++ L+K +DL AY I IA+
Sbjct: 222 DGGLRLCVDYRGLNEITVKNRAPLPLIEEQLFLLRKARIYTKLDLRAAYNLIRIAKGDEW 281
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE-RGVRCLVYLDDFLLAS 428
F + +Y+ + FGLA+AP A +++ + R+ G+ +VYLDDFL+ S
Sbjct: 282 KTAFGTQLGLYEYLVMPFGLANAP---AHFQSFINDIFRDIIGIYVVVYLDDFLIFS 335
>gi|60593115|gb|AAX28844.1| reverse transcriptase [Drosophila melanogaster]
Length = 1088
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + + LN + ++ + N I L K Y +T+DL+ + I + F
Sbjct: 259 LVIDYRKLNEKTISDRYPIPNIADILDRLGKAKYFSTLDLASGFHQIEMNPDDTPKTAFT 318
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS 428
+G Y+ + FGL +AP F + + N L+ G CLVYLDD ++ S
Sbjct: 319 VEGGHYEFIRMPFGLKNAPATFQRVMDNIFGDLI---GTICLVYLDDIIIFS 367
>gi|291225955|ref|XP_002732962.1| PREDICTED: Gap-Pol polyprotein-like [Saccoglossus kowalevskii]
Length = 1268
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 148/352 (42%), Gaps = 39/352 (11%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT+R + + +N+ + L + L + +++DL Y I +A
Sbjct: 431 DGTVRLCIDYRKINARTIRDSYALPRIDESLDALGGARFFSSLDLKSGYWQIGMAEEDIE 490
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR------CLVYLDDFLLASQDPI 720
F+ P+ + ++ S G+ + +R E+ + CLVYLDD ++ +
Sbjct: 491 KTAFVTPLGF--WESTVMSMGLTGSPATFQRCIEKCLNDLNLNICLVYLDDIIVFGKTFE 548
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG-----ISWDTDLLQVRLPVDKIP 775
+++ L+ L G +V K Q++ HRV+YLG +TD + R +
Sbjct: 549 EHLDRLATVLKRLHEKGLKVKPSKCQLL-RHRVNYLGHVVTEQGIETDPEKTRALREWKV 607
Query: 776 PLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMS-----TDASDVGWGAMV--GNVS 828
P + Q L ++ + G+ + P+ + + AS G GA++ G
Sbjct: 608 PTSGKQVKQFLGFCGYYRKYVEGYARIARPLDDLTVGLPTKHSHASCTGLGAVLYQGEGK 667
Query: 829 VQGV-------WTQAQRSWHINLKELFTVRAAISS--NPSLVANHTVVLQSDNKTVIAYI 879
+ V T ++R++ + E ++ A+++ + L N V+ +N + Y+
Sbjct: 668 EKRVVMYASRGLTASERNYPAHKLEFLALKWAVTTKFHDYLYGNKFTVVTDNNP--LTYV 725
Query: 880 RKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP 931
+H L A + + ++ + ++ + PGK N+ AD LSR+ P
Sbjct: 726 ----DWTAH-LDATGHRWMAALALYDFRLI--YRPGKQNADADGLSRKCHGP 770
>gi|21743221|emb|CAD40076.1| OSJNBa0085C10.29 [Oryza sativa Japonica Group]
Length = 626
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I R
Sbjct: 366 DGSMRMCVDYRSLNKVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSEYHQLKIRPRDIP 425
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 426 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDKFV--VVFIDDILIYSKDE 482
>gi|6322110|ref|NP_012184.1| gag-pol fusion protein [Saccharomyces cerevisiae S288c]
gi|285812571|tpg|DAA08470.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288c]
Length = 1498
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 708 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 764
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 765 DLRFVN--VYLDDILIFSE 781
>gi|308495826|ref|XP_003110101.1| hypothetical protein CRE_06372 [Caenorhabditis remanei]
gi|308244938|gb|EFO88890.1| hypothetical protein CRE_06372 [Caenorhabditis remanei]
Length = 2108
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 146/379 (38%), Gaps = 65/379 (17%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+G +R V + + LN ++ + + N + + + D++Q + IP+ H+
Sbjct: 1215 ANGEIRIVIDYRRLNLITRSRTYIMPNTIDVTEEASRGKLFSVFDIAQGFHTIPMHEAHK 1274
Query: 666 RFLCFLIPMDMSSFR-PSLSSPGVCPTIKLGRRLRERGVR--CLVYLDDFLLASQDPIVL 722
F M + +R + G T + E+ ++Y+DD ++ S+D
Sbjct: 1275 ERTAFCCHMGVFQYRYMPMGLKGAPDTFQRAMAEVEKQFTGTMILYVDDLIVVSRDEEEH 1334
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ----VRLPVDKIPP-- 776
+ + QL+ +G ++ +KSQI + ++ +LG + + +Q + K P
Sbjct: 1335 LRNLEEFFQLMINMGLKLKAEKSQIGRT-KISFLGFVIENNTIQPSGEKTEAIRKFPTPT 1393
Query: 777 ------------------LRD--------RLQTQALIELKWFYHNLTGFTP-----LHPP 805
++D TQ +E W F + PP
Sbjct: 1394 TLSEVKSFLGMSGYFRRFIKDYAIIVKPLTTLTQKDVEFNWGEEQEKAFEEVKQRLISPP 1453
Query: 806 V---PRT----FMSTDASDVGWGAMV-----GNVSVQGVWTQ-----AQRSWHINLKELF 848
+ PR M TDAS +G A++ + V ++ QR I + L
Sbjct: 1454 ILTTPRMDGDFEMHTDASKIGIAAVLLQKQDDELKVIAYASRPTTPVEQRYAAIESEALA 1513
Query: 849 TVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
P + V+ +D++ + + + ++ S LL + I+ ++ I
Sbjct: 1514 ITWGLTHYRPYIFGKKVKVV-TDHQPLKSLLHRKEKEMSGRLL----RHQAIIQMYDVEI 1568
Query: 909 VPYFIPGKCNSLADALSRQ 927
V + PGK N LADALSRQ
Sbjct: 1569 V--YRPGKENPLADALSRQ 1585
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
AN + I+ + + LN ++ + + N + + + D++Q + IP+ H+
Sbjct: 1215 ANGEIRIVIDYRRLNLITRSRTYIMPNTIDVTEEASRGKLFSVFDIAQGFHTIPMHEAHK 1274
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F V+Q + GL AP F + +A + ++ ++Y+DD ++ S+D
Sbjct: 1275 ERTAFCCHMGVFQYRYMPMGLKGAPDTFQRA---MAEVEKQFTGTMILYVDDLIVVSRDE 1331
Query: 432 VV-LKN-----QIFQTLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKT 477
L+N Q+ + + L S+ GR V + + S KT
Sbjct: 1332 EEHLRNLEEFFQLMINMGLKLKAEKSQIGRTKISFLGFVIENNTIQPSGEKT 1383
>gi|146291076|sp|Q7LHG5.2|YI31B_YEAST RecName: Full=Transposon Ty3-I Gag-Pol polyprotein; AltName:
Full=Gag3-Pol3; AltName: Full=Transposon Ty3-2 TYA-TYB
polyprotein; Contains: RecName: Full=Capsid protein;
Short=CA; AltName: Full=p24; Contains: RecName:
Full=Spacer peptide p3; Contains: RecName:
Full=Nucleocapsid protein p11; Short=NC; Contains:
RecName: Full=Ty3 protease; Short=PR; AltName: Full=p16;
Contains: RecName: Full=Spacer peptide J; Contains:
RecName: Full=Reverse transcriptase/ribonuclease H;
Short=RT; Short=RT-RH; AltName: Full=p55; Contains:
RecName: Full=Integrase p52; Short=IN; Contains:
RecName: Full=Integrase p49; Short=IN
Length = 1498
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 708 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 764
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 765 DLRFVN--VYLDDILIFSE 781
>gi|308473068|ref|XP_003098760.1| hypothetical protein CRE_03331 [Caenorhabditis remanei]
gi|308268194|gb|EFP12147.1| hypothetical protein CRE_03331 [Caenorhabditis remanei]
Length = 1679
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSN 404
L +N + T+DL Y IP+ + F YQ + FGLA++P F A +
Sbjct: 925 LGENKWFTTLDLMAGYWQIPMEEGSKEKTAFAVLNEQYQFEVMPFGLATSPAIFQAAMEQ 984
Query: 405 WVAVLLRERGVRCLVYLDDFLLAS 428
+ L+ G VY+DD L+AS
Sbjct: 985 VLGDLI---GKSVFVYIDDILIAS 1005
>gi|1945323|emb|CAA97115.1| TY3B [Saccharomyces cerevisiae]
gi|1945324|emb|CAA97117.1| TY3B [Saccharomyces cerevisiae]
Length = 1547
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 682 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 738
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 739 DLRFVN--VYLDDILIFSE 755
>gi|6321547|ref|NP_011624.1| gag-pol fusion protein [Saccharomyces cerevisiae S288c]
gi|285812302|tpg|DAA08202.1| TPA: gag-pol fusion protein [Saccharomyces cerevisiae S288c]
Length = 1547
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 682 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 738
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 739 DLRFVN--VYLDDILIFSE 755
>gi|134034966|sp|Q99315.3|YG31B_YEAST RecName: Full=Transposon Ty3-G Gag-Pol polyprotein; AltName:
Full=Gag3-Pol3; AltName: Full=Transposon Ty3-1 TYA-TYB
polyprotein; Contains: RecName: Full=Capsid protein;
Short=CA; AltName: Full=p24; Contains: RecName:
Full=Spacer peptide p3; Contains: RecName:
Full=Nucleocapsid protein p11; Short=NC; Contains:
RecName: Full=Ty3 protease; Short=PR; AltName: Full=p16;
Contains: RecName: Full=Spacer peptide J; Contains:
RecName: Full=Reverse transcriptase/ribonuclease H;
Short=RT; Short=RT-RH; AltName: Full=p55; Contains:
RecName: Full=Integrase p61; Short=IN; Contains:
RecName: Full=Integrase p58; Short=IN
Length = 1547
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
T+DL Y IP+ + R F+ Y+ T + FGL +AP FA+ ++A R
Sbjct: 682 FTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR---YMADTFR 738
Query: 412 E-RGVRCLVYLDDFLLASQ 429
+ R V VYLDD L+ S+
Sbjct: 739 DLRFVN--VYLDDILIFSE 755
>gi|326666839|ref|XP_003198393.1| PREDICTED: hypothetical protein LOC100331523 [Danio rerio]
Length = 1440
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + Y++T+DL++ Y +P++ + F +Q L FGL AP F +L +
Sbjct: 989 LGRARYISTLDLTKGYWQVPLSEEAKAKTAFSTPSGHWQYRTLPFGLHGAPATFQRLMD- 1047
Query: 406 VAVLLRERGVRCLVYLDDFLLASQ 429
++LR YLDD ++ S+
Sbjct: 1048 --IVLRPHQAYAAAYLDDVVIHSE 1069
>gi|390363533|ref|XP_003730394.1| PREDICTED: uncharacterized protein K02A2.6-like [Strongylocentrotus
purpuratus]
Length = 1027
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 294 SSNGLLSGNDRGHDIGNLA-----NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQK 348
S+G++ D + NL N L + +L+++N + K+ L ++
Sbjct: 464 ESDGIIERIDSSPWVSNLVIARRKNGDLRLCVDLRAVNKAIIPDKYPLPTMNELSASFHG 523
Query: 349 NDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAV 408
+ +D+ ++Y +P+A + R F ++Q + +GL SAP AF ++ + +V
Sbjct: 524 AKVFSKLDMRRSYLQVPLAEQSRHLTAFNTHIGMFQYRRMPYGLNSAPSAFQKIVS--SV 581
Query: 409 LLRERGVRCLVYLDDFLLASQD 430
L G L LDD ++ +D
Sbjct: 582 LAGIEGT--LNLLDDVVVFGED 601
>gi|301614961|ref|XP_002936954.1| PREDICTED: hypothetical protein LOC100494000 [Xenopus (Silurana)
tropicalis]
Length = 965
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 87 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 146
WT+ + + ++ L ELF + A+ +AN VV +DN +V+ I S +L
Sbjct: 845 WTETKLTSNLTLLELFPIIVAMELWGPQLANQAVVFYTDNMSVVMAINNLTS-GSRPVLC 903
Query: 147 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
K L+L +LN+ +PG N +AD+LSR
Sbjct: 904 LLKHLVLRCLQLNVKFGAKHVPGYTNEIADSLSR 937
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 833 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 892
WT+ + + ++ L ELF + A+ +AN VV +DN +V+ I S +L
Sbjct: 845 WTETKLTSNLTLLELFPIIVAMELWGPQLANQAVVFYTDNMSVVMAINNLTS-GSRPVLC 903
Query: 893 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
K L+L +LN+ +PG N +AD+LSR
Sbjct: 904 LLKHLVLRCLQLNVKFGAKHVPGYTNEIADSLSR 937
>gi|156341945|ref|XP_001620826.1| hypothetical protein NEMVEDRAFT_v1g222669 [Nematostella vectensis]
gi|156206193|gb|EDO28726.1| predicted protein [Nematostella vectensis]
Length = 161
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 353 ATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGL 392
A +DL AY +PI R ++RFL FL+K ++ + +C+ FGL
Sbjct: 14 AKLDLKDAYLTVPIDRDYQRFLRFLWKDSILEFSCVPFGL 53
>gi|219552911|ref|YP_002455786.1| polymerase [Human T-lymphotropic virus 4]
gi|150251023|gb|ABR68001.1| polymerase [Human T-lymphotropic virus 4]
Length = 908
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 18/167 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+G R + +L++ N+ TT + Q +L TIDL+ A+ IP+ +R +
Sbjct: 81 NGKWRFIHDLRATNAITTTLASPSPGPPDLTSLPQALPHLQTIDLTDAFFQIPLPKRFQP 140
Query: 667 FLCFLIPMDMS--------------SFR--PSLSSPGVCPTIKLGRRLRERGVRCLVYLD 710
+ F IP ++ F+ P+L + + R+ V + Y+D
Sbjct: 141 YFAFTIPQPLNHGPGSRYAWTVLPQGFKNSPTLFEQQLASVLGPARKAFPTSV-IVQYMD 199
Query: 711 DFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
D LLA L T QLL+ G V+ +K+Q P ++ +LG
Sbjct: 200 DILLACPSQHELDQLATLTAQLLSSHGLPVSQEKTQRTPG-KIHFLG 245
>gi|406356620|ref|YP_006732334.1| polyprotein [Dahlia mosaic virus]
gi|32351193|gb|AAP75615.1| polyprotein [Dahlia mosaic virus]
gi|404435874|gb|AFR69283.1| polyprotein [Dahlia mosaic virus]
Length = 609
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 104/273 (38%), Gaps = 51/273 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K LN L N Q++ L+ ++ D + + + + ++
Sbjct: 313 GKKRMVVNYKKLNEVTIGDSHNLPNMQELITLLRGKSIFSSFDCKSGFWQVFLDQESQKL 372
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLASQDPIVLK 723
F P +R P+I R ++ RG+ CLVY+DD ++ S
Sbjct: 373 TAFTCPQGHFQWRVVPFGLKQAPSI-FQRHMQNALRGLEDYCLVYVDDIIVFSNSEKEHY 431
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT-----------------DLLQ 766
+ +L L+ + LG ++ KK+ + ++++LG+ D D L+
Sbjct: 432 DHVLSVLRRVESLGIILSEKKANLF-KEKINFLGLEIDRGTHTPQNHILEHLHGFPDRLE 490
Query: 767 VRLPVDK-----------IPPLRDR---LQTQALIELKWFY------------HNLTGFT 800
+ + + IP L ++ LQ + + W + L F
Sbjct: 491 DKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWSWSQSDTDYIKKIKKGLINFP 550
Query: 801 PLHPPVPRT--FMSTDASDVGWGAMVGNVSVQG 831
L+ P P + TDASD WG ++ + +G
Sbjct: 551 KLYLPKPEDSLIIETDASDNFWGGVLKAQTTEG 583
>gi|432921409|ref|XP_004080143.1| PREDICTED: uncharacterized protein LOC101157890 [Oryzias latipes]
Length = 1871
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLIN-HQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 376
+ +L+++N T + + H+ + + + IDL+ A+ IP+ R F
Sbjct: 1002 MAHDLRAVNDVTITPVLPVPDPHRMLSTLTPQCVWFTAIDLANAFFCIPLHENSRHLFAF 1061
Query: 377 LYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS 428
YKG Q T L G ++P F Q L + + G L+Y+DD LLA+
Sbjct: 1062 QYKGVRLQYTRLPQGFKNSPGIFNQCLKSCLQDFELPGGCVLLMYVDDLLLAA 1114
>gi|254587271|emb|CAX83692.1| Gap-Pol polyprotein [Schistosoma japonicum]
Length = 1350
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + A +DL+ AY + + R L ++Q T L FG+ +AP F QL +
Sbjct: 569 LNGGSFFAKLDLADAYLQVEVEPTCRELLTINTHRGLFQYTRLPFGVKTAPAIFQQLMD- 627
Query: 406 VAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
+LL GV VYLDD L+ ++ L N++ L
Sbjct: 628 -TILLDLTGV--AVYLDDILVVAESPNELYNRLATVL 661
>gi|241957848|ref|XP_002421643.1| reverse transcriptase (fragment), putative [Candida dubliniensis
CD36]
gi|223644988|emb|CAX39580.1| reverse transcriptase (fragment), putative [Candida dubliniensis
CD36]
Length = 403
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
AN + + + + LN F L N +++ + ++ + Y ++IDL Q Y + I +
Sbjct: 246 ANGEVRLCNDFRGLNKLTIADHFHLPNMEELLMEVKNSTYYSSIDLCQGYHQVLINEADK 305
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFLLASQD 430
F + + FGL +AP +F ++ V RE L+YLDD ++ S++
Sbjct: 306 EKTAFHTPFGSFHWVVMPFGLINAPASFQRMMEQV---FREYNHDFMLIYLDDLIIYSKN 362
>gi|326665908|ref|XP_003198150.1| PREDICTED: hypothetical protein LOC100535957 [Danio rerio]
Length = 1427
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + Y++T+DL++ Y +P++ + F +Q L FGL AP F +L +
Sbjct: 958 LGRARYISTLDLTKGYWQVPLSEEAKAKTAFSTPSGHWQYRTLPFGLHGAPATFQRLMD- 1016
Query: 406 VAVLLRERGVRCLVYLDDFLLASQ 429
++LR YLDD ++ S+
Sbjct: 1017 --IVLRPHQAYAAAYLDDVVIHSE 1038
>gi|270016078|gb|EFA12526.1| hypothetical protein TcasGA2_TC003738 [Tribolium castaneum]
Length = 814
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLY-KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+T+DL Y IP+ RR+ F G +YQ + FGL AP F +L VL
Sbjct: 455 FSTLDLRSGYWQIPMEDESRRYTAFTTPDGALYQFCVMPFGLKGAPGTFQRLMTQ-EVLP 513
Query: 411 RERGVRCLVYLDDFLLASQD 430
LVYLDD ++ S D
Sbjct: 514 GYLHKFALVYLDDIVVFSND 533
>gi|427798385|gb|JAA64644.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1319
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N L + + LN T + L ++ + +++DL Y I +A +
Sbjct: 519 NGSLRFCVDYRQLNKCTTPDSYPLPRIDDAVDTVRHCKFFSSLDLRAGYWQINVAEEDKC 578
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y+ + FGL +AP F + N V L+ + C+VYLDD L+ +
Sbjct: 579 KTAFRTPSGLYEFNRMPFGLRTAPSTFQRAMNSVLGPLKNQA--CVVYLDDILVVGK 633
>gi|189236298|ref|XP_001815359.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1286
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L P+F T+DL+ Y IP+A F+
Sbjct: 670 MCVDYRQLNSKTIKDRFPL------PVF-------TTLDLASGYYQIPMATESIPKTAFV 716
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 717 TPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 767
>gi|31432176|gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 589 DSSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIP 648
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 649 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 705
>gi|330944689|ref|XP_003306403.1| hypothetical protein PTT_19543 [Pyrenophora teres f. teres 0-1]
gi|311316099|gb|EFQ85501.1| hypothetical protein PTT_19543 [Pyrenophora teres f. teres 0-1]
Length = 318
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 59 PVPRTFMSTDASDVGWGAMVGNVSV----------QGVWTQAQRSWHINLKELFTVRAAI 108
P F++ D GWGA++ + GVW+ ++R+W E + +
Sbjct: 22 PFRAIFVAVDGLKKGWGAVLMQLDALGRRHPIRYESGVWSISERNWDSGKHECKALLLTL 81
Query: 109 SSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIP 168
S + +++D KT++A +++ AL+ + L +++ + IV +P
Sbjct: 82 KKFRSYLYGVRFTVETDAKTLVAQLQRSATDLPGALVT---RWLALLNLWDFDIV--HVP 136
Query: 169 GKCNSLADALSRQ 181
GK N +ADALSR+
Sbjct: 137 GKKNVVADALSRR 149
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 805 PVPRTFMSTDASDVGWGAMVGNVSV----------QGVWTQAQRSWHINLKELFTVRAAI 854
P F++ D GWGA++ + GVW+ ++R+W E + +
Sbjct: 22 PFRAIFVAVDGLKKGWGAVLMQLDALGRRHPIRYESGVWSISERNWDSGKHECKALLLTL 81
Query: 855 SSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIP 914
S + +++D KT++A +++ AL+ + L +++ + IV +P
Sbjct: 82 KKFRSYLYGVRFTVETDAKTLVAQLQRSATDLPGALVT---RWLALLNLWDFDIV--HVP 136
Query: 915 GKCNSLADALSRQ 927
GK N +ADALSR+
Sbjct: 137 GKKNVVADALSRR 149
>gi|449687768|ref|XP_004211539.1| PREDICTED: uncharacterized protein LOC101239922 [Hydra
magnipapillata]
Length = 564
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 319 MFNLKSLNSYV--TTKKFKLINH-QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ + + LN+YV +T+ +IN + + KN + +DL +AY I + +RH +
Sbjct: 224 VLDYRELNTYVKASTRDADVINDAMREWRLMSKNSNDSVVDLRRAYLQIHVHKRHWPYQT 283
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-----AVLLRERGVRCLVYLDDFL 425
+YK Y T L FGL+ AP + + +V A+ RG Y+DD L
Sbjct: 284 VIYKNQRYALTRLGFGLSLAPVMMSSILRYVLQQDSALAETTRG-----YIDDTL 333
>gi|334393|gb|AAA91906.1| pol polyprotein [Simian immunodeficiency virus]
Length = 1047
Score = 45.4 bits (106), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 343 PLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY-------KGTVYQRTCLSFGLASA 395
P L+K + ID+ AY IP+ R++ F G YQ CL G +
Sbjct: 288 PAGLKKMKQITIIDVGDAYYSIPLDPEFRKYTAFTIPTVNNEGPGIRYQFNCLPQGWKGS 347
Query: 396 PQAFAQLSNWVAVLLRE--RGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
P F ++ + +++ + + + Y+DD + SQ+ +Q+ QTL
Sbjct: 348 PTIFQNTASKILEEIKKELKQLTIVQYMDDLWVGSQEEGPKHDQLVQTL 396
>gi|339258158|ref|XP_003369265.1| putative integrase core domain protein [Trichinella spiralis]
gi|316966526|gb|EFV51087.1| putative integrase core domain protein [Trichinella spiralis]
Length = 722
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + + T+DL+ Y + + +R F +YQ + FGL +AP F +L
Sbjct: 47 LGRAKWFTTLDLASGYWQVEVDKRDCEKTAFATPLGLYQFKVMPFGLCNAPGTFQRLMER 106
Query: 406 VAVLLRERGVRCLVYLDDFLLAS---QDSVVLKNQIFQTL 442
L G CLVYLDD ++ S ++ + ++FQ L
Sbjct: 107 TLSGL--VGKSCLVYLDDIIVFSATEEEHLTRLEEVFQRL 144
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 114/294 (38%), Gaps = 60/294 (20%)
Query: 640 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLR 699
L + + T+DL+ Y + + +R F P+ + F+ + G+C +RL
Sbjct: 47 LGRAKWFTTLDLASGYWQVEVDKRDCEKTAFATPLGLYQFK--VMPFGLCNAPGTFQRLM 104
Query: 700 ER------GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRV 753
ER G CLVYLDD ++ S ++ + Q L +G ++ +K Q++ +
Sbjct: 105 ERTLSGLVGKSCLVYLDDIIVFSATEEEHLTRLEEVFQRLKGVGLKIKPEKCQLMKKQGI 164
Query: 754 -----------------------DYLGIS-----WDTDLLQVRLPVDKIPPLRDR----- 780
+LG++ + D +V P+ ++ ++
Sbjct: 165 GADSQKTAAVRQWRTPRCVREVRQFLGLASYYRRFIKDFARVAGPLHELTRKGEKWQWGP 224
Query: 781 LQTQALIELKWFYHNLTGFTPL--HPPVPRTF-MSTDASDVGWGAMVGNVSVQG------ 831
Q A LK NL TP+ HP R F + DASD GA++ G
Sbjct: 225 RQEGAFTTLK----NLLVSTPILGHPDFSRPFVLDVDASDTAIGAVLSQTMENGNQMVIA 280
Query: 832 ----VWTQAQRSWHINLKELFTV--RAAISSNPSLVANHTVVLQSDNKTVIAYI 879
T+ ++ + + KE+ + R + ++ L ++ KT++ I
Sbjct: 281 YISRALTRPEQRYCVTRKEMIALAQRRRMKMTNGVLTREWEALGTNKKTMLPVI 334
>gi|348545597|ref|XP_003460266.1| PREDICTED: protein NLRC3-like [Oreochromis niloticus]
Length = 851
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 29/142 (20%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
++ +DL + Y +P+ R F+ Q T + FGL +AP F +L N V
Sbjct: 13 FVTKLDLLKGYWQVPLTDRPSEISAFVTPDHFLQYTVMPFGLRNAPATFQRLMNTVL--- 69
Query: 411 RERGVR-CLVYLDDFLLASQ---DSVVLKNQIFQTL-PVNLSGNCSRSGRRSHPTHSLVA 465
GVR C VYLDD + S + + ++IF L +L+ N ++
Sbjct: 70 --HGVRNCEVYLDDIVAYSSTWTEHLKTLSEIFDRLRDASLTLNLAKC------------ 115
Query: 466 NHTVVLQSDNKTVITYIRKQVG 487
K V+TY+ KQVG
Sbjct: 116 -------EFGKAVVTYLGKQVG 130
>gi|294893282|ref|XP_002774394.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239879787|gb|EER06210.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 778
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + ++LN T+ + + + L +T+DL Y IP+ + +R
Sbjct: 315 NGKVRMCIDYRNLNKACHTEAYPVPRPDDVQEHLAGARVFSTLDLRSGYWQIPVRKEDQR 374
Query: 373 FLCFLYKG--TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y+ + FGLASAP F +L + A+L VR VYLDD L+ S+
Sbjct: 375 KTAFCPGPGFPLYEWVMMPFGLASAPATFQRLMD--AILGHLPFVR--VYLDDVLIFSR 429
>gi|14010625|gb|AAK52058.1|AF364550_1 RNA-directed DNA polymerase [Drosophila melanogaster]
Length = 1065
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 314 TGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
+ I+ + ++LN K+ + +I L Y TIDL++ + I +
Sbjct: 248 SKFRIVIDYRNLNEITVDDKYPIPVMDEILDKLGNCQYFTTIDLAKGFHQIQMDENSIAK 307
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLAS 428
F K ++ T + FGL +AP F + ++N +A L+ + CLVYLDD ++ S
Sbjct: 308 TAFSTKNGHFEYTRMPFGLKNAPATFQRCMNNLLADLIYK---NCLVYLDDIIVYS 360
>gi|270001182|gb|EEZ97629.1| hypothetical protein TcasGA2_TC016077 [Tribolium castaneum]
Length = 468
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y ++DLS Y +P++ R F+ VY +SFGLA+AP F +L N V L
Sbjct: 389 YFTSVDLSMGYHQVPMSIHARGKTAFINPDGVYCFKRMSFGLANAPSQFQRLINIVVGNL 448
Query: 411 RERGVRCLVYLDD 423
R + YLDD
Sbjct: 449 RYDTA--MAYLDD 459
>gi|326674202|ref|XP_003200091.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1162
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 139/383 (36%), Gaps = 74/383 (19%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++RP + + LNS + L LQ + +DL AY + + + H
Sbjct: 391 DGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGASFFTKLDLRNAYHLVRMKQGHEW 450
Query: 667 FLCFLIP---MDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL-VYLDDFLLASQDPIVL 722
FL P + LS+ + LR+ + + VYLDD L+ S+
Sbjct: 451 KTAFLTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMIDQFIYVYLDDILIFSRSLQEH 510
Query: 723 KNQILQTLQLLTYLGWQVNLKK----SQIIP--SHRVDYLGISWDTDLLQ--VRLPVDKI 774
+ + LQ L G V +K +Q +P H V G+ D + +Q V P I
Sbjct: 511 VQHVRRVLQRLLENGLFVKAEKCVFHAQSVPFLGHIVSVEGVRMDPEKVQAVVNWP---I 567
Query: 775 PPLRDRLQ--------------------------TQALIELKWFYHNLTGFTPLH----- 803
P R LQ T A +W FT L
Sbjct: 568 PESRKALQRFLGFANFYRRFIRNFSQLAAPLTSLTSAKTPFRWSSAAQVAFTKLKSRFVS 627
Query: 804 ------PPVPRTF-MSTDASDVGWGAMVGNVSVQG-----------VWTQAQRSWHINLK 845
P R F + DAS+VG GA++ + + A+R++ I +
Sbjct: 628 APILVTPDPARQFVVEVDASEVGVGAILSQRAASDDRIHPCAFFSHRLSPAERNYDIGNR 687
Query: 846 ELFTVRAAISSNPSLVANHTV--VLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSK 903
EL V+ A+ + V ++ +D+K + YIR L S + L +
Sbjct: 688 ELLAVKLALEEWRHWLEGSGVPFIVWTDHKN-LEYIRSAKRLNSR-----QARWALFFGR 741
Query: 904 LNIHIVPYFIPGKCNSLADALSR 926
+ I + PG N DALSR
Sbjct: 742 FDFTI--SYRPGSKNIKPDALSR 762
>gi|294901157|ref|XP_002777263.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239884794|gb|EER09079.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 2220
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + ++LN T+ + + + L +T+DL Y IP+ + +R
Sbjct: 789 NGKVRMCIDYRNLNKACHTEAYPVPRPDDVQEHLAGARVFSTLDLRSGYWQIPVRKEDQR 848
Query: 373 FLCFLYKGT--VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y+ + FGLASAP F +L + A+L VR VYLDD L+ S+
Sbjct: 849 KTAFCPGPGFPLYEWVMMPFGLASAPATFQRLMD--AILGHLPFVR--VYLDDVLIFSR 903
>gi|12958098|gb|AAK07486.1| gag-pol polyprotein [Clonorchis sinensis]
Length = 1311
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 141/379 (37%), Gaps = 69/379 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G RP + +SLN+ ++ + + L + + +DL +AY HIP+A
Sbjct: 500 GDWRPCGDYRSLNNATIPDRYPIPHIHDFASTLCHTNIFSKLDLVRAYYHIPVAPDDIPK 559
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVLK 723
P D+ F + G+ + +R + +R L YLDD L+AS P
Sbjct: 560 TAITTPFDLFEF--TRMPFGLRNAAQTFQRFMDEVLRGLPFVYAYLDDVLIASTSPTEHA 617
Query: 724 NQILQTLQLLTYLGWQVNLKK------SQIIPSHRVDYLGIS-------------WDTDL 764
+ + L+ ++N+ K S H +D GIS T L
Sbjct: 618 AHLRAVFERLSTYSIRLNIDKCLFGVTSLDFLGHHIDSTGISPLPNRILALESFPIPTTL 677
Query: 765 LQVR------------LP--VDKIPPLRDRLQTQ------------ALIELKWFYHNLT- 797
Q+R +P D + PL D L + A K + T
Sbjct: 678 TQLRRFIGIINYYRRFIPHCADILQPLTDLLGCKEKSVTLPSVAIAAFERAKQAIAHATK 737
Query: 798 -GFTPLHPPVPRTFMSTDASDVGWGA----MVGNVSVQ-GVWTQ----AQRSWHINLKEL 847
F H + ++TDAS+ GA +V N S ++Q AQ + +EL
Sbjct: 738 LSFLDTHEST-KLILTTDASNAAVGAVLHQVVNNASQPLAFFSQKMQAAQTRYSTFGREL 796
Query: 848 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 907
+ AI L+ + +Q+D+K + + S + L +S+
Sbjct: 797 LAIYLAIRHFRHLLEGRSFTIQTDHKPLTYAFNAKPDRYS----PREIRHLDYISQFTTD 852
Query: 908 IVPYFIPGKCNSLADALSR 926
I + PG N +ADALSR
Sbjct: 853 I--RYTPGSDNVVADALSR 869
>gi|391331501|ref|XP_003740183.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 1388
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 147/382 (38%), Gaps = 72/382 (18%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
DG+ R + + +N ++ + F L Q++ + L Y + +D A+ H+ + +
Sbjct: 502 SDGSFRICLDPRYINPHIKRRTFPLPIAQELLMQLAGAQYYSVVDGDAAFWHLKLDQESS 561
Query: 666 RFLCFLIPMDMSSFRPSLSSP-GVCPTIKLGRRLRE---------RGVRCLVYLDDFLLA 715
F P F+ P G+ + R E +GV V DDF +
Sbjct: 562 DLCTFATPWGNYQFK---RLPFGI---VDASERFSEVIHALFADLKGVANCV--DDFPIH 613
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQ------------------IIPSHRVD-YL 756
+ + L +G ++N KK Q IP R+D L
Sbjct: 614 GRTREEHDKNLEAFLSRCREVGLKLNEKKFQYCQPSVKFLGHVVGKDGIAIPDSRIDAIL 673
Query: 757 GISWDTDLLQVRLPVDKIPPLRDRLQTQALIE--LKWFYHNLTGFT-------------- 800
+S D +VR + I + + A I L+ N T FT
Sbjct: 674 KMSPPKDQKEVRQFLGMINYVAKFIPNAANITAPLRQLTRNDTDFTWNPGAEDAFSRLKH 733
Query: 801 -----PL---HPPVPRTFMSTDASDVGWGA-MVGN---VSVQGV-WTQAQRSWHINLKEL 847
P+ P T +S DAS G GA ++ N V+ T+ Q + KEL
Sbjct: 734 ALTKAPVLAHFDPTCETTLSVDASSYGIGAVLIQNQRPVAFSSTSLTETQSRYAQIEKEL 793
Query: 848 FTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIH 907
+ A + V +++D+ +IA ++K+ L S L +K++L + + +
Sbjct: 794 LAIVYACEHFKFFIQGQQVTIETDHHPLIAIVKKELALLSPRL----QKMMLRLLRFDFK 849
Query: 908 IVPYFIPGKCNSLADALSRQAL 929
+ +IPGK +ADALSR+ L
Sbjct: 850 L--QYIPGKYMFIADALSRKPL 869
Score = 43.5 bits (101), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 59 PVPRTFMSTDASDVGWGA-MVGN---VSVQGV-WTQAQRSWHINLKELFTVRAAISSNPS 113
P T +S DAS G GA ++ N V+ T+ Q + KEL + A
Sbjct: 746 PTCETTLSVDASSYGIGAVLIQNQRPVAFSSTSLTETQSRYAQIEKELLAIVYACEHFKF 805
Query: 114 LVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNS 173
+ V +++D+ +IA ++K+ L S L +K++L + + + + +IPGK
Sbjct: 806 FIQGQQVTIETDHHPLIAIVKKELALLSPRL----QKMMLRLLRFDFKL--QYIPGKYMF 859
Query: 174 LADALSRQAL 183
+ADALSR+ L
Sbjct: 860 IADALSRKPL 869
>gi|198424591|ref|XP_002120847.1| PREDICTED: similar to gag-pol polyprotein [Ciona intestinalis]
Length = 1302
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 146/390 (37%), Gaps = 85/390 (21%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
D + R V + + LN + + L + L + +DL +AY IP+ +
Sbjct: 460 SDNSYRCVGDYRRLNQMTVSDSYPLPFLRDFANILHGRTIFSKLDLERAYHQIPMDKSSV 519
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR-----CLVYLDDFLLASQDPI 720
P +++ S G+C + R + VR C ++DD L+AS P
Sbjct: 520 AKTTITTPFGAFAYK--RMSFGLCNAAQTFSRFISQVVRGLEEFCFAFVDDLLVASYSPE 577
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTD--------LLQVR-LPV 771
+ + Q L+ G +N KKS I+ + + +LG D ++ +R P+
Sbjct: 578 EHEKHLKLVFQRLSEYGLLINTKKS-ILGASELQFLGHHITKDGMTAIADRVVAIRAFPL 636
Query: 772 DK------------------IPPLRDRLQTQALIELK---------WFYHNLTGFTPL-- 802
K IP D L+ + K W +++ F +
Sbjct: 637 PKTVSELRRFLGMVNFYRRFIPHAADTLRHLNSMLCKNPSNRRPLVWSTESMSAFQKIKT 696
Query: 803 ---------HPPVPRTF-MSTDASDVGWGAMVGNVSVQGVW----------TQAQRSWHI 842
+P + F + TD S GA++ + V+G W +Q+ + +
Sbjct: 697 MLSEETLLCYPKLNGRFSLVTDCSRTAMGAVLNQL-VEGEWKPLAFFSRALKPSQKKYSV 755
Query: 843 NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVI-AYIRKQGGL-----RSHALLAETKK 896
+EL + A+ L+ + +D+K ++ A+ K+ R +L+AE K
Sbjct: 756 FDQELLAIYDAVRHFKYLLEGRKFNIVTDHKPIVRAFHSKRDRFSPRQTRQFSLIAEYTK 815
Query: 897 LLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ +I G NS+AD LSR
Sbjct: 816 SI------------EYISGFQNSVADCLSR 833
>gi|115676939|ref|XP_001186509.1| PREDICTED: uncharacterized protein LOC754648 [Strongylocentrotus
purpuratus]
Length = 1464
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN T + + + I L + Y IDL++ Y +P+ + F+
Sbjct: 1098 DYRKLNQVTVTDAEPIPDQEGIFAKLSRAKYFTKIDLTKGYWQVPLTEEAKELTAFVTPD 1157
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
+YQ + FGL +AP +F+++ A+L GV ++DD L+
Sbjct: 1158 GLYQFRSMPFGLVNAPASFSRIMR--ALLRGLHGVDN--FIDDILI 1199
>gi|7682782|gb|AAF67363.1| Hypothetical protein T32B20.f [Arabidopsis thaliana]
Length = 1504
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + LN K+ L ++ L+ + IDL+ Y IPIA R
Sbjct: 665 DGSFRLCIDYRELNRVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEADVR 724
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ + FGL +AP AF +L N V + V ++++DD L+ S+
Sbjct: 725 KTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFV--IIFIDDILVYSK 779
>gi|189239734|ref|XP_001808421.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1002
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y ++DL Y I ++ ++ F+ + Y+ + FGL +AP F ++ N VL
Sbjct: 346 YFTSLDLIAGYYQIQMSPESIQYTSFITQDGQYEFLRMPFGLCNAPAVFQRVIN--TVLG 403
Query: 411 RERGVRCLVYLDDFLLAS---QDSVVLKNQIFQTLPVN 445
+ R + LVYLDD L+ + ++S + ++F L N
Sbjct: 404 QLRFTKVLVYLDDILIPAKSVEESFCVLKEVFNLLKHN 441
>gi|341895838|gb|EGT51773.1| hypothetical protein CAEBREN_12621 [Caenorhabditis brenneri]
Length = 1272
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + + L I + Y IDL++AY I ++ + + LC +YQ
Sbjct: 539 LNDSIEQHRHPLPTADDIFTIINGGKYFTQIDLAEAYLQIELSDQAKDLLCINTHKGIYQ 598
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFLL 426
L FG+ SAP F Q+ + + G+ YLDD ++
Sbjct: 599 FQLLPFGVKSAPGIFQQVMDQLI-----NGIEGAAAYLDDIII 636
>gi|241956792|ref|XP_002421116.1| retrotransposon reverse transcriptase, pseudogene, putative
[Candida dubliniensis CD36]
gi|223644459|emb|CAX41275.1| retrotransposon reverse transcriptase, pseudogene, putative
[Candida dubliniensis CD36]
Length = 230
Score = 45.1 bits (105), Expect = 0.20, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
AN + + + + LN F L N +++ + ++ + Y ++IDL Q Y + I +
Sbjct: 73 ANGEVRLCNDFRGLNKLTIADHFHLPNMEELLMEVKNSTYYSSIDLCQGYHQVLINEADK 132
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFLLASQD 430
F + + FGL +AP +F ++ V RE L+YLDD ++ S++
Sbjct: 133 EKTAFHTPFGSFHWVVMPFGLINAPASFQRMMEQV---FREYNHDFMLIYLDDLIIYSKN 189
>gi|54291803|gb|AAV32172.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I R F +
Sbjct: 938 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIRKTAFTTRY 997
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 998 GLYKFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1044
>gi|308447755|ref|XP_003087511.1| hypothetical protein CRE_10791 [Caenorhabditis remanei]
gi|308255031|gb|EFO98983.1| hypothetical protein CRE_10791 [Caenorhabditis remanei]
Length = 630
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ +L N ++ KF L + L + + AT D Y H+ I L F
Sbjct: 249 LILDLSEFNKNLSPPKFTLETWKHARPELVRMRFAATFDFKSGYHHVKIEENSSELLAFS 308
Query: 378 YK----GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
++ L FGL++AP F ++ + R G++ +Y+DD L+ ++
Sbjct: 309 LTDPPTAPYFKFRALPFGLSTAPWLFTKIFRPIVGKWRRNGIKIWLYIDDGLIVAE 364
>gi|350646758|emb|CCD58479.1| KRAB-A domain-containing protein [Schistosoma mansoni]
Length = 1239
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L I L + + +DL+ Y + + + R+
Sbjct: 524 DSSLRLCIDYRRLNAITKRDSFPLPRIDAILDALSGACWFSMLDLASGYWQVEVRPQDRK 583
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L VL +CL+YLDD ++
Sbjct: 584 KTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQ--TVLQDIVPHKCLIYLDDIIV 635
>gi|341885187|gb|EGT41122.1| hypothetical protein CAEBREN_31824 [Caenorhabditis brenneri]
Length = 1208
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 150/394 (38%), Gaps = 85/394 (21%)
Query: 607 DGTMRPVFNLKS-LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAY--CHIP---- 659
+G++R + + LN + T L +I L Y + IDL+ AY C +
Sbjct: 367 NGSIRLCADFSTGLNDAIETNNHPLPTADEIFSKLNGGLYFSQIDLADAYLQCEVDEQAK 426
Query: 660 ---IARRHRRFLCF-LIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLA 715
+ HR C+ +P + S+PG+ + RL YLDD ++
Sbjct: 427 QLLVINTHRGLFCYNRLPFGIK------SAPGIFQSFM--DRLINGLDGTSAYLDDLIVT 478
Query: 716 SQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP----- 770
++ +Q L G+++ ++K + H + YLG + D R P
Sbjct: 479 GSSIEEHNRRVHAVMQKLQEFGFRIRMEKCSFL-QHEIKYLGFIINKD---GRKPDPEKI 534
Query: 771 --VDKIPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVP----------------RTF- 810
+ +PP ++ Q ++ + L FY +T F L PP+ ++F
Sbjct: 535 QHIKNMPPPQNVSQLRSFLGLVQFYGTFITDFFHLRPPLDALAKKDAEYTWTPECQKSFD 594
Query: 811 ----------------------MSTDASDVGWGAMVGN----------VSVQGVWTQAQR 838
++ DAS G GA++ + + + Q+
Sbjct: 595 RIKEILQSDLLLTHFDPNLPIIVAADASQYGIGAVISHRFPDGSEKAIYHISKALSTTQQ 654
Query: 839 SWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLL 898
++ KE F + A++ + L++D+K ++A + G+ H+ ++
Sbjct: 655 NYSQIEKEAFGLITAVTKFHRFIHGRHFTLRTDHKPLLAIFGGKKGVPVHS-ANRLQRWA 713
Query: 899 LIMSKLNIHIVPYFIPGKCNSLADALSRQALIPD 932
+IM LN +I K ADALSR LI D
Sbjct: 714 IIM--LNYSFDIEYINTKDFGQADALSR--LISD 743
>gi|291235377|ref|XP_002737621.1| PREDICTED: polyprotein-like, partial [Saccoglossus kowalevskii]
Length = 306
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 702 GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTY-LGWQVNLKKSQII-PSHRVDYLGIS 759
GV+ + +L D L P + + L LL + LG + L K + + P +++YLGI
Sbjct: 80 GVQTIFHLLDDFLTVNSPSYDAERTMAILTLLFHRLG--IPLAKQKTVGPCCKLEYLGIE 137
Query: 760 WDTDLLQVRLPVDKIPPLRDRLQT 783
DT+ +Q RLP DK+ +R+ LQT
Sbjct: 138 LDTNHMQARLPEDKLARIRELLQT 161
>gi|317141088|ref|XP_003189333.1| hypothetical protein AOR_1_2970174 [Aspergillus oryzae RIB40]
Length = 1178
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ ++ L ++ L Y +DL AY I I +
Sbjct: 639 DGSLRLCVDYRGLNAVTVKNRYPLPRIDELMDRLVGAKYFTKLDLRDAYHRIRIQKGDEW 698
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ T + FGL +AP F A ++ + +L + C+VYLDD L+ SQ
Sbjct: 699 KTAFRTRYGHFEYTVMPFGLCNAPATFQAYINEAMKGILDD---YCVVYLDDILIYSQ 753
>gi|301610638|ref|XP_002934857.1| PREDICTED: hypothetical protein LOC100497321 [Xenopus (Silurana)
tropicalis]
Length = 1175
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+A D+ A+ +P+ + + L +KG+ Y CL G + + F S ++ ++R
Sbjct: 795 MAKADIESAFRLLPVHKESQHLLGCFFKGSYYVDRCLPMGCSISCAYFEAFSTFLEWVVR 854
Query: 412 ER-GVRCLV-YLDDFLLASQDSVVLKNQIFQTL 442
+R GV L+ YLDDFL L + QTL
Sbjct: 855 KRAGVNTLIHYLDDFLCVGPGDSGLCAVLLQTL 887
>gi|345497458|ref|XP_003427997.1| PREDICTED: hypothetical protein LOC100679176 [Nasonia vitripennis]
Length = 340
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
++SY+ KL N + L + +++ +DL + +PI + R+ L F+Y +YQ
Sbjct: 274 ISSYLLADYLKLENIKLAAELLHQFNFMCKLDLKDVFFLVPICDKDRKCLRFIYNDKLYQ 333
Query: 385 RTCLSFG 391
TCL FG
Sbjct: 334 FTCLPFG 340
>gi|154277048|ref|XP_001539369.1| hypothetical protein HCAG_06974 [Ajellomyces capsulatus NAm1]
gi|150414442|gb|EDN09807.1| hypothetical protein HCAG_06974 [Ajellomyces capsulatus NAm1]
Length = 1201
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN ++ + +++ LQ + IDL AY I IA
Sbjct: 398 LRLCVDYRGLNKITIKDRYPIPRIEEMLDRLQNAIIFSKIDLRDAYYRIRIAEGDEWKTA 457
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + Y+ + GL +AP F N V L + + C+VYLDD L+ SQ++
Sbjct: 458 FRTRYGSYEFRVMPMGLCNAPATFQSYINEVLKGLVD--ICCIVYLDDILIYSQNT 511
>gi|14132805|emb|CAC28509.2| reverse transcriptase/integrase [Avian endogenous retrovirus
EAV-HP]
Length = 858
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLAT-IDLSQAYCHIPIARRHRR 666
G R + +L+++NS + F ++ L ++ T IDL + IP+A + R
Sbjct: 72 GAFRLLHDLRAVNSQLI--PFGVVQQGAPVLSAVPEEWEVTAIDLKDCFFSIPLAEQDRE 129
Query: 667 FLCFLIPMDMSSFRPS------------LSSPGVCPTIKLGRRL-----RERGVRCLV-- 707
F +P+ + RP+ SP +C + +G+ L C++
Sbjct: 130 AFAFTVPVSNNQ-RPTQRYQWRVLPQGMACSPTICQMV-VGKILGPLHHTSEASECIILH 187
Query: 708 YLDDFLLASQDPIVLKNQILQT--LQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLL 765
Y+DD LLA+ P + + Q L+T + LLT G+ V+ +K Q V +LG ++ +
Sbjct: 188 YMDDLLLAA--PTLARLQDLETCVISLLTKAGFTVSSEKIQR--GSGVQFLGYKFEEGTV 243
Query: 766 QVRLPVDKIPPLRDRLQTQALI-ELKW--------------FYHNLTGFTPLHP 804
+ V+ P +R Q L+ L+W FY L G P P
Sbjct: 244 R-PTGVNITPRIRTLWDVQKLVGALQWIRGALGIPPRLMQPFYDQLKGSDPREP 296
>gi|388856373|emb|CCF49922.1| uncharacterized protein [Ustilago hordei]
Length = 1214
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN + L ++ L+K +DL AY I IA+
Sbjct: 430 DGGLRLCVDYRGLNEITVKNRAPLPLIEEQLFLLRKARIYTKLDLRAAYNLIWIAKGDEW 489
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE-RGVRCLVYLDDFLLAS 428
F + +Y+ + FGLA+AP A +++ + R+ G+ +VYLDDFL+ S
Sbjct: 490 KTAFGTQLGLYEYLVMPFGLANAP---AHFQSFINDIFRDIIGIYVVVYLDDFLIFS 543
>gi|382948098|gb|AFG33164.1| DNA polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 271
Query: 761 DTDLLQV 767
D + +++
Sbjct: 272 DENFMKI 278
>gi|340382146|ref|XP_003389582.1| PREDICTED: uncharacterized protein K02A2.6-like [Amphimedon
queenslandica]
Length = 982
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 147/395 (37%), Gaps = 91/395 (23%)
Query: 607 DGTMRPVFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
DG++R + K ++N + T + L + + L + +DL AY IP+ +
Sbjct: 171 DGSIRLCGDYKVTVNPVLLTDTYPLPRSEDLFAALAGGKIFSKLDLKHAYLQIPLDEASK 230
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIV 721
+F P + F+ GV L +R E + L VY+DD L+ D
Sbjct: 231 KFTTINTPKGL--FQYERLPFGVSSAPSLFQRTIENLLSHLQHVCVYIDDILVTGTDDAD 288
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQVRLPVD-KIPPLRD 779
N + LQ L G + K + +PS V+YLG D+D L P + K+ +R+
Sbjct: 289 HLNNLHAVLQTLEEAGLTLKQSKCKFGVPS--VEYLGHIIDSDGLH---PSEAKVKAIRE 343
Query: 780 RLQTQALIELKWF------YHNL-----TGFTPLH----PPVP--------RTFMST--- 813
+ ELK F YH T +PLH P + F
Sbjct: 344 APTPTNVTELKSFLGLLNYYHKFLPDVATVLSPLHLLLRKDTPWKWSQDQEKAFQKAKAM 403
Query: 814 --------------------DASDVGWGAMVGNVSVQG----------VWTQAQRSWHIN 843
DAS G GA++ + G + A++++
Sbjct: 404 LHSSSVLTHYDEKKPLVVVCDASPYGLGAVLSHRMSDGTDLPVAYASRTLSAAEKNYSQL 463
Query: 844 LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMS- 902
KE + A+ + VL SD+K + LL+E+K++ L+ S
Sbjct: 464 EKEALAIIFAVRKFHDYIYGRKFVLHSDHKPL------------QFLLSESKQIPLLASS 511
Query: 903 ---KLNIHIVPY-----FIPGKCNSLADALSRQAL 929
+ I + Y + PGK ADALSR L
Sbjct: 512 RIQRWAIALSAYNYVIQYKPGKLIPHADALSRLPL 546
>gi|317158449|ref|XP_003190969.1| hypothetical protein AOR_1_910034 [Aspergillus oryzae RIB40]
Length = 1605
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ ++ L ++ L Y +DL AY I I +
Sbjct: 639 DGSLRLCVDYRGLNAVTVKNRYPLPRIDELMDRLVGAKYFTKLDLRDAYHRIRIQKGDEW 698
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ T + FGL +AP F A ++ + +L + C+VYLDD L+ SQ
Sbjct: 699 KTAFRTRYGHFEYTVMPFGLCNAPATFQAYINEAMKGILDD---YCVVYLDDILIYSQ 753
>gi|158931142|sp|P27973.2|POL_SIVV1 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1470
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 343 PLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY-------KGTVYQRTCLSFGLASA 395
P L+K + ID+ AY IP+ R++ F G YQ CL G +
Sbjct: 711 PAGLKKMKQITIIDVGDAYYSIPLDPEFRKYTAFTIPTVNNEGPGIRYQFNCLPQGWKGS 770
Query: 396 PQAFAQLSNWVAVLLRE--RGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
P F ++ + +++ + + + Y+DD + SQ+ +Q+ QTL
Sbjct: 771 PTIFQNTASKILEEIKKELKQLTIVQYMDDLWVGSQEEGPKHDQLVQTL 819
>gi|317158528|ref|XP_003190983.1| hypothetical protein AOR_1_1018034 [Aspergillus oryzae RIB40]
Length = 1585
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ ++ L ++ L Y +DL AY I I +
Sbjct: 639 DGSLRLCVDYRGLNAVTVKNRYPLPRIDELMDRLVGAKYFTKLDLRDAYHRIRIQKGDEW 698
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ T + FGL +AP F A ++ + +L + C+VYLDD L+ SQ
Sbjct: 699 KTAFRTRYGHFEYTVMPFGLCNAPATFQAYINEAMKGILDD---YCVVYLDDILIYSQ 753
>gi|317159454|ref|XP_003191074.1| hypothetical protein AOR_1_1498024 [Aspergillus oryzae RIB40]
Length = 1605
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ ++ L ++ L Y +DL AY I I +
Sbjct: 639 DGSLRLCVDYRGLNAVTVKNRYPLPRIDELMDRLVGAKYFTKLDLRDAYHRIRIQKGDEW 698
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ T + FGL +AP F A ++ + +L + C+VYLDD L+ SQ
Sbjct: 699 KTAFRTRYGHFEYTVMPFGLCNAPATFQAYINEAMKGILDD---YCVVYLDDILIYSQ 753
>gi|157366227|gb|ABV45229.1| unknown [Ascogregarina taiwanensis]
Length = 728
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLA------TIDLSQAYCHIPI 366
+ G + + + LN+ + + ++ IPLF Q+ A +D++ + ++P+
Sbjct: 426 DGGWRLCLDYRRLNAQMESDRYP------IPLFWQQIQEAAHHRWYICLDINWGFWNLPL 479
Query: 367 ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
R F FL ++ L FG+ ++P F ++ + V +GV C Y+DD ++
Sbjct: 480 KEDSREFTAFLTHRGAFEFRVLLFGVKNSPSEFQRMMDGVLSEFYNKGVLC--YIDDIII 537
Query: 427 ASQD 430
+ D
Sbjct: 538 FAND 541
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLA------TIDLSQAYCHIPI 660
DG R + + LN+ + + ++ IPLF Q+ A +D++ + ++P+
Sbjct: 426 DGGWRLCLDYRRLNAQMESDRYP------IPLFWQQIQEAAHHRWYICLDINWGFWNLPL 479
Query: 661 ARRHRRFLCFLIPMDMSSFRPSL----SSPGVCPTIKLG--RRLRERGVRCLVYLDDFLL 714
R F FL FR L +SP + G +GV C Y+DD ++
Sbjct: 480 KEDSREFTAFLTHRGAFEFRVLLFGVKNSPSEFQRMMDGVLSEFYNKGVLC--YIDDIII 537
Query: 715 ASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPV-DK 773
+ DP ++ + LQ L G + L K+ +I RV LG D + P DK
Sbjct: 538 FANDPSQCLGRLEEILQKLKDNGLYIKLAKT-VILHDRVKLLGHYVGLDGI---FPDPDK 593
Query: 774 IPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPR 808
+ +R+ L ++ +L+ F +++ P R
Sbjct: 594 VKAVREALPPRSKKDLRSFLGSISYLRRFMPQFSR 628
>gi|301621282|ref|XP_002939985.1| PREDICTED: hypothetical protein LOC100487960 [Xenopus (Silurana)
tropicalis]
Length = 911
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 64 FMSTDASDVGWGAMVGNVSVQG----VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 119
F + A G+GA G W + + + ++ L ELF + A+ + +AN
Sbjct: 764 FFTDAAGSGGFGAYFQGKWCSGPWPSEWIEDKLTSNLTLLELFPIIVAMELWGTQLANRA 823
Query: 120 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 179
VV +DN +V+ I S +L K L+L +LN+ +PG N +AD+LS
Sbjct: 824 VVFYTDNMSVVMAINNLTS-GSRPVLCLLKHLVLRCLQLNVRFGAKHVPGYTNEIADSLS 882
Query: 180 R 180
R
Sbjct: 883 R 883
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 810 FMSTDASDVGWGAMVGNVSVQG----VWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 865
F + A G+GA G W + + + ++ L ELF + A+ + +AN
Sbjct: 764 FFTDAAGSGGFGAYFQGKWCSGPWPSEWIEDKLTSNLTLLELFPIIVAMELWGTQLANRA 823
Query: 866 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 925
VV +DN +V+ I S +L K L+L +LN+ +PG N +AD+LS
Sbjct: 824 VVFYTDNMSVVMAINNLTS-GSRPVLCLLKHLVLRCLQLNVRFGAKHVPGYTNEIADSLS 882
Query: 926 R 926
R
Sbjct: 883 R 883
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 11/173 (6%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+A +D+ A+ +P+ L YKG Y CL G + + F S ++ ++R
Sbjct: 531 MAKVDVESAFRLLPVHPESLHLLGCHYKGGYYVDRCLPMGCSISCAYFEAFSTFIEWVVR 590
Query: 412 ER-GVRCLV-YLDDFLLASQDSVVLKNQIFQTLP--VNLSGNCSRSGRRSHPTHSL--VA 465
+R GV ++ YLDDFL +L + QT+ +L G + P+ L +
Sbjct: 591 KRAGVSAVIHYLDDFLCVGPGHTMLCAVLLQTVQAVADLFGVPLAPDKTEGPSTCLRFLG 650
Query: 466 NHTVVLQSDNK---TVITYIRKQVGLRSNALLAETKKLLLIMSKLNI--HIVP 513
++ + + I +R++VG A ++L ++ KLN I+P
Sbjct: 651 IEIDTIKQECRLPLDKIQQLREEVGYAQTAKKVTLRQLQSLLGKLNFACRIIP 703
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 698 LRER-GVRCLV-YLDDFLLASQDPIVLKNQILQTLQLLTYL-GWQVNLKKSQIIPSHRVD 754
+R+R GV ++ YLDDFL +L +LQT+Q + L G + K++ PS +
Sbjct: 589 VRKRAGVSAVIHYLDDFLCVGPGHTMLCAVLLQTVQAVADLFGVPLAPDKTEG-PSTCLR 647
Query: 755 YLGISWDTDLLQVRLPVDKIPPLRDRL 781
+LGI DT + RLP+DKI LR+ +
Sbjct: 648 FLGIEIDTIKQECRLPLDKIQQLREEV 674
>gi|388856364|emb|CCF49913.1| uncharacterized protein [Ustilago hordei]
Length = 999
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + + LN + L ++ L+K +DL AY I IA+
Sbjct: 222 DGGLRLCVDYRGLNEITVKNRAPLPLIEEQLFLLRKARIYTKLDLRAAYNLIWIAKGDEW 281
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE-RGVRCLVYLDDFLLAS 428
F + +Y+ + FGLA+AP A +++ + R+ G+ +VYLDDFL+ S
Sbjct: 282 KTAFGTQLGLYEYLVMPFGLANAP---AHFQSFINDIFRDIIGIYVVVYLDDFLIFS 335
>gi|382948100|gb|AFG33165.1| DNA polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 271
Query: 761 DTDLLQV 767
D + +++
Sbjct: 272 DENFMKI 278
>gi|308490919|ref|XP_003107651.1| hypothetical protein CRE_13303 [Caenorhabditis remanei]
gi|308250520|gb|EFO94472.1| hypothetical protein CRE_13303 [Caenorhabditis remanei]
Length = 738
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 61 PRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ------RSWHINLKELFTVRAAISSNPSL 114
P+ F+ TDAS G GA++ N S Q V ++ ++ L+EL V+ A+ S
Sbjct: 241 PQCFLFTDASAEGLGAVLKNGSGQTVMRMSELGGTGFQNESSALRELRAVQMAVERMASW 300
Query: 115 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPY-FIPGKCNS 173
V++ +D++ + +RK R+ ++AE + S +I + +IP + N
Sbjct: 301 -KRGAVLIHTDSQAAVIILRKGSMRRTLQIVAER----VWESLRSIGQAKFIWIPREQNK 355
Query: 174 LADALSRQALIPDWHLLPSLTESVFQRWGIESCAALCDPES 214
AD SR DW + E +RWG C D ++
Sbjct: 356 EADEASRDFDYDDWAVQNWAFEWAQKRWGEVKCDWFADEQN 396
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 807 PRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ------RSWHINLKELFTVRAAISSNPSL 860
P+ F+ TDAS G GA++ N S Q V ++ ++ L+EL V+ A+ S
Sbjct: 241 PQCFLFTDASAEGLGAVLKNGSGQTVMRMSELGGTGFQNESSALRELRAVQMAVERMASW 300
Query: 861 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPY-FIPGKCNS 919
V++ +D++ + +RK R+ ++AE + S +I + +IP + N
Sbjct: 301 -KRGAVLIHTDSQAAVIILRKGSMRRTLQIVAER----VWESLRSIGQAKFIWIPREQNK 355
Query: 920 LADALSRQALIPDWHLLPSLTESVFQRWGTI 950
AD SR DW + E +RWG +
Sbjct: 356 EADEASRDFDYDDWAVQNWAFEWAQKRWGEV 386
>gi|382948092|gb|AFG33161.1| DNA polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 271
Query: 761 DTDLLQV 767
D + +++
Sbjct: 272 DENFMKI 278
>gi|154280837|ref|XP_001541231.1| hypothetical protein HCAG_03328 [Ajellomyces capsulatus NAm1]
gi|150411410|gb|EDN06798.1| hypothetical protein HCAG_03328 [Ajellomyces capsulatus NAm1]
Length = 1201
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN ++ + +++ LQ + IDL AY I IA
Sbjct: 398 LRLCVDYRGLNKITIKDRYPIPRIEEMLDRLQNAIIFSKIDLRDAYYRIRIAEGDEWKTA 457
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + Y+ + GL +AP F N V L + + C+VYLDD L+ SQ++
Sbjct: 458 FRTRYGSYEFRVMPMGLCNAPATFQSYINEVLKGLVD--ICCIVYLDDILIYSQNT 511
>gi|382948094|gb|AFG33162.1| DNA polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 271
Query: 761 DTDLLQV 767
D + +++
Sbjct: 272 DENFMKI 278
>gi|301620660|ref|XP_002939688.1| PREDICTED: uncharacterized protein K02A2.6-like [Xenopus (Silurana)
tropicalis]
Length = 1219
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G+ + +L+ N + L + ++I L+ + +T+DL AY + + R
Sbjct: 467 GIRLCVDLREPNKAIVIDNHPLPHIEEIFSELRGAKFFSTLDLQSAYHQVLLHEESRDLT 526
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +++ + +GLASAP F +L + ++L GV+C YLDD ++
Sbjct: 527 AFITHDGLFRFKRVPYGLASAPSCFQRLMS--SILHDIPGVQC--YLDDIIV 574
>gi|382948096|gb|AFG33163.1| DNA polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 271
Query: 761 DTDLLQV 767
D + +++
Sbjct: 272 DENFMKI 278
>gi|154275976|ref|XP_001538833.1| hypothetical protein HCAG_06438 [Ajellomyces capsulatus NAm1]
gi|150413906|gb|EDN09271.1| hypothetical protein HCAG_06438 [Ajellomyces capsulatus NAm1]
Length = 1242
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN ++ + +++ LQ + IDL AY I IA
Sbjct: 398 LRLCVDYRGLNKITIKDRYPIPRIEEMLDRLQNAVIFSKIDLRDAYYRIRIAEGDEWKTA 457
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + Y+ + GL +AP F N V L + + C+VYLDD L+ SQ++
Sbjct: 458 FRTRYGSYEFRVMPMGLCNAPATFQSYINEVLKGLVD--ICCIVYLDDILIYSQNT 511
>gi|348537238|ref|XP_003456102.1| PREDICTED: hypothetical protein LOC100701410 [Oreochromis
niloticus]
Length = 1090
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ + IDL+QAY + + R+FL ++YQ L FG+ASAP + + + VL
Sbjct: 380 HFSKIDLAQAYLQMEVEETSRKFLVINTHKSLYQYNRLVFGIASAPAVWQRAMD--QVLQ 437
Query: 411 RERGVRCLVYLDDFLLASQDS 431
G +C +LDD ++ D
Sbjct: 438 GIPGTQC--FLDDIIVTGVDE 456
>gi|301612028|ref|XP_002935526.1| PREDICTED: hypothetical protein LOC100494384 [Xenopus (Silurana)
tropicalis]
Length = 787
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 61 PRTFMSTDASDV-GWGA-MVGNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLV 115
P + TDA+ G+GA G G W + + ++ ELF + A+ +
Sbjct: 633 PEISLFTDAAGATGFGAYFAGKWCAAGWPQEWAACKLTSNLTFLELFPIIVAVELWGRDL 692
Query: 116 ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLA 175
+N +V+ +SDN + + S +LA + L+L +LNI IPG+ N +A
Sbjct: 693 SNKSVLFRSDNMATVLAVNNLTS-SSRPVLALLRHLVLRCLQLNIDFRAKHIPGETNEIA 751
Query: 176 DALSR 180
DALSR
Sbjct: 752 DALSR 756
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 807 PRTFMSTDASDV-GWGA-MVGNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLV 861
P + TDA+ G+GA G G W + + ++ ELF + A+ +
Sbjct: 633 PEISLFTDAAGATGFGAYFAGKWCAAGWPQEWAACKLTSNLTFLELFPIIVAVELWGRDL 692
Query: 862 ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLA 921
+N +V+ +SDN + + S +LA + L+L +LNI IPG+ N +A
Sbjct: 693 SNKSVLFRSDNMATVLAVNNLTS-SSRPVLALLRHLVLRCLQLNIDFRAKHIPGETNEIA 751
Query: 922 DALSR 926
DALSR
Sbjct: 752 DALSR 756
>gi|82592700|gb|ABB84517.1| polyprotein [Duck hepatitis B virus]
Length = 787
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D + +++
Sbjct: 565 DDNFMKI 571
>gi|254587279|emb|CAX83696.1| Gap-Pol polyprotein [Schistosoma japonicum]
Length = 1365
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y A +DLS AY IP+A +++L +++ L FG+ +AP F Q+ + +L
Sbjct: 576 YFAKLDLSDAYLQIPVAEECKQYLTINTHKGLFRYNRLPFGVKTAPSIFQQIMD--TMLQ 633
Query: 411 RERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
G YLDD L+ D L+ ++ L
Sbjct: 634 DIPGT--AAYLDDILIMGVDQADLEKKLDSVL 663
>gi|1542877|emb|CAA65152.1| orf [Drosophila melanogaster]
Length = 1494
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-AVLL 410
+DL + H+ + + ++ F+ Y+ + FGL +AP F + N + A ++
Sbjct: 802 FTKLDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNKIFADMI 861
Query: 411 RERGVRCLVYLDDFLLASQD 430
RE V +VY+DD LLA+++
Sbjct: 862 RENKV--VVYMDDILLATEN 879
>gi|340380841|ref|XP_003388930.1| PREDICTED: uncharacterized protein K02A2.6-like [Amphimedon
queenslandica]
Length = 1148
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 607 DGTMRPVFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
DG++R + K ++N + T + L + + L + +DL AY IP+ +
Sbjct: 348 DGSIRLCGDYKVTVNPVLLTDTYPLPRSEDLFAALAGGKIFSKLDLKHAYLQIPLDEASK 407
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIV 721
+F P + F+ GV L +R E + L VY+DD L+ D
Sbjct: 408 KFTTINTPKGL--FQYERLPFGVSSAPSLFQRTIENLLSHLQHVCVYIDDILVTGTDDAD 465
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQVRLPVD-KIPPLRD 779
N + LQ L G + K + +PS V+YLG D+D L P + K+ +R+
Sbjct: 466 HLNNLHAVLQTLEEAGLTLKQSKCKFGVPS--VEYLGHIIDSDGLH---PSEAKVKAIRE 520
Query: 780 RLQTQALIELKWF------YHNL-----TGFTPLH 803
+ ELK F YH T +PLH
Sbjct: 521 APTPTNVTELKSFLGLLNYYHKFLPDVATVLSPLH 555
>gi|317146488|ref|XP_003189815.1| hypothetical protein AOR_1_1900144 [Aspergillus oryzae RIB40]
Length = 1605
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ ++ L ++ L Y +DL AY I I +
Sbjct: 639 DGSLRLCVDYRGLNAVTVKNRYPLPRIDELMDRLVGAKYFTKLDLRDAYHRIRIQKGDEW 698
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ T + FGL +AP F A ++ + +L + C+VYLDD L+ SQ
Sbjct: 699 KTAFRTRYGHFEYTMMPFGLCNAPATFQAYINEAMKGILDD---YCVVYLDDILIYSQ 753
>gi|259486418|tpe|CBF84238.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 1530
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 582 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 640
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 641 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 690
Query: 434 L 434
+
Sbjct: 691 V 691
>gi|124359710|gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 44.7 bits (104), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 15/149 (10%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + ++LN KF + +++ L + + +DL Y + + F
Sbjct: 434 MCIDYRALNKATVPDKFPIPVIEELLDELHGARFYSKLDLKSGYHQVRVKEEDIHKTAFR 493
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
Y+ + FGL +AP F L N V LL + V LV+ DD L+ SQD
Sbjct: 494 THEDHYEYLVMPFGLMNAPSTFQSLMNDVFRLLLRKFV--LVFFDDILVYSQDWKTHMEH 551
Query: 438 IFQTLPVNLSGNCSRSGRRSHPTHSLVAN 466
+ + L R TH LVAN
Sbjct: 552 VEEVL-------------RIMQTHGLVAN 567
>gi|38346034|emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]
Length = 1470
Score = 44.7 bits (104), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 589 DGSMRMCVDYRSLNEVTIKNKYPLPRIDNLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIP 648
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 649 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMEYLDKFV--VVFIDDILIYSKDE 705
>gi|341891414|gb|EGT47349.1| hypothetical protein CAEBREN_15307 [Caenorhabditis brenneri]
Length = 2250
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 321 NLKSLNSYVTTKKFKLIN-HQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
+ ++LN+ T + + N H+ + L K Y T+D Q + IP+ H + F
Sbjct: 1619 DFRALNAMTTPVQSVIPNIHEILDLCAGKTLY-TTLDFQQGFHQIPVEPLHCQRTAFACH 1677
Query: 380 GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
++ + GL +P F ++ N L++E R VY+DD +L S+++V
Sbjct: 1678 LGAFEYVRMPMGLKGSPGTFQRVMN---NLIKEMRARIFVYIDDMVLTSENAV 1727
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 15/207 (7%)
Query: 611 RPVFNLKSLNSYVTTKKFKLIN-HQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR--- 666
R + ++LN+ T + + N H+ + L K Y T+D Q + IP+ H +
Sbjct: 1615 RFTVDFRALNAMTTPVQSVIPNIHEILDLCAGKTLY-TTLDFQQGFHQIPVEPLHCQRTA 1673
Query: 667 FLCFLIPMDMSSFRPSL-SSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQ 725
F C L + L SPG + + ++E R VY+DD +L S++ +
Sbjct: 1674 FACHLGAFEYVRMPMGLKGSPGTFQRV-MNNLIKEMRARIFVYIDDMVLTSENAVQHLKD 1732
Query: 726 ILQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLL----QVRLPVDKIPPLRDR 780
+ + L + +G ++ +K + +P + +LG + + +D+ P R
Sbjct: 1733 VEEVLDKIEKIGMKLRPEKCKFALPE--IKFLGFVISKSGIHPNPEKTRAIDEYPTPRTV 1790
Query: 781 LQTQALIELKWFYHN-LTGFTPLHPPV 806
+ +A I + FY + F+ + P+
Sbjct: 1791 KEVRAFIGMASFYRRFIANFSKIAAPI 1817
>gi|270016066|gb|EFA12514.1| hypothetical protein TcasGA2_TC001405 [Tribolium castaneum]
Length = 1453
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 137/391 (35%), Gaps = 88/391 (22%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+GT+R + + LN+ + L + K + T+DL Y I + R
Sbjct: 636 ANGTIRLCVDYRKLNAVTKPDVYPLPRLDDLLHATGKIGCITTLDLQAGYWQIQVEPGDR 695
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER------GVRCLVYLDDFLLASQDP 719
F+ P + +R + G+ +RL ++ V L YLDD ++ S D
Sbjct: 696 DKTSFICPFGL--YRFTRMPFGLRNAPASFQRLMDKFKTGIPDVPILAYLDDLIIISPDG 753
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPS------HRVDYLGISWDTDLLQVRLPVDK 773
+ T L ++N K I S HR+ GI+ D ++ + +
Sbjct: 754 HTHIRHLRSTFDQLRRFQLRINRNKCLIGCSEVRYLGHRISPSGIAPDEKKVEA---IKQ 810
Query: 774 IPPLRDRLQTQALIE-LKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV 832
IPP R+ Q Q+ ++ WF + F V R + W
Sbjct: 811 IPPPRNLKQLQSFLQTCSWFRRFIDQFA----SVARPLSELTKKNASWK----------- 855
Query: 833 WTQAQRSWHINLKELFT----VRAAISSNP-------SLVANHTVVLQS---DNKTV--- 875
W AQ LKE T +RAA + P S A +LQ D + V
Sbjct: 856 WGNAQDEAFTTLKEKLTTAPILRAADPTQPFILRTDSSAYALGAALLQGEGPDERPVEYA 915
Query: 876 ------------------------IAYIRKQGGLRSHALLAETKKLLLIMS--------- 902
I+ R G S ++ + + L +MS
Sbjct: 916 SRLLTSSERNYSTTEREALAIVWAISKFRGYVGENSTTVITDHQALRWLMSLKTPTGRLA 975
Query: 903 KLNIHIVPY-----FIPGKCNSLADALSRQA 928
+ + + PY + PGK N++AD LSR A
Sbjct: 976 RWALQLQPYNLVIEYTPGKANTIADFLSRPA 1006
>gi|259484704|tpe|CBF81153.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 1562
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 557 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 615
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 616 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 665
Query: 434 L 434
+
Sbjct: 666 V 666
>gi|308510819|ref|XP_003117592.1| hypothetical protein CRE_00107 [Caenorhabditis remanei]
gi|308238238|gb|EFO82190.1| hypothetical protein CRE_00107 [Caenorhabditis remanei]
Length = 1895
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLL 410
T+DL Y IP+ + + F +Y+ L FGL ++P F A + V LL
Sbjct: 1092 FTTLDLLAGYWQIPLDEKSKEITAFAIGSELYEYNVLPFGLVTSPAVFQATMEAVVGDLL 1151
Query: 411 RERGVRCLVYLDDFLLA 427
G VY+DD L+A
Sbjct: 1152 ---GKTAYVYVDDLLIA 1165
>gi|33088067|gb|AAP82857.1| polymerase [Duck hepatitis B virus]
gi|33088071|gb|AAP82860.1| polymerase [Duck hepatitis B virus]
Length = 786
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 563
Query: 761 DTDLLQV 767
D + +++
Sbjct: 564 DENFMKI 570
>gi|301618701|ref|XP_002938751.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1439
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 28 QTLQLLTYLAQALIELKWFYHNLTGFTPL-----------HPPVPRTF-MSTDASDVGWG 75
+T+ +T L +L + W F+ L HP R F + DAS+ G
Sbjct: 760 KTIAPITALTSSLKKFCWTPEAQQAFSDLKNRFTSAPILKHPDPTRPFVLEVDASEYAIG 819
Query: 76 AMVGNVS-VQGVW----------TQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVL 122
A++ + VQG+ + +++++ + +EL +++A L+ A H +++
Sbjct: 820 AVLSQRNEVQGLLHPVAFFSKKLSSSEQNYDVGDRELLAIKSAFQEWRHLLEGAAHPILV 879
Query: 123 QSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
SD+K + Y+R LR + L S+ N H+ F PG N ADALSR
Sbjct: 880 FSDHKN-LEYLRSARRLRPC-----QARWALFFSRFNFHVT--FRPGSKNGKADALSR 929
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 22/138 (15%)
Query: 803 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 850
HP R F + DAS+ GA++ + VQG+ + +++++ + +EL +
Sbjct: 800 HPDPTRPFVLEVDASEYAIGAVLSQRNEVQGLLHPVAFFSKKLSSSEQNYDVGDRELLAI 859
Query: 851 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 860 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSARRLRPC-----QARWALFFSRFNFHV 913
Query: 909 VPYFIPGKCNSLADALSR 926
F PG N ADALSR
Sbjct: 914 T--FRPGSKNGKADALSR 929
>gi|147791774|emb|CAN66051.1| hypothetical protein VITISV_018870 [Vitis vinifera]
Length = 2913
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 65 MSTDASDVGWGAMVGNVS---------VQGVWTQAQRSWHINLKELFTVRAAISSNPSLV 115
+ TDASD+G+G ++ S G W AQ ++ KE+ ++ IS +
Sbjct: 1038 VETDASDIGFGGILKQRSNNQELLVRFTSGTWNHAQLNYSTIKKEILSIVLCISKFQDDL 1097
Query: 116 ANHTVVLQSDNKTVIAYIRKQ-GGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 174
N +L+ D K+ + ++K + S + A + I+S + I +I G+ NS+
Sbjct: 1098 LNQEFLLRVDCKSAKSVLQKDVKNIASKHIFA---RWQAILSNFDFQIE--YIKGENNSI 1152
Query: 175 ADALSRQAL 183
D L+R+ L
Sbjct: 1153 PDFLTREFL 1161
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 811 MSTDASDVGWGAMVGNVS---------VQGVWTQAQRSWHINLKELFTVRAAISSNPSLV 861
+ TDASD+G+G ++ S G W AQ ++ KE+ ++ IS +
Sbjct: 1038 VETDASDIGFGGILKQRSNNQELLVRFTSGTWNHAQLNYSTIKKEILSIVLCISKFQDDL 1097
Query: 862 ANHTVVLQSDNKTVIAYIRKQ-GGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 920
N +L+ D K+ + ++K + S + A + I+S + I +I G+ NS+
Sbjct: 1098 LNQEFLLRVDCKSAKSVLQKDVKNIASKHIFA---RWQAILSNFDFQIE--YIKGENNSI 1152
Query: 921 ADALSRQAL 929
D L+R+ L
Sbjct: 1153 PDFLTREFL 1161
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + ++ + N + + L K+ + D+ + I IA + R F+
Sbjct: 793 LVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAEKDRYKTAFV 852
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL +AP F + N + + +VY+DD L+ S DSV
Sbjct: 853 VPFGHYEWNVMPFGLKNAPSEFQNIMNEI---FNQFSDFIIVYIDDVLIYS-DSV 903
>gi|326676109|ref|XP_003200508.1| PREDICTED: hypothetical protein LOC100534899 [Danio rerio]
Length = 1721
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LN+ F L ++ L + +T+DL+ Y +P+A R
Sbjct: 718 DGSLRMCVDYRQLNAKTRKDAFPLPRIEESLDALTGARWFSTLDLASGYNQVPVAEEDRY 777
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGV------RCLVYLDDFLLASQDPI 720
F P + F + G+C +RL ER L+YLDD ++ S
Sbjct: 778 KTAFCTPFGLFEF--NRMPFGLCNAPSTFQRLMERIFGDQSFQSLLLYLDDVIIFSSS-- 833
Query: 721 VLKNQILQTLQLLTYLGWQVNLK 743
+Q LQ L+L+ Q NLK
Sbjct: 834 --VDQHLQRLELVLNRLRQQNLK 854
>gi|31506005|gb|AAP47822.1| polymerase [Duck hepatitis B virus]
Length = 786
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 563
Query: 761 DTDLLQV 767
D + +++
Sbjct: 564 DENFMKI 570
>gi|33088059|gb|AAP82851.1| polymerase [Duck hepatitis B virus]
gi|33088063|gb|AAP82854.1| polymerase [Duck hepatitis B virus]
Length = 786
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 563
Query: 761 DTDLLQV 767
D + +++
Sbjct: 564 DENFMKI 570
>gi|20136727|gb|AAM11780.1|AF493986_1 polymerase [Duck hepatitis B virus]
Length = 786
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 563
Query: 761 DTDLLQV 767
D + +++
Sbjct: 564 DENFMKI 570
>gi|311036249|gb|ADP55738.1| polymerase [Duck hepatitis B virus]
Length = 786
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 563
Query: 761 DTDLLQV 767
D + +++
Sbjct: 564 DENFMKI 570
>gi|116310820|emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 589 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIP 648
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 649 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 705
>gi|67516189|ref|XP_657980.1| hypothetical protein AN0376.2 [Aspergillus nidulans FGSC A4]
gi|40746626|gb|EAA65782.1| hypothetical protein AN0376.2 [Aspergillus nidulans FGSC A4]
gi|259489381|tpe|CBF89606.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 1376
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 607 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 665
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 666 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 715
Query: 434 L 434
+
Sbjct: 716 V 716
>gi|77555663|gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 589 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIP 648
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 649 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 705
>gi|67524425|ref|XP_660274.1| hypothetical protein AN2670.2 [Aspergillus nidulans FGSC A4]
gi|40743888|gb|EAA63072.1| hypothetical protein AN2670.2 [Aspergillus nidulans FGSC A4]
Length = 990
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 42 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 100
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 101 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 150
Query: 434 L 434
+
Sbjct: 151 V 151
>gi|317418923|emb|CBN80961.1| Retrovirus polyprotein [Dicentrarchus labrax]
Length = 1722
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+MR + + LNS F L ++ L + +T+DL+ Y +P+ R
Sbjct: 137 DGSMRMCVDYRQLNSKTRRDAFPLPRIEESLDALSGARWFSTLDLTSGYNQVPVTEADRP 196
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER---GVRC---LVYLDDFLLASQDPI 720
F P + F + G+C +RL +R +C L+YLDD ++ S
Sbjct: 197 KTAFCTPFGL--FEWNRMPFGLCNAPSTFQRLMQRIFGDQQCQSLLLYLDDIVVFSSTVE 254
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
++ L+ L + G + L K V+YLG
Sbjct: 255 QHVERLQVVLERLRHEGLKAKLSKCSFF-RKEVNYLG 290
>gi|301632044|ref|XP_002945101.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like, partial [Xenopus (Silurana) tropicalis]
Length = 1429
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 57 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 104
HP R F + DAS+ GA++ + VQ + + +++++ + +EL T+
Sbjct: 800 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSASEQNYDVGDRELLTI 859
Query: 105 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 162
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 860 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 913
Query: 163 VPYFIPGKCNSLADALSRQALIPD 186
F PG N ADALSR P+
Sbjct: 914 T--FRPGSKNGKADALSRLFPAPE 935
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 803 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 850
HP R F + DAS+ GA++ + VQ + + +++++ + +EL T+
Sbjct: 800 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSASEQNYDVGDRELLTI 859
Query: 851 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 860 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 913
Query: 909 VPYFIPGKCNSLADALSRQALIPD 932
F PG N ADALSR P+
Sbjct: 914 T--FRPGSKNGKADALSRLFPAPE 935
>gi|334404|gb|AAA91914.1| pol polyprotein [Simian immunodeficiency virus]
Length = 1046
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 343 PLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY-------KGTVYQRTCLSFGLASA 395
P +K + +D+ AY IP+ R++ F GT YQ CL G +
Sbjct: 293 PSGFEKMTEITVLDIGDAYYSIPLDPEFRKYTAFTIPSVNNQGPGTRYQFNCLPQGWKGS 352
Query: 396 PQAFAQLSNWVAVLLRE-----RGVRCLVYLDDFLLASQDSVVLKNQIFQTLPVNLS 447
P F N A +L E + + + Y+DD + SQ+ +++ + L + LS
Sbjct: 353 PTIF---QNTAASILEEIKKELKPLTIVQYMDDLWVGSQEDEYTHDRLVEQLRMKLS 406
>gi|427798051|gb|JAA64477.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 661
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS + L + L Y +++DL Y IP+ + F+
Sbjct: 356 DYRRLNSVTKKDVYPLPRIDDVIDCLHSASYFSSVDLRSGYWQIPMHPNDKEKTAFITPD 415
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR---CLVYLDDFLL 426
+++ + FGL +AP F + + + RG++ CL YLDD ++
Sbjct: 416 GLFEFNVMPFGLCNAPATFERFMDTIL-----RGLKWEVCLCYLDDIII 459
>gi|157587|gb|AAA28600.1| reverse transcriptase endonuclease [Drosophila virilis]
Length = 1009
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 341 KIPLFLQ---KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQ 397
+IP+ L K Y T+DL Y I +A R F Y+ L FGL +A
Sbjct: 233 RIPMILANLGKAKYFTTLDLKSGYHQIYLAEHDREKTSFSVSSGKYEFCRLPFGLRNASS 292
Query: 398 AFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQDSV 432
F + + +LRE G C VY+DD ++ S++
Sbjct: 293 IFQR---AIDDILREHIGKICFVYVDDVIIFSKNET 325
>gi|21741860|emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 589 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTEDIP 648
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 649 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 705
>gi|427781079|gb|JAA55991.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1142
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y ++IDL Y I + R F+ +YQ + FGL +AP F ++ +
Sbjct: 341 LSGAKYFSSIDLRSGYWQIAVDEMDREKTAFITPDGLYQFKVMPFGLCNAPATFERMMD- 399
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
A+L + CL YLDD ++ S
Sbjct: 400 -ALLHGFKWSICLCYLDDVIVFS 421
>gi|189242199|ref|XP_001812244.1| PREDICTED: similar to protease, reverse transcriptase, ribonuclease
H, integrase [Tribolium castaneum]
Length = 1437
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 137/391 (35%), Gaps = 88/391 (22%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+GT+R + + LN+ + L + K + T+DL Y I + R
Sbjct: 636 ANGTIRLCVDYRKLNAVTKPDVYPLPRLDDLLHATGKIGCITTLDLQAGYWQIQVEPGDR 695
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER------GVRCLVYLDDFLLASQDP 719
F+ P + +R + G+ +RL ++ V L YLDD ++ S D
Sbjct: 696 DKTSFICPFGL--YRFTRMPFGLRNAPASFQRLMDKFKTGIPDVPILAYLDDLIIISPDG 753
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPS------HRVDYLGISWDTDLLQVRLPVDK 773
+ T L ++N K I S HR+ GI+ D ++ + +
Sbjct: 754 HTHIRHLRSTFDQLRRFQLRINRNKCLIGCSEVRYLGHRISPSGIAPDEKKVEA---IKQ 810
Query: 774 IPPLRDRLQTQALIE-LKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV 832
IPP R+ Q Q+ ++ WF + F V R + W
Sbjct: 811 IPPPRNLKQLQSFLQTCSWFRRFIDQFA----SVARPLSELTKKNASWK----------- 855
Query: 833 WTQAQRSWHINLKELFT----VRAAISSNP-------SLVANHTVVLQS---DNKTV--- 875
W AQ LKE T +RAA + P S A +LQ D + V
Sbjct: 856 WGNAQDEAFTTLKEKLTTAPILRAADPTQPFILRTDSSAYALGAALLQGEGPDERPVEYA 915
Query: 876 ------------------------IAYIRKQGGLRSHALLAETKKLLLIMS--------- 902
I+ R G S ++ + + L +MS
Sbjct: 916 SRLLTSSERNYSTTEREALAIVWAISKFRGYVGENSTTVITDHQALRWLMSLKTPTGRLA 975
Query: 903 KLNIHIVPY-----FIPGKCNSLADALSRQA 928
+ + + PY + PGK N++AD LSR A
Sbjct: 976 RWALQLQPYNLVIEYTPGKANTIADFLSRPA 1006
>gi|50402587|gb|AAT76628.1| polyprotein [Candida glabrata]
Length = 1504
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN+ KF L + + L + +DL Y + + R F+
Sbjct: 572 DYRGLNNATVKSKFPLPLIEDVLDSLHGAKIFSKLDLISGYHQVSVNEPDRYKTSFITHE 631
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
YQ + FGL +AP F +L N AVL C+VYLDD L+ S+
Sbjct: 632 GQYQWNVMPFGLTNAPATFQRLMN--AVLRPYISKFCVVYLDDILIYSK 678
>gi|313243693|emb|CBY42338.1| unnamed protein product [Oikopleura dioica]
Length = 285
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKL------INHQKIPLFLQKNDYLATIDLSQAYCHIPI 366
+ + I + + LN + +F L + I L ++ +++++DLS+AY + +
Sbjct: 71 DKSIRISLDARGLNQLLVKDRFPLPHMTTVFSRIGIKLAAGESCFISSLDLSRAYWQVRV 130
Query: 367 ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFL 425
A L F Y G YQ + +G A+AP AF+++ + ++YLDD +
Sbjct: 131 AEEDAFKLAFSYNGRHYQANRMLYGTATAPSAFSRIMGKIMT-----HPSIIIYLDDLI 184
>gi|313239146|emb|CBY17748.1| unnamed protein product [Oikopleura dioica]
Length = 388
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVL 409
YLAT+D+ Y +I I + H+ ++K Q T L FGL ++ F++ L++ + +
Sbjct: 3 YLATLDIRAGYWNIRIKKEHQHKFSVMWKSENLQFTRLPFGLKTSGSIFSRALAHSLESV 62
Query: 410 LRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
+ ++ +Y+DD L+ S D + I Q L
Sbjct: 63 KHKSSLK--IYIDDLLIFSNDFKIFHETIDQVL 93
>gi|440795360|gb|ELR16485.1| hypothetical protein ACA1_307010 [Acanthamoeba castellanii str.
Neff]
Length = 100
Score = 44.3 bits (103), Expect = 0.35, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 35/130 (26%)
Query: 619 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSS 678
LN Y+ KFK ++ LQ +D+ I+L RF+C
Sbjct: 4 LNDYIELPKFKYEGLTELSQLLQPSDWHTAINLKD------------RFICVT------- 44
Query: 679 FRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGW 738
VC L G+R + Y+DD + Q + K + T Q+L LGW
Sbjct: 45 ---------VC-------HLHLMGMRVMAYMDDLFIIGQSKVKAKQAVELTQQVLKSLGW 88
Query: 739 QVNLKKSQII 748
+N +KS ++
Sbjct: 89 VINTEKSSLL 98
>gi|427798497|gb|JAA64700.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1125
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y ++IDL Y I + R F+ +YQ + FGL +AP F ++ +
Sbjct: 341 LSGAKYFSSIDLRSGYWQIAVDEMDREKTAFITPDGLYQFKVMPFGLCNAPATFERMMD- 399
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
A+L + CL YLDD ++ S
Sbjct: 400 -ALLHGFKWSICLCYLDDVIVFS 421
>gi|333967|gb|AAB03094.1| ORF3 [Rice tungro bacilliform virus]
Length = 1675
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1241 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDEFKDWTTFT 1300
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1301 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASNNE 1350
>gi|284434667|gb|ADB85376.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 839
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I + SLN K+ L + L+ + IDLS Y + I + + F
Sbjct: 470 ICVDYCSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLSSGYHQLKIRQEDIPKIAFS 529
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+ +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S
Sbjct: 530 TRYELYEYTVMSFGLTNAPAYFMNLMNKVFMEYLDKFV--IVFIDDILVYS 578
>gi|302309734|ref|XP_002999545.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049071|emb|CAR58026.1| unnamed protein product [Candida glabrata]
Length = 1504
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN+ KF L + + L + +DL Y + + R F+
Sbjct: 572 DYRGLNNATVKSKFPLPLIEDVLDSLHGAKIFSKLDLISGYHQVSVNEPDRYKTSFITHE 631
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
YQ + FGL +AP F +L N AVL C+VYLDD L+ S+
Sbjct: 632 GQYQWNVMPFGLTNAPATFQRLMN--AVLRPYISKFCVVYLDDILIYSK 678
>gi|156378576|ref|XP_001631218.1| predicted protein [Nematostella vectensis]
gi|156218254|gb|EDO39155.1| predicted protein [Nematostella vectensis]
Length = 198
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 781 LQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRS 839
L ++ EL+W+ +N L + P ++TDAS++GWGA+ N S G W+ ++
Sbjct: 76 LSRKSTAELEWWENNVLDNKNVISHGAPSHTLTTDASNLGWGAVFENDSTGGTWSVKEQK 135
Query: 840 WHINL 844
HIN
Sbjct: 136 HHINF 140
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 33 LTYLAQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQ 91
+T ++ EL+W+ +N L + P ++TDAS++GWGA+ N S G W+ +
Sbjct: 74 MTLSRKSTAELEWWENNVLDNKNVISHGAPSHTLTTDASNLGWGAVFENDSTGGTWSVKE 133
Query: 92 RSWHINL 98
+ HIN
Sbjct: 134 QKHHINF 140
>gi|326680534|ref|XP_003201542.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1673
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + LN+ ++ L L+ Y +DL AY I I + H
Sbjct: 450 DGGLRPCIDYRGLNAITVKYRYPLPLVPAALELLRTAKYFTKLDLRSAYNLIRIKKNHEW 509
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F Y+ + FGLA++P F N V + R V +VY+DD L+ S+
Sbjct: 510 KTAFSTSSGHYEYLVMPFGLANSPSVFQAFINDVFRDMLNRWV--IVYIDDILIYSE 564
>gi|28629158|gb|AAO49486.1|AF505512_1 polymerase [Duck hepatitis B virus]
Length = 786
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 563
Query: 761 DTDLLQV 767
D + +++
Sbjct: 564 DENFMKI 570
>gi|77555928|gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1269
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 338 NHQKIPLFLQKNDYLA------TIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFG 391
N +P+ + D LA + DL Y I + F Y+ +S+G
Sbjct: 523 NRYPLPIIDELLDELAGSCLFTSFDLRAGYHQIRMRPEDEHKTAFKTHNGHYEFRVMSYG 582
Query: 392 LASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ---DSVVLKNQIFQTL 442
L SAP F L N + L +GV LV+ DD L+ SQ D V L ++FQ L
Sbjct: 583 LTSAPATFQVLMNQILAPLLRKGV--LVFTDDILIYSQNLDDHVALLRRVFQLL 634
>gi|326669542|ref|XP_003199037.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1487
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + LN+ ++ L L+ Y +DL AY I I + H
Sbjct: 553 DGGLRPCIDYRGLNAITVKYRYPLPLVPAALELLRTAKYFTKLDLRSAYNLIRIKKNHEW 612
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F Y+ + FGLA++P F N V + R V +VY+DD L+ S+
Sbjct: 613 KTAFSTSSGHYEYLVMPFGLANSPSVFQAFINDVFRDMLNRWV--IVYIDDILIYSE 667
>gi|2982231|gb|AAC06354.1| DNA polymerase [Duck hepatitis B virus]
Length = 836
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 494 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 553
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 554 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 613
Query: 761 DTDLLQV 767
D + +++
Sbjct: 614 DENFMKI 620
>gi|229890765|emb|CAY56550.1| P194 protein [Rice tungro bacilliform virus]
Length = 1674
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + LQK + DL + H+ + + + F
Sbjct: 1234 IVYNYKRLNDNMVTDPFNIPHKISMINLLQKARIFSKFDLKAGFHHMKLKEDFKDWTTFT 1293
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1294 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASSNE 1343
>gi|31415506|gb|AAP44980.1| DNA polymerase [Duck hepatitis B virus]
Length = 836
Score = 44.3 bits (103), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 494 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 553
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 554 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 613
Query: 761 DTDLLQV 767
D + +++
Sbjct: 614 DENFMKI 620
>gi|325428|gb|AAA62819.1| polymerase [Duck hepatitis B virus]
Length = 786
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 563
Query: 761 DTDLLQV 767
D + +++
Sbjct: 564 DENFMKI 570
>gi|360043522|emb|CCD78935.1| KRAB-A domain-containing protein [Schistosoma mansoni]
Length = 1293
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ L + + + LN+ F L ++ + +T+DL+ Y + + + R+
Sbjct: 457 DSSLRLCIDYRRLNAIKKRDSFPLPRIDTTLDAMRGACWFSTLDLASGYWQVEVRPQDRK 516
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F+ +Y+ + FGL +AP F +L V L +CL+YLDD ++
Sbjct: 517 KTAFVVPNGLYEFQVMPFGLTNAPATFQRLMQTVLHGLVPH--KCLIYLDDIIV 568
>gi|301604212|ref|XP_002931768.1| PREDICTED: hypothetical protein LOC100493860 [Xenopus (Silurana)
tropicalis]
Length = 1108
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 67 TDAS-DVGWGAMVGNV-SVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 121
TDA+ +G+GA G +G W Q + ++ L ELF + AI + VV
Sbjct: 960 TDAAGSLGFGAFFGGRWCAEGWPEEWVQGGLTRNLTLLELFPIIVAIELWGRRFTDRKVV 1019
Query: 122 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR- 180
+DN +V+ I Q S +LA + L+L + NI +PG N +AD+LSR
Sbjct: 1020 FNTDNMSVVMAINNQTS-SSGPVLALLRHLVLRCLQFNICFQAQHLPGITNDIADSLSRF 1078
Query: 181 -----QALIP 185
Q L+P
Sbjct: 1079 QWDRFQRLVP 1088
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 813 TDAS-DVGWGAMVGNV-SVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 867
TDA+ +G+GA G +G W Q + ++ L ELF + AI + VV
Sbjct: 960 TDAAGSLGFGAFFGGRWCAEGWPEEWVQGGLTRNLTLLELFPIIVAIELWGRRFTDRKVV 1019
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR- 926
+DN +V+ I Q S +LA + L+L + NI +PG N +AD+LSR
Sbjct: 1020 FNTDNMSVVMAINNQTS-SSGPVLALLRHLVLRCLQFNICFQAQHLPGITNDIADSLSRF 1078
Query: 927 -----QALIP 931
Q L+P
Sbjct: 1079 QWDRFQRLVP 1088
>gi|67524427|ref|XP_660275.1| hypothetical protein AN2671.2 [Aspergillus nidulans FGSC A4]
gi|40743889|gb|EAA63073.1| hypothetical protein AN2671.2 [Aspergillus nidulans FGSC A4]
Length = 1630
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 682 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 740
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 741 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 790
Query: 434 L 434
+
Sbjct: 791 V 791
>gi|9629908|ref|NP_045937.1| Pr gag-pro-pol [Walleye dermal sarcoma virus]
gi|2801525|gb|AAC82611.1| Pr gag-pro-pol [Walleye dermal sarcoma virus]
Length = 1751
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVL 409
+ IDLS A+ +PI + + F ++G Y T L G +P F+Q L + +
Sbjct: 855 WFTVIDLSNAFFSVPIHKDSQYLFAFTFEGHQYTWTVLPQGFIHSPTLFSQALYQSLHKI 914
Query: 410 LRERGVRCLVYLDDFLLASQD 430
+ +Y+DD L+AS+D
Sbjct: 915 KFKISSEICIYMDDVLIASKD 935
>gi|338819284|sp|O92815.2|POL_WDSV RecName: Full=Gag-Pol polyprotein; Contains: RecName: Full=Matrix
protein p10; Short=MA; Contains: RecName: Full=p20;
Contains: RecName: Full=Capsid protein p25; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p14;
Short=NC-pol; Contains: RecName: Full=Protease p15;
Short=PR; Contains: RecName: Full=Reverse
transcriptase/ribonuclease H p90; Short=RT; Contains:
RecName: Full=Integrase p46; Short=IN
Length = 1752
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVL 409
+ IDLS A+ +PI + + F ++G Y T L G +P F+Q L + +
Sbjct: 856 WFTVIDLSNAFFSVPIHKDSQYLFAFTFEGHQYTWTVLPQGFIHSPTLFSQALYQSLHKI 915
Query: 410 LRERGVRCLVYLDDFLLASQD 430
+ +Y+DD L+AS+D
Sbjct: 916 KFKISSEICIYMDDVLIASKD 936
>gi|270015672|gb|EFA12120.1| hypothetical protein TcasGA2_TC002266 [Tribolium castaneum]
Length = 630
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L N I L K+ Y T+DL+ + + + F +
Sbjct: 357 DYRKLNEKTVNDKYPLPNITDILDKLGKSIYFTTLDLASGFHQVQMNPDDIEKTAFSTEN 416
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGV---RCLVYLDDFLLAS---QDSVVL 434
Y+ + FGL +AP F ++ + + RG+ +C VYLDD ++ S ++ +V
Sbjct: 417 GHYEYLRMPFGLKNAPATFQRVMDNIL-----RGIQNKKCFVYLDDIIIFSTSLEEHIVR 471
Query: 435 KNQIFQTL 442
++F+ L
Sbjct: 472 LKEVFERL 479
>gi|126643676|gb|ABO25842.1| gag-pro-pol polyprotein [Walleye dermal sarcoma virus]
Length = 1751
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVL 409
+ IDLS A+ +PI + + F ++G Y T L G +P F+Q L + +
Sbjct: 855 WFTVIDLSNAFFSVPIHKDSQYLFAFTFEGHQYTWTVLPQGFIHSPTLFSQALYQSLHKI 914
Query: 410 LRERGVRCLVYLDDFLLASQD 430
+ +Y+DD L+AS+D
Sbjct: 915 KFKISSEICIYMDDVLIASKD 935
>gi|403216037|emb|CCK70535.1| hypothetical protein KNAG_0E02760 [Kazachstania naganishii CBS
8797]
Length = 358
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS+ +F L + L + +++DL Y IPI + R FL
Sbjct: 193 DYRKLNSHTIKSRFPLPLIDNLFDQLAGAKFFSSLDLISGYHQIPIKDQDRMKTAFLTHE 252
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFLLAS 428
+ + FGL SAP F L N V LR+ + +VYLDD L+ S
Sbjct: 253 GQFAWRVMPFGLTSAPSTFQMLMNGV---LRDYLNKFVVVYLDDILVYS 298
>gi|31415504|gb|AAP44979.1| DNA polymerase [Duck hepatitis B virus]
Length = 836
Score = 44.3 bits (103), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 494 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 553
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 554 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 613
Query: 761 DTDLLQV 767
D + +++
Sbjct: 614 DENFMKI 620
>gi|88595579|gb|ABD43096.1| reverse transcriptase [Orobanche crenata]
Length = 143
Score = 43.9 bits (102), Expect = 0.38, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L + LQ + IDL Y H+ I F +
Sbjct: 5 DYRELNRVTIKNKYPLPRIDDLLDQLQGASIFSKIDLRSGYHHLRIRESDIARTAFRTRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL +AP F QL N V + ++ V +V++DD L+ S+D
Sbjct: 65 GHYEFVVMPFGLTNAPAVFMQLMNKVFIEYLDKCV--VVFIDDILIYSKD 112
>gi|301607367|ref|XP_002933296.1| PREDICTED: hypothetical protein LOC100495679 [Xenopus (Silurana)
tropicalis]
Length = 609
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 67 TDAS-DVGWGAMVGNVSVQGVWTQ--AQRSW--HINLKELFTVRAAISSNPSLVANHTVV 121
TDA+ +G+GA G W + W ++ L ELF + AI + VV
Sbjct: 461 TDAAGSLGFGAFFGGRWCAEGWPKEWVNEGWIRNLTLLELFPIIVAIELWGRQFTDRKVV 520
Query: 122 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+DN +V+ I Q S +LA + L+L + NI +PG N +AD+LSR
Sbjct: 521 FNTDNMSVVLAINNQTS-SSGPVLALLRHLVLRCLQFNICFQAQHLPGITNDIADSLSR 578
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 813 TDAS-DVGWGAMVGNVSVQGVWTQ--AQRSW--HINLKELFTVRAAISSNPSLVANHTVV 867
TDA+ +G+GA G W + W ++ L ELF + AI + VV
Sbjct: 461 TDAAGSLGFGAFFGGRWCAEGWPKEWVNEGWIRNLTLLELFPIIVAIELWGRQFTDRKVV 520
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+DN +V+ I Q S +LA + L+L + NI +PG N +AD+LSR
Sbjct: 521 FNTDNMSVVLAINNQTS-SSGPVLALLRHLVLRCLQFNICFQAQHLPGITNDIADSLSR 578
>gi|427798191|gb|JAA64547.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1000
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + Y ++IDL Y I + R F+ +YQ + FGL +AP F ++ +
Sbjct: 360 LSGSKYFSSIDLRSGYWQIAVDDMDREKTAFITPDGLYQFKVMPFGLCNAPATFERMMD- 418
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
A+L + CL YLDD ++ S
Sbjct: 419 -ALLHGFKWSICLCYLDDVIVFS 440
>gi|1706510|sp|P03162.2|DPOL_DHBV1 RecName: Full=Protein P; Includes: RecName: Full=DNA-directed DNA
polymerase; Includes: RecName: Full=RNA-directed DNA
polymerase; Includes: RecName: Full=Ribonuclease H
gi|325433|gb|AAA45742.1| DNA polymerase (putative; gene 6); putative [Duck hepatitis B
virus]
Length = 836
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 494 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 553
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 554 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 613
Query: 761 DTDLLQV 767
D + +++
Sbjct: 614 DENFMKI 620
>gi|391331905|ref|XP_003740380.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 1476
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ + +L+++N+ + F L + + + L + +D AY + +A R
Sbjct: 516 IRLCVDLRAVNAAIVADVFPLPHFEDLLTRLGSARVFSKLDARSAYHQVELAENSRDLTA 575
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F+ +++ + FGLASAP AF +L +L GV ++YLDD L+ ++
Sbjct: 576 FITPWGLFRFKRVPFGLASAPAAFQRLME--QILWGIEGV--IIYLDDVLIFGENE 627
>gi|301604558|ref|XP_002931946.1| PREDICTED: hypothetical protein LOC100494686 [Xenopus (Silurana)
tropicalis]
Length = 1006
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 67 TDASDV-GWGAMVGNVSVQGVWTQ--AQRSWHINLK--ELFTVRAAISSNPSLVANHTVV 121
TDA+ G+GA + W Q A R+ NL ELF + A+ ++N +V+
Sbjct: 858 TDAAGATGFGAYLAGKWCAAGWPQEWATRNLTGNLAFLELFPIIVAVELWGRELSNKSVL 917
Query: 122 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+SDN + + S +LA + L+L +LNI IPG+ N +ADALSR
Sbjct: 918 FRSDNMATVLAVNNLTS-SSRPVLALLRHLVLRCLQLNISFRAKHIPGEINEIADALSR 975
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 813 TDASDV-GWGAMVGNVSVQGVWTQ--AQRSWHINLK--ELFTVRAAISSNPSLVANHTVV 867
TDA+ G+GA + W Q A R+ NL ELF + A+ ++N +V+
Sbjct: 858 TDAAGATGFGAYLAGKWCAAGWPQEWATRNLTGNLAFLELFPIIVAVELWGRELSNKSVL 917
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+SDN + + S +LA + L+L +LNI IPG+ N +ADALSR
Sbjct: 918 FRSDNMATVLAVNNLTS-SSRPVLALLRHLVLRCLQLNISFRAKHIPGEINEIADALSR 975
>gi|326671944|ref|XP_001342610.4| PREDICTED: hypothetical protein LOC100002952 [Danio rerio]
Length = 1337
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 701 RGVRCLVYLDDFLLASQDPIVLKNQIL----QTLQLLTYLGWQVNLKKSQIIPSHRVDYL 756
+ V+CL YLDD+L+ L++Q++ + L+ L LG+QVN +KS++ P + Y
Sbjct: 280 QSVQCLNYLDDWLILDS----LRDQLIMHWDKVLRHLDQLGFQVNQEKSKLCPVQSIFYF 335
Query: 757 GISWDTDLLQVRLPVDK 773
G+ D+ + RL ++
Sbjct: 336 GLELDSVAVVARLSEER 352
>gi|348540738|ref|XP_003457844.1| PREDICTED: hypothetical protein LOC100707942, partial [Oreochromis
niloticus]
Length = 1970
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 20/216 (9%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + ++LNS F L + L + +T+DL+ Y +P+ + +
Sbjct: 564 DGSLRLCVDYRALNSKTRKDAFPLPRIDESLDALSGARWFSTLDLAAGYNQVPVTEKDKM 623
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER---GVRC---LVYLDDFLLASQDPI 720
F P + F + G+C +RL ER C L+YLDD ++ S
Sbjct: 624 KAAFCTPFGL--FEWNRMPFGLCNAPSTFQRLMERIFGDQHCQSLLLYLDDVIVFSSTVE 681
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYL-------GISWDTDLLQVRLPVDK 773
+++ L L G + L+K S V YL G+S D + ++ V K
Sbjct: 682 EHVSRLDVVLGRLQQEGLKAKLEKCSFFQSE-VSYLGHVMSRDGVSTDPNKIEA---VSK 737
Query: 774 IPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPR 808
P + ++ + +Y + GF L P+ R
Sbjct: 738 WPRPNHVSELRSFLGFASYYRRFVEGFAKLAAPLHR 773
>gi|326678302|ref|XP_003201038.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1217
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 138/383 (36%), Gaps = 74/383 (19%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++RP + + LNS + L LQ + +DL AY + + + H
Sbjct: 349 DGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGASFFTKLDLRNAYHLVRMKQGHEW 408
Query: 667 FLCFLIP---MDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCL-VYLDDFLLASQDPIVL 722
FL P + LS+ + LR+ + + VYLDD L+ S+
Sbjct: 409 KTAFLTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMIDQFIYVYLDDILIFSRSLQEH 468
Query: 723 KNQILQTLQLLTYLGWQVNLKK----SQIIP--SHRVDYLGISWDTDLLQ--VRLPVDKI 774
+ + LQ L G V +K +Q +P H V G+ D + +Q V P I
Sbjct: 469 VQHVRRVLQRLLENGLFVKAEKCVFHAQSVPFLGHIVSVEGVRMDPEKVQAVVNWP---I 525
Query: 775 PPLRDRLQ--------------------------TQALIELKWFYHNLTGFTPLH----- 803
P R LQ T A +W FT L
Sbjct: 526 PESRKALQRFLGFANFYRRFIRNFSQLAAPLTSLTSAKTPFRWSSAAQVAFTKLKSRFVS 585
Query: 804 ------PPVPRTF-MSTDASDVGWGAMVGNVSVQG-----------VWTQAQRSWHINLK 845
P R F + D S+VG GA++ + + A+R++ I +
Sbjct: 586 APILVTPDPARQFVVEVDTSEVGMGAILSQRAASDDRIHPCAFFSHRLSPAERNYDIGNR 645
Query: 846 ELFTVRAAISSNPSLVANHTV--VLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSK 903
EL V+ A+ + V ++ +D+K + YIR L S + L +
Sbjct: 646 ELLAVKLALEEWRHWLEGSGVPFIVWTDHKN-LEYIRSAKRLNSR-----QARWALFFGR 699
Query: 904 LNIHIVPYFIPGKCNSLADALSR 926
+ I + PG N DALSR
Sbjct: 700 FDFTI--SYRPGSKNIKPDALSR 720
>gi|326664020|ref|XP_003197713.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1459
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + LN+ ++ L L+ Y +DL AY I I + H
Sbjct: 547 DGGLRPCIDYRGLNAITVKYRYPLPLVPAALELLRTAKYFTKLDLRSAYNLIRIKKNHEW 606
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F Y+ + FGLA++P F N V + R V +VY+DD L+ S+
Sbjct: 607 KTAFSTSSGHYEYLVMPFGLANSPSVFQAFINDVFRDMLNRWV--IVYIDDILIYSE 661
>gi|67538144|ref|XP_662846.1| hypothetical protein AN5242.2 [Aspergillus nidulans FGSC A4]
gi|40743233|gb|EAA62423.1| hypothetical protein AN5242.2 [Aspergillus nidulans FGSC A4]
Length = 1678
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 673 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 731
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 732 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 781
Query: 434 L 434
+
Sbjct: 782 V 782
>gi|326437573|gb|EGD83143.1| hypothetical protein PTSG_12079 [Salpingoeca sp. ATCC 50818]
Length = 1848
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ T+DL+ AY P+A R+ F+ +Y+ + FGL +AP AF Q S A+
Sbjct: 16 FFTTLDLASAYHQCPLAEDARQKTAFITHTGLYEFQVVPFGLRNAP-AFFQRSMQAALA- 73
Query: 411 RERGVR-CLVYLDDFLLAS---QDSVVLKNQIFQTL 442
VR +YLDD LL S + + L +++ Q L
Sbjct: 74 ---DVRNACIYLDDILLFSSSFDEHIALLDKVLQRL 106
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ T+DL+ AY P+A R+ F+ +Y+ + FGL +AP AF Q S A+
Sbjct: 1087 FFTTLDLASAYHQCPLAEDARQKTAFITHTGLYEFQVVPFGLRNAP-AFFQRSMQAALA- 1144
Query: 411 RERGVR-CLVYLDDFLLAS---QDSVVLKNQIFQTL 442
VR +YLDD LL S + + L +++ Q L
Sbjct: 1145 ---DVRNACIYLDDILLFSSSFDEHIALLDKVLQRL 1177
>gi|363753098|ref|XP_003646765.1| hypothetical protein Ecym_5175 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890401|gb|AET39948.1| hypothetical protein Ecym_5175 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1410
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN + F L +++ + +T+DL Y IP+ + R F+
Sbjct: 695 DYRELNKITVSDPFPLPRIEEMLACIGDAKVFSTLDLHSGYHQIPMRKEDRAKTAFVTSE 754
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCL-VYLDDFLLAS 428
Y+ + FGL +AP FA+ + + RG+R + VYL D L+ S
Sbjct: 755 GKYEYLVMPFGLMNAPSTFARYMSEIF-----RGLRFVAVYLGDLLVYS 798
>gi|308488690|ref|XP_003106539.1| hypothetical protein CRE_15914 [Caenorhabditis remanei]
gi|308253889|gb|EFO97841.1| hypothetical protein CRE_15914 [Caenorhabditis remanei]
Length = 238
Score = 43.9 bits (102), Expect = 0.42, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSN 404
L +N + T+DL Y IP+ + F YQ + FGLA++P F A +
Sbjct: 93 LGENKWFTTLDLMAGYWQIPMEEGSKEKTAFAVLNEQYQFEVMPFGLATSPAIFQAAMEQ 152
Query: 405 WVAVLLRERGVRCLVYLDDFLLAS 428
+ L+ G VY+DD L+AS
Sbjct: 153 VLGDLI---GKSVFVYIDDILIAS 173
>gi|23477356|gb|AAN34651.1| pol protein [Drosophila melanogaster]
Length = 1006
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I + + LN K+ + N +I L +Y TIDL + + I + F
Sbjct: 211 IAIDYRYLNEITIADKYPIPNMDEILSKLGGCNYFTTIDLIKGFHQIEMDPESIPKTAFT 270
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
K Y+ T + FGL +AP F + N V L + C+VYLDD ++ S
Sbjct: 271 TKTGHYEYTRMPFGLKNAPATFQRCMNDVLRPLLNKI--CMVYLDDIIVFS 319
>gi|3319351|gb|AAC26240.1| contains similarity to reverse transcriptases (PFam: rvt.hmm,
score: 116.22) [Arabidopsis thaliana]
Length = 1322
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + LN K+ L ++ L+ + IDL+ Y IPIA R
Sbjct: 570 DGSFRLCIDYRGLNQVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSDYHQIPIAEADVR 629
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ + FGL +AP AF +L N V + V ++++DD L+ S+
Sbjct: 630 KTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFV--IIFIDDILVYSK 684
>gi|406702084|gb|EKD05152.1| hypothetical protein A1Q2_00573 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1043
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
+ +L +DL AY H+ + L F G Y CL+FG S+P F S
Sbjct: 249 FDADTWLWKMDLKDAYRHVVVDAADAALLGFHLDGKDYVDCCLNFGGKSSPFIFNMFSEA 308
Query: 406 VAVLLRERGVRCLVYLDDFL 425
+A +L G+R LDDF
Sbjct: 309 LAWILASFGLRNRHLLDDFF 328
>gi|342870919|gb|EGU73816.1| hypothetical protein FOXB_15673 [Fusarium oxysporum Fo5176]
Length = 355
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 2/146 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N L ++ + + LN+ + L ++ LQ +DL AY I I
Sbjct: 173 NGKLRLVVDYRKLNALTIKDRTPLPLITELKDRLQGKQIFTALDLKGAYNLIRIKEGDEW 232
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
F K +++ + FGL +AP F ++ N VL + V + YLDD L+ S D
Sbjct: 233 KTAFRTKFGLFEYLVMPFGLTNAPATFQRMIN--NVLRQYLDVFVVCYLDDILIFSDDEE 290
Query: 433 VLKNQIFQTLPVNLSGNCSRSGRRSH 458
K + + L N +SH
Sbjct: 291 EHKEHVHKVLKALQDANLLVEPEKSH 316
>gi|326667102|ref|XP_003198486.1| PREDICTED: uncharacterized protein K02A2.6-like [Danio rerio]
Length = 1177
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 324 SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVY 383
++N T+ + L +++ L + IDL+QAY + + +++ +Y
Sbjct: 343 TVNQVANTETYPLPRIEEVLATLSGGKVFSKIDLAQAYQQVLLDDDSKKYTTINTHKGLY 402
Query: 384 QRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS---VVLKNQIFQ 440
L+FG++SAP F ++ + L+++ ++ +VYLDD L+ +D + + +Q+ Q
Sbjct: 403 VYNRLAFGISSAPSIFQRI---MENLMKD--LKVVVYLDDLLIVGKDEQEHLSIVSQVLQ 457
Query: 441 TL 442
L
Sbjct: 458 RL 459
>gi|410026807|gb|AFV52543.1| DNA polymerase [Duck hepatitis B virus]
Length = 788
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNDIRFLGYQI 565
Query: 761 DTDLLQVR 768
D +++
Sbjct: 566 DQKFMKIE 573
>gi|391345509|ref|XP_003747028.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 772
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 324 SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVY 383
LN + + L N ++I N +DL+ AY +P+ +R+ +Y
Sbjct: 135 GLNEALRDVDYPLPNMEEIMSRFSGNRIFTQLDLADAYLQLPLTAENRKLTTINTHRGLY 194
Query: 384 QRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQT 441
Q L FGL +AP F + + L GV LVYLDD L+ + + + ++ Q
Sbjct: 195 QYNRLVFGLKTAPAIFQRTIDQALAGL--EGV--LVYLDDILVMAPEQELHDRRLRQV 248
>gi|427781081|gb|JAA55992.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1137
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + Y ++IDL Y I + R F+ +YQ + FGL +AP F ++ +
Sbjct: 340 LSGSKYFSSIDLRSGYWQIAVDDMDREKTAFITPDGLYQFKVMPFGLCNAPATFERMMD- 398
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
A+L + CL YLDD ++ S
Sbjct: 399 -ALLHGFKWSICLCYLDDVIVFS 420
>gi|9625572|ref|NP_039822.1| P-protein [Duck hepatitis B virus]
gi|81936185|sp|Q66403.1|DPOL_DHBVQ RecName: Full=Protein P; Includes: RecName: Full=DNA-directed DNA
polymerase; Includes: RecName: Full=RNA-directed DNA
polymerase; Includes: RecName: Full=Ribonuclease H
gi|59062|emb|CAA42769.1| P-protein [Duck hepatitis B virus]
Length = 788
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNDIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DQKFMKI 572
>gi|339245339|ref|XP_003378595.1| putative integrase core domain protein [Trichinella spiralis]
gi|316972483|gb|EFV56160.1| putative integrase core domain protein [Trichinella spiralis]
Length = 1096
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Query: 307 DIGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPI 366
D L N + + S+N +VT L + +DL +AY IP+
Sbjct: 333 DYRRLKNVTKPDRYPIPSINDFVTQ--------------LGGRTIFSKVDLIRAYQQIPV 378
Query: 367 ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFL 425
A +++ + FGL +A Q F + + V RG+R C VYLDD L
Sbjct: 379 AEEDIPKTAITTPFGLFEYVRMPFGLRNAAQTFQRFMDEVT-----RGLRFCFVYLDDVL 433
Query: 426 LASQ 429
+AS+
Sbjct: 434 VASR 437
>gi|118863|sp|P17193.1|DPOL_HPBDW RecName: Full=Protein P; Includes: RecName: Full=DNA-directed DNA
polymerase; Includes: RecName: Full=RNA-directed DNA
polymerase; Includes: RecName: Full=Ribonuclease H
gi|325446|gb|AAA45751.1| P protein [Duck hepatitis B virus]
Length = 788
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNDIRFLGYQI 565
Query: 761 DTDLLQVR 768
D +++
Sbjct: 566 DQKFMRIE 573
>gi|67538600|ref|XP_663074.1| hypothetical protein AN5470.2 [Aspergillus nidulans FGSC A4]
gi|40743440|gb|EAA62630.1| hypothetical protein AN5470.2 [Aspergillus nidulans FGSC A4]
gi|259485081|tpe|CBF81850.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 608
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 134 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 192
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 193 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 242
Query: 434 L 434
+
Sbjct: 243 V 243
>gi|48686545|emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
Length = 1839
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 92/242 (38%), Gaps = 24/242 (9%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++FN K LN ++ L Q I + + DL + + +A + F
Sbjct: 1349 LVFNYKRLNDNTEKDQYSLPGIQTILKRVGNKKIFSKFDLKSGFHQVAMAEESIPWTAFW 1408
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
+Y+ + FGL +AP F + + E VY+DD L+ S++
Sbjct: 1409 VPQGLYEWLVMPFGLKNAPAVFQRKMDQCFKGTEE---FIAVYIDDILVFSENMAEHTKH 1465
Query: 438 IFQTLPVNLSGNCSRSGRRSHPTHSLVANH------TVVLQSDNKTVITYIRKQVGLRSN 491
I L + C +G P+ +A TV+ Q K I+K V ++N
Sbjct: 1466 IGIMLKI-----CQENGLVLSPSKICLAQREIEFLGTVISQGQMKLQAHVIKKIVN-KAN 1519
Query: 492 ALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI-------PDWHLLPSLTE 544
L TK L + LN + +IP L+ ++ + DWHL+ + +
Sbjct: 1520 MELETTKGLRSFLGLLNYARI--YIPNLGRKLSPLYAKTSPTGEKRFNRQDWHLIKEIKD 1577
Query: 545 SV 546
V
Sbjct: 1578 MV 1579
>gi|3218461|emb|CAA06987.1| polymerase [Duck hepatitis B virus]
Length = 788
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASNSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGVRINFDKTTPSPVNDIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DQKFMKI 572
>gi|330946808|ref|XP_003306805.1| hypothetical protein PTT_20047 [Pyrenophora teres f. teres 0-1]
gi|311315521|gb|EFQ85099.1| hypothetical protein PTT_20047 [Pyrenophora teres f. teres 0-1]
Length = 170
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 16/122 (13%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLF-------LQKNDYLATIDLSQAYCHIPIA 367
G+ I + + LN++ I +Q PL L K + + +++ A+ I I
Sbjct: 27 GIRICVDYRGLNAHT-------IKNQNTPLLIRDMLTKLSKAKFFSKVNIIAAFNKIWIK 79
Query: 368 RRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLA 427
H+ F+ +YQ T + FG+ ++P F N VL + C+ YLD+ ++
Sbjct: 80 EEHKHLSAFITLYGLYQYTIMPFGMCNSPGTFQAYIN--DVLYKYLDEFCIAYLDNVIIF 137
Query: 428 SQ 429
S+
Sbjct: 138 SE 139
>gi|40786837|gb|AAR89929.1| polymerase protein [Duck hepatitis B virus]
Length = 787
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPFNPASSSRLAISDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNAISHSVCSFLQELGVRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQVR 768
D L++
Sbjct: 565 DQKYLKIE 572
>gi|341891627|gb|EGT47562.1| hypothetical protein CAEBREN_01908 [Caenorhabditis brenneri]
Length = 2052
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + + +N V L N + L T+DL Y IP+ + +
Sbjct: 1164 DGSVRMCIDYRKVNKVVRYNAHPLPNIEATLQSLSGKKVFTTLDLLAGYWQIPLKEQSKE 1223
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +++ L FGL ++P F A + + + +L G+ VY+DD L+AS+
Sbjct: 1224 ITAFAIGSELFEWNVLPFGLVTSPAIFQATMESVIGDML---GICAFVYVDDLLIASE 1278
>gi|9625571|ref|NP_039821.1| hypothetical protein DHBVgp3 [Duck hepatitis B virus]
gi|59061|emb|CAA42768.1| unnamed protein product [Duck hepatitis B virus]
Length = 838
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 496 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 555
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 556 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNDIRFLGYQI 615
Query: 761 DTDLLQV 767
D +++
Sbjct: 616 DQKFMKI 622
>gi|397344|emb|CAA52700.1| polymerase [Duck hepatitis B virus]
Length = 836
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 494 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISPR 553
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 554 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 613
Query: 761 DTDLLQV 767
D + +++
Sbjct: 614 DENFMKI 620
>gi|391327412|ref|XP_003738194.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 1027
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y +T+DL++AY I + ++ LC ++Q L FG+ +AP F Q+ + +
Sbjct: 407 YFSTVDLAEAYLQIEVRDDCKKMLCINTPKGLFQYNRLPFGVKTAPATFQQMIDTMIT-- 464
Query: 411 RERGV-RCLVYLDDFLLASQD 430
GV YLDD ++ +D
Sbjct: 465 ---GVPNTAAYLDDIVVTGKD 482
>gi|189242191|ref|XP_001810599.1| PREDICTED: similar to pol polyprotein [Tribolium castaneum]
Length = 1388
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
+ ++LN+ F + N Q + + + +D+++ Y + + + R F
Sbjct: 367 IDFRALNAITKRDYFPIPNIQDTIDSIGGAEIFSKLDMTKGYWQVEVEEKDREKTAFSVP 426
Query: 380 GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL ++P + +L AVL G C VYLDD ++ S++ +
Sbjct: 427 WGHYEWNRMPFGLVNSPSTWQRL--MYAVLSGLTGTHCYVYLDDVIVFSKNDM 477
>gi|158931143|sp|P27980.2|POL_SIVVG RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol;
Contains: RecName: Full=Matrix protein p17; Short=MA;
Contains: RecName: Full=Capsid protein p24; Short=CA;
Contains: RecName: Full=Nucleocapsid protein p7;
Short=NC; Contains: RecName: Full=p6-pol; Short=p6*;
Contains: RecName: Full=Protease; AltName: Full=PR;
AltName: Full=Retropepsin; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; AltName:
Full=Exoribonuclease H; AltName: Full=p66 RT; Contains:
RecName: Full=p51 RT; Contains: RecName: Full=p15;
Contains: RecName: Full=Integrase; Short=IN
Length = 1465
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 343 PLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY-------KGTVYQRTCLSFGLASA 395
P +K + +D+ AY IP+ R++ F GT YQ CL G +
Sbjct: 712 PSGFEKMTEITVLDIGDAYYSIPLDPEFRKYTAFTIPSVNNQGPGTRYQFNCLPQGWKGS 771
Query: 396 PQAFAQLSNWVAVLLRE-----RGVRCLVYLDDFLLASQDSVVLKNQIFQTLPVNLS 447
P F N A +L E + + + Y+DD + SQ+ +++ + L + LS
Sbjct: 772 PTIF---QNTAASILEEIKKELKPLTIVQYMDDLWVGSQEDEYTHDRLVEQLRMKLS 825
>gi|9627249|ref|NP_041734.1| polyprotein [Cacao swollen shoot virus]
gi|347871|gb|AAA03171.1| polyprotein [Cacao swollen shoot virus]
Length = 1834
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 92/242 (38%), Gaps = 24/242 (9%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++FN K LN ++ L Q I + + DL + + +A + F
Sbjct: 1344 LVFNYKRLNDNTEKDQYSLPGIQTILKRVGNKKVFSKFDLKSGFHQVAMAEESIPWTAFW 1403
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
+Y+ + FGL +AP F + + E VY+DD L+ S++
Sbjct: 1404 VPQGLYEWLVMPFGLKNAPAVFQRKMDQCFKGTEE---FIAVYIDDILVFSENMAEHTKH 1460
Query: 438 IFQTLPVNLSGNCSRSGRRSHPTHSLVANH------TVVLQSDNKTVITYIRKQVGLRSN 491
I L + C +G P+ +A TV+ Q K I+K V ++N
Sbjct: 1461 IGIMLKI-----CQENGLVLSPSKICLAQREIEFLGTVISQGQMKLQAHVIKKIVN-KAN 1514
Query: 492 ALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI-------PDWHLLPSLTE 544
L TK L + LN + +IP L+ ++ + DWHL+ + +
Sbjct: 1515 IELETTKGLRSFLGLLNYARI--YIPNLGRKLSPLYAKTSPTGEKRFNRQDWHLIKEIKD 1572
Query: 545 SV 546
V
Sbjct: 1573 MV 1574
>gi|313239147|emb|CBY17749.1| unnamed protein product [Oikopleura dioica]
Length = 883
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+++++DLS+AY + +A L F Y G YQ + +G A+AP AF+++ +
Sbjct: 738 FISSLDLSRAYWQVRVAEEDAFKLAFSYNGRHYQANRMLYGTATAPSAFSRIMGKIMTY- 796
Query: 411 RERGVRCLVYLDDFL 425
++YLDD +
Sbjct: 797 ----PSIIIYLDDLI 807
>gi|301631326|ref|XP_002944749.1| PREDICTED: transposon Ty3-I Gag-Pol polyprotein-like [Xenopus
(Silurana) tropicalis]
Length = 1182
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCF-LYKGT-VYQRTCLSFGLASAPQAFAQLSNWVAVL 409
+ +DLSQAY IP+ R++L +KG VY R L FG+ SAP F + V
Sbjct: 102 FSKLDLSQAYLQIPVHENSRKYLTITTHKGMFVYNR--LPFGITSAPSIFQRAMEQVLQG 159
Query: 410 LRERGVRCLVYLDDFLLASQDSV 432
L V C +LDD L+ +D
Sbjct: 160 L--PSVHC--FLDDILITGRDDA 178
>gi|67524513|ref|XP_660318.1| hypothetical protein AN2714.2 [Aspergillus nidulans FGSC A4]
gi|40743826|gb|EAA63012.1| hypothetical protein AN2714.2 [Aspergillus nidulans FGSC A4]
Length = 936
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 543 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 601
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 602 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 651
Query: 434 L 434
+
Sbjct: 652 V 652
>gi|308475526|ref|XP_003099981.1| hypothetical protein CRE_20844 [Caenorhabditis remanei]
gi|308266033|gb|EFP09986.1| hypothetical protein CRE_20844 [Caenorhabditis remanei]
Length = 355
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + + +N + L N + L L T DL Y +P+ +
Sbjct: 192 DGSVRMCIDYRKVNLLIKYNAHPLPNIETTLLSLAGKKVFTTFDLLAGYWQLPLKEESKE 251
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F +++ L FGLA++P F A + V LL G VY+DD L+AS++
Sbjct: 252 ITAFAIGSELFEWNVLPFGLATSPAIFQAAMECVVGDLL---GTCVFVYVDDLLIASEN 307
>gi|48696606|ref|YP_024968.1| polymerase [Ross's goose hepatitis B virus]
gi|325441|gb|AAA45748.1| polymerase [Ross's goose hepatitis B virus]
Length = 785
Score = 43.9 bits (102), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 443 SLDLSQAFYHLPLNPACSSRLAISDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 502
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L ++ L LG ++N K+ P + +LG
Sbjct: 503 FNVWTFTYMDDFLLCHPNARHLNSRSHAVCSFLQELGVRINFDKTTPSPVTEIKFLGYLI 562
Query: 761 DTDLLQV 767
D +++
Sbjct: 563 DDKFMKI 569
>gi|406700077|gb|EKD03262.1| retrotransposon nucleocapsid protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1175
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN+ ++ L + L++ + IDL AY + IA
Sbjct: 284 DGSLRLCVDYRKLNAVTVKNRYPLPLIGDLLDQLRQAKVYSKIDLRGAYHLLRIAEGDEW 343
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
F K ++ + FGL +AP +F L N + + + + +VYLDD L+ SQ+
Sbjct: 344 KTAFRTKYGAFEYKVMPFGLTNAPASFQHLMNHIFRDMLD--ISVIVYLDDILIFSQNET 401
Query: 433 VLKNQIFQTL 442
+ + + L
Sbjct: 402 EHRGHVREVL 411
>gi|67515445|ref|XP_657608.1| hypothetical protein AN0004.2 [Aspergillus nidulans FGSC A4]
gi|40746167|gb|EAA65323.1| hypothetical protein AN0004.2 [Aspergillus nidulans FGSC A4]
Length = 1363
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 544 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 602
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 603 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 652
Query: 434 L 434
+
Sbjct: 653 V 653
>gi|302319038|gb|ADL14709.1| P protein [Duck hepatitis B virus]
Length = 787
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DDKFMKI 571
>gi|301614235|ref|XP_002936598.1| PREDICTED: uncharacterized protein K02A2.6-like [Xenopus (Silurana)
tropicalis]
Length = 1368
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 114/289 (39%), Gaps = 63/289 (21%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQV 767
Y DD LL +L +++ + L G ++ +K +I + V++LG S D +
Sbjct: 625 YFDDVLLMGPSESILADRLREVLSRFDSSGIRLKKEKCEIGAT-SVNFLGYSIDAS--GI 681
Query: 768 RLPVDKIPPLRD------RLQTQALIELKWFYHNL-----TGFTPLH------------P 804
R K+ + D + + QA + L FYH+ T PLH P
Sbjct: 682 RPTESKVKAIHDAPEPKSKQELQAFLGLLNFYHSFLAHKATVAEPLHRLLDKGVPWNWTP 741
Query: 805 PVPRTF-----------------------MSTDASDVGWGAMVGNVSVQG---------- 831
F ++TDAS G GA++ ++ G
Sbjct: 742 KHSEAFCKVKQLLTSDSLLVHYDEDRPLILTTDASPYGVGAVLSHILPNGKEAPVAYYSR 801
Query: 832 VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALL 891
T A+R++ KE + A + + + HT + +D+K ++ + K + +
Sbjct: 802 TMTSAERNYAQIDKEALAIIAGVKKFHNYLYGHTFEIHTDHKPLLGLLSKDSPT-PNVMS 860
Query: 892 AETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQAL-IPDWHLLPSL 939
+ +++S + ++ + PGK ADALSR L IPD L P L
Sbjct: 861 PRMLRWSIMLSAYDYTLL--YKPGKSILNADALSRLPLQIPDCSLPPLL 907
>gi|270017026|gb|EFA13472.1| hypothetical protein TcasGA2_TC016332 [Tribolium castaneum]
Length = 1302
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS ++ + + Q LQ +TIDL +AY I +A
Sbjct: 503 DYRKLNSITVPDRYPIPHVQDFAYKLQGKKVFSTIDLVRAYQQIAVADEDIPKTAVCTPF 562
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK---NQ 437
+++ T + FGL +A Q F + N V L C Y+DD L+AS+ K +
Sbjct: 563 GLFEFTVMCFGLRNAAQTFQRHVNAVLGDLD----FCHAYIDDILIASESPEEHKQHLKE 618
Query: 438 IFQTL 442
+F+ L
Sbjct: 619 VFERL 623
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 15/158 (9%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R + + LNS ++ + + Q LQ +TIDL +AY I +A
Sbjct: 496 GQWRACGDYRKLNSITVPDRYPIPHVQDFAYKLQGKKVFSTIDLVRAYQQIAVADEDIPK 555
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR--------CLVYLDDFLLASQDP 719
P + F +C ++ + +R V C Y+DD L+AS+ P
Sbjct: 556 TAVCTPFGLFEFT------VMCFGLRNAAQTFQRHVNAVLGDLDFCHAYIDDILIASESP 609
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
K + + + L VN K + V+YLG
Sbjct: 610 EEHKQHLKEVFERLRQHNLVVNPAKC-VFGVEEVEYLG 646
>gi|294878503|ref|XP_002768394.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239870772|gb|EER01112.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 243
Score = 43.9 bits (102), Expect = 0.48, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 37/253 (14%)
Query: 707 VYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDT---- 762
VYLDD L+ S+ + +LL G + +K + + RV YLG +++
Sbjct: 13 VYLDDVLIFSRSDGEHLEHLRIVFELLRVAGMTLAAEKCEFM-QDRVTYLGHMFNSTGMS 71
Query: 763 -DLLQVRLPVDKIPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTF-MSTDASDVGW 820
DL + ++ + DR Q A + L + P R F + TDASDV
Sbjct: 72 PDLGKAEWGKEEELAVNDRKQWIASLPLLAY-----------PDFSRPFQLMTDASDVAI 120
Query: 821 GAMVGN-----VSVQGVWTQAQRSWHINLKELFTVRAAISS-NPSLVANH-TVVLQSDNK 873
GA+V T Q+ W + +E + + + P L H +V+ SD+K
Sbjct: 121 GAVVEQDGRPLAFCSQSLTPTQKVWPVYEREAYAIFKTLERFRPLLWGYHLELVVFSDHK 180
Query: 874 TVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDW 933
+ +I+ A A+ ++ L+ MS+ + ++ GK N +ADALSR D
Sbjct: 181 P-LEWIQT-------ATTAKVQRWLISMSQFKFKV--FYEKGKHNVVADALSRITTSDDK 230
Query: 934 HLLPSLTESVFQR 946
P L FQR
Sbjct: 231 MPEPDL--GAFQR 241
>gi|242825158|ref|XP_002488383.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218712201|gb|EED11627.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 748
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 18/84 (21%)
Query: 356 DLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAP---QAFAQLSNWVAVLLRE 412
D+ A+ +P+A+ ++ L F + + Y CL FGLA+AP FA+ +WV
Sbjct: 353 DIKDAFRIVPVAQDNQYLLAFQWNNSTYVECCLLFGLATAPFLFNLFAEALHWV------ 406
Query: 413 RGVRCLV-------YLDDFLLASQ 429
++CL+ YLDDF+ +
Sbjct: 407 --LQCLLPTFYINHYLDDFIAVTH 428
Score = 43.5 bits (101), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 78/189 (41%), Gaps = 29/189 (15%)
Query: 778 RDRLQTQALIELKWFYHNLTGFTP--LHPPVPR--TFMSTDASDVGWGAMV-GNVSVQGV 832
R R+ + +L+W+ +L+ F L P R T + TDAS G G + S
Sbjct: 545 RRRIPYEVRDDLEWWRDSLSLFNGVLLVDPCRRNITHLYTDASTTGQGLFFFSSKSTLDC 604
Query: 833 WTQ---------------AQRSW-HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVI 876
W AQ + HIN E+ + +HT+V+ +D+ T
Sbjct: 605 WRTHCHQLQSCNAASLALAQDAHAHINTTEVDAILQGFLLFSHHWLHHTLVIHTDSST-- 662
Query: 877 AYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQ------ALI 930
AY G K LL++ + +I IVP+++P N+LADALSR L
Sbjct: 663 AYTGLSKGFLRGPPNVPLKSLLILAAARDIQIVPHWLPSGENTLADALSRNNFQEIANLC 722
Query: 931 PDWHLLPSL 939
P W L L
Sbjct: 723 PHWQDLSVL 731
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 466 NHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLAD 525
+HT+V+ +D+ T T + K G K LL++ + +I IVP+++P N+LAD
Sbjct: 651 HHTLVIHTDSSTAYTGLSK--GFLRGPPNVPLKSLLILAAARDIQIVPHWLPSGENTLAD 708
Query: 526 ALSRQ------ALIPDWHLLPSL 542
ALSR L P W L L
Sbjct: 709 ALSRNNFQEIANLCPHWQDLSVL 731
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 95 HINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLI 154
HIN E+ + +HT+V+ +D+ T AY G K LL++
Sbjct: 629 HINTTEVDAILQGFLLFSHHWLHHTLVIHTDSST--AYTGLSKGFLRGPPNVPLKSLLIL 686
Query: 155 MSKLNIHIVPYFIPGKCNSLADALSRQ------ALIPDWHLLPSL 193
+ +I IVP+++P N+LADALSR L P W L L
Sbjct: 687 AAARDIQIVPHWLPSGENTLADALSRNNFQEIANLCPHWQDLSVL 731
>gi|189242129|ref|XP_001810711.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1577
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLF------LQKNDYLATIDLSQAYCHIPIARR 369
+ + + ++LN+ ++ L PL L N Y ++DL+Q Y +P+
Sbjct: 719 MRLCIDYRALNAITVKDRYPL------PLIADQLDRLAGNRYFTSLDLAQGYHQVPMHSD 772
Query: 370 HRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F+ Y+ + FGLA++P F ++ N + +R V L Y+DD L+ S
Sbjct: 773 SIHKTAFVTPDGHYEYLRVPFGLANSPAVFQRIINQMLGNMRHDQV--LAYMDDLLIPSV 830
Query: 430 D 430
D
Sbjct: 831 D 831
>gi|427780723|gb|JAA55813.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 582
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y ++IDL Y I + + + F+ +YQ + FGL +AP F ++ +
Sbjct: 162 LHGARYFSSIDLRSGYWQIAVDDKDQEKTAFVTPDGLYQFKVMPFGLCNAPATFERMMD- 220
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
++L + CL YLDD L+ S
Sbjct: 221 -SLLQGFKWSTCLCYLDDVLVFS 242
>gi|270016830|gb|EFA13276.1| hypothetical protein TcasGA2_TC016027 [Tribolium castaneum]
Length = 1504
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLF------LQKNDYLATIDLSQAYCHIPIARR 369
+ + + ++LN+ ++ L PL L N Y ++DL+Q Y +P+
Sbjct: 719 MRLCIDYRALNAITVKDRYPL------PLIADQLDRLAGNRYFTSLDLAQGYHQVPMHSD 772
Query: 370 HRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F+ Y+ + FGLA++P F ++ N + +R V L Y+DD L+ S
Sbjct: 773 SIHKTAFVTPDGHYEYLRVPFGLANSPAVFQRIINQMLGNMRHDQV--LAYMDDLLIPSV 830
Query: 430 D 430
D
Sbjct: 831 D 831
>gi|259486375|tpe|CBF84162.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 944
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 551 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 609
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 610 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 659
Query: 434 L 434
+
Sbjct: 660 V 660
>gi|427791111|gb|JAA61007.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1189
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y +TIDL Y I + R F+ +YQ + FGL +AP F ++ + ++L
Sbjct: 430 YFSTIDLRSGYWQIAVDDMDREKTAFVTPDGLYQFKVMPFGLCNAPATFERMMD--SLLQ 487
Query: 411 RERGVRCLVYLDDFLLAS 428
+ CL YLDD ++ S
Sbjct: 488 GFKWSTCLCYLDDVIVFS 505
>gi|427780691|gb|JAA55797.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1102
Score = 43.9 bits (102), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS + L + L Y +++DL Y IP+ + F+
Sbjct: 306 DYRRLNSVTKKDVYPLPRIDDVIDCLHSASYFSSVDLRSGYWQIPMHPNDKEKTAFITPD 365
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR---CLVYLDDFLL 426
+++ + FGL +AP F + + + RG++ CL YLDD ++
Sbjct: 366 GLFEFNVMPFGLCNAPATFERFMDTIL-----RGLKWEVCLCYLDDIII 409
>gi|228423|prf||1803562C pol protein
Length = 837
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 495 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 554
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 555 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 614
Query: 761 DTDLLQV 767
D +++
Sbjct: 615 DQRFMKI 621
>gi|341882749|gb|EGT38684.1| hypothetical protein CAEBREN_28147 [Caenorhabditis brenneri]
Length = 411
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 134/332 (40%), Gaps = 70/332 (21%)
Query: 645 YLATIDLSQAY--CHIP-------IARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLG 695
Y + IDL+ AY C + + HRR C+ + PS G+ + +
Sbjct: 64 YFSQIDLADAYLQCEVDEQAKQLLVINTHRRLFCY-------NRLPS----GIKSALGIF 112
Query: 696 RRLRERGVRCL----VYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSH 751
+ +R + L YLDD ++ ++ +Q L G+++ ++K + H
Sbjct: 113 QSFMDRLINGLDGTSAYLDDLIVTGSSIEEHNRRVHAVMQKLQEFGFRIRMEKCSFL-QH 171
Query: 752 RVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFM 811
+ Y +W + + D+I + LQ+ L LT F P P + +
Sbjct: 172 EIKY---TWTH---ECQKSFDRIKKI---LQSDLL---------LTHFDPNLPII----V 209
Query: 812 STDASDVGWGAMVGN----------VSVQGVWTQAQRSWHINLKELFTVRAAISSNPSLV 861
+ DAS G GA++ + + + Q+++ KE F + A++ +
Sbjct: 210 AADASQYGVGAVISHRFPDGSEKAIYHISKALSTTQQNYSQIEKEAFGLITAVTKFHQFI 269
Query: 862 ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLA 921
L++++K ++A + G+ H+ ++ +IM LN +I K A
Sbjct: 270 HGRHFTLRTNHKPLLAIFGGKKGVPGHS-ANRLQRWAIIM--LNYSFDIEYINTKDFGQA 326
Query: 922 DALSR------QALIPDWHLLP----SLTESV 943
DALSR A P+ H++ +T+SV
Sbjct: 327 DALSRLISERAAAQEPEDHIIAQVEVDMTDSV 358
>gi|18026842|gb|AAL55651.1|AF220561_3 P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1243 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFT 1302
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1303 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASNNE 1352
>gi|130405|sp|P04323.1|POL3_DROME RecName: Full=Retrovirus-related Pol polyprotein from transposon
17.6; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
gi|1335613|emb|CAA25702.1| unnamed protein product [Drosophila melanogaster]
gi|224319|prf||1101404B ORF 2
Length = 1058
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I+ + + LN + + N +I L + +Y TIDL++ + I + F
Sbjct: 264 IVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFS 323
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
K Y+ + FGL +AP F + N + L + CLVYLDD ++ S
Sbjct: 324 TKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNK--HCLVYLDDIIVFS 372
>gi|241690754|ref|XP_002412910.1| hypothetical protein IscW_ISCW011925 [Ixodes scapularis]
gi|215506712|gb|EEC16206.1| hypothetical protein IscW_ISCW011925 [Ixodes scapularis]
Length = 737
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 324 SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVY 383
++N T +K+ L + + L + +DL AY + + R+++ ++
Sbjct: 419 TINPVATVEKYPLPRVEDLWSALSGGQKFSKLDLRDAYQQLVLQDAARKYVTISTTMGLF 478
Query: 384 QRTCLSFGLASAPQAFA-QLSNWVAVLLRERGVR-CLVYLDDFLLASQD 430
Q T L FG+ASAP F ++ N RG+R VYLDD L+ D
Sbjct: 479 QYTRLPFGVASAPAIFQREMGNLF------RGMRHVAVYLDDILVTGTD 521
>gi|340376672|ref|XP_003386856.1| PREDICTED: hypothetical protein LOC100632495 [Amphimedon
queenslandica]
Length = 762
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 511 IVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVFPRWGSRVVPLYV-TRNPQ----- 564
I P +IP N LAD SR DW L P++ +++ WG+ V + ++N Q
Sbjct: 280 IEPEWIPRAENELADYFSRLIDYDDWSLNPAMFQTLNNLWGAYTVDRFASSQNSQLLRFN 339
Query: 565 ----DSKAAFIDAFSRKWDFKLAWVFPPPPLL 592
D+ +D F+ W + W+ PP L+
Sbjct: 340 SRFWDAATEAVDTFTVNWKGENNWLCPPVYLI 371
>gi|294864370|gb|ADF46054.1| reverse transcriptase [Eleocharis mamillata]
Length = 143
Score = 43.5 bits (101), Expect = 0.53, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L + YL+ +DL Y I +A + F
Sbjct: 5 DYRELNKDTVKNKFPIPIIDDLLDELHEAQYLSKLDLRAGYHQIKMADEDKIKTTFRTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ + FGL +AP F L N++ + V LV+ DD L+ S D N + Q
Sbjct: 65 GHYEFNVMPFGLTNAPATFQCLMNYIFKPFLRKFV--LVFFDDILVYSSDLTSHLNHLRQ 122
Query: 441 TLPV 444
L V
Sbjct: 123 VLEV 126
>gi|382948090|gb|AFG33160.1| DNA polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGXXVYYFRKAPMGVGLSPFXLHXFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 271
Query: 761 DTDLLQV 767
D +++
Sbjct: 272 DEHFMKI 278
>gi|34015323|gb|AAQ56513.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 327
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I + F +
Sbjct: 55 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIQKTAFTTRY 114
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 115 GLYEFTVMSFGLTNAPAIFMNLMNKVFMEYVDKFV--VVFIDDILVYSQ 161
>gi|301616132|ref|XP_002937520.1| PREDICTED: uncharacterized protein K02A2.6-like [Xenopus (Silurana)
tropicalis]
Length = 1357
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 63/289 (21%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQV 767
Y DD LL +L +++ + L G ++ +K +I ++ V++LG + D +
Sbjct: 591 YFDDVLLMGPSESILADRLREVLSRFDSSGIRLKKEKCEI-GANSVNFLG--YRIDASGI 647
Query: 768 RLPVDKIPPLRD------RLQTQALIELKWFYHNL-----TGFTPLH------------P 804
R K+ + D + + QA + L FYH+ T PLH P
Sbjct: 648 RPTESKVKAIHDAPEPKSKQELQAFLGLLNFYHSFLAHKATVAEPLHRLLDKGVPWNWTP 707
Query: 805 PVPRTF-----------------------MSTDASDVGWGAMVGNVSVQG---------- 831
F ++TDAS G GA++ ++ G
Sbjct: 708 KHSEAFCKVKQLLTSDSLLVHCDEDRPLILTTDASPYGVGAVLSHILPNGKEAPVAYYSR 767
Query: 832 VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALL 891
T A+R++ KE + A + + + HT + +D+K ++ + K + +
Sbjct: 768 TMTSAERNYAQIDKEALAIIAGVKKFHNYLYGHTFEIHTDHKPLLGLLSKDSPT-PNVMS 826
Query: 892 AETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQAL-IPDWHLLPSL 939
+ +++S + ++ + PGK ADALSR L IPD L P L
Sbjct: 827 PRMLRWSIMLSAYDYTLL--YKPGKSILNADALSRLPLQIPDCSLPPLL 873
>gi|48926660|gb|AAT47449.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1943
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 908 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 967
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ ++ + Q
Sbjct: 968 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQSEEDHQHHLRQ 1025
Query: 441 TL 442
L
Sbjct: 1026 VL 1027
>gi|432913222|ref|XP_004078966.1| PREDICTED: uncharacterized protein LOC101154980 [Oryzias latipes]
Length = 1292
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + + T+D S Y + +A R F +YQ + GL ++P F ++
Sbjct: 909 LAGSSWFTTLDFSNGYWQVEVAEEDREKTAFTTGRGLYQWRAMPMGLTNSPATFQRMMEL 968
Query: 406 VAVLLRERGVR---CLVYLDDFLLASQ 429
V RG+ C+VYLDD L+ S+
Sbjct: 969 VL-----RGLPWHICMVYLDDILIYSR 990
>gi|425856953|gb|AFX98099.1| pol protein [Simian foamy virus]
Length = 1143
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------ 761
Y+DD ++ DP+ Q+ + LL G+ V+LKKS+I H V++LG +
Sbjct: 312 YVDDIYISHDDPVEHVQQLEKVFSLLLNAGYVVSLKKSEIA-KHEVEFLGFNITKEGRGL 370
Query: 762 TDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGW 820
TD + +L I P +D Q Q+++ L F N + F+ L P+ S + + W
Sbjct: 371 TDTFKQKL--LNITPPKDLKQLQSILGLLNFARNFIANFSELVRPLYNIVSSANGKYITW 428
>gi|301611270|ref|XP_002935168.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1225
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 57 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 104
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 564 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 623
Query: 105 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 162
++A L+ A+H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 624 KSAFQEWRHLLEWASHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 677
Query: 163 VPYFIPGKCNSLADALSRQALIPD 186
F PG N ADALSR P+
Sbjct: 678 T--FRPGSKNGKADALSRLFSAPE 699
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 22/144 (15%)
Query: 803 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 850
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 564 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 623
Query: 851 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
++A L+ A+H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 624 KSAFQEWRHLLEWASHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 677
Query: 909 VPYFIPGKCNSLADALSRQALIPD 932
F PG N ADALSR P+
Sbjct: 678 T--FRPGSKNGKADALSRLFSAPE 699
>gi|34015336|gb|AAQ56525.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 277
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I + F +
Sbjct: 146 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIQKTAFTTRY 205
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 206 GLYEFTVMSFGLTNAPAIFMNLMNKVFMEYVDKFV--VVFIDDILVYSQSE 254
>gi|311036256|gb|ADP55744.1| polymerase [Duck hepatitis B virus]
Length = 787
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DQKYMKI 571
>gi|50878380|gb|AAT85155.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1270
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L+ + L+ + IDL Y + I F +
Sbjct: 681 DYRALNEVTIKNKYPLLQIDDLFNQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 740
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 741 GLYEFTMMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQ 787
>gi|4826599|gb|AAD30194.1|AF113831_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1675
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1241 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFT 1300
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1301 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASNNE 1350
>gi|147833383|emb|CAN66235.1| hypothetical protein VITISV_023373 [Vitis vinifera]
Length = 1968
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + ++ + N + + L K+ + D+ + I IA + R F+
Sbjct: 420 LVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAEKDRYKTAFV 479
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL +AP F + N + + +VY+DD L+ S DSV
Sbjct: 480 VPFGHYEWNVMPFGLKNAPSEFQNIMNEI---FNQFSDFIIVYIDDVLIYS-DSV 530
>gi|9630633|ref|NP_056762.1| hypothetical protein [Rice tungro bacilliform virus]
gi|130653|sp|P27502.1|POL_RTBVP RecName: Full=Polyprotein P3; AltName: Full=P194 protein; Contains:
RecName: Full=Putative movement protein; Short=MP;
Contains: RecName: Full=Capsid protein; AltName:
Full=Coat protein; Short=CP; Contains: RecName:
Full=Protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase/Ribonuclease H; Short=RT; AltName:
Full=p55; Flags: Precursor
gi|61913|emb|CAA40997.1| ORF P194 [Rice tungro bacilliform virus]
Length = 1675
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1241 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFT 1300
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1301 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASNNE 1350
>gi|147833382|emb|CAN66234.1| hypothetical protein VITISV_023372 [Vitis vinifera]
Length = 1401
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + ++ + N + + L K+ + D+ + I IA + R F+
Sbjct: 834 LVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAEKDRYKTAFV 893
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL +AP F + N + + +VY+DD L+ S DSV
Sbjct: 894 VPFGHYEWNVMPFGLKNAPSEFQNIMNEI---FNQFSDFIIVYIDDVLIYS-DSV 944
>gi|1237205|emb|CAA51084.1| unnamed protein product [Drosophila subobscura]
gi|1588533|prf||2208454B ORF 2
Length = 1009
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
N ++ + + LN ++ + + I L K Y T+DL Y I +A R
Sbjct: 207 GNPKKRLVIDFRKLNEKTIPDRYPMPSIPMILASLGKAKYFTTLDLKSGYHQIYLAEHDR 266
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQD 430
F Y+ L FGL +A F + + +LRE G C VY+DD ++ S++
Sbjct: 267 EKTSFSVSSGKYEFCRLPFGLRNASSIFQR---AIDDILREHIGKICFVYVDDVIIFSKN 323
Query: 431 S 431
Sbjct: 324 E 324
>gi|315041357|ref|XP_003170055.1| hypothetical protein MGYG_09147 [Arthroderma gypseum CBS 118893]
gi|311345089|gb|EFR04292.1| hypothetical protein MGYG_09147 [Arthroderma gypseum CBS 118893]
Length = 1590
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
A+ L + + LN + L ++ L + +DL +AY + I
Sbjct: 601 ADGSLRTCVDYRGLNKMTIKNRLTLPRVDEMLDRLAGAMFFTKLDLREAYHRVRIKEGDE 660
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F + Y+ + FGLA+AP F N V L + + C+VYLDD L+ S
Sbjct: 661 WKTAFRTRYGHYEYLVMPFGLANAPATFQGYINRVLTGLVD--IACIVYLDDILIFS 715
>gi|40786577|gb|AAR89852.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711716|gb|ABF99511.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 504 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRIADIP 563
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V V ++ V +V++DD L+ S+D
Sbjct: 564 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFVDYLDKFV--VVFIDDILIYSKDE 620
>gi|432848414|ref|XP_004066333.1| PREDICTED: uncharacterized protein LOC101167598 [Oryzias latipes]
Length = 1610
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 9/157 (5%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LN F L ++ L + +T+DL+ Y + + R R
Sbjct: 313 DGSLRMCVDYRQLNRKTRKDDFPLPRIEESLDALCGAKWFSTLDLASGYNQVSVNERDRP 372
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER---GVRC---LVYLDDFLLASQDPI 720
F P + F + G+C +RL ER C L+YLDD ++ S
Sbjct: 373 KTAFCTPFGLFEF--NRMPFGLCNAPATFQRLMERMFGAEHCQSLLLYLDDIIVFSSSVE 430
Query: 721 VLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
N++ + L L G +V L+K V+YLG
Sbjct: 431 DHLNRLDRVLSRLHREGLKVKLEKCCFF-RKEVNYLG 466
>gi|62701703|gb|AAX92776.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550523|gb|ABA93320.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1429
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 324 SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVY 383
+LN K+ L + L+ + IDL Y H+ I F + +Y
Sbjct: 596 ALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHHLRIREEDIPKTAFTTRYGLY 655
Query: 384 QRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 656 EFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQ 699
>gi|189242090|ref|XP_001807843.1| PREDICTED: similar to putative gag-pol protein [Tribolium
castaneum]
Length = 1317
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS ++ + + Q LQ +TIDL +AY I +A
Sbjct: 518 DYRKLNSITVPDRYPIPHVQDFAYKLQGKKVFSTIDLVRAYQQIAVADEDIPKTAVCTPF 577
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLK---NQ 437
+++ T + FGL +A Q F + N V L C Y+DD L+AS+ K +
Sbjct: 578 GLFEFTVMCFGLRNAAQTFQRHVNAVLGDLD----FCHAYIDDILIASESPEEHKQHLKE 633
Query: 438 IFQTL 442
+F+ L
Sbjct: 634 VFERL 638
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 15/158 (9%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R + + LNS ++ + + Q LQ +TIDL +AY I +A
Sbjct: 511 GQWRACGDYRKLNSITVPDRYPIPHVQDFAYKLQGKKVFSTIDLVRAYQQIAVADEDIPK 570
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR--------CLVYLDDFLLASQDP 719
P + F +C ++ + +R V C Y+DD L+AS+ P
Sbjct: 571 TAVCTPFGLFEFT------VMCFGLRNAAQTFQRHVNAVLGDLDFCHAYIDDILIASESP 624
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
K + + + L VN K + V+YLG
Sbjct: 625 EEHKQHLKEVFERLRQHNLVVNPAKC-VFGVEEVEYLG 661
>gi|125820708|ref|XP_686350.2| PREDICTED: hypothetical protein LOC558087 [Danio rerio]
Length = 1276
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQK---NDYLATIDLSQAYCHIPIARR 369
+ L I + + LNS KF +I L++ ++ T+DL + Y +P+
Sbjct: 893 DGSLRICVDFRKLNS---QSKFDAYPMPRIDDLLERIGQARFITTLDLCKGYWQVPLHHS 949
Query: 370 HRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+ F +YQ T L FGL AP F +L + V E YLDD ++ S
Sbjct: 950 SKALTAFRTPVGLYQFTVLPFGLHGAPATFQRLMDQVLQGCEEYAA---AYLDDVVIYS 1005
>gi|77554814|gb|ABA97610.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1030
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 285 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRLGYHQLKIRTGDIP 344
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + E+ V +V++DD L+ S+D
Sbjct: 345 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLEKFV--VVFIDDILIYSKDE 401
>gi|45775514|gb|AAS77351.1| polyprotein [Duck hepatitis B virus]
Length = 788
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNDIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DEKYMKI 572
>gi|116192815|ref|XP_001222220.1| hypothetical protein CHGG_06125 [Chaetomium globosum CBS 148.51]
gi|88182038|gb|EAQ89506.1| hypothetical protein CHGG_06125 [Chaetomium globosum CBS 148.51]
Length = 1241
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G+ I + + LN+ ++ L ++ L + +D+ A+ + +A+ H
Sbjct: 310 GIRICQDYRGLNAVTIKNRYPLPLIRETLDSLCNAKFYTKLDVIAAFNRVRVAQGHEWMT 369
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
F+ + +Y+ FGL +AP F N++ LL + V C YLDD L+ S+
Sbjct: 370 AFITRFGLYESLVTPFGLCNAPATF---QNYINHLLHDALDVYCTAYLDDVLVYSR 422
>gi|449671644|ref|XP_004207535.1| PREDICTED: uncharacterized protein LOC101241431 [Hydra
magnipapillata]
Length = 466
Score = 43.5 bits (101), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 324 SLNSYV--TTKKFKLINH-QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
LN+YV +T+ +IN + + KN + +DL +AY I + +RH + +YK
Sbjct: 19 ELNTYVKASTRDADVINDAMREWRLMSKNSNDSVVDLRRAYLQIHVHKRHWPYQTVIYKN 78
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWV-----AVLLRERGVRCLVYLDDFL 425
Y T L FGL+ AP + + +V A+ RG Y+DD L
Sbjct: 79 QRYALTRLGFGLSLAPVMMSSILRYVLQQDSALAKTTRG-----YIDDTL 123
>gi|427791983|gb|JAA61443.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 650
Score = 43.5 bits (101), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LN + L I L Y T+D S+ Y + + R + F
Sbjct: 298 LCVDYRRLNGVTRKDAYPLPTISSIVGNLGDARYFTTLDASKGYLQVRMGERDQFKTAFT 357
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+++ T + FGL +AP F +L + VL + C+ YLDD ++ S+
Sbjct: 358 SHRGLFEFTRMPFGLCNAPATFQRLMD--RVLGEAKWSYCMCYLDDIVIYSR 407
>gi|410928484|ref|XP_003977630.1| PREDICTED: uncharacterized protein K02A2.6-like [Takifugu rubripes]
Length = 786
Score = 43.5 bits (101), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 313 NTGLSIMFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
N G+ N K +LN + ++++L + + L + IDL+QAY + + + R
Sbjct: 37 NGGIRTCGNFKVTLNPVLAAEQYQLPLIEDLFAGLVGGKKFSKIDLNQAYLQMHVEEQSR 96
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFL 425
+ L +++ L FG+ SAP F + + + L GV+C YLDD L
Sbjct: 97 KLLTINTHKGLFRYRRLPFGITSAPALFQRAMDQILTGL--PGVQC--YLDDIL 146
>gi|301628678|ref|XP_002943476.1| PREDICTED: hypothetical protein LOC100496977 [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 43.5 bits (101), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCF-LYKGT-VYQRTCLSFGLASAPQAFAQLSNWVAVL 409
+ +DLSQAY IP+ R++L +KG VY R L FG+ SAP F + V
Sbjct: 431 FSKLDLSQAYLQIPVHENSRKYLTITTHKGMFVYNR--LPFGITSAPSIFQRAMEQVLQG 488
Query: 410 LRERGVRCLVYLDDFLLASQD 430
L V C +LDD L+ +D
Sbjct: 489 L--PSVHC--FLDDILITGRD 505
>gi|118861|sp|P17192.1|DPOL_HPBDB RecName: Full=Protein P; Includes: RecName: Full=DNA-directed DNA
polymerase; Includes: RecName: Full=RNA-directed DNA
polymerase; Includes: RecName: Full=Ribonuclease H
gi|325450|gb|AAA45754.1| P protein [Duck hepatitis B virus]
Length = 788
Score = 43.5 bits (101), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
+ Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNIWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVNDIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DQKFMKI 572
>gi|198412451|ref|XP_002120810.1| PREDICTED: similar to pol polyprotein, partial [Ciona intestinalis]
Length = 1526
Score = 43.5 bits (101), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 8/156 (5%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ R V + + LN + + + + L +DL +AY IP+ R
Sbjct: 139 DGSYRCVGDYRKLNQMTVSDSYPIPFLRDCANHLHGRTVFTKLDLERAYHQIPMDRSSIP 198
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR-----CLVYLDDFLLASQDPIV 721
P +++ S G+C + R + VR C ++DD L+AS+ P
Sbjct: 199 KTTITTPFGAFAYK--RMSFGLCNAAQSFSRFICQVVRGLEDFCFAFVDDLLVASRSPEE 256
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ Q L+ G +N KKS I+ V +LG
Sbjct: 257 HVKHLEVLFQRLSEYGLLINTKKS-ILGVAEVQFLG 291
>gi|342871285|gb|EGU73979.1| hypothetical protein FOXB_15510 [Fusarium oxysporum Fo5176]
Length = 1306
Score = 43.5 bits (101), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
GL + ++LN+ ++ L Q+ L + Y +D+ A+ I I
Sbjct: 343 GLRFCVDYRALNAITIKNRYPLPLIQETLSQLSQAKYFTKLDVVAAFNRIRIKEGQEWMT 402
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F + +++ + FGL++AP F N V +R C Y+DD L+ S D
Sbjct: 403 AFNTRYGLFESLVMPFGLSNAPATFQARINEVLRPFLDR--YCTAYIDDILIYSND 456
>gi|341882120|gb|EGT38055.1| hypothetical protein CAEBREN_28397 [Caenorhabditis brenneri]
Length = 2174
Score = 43.5 bits (101), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + + +N V L N + L +T+DL Y +P+ +
Sbjct: 960 DNSIRMCIDYRKVNKVVKYNAHPLPNIEATLQSLAGKAVFSTLDLVSGYWQLPLKESSKE 1019
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F+ Y+ L FGL ++P F A + V L+ G VY+DD L+AS++
Sbjct: 1020 ITAFVVGTEFYEWEVLPFGLVTSPALFQATMETVVGDLI---GKCAFVYVDDLLVASEN 1075
>gi|222574|dbj|BAA01607.1| 194K polypeptide [Rice tungro bacilliform virus]
gi|229052|prf||1817177A capsid protein
Length = 1675
Score = 43.5 bits (101), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1241 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFT 1300
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1301 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASNNE 1350
>gi|384486240|gb|EIE78420.1| hypothetical protein RO3G_03124 [Rhizopus delemar RA 99-880]
Length = 172
Score = 43.5 bits (101), Expect = 0.64, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 87 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 146
WT +++ IN++EL T+ A+ + + +DN T + Y K GG S L
Sbjct: 7 WTNEEKNTSINVRELKTILFALKLHTEKFREKNTQVFTDNITALKYSAKAGGTASPLLQE 66
Query: 147 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
++ ++ N+ + +PG N ADALSR
Sbjct: 67 LAIEIQEVIKTYNLTVTYSHVPGILNIKADALSR 100
Score = 43.5 bits (101), Expect = 0.64, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 833 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 892
WT +++ IN++EL T+ A+ + + +DN T + Y K GG S L
Sbjct: 7 WTNEEKNTSINVRELKTILFALKLHTEKFREKNTQVFTDNITALKYSAKAGGTASPLLQE 66
Query: 893 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
++ ++ N+ + +PG N ADALSR
Sbjct: 67 LAIEIQEVIKTYNLTVTYSHVPGILNIKADALSR 100
Score = 39.3 bits (90), Expect = 9.8, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 473 SDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR--- 529
+DN T + Y K G S L ++ ++ N+ + +PG N ADALSR
Sbjct: 44 TDNITALKYSAKAGGTASPLLQELAIEIQEVIKTYNLTVTYSHVPGILNIKADALSRIKV 103
Query: 530 -----QALIP-DW------HLLPSLTESVFPRWGSRVVPLYVTRNPQDSKAAFIDAFSRK 577
+A IP W + P +S R +++ + + D++A +DAF +
Sbjct: 104 TNPLYEAAIPKKWFQVINQKMGPLKIDSFAARHNTKLKTFWSYQADPDARA--VDAFRQV 161
Query: 578 WDFKLAWVFPP 588
W K ++FPP
Sbjct: 162 WPKKGLYLFPP 172
>gi|384486074|gb|EIE78254.1| hypothetical protein RO3G_02958 [Rhizopus delemar RA 99-880]
Length = 792
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 355 IDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERG 414
+D+ AY I IA+ F K +++ T + FGL +AP +F L N +R
Sbjct: 13 LDIRNAYHRIRIAKGDEWKTAFRTKYGLFEYTVMPFGLTNAPASFQSLINETLREFLDRF 72
Query: 415 VRCLVYLDDFLLASQDSVVLKNQI 438
V +VYLDD L+ S+++ ++ +
Sbjct: 73 V--VVYLDDILIFSEETAEHQHHV 94
>gi|270016137|gb|EFA12585.1| hypothetical protein TcasGA2_TC001824 [Tribolium castaneum]
Length = 1118
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 309 GNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIAR 368
GNL G + + LN+ ++ + + + L +TIDL +AY IP+
Sbjct: 490 GNLRPCG-----DYRRLNARTIPDRYPVPHIEDFSHALHGKKVFSTIDLVRAYHQIPVNP 544
Query: 369 RHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+ +++ T LSFGL +A Q F + V L C Y+DD L+AS
Sbjct: 545 QDVPKTAITTPFGLFEYTQLSFGLRNASQTFQRFIYEVTHELD----FCFAYIDDVLVAS 600
Query: 429 QDS 431
++S
Sbjct: 601 ENS 603
>gi|67901716|ref|XP_681114.1| hypothetical protein AN7845.2 [Aspergillus nidulans FGSC A4]
gi|40741994|gb|EAA61184.1| hypothetical protein AN7845.2 [Aspergillus nidulans FGSC A4]
gi|259484207|tpe|CBF80228.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 533
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 373
GL + ++LN+ ++ L + H+ + Q + +D+S A+ I IA+
Sbjct: 121 GLRFCVDYRALNAITKKDRYPLPLIHETLNQIGQAR-WFTKLDVSAAFHKIRIAKGQEWM 179
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
F + +++ FGLA+AP F + NW LRE YLD+F A D V+
Sbjct: 180 TAFRTRYGLFEWLVTPFGLANAPSTFQKYINWT---LRE-------YLDEFCSAYIDDVL 229
Query: 434 L 434
+
Sbjct: 230 V 230
>gi|153917328|dbj|BAF74362.1| pro-pol protein [Lentinula edodes]
Length = 1274
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + + LN Y ++ L I Q Y D+ Y +I I + H
Sbjct: 381 LCFVQDYRKLNEYTVKNRYPLPLVADIISRPQGARYFTKFDVRWGYNNIRIKKGHEWKGA 440
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F +++ + FGL ++P F L N + L G + VYLDD L+ S D
Sbjct: 441 FATTRGLFEPKVMFFGLTNSPATFQALMNAIFADLIAAG-KVAVYLDDILIFSND 494
>gi|46194168|tpg|DAA01994.1| TPA_exp: polyprotein [Danio rerio]
Length = 1119
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 322 LKSLNSYVTTKKFKLINH---QKIPL--FLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 376
S+NS + +++ L H Q I L + +N +LA +D+S A+ +P+ +
Sbjct: 702 FSSINSIIPPEEYALNYHDIDQAISLIKLVGRNAWLAKVDISSAFKVMPLHPDYWHLFGI 761
Query: 377 LYKGTVYQRTCLSFGLASAPQAFAQLSNWVA-VLLRERGVRCLVY-LDDFLLASQDS 431
++ Y L+FG S+P+ F LS + +L G+ +++ LDDFL+ S S
Sbjct: 762 NWRSKFYFAVRLTFGCRSSPKIFDMLSEAICWILSNNYGIAHILHLLDDFLIISPPS 818
>gi|116206144|ref|XP_001228881.1| hypothetical protein CHGG_02365 [Chaetomium globosum CBS 148.51]
gi|116207572|ref|XP_001229595.1| hypothetical protein CHGG_03079 [Chaetomium globosum CBS 148.51]
gi|88182962|gb|EAQ90430.1| hypothetical protein CHGG_02365 [Chaetomium globosum CBS 148.51]
gi|88183676|gb|EAQ91144.1| hypothetical protein CHGG_03079 [Chaetomium globosum CBS 148.51]
Length = 1385
Score = 43.5 bits (101), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G+ I + + LN+ ++ L ++ L + +D+ A+ + +A+ H
Sbjct: 386 GIRICQDYRGLNAVTIKNRYPLPLIRETLDSLCNAKFYTKLDVIAAFNRVRVAQGHEWMT 445
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
F+ + +Y+ FGL +AP F N++ LL + V C YLDD L+ S+
Sbjct: 446 AFITRFGLYESLVTPFGLCNAPATF---QNYINHLLHDALDVYCTAYLDDVLVYSR 498
>gi|388854837|emb|CCF51518.1| uncharacterized protein [Ustilago hordei]
Length = 536
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 344 LFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLS 403
L+K +DL AY + IA + F + +Y+ + FGL +AP F L
Sbjct: 294 FLLRKAKIYTKLDLKAAYNLVRIAEGNEWKTAFGTQLGLYEYLVMPFGLVNAPAHFQSLI 353
Query: 404 NWVAVLLRERGVRCLVYLDDFLLASQDS 431
N + + GV +VYLDDFL+ S +
Sbjct: 354 NQIYCDI--IGVYMVVYLDDFLIFSNNE 379
>gi|294936785|ref|XP_002781869.1| hypothetical protein Pmar_PMAR013086 [Perkinsus marinus ATCC 50983]
gi|239892945|gb|EER13664.1| hypothetical protein Pmar_PMAR013086 [Perkinsus marinus ATCC 50983]
Length = 366
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 85 GVW--TQAQRSWHINLKELFTVRAAISSNPSLVANH--------TVVLQSDNKTVIAYIR 134
G+W T+AQRSWHIN KEL + + ++ NH ++ + +D++T + ++
Sbjct: 232 GIWLSTKAQRSWHINRKELAAIGKLMLYLHEMLCNHRTIGPPISSIFVYADSRTALRWME 291
Query: 135 KQGGLRSHALLAETKKLLLIMSKL-------NIHIVPYFIPGKCNSLADALSRQALIPDW 187
+ G +S +A ++L+ +++L I + + G N AD LSR L+ W
Sbjct: 292 NRVGAKSIEKVA-VQRLVCCINELVSDIRARGITVTYGKVEGALNP-ADRLSR--LVEKW 347
Query: 188 HLLPSL 193
L SL
Sbjct: 348 GLTASL 353
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 831 GVW--TQAQRSWHINLKELFTVRAAISSNPSLVANH--------TVVLQSDNKTVIAYIR 880
G+W T+AQRSWHIN KEL + + ++ NH ++ + +D++T + ++
Sbjct: 232 GIWLSTKAQRSWHINRKELAAIGKLMLYLHEMLCNHRTIGPPISSIFVYADSRTALRWME 291
Query: 881 KQGGLRSHALLAETKKLLLIMSKL-------NIHIVPYFIPGKCNSLADALSRQALIPDW 933
+ G +S +A ++L+ +++L I + + G N AD LSR L+ W
Sbjct: 292 NRVGAKSIEKVA-VQRLVCCINELVSDIRARGITVTYGKVEGALNP-ADRLSR--LVEKW 347
Query: 934 HLLPSL 939
L SL
Sbjct: 348 GLTASL 353
>gi|4826594|gb|AAD30190.1|AF113830_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1243 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFT 1302
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1303 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FTLLYIDDILIASNNE 1352
>gi|4530353|gb|AAD22000.1| DNA-directed DNA polymerase [Snow goose hepatitis B virus]
Length = 787
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DHHYMKI 571
>gi|38346970|emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]
Length = 1606
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 522 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIP 581
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 582 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 638
>gi|37549281|gb|AAQ93079.1| P protein [Duck hepatitis B virus]
Length = 788
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNSRHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DQKYMKI 572
>gi|116221964|ref|XP_001230262.1| hypothetical protein CHGG_11115 [Chaetomium globosum CBS 148.51]
gi|88175383|gb|EAQ82860.1| hypothetical protein CHGG_11115 [Chaetomium globosum CBS 148.51]
Length = 1778
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G+ I + + LN+ ++ L ++ L + +D+ A+ + +A+ H
Sbjct: 931 GIRICQDYRGLNAVTIKNRYPLPLIRETLDSLCNAKFYTKLDVIAAFNRVRVAQGHEWMT 990
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
F+ + +Y+ FGL +AP F N++ LL + V C YLDD L+ S+
Sbjct: 991 AFITRFGLYESLVTPFGLCNAPATF---QNYINHLLHDALDVYCTAYLDDVLVYSR 1043
>gi|384493731|gb|EIE84222.1| hypothetical protein RO3G_08932 [Rhizopus delemar RA 99-880]
Length = 244
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+G RPVFNLK LN+Y+ FK+ Q++ ++ ++ L + LS + HIP+ + R
Sbjct: 186 NGGSRPVFNLKKLNNYIQAPHFKMETLQEVTKQIKHSNDLTSTYLSDDFLHIPVHPKTR 244
>gi|326665462|ref|XP_003198047.1| PREDICTED: hypothetical protein LOC100332320 [Danio rerio]
Length = 1188
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQK---NDYLATIDLSQAYCHIPIARR 369
+ L I + + LNS KF +I L++ ++ T+DL + Y +P+
Sbjct: 842 DGSLRICVDFRKLNS---QSKFDAYPMPRIDDLLERIGQARFITTLDLCKGYWQVPLHHS 898
Query: 370 HRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+ F +YQ T L FGL AP F +L + V E YLDD ++ S
Sbjct: 899 SKALTAFRTPVGLYQFTVLPFGLHGAPATFQRLMDQVLQGCEEYAA---AYLDDVVIYS 954
>gi|301604684|ref|XP_002931985.1| PREDICTED: hypothetical protein LOC100491034 [Xenopus (Silurana)
tropicalis]
Length = 1108
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 67 TDAS-DVGWGAMVGNV-SVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 121
TDA+ +G+GA G +G W Q + ++ L ELF + AI + VV
Sbjct: 960 TDAAGSLGFGAFFGGRWCAEGWPEEWVQEGLTRNLTLLELFPIIVAIELWGRQFTDRKVV 1019
Query: 122 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+DN +V+ I Q S +LA + L+L + NI +PG N +AD+LSR
Sbjct: 1020 FNTDNMSVVMAINNQTS-SSGPVLALLRHLVLRCLQFNICFQAQHLPGITNDIADSLSR 1077
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 813 TDAS-DVGWGAMVGNV-SVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVV 867
TDA+ +G+GA G +G W Q + ++ L ELF + AI + VV
Sbjct: 960 TDAAGSLGFGAFFGGRWCAEGWPEEWVQEGLTRNLTLLELFPIIVAIELWGRQFTDRKVV 1019
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+DN +V+ I Q S +LA + L+L + NI +PG N +AD+LSR
Sbjct: 1020 FNTDNMSVVMAINNQTS-SSGPVLALLRHLVLRCLQFNICFQAQHLPGITNDIADSLSR 1077
>gi|124263923|gb|ABM97613.1| truncated reverse transcriptase [Dahlia mosaic virus]
Length = 244
Score = 43.1 bits (100), Expect = 0.68, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G R V N K LN L N Q++ L+ ++ D + + + + ++
Sbjct: 70 GKKRMVVNYKKLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKL 129
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRE--RGVR--CLVYLDDFLLASQDPIVLK 723
F P +R P+I R ++ RG+ CLVY+DD ++ S
Sbjct: 130 TAFTCPQGHFQWRVVPFGLKQAPSI-FQRHMQNALRGLEEFCLVYVDDIIVFSDKEEEHY 188
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD 761
+L+ L+ + LG + L K ++I +++LG+ D
Sbjct: 189 IHVLKVLKRIESLG--IILSKKRLISLREINFLGLEID 224
>gi|294864331|gb|ADF46043.1| reverse transcriptase [Eleocharis macrostachya]
Length = 143
Score = 43.1 bits (100), Expect = 0.68, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVMDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|189242367|ref|XP_001807263.1| PREDICTED: similar to gag-pol polyprotein [Tribolium castaneum]
Length = 1200
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 309 GNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIAR 368
GNL G + + LN+ ++ + + + L +TIDL +AY IP+
Sbjct: 456 GNLRPCG-----DYRRLNARTIPDRYPVPHIEDFSHALHGKKVFSTIDLVRAYHQIPVNP 510
Query: 369 RHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+ +++ T LSFGL +A Q F + V L C Y+DD L+AS
Sbjct: 511 QDVPKTAITTPFGLFEYTQLSFGLRNASQTFQRFIYEVTHELD----FCFAYIDDVLVAS 566
Query: 429 QDS 431
++S
Sbjct: 567 ENS 569
>gi|4826604|gb|AAD30198.1|AF113832_3 polyprotein P194 [Rice tungro bacilliform virus]
Length = 1677
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1243 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKDDFKDWTTFT 1302
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1303 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FTLLYIDDILIASNNE 1352
>gi|83766359|dbj|BAE56502.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 975
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 57 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 106
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 283 HDPAKQTIIETDASDYAIGARMVQAGPDGKLRPIAFESRKLVQAELNYDIHDKELLAIVS 342
Query: 107 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 164
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 343 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 395
Query: 165 YFIPGKCNSLADALSRQ 181
G N ADALSR+
Sbjct: 396 -HCKGSENGQADALSRR 411
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 803 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 852
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 283 HDPAKQTIIETDASDYAIGARMVQAGPDGKLRPIAFESRKLVQAELNYDIHDKELLAIVS 342
Query: 853 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 910
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 343 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 395
Query: 911 YFIPGKCNSLADALSRQ 927
G N ADALSR+
Sbjct: 396 -HCKGSENGQADALSRR 411
>gi|4530348|gb|AAD21995.1| DNA-directed DNA polymerase [Snow goose hepatitis B virus]
Length = 787
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DHHYMKI 571
>gi|20152590|emb|CAD29542.1| pol [Kazachstania exigua]
Length = 1181
Score = 43.1 bits (100), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF L + + L + +DL Y + IA + F
Sbjct: 291 DYRGLNDITIKSKFPLPLIEDVLDQLSGATIFSKLDLISGYHQVAIADEDQYKTAFTTHR 350
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFLLASQDS 431
Y + FGL +AP F +L N+V LR+ + C+VYLDD L+ S++
Sbjct: 351 GQYSWRVMPFGLTNAPATFQRLMNYV---LRDYINKICVVYLDDILIYSKNE 399
>gi|427780157|gb|JAA55530.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1206
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LN + L I L Y T+D S+ Y + + R + F
Sbjct: 266 LCVDYRRLNGVTRKDAYPLPTISSIVGNLGDARYFTTLDASKGYLQVRMGERDQFKTAFT 325
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+++ T + FGL +AP F +L + VL + C+ YLDD ++ S+
Sbjct: 326 SHRGLFEFTRMPFGLCNAPATFQRLMD--RVLGEAKWSYCMCYLDDIVIYSR 375
>gi|4530338|gb|AAD21985.1| DNA-directed DNA polymerase [Snow goose hepatitis B virus]
Length = 787
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DHHYMKI 571
>gi|326677050|ref|XP_003200740.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1402
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ GL + + LN+ ++ L L+ Y +DL AY I I + H
Sbjct: 501 DGGLRPCIDYRGLNAITVKYRYPLPLVPAALELLRTAKYFTKLDLRSAYNLIRIKKNHEW 560
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F Y+ + FGLA++P F N V + R V +VY+DD L+ S+
Sbjct: 561 KTAFSTSSGHYEYLVMPFGLANSPFVFQAFINDVFRDMLNRWV--IVYIDDILIYSE 615
>gi|15150397|gb|AAK85436.1|AF404406_1 polyprotein [Duck hepatitis B virus]
Length = 787
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVTEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DQKFMKI 571
>gi|270014461|gb|EFA10909.1| hypothetical protein TcasGA2_TC001735 [Tribolium castaneum]
Length = 1515
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 136/391 (34%), Gaps = 88/391 (22%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+GT+R + LN+ + L + K + T+DL Y I + R
Sbjct: 635 ANGTIRLCVDYHKLNAVTKPDVYPLPRLDDLLHATGKIGCITTLDLQAGYWQIQVEPGDR 694
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER------GVRCLVYLDDFLLASQDP 719
F+ P + +R + G+ +RL ++ V L YLDD ++ S D
Sbjct: 695 DKTSFICPFGL--YRFTRMPFGLRNAPASFQRLMDKFKTGIPDVPILAYLDDLIIISPDG 752
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPS------HRVDYLGISWDTDLLQVRLPVDK 773
+ T L ++N K I S HR+ GI+ D ++ + +
Sbjct: 753 HTHIRHLRSTFDQLRRFQLRINRNKCLIGCSEVRYLGHRISPSGIAPDEKKVEA---IKQ 809
Query: 774 IPPLRDRLQTQALIE-LKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV 832
IPP R+ Q Q+ ++ WF + F V R + W
Sbjct: 810 IPPPRNLKQLQSFLQTCSWFRRFIDQFA----SVARPLSELTKKNASWK----------- 854
Query: 833 WTQAQRSWHINLKELFT----VRAAISSNP-------SLVANHTVVLQS---DNKTV--- 875
W AQ LKE T +RAA + P S A +LQ D + V
Sbjct: 855 WGNAQDEAFTTLKEKLTTAPILRAADPTQPFILRTDSSAYALGAALLQGEGPDERPVEYA 914
Query: 876 ------------------------IAYIRKQGGLRSHALLAETKKLLLIMS--------- 902
I+ R G S ++ + + L +MS
Sbjct: 915 SRLLTSSERNYSTTEREALAIVWAISKFRGYVGENSTTVITDHQALRWLMSLKTPTGRLA 974
Query: 903 KLNIHIVPY-----FIPGKCNSLADALSRQA 928
+ + + PY + PGK N++AD LSR A
Sbjct: 975 RWALQLQPYNLVIEYTPGKANTIADFLSRPA 1005
>gi|67625690|tpe|CAJ00230.1| TPA: gag-pol polyprotein [Schistosoma mansoni]
Length = 1357
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
A +DLS+AY IP+A + L +++ L FG+ +AP F Q+ + +L
Sbjct: 572 FAKLDLSEAYLQIPVADECKNLLTINTHKGLFRYNRLPFGVKTAPSIFQQVMD--TMLQD 629
Query: 412 ERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
G YLDD ++ D + L+ ++ Q L
Sbjct: 630 VPGA--AAYLDDIIIMGVDKIDLEKKLDQVL 658
>gi|154300545|ref|XP_001550688.1| hypothetical protein BC1G_11096 [Botryotinia fuckeliana B05.10]
Length = 1856
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 277 GNSPPNNGSRPQIAS----------DRSSNGLLSGNDRGHDIGNL-----ANTGLSIMFN 321
G PP N RP + D S G + + R L G+ I +
Sbjct: 850 GKEPPYNKGRPMSPAELRVVRRWLDDNLSKGFIRES-RSRSAAPLLLAAKPGGGVRICQD 908
Query: 322 LKSLNSYVTTKKFKLINHQKIPLFLQKNDYL------ATIDLSQAYCHIPIARRHRRFLC 375
+ LN+ VT K N +PL + D L +D+ A+ + IA H
Sbjct: 909 YRGLNN-VTIK-----NRYPLPLIKETLDALCHAKIYTKLDIIAAFNKLRIAEGHEWKTA 962
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F + +++ + FGL +AP +F N V L +R C YLDD L+ S++
Sbjct: 963 FTTRFGLFESLVMPFGLCNAPASFQNYINHVLFDLLDRT--CTAYLDDILIYSEN 1015
>gi|32489461|emb|CAE05815.1| OSJNBa0028M15.7 [Oryza sativa Japonica Group]
Length = 1822
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ L+ IDL Y + I F +
Sbjct: 940 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVLSKIDLRSGYHQLRIREEDIPKTAFTTRY 999
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1000 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFVDDILIYSQ 1046
>gi|401888493|gb|EJT52449.1| hypothetical protein A1Q1_03965 [Trichosporon asahii var. asahii CBS
2479]
Length = 1858
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
+ +L +DL AY H+ + L F G Y CL+FG S+P F S
Sbjct: 1131 FDADTWLWKMDLKDAYRHVVVDAADAALLGFHLDGKDYVDCCLNFGGKSSPFIFNMFSEA 1190
Query: 406 VAVLLRERGVRCLVYLDDFL 425
+A +L G+R LDDF
Sbjct: 1191 LAWILASFGLRNRHLLDDFF 1210
>gi|339257378|ref|XP_003370059.1| conserved hypothetical protein [Trichinella spiralis]
gi|316965378|gb|EFV50104.1| conserved hypothetical protein [Trichinella spiralis]
Length = 838
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 319 MFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LN+++ + + QK+ + ++ +A IDL +AY I I + + +
Sbjct: 310 VMDFRELNAHIESHTADADVCSQKLREWRRQGVNVALIDLKKAYLQIRIDKSLWPYQTVV 369
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR--CLVYLDDFLLASQDSVVLK 435
+KG Y T L FGL AP + N VL R+ VR Y+DD L+ +SVV
Sbjct: 370 FKGKRYCLTRLGFGLNVAPLVMKAVLN--CVLSRDPDVRKGTSAYIDDILV--NESVVAV 425
Query: 436 NQIFQTL 442
+++ + L
Sbjct: 426 DRVKRHL 432
>gi|18157521|dbj|BAB83836.1| LReO_3 [Oryzias latipes]
Length = 1498
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + LN+ + + + ++ + K+ ++ T+DLS+ Y + +A+ +
Sbjct: 1126 DGSLRFCIDFRYLNAVSKIQSYPMPRIDELLERVGKSKFITTLDLSKGYWQVALAQETKE 1185
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +Q + FGL AP F +L + + LR+ YLDD ++ S
Sbjct: 1186 LTAFTTPYGKFQFKVMPFGLQGAPATFQRLMDEI---LRDFPQFAAAYLDDVIIFS 1238
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG++R + + LN+ + + + ++ + K+ ++ T+DLS+ Y + +A+ +
Sbjct: 1126 DGSLRFCIDFRYLNAVSKIQSYPMPRIDELLERVGKSKFITTLDLSKGYWQVALAQETKE 1185
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRCLVYLDDFLLASQDPIVLK 723
F P F+ G T + + LR+ YLDD ++ S
Sbjct: 1186 LTAFTTPYGKFQFKVMPFGLQGAPATFQRLMDEILRDFPQFAAAYLDDVIIFSHSWRDHM 1245
Query: 724 NQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ + L L+ G +N K ++ +V+YLG
Sbjct: 1246 SHLRHVLHLIKAAGLTINPGKC-VVAQQQVEYLG 1278
>gi|4539665|gb|AAD22158.1|AF061282_11 polyprotein [Sorghum bicolor]
Length = 924
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + ++LN+ K+ L + L+ + + IDL Y + I
Sbjct: 40 DGSMRMCIDYRNLNAVTVKNKYPLPRIDDLLDQLKDAKFFSKIDLRSGYHQMKIRSEDVP 99
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F+ + Y+ T +SFGL +AP F + N V + E +V++DD L+ S
Sbjct: 100 KTAFVTRYGQYEFTVVSFGLTNAPAYFMNMMN--KVFMEELDKFVVVFIDDILVYS 153
>gi|4530343|gb|AAD21990.1| DNA-directed DNA polymerase [Snow goose hepatitis B virus]
Length = 787
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DHHYMKI 571
>gi|49247994|ref|YP_031695.1| DNA-directed DNA polymerase [Snow goose hepatitis B virus]
gi|4530333|gb|AAD21980.1| DNA-directed DNA polymerase [Snow goose hepatitis B virus]
Length = 787
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DHHYMRI 571
>gi|319656526|gb|ADV58678.1| P194 [Rice tungro bacilliform virus]
Length = 1674
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + LQ+ + DL + H+ + + + F
Sbjct: 1234 IVYNYKRLNDNMVTDPFNIPHKISMINLLQRARIFSKFDLKAGFHHMKLKEDFKDWTTFT 1293
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1294 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASSNE 1343
>gi|110739791|dbj|BAF01802.1| hypothetical protein [Arabidopsis thaliana]
Length = 576
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + LN K+ L ++ L+ + IDL+ Y IPIA R
Sbjct: 414 DGSFRLCIDYRGLNQVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSDYHQIPIAEADVR 473
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ + FGL +AP AF +L N V + V ++++DD L+ S+
Sbjct: 474 KTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEFLDEFV--IIFIDDILVYSK 528
>gi|348507619|ref|XP_003441353.1| PREDICTED: hypothetical protein LOC100700717 [Oreochromis
niloticus]
Length = 825
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
++ +D+ + Y IP+ +R F+ + Q T + FGL +AP F +L N V +
Sbjct: 536 FITKLDMLKGYWQIPLTKRASEISAFVTPDSFLQYTVMPFGLCNAPATFQRLVNKVLGDV 595
Query: 411 RERGVRCLVYLDDFLLASQD 430
C VYLDD ++ S +
Sbjct: 596 ----PNCRVYLDDIVVYSSE 611
>gi|339247547|ref|XP_003375407.1| putative integrase core domain protein [Trichinella spiralis]
gi|316971287|gb|EFV55089.1| putative integrase core domain protein [Trichinella spiralis]
Length = 1155
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 319 MFNLKSLNSYVTTKKFKL-INHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LN+++ + + QK+ + ++ +A IDL +AY I I + + +
Sbjct: 378 VMDFRELNAHIESHTADADVCSQKLREWRRQGVNVALIDLKKAYLQIRIDKSLWPYQTVV 437
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR--CLVYLDDFLLASQDSVVLK 435
+KG Y T L FGL AP + N VL R+ VR Y+DD L+ +SVV
Sbjct: 438 FKGKRYCLTRLGFGLNVAPLVMKAVLN--CVLSRDPDVRKGTSAYIDDILV--NESVVAV 493
Query: 436 NQIFQTL 442
+++ + L
Sbjct: 494 DRVKRHL 500
>gi|15029035|emb|CAC41321.2| unnamed protein product [Rice tungro bacilliform virus]
Length = 1674
Score = 43.1 bits (100), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + LQ+ + DL + H+ + + + F
Sbjct: 1234 IVYNYKRLNDNMVTDPFNIPHKISMINLLQRARIFSKFDLKAGFHHMKLKEDFKDWTTFT 1293
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1294 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASSNE 1343
>gi|2146902|pir||S64734 retrovirus-related pol polyprotein homolog - fruit fly (Drosophila
subobscura) retrotransposon gypsy
Length = 1009
Score = 43.1 bits (100), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L K Y T+DL Y I +A R F Y+ L FGL +A F +
Sbjct: 241 LGKAKYFTTLDLKSGYHQIYLAEHDREKTSFSVSSGKYEFCRLPFGLRNASSIFQR---A 297
Query: 406 VAVLLRER-GVRCLVYLDDFLLASQDS 431
+ +LRE G C VY+DD ++ S++
Sbjct: 298 IDDILREHIGKICFVYVDDVIIFSKNE 324
>gi|232018|sp|P30028.1|DPOL_HPBDC RecName: Full=Protein P; Includes: RecName: Full=DNA-directed DNA
polymerase; Includes: RecName: Full=RNA-directed DNA
polymerase; Includes: RecName: Full=Ribonuclease H
gi|325437|gb|AAA45745.1| polymerase [Duck hepatitis B virus]
Length = 787
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVTEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DQKFMKI 571
>gi|189234037|ref|XP_001808080.1| PREDICTED: similar to protease, reverse transcriptase, ribonuclease
H, integrase [Tribolium castaneum]
Length = 1202
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 136/391 (34%), Gaps = 88/391 (22%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+GT+R + LN+ + L + K + T+DL Y I + R
Sbjct: 336 ANGTIRLCVDYHKLNAVTKPDVYPLPRLDDLLHATGKIGCITTLDLQAGYWQIQVEPGDR 395
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER------GVRCLVYLDDFLLASQDP 719
F+ P + +R + G+ +RL ++ V L YLDD ++ S D
Sbjct: 396 DKTSFICPFGL--YRFTRMPFGLRNAPASFQRLMDKFKTGIPDVPILAYLDDLIIISPDG 453
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPS------HRVDYLGISWDTDLLQVRLPVDK 773
+ T L ++N K I S HR+ GI+ D ++ + +
Sbjct: 454 HTHIRHLRSTFDQLRRFQLRINRNKCLIGCSEVRYLGHRISPSGIAPDEKKVEA---IKQ 510
Query: 774 IPPLRDRLQTQALIE-LKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV 832
IPP R+ Q Q+ ++ WF + F V R + W
Sbjct: 511 IPPPRNLKQLQSFLQTCSWFRRFIDQFA----SVARPLSELTKKNASWK----------- 555
Query: 833 WTQAQRSWHINLKELFT----VRAAISSNP-------SLVANHTVVLQS---DNKTV--- 875
W AQ LKE T +RAA + P S A +LQ D + V
Sbjct: 556 WGNAQDEAFTTLKEKLTTAPILRAADPTQPFILRTDSSAYALGAALLQGEGPDERPVEYA 615
Query: 876 ------------------------IAYIRKQGGLRSHALLAETKKLLLIMS--------- 902
I+ R G S ++ + + L +MS
Sbjct: 616 SRLLTSSERNYSTTEREALAIVWAISKFRGYVGENSTTVITDHQALRWLMSLKTPTGRLA 675
Query: 903 KLNIHIVPY-----FIPGKCNSLADALSRQA 928
+ + + PY + PGK N++AD LSR A
Sbjct: 676 RWALQLQPYNLVIEYTPGKANTIADFLSRPA 706
>gi|1030731|emb|CAA32198.1| polyprotein [Drosophila melanogaster]
Length = 1053
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 19/233 (8%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
+GT R + + LNS + K+ L L+ +Y +D++ + IPI
Sbjct: 504 NGTDRLCVDFRELNSNTISDKYPLPLISDQIARLRGANYFTCLDMASGFHQIPIHPESVE 563
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQI 726
+ F +P + + +P V + +VY+DD ++ S + ++
Sbjct: 564 YTAF-VPDGLKN------APSVFQRTVINALGDLANSFVIVYMDDIMVVSPTKELALERL 616
Query: 727 LQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKI------PPLRDR 780
L +LT G+ NL K + + V YLG ++ ++R V KI PP +
Sbjct: 617 KTVLNVLTKAGFTFNLAKCSFLKT-TVQYLG--YEVRAGEIRPNVRKIASLSSLPPPQTV 673
Query: 781 LQTQALIEL-KWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGV 832
+ I L +F ++GF+ L P+ +S+ + + W A + + ++ V
Sbjct: 674 SGVRQFIGLASYFRKFVSGFSQLMKPL--YSLSSGSGKITWSAELEEIRLKVV 724
>gi|406866665|gb|EKD19704.1| hypothetical protein MBM_01656 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1612
Score = 43.1 bits (100), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 355 IDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERG 414
ID+ QA+ I I+ + F + + Y+ L FGL + P F + N +L+
Sbjct: 932 IDIQQAFHRIRISSESKELTTFRTRYSTYKYKVLPFGLTNRPATFQRFIN--DILMEHLD 989
Query: 415 VRCLVYLDDFLLASQDSV 432
C YLDD L+ S + +
Sbjct: 990 DFCSAYLDDILIYSTNEL 1007
>gi|427798111|gb|JAA64507.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1010
Score = 43.1 bits (100), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN+ + L + L Y +++DL Y IP+ + F+
Sbjct: 211 DYRRLNALTKKDVYPLPRIDDVIDCLHSASYFSSVDLRSGYWQIPMHPADKEKTAFVTPD 270
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR---CLVYLDDFLL 426
+YQ + FGL +AP F + + + RG++ CL YLDD ++
Sbjct: 271 GLYQFNVMPFGLCNAPAIFERFMDSIL-----RGLKWEVCLCYLDDVVI 314
>gi|40786826|gb|AAR89920.1| polymerase protein [Ross's goose hepatitis B virus]
Length = 786
Score = 43.1 bits (100), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAISDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGVRINFDKTTPSPVTEIKFLGYLI 563
Query: 761 DTDLLQV 767
D +++
Sbjct: 564 DDKFMKI 570
>gi|327278749|ref|XP_003224123.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Anolis carolinensis]
Length = 995
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARR---HR 371
GL ++ + + LN+ TT ++ L ++ L + +DL +A+ I I
Sbjct: 148 GLRLVVDYRGLNAISTTNQYPLPLMSEMLAQLGEARIFTKLDLREAFYRIRIKDEDCWKT 207
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ-- 429
F C L + Y L FGL P+ F Q N + +GV ++YLDD LL S+
Sbjct: 208 AFNCHLGQ---YHFKVLPFGLCGGPKVFMQFINETFRDMLYKGV--IIYLDDILLYSKSL 262
Query: 430 -DSVVLKNQIFQTLPVN 445
+ + L ++ + L N
Sbjct: 263 SEHIRLTREVLRRLKEN 279
>gi|77554308|gb|ABA97104.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1412
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 63/158 (39%), Gaps = 11/158 (6%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT R + + LNS KF + ++ L + + +DL Y I +
Sbjct: 578 DGTWRLCIDYRQLNSITMKGKFPMPVIDELLDELSGSKVFSKLDLRAGYHQIRLVEGEEH 637
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK------LGRRLRERGVRCLVYLDDFLLASQDP 719
F +R S G T + L LR+ LV+ DD L+ S D
Sbjct: 638 KTTFQTHSGHYEYRVMSFGLTGAPATFQGAMNDTLAPVLRKFA---LVFFDDILVYSPDL 694
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ + + Q LQLLT W+V L K H++ YLG
Sbjct: 695 VSHVHHLRQVLQLLTEHQWKVKLSKCS-FAQHQLSYLG 731
>gi|115658080|ref|XP_001187117.1| PREDICTED: uncharacterized protein LOC754800 [Strongylocentrotus
purpuratus]
Length = 1200
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT R + + LN + N Q + L K+ Y + IDL++ Y IP+ +
Sbjct: 831 DGTNRFCIDFRRLNKITVFDPEPMPNQQDLFASLAKSKYFSKIDLTKGYWQIPMRESDKA 890
Query: 667 FLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQ 717
FL P+ FR L + G T ++ RR+ + + Y+DD L+ ++
Sbjct: 891 KTAFLTPVGQYQFRYMPFGLVTAGAQFT-RMMRRVLKSIPNVVNYIDDILVHTE 943
>gi|301630801|ref|XP_002944505.1| PREDICTED: hypothetical protein LOC100494531 [Xenopus (Silurana)
tropicalis]
Length = 1075
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLA---SAPQAFAQLSNWVAV 408
+A D+ A+ +P+ + + L +KG+ Y CL G + S +AF+ W V
Sbjct: 695 MAKADIESAFRLLPVHKESQHLLGCFFKGSYYVDRCLPMGCSISCSYFEAFSTFLEW--V 752
Query: 409 LLRERGVRCLV-YLDDFLLASQDSVVLKNQIFQTL 442
+ ++ GV ++ YLDDFL + L + QTL
Sbjct: 753 VRKQAGVNTVIHYLDDFLCVGPGNSGLCAVLLQTL 787
>gi|281205563|gb|EFA79753.1| hypothetical protein PPL_07444 [Polysphondylium pallidum PN500]
Length = 1918
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+ IDL Q Y I + + F V+Q T L FGL +AP F +L + +
Sbjct: 925 FSKIDLLQGYHQIRVHENDQSKTAFRTSFGVFQYTVLPFGLTNAPACFQRLMDSIF---- 980
Query: 412 ERGV---RCLVYLDDFLLASQ 429
+R V + LVYLDD L+ +
Sbjct: 981 QRHVIAKKLLVYLDDLLIKTN 1001
>gi|115816764|ref|XP_001201671.1| PREDICTED: uncharacterized protein LOC764966 [Strongylocentrotus
purpuratus]
Length = 1548
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DGT R + + LN + N Q + L K+ Y + IDL++ Y IP+ +
Sbjct: 1152 DGTNRFCIDFRRLNKITVFDPEPMPNQQDLFASLAKSKYFSKIDLTKGYWQIPMRESDKA 1211
Query: 667 FLCFLIPMDMSSFRP---SLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQ 717
FL P+ FR L + G T ++ RR+ + + Y+DD L+ ++
Sbjct: 1212 KTAFLTPVGQYQFRYMPFGLVTAGAQFT-RMMRRVLKSIPNVVNYIDDILVHTE 1264
>gi|427793721|gb|JAA62312.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1246
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y ++IDL Y I + R F+ +YQ + FGL +AP F ++ +
Sbjct: 435 LHGAQYFSSIDLRSGYWQISVDPMDREKTAFITPDGLYQFKVMPFGLCNAPATFERMMD- 493
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
++L + CL YLDD ++ S
Sbjct: 494 -SLLRGYKWSVCLCYLDDVIVYS 515
>gi|54287627|gb|AAV31371.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLF--LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLY 378
+ ++LN K+ L H+ LF L+ + IDL Y + I F
Sbjct: 938 DYRALNEVTIKNKYPL--HRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTT 995
Query: 379 KGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+ +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 996 RYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1044
>gi|189235491|ref|XP_001808582.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1445
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 670 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFV 729
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N + LR + C Y+ D L+ S+D
Sbjct: 730 TPDGHYEFVRMPFGLANAPAVFQRAMNKMLDPLRFQTAFC--YIADLLIPSKD 780
>gi|154296824|ref|XP_001548841.1| hypothetical protein BC1G_12501 [Botryotinia fuckeliana B05.10]
Length = 1821
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 30/175 (17%)
Query: 277 GNSPPNNGSRPQIAS----------DRSSNGLLSGNDRGHDIGNL-----ANTGLSIMFN 321
G PP N RP + D S G + + R L G+ I +
Sbjct: 850 GKEPPYNKGRPMSPAELRVVRRWLDDNLSKGFIRES-RSRSAAPLLLAAKPGGGVRICQD 908
Query: 322 LKSLNSYVTTKKFKLINHQKIPLFLQKNDYL------ATIDLSQAYCHIPIARRHRRFLC 375
+ LN+ VT K N +PL + D L +D+ A+ + IA H
Sbjct: 909 YRGLNN-VTIK-----NRYPLPLIKETLDALCHAKIYTKLDIIAAFNKLRIAEGHEWKTA 962
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F + +++ + FGL +AP +F N V L +R C YLDD L+ S++
Sbjct: 963 FTTRFGLFESLVMPFGLCNAPASFQNYINHVLFDLLDRT--CTAYLDDILIYSEN 1015
>gi|255726280|ref|XP_002548066.1| hypothetical protein CTRG_02363 [Candida tropicalis MYA-3404]
gi|240133990|gb|EER33545.1| hypothetical protein CTRG_02363 [Candida tropicalis MYA-3404]
Length = 1299
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLA------TIDLSQAYCHIPIARRHRRFL 374
+ ++LN ++F IPL + D L+ T+DL Y + IA+ +
Sbjct: 359 DYRALNDITVKERFP------IPLIDELFDSLSGATIFSTLDLHSGYHQVAIAKEDQEKT 412
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVL 434
F+ + Y + FGL +AP F +L N + + ++ + +YLDD ++ S+D
Sbjct: 413 AFVTRFGQYAWKVMPFGLCNAPATFQRLMNDIFMDTFDKYLN--IYLDDLIIYSRDRESH 470
Query: 435 KNQIFQTL 442
+ + + L
Sbjct: 471 EKHVREVL 478
>gi|328724040|ref|XP_001951951.2| PREDICTED: hypothetical protein LOC100164298 [Acyrthosiphon pisum]
Length = 1191
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 323 KSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTV 382
+++N + F L N ++ + ++ +TIDL AY IPI R++ F G +
Sbjct: 465 QTINKFTLMDAFPLPNIDELVSKVAQHTIYSTIDLRSAYHQIPIHEDERQYTAFEAGGRL 524
Query: 383 YQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
YQ + FG+ + F ++ + + GV YLDD + +
Sbjct: 525 YQFRKIPFGVTNGVACFQRVIDTIISQENLDGV--YAYLDDITICGNN 570
>gi|88595535|gb|ABD43074.1| reverse transcriptase [Orobanche cernua var. desertorum]
Length = 143
Score = 42.7 bits (99), Expect = 0.91, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L +I LQ + IDL Y + I + F +
Sbjct: 5 DYRELNRVTIKNKYPLPRIDEILDQLQGASVFSKIDLRSGYHQLRIRESDIARMAFRTRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ + FGL +AP F +L N V + +R V +V++DD L+ S++ + + Q
Sbjct: 65 GHYEFVVMPFGLTNAPAVFMELMNRVFINFLDRFV--VVFIDDILIYSRNREEHELHLHQ 122
Query: 441 TLPV 444
L V
Sbjct: 123 VLDV 126
>gi|62732761|gb|AAX94880.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
gi|77549451|gb|ABA92248.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1849
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I + F +
Sbjct: 967 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIRKEDIPKTAFTTRY 1026
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1027 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1073
>gi|402534616|gb|AFQ62092.1| P194 [Rice tungro bacilliform virus]
Length = 1674
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + LQ+ + DL + H+ + + + F
Sbjct: 1234 IVYNYKRLNDNMVTDPFNIPHKISMINLLQRARIFSKFDLKAGFHHMKLKEDFKDWTTFT 1293
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+Y FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1294 CSEGLYTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASSNE 1343
>gi|301605052|ref|XP_002932173.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1278
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 57 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 104
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 624 HPDPSRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 683
Query: 105 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 162
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 684 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 737
Query: 163 VPYFIPGKCNSLADALSRQALIPD 186
F PG N ADALSR P+
Sbjct: 738 T--FRPGSKNGKADALSRLFPAPE 759
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 803 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 850
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 624 HPDPSRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 683
Query: 851 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 684 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 737
Query: 909 VPYFIPGKCNSLADALSRQALIPD 932
F PG N ADALSR P+
Sbjct: 738 T--FRPGSKNGKADALSRLFPAPE 759
>gi|281211438|gb|EFA85602.1| hypothetical protein PPL_01385 [Polysphondylium pallidum PN500]
Length = 1905
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+ IDL Q Y I + + F V+Q T L FGL +AP F +L + +
Sbjct: 912 FSKIDLLQGYHQIRVHENDQSKTAFRTSFGVFQYTVLPFGLTNAPACFQRLMDSIF---- 967
Query: 412 ERGV---RCLVYLDDFLLASQ 429
+R V + LVYLDD L+ +
Sbjct: 968 QRHVIAKKLLVYLDDLLIKTN 988
>gi|294864377|gb|ADF46057.1| reverse transcriptase [Eleocharis mamillata]
Length = 143
Score = 42.7 bits (99), Expect = 0.93, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ Y + +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYFSKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL +AP F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNAPATFQCLMNFVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|38567665|emb|CAE75948.1| B1159F04.11 [Oryza sativa Japonica Group]
Length = 1679
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 896 DYRALNEVTIKNKYPLPRIDDLFDQLKGTTVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 955
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 956 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1002
>gi|315056475|ref|XP_003177612.1| hypothetical protein MGYG_08943 [Arthroderma gypseum CBS 118893]
gi|311339458|gb|EFQ98660.1| hypothetical protein MGYG_08943 [Arthroderma gypseum CBS 118893]
Length = 574
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
A+ L + + LN + L ++ L + +DL +AY + I
Sbjct: 196 ADGSLRTCVDYRGLNKMTIKNRLTLPRVDEMLDRLAGAMFFTKLDLREAYHRVRIKEGDE 255
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F + Y+ + FGLA+AP F N V L + + C+VYLDD L+ S
Sbjct: 256 WKTAFRTRYGHYEYLVMPFGLANAPATFQGYINRVLTGLVD--IACIVYLDDILIFS 310
>gi|270003428|gb|EEZ99875.1| hypothetical protein TcasGA2_TC002657 [Tribolium castaneum]
Length = 902
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 146/397 (36%), Gaps = 75/397 (18%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRF 667
G +R + K LN + + + + Q I L ID+S + H+P+ +
Sbjct: 140 GQLRLCLDPKDLNKAIKREHYMIPTAQDIIPRLAGKKIFTVIDMSAGFWHVPLDKESSDL 199
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKN--- 724
CF + F P + ++ +R ++ + D I++ N
Sbjct: 200 CCFNTHVGRYKFLRMPFGIKSAPEV-----FQKHVIRIFGHISGVSVIFDDLIIVANNEK 254
Query: 725 ---QILQTLQLLTYLGWQVNLKKSQI---IPSHR-----VDYLGISWDTD----LLQVRL 769
+ILQ + L T L + K +I I S R + GI D D + ++
Sbjct: 255 GHDEILQRV-LNTALENNIKFNKDKIQYKIKSVRYMGNIITDKGIKPDDDKVCAIREMSE 313
Query: 770 PVDK----------------IP-------PLRDRLQTQALIELKWFYHNLTGFTPLHP-- 804
P K IP PLR+ L+ +E W + + F L
Sbjct: 314 PKCKEEVKRFLGMINFLSSFIPNVAIINAPLRELLKQN--VEWHWTHRHTEVFNKLKELL 371
Query: 805 ----------PVPRTFMSTDASDVGWGA-MVGNVSVQGVWTQAQRSWHINL----KELFT 849
P + TDAS G G ++ N ++A IN KEL
Sbjct: 372 SKQPTMKYFDPKENIVIQTDASKKGIGCCLLQNGQPVAYASRALTETEINYAQIEKELLA 431
Query: 850 VRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIV 909
V + + V +Q+D+K ++A RK G + A +++LL K + H+
Sbjct: 432 VVYCLEKFHYYIYGRHVTVQTDHKPLLAITRKNIGQTT----ARLQRMLLRTLKYDFHL- 486
Query: 910 PYFIPGKCNSLADALSRQAL---IPDWHLLPSLTESV 943
FI GK LAD LSR L + D L S+ S+
Sbjct: 487 -EFIQGKHMYLADTLSRNFLKDRVKDDEDLESVVHSI 522
>gi|301632403|ref|XP_002945275.1| PREDICTED: genome polyprotein-like [Xenopus (Silurana) tropicalis]
Length = 565
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 65 MSTDAS-DVGWGAMVGNVSVQGVWTQAQRSWHIN----LKELFTVRAAISSNPSLVANHT 119
+ TDA+ G+GA + W R + L E+F V A+ S +AN
Sbjct: 415 LFTDAAGSTGFGAYLSGCWCCAAWPTEWREQELTGNLVLLEIFPVLVALEIWGSWLANRR 474
Query: 120 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 179
++L DN V+ I +S ++ + L+ + K NI + IPG N LAD+LS
Sbjct: 475 ILLFCDNMGVVQVINNLSA-KSPPVVKVMRHLVFLALKHNIWLKAKHIPGCQNILADSLS 533
Query: 180 RQAL 183
R L
Sbjct: 534 RFQL 537
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 811 MSTDAS-DVGWGAMVGNVSVQGVWTQAQRSWHIN----LKELFTVRAAISSNPSLVANHT 865
+ TDA+ G+GA + W R + L E+F V A+ S +AN
Sbjct: 415 LFTDAAGSTGFGAYLSGCWCCAAWPTEWREQELTGNLVLLEIFPVLVALEIWGSWLANRR 474
Query: 866 VVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALS 925
++L DN V+ I +S ++ + L+ + K NI + IPG N LAD+LS
Sbjct: 475 ILLFCDNMGVVQVINNLSA-KSPPVVKVMRHLVFLALKHNIWLKAKHIPGCQNILADSLS 533
Query: 926 RQAL 929
R L
Sbjct: 534 RFQL 537
>gi|301614366|ref|XP_002936672.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 995
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 57 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 104
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 542 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 601
Query: 105 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 162
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 602 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 655
Query: 163 VPYFIPGKCNSLADALSRQALIPD 186
F PG N ADALSR P+
Sbjct: 656 T--FRPGSKNGKADALSRLFPAPE 677
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 803 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 850
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 542 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 601
Query: 851 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 602 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 655
Query: 909 VPYFIPGKCNSLADALSRQALIPD 932
F PG N ADALSR P+
Sbjct: 656 T--FRPGSKNGKADALSRLFPAPE 677
>gi|242075522|ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [Sorghum bicolor]
gi|241938880|gb|EES12025.1| hypothetical protein SORBIDRAFT_06g013680 [Sorghum bicolor]
Length = 1360
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 18/185 (9%)
Query: 755 YLGISWDTDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTD 814
Y ++ D +L RL K PP TQA+ ++K L L + + TD
Sbjct: 1169 YERLAKDRKILTERLK--KNPPAWTTRHTQAVKQIKDKVKRLPCLYILDHDALK-IIETD 1225
Query: 815 ASDVGWGAMVGNVS---------VQGVWTQAQRSWHINLKELFTVRAAISSNPSLVANHT 865
ASD G+G ++ G W AQR++ KE+ + +S + N
Sbjct: 1226 ASDFGYGGILKQRKDSKEQLVWFASGTWNDAQRNYSTIKKEILAIVKIVSKFQGELLNQK 1285
Query: 866 VVLQSDNKTVIAYIRKQ-GGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
+L+ D K +++ L S + A + I+S + I I G+ NSL D L
Sbjct: 1286 FLLRIDCKAAKDVLQQDVENLVSKQIFA---RWQAILSCFDFDIE--HIKGEVNSLPDFL 1340
Query: 925 SRQAL 929
SR+ L
Sbjct: 1341 SREFL 1345
>gi|189236294|ref|XP_001815303.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1459
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LNS +F L + L + T+DL+ Y IP+A F+
Sbjct: 673 DYRQLNSKTIKDRFPLPRVDEHLDKLNGAKFFTTLDLASGYYQIPMATESIPKTAFVTPD 732
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N + LR + C Y+ D L+ S+D
Sbjct: 733 GHYEFVRMPFGLANAPAVFQRAMNKMLDPLRFQTAFC--YIADLLIPSKD 780
>gi|147797537|emb|CAN69162.1| hypothetical protein VITISV_016584 [Vitis vinifera]
Length = 4779
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + ++ + N + + L K+ + D+ + I IA + R F+
Sbjct: 49 LVINYKPLNDVLRWIRYPIPNKKDLLQRLGKSKVFSKFDMKSGFWQIQIAEKDRYKTAFV 108
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL +AP F + N + + +VY+DD L+ S DSV
Sbjct: 109 VPFGHYEWNVMPFGLKNAPSEFQNIMNEI---FNQFSDFIIVYIDDVLIYS-DSV 159
>gi|301609828|ref|XP_002934465.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1160
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 57 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 104
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 530 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 589
Query: 105 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 162
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 590 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 643
Query: 163 VPYFIPGKCNSLADALSRQALIPD 186
F PG N ADALSR P+
Sbjct: 644 T--FRPGSKNGKADALSRLFPAPE 665
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 803 HPPVPRTF-MSTDASDVGWGAMVGNVS-VQGVW----------TQAQRSWHINLKELFTV 850
HP R F + DAS+ GA++ + VQ + + +++++ + +EL +
Sbjct: 530 HPDPTRPFVLEVDASEYAIGAVLSQRNDVQSLLHPIAFFSKKLSSSEQNYDVGDRELLAI 589
Query: 851 RAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHI 908
++A L+ A H +++ SD+K + Y+R LR + L S+ N H+
Sbjct: 590 KSAFQEWRHLLEGAAHPILVFSDHKN-LEYLRSAKRLR-----PRQARWALFFSRFNFHV 643
Query: 909 VPYFIPGKCNSLADALSRQALIPD 932
F PG N ADALSR P+
Sbjct: 644 T--FRPGSKNGKADALSRLFPAPE 665
>gi|212530052|ref|XP_002145183.1| retrovirus polyprotein, putative [Talaromyces marneffei ATCC 18224]
gi|210074581|gb|EEA28668.1| retrovirus polyprotein, putative [Talaromyces marneffei ATCC 18224]
Length = 668
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G+ I + + LN ++ + Q+ L + Y +D+ A+ + IA
Sbjct: 232 GVRICVDYRGLNEITRKNRYPIPLIQETLQLLTRARYFTKLDIIAAFNKLRIAAGDEWKT 291
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVL 434
F + +++ ++FGL +AP A N++ +L+E YLDDF+ A D +++
Sbjct: 292 AFRTRFRLFESLVMNFGLTNAP---ASWQNYINDILKE-------YLDDFVCAYMDDILI 341
>gi|339256318|ref|XP_003370466.1| reverse transcriptase family protein [Trichinella spiralis]
gi|316958048|gb|EFV47262.1| reverse transcriptase family protein [Trichinella spiralis]
Length = 175
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLA------TIDLSQAYCHIPI 660
DG+ R + + LN+ L++ Q IP D LA T+DL+ Y + +
Sbjct: 26 DGSPRFCVDYRRLNAVT------LVDAQPIPRIDDTLDALAGAKWFSTLDLASGYWQVEV 79
Query: 661 ARRHRRFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR------CLVYLDDFLL 714
A + F P+ + FR + G+C +R + +R CLVYLDD ++
Sbjct: 80 AEKDLEKTAFSTPLGIFQFR--VMPFGLCNASATFQRSMVKALRGLTWKTCLVYLDDIIV 137
Query: 715 ASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQII 748
+ ++ L L +G ++ +K Q+I
Sbjct: 138 FGKTEEEHLERLEGVLSRLQSVGLKIKSEKCQLI 171
>gi|77549441|gb|ABA92238.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 475
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 327 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 386
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 387 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 433
>gi|14245691|gb|AAK56444.1| reverse transcriptase [Kazachstania exigua]
Length = 357
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF L + + L + +DL Y + IA + F
Sbjct: 159 DYRGLNDITIKSKFPLPLIEDVLDQLSGATIFSKLDLISGYHQVAIADEDQYKTAFTTHR 218
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVR-CLVYLDDFLLASQDS 431
Y + FGL +AP F +L N+V LR+ + C+VYLDD L+ S++
Sbjct: 219 GQYSWRVMPFGLTNAPATFQRLMNYV---LRDYINKICVVYLDDILIYSKNE 267
>gi|40786843|gb|AAR89934.1| polymerase protein [Duck hepatitis B virus]
Length = 787
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P L + FR + G+ P T LG + R
Sbjct: 445 SLDLSQAFYHLPFNPASSSRLAISDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 504
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + + +LG
Sbjct: 505 FNVWTFTYMDDFLLCHPNARHLNAISHSVCSFLQELGVRINFDKTTPSPVNEIRFLGYQI 564
Query: 761 DTDLLQV 767
D +++
Sbjct: 565 DQRYMKI 571
>gi|37700320|gb|AAR00610.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 843
Score = 42.7 bits (99), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
N + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 86 NGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYNQLKIRIGDIP 145
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V ++ V +V++DD L+ S+D
Sbjct: 146 KTTFSTRYGLYEFTVMSFGLTNAPVYFMNLMNKVFTDYLDKFV--VVFIDDILIYSKDE 202
>gi|374081772|dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + ++LN+ K+ L + LQ + IDL Y + I R
Sbjct: 260 DGSLRMCIDYRALNNLTIKNKYPLPRIDDLFNQLQGKKVFSKIDLRSGYHQLKIKVADRP 319
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + Y+ + FGL +AP AF L V + ++ V +V++DD L+ S+D
Sbjct: 320 KTAFSTRYGHYEFLVMPFGLTNAPSAFMDLMQRVFMPYLDKFV--VVFIDDILIYSKDE 376
>gi|3810595|gb|AAC69377.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1328
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + LN K+ L ++ L+ + IDL+ Y IPIA R
Sbjct: 513 DGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHLIPIAEADVR 572
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + ++ + FGL +AP AF +L N V + + V ++++DD L+ S+
Sbjct: 573 KTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFV--IIFIDDILVYSK 627
>gi|326678668|ref|XP_003201134.1| PREDICTED: hypothetical protein LOC100536674 [Danio rerio]
Length = 1234
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQK---NDYLATIDLSQAYCHIPIARR 369
+ L I + + LNS KF +I L++ ++ T+DL + Y +P+
Sbjct: 893 DGSLRICVDFRKLNS---QSKFDAYPMPRIDDLLERIGQARFITTLDLCKDYWQVPLHHS 949
Query: 370 HRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
+ F +YQ T L FGL AP F +L + V E YLDD ++ S
Sbjct: 950 SKALTAFRTPVGLYQFTVLPFGLHGAPATFQRLMDQVLQGCEEYAA---AYLDDVVIYS 1005
>gi|336258170|ref|XP_003343904.1| hypothetical protein SMAC_09594 [Sordaria macrospora k-hell]
Length = 585
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 312 ANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 371
N GL + LN+ ++ L + + + +D+ QA+ I + H
Sbjct: 163 GNGGLRFCVDYHKLNALSKKDRYPLPLIDETLACISQAKVFTKVDIRQAFHRIRMHPDHE 222
Query: 372 RFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
F + Y+ L FGL P +F + N VL+ C Y+DD L+ S D
Sbjct: 223 DLTTFRTRYGAYKYKVLPFGLTGGPSSFQRFIN--EVLMGYLDNFCSAYIDDILIYSND 279
>gi|326668593|ref|XP_002662411.2| PREDICTED: hypothetical protein LOC100329798 [Danio rerio]
Length = 796
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 355 IDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERG 414
IDL++ Y +P++ + F G +Q L FGL AP F ++ + +LLR
Sbjct: 494 IDLTKGYWQLPLSESAKEKTAFSTPGGHWQYRVLPFGLHGAPATFQRMMD---ILLRPHQ 550
Query: 415 VRCLVYLDDFLLASQ 429
YLDD ++ S+
Sbjct: 551 PYAAAYLDDLIVHSE 565
>gi|119657147|gb|ABL86702.1| putative pol protein [Adineta vaga]
Length = 1302
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
+ + LN+ T F + I L + Y TID Y + + R R F +
Sbjct: 433 IDYRKLNAITTKDAFPIPRIDDIFDHLSQTGYYTTIDFKSGYFQVGLDARDRPKTAFSTR 492
Query: 380 GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
YQ T L G+ + P AF ++ + +L R L YLDD ++ S
Sbjct: 493 DQHYQFTVLPQGVTNGPPAFQRIVS--QILGPTRWKYALAYLDDVIIYS 539
>gi|313230692|emb|CBY08090.1| unnamed protein product [Oikopleura dioica]
Length = 1043
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+++++DLS+AY + +A L F + G YQ + +G A+AP AF+++ +A ++
Sbjct: 357 FISSLDLSRAYWQVRVAEEDAFKLAFSHNGRHYQANRMLYGTATAPSAFSRI---MAKIM 413
Query: 411 RERGVRCLVYLDDFL 425
+ ++YLDD +
Sbjct: 414 THPSI--IIYLDDLI 426
>gi|52353559|gb|AAU44125.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1474
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ + + ++LN K+ L + L+ + IDL Y + I
Sbjct: 587 MRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTA 646
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 647 FTTRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 698
>gi|342865090|gb|EGU71667.1| hypothetical protein FOXB_17824 [Fusarium oxysporum Fo5176]
Length = 890
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
GL + ++LN+ ++ L ++ L Y + ID+ A+ ++ I +
Sbjct: 699 GLRFCVDYRALNNITVKDRYPLPLIKESLNNLSGMKYFSRIDIVSAFNNLRIRKGEEYLT 758
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRER-GVRCLVYLDDFLLASQ 429
F + +Y+ + FGL AP F + ++ LRE + C YLDD L+ S+
Sbjct: 759 AFRTRFGLYESLVMPFGLTGAPATFQR---YINDALREHLDIFCTAYLDDILIYSR 811
>gi|284434610|gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 171 DNSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQLKIRPEDIP 230
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F + N V + ++ V +V++DD L+ S++
Sbjct: 231 KTAFTTRYGLYEFTVMSFGLTNAPAYFMNMMNKVFMEFLDKFV--VVFIDDILIYSKNE 287
>gi|449663044|ref|XP_004205673.1| PREDICTED: uncharacterized protein LOC101236754 [Hydra
magnipapillata]
Length = 1975
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 319 MFNLKSLNSYV--TTKKFKLINH-QKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ + + LN+Y+ +T+ +IN + + KN + +DL +AY I + +RH +
Sbjct: 173 VLDYRELNTYIKASTRDADVINDAMREWRLMSKNSNDSVVDLRRAYLQIHVHKRHWPYQT 232
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWV-----AVLLRERGVRCLVYLDDFL 425
+YK Y T L FGL+ AP + + +V A+ RG Y+DD L
Sbjct: 233 VIYKNQRYALTRLGFGLSLAPVMMSSILWYVLQQDSALAKTTRG-----YIDDTL 282
>gi|427798369|gb|JAA64636.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 703
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + LN + + L ++ + +++DL Y I +A +
Sbjct: 98 DGNLRFCVDYRELNKHTIPDSYPLPRIDDAIDAVRNARFFSSLDLKAGYWQINVAEEDKF 157
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y+ + FGL +AP F + N V L + C+VYLDD L+ +
Sbjct: 158 KTAFRTPSGLYEFNRMPFGLRTAPSTFQRAMNTVLGTLIDHA--CVVYLDDILVIGE 212
>gi|294864646|gb|ADF46146.1| reverse transcriptase [Eleocharis xyridiformis]
Length = 143
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|294864635|gb|ADF46141.1| reverse transcriptase [Eleocharis xyridiformis]
Length = 143
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|294864628|gb|ADF46138.1| reverse transcriptase [Eleocharis xyridiformis]
Length = 143
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|294864590|gb|ADF46131.1| reverse transcriptase [Eleocharis palustris var. vigens]
Length = 143
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|294864324|gb|ADF46040.1| reverse transcriptase [Eleocharis macrostachya]
Length = 143
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|294864216|gb|ADF45996.1| reverse transcriptase [Eleocharis carniolica]
gi|294864314|gb|ADF46036.1| reverse transcriptase [Eleocharis macrostachya]
Length = 143
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|294864206|gb|ADF45993.1| reverse transcriptase [Eleocharis carniolica]
gi|294864208|gb|ADF45994.1| reverse transcriptase [Eleocharis carniolica]
gi|294864338|gb|ADF46045.1| reverse transcriptase [Eleocharis macrostachya]
Length = 143
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L+ YL +DL Y I +A + F
Sbjct: 5 DYRKLNEETVKNKFPIPVIDDLLDELKGAKYLTKLDLRAGYHQIRMAEEDKFKTAFQTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL + P F L N+V L + V LV+ DD L+ S+D
Sbjct: 65 GHYEFNVMPFGLTNVPATFQCLMNYVFKTLLRKCV--LVFFDDILIYSKD 112
>gi|406693857|gb|EKC97200.1| retrotransposon nucleocapsid protein [Trichosporon asahii var. asahii
CBS 8904]
Length = 1790
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 328 YVTTKKFKLINHQKIPLFLQKNDYLAT------IDLSQAYCHIPIARRHRRFLCFLYKGT 381
Y T + N IPL D L++ IDL AY + I F +
Sbjct: 889 YRATNAITVKNRYPIPLIQDLLDRLSSAKVFTKIDLRGAYHLVRIRAGDEWKTAFRTQFG 948
Query: 382 VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQT 441
+Y+ + FGL +AP F +L N V L E V +VYLDD L+ S+D+ + + +
Sbjct: 949 LYEYLVMPFGLCNAPATFQRLVNHVFHDLLESCV--VVYLDDILIFSEDNASHELHVREV 1006
Query: 442 L 442
L
Sbjct: 1007 L 1007
>gi|378788719|gb|AFC40209.1| polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQWVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 271
Query: 761 DTDLLQV 767
D +++
Sbjct: 272 DEQFMKI 278
>gi|77554997|gb|ABA97793.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1435
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 624 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIAKTAFTTRY 683
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 684 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 730
>gi|378788721|gb|AFC40210.1| polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQWVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 271
Query: 761 DTDLLQV 767
D +++
Sbjct: 272 DEQFMKI 278
>gi|116309657|emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + ++LN K+ L + L+ + IDL Y + I F
Sbjct: 977 MVIDYRALNEVTIKNKYPLPQIDDLFDQLKGARVFSKIDLRSGYHQLKIKSEDIPKTAFS 1036
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+ ++Y+ T +SFGL +AP F L N + + +R V +V++DD L+ S+
Sbjct: 1037 TRYSLYEFTVMSFGLTNAPAFFMNLMNKIFMEYLDRFV--VVFIDDILIYSK 1086
>gi|77554634|gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
+ + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 441 IRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIPKTT 500
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 501 FSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKDE 554
>gi|70720828|emb|CAI44646.2| OSJNBa0057M08.21 [Oryza sativa Japonica Group]
Length = 1202
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 821 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 880
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 881 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 927
>gi|302857313|ref|XP_002959840.1| hypothetical protein VOLCADRAFT_101357 [Volvox carteri f.
nagariensis]
gi|300254166|gb|EFJ39095.1| hypothetical protein VOLCADRAFT_101357 [Volvox carteri f.
nagariensis]
Length = 224
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 681 PSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLL--ASQDPIVLKNQILQTLQLLTYLGW 738
P+L P+ + R R G R L YLDDFL AS++ L Q + ++ + +LG
Sbjct: 42 PTLPPHQFFPSARCARPAR-LGARVLPYLDDFLFVFASEEHPQLGAQWV--IESIEFLGL 98
Query: 739 QVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLR 778
+ K Q PS V +LGI+ +T +P DK+ LR
Sbjct: 99 SCHPTKCQWEPSQSVYHLGITVNTAEGLFEVPADKLAKLR 138
>gi|147820415|emb|CAN60041.1| hypothetical protein VITISV_008274 [Vitis vinifera]
Length = 1429
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + ++ + N + + L K+ + D+ + I IA + + F+
Sbjct: 1240 LVINYKPLNDVLRWIRYXIPNKKDLLQRLVKSKVFSKFDMKSGFWQIQIAEKDKYKTAFV 1299
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL +AP F + N + + +VY+DD L+ S DSV
Sbjct: 1300 VPFGHYEWNVMPFGLKNAPSEFQNIMNEI---FNQFSNFIIVYIDDVLIYS-DSV 1350
>gi|3342816|gb|AAC27711.1| polyprotein [Rice tungro bacilliform virus]
Length = 1675
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
I++N K LN + T F + + + +QK + + DL + H+ + + + F
Sbjct: 1241 IVYNYKRLNDNMHTDPFNIPHKISMINLIQKANIFSKFDLKAGFHHMKLKEDFKDWTTFT 1300
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
++ FG+A+AP AF + L+ L+Y+DD L+AS +
Sbjct: 1301 CSEGLFTWNVCPFGIANAPCAFQRFMQESFGDLK----FALLYIDDILIASSNE 1350
>gi|48696570|ref|YP_024974.1| polymerase protein [Sheldgoose hepatitis B virus]
gi|40786855|gb|AAR89944.1| polymerase protein [Sheldgoose hepatitis B virus]
Length = 796
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P L + FR + G+ P T LG + R
Sbjct: 454 SLDLSQAFYHLPFNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 513
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + +LG
Sbjct: 514 FNVWTFTYMDDFLLCHPNARHLHAISNSVCNFLQELGIRINFDKTTPSPVTEIRFLGYQI 573
Query: 761 DTDLLQV 767
D+ +++
Sbjct: 574 DSKFMRI 580
>gi|18425251|gb|AAL69429.1|AC098565_11 Putative polyprotein [Oryza sativa]
gi|31430202|gb|AAP52148.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1788
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 940 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRICEEDIPKTAFTTRY 999
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1000 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1046
>gi|409038381|gb|EKM48439.1| hypothetical protein PHACADRAFT_58702, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 889
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN ++ L Q++ L++ Y +D+ Y +I I FL
Sbjct: 154 DYRKLNELTIKNRYPLPLIQELVDKLKQARYFTKLDVRWGYNNIRIKEGDEEKAAFLTNR 213
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
+++ + FGL ++P F + N + L +G +VYLDD ++ +QD
Sbjct: 214 GLFEPLVMFFGLTNSPATFQTMMNDIFRDLISQG-HVVVYLDDIMIFTQD 262
>gi|338808432|gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
Length = 1604
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + ++LN K+ L + + L+ + IDL Y + I F+
Sbjct: 727 MCIDYRALNEVTIKNKYPLPRIEDLFDQLRGASVFSKIDLRSGYHQLRIRPSDIPKTAFI 786
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
K +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 787 TKYGLYEFTVMSFGLTNAPAFFMNLMNSVFMDYLDKFV--VVFIDDILVYSQ 836
>gi|427791991|gb|JAA61447.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1140
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ + IDL + Y +P+ ++F F+ +Y+ L FG ++ F +L N +VL
Sbjct: 469 WFSRIDLCKGYWQVPLKEETKKFTAFVTPFDIYEYNRLPFGWKNSGAWFQKLMN--SVLN 526
Query: 411 RERGVRCLVYLDDFLLASQ 429
G C VY+DD ++ S+
Sbjct: 527 DYIGKFCNVYVDDIIVYSR 545
>gi|50878387|gb|AAT85162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1152
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 945 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1004
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1005 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1051
>gi|32129325|gb|AAP73852.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 823
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + +SLN K+ L + L+ + IDL Y + I
Sbjct: 40 DGSMRMCVDYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRIADIP 99
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
F + +Y+ T +SFGL +AP F L N V V ++ V +V++DD L+ S+D
Sbjct: 100 KTAFSTRYGLYEFTVMSFGLTNAPAYFMNLMNKVFVDYLDKFV--VVFIDDILIYSKDE 156
>gi|19881536|gb|AAM00937.1|AC021892_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1052
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 921 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 980
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 981 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1027
>gi|51091547|dbj|BAD36284.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1620
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 745 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 804
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 805 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 851
>gi|291238548|ref|XP_002739190.1| PREDICTED: polyprotein-like [Saccoglossus kowalevskii]
Length = 465
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 60 VPRTFMSTDASDV-GWGAMVGNVSVQGVWTQAQRSWH----INLKELFTVRAAISSNPSL 114
P T + TDAS V GA W+ + S + I KELF + + L
Sbjct: 311 TPNTNLYTDASSVIACGAFYNKQWFTLPWSPDKCSINPPLSIEWKELFPILISCLIWGHL 370
Query: 115 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 174
++ DN+ ++ I K+G R +++ + + + N H++ I G NS+
Sbjct: 371 WHGQKIMFHCDNEGIVN-IWKKGSSRCQRIMSLVRAIFFTAANGNFHVMIAHIRGTNNSI 429
Query: 175 ADALSR------QALIPD 186
AD+LSR + L+PD
Sbjct: 430 ADSLSRLQMKQFRQLVPD 447
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 806 VPRTFMSTDASDV-GWGAMVGNVSVQGVWTQAQRSWH----INLKELFTVRAAISSNPSL 860
P T + TDAS V GA W+ + S + I KELF + + L
Sbjct: 311 TPNTNLYTDASSVIACGAFYNKQWFTLPWSPDKCSINPPLSIEWKELFPILISCLIWGHL 370
Query: 861 VANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 920
++ DN+ ++ I K+G R +++ + + + N H++ I G NS+
Sbjct: 371 WHGQKIMFHCDNEGIVN-IWKKGSSRCQRIMSLVRAIFFTAANGNFHVMIAHIRGTNNSI 429
Query: 921 ADALSR------QALIPD 932
AD+LSR + L+PD
Sbjct: 430 ADSLSRLQMKQFRQLVPD 447
>gi|307202550|gb|EFN81895.1| Uncharacterized protein F44E2.2 [Harpegnathos saltator]
Length = 1389
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+ +D++QAY IP+ R++ F + Y L FG+ +A +F +
Sbjct: 943 FSKLDITQAYWQIPLTANSRQYTGFSFDHQTYIFERLPFGIKTAGASFTRAIEAALKGKP 1002
Query: 412 ERGVRCLVYLDDFLLASQDSV 432
E +VYLDD L+AS++
Sbjct: 1003 ELRKHVIVYLDDVLIASENET 1023
>gi|301604726|ref|XP_002932020.1| PREDICTED: hypothetical protein LOC100489555 [Xenopus (Silurana)
tropicalis]
Length = 721
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 87 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 146
W + ++ L ELF + AI +N V+ +DN +V+ I Q S +LA
Sbjct: 601 WVAGGLTRNLTLLELFPILVAIELWGHWFSNKNVIFNTDNMSVVLAINNQTS-SSGPVLA 659
Query: 147 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+ L+L + NI +PG N +AD+LSR
Sbjct: 660 LLRHLVLRCLQFNICFRAQHLPGVANDIADSLSR 693
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 833 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 892
W + ++ L ELF + AI +N V+ +DN +V+ I Q S +LA
Sbjct: 601 WVAGGLTRNLTLLELFPILVAIELWGHWFSNKNVIFNTDNMSVVLAINNQTS-SSGPVLA 659
Query: 893 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ L+L + NI +PG N +AD+LSR
Sbjct: 660 LLRHLVLRCLQFNICFRAQHLPGVANDIADSLSR 693
>gi|110289019|gb|ABB47436.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1504
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 622 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDFPKTAFTTRY 681
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 682 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 728
>gi|77552428|gb|ABA95225.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1795
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 913 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 972
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 973 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1019
>gi|301619187|ref|XP_002938982.1| PREDICTED: hypothetical protein LOC100486285 [Xenopus (Silurana)
tropicalis]
Length = 1137
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 67 TDASDVGWGAMVGNVSVQGVWTQAQ--RSW-------HINLKELFTVRAAISSNPSLVAN 117
TDA+ G+ QG W AQ W ++ ELF + A L+AN
Sbjct: 989 TDAA----GSKGMGAYFQGQWCSAQWPSFWRDTDLIRNLTCLELFPIVVASHIWGELLAN 1044
Query: 118 HTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADA 177
V+ DN +V+ I Q S +L + L+L ++NI +PG NS+ADA
Sbjct: 1045 QRVIFWCDNSSVVQVINNQTS-SSPPVLNLLRALVLQCLRMNIWFRARHVPGVQNSIADA 1103
Query: 178 LSR 180
LSR
Sbjct: 1104 LSR 1106
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 813 TDASDVGWGAMVGNVSVQGVWTQAQ--RSW-------HINLKELFTVRAAISSNPSLVAN 863
TDA+ G+ QG W AQ W ++ ELF + A L+AN
Sbjct: 989 TDAA----GSKGMGAYFQGQWCSAQWPSFWRDTDLIRNLTCLELFPIVVASHIWGELLAN 1044
Query: 864 HTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADA 923
V+ DN +V+ I Q S +L + L+L ++NI +PG NS+ADA
Sbjct: 1045 QRVIFWCDNSSVVQVINNQTS-SSPPVLNLLRALVLQCLRMNIWFRARHVPGVQNSIADA 1103
Query: 924 LSR 926
LSR
Sbjct: 1104 LSR 1106
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 457 SHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFI 516
SH L+AN V+ DN +V+ I Q S +L + L+L ++NI +
Sbjct: 1035 SHIWGELLANQRVIFWCDNSSVVQVINNQTS-SSPPVLNLLRALVLQCLRMNIWFRARHV 1093
Query: 517 PGKCNSLADALSR 529
PG NS+ADALSR
Sbjct: 1094 PGVQNSIADALSR 1106
>gi|170102462|ref|XP_001882447.1| reverse transcriptase-RNase H-integrase [Laccaria bicolor
S238N-H82]
gi|164642819|gb|EDR07074.1| reverse transcriptase-RNase H-integrase [Laccaria bicolor
S238N-H82]
Length = 745
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LNSY + L + + LQ +D+ Y ++ I + F+ K +++
Sbjct: 455 LNSYTVKNTYPLPSIDDLLNKLQGATVFTKLDIQWGYNNVQIKQGDEWKGAFITKRGLFE 514
Query: 385 RTCLSFGLASAPQAF-AQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
T + FG+ ++P F A ++++ A ++ + V L+YLDD L+ S+D
Sbjct: 515 LTVMFFGMTNSPATFQAMMNDYFADMITQGWV--LIYLDDILIFSKD 559
>gi|18652524|gb|AAL77157.1|AC091732_8 Putative polyprotein [Oryza sativa Japonica Group]
gi|31431769|gb|AAP53495.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1839
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + ++LN K+ L + L+ + IDL Y + I F
Sbjct: 954 MCIDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFT 1013
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+ +Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1014 TRYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1063
>gi|378788725|gb|AFC40212.1| polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQWVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 271
Query: 761 DTDLLQV 767
D +++
Sbjct: 272 DEHFMKI 278
>gi|38347631|emb|CAE05227.2| OSJNBa0011K22.9 [Oryza sativa Japonica Group]
Length = 1699
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 916 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 975
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 976 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1022
>gi|62733085|gb|AAX95202.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
gi|77549495|gb|ABA92292.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1795
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 913 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 972
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 973 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1019
>gi|242117516|dbj|BAH79999.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1374
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 624 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 683
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 684 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 730
>gi|388856200|emb|CCF50191.1| uncharacterized protein [Ustilago hordei]
Length = 1324
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 356 DLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAP---QAFAQLSNWVAVLLRE 412
DL+ A+ H+ A R L + G Y T L+FG SAP FA+ +WV L
Sbjct: 662 DLTNAFRHVVTALDDARLLGLTFDGLFYMETGLTFGGRSAPWLFNLFAEALHWVVQLTTS 721
Query: 413 RGVRCLVYLDDFLLASQDSVV 433
V+ YLDDF A+ +
Sbjct: 722 HPVKH--YLDDFFGATPSTAT 740
>gi|378788717|gb|AFC40208.1| polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQWVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 271
Query: 761 DTDLLQV 767
D +++
Sbjct: 272 DEQFMKI 278
>gi|296142307|gb|ADG96108.1| polymerase [Duck hepatitis B virus]
Length = 788
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTDIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DEKYMKI 572
>gi|57834100|emb|CAE04765.3| OSJNBa0079C19.6 [Oryza sativa Japonica Group]
Length = 1998
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 878 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 937
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 938 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 984
>gi|348533329|ref|XP_003454158.1| PREDICTED: uncharacterized protein K02A2.6-like [Oreochromis
niloticus]
Length = 1289
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 308 IGNLANTGLSIMFNLK-SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPI 366
+ A+ + I + K S+N + ++ L + I + + + IDL+QAY + +
Sbjct: 475 VSKKASDSVRICGDFKVSVNPVLRIDQYPLPRIEDIFTAVAGGKHFSKIDLAQAYLQMEV 534
Query: 367 ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
R++L +YQ L FG+ASAP + + + VL G +C +LDD ++
Sbjct: 535 EETSRKYLVINTHKGLYQYNRLVFGIASAPAVWQRAMD--QVLQGIPGTQC--FLDDIIV 590
Query: 427 AS 428
+
Sbjct: 591 TA 592
>gi|308459895|ref|XP_003092259.1| hypothetical protein CRE_13741 [Caenorhabditis remanei]
gi|308253672|gb|EFO97624.1| hypothetical protein CRE_13741 [Caenorhabditis remanei]
Length = 2814
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN+ + L N Q++ +N T+D + + IP+ H F
Sbjct: 1961 DFRALNNITEPVQSVLPNLQELLDITAQNPIYTTLDFASGFHQIPLEEEHCERTAFASFM 2020
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
VY+ + GL +P F ++ + LLR R Y+DD + S D+
Sbjct: 2021 GVYEYIRMPMGLKGSPGTFQRI---MHNLLRPLRARVFCYIDDIIATSPDA 2068
>gi|154283813|ref|XP_001542702.1| hypothetical protein HCAG_02873 [Ajellomyces capsulatus NAm1]
gi|150410882|gb|EDN06270.1| hypothetical protein HCAG_02873 [Ajellomyces capsulatus NAm1]
Length = 1164
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
LQ + IDL AY I IA F + Y+ + GL +AP F N
Sbjct: 391 LQNAIIFSKIDLRDAYYRIRIAEGDEWKTAFRTRYGSYEFRVMPMGLCNAPATFQSYINE 450
Query: 406 VAVLLRERGVRCLVYLDDFLLASQDS 431
V L + + C+VYLDD L+ SQ++
Sbjct: 451 VLKGLVD--ICCIVYLDDILIYSQNT 474
>gi|427781083|gb|JAA55993.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1119
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y ++IDL Y I + R F+ +YQ + FGL +AP F ++ + ++L
Sbjct: 348 YFSSIDLRSGYWQIAVDPMDREKTAFVTPDGLYQFKVMPFGLCNAPATFERMMD--SLLH 405
Query: 411 RERGVRCLVYLDDFLL------ASQDSVVLKNQIFQTLPVNLSGNCSRSGRR 456
+ CL YLDD ++ A + + +F+ + L+ + R GRR
Sbjct: 406 GFKWSTCLCYLDDVIVFAPTFEAHLERLSKILDVFRLAGLQLNSSKCRFGRR 457
>gi|78708033|gb|ABB47008.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 922 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 981
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 982 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1028
>gi|77555576|gb|ABA98372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1800
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 918 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 977
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 978 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1024
>gi|317138875|ref|XP_003189096.1| gag-pol polyprotein [Aspergillus oryzae RIB40]
Length = 1941
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 57 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 106
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 1352 HDPAKQTIIETDASDYAIGARMVQAGPDGKLRPIAFESRKLVQAELNYDIHDKELLAIVS 1411
Query: 107 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 164
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 1412 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 1464
Query: 165 YFIPGKCNSLADALSRQ 181
G N ADALSR+
Sbjct: 1465 -HCKGSENGQADALSRR 1480
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 803 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 852
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 1352 HDPAKQTIIETDASDYAIGARMVQAGPDGKLRPIAFESRKLVQAELNYDIHDKELLAIVS 1411
Query: 853 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 910
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 1412 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 1464
Query: 911 YFIPGKCNSLADALSRQ 927
G N ADALSR+
Sbjct: 1465 -HCKGSENGQADALSRR 1480
>gi|189242076|ref|XP_001808495.1| PREDICTED: similar to orf [Tribolium castaneum]
Length = 1475
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L+ + T+DL+ Y IP+A F+
Sbjct: 670 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLKGAKFFTTLDLASGYFQIPMATESIPKTAFV 729
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
+ + FGLA+AP F + N V L+ + C Y+DD L+ S+D
Sbjct: 730 TPDGHCEFVRMPFGLANAPAVFQRAMNKVLGPLQFQTAFC--YIDDLLIPSKD 780
>gi|38017495|gb|AAR08050.1| polyprotein [Duck hepatitis B virus]
Length = 788
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTDIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DEKYMKI 572
>gi|22857594|gb|AAN09868.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1802
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 920 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 979
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 980 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1026
>gi|326667710|ref|XP_002662026.2| PREDICTED: hypothetical protein LOC100333032 [Danio rerio]
Length = 1219
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 355 IDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERG 414
IDL++ Y +P++ + F G +Q L FGL AP F ++ + +LLR
Sbjct: 733 IDLTKGYWQLPLSESAKEKTAFSTPGGHWQYRVLPFGLHGAPATFQRMMD---ILLRPHQ 789
Query: 415 VRCLVYLDDFLLASQ 429
YLDD ++ S+
Sbjct: 790 PYVAAYLDDLIVHSE 804
>gi|78708041|gb|ABB47016.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1849
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 967 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1026
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1027 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1073
>gi|390359721|ref|XP_783336.3| PREDICTED: uncharacterized protein LOC578054 [Strongylocentrotus
purpuratus]
Length = 1458
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN + + + ++I L K+ Y + +DL++ Y IP+ + F+
Sbjct: 1097 DYRKLNMNTVSDAEPIPDQEEIFTALAKDHYFSKLDLTKGYWQIPLTENAKPRTAFITPN 1156
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRE-RGVRCLVYLDDFLL 426
++Q + FGL +AP F+++ + LLR+ GV ++DD L+
Sbjct: 1157 GLFQFKTMPFGLINAPATFSRV---MRTLLRDLDGVHN--FIDDILV 1198
>gi|294933603|ref|XP_002780784.1| hypothetical protein Pmar_PMAR027397 [Perkinsus marinus ATCC 50983]
gi|239890848|gb|EER12579.1| hypothetical protein Pmar_PMAR027397 [Perkinsus marinus ATCC 50983]
Length = 1659
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 86 VWTQAQRSWHINLKELFTVRAA---ISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSH 142
+W AQ +WH N KE F + A ++S + V+ TV SD+ T I+++ L
Sbjct: 1269 MWKNAQYNWHQNRKEAFALAGAYLFLNSVVAYVSPLTVRFWSDSHTAISWVTGGSKLTCE 1328
Query: 143 AL-LAETKKLLLIMSKL------NIHIVP--YFIPGKCNSLADALSRQALIPDWHLLPSL 193
++ +L+ M+ L +VP Y + GK NS AD LSR + + W ++ +L
Sbjct: 1329 SIERVAISRLIDAMADLRESWHRRYGLVPVTYHLAGKKNSSADELSRLSAL--WKIVAAL 1386
Query: 194 TE 195
+
Sbjct: 1387 GD 1388
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 832 VWTQAQRSWHINLKELFTVRAA---ISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSH 888
+W AQ +WH N KE F + A ++S + V+ TV SD+ T I+++ L
Sbjct: 1269 MWKNAQYNWHQNRKEAFALAGAYLFLNSVVAYVSPLTVRFWSDSHTAISWVTGGSKLTCE 1328
Query: 889 AL-LAETKKLLLIMSKL------NIHIVP--YFIPGKCNSLADALSRQALIPDWHLLPSL 939
++ +L+ M+ L +VP Y + GK NS AD LSR + + W ++ +L
Sbjct: 1329 SIERVAISRLIDAMADLRESWHRRYGLVPVTYHLAGKKNSSADELSRLSAL--WKIVAAL 1386
Query: 940 TE 941
+
Sbjct: 1387 GD 1388
>gi|50300503|gb|AAT73646.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1764
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 882 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 941
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 942 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 988
>gi|34328897|gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLF--LQKNDYLATIDLSQAYCHIPIARRHRRF 373
L ++ N + LN ++ KF + N K+ LF L K + DL + + I R
Sbjct: 1440 LRLVINYQPLNHFLQDDKFPIPN--KLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPK 1497
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAF--AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F +Q + FGL +AP F A + + +L LVY+DD LL S
Sbjct: 1498 TGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQPILF-----SALVYIDDILLFSETL 1552
Query: 429 QDSVVLKNQI 438
+D + L NQ
Sbjct: 1553 EDHIKLLNQF 1562
>gi|32487330|emb|CAE05905.1| OSJNBa0061C08.12 [Oryza sativa Japonica Group]
Length = 1971
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 851 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 910
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 911 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 957
>gi|26800785|emb|CAD29590.1| polymerase [Crane hepatitis B virus]
Length = 785
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 443 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGTEISRR 502
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K P + + +LG
Sbjct: 503 FNVWTFTYMDDFLLCHPNARHLNAISHAVCTFLQELGIRINFDKMTPSPVNEIRFLGYVI 562
Query: 761 DTDLLQVR 768
D +++
Sbjct: 563 DEQFMKIE 570
>gi|432955950|ref|XP_004085643.1| PREDICTED: uncharacterized protein LOC101166850, partial [Oryzias
latipes]
Length = 1060
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 288 QIASDRSSNGLLSGNDRGHD----IGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIP 343
++ D ++NG++ +D + G + + LN+ + L
Sbjct: 123 ELIKDMAANGIIEPSDSPWAAPVVMVRKKGGGWRPCVDYRRLNAVTRKDSYPLPRIDDAL 182
Query: 344 LFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLS 403
++ + + +++DL Y + +A R F ++Q + FGL +AP F +L
Sbjct: 183 DYVTGSCWFSSLDLRSGYWQVELAPEARPKTAFTIGQGLWQFKVMPFGLCNAPATFERLM 242
Query: 404 NWVAVLLRERGVRCLVYLDDFLL 426
VL RC+VYLDD L+
Sbjct: 243 E--RVLKDIPRTRCVVYLDDLLV 263
>gi|317141366|ref|XP_001818504.2| gag-pol polyprotein [Aspergillus oryzae RIB40]
Length = 1941
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 57 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 106
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 1352 HDPAKQTIIETDASDYAIGARMVQAGPDGKLRPIAFESRKLVQAELNYDIHDKELLAIVS 1411
Query: 107 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 164
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 1412 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 1464
Query: 165 YFIPGKCNSLADALSRQ 181
G N ADALSR+
Sbjct: 1465 -HCKGSENGQADALSRR 1480
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 803 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 852
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 1352 HDPAKQTIIETDASDYAIGARMVQAGPDGKLRPIAFESRKLVQAELNYDIHDKELLAIVS 1411
Query: 853 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 910
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 1412 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 1464
Query: 911 YFIPGKCNSLADALSRQ 927
G N ADALSR+
Sbjct: 1465 -HCKGSENGQADALSRR 1480
>gi|116311093|emb|CAH68022.1| H0807C06-H0308C08.9 [Oryza sativa Indica Group]
Length = 1804
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 950 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1009
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1010 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1056
>gi|52353726|gb|AAU44292.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1816
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 934 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 993
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 994 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1040
>gi|58531955|emb|CAE03064.2| OSJNBa0089E12.2 [Oryza sativa Japonica Group]
Length = 1764
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 882 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLCSGYHQLRIREEDIPKTAFTTRY 941
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 942 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 988
>gi|21741597|emb|CAD39713.1| OSJNBa0052P16.18 [Oryza sativa Japonica Group]
Length = 1804
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 922 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 981
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 982 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1028
>gi|449682016|ref|XP_004209974.1| PREDICTED: uncharacterized protein LOC101240818 [Hydra
magnipapillata]
Length = 617
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 319 MFNLKSLNSYV--TTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 376
+ + + LN+YV +T+ +IN L + +DL Y I + +RH +
Sbjct: 80 VLDYRELNTYVKASTRDADVINDAMREWRLMSKNSNDLVDLRSTYLQIHVHKRHWPYQTV 139
Query: 377 LYKGTVYQRTCLSFGLASAPQAFAQLSNWV-----AVLLRERGVRCLVYLDDFL 425
+YK Y T L FGL+ AP + + +V A+ RG Y+DD L
Sbjct: 140 IYKNQRYALTRLGFGLSLAPVTMSSILRYVLQQDSALAKTTRG-----YIDDTL 188
>gi|77554807|gb|ABA97603.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1753
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 871 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 930
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 931 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 977
>gi|410026811|gb|AFV52546.1| DNA polymerase [Duck hepatitis B virus]
Length = 788
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGAEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTDIRFLGYQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DEKYMKI 572
>gi|90265240|emb|CAH67693.1| H0624F09.1 [Oryza sativa Indica Group]
gi|90399167|emb|CAJ86096.1| H0818H01.18 [Oryza sativa Indica Group]
Length = 1805
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 923 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 982
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 983 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1029
>gi|82055772|sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT
gi|34328896|gb|AAO67368.1| polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLF--LQKNDYLATIDLSQAYCHIPIARRHRRF 373
L ++ N + LN ++ KF + N K+ LF L K + DL + + I R
Sbjct: 1440 LRLVINYQPLNHFLQDDKFPIPN--KLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPK 1497
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAF--AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F +Q + FGL +AP F A + + +L LVY+DD LL S
Sbjct: 1498 TGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQPILF-----SALVYIDDILLFSETL 1552
Query: 429 QDSVVLKNQI 438
+D + L NQ
Sbjct: 1553 EDHIKLLNQF 1562
>gi|77555226|gb|ABA98022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1571
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 324 SLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVY 383
+LN K+ L+ + L+ + + IDL Y + I F + +Y
Sbjct: 839 ALNEVTIKNKYPLLRIDDLFDQLKGAEVFSKIDLRSGYHQLRIQEEDIPKTAFTTRYGLY 898
Query: 384 QRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+
Sbjct: 899 ECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFV--VVFIDDILIYSK 942
>gi|22138463|gb|AAM93447.1| putative polyprotein [Oryza sativa Japonica Group]
gi|78708018|gb|ABB46993.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1499
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 617 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 676
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 677 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 723
>gi|198412694|ref|XP_002119324.1| PREDICTED: similar to pol polyprotein [Ciona intestinalis]
Length = 509
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN+ + L + L + + T+DL+ Y + + + + F G
Sbjct: 192 DFRKLNAVTIKDSYPLPRIDDMFDLLGGSSWFHTLDLASGYWQVALDPKDKEKTAFTIAG 251
Query: 381 T-VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD---SVVLKN 436
++Q + FGL +AP F +L V L R C VYLDD + S D S++
Sbjct: 252 KGLFQFKVMCFGLTNAPGTFERLMEEVLKGLLNR--ICAVYLDDVICFSNDFSSSLLHLE 309
Query: 437 QIFQ 440
++FQ
Sbjct: 310 KVFQ 313
>gi|116317857|emb|CAH65888.1| OSIGBa0096I22.1 [Oryza sativa Indica Group]
Length = 1635
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 860 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 919
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 920 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 966
>gi|108711739|gb|ABF99534.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 978 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1037
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1038 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1084
>gi|54287545|gb|AAV31289.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1721
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 873 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 932
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 933 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 979
>gi|38344459|emb|CAE04930.2| OSJNBa0017P10.7 [Oryza sativa Japonica Group]
gi|38345444|emb|CAE03296.2| OSJNBb0046P18.12 [Oryza sativa Japonica Group]
Length = 1469
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 587 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 646
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 647 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 693
>gi|108707255|gb|ABF95050.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1790
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 908 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 967
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 968 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1014
>gi|38347259|emb|CAE05306.2| OSJNBa0056L23.4 [Oryza sativa Japonica Group]
Length = 1785
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 903 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 962
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 963 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1009
>gi|83753113|gb|AAR29046.2| gag-pol polyprotein [Aspergillus flavus]
Length = 1998
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 57 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 106
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 1351 HDPAKQTIIETDASDYAIGARMVQAGPDGKPRPIAFESRKLVQAELNYDIHDKELLAIVS 1410
Query: 107 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 164
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 1411 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 1463
Query: 165 YFIPGKCNSLADALSRQ 181
G N ADALSR+
Sbjct: 1464 -HCKGSENGQADALSRR 1479
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 20/137 (14%)
Query: 803 HPPVPRTFMSTDASDVGWGAMVGNVSVQG----------VWTQAQRSWHINLKELFTVRA 852
H P +T + TDASD GA + G QA+ ++ I+ KEL + +
Sbjct: 1351 HDPAKQTIIETDASDYAIGARMVQAGPDGKPRPIAFESRKLVQAELNYDIHDKELLAIVS 1410
Query: 853 AISSNPSLV--ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVP 910
A + A H ++++SD+K + + + R A AET +S+ + I
Sbjct: 1411 AFKKWRVYLEGAQHQIIVKSDHKNLTYFTTTKELTRRQARWAET------LSQYDFRIE- 1463
Query: 911 YFIPGKCNSLADALSRQ 927
G N ADALSR+
Sbjct: 1464 -HCKGSENGQADALSRR 1479
>gi|77555686|gb|ABA98482.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1803
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 921 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 980
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 981 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1027
>gi|77555397|gb|ABA98193.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 909 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 968
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 969 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1015
>gi|62733893|gb|AAX96002.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550274|gb|ABA93071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 738
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 344 DYRALNEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRICAEDIPKTAFTMQY 403
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQI 438
+Y+ T +SFGL +AP F L N V + E+ V +V++DD L+ SQ K +
Sbjct: 404 GLYEFTVMSFGLTNAPTFFMNLMNKVFMEYLEKFV--VVFIDDILVYSQSEEEHKQHL 459
>gi|22725933|gb|AAN04943.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431094|gb|AAP52925.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1803
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 921 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 980
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 981 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1027
>gi|391342219|ref|XP_003745420.1| PREDICTED: uncharacterized protein K02A2.6-like, partial
[Metaseiulus occidentalis]
Length = 813
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 668 LCFLIPMDMSSFRPSLSSPGVCPTIKLGRR-LRERGVRCLVYLDDFLLASQDPIVLKNQI 726
+C IP DM S S S V + L L+ GV LVYLDD L+ ++
Sbjct: 102 VCHPIP-DMESIMASFSGNRVFTQLDLSDAYLQLDGV--LVYLDDILVMGSSQTEHDGRL 158
Query: 727 LQTLQLLTYLGWQVNLKKSQI-IPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD--RLQT 783
L+ L L G+++ L K PS V YLG+ D D +R KI +R+ R +
Sbjct: 159 LKVLSRLQEWGFRLGLAKCHFNAPS--VKYLGVIVDKD--GIRADPQKIQAIRNLRRPEN 214
Query: 784 QALIELKWFYHNL--TGFT--------PL----HPPVPRTFMSTDASDVGWGAMV----G 825
+ + + H L + F PL + P + ++ DA + G G ++
Sbjct: 215 ISEVRISSGTHQLLWSAFEKVKDVLSGPLVLAHYDPRQKLIVAADACETGIGGVLLQRYA 274
Query: 826 NVSVQGVW------TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI 879
+ S + V+ AQR++ KE + + + VLQ+D++ ++A
Sbjct: 275 DSSTKAVFHISKSLNPAQRNYSQIEKEALALITTVERLRKFIWGRRFVLQTDHRPLLALF 334
Query: 880 R 880
R
Sbjct: 335 R 335
>gi|339258784|ref|XP_003369578.1| reverse transcriptase family protein [Trichinella spiralis]
gi|316966166|gb|EFV50782.1| reverse transcriptase family protein [Trichinella spiralis]
Length = 387
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ +T+DL+ +Y + + + + F +YQ + FGL AP F +L +L
Sbjct: 248 WFSTLDLASSYLQVEVEEQDQEKTAFTTPFVLYQFKVMPFGLCYAPVTFQRLMEIALRVL 307
Query: 411 RERGVRCLVYLDDFLL 426
G CLVYLDD ++
Sbjct: 308 --VGSDCLVYLDDVIV 321
>gi|54287622|gb|AAV31366.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1826
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 967 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1026
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1027 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1073
>gi|58532064|emb|CAD40396.3| OSJNBa0004L19.15 [Oryza sativa Japonica Group]
Length = 1821
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 939 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 998
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 999 GLYEFTVMSFGLTNAPAFFMNLMNQVFMEYLDKFV--VVFIDDILVYSQ 1045
>gi|14575753|ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT
gi|14574598|gb|AAK68664.1| ORF I polyprotein [petunia vein clearing virus]
Length = 2179
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 14/130 (10%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLF--LQKNDYLATIDLSQAYCHIPIARRHRRF 373
L ++ N + LN ++ KF + N K+ LF L K + DL + + I R
Sbjct: 1439 LRLVINYQPLNHFLQDDKFPIPN--KLTLFSHLSKAKLFSKFDLKSGFWQLGIHPNERPK 1496
Query: 374 LCFLYKGTVYQRTCLSFGLASAPQAF--AQLSNWVAVLLRERGVRCLVYLDDFLLAS--- 428
F +Q + FGL +AP F A + + +L LVY+DD LL S
Sbjct: 1497 TGFCIPDRHFQWKVMPFGLKTAPSLFQKAMIKIFQPILF-----SALVYIDDILLFSETL 1551
Query: 429 QDSVVLKNQI 438
+D + L NQ
Sbjct: 1552 EDHIKLLNQF 1561
>gi|22725911|gb|AAN04921.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31430214|gb|AAP52160.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1786
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 904 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 963
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 964 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1010
>gi|19881755|gb|AAM01156.1|AC113336_8 Putative retroelement [Oryza sativa Japonica Group]
gi|31430462|gb|AAP52371.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 902 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 961
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 962 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1008
>gi|270017029|gb|EFA13475.1| hypothetical protein TcasGA2_TC012972 [Tribolium castaneum]
Length = 1293
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L + L+ + T+DL+ Y IP+A F+
Sbjct: 670 MCVDYRQLNSKTIKDRFPLPRVDEHLDKLKGAKFFTTLDLASGYFQIPMATESIPKTAFV 729
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
+ + FGLA+AP F + N V L+ + C Y+DD L+ S+D
Sbjct: 730 TPDGHCEFVRMPFGLANAPAVFQRAMNKVLGPLQFQTAFC--YIDDLLIPSKD 780
>gi|116310099|emb|CAH67119.1| H0502G05.10 [Oryza sativa Indica Group]
Length = 1826
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 944 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1003
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1004 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1050
>gi|110288767|gb|AAP52585.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1797
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 915 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 974
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 975 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1021
>gi|110288804|gb|ABG65986.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1840
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 958 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1017
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1018 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1064
>gi|108708199|gb|ABF95994.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1534
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 652 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 711
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 712 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 758
>gi|77556441|gb|ABA99237.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1790
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 908 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 967
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 968 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1014
>gi|21672037|gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Japonica Group]
gi|31431043|gb|AAP52881.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 939 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 998
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 999 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1045
>gi|50300553|gb|AAT73694.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1778
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 896 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 955
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 956 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1002
>gi|13992680|gb|AAK51574.1|AC022352_10 Putative retroelement [Oryza sativa Japonica Group]
gi|31431004|gb|AAP52842.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1810
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 928 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 987
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 988 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1034
>gi|308479231|ref|XP_003101825.1| hypothetical protein CRE_12078 [Caenorhabditis remanei]
gi|308262735|gb|EFP06688.1| hypothetical protein CRE_12078 [Caenorhabditis remanei]
Length = 2586
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 8/142 (5%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN+ + L N Q++ +N T+D + + IP+ H F
Sbjct: 1809 DYRALNNITEPVQSVLPNIQELLDVTAQNPIYTTLDFASGFHQIPVEEAHCERTAFASFM 1868
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
VY+ + GL +P F ++ + LLR R Y+DD + S ++ I +
Sbjct: 1869 GVYEYIRMPMGLKGSPGTFQRI---MRSLLRPLKARVFCYIDDIITTSPNAEKHLRDIEE 1925
Query: 441 TLPVNLSGNCSRSGRRSHPTHS 462
L G RSG + P+ +
Sbjct: 1926 VL-----GMIQRSGMKLKPSKA 1942
>gi|53981932|gb|AAV25050.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1804
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 922 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 981
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 982 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1028
>gi|38347553|emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group]
Length = 1092
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 282 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 341
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 342 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 388
>gi|38344634|emb|CAE05067.2| OSJNBa0094P09.6 [Oryza sativa Japonica Group]
Length = 1803
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 921 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 980
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 981 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1027
>gi|77556493|gb|ABA99289.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 923 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 982
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 983 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1029
>gi|26800782|emb|CAD29588.1| polymerase [Crane hepatitis B virus]
Length = 785
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 443 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGTEISRR 502
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K P + + +LG
Sbjct: 503 FNVWTFTYMDDFLLCHPNARHLNAISHAVCTFLQELGIRINFDKMTPSPVNEIRFLGYVI 562
Query: 761 DTDLLQVR 768
D +++
Sbjct: 563 DEQFMKIE 570
>gi|55168118|gb|AAV43985.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168194|gb|AAV44060.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1772
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 890 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 949
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 950 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 996
>gi|38344635|emb|CAE05068.2| OSJNBa0094P09.7 [Oryza sativa Japonica Group]
Length = 1804
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 922 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 981
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 982 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1028
>gi|19075455|ref|NP_587955.1| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|19114896|ref|NP_593984.1| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|19115321|ref|NP_594409.1| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|68000596|ref|NP_001018276.1| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|173439|gb|AAA91215.1| protease, reverse transcriptase, RNAse H, integrase protein
[Schizosaccharomyces pombe]
gi|2388948|emb|CAB11682.1| retrotransposable element [Schizosaccharomyces pombe]
gi|6318248|emb|CAB60245.1| retrotransposable element [Schizosaccharomyces pombe]
gi|7340821|emb|CAB83007.1| retrotransposable element [Schizosaccharomyces pombe]
gi|19571555|emb|CAD27466.1| retrotransposable element [Schizosaccharomyces pombe]
Length = 1333
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L ++ + K LN YV + L +++ +Q + +DL AY I + + L
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F V++ + +G+++AP F N + +E V C Y+DD L+ S+
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDILIHSK 573
>gi|321459492|gb|EFX70545.1| hypothetical protein DAPPUDRAFT_257014 [Daphnia pulex]
Length = 424
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 50/162 (30%)
Query: 736 LGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIP----PLRDR----------- 780
LG+ +NL+KS PS ++YLG+ D+ ++ D + PLRD
Sbjct: 253 LGFLINLEKSVTTPSRVMEYLGMVIDSVQEVKKMCTDALNTGQVPLRDVASILGNFTWAI 312
Query: 781 ---------------------------------LQTQALIELKWFYHNL--TGFTPLHPP 805
L A +L+W+ NL P
Sbjct: 313 PTIPFAQSHYRSMQRFYINESQKALGDLSVKCVLSVGARSDLEWWVANLEEANGKEFFPK 372
Query: 806 VPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKEL 847
V + +DAS GWGA+ ++ +G WT Q + HIN EL
Sbjct: 373 VADMEIFSDASRSGWGAVCDGITTRGPWTMDQSTLHINCLEL 414
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 39 ALIELKWFYHNL--TGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHI 96
A +L+W+ NL P V + +DAS GWGA+ ++ +G WT Q + HI
Sbjct: 350 ARSDLEWWVANLEEANGKEFFPKVADMEIFSDASRSGWGAVCDGITTRGPWTMDQSTLHI 409
Query: 97 NLKEL 101
N EL
Sbjct: 410 NCLEL 414
>gi|116311097|emb|CAH68025.1| OSIGBa0136O08-OSIGBa0153H12.3 [Oryza sativa Indica Group]
Length = 1826
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 944 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1003
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1004 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1050
>gi|115928363|ref|XP_001199932.1| PREDICTED: uncharacterized protein LOC763830, partial
[Strongylocentrotus purpuratus]
Length = 1302
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
++ +DL + Y +P++RR + F+ ++Q + FG+ +AP F +L V L
Sbjct: 914 FITKLDLMKGYWQVPLSRRAKEVSAFVTPQGLFQCRVMPFGMRNAPATFQRLMTDVIAGL 973
Query: 411 RERGVRCLVYLDDFLLAS 428
+VY+DD L+ S
Sbjct: 974 D----NVVVYIDDILVFS 987
>gi|21740445|emb|CAD41630.1| OSJNBa0091D06.6 [Oryza sativa Japonica Group]
Length = 1799
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 917 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 976
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 977 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1023
>gi|13992691|gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1862
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 980 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1039
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1040 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1086
>gi|77554650|gb|ABA97446.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1847
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 965 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1024
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1025 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1071
>gi|22725935|gb|AAN04945.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431096|gb|AAP52927.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1825
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 943 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLHSGYHQLRIREEDIPKTAFTTRY 1002
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1003 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1049
>gi|53981184|gb|AAV24824.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1661
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 798 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 857
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 858 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 904
>gi|50300512|gb|AAT73655.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1747
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 888 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 947
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 948 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 994
>gi|38346850|emb|CAD39932.2| OSJNBa0091C12.10 [Oryza sativa Japonica Group]
Length = 1461
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 579 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSMIDLRSGYHQLRIREEDIPKTAFTTRY 638
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 639 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 685
>gi|378788723|gb|AFC40211.1| polymerase, partial [Duck hepatitis B virus]
Length = 292
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 152 SLDLSQAFYHLPLNPASSSRLAVSDGQWVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 211
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 212 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 271
Query: 761 DTDLLQV 767
D +++
Sbjct: 272 DEHFMKI 278
>gi|281211420|gb|EFA85584.1| hypothetical protein PPL_01367 [Polysphondylium pallidum PN500]
Length = 1436
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 293 RSSNGLLSGNDRGHD-IGNLANTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDY 351
+ N L+S ++ +D L + G + + +SLN + L N ++ +
Sbjct: 383 ETRNCLISQSESDNDECCALKDGGWRLCVDYRSLNGITIKDTYPLPNITEVLNNTRDGVL 442
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+ IDL Q Y I + + + F V+Q L FGL +AP F +L + +
Sbjct: 443 FSKIDLLQGYHQIRVHEKDQSKTAFRTSFGVFQYIVLPFGLTNAPACFQRLMDSIF---- 498
Query: 412 ERGV---RCLVYLDDFLLASQ 429
+R V + LVYLDD L+ +
Sbjct: 499 QRHVIAKKLLVYLDDLLIKTN 519
>gi|147784911|emb|CAN77494.1| hypothetical protein VITISV_000775 [Vitis vinifera]
Length = 513
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 346 LQKNDYLATIDLSQAYCHIPI-ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L K + + +DL +Y + I AR + C G+ Y+ + FGL +AP F L N
Sbjct: 68 LSKASHFSKLDLRSSYLQVRIVARDEGKTTCVTRYGS-YEFLVMPFGLTNAPTTFCNLLN 126
Query: 405 WVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
V VYLD F++ D +V+ NQ
Sbjct: 127 DV----------LFVYLDAFVVVYLDDIVVYNQ 149
>gi|108708200|gb|ABF95995.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 922 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 981
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 982 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1028
>gi|38347567|emb|CAE05000.2| OSJNBb0093G06.8 [Oryza sativa Japonica Group]
Length = 1770
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 888 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 947
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 948 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 994
>gi|32489198|emb|CAE04383.1| OSJNBa0027G07.25 [Oryza sativa Japonica Group]
gi|38347092|emb|CAE02564.2| OSJNBa0006M15.7 [Oryza sativa Japonica Group]
Length = 1807
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 944 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1003
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1004 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1050
>gi|22857586|gb|AAN09860.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 938 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 997
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 998 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1044
>gi|110288765|gb|ABG65969.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1502
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 620 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 679
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 680 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 726
>gi|427781085|gb|JAA55994.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1119
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y ++IDL Y I + R F+ +YQ + FGL +AP F ++ + ++L
Sbjct: 348 YFSSIDLRSGYWQIAVDPMDREKTAFVTPDGLYQFKVMPFGLCNAPATFERMMD--SLLH 405
Query: 411 RERGVRCLVYLDDFLL------ASQDSVVLKNQIFQTLPVNLSGNCSRSGRR 456
+ CL YLDD ++ A + + +F+ + L+ + R GRR
Sbjct: 406 GFKWSTCLCYLDDVIVFAPTFEAHLERLSKILDVFRLAGLQLNSSKCRFGRR 457
>gi|78708035|gb|ABB47010.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1796
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 914 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 973
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 974 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1020
>gi|301605640|ref|XP_002932454.1| PREDICTED: hypothetical protein LOC100489243 [Xenopus (Silurana)
tropicalis]
Length = 1152
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+A D+ A+ +P+ R L + G Y CL G + + F S ++ ++R
Sbjct: 772 MAKADVESAFRLLPVHRESLHLLGCFFHGKYYVDRCLPMGCSISCAYFEAFSTFIEWVVR 831
Query: 412 ER-GVRCLV-YLDDFLLASQDSVVLKNQIFQTL 442
R GV ++ YLDDFL + + L + QTL
Sbjct: 832 RRAGVNTIIHYLDDFLCVAPGNSGLCAVLLQTL 864
>gi|50300545|gb|AAT73686.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1498
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 616 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 675
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 676 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 722
>gi|425770762|gb|EKV09226.1| hypothetical protein PDIG_63590 [Penicillium digitatum PHI26]
Length = 1596
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 13/168 (7%)
Query: 611 RPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCF 670
R V +L+ LN V + + I L Q Y++ +D ++ + + R HR +C
Sbjct: 633 RAVVDLRPLNKVVQRDIYPIPTIDDIVLLTQGKQYISVLDAAKFFYQWRVRRDHRDRICV 692
Query: 671 LIPMDMSSFRPSLSSPGVCPTIKLGRR-----LRERGVRCLVYLDDFLLASQDPIVLKNQ 725
+ F ++ G C ++ +R L+E C YLDD ++AS +
Sbjct: 693 VSHRGQEMFHVAVM--GFCNSVPYVQRQMDLLLKEFADFCRAYLDDIVVASDAFHLHIEH 750
Query: 726 ILQTLQLLTYLGWQVNLKKSQI------IPSHRVDYLGISWDTDLLQV 767
+ L +L + KK+ I + RVD LG++ D ++
Sbjct: 751 LSLVLGVLEKHSVSLEPKKAYIAFPEVSLLGQRVDALGMTTPEDKIKA 798
>gi|173477|gb|AAA35339.1| Tf1 protein [Schizosaccharomyces pombe]
Length = 1330
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L ++ + K LN YV + L +++ +Q + +DL AY I + + L
Sbjct: 459 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 518
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F V++ + +G+++AP F N + +E V C Y+DD L+ S+
Sbjct: 519 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDILIHSK 570
>gi|78708125|gb|ABB47100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 939 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 998
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 999 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1045
>gi|391335687|ref|XP_003742221.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 540
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 325 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQ 384
LN + + L + I L + + IDLS+AY +P+ + L +++
Sbjct: 314 LNEIIEDDNYPLPTAEDIFSGLSNGRFFSKIDLSEAYLQVPVEAGSQSILTINTPKGLFK 373
Query: 385 RTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
L FG+ +AP F +L + + L + YLDD +++S V + ++ Q
Sbjct: 374 MKRLPFGIKTAPSIFQRLMDSLVSDL----PGTVAYLDDIMVSSGTKVEHEQRVIQ 425
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 619 LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLIPMDMSS 678
LN + + L + I L + + IDLS+AY +P+ + L P +
Sbjct: 314 LNEIIEDDNYPLPTAEDIFSGLSNGRFFSKIDLSEAYLQVPVEAGSQSILTINTPKGL-- 371
Query: 679 FRPSLSSPGVCPTIKLGRRLRERGVRCL----VYLDDFLLASQDPIVLKNQILQTLQLLT 734
F+ G+ + +RL + V L YLDD +++S + + +++Q + L
Sbjct: 372 FKMKRLPFGIKTAPSIFQRLMDSLVSDLPGTVAYLDDIMVSSGTKVEHEQRVIQLFKRLN 431
Query: 735 YLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPV-DKIPPLRDR------LQTQALI 787
+ L K + + +LG ++ + R P D+I P+ D QT+A +
Sbjct: 432 DFNLTIRLDKCSFLKDE-IRFLGFILNS---KGRKPDPDRIQPILDMKRPENVAQTRAFL 487
Query: 788 ELKWFYHNL 796
+ FY+N
Sbjct: 488 GMLTFYNNF 496
>gi|108708180|gb|ABF95975.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 320
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 168 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLCSGYHQLRIREEDIPKTAFTMRY 227
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 228 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQ 274
>gi|38568042|emb|CAE05353.3| OSJNBa0065J03.12 [Oryza sativa Japonica Group]
Length = 1599
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 844 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 903
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 904 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 950
>gi|147841216|emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
Length = 1852
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 144/399 (36%), Gaps = 80/399 (20%)
Query: 586 FPPPPLLQVLHHLNDAQGLY--------------------GDGTMRPVFNLKSLNSYVTT 625
F PPL ++ HH+ +G D T R + ++LN+
Sbjct: 445 FKLPPLREIDHHIPLKEGTQPINVRPYRYAYFQKAEIEKQKDDTWRFCTDYRALNAATIK 504
Query: 626 KKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIA---------RRHRRFLCFLI-PMD 675
+F + + L Y +DL Y + + R H +L+ P
Sbjct: 505 DRFPIPTVDDMLDELYGATYFTKLDLRAGYHQVRVHAPDIPKTAFRTHNGHFEYLVMPF- 563
Query: 676 MSSFRPSLSSPGVCPTIKLGRRLRERGVR------CLVYLDDFLLASQDPIVLKNQILQT 729
G+C T + + R LV+ DD L+ S + N + +T
Sbjct: 564 -----------GLCNTPSTFQAIMNSIFRPYLRKFILVFFDDILVYSPTWELHLNHVRKT 612
Query: 730 LQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRDRLQTQALIEL 789
L++L + V K ++YLG ++V + PL + L+
Sbjct: 613 LEILKKHSFFVKATKCDF-GKQELEYLGHIVTNHGVKVDVLAR---PLTNLLKKG---NF 665
Query: 790 KWFYHNLTGFTPLHPPVPRT------------FMSTDASDVGWGAMVGNVSVQGVWTQ-- 835
KW FT L + T + TDAS G GA++ +
Sbjct: 666 KWDEDVAAAFTMLKQALTTTPTLAMPNFNEPFTIETDASGDGIGAVLTQQGRPIAYMSRA 725
Query: 836 ---AQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 892
+RSW I KE+ + AI + + +++D +++ ++ ++ +
Sbjct: 726 LGVTKRSWSIYAKEMLAIVEAIRTWRPYILGQKFFIRTDQRSLKYFLEQR------VATS 779
Query: 893 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP 931
E +K + + + I+ + PGK NS ADALSR+ P
Sbjct: 780 EQQKWVAKLLGYDYEII--YRPGKENSAADALSRRPNSP 816
>gi|116317844|emb|CAH65877.1| OSIGBa0160I04.3 [Oryza sativa Indica Group]
Length = 1786
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 904 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 963
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 964 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1010
>gi|108708189|gb|ABF95984.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 922 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 981
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 982 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1028
>gi|54287528|gb|AAV31272.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287632|gb|AAV31376.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1784
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 902 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 961
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 962 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1008
>gi|57834136|emb|CAE05577.3| OSJNBa0032N05.5 [Oryza sativa Japonica Group]
Length = 1790
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 908 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 967
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 968 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1014
>gi|21743214|emb|CAD40069.1| OSJNBa0085C10.22 [Oryza sativa Japonica Group]
Length = 1639
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 816 DYRALNEVTIKNKYPLPRIDDLFDQLKSATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 875
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 876 GLYEFTVMSFGLTNAPSFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQ 922
>gi|119657151|gb|ABL86705.1| putative pol protein [Adineta vaga]
Length = 1302
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
+ + LN+ T F + I L + Y TID Y + + R R F +
Sbjct: 433 IDYRKLNAITTKDAFPIPRIDDIFDHLSQAGYYTTIDFKSGYFQVGLDARDRPKTAFSTR 492
Query: 380 GTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
YQ T L G+ + P AF ++ + +L R L YLDD ++ S
Sbjct: 493 DQHYQFTVLPQGVTNGPPAFQRIVS--QILGPTRWKYALAYLDDVIIYS 539
>gi|119657139|gb|ABL86696.1| putative pol protein [Adineta vaga]
gi|119657143|gb|ABL86699.1| putative pol protein [Adineta vaga]
Length = 1302
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN+ T F + I L + Y TID Y + + R R F +
Sbjct: 434 DYRKLNAITTKDAFPIPRIDDIFDHLSQAGYYTTIDFKSGYFQVGLDARDRPKTAFSTRD 493
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
YQ T L G+ + P AF ++ + +L R L YLDD ++ S
Sbjct: 494 QHYQFTVLPQGVTNGPPAFQRIVS--QILGPTRWKYALAYLDDVIIYS 539
>gi|301624976|ref|XP_002941774.1| PREDICTED: hypothetical protein LOC100488583 [Xenopus (Silurana)
tropicalis]
Length = 825
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 69 ASDVGWGAMVGNVSVQGVW----TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 124
AS VG+GA N G W +A + ++ L E F + +I ++N +++
Sbjct: 680 ASTVGFGAFFQNQWSVGTWPTKWIEAGLTKNMVLLEFFPILVSIEIWGLELSNKKIIVNC 739
Query: 125 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 184
DN V+ I S +L ++ +L NI + IPG N ADALSR
Sbjct: 740 DNLGVVQVINNMSS-SSPPVLNLLRQFVLRALSRNIMVKERHIPGIYNKTADALSRLQFQ 798
Query: 185 PDWHL 189
W L
Sbjct: 799 IFWEL 803
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 815 ASDVGWGAMVGNVSVQGVW----TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQS 870
AS VG+GA N G W +A + ++ L E F + +I ++N +++
Sbjct: 680 ASTVGFGAFFQNQWSVGTWPTKWIEAGLTKNMVLLEFFPILVSIEIWGLELSNKKIIVNC 739
Query: 871 DNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALI 930
DN V+ I S +L ++ +L NI + IPG N ADALSR
Sbjct: 740 DNLGVVQVINNMSS-SSPPVLNLLRQFVLRALSRNIMVKERHIPGIYNKTADALSRLQFQ 798
Query: 931 PDWHL 935
W L
Sbjct: 799 IFWEL 803
>gi|270015520|gb|EFA11968.1| hypothetical protein TcasGA2_TC004049 [Tribolium castaneum]
Length = 1585
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 350 DYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVL 409
++ T+DL Y +P++ F+ + Y+ + FGL +AP F +L N V
Sbjct: 915 EFFTTLDLFSGYYQVPMSPESIPLTAFVTQDGHYEFLRMPFGLTNAPAVFMRLINNVLGQ 974
Query: 410 LRERGVRCLVYLDDFLLAS---QDSVVLKNQIFQTLPVN 445
LR V C Y+DD L+ + ++S+ + ++ VN
Sbjct: 975 LRFTKVLC--YMDDVLIPAKTIEESLSILEEVLSLFRVN 1011
>gi|40786567|gb|AAR89842.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1789
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 978 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1037
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1038 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1084
>gi|77555643|gb|ABA98439.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 895 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 954
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 955 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1001
>gi|22725899|gb|AAN04909.1| Putative polyprotein [Oryza sativa Japonica Group]
Length = 1024
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 176 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRICEEDIPKTAFTTRY 235
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 236 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 282
>gi|427780451|gb|JAA55677.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1151
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y +++DL Y IP+ + + F+ +++ + FGL +AP F + +
Sbjct: 379 LSSASYFSSVDLRSGYWQIPMHKEDKEKTAFVTPDGLFEFNVMPFGLCNAPATFERFMDN 438
Query: 406 VAVLLRERGVR---CLVYLDDFLL 426
+ RG++ C+ YLDD ++
Sbjct: 439 IL-----RGLKWEVCMCYLDDVVI 457
>gi|19114259|ref|NP_593347.1| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|19115068|ref|NP_594156.1| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|63054539|ref|NP_593385.2| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|162312209|ref|NP_001018800.2| retrotransposable element [Schizosaccharomyces pombe 972h-]
gi|1710054|sp|Q05654.1|RTF21_SCHPO RecName: Full=Retrotransposable element Tf2 155 kDa protein type 1
gi|1177360|emb|CAA93236.1| retrotransposable element [Schizosaccharomyces pombe]
gi|4760340|emb|CAB42363.1| retrotransposable element [Schizosaccharomyces pombe]
gi|6014423|emb|CAB57422.1| retrotransposable element [Schizosaccharomyces pombe]
gi|159883930|emb|CAB58169.2| retrotransposable element [Schizosaccharomyces pombe]
Length = 1333
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L ++ + K LN YV + L +++ +Q + +DL AY I + + L
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F V++ + +G+++AP F N + +E V C Y+DD L+ S+
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDILIHSK 573
>gi|301620344|ref|XP_002939539.1| PREDICTED: hypothetical protein LOC100497597 [Xenopus (Silurana)
tropicalis]
Length = 1152
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+A D+ A+ +P+ R L + G Y CL G + + F S ++ ++R
Sbjct: 772 MAKADVESAFRLLPVHRESLHLLGCFFHGKYYVDRCLPMGCSISCAYFEAFSTFIEWVVR 831
Query: 412 ER-GVRCLV-YLDDFLLASQDSVVLKNQIFQTL 442
R GV ++ YLDDFL + + L + QTL
Sbjct: 832 RRAGVNTIIHYLDDFLCVAPGNSGLCAVLLQTL 864
>gi|50552978|ref|XP_503899.1| YALI0E13376p [Yarrowia lipolytica]
gi|49649768|emb|CAG79492.1| YALI0E13376p [Yarrowia lipolytica CLIB122]
Length = 2621
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 65 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 111
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 112 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 171
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 172 NSLADALSRQAL 183
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 811 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 857
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 858 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 917
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 918 NSLADALSRQAL 929
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
>gi|50546082|ref|XP_500568.1| YALI0B06446p [Yarrowia lipolytica]
gi|49646434|emb|CAG82799.1| YALI0B06446p [Yarrowia lipolytica CLIB122]
Length = 2621
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 65 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 111
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 112 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 171
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 172 NSLADALSRQAL 183
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 811 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 857
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 858 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 917
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 918 NSLADALSRQAL 929
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
>gi|317419154|emb|CBN81191.1| Pol polyprotein [Dicentrarchus labrax]
Length = 1650
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
++ + + + + LNS F L ++ L + +T+DL+ Y +P+A +
Sbjct: 612 DSTIRLCVDYRLLNSKTRKDAFPLPRIEETLDALSGARWFSTLDLTSGYNQVPVAEPDKM 671
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F +++ + FGL +AP F +L + L + + L+YLDD ++ S
Sbjct: 672 KTAFCTPFGLFEFNRMPFGLCNAPSTFQRLMERIFGLHNHQSL--LLYLDDVIVFS 725
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 97/252 (38%), Gaps = 21/252 (8%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
D T+R + + LNS F L ++ L + +T+DL+ Y +P+A +
Sbjct: 612 DSTIRLCVDYRLLNSKTRKDAFPLPRIEETLDALSGARWFSTLDLTSGYNQVPVAEPDKM 671
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER--GVR----CLVYLDDFLLAS---Q 717
F P + F + G+C +RL ER G+ L+YLDD ++ S
Sbjct: 672 KTAFCTPFGLFEF--NRMPFGLCNAPSTFQRLMERIFGLHNHQSLLLYLDDVIVFSATVD 729
Query: 718 DPIVLKNQILQTLQ---LLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKI 774
+ I +L+TL+ L L LK H + G++ D D + V V
Sbjct: 730 EHIQRLGAVLETLRVQNLKAKLEKCCFLKTEVKYLGHVISKSGVATDPDKISV---VANW 786
Query: 775 PPLRDRLQTQALIELKWFYHNLT-GFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVW 833
P + + ++ + +Y GF L P+ R + +Q W
Sbjct: 787 QPPKTVTELRSFLGFASYYRRFVQGFASLAAPLHRLVAEMGGTKT---KKPSKRPLQESW 843
Query: 834 TQAQRSWHINLK 845
T+ + NLK
Sbjct: 844 TEQCETSFQNLK 855
>gi|189677275|ref|YP_001956722.2| Pol precursor [African green monkey simian foamy virus]
gi|110282986|sp|P27401.2|POL_SFV3L RecName: Full=Pro-Pol polyprotein; AltName: Full=Pr125Pol;
Contains: RecName: Full=Protease/Reverse
transcriptase/ribonuclease H; AltName:
Full=p87Pro-RT-RNaseH; Contains: RecName:
Full=Protease/Reverse transcriptase; AltName:
Full=p65Pro-RT; Contains: RecName: Full=Ribonuclease H;
Short=RNase H; Contains: RecName: Full=Integrase;
Short=IN; AltName: Full=p42In
Length = 1143
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 707 VYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD----- 761
VY+DD ++ DP Q+ + LL G+ V+LKKS+I H V++LG +
Sbjct: 311 VYVDDIYISHDDPREHLEQLEKVFSLLLNAGYVVSLKKSEIA-QHEVEFLGFNITKEGRG 369
Query: 762 -TDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVG 819
T+ + +L I P RD Q Q+++ L F N + F+ L P+ + + +
Sbjct: 370 LTETFKQKL--LNITPPRDLKQLQSILGLLNFARNFIPNFSELVKPLYNIIATANGKYIT 427
Query: 820 W 820
W
Sbjct: 428 W 428
>gi|13129460|gb|AAK13118.1|AC080019_10 Polyprotein [Oryza sativa Japonica Group]
Length = 1781
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 909 DYRALNEVTIKNKYPLPRIDDLFNQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 968
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 969 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1015
>gi|77555127|gb|ABA97923.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1758
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 910 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 969
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 970 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1016
>gi|50543554|ref|XP_499943.1| YALI0A10395p [Yarrowia lipolytica]
gi|47115360|emb|CAC34421.2| pol protein [Yarrowia lipolytica]
gi|49645808|emb|CAG83870.1| YALI0A10395p [Yarrowia lipolytica CLIB122]
Length = 2621
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 65 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 111
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 112 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 171
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 172 NSLADALSRQAL 183
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 811 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 857
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 858 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 917
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 918 NSLADALSRQAL 929
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
>gi|443689494|gb|ELT91868.1| hypothetical protein CAPTEDRAFT_188264 [Capitella teleta]
Length = 318
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 16/74 (21%)
Query: 700 ERGVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGIS 759
ER R L+Y DF++A LL LG +NL+KS + P + +LG
Sbjct: 236 ERSQRNLLYQRDFVMA----------------LLRNLGLLINLEKSNLHPKRQFTFLGFD 279
Query: 760 WDTDLLQVRLPVDK 773
WDTD V L +K
Sbjct: 280 WDTDCPSVGLTSEK 293
>gi|50543444|ref|XP_499888.1| YALI0A08932p [Yarrowia lipolytica]
gi|50543464|ref|XP_499898.1| YALI0A09317p [Yarrowia lipolytica]
gi|50551309|ref|XP_503128.1| YALI0D21846p [Yarrowia lipolytica]
gi|50552642|ref|XP_503731.1| YALI0E09350p [Yarrowia lipolytica]
gi|50554743|ref|XP_504780.1| YALI0E34606p [Yarrowia lipolytica]
gi|49168661|emb|CAE02703.1| polyprotein [Yarrowia lipolytica]
gi|49645753|emb|CAG83815.1| YALI0A08932p [Yarrowia lipolytica CLIB122]
gi|49645763|emb|CAG83825.1| YALI0A09317p [Yarrowia lipolytica CLIB122]
gi|49648996|emb|CAG81326.1| YALI0D21846p [Yarrowia lipolytica CLIB122]
gi|49649600|emb|CAG79321.1| YALI0E09350p [Yarrowia lipolytica CLIB122]
gi|49650649|emb|CAG80387.1| YALI0E34606p [Yarrowia lipolytica CLIB122]
Length = 2621
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 65 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 111
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 112 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 171
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 172 NSLADALSRQAL 183
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 811 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 857
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 858 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 917
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 918 NSLADALSRQAL 929
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
>gi|392718245|gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
Length = 1872
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 13/196 (6%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++FN K LN ++ L I + + DL + + +A + F
Sbjct: 1394 MVFNYKRLNDNTEKDQYSLPGIHTILKRVGNKKIFSKFDLKSGFHQVAMAEESIPWTAFW 1453
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQ 437
+Y+ + FGL +AP F + + V + VY+DD L+ S+ +N
Sbjct: 1454 VPQGLYEWLAMPFGLKNAPAIFQRKMD---VCFKGTEDFIAVYIDDILVFSETMEEHENH 1510
Query: 438 IFQTLPVNLSGNCSRSGRRSHPTHSLVANHTV-----VLQSDNKTVITYIRKQVGLRSNA 492
I + L + C R G P +A + ++ + ++ K++ ++
Sbjct: 1511 ISRMLEI-----CKRHGLVLSPNKMSIAQEEIEFLGTIISKGRMKLQAHVIKKIVSKAQM 1565
Query: 493 LLAETKKLLLIMSKLN 508
L+ TK L + LN
Sbjct: 1566 ELSTTKGLRSFLGLLN 1581
>gi|78708468|gb|ABB47443.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1494
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 622 DYRALNEVTIKNKYPLPRIDDLFNQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 681
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 682 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 728
>gi|50554773|ref|XP_504795.1| YALI0E34980p [Yarrowia lipolytica]
gi|49650664|emb|CAG80402.1| YALI0E34980p [Yarrowia lipolytica CLIB122]
Length = 2621
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 65 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 111
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 112 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 171
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 172 NSLADALSRQAL 183
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 811 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 857
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 858 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 917
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 918 NSLADALSRQAL 929
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
>gi|388858468|emb|CCF48006.1| uncharacterized protein [Ustilago hordei]
Length = 1097
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 356 DLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAF---AQLSNWVAVLLRE 412
DL A+CH+ +A L F Y G Y L+FG +S+P F A+ +WV
Sbjct: 552 DLEDAFCHVVMAESDAYLLSFQYDGVCYCENALTFGGSSSPFLFNLVAEFLHWVVASCLP 611
Query: 413 RGVRCLVYLDD 423
YLDD
Sbjct: 612 NTWPVNHYLDD 622
>gi|270016159|gb|EFA12607.1| hypothetical protein TcasGA2_TC001847 [Tribolium castaneum]
Length = 975
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
F+ + LN + L +I L+ +++++DL +A+ IP++ + F +
Sbjct: 696 FDGRKLNEITKHDSYPLPRIDRILSLLRDAKFISSLDLRKAFWQIPLSEPSKEKTAFAVQ 755
Query: 380 GT-VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
G ++Q T + FGL ++ Q +L + A+ + + VYLDD ++ +
Sbjct: 756 GCGLFQFTVMPFGLQNSAQTQQRLMD--AIFRPQFEPKIFVYLDDLIIVT 803
>gi|449676779|ref|XP_004208704.1| PREDICTED: putative enzymatic polyprotein-like [Hydra
magnipapillata]
Length = 761
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 323 KSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTV 382
+++N Y ++L + + + +T+DL AY IPI + R+F F G +
Sbjct: 110 QTINKYTQLDAYQLSRIDDLVNKIAQYKIFSTVDLKSAYHQIPITKNDRKFTAFEANGRL 169
Query: 383 YQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Q + FG+ + F + N + +E + YLD+ + +
Sbjct: 170 FQFKRMPFGIENGVACFQRTIN--EFIKKEGLLDTYAYLDNVTICGK 214
>gi|77551099|gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 897
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L + +++DL Y I + F Y+ +S+GL AP F L N
Sbjct: 214 LAGSSLFSSLDLRADYHQIRMRLEDEYKTAFKTHNGHYEFRVMSYGLTGAPATFQGLMNT 273
Query: 406 VAVLLRERGVRCLVYLDDFLLAS---QDSVVLKNQIFQTL 442
+ L +GV LV++DD L+ S +D V L Q+FQ L
Sbjct: 274 ILSPLLRKGV--LVFIDDILVYSSNLEDHVSLLKQVFQLL 311
>gi|50546072|ref|XP_500563.1| YALI0B06303p [Yarrowia lipolytica]
gi|49646429|emb|CAG82794.1| YALI0B06303p [Yarrowia lipolytica CLIB122]
Length = 2621
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 65 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 111
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 112 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 171
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 172 NSLADALSRQAL 183
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 811 MSTDASDVGWGAMVGN-VSV------------QGVWTQAQRSWHINLKELFTVRAAISSN 857
++TDAS +GWGA++ + VSV G+W +R++ E V+ A+
Sbjct: 1907 ITTDASSLGWGAVMSHIVSVGPPAARRPVRFESGLWNPTERTYASTKTECLAVKRALEKC 1966
Query: 858 PSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKC 917
V V+++DN+ ++ +++ +A+ + + + + + F+ G+
Sbjct: 1967 RHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFT---RWFAYIKQFDYEV--RFVKGRD 2021
Query: 918 NSLADALSRQAL 929
N +AD LSR+
Sbjct: 2022 NPVADWLSREKF 2033
>gi|40786831|gb|AAR89924.1| polymerase protein [Ross's goose hepatitis B virus]
Length = 783
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 441 SLDLSQAFYHLPLNPASSSRLAISDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 500
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L L LG ++N K+ P + +LG
Sbjct: 501 FNVWTFTYMDDFLLCHPNARHLNAISHAVCSFLQELGVRINFDKTTPSPVTEIKFLGYLI 560
Query: 761 DTDLLQV 767
D +++
Sbjct: 561 DDKYMKI 567
>gi|119657135|gb|ABL86693.1| putative pol protein [Adineta vaga]
Length = 1302
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN+ T F + I L + Y TID Y + + R R F +
Sbjct: 434 DYRKLNAITTKDAFPIPRIDDIFDHLSQAGYYTTIDFKSGYFQVGLDARDRPKTAFSTRD 493
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
YQ T L G+ + P AF ++ + +L R L YLDD ++ S
Sbjct: 494 QHYQFTVLPQGVTNGPPAFQRIVS--QILGPTRWKYALAYLDDVIIYS 539
>gi|108708196|gb|ABF95991.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1748
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 866 DYRALNEVTIKNKYPLPRIDDLFDQLKGATIFSKIDLRSGYHQLRIREEDIPKTAFTTRY 925
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 926 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 972
>gi|44829149|gb|AAS47828.1| polyprotein [Duck hepatitis B virus]
Length = 788
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLLTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQI 565
Query: 761 DTDLLQV 767
D ++
Sbjct: 566 DQKYTKI 572
>gi|22711560|gb|AAM01170.2|AC113336_22 Putative retroelement [Oryza sativa Japonica Group]
gi|78707947|gb|ABB46922.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 591
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 48 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 107
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
VY+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 108 GVYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 154
>gi|147795110|emb|CAN60854.1| hypothetical protein VITISV_030626 [Vitis vinifera]
Length = 1145
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ N K LN + ++ + N + + L K+ + D+ + I IA + R F+
Sbjct: 597 LVINYKPLNDVLRWIRYPIPNKKDLLQRLVKSKVFSKFDMKSGFWQIQIAEKDRYKTTFV 656
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
Y+ + FGL +AP F + N + + +VY+DD L+ S DSV
Sbjct: 657 VPFGHYEWNVMLFGLKNAPSEFQNIMNEI---FNQFSDFIIVYIDDVLINS-DSV 707
>gi|315360731|gb|ADU05359.1| polymerase [Duck hepatitis B virus]
Length = 786
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQWVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 563
Query: 761 DTDLLQV 767
D +++
Sbjct: 564 DEHFMKI 570
>gi|301609896|ref|XP_002934494.1| PREDICTED: hypothetical protein LOC100486224 [Xenopus (Silurana)
tropicalis]
Length = 1709
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 61 PRTFMSTDASDV-GWGA-MVGNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLV 115
P + TDA+ G+GA G G W + ++ ELF + A+ +
Sbjct: 1068 PDISLFTDAAGATGFGAYFAGKWCAAGWPKEWATGNLTGNLAFLELFPIIVAVELWGKEL 1127
Query: 116 ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLA 175
+N TV+ +SDN + + S +LA + L+L +LNI IPG+ N +A
Sbjct: 1128 SNKTVLFRSDNMAAVLAVNNLTS-SSRPVLALLRHLVLRCLQLNITFRAKHIPGEINDIA 1186
Query: 176 DALSR 180
DALSR
Sbjct: 1187 DALSR 1191
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 807 PRTFMSTDASDV-GWGA-MVGNVSVQG---VWTQAQRSWHINLKELFTVRAAISSNPSLV 861
P + TDA+ G+GA G G W + ++ ELF + A+ +
Sbjct: 1068 PDISLFTDAAGATGFGAYFAGKWCAAGWPKEWATGNLTGNLAFLELFPIIVAVELWGKEL 1127
Query: 862 ANHTVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLA 921
+N TV+ +SDN + + S +LA + L+L +LNI IPG+ N +A
Sbjct: 1128 SNKTVLFRSDNMAAVLAVNNLTS-SSRPVLALLRHLVLRCLQLNITFRAKHIPGEINDIA 1186
Query: 922 DALSR 926
DALSR
Sbjct: 1187 DALSR 1191
>gi|172044504|sp|P0C691.1|DPOL_DHBV3 RecName: Full=Protein P; Includes: RecName: Full=DNA-directed DNA
polymerase; Includes: RecName: Full=RNA-directed DNA
polymerase; Includes: RecName: Full=Ribonuclease H
Length = 786
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 444 SLDLSQAFYHLPLNPASSSRLAVSDGQWVYYFRKAPMGVGLSPFLLHLFTTALGSEISRR 503
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 504 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTEIRFLGYQI 563
Query: 761 DTDLLQV 767
D +++
Sbjct: 564 DEHFMKI 570
>gi|156045233|ref|XP_001589172.1| hypothetical protein SS1G_09805 [Sclerotinia sclerotiorum 1980]
gi|154694200|gb|EDN93938.1| hypothetical protein SS1G_09805 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1492
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 705 CLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDL 764
C YLDD L+ S+DP + + LQ L G Q +LKKS+ + + +YLG T
Sbjct: 858 CTAYLDDILIYSEDPSEHDTHVRKVLQRLRDAGLQADLKKSEFDVT-KTNYLGFIISTTG 916
Query: 765 LQV 767
++V
Sbjct: 917 IEV 919
>gi|108862184|gb|ABA96442.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1539
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
N ++LN + K+ L + L+ + IDL Y + I F +
Sbjct: 691 NYRALNEVIIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 750
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+++ T +SFGL +AP F L N V + ++ V +V++DD L+ S+
Sbjct: 751 GLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFV--VVFIDDILIYSK 797
>gi|32490114|emb|CAE04950.1| OSJNBa0070D17.1 [Oryza sativa Japonica Group]
gi|38347250|emb|CAD39363.2| OSJNBa0059H15.14 [Oryza sativa Japonica Group]
Length = 1030
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 178 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 237
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 238 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 284
>gi|74641|pir||GNLJLK pol polyprotein - simian foamy virus (type 3, strain LK3)
gi|334872|gb|AAA47796.1| pol polyprotein, partial [Simian foamy virus 3]
Length = 1157
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 707 VYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD----- 761
VY+DD ++ DP Q+ + LL G+ V+LKKS+I H V++LG +
Sbjct: 325 VYVDDIYISHDDPREHLEQLEKVFSLLLNAGYVVSLKKSEIA-QHEVEFLGFNITKEGRG 383
Query: 762 -TDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVG 819
T+ + +L I P RD Q Q+++ L F N + F+ L P+ + + +
Sbjct: 384 LTETFKQKL--LNITPPRDLKQLQSILGLLNFARNFIPNFSELVKPLYNIIATANGKYIT 441
Query: 820 W 820
W
Sbjct: 442 W 442
>gi|77554522|gb|ABA97318.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1398
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 540 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 599
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 600 GLYEFTVMSFGLTNAPAFFMNLMNKVFMKYLDKFV--VVFIDDILVYSQ 646
>gi|242075268|ref|XP_002447570.1| hypothetical protein SORBIDRAFT_06g004067 [Sorghum bicolor]
gi|241938753|gb|EES11898.1| hypothetical protein SORBIDRAFT_06g004067 [Sorghum bicolor]
Length = 908
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ +SLN K+ L + L+ + IDL Y + I + F +
Sbjct: 492 DYRSLNEVTIKNKYPLPRIDDLFDQLRGACVFSKIDLRSGYHQLKIRNLYIPKTTFTTRY 551
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F + N V + ++ V +V++DDFL+ S+
Sbjct: 552 GLYEYTVMSFGLTNAPAYFMYMMNKVFMEYLDKFV--VVFIDDFLVFSK 598
>gi|301626497|ref|XP_002942427.1| PREDICTED: hypothetical protein LOC100490112 [Xenopus (Silurana)
tropicalis]
Length = 512
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 64 FMSTDASDVGWGAMVGNVSVQGVW----TQAQRSWHINLKELFTVRAAISSNPSLVANHT 119
F + A VG+GA G W + + + ++ L ELF + ++ + + N +
Sbjct: 365 FHTDAAGSVGFGAYFAGRWCAGTWPNKWVEQKLTSNLTLLELFPIIVSVELWGTQLENQS 424
Query: 120 VVLQSDNKTVIAYIRK-QGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 178
VV +DN +V+ I G R +L + L + +LN+ +PG N +AD+L
Sbjct: 425 VVFYTDNMSVVMAINNLTSGSRPVLVLLKHLVLRCL--QLNVRFRAKHVPGYTNEIADSL 482
Query: 179 SR 180
SR
Sbjct: 483 SR 484
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 810 FMSTDASDVGWGAMVGNVSVQGVW----TQAQRSWHINLKELFTVRAAISSNPSLVANHT 865
F + A VG+GA G W + + + ++ L ELF + ++ + + N +
Sbjct: 365 FHTDAAGSVGFGAYFAGRWCAGTWPNKWVEQKLTSNLTLLELFPIIVSVELWGTQLENQS 424
Query: 866 VVLQSDNKTVIAYIRK-QGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
VV +DN +V+ I G R +L + L + +LN+ +PG N +AD+L
Sbjct: 425 VVFYTDNMSVVMAINNLTSGSRPVLVLLKHLVLRCL--QLNVRFRAKHVPGYTNEIADSL 482
Query: 925 SR 926
SR
Sbjct: 483 SR 484
>gi|301603744|ref|XP_002931543.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like, partial [Xenopus (Silurana) tropicalis]
Length = 749
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 16/180 (8%)
Query: 277 GNSPPNNGSRPQIASDRSS-NGLLSGN-DRGHDIGNLANTGLSIMF------NLKSLNSY 328
G PP + P ++ ++ +S N RG + + G F L+ Y
Sbjct: 34 GTMPPRGRTYPLSPAETAAMKEYISENLQRGFIRPSTSPAGAGFFFVEKKDGGLRPCIDY 93
Query: 329 VTTKKFKLINHQKIPLFLQKNDYL------ATIDLSQAYCHIPIARRHRRFLCFLYKGTV 382
K + N +PL + D L + +DL AY I I F +
Sbjct: 94 RGLNKITVKNRYPLPLISELFDQLKGAKIFSKLDLRGAYNLIRIRGGDEWKTAFNTRDGH 153
Query: 383 YQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTL 442
Y+ + FGL +AP F + N + L + V +VYLDD L+ SQD ++Q+ + L
Sbjct: 154 YEYLVMPFGLCNAPAVFQEFVNDIFRDLLGKSV--VVYLDDILIFSQDLETHRSQVKEAL 211
>gi|432854449|ref|XP_004067907.1| PREDICTED: uncharacterized protein LOC101171652 [Oryzias latipes]
Length = 687
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+T+DL Y I + + R+ F+ + +Y+ T + FGL +AP F + AV L
Sbjct: 32 FSTLDLQSGYWQITMNGKDRQKTAFITRWGLYEYTRMPFGLCNAPSTFQR-----AVELV 86
Query: 412 ERGVR---CLVYLDDFLLASQ---DSVVLKNQIFQTL 442
RG++ L+YLDD ++ + +S+ Q+F+ L
Sbjct: 87 LRGLQWETLLIYLDDIIVLGRGVDESLDRLAQVFKCL 123
>gi|2801486|gb|AAC82578.1| Pr125 [Human spumaretrovirus]
Length = 556
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 16/225 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG R V + + +N + + + I + + Y T+DL+ + PI
Sbjct: 12 DGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPESYW 71
Query: 667 FLCFLIPMDMSSF----RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
F + + L+SP + T + L+E VY+DD L+ DP
Sbjct: 72 LTAFTWQGKQYCWTRLPQGFLNSPALF-TADVVDLLKEIP-NVQVYVDDIYLSHDDPKEH 129
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------TDLLQVRLPVDKIPP 776
Q+ + Q+L G+ V+LKKS+ I V++LG + TD + +L I P
Sbjct: 130 VQQLEKVFQILLQAGYVVSLKKSE-IGQKTVEFLGFNITKEGRGLTDTFKTKL--LNITP 186
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGW 820
+D Q Q+++ L F N + F L P+ S + W
Sbjct: 187 PKDLKQLQSILGLLNFARNFIPNFAELVQPLYNLIASAKGKYIEW 231
>gi|388854961|emb|CCF51464.1| uncharacterized protein [Ustilago hordei]
Length = 1516
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ L + + + LN ++ L ++ L K + IDL AY + IA+
Sbjct: 614 DGSLRLCVDYRGLNQITIRNRYPLPLIDELLDRLCKARFFTRIDLRGAYNLLRIAKGDEW 673
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
F + ++Q + FGL +AP +F L N + +R + ++YLDD L+ S
Sbjct: 674 KTAFCTRYGLFQYNVMPFGLTNAPASFQHLMNDTFKDMLDRSL--IIYLDDLLIYS 727
>gi|427781087|gb|JAA55995.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1114
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y +++DL Y I + R R F+ +YQ + FGL +AP F ++ +
Sbjct: 341 LHGAKYFSSLDLRSGYWQISVDDRDREKTAFVTPDGLYQFKVMPFGLCNAPATFERMMD- 399
Query: 406 VAVLLRERGVRCLVYLDDFLLAS 428
++L + CL YL+D + S
Sbjct: 400 -SLLRGFKWSTCLCYLNDVTVFS 421
>gi|50838927|gb|AAT81688.1| putative retrotransposon protein [Oryza sativa Japonica Group]
Length = 1278
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 745 DYRALNEVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 804
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 805 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQ 851
>gi|301631707|ref|XP_002944937.1| PREDICTED: hypothetical protein LOC100495730 [Xenopus (Silurana)
tropicalis]
Length = 761
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 67 TDAS-DVGWGAMVGNVSVQGVWTQAQRSW-------HINLKELFTVRAAISSNPSLVANH 118
TDAS VG+GA +G W + W ++ ELF + A+ + +AN
Sbjct: 609 TDASGSVGFGAYMGGSWCAAYWPE---EWLQVDVIKNLCFLELFPIVVAVFLWGTQLANK 665
Query: 119 TVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 178
VV + DN + + KQ + +L + K+N+ + +PG N +ADAL
Sbjct: 666 RVVFRCDNLGAVQALNKQSATSPEVVRLLRVLVLQCL-KINLCFIAVHVPGVANVVADAL 724
Query: 179 SR 180
SR
Sbjct: 725 SR 726
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 813 TDAS-DVGWGAMVGNVSVQGVWTQAQRSW-------HINLKELFTVRAAISSNPSLVANH 864
TDAS VG+GA +G W + W ++ ELF + A+ + +AN
Sbjct: 609 TDASGSVGFGAYMGGSWCAAYWPE---EWLQVDVIKNLCFLELFPIVVAVFLWGTQLANK 665
Query: 865 TVVLQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
VV + DN + + KQ + +L + K+N+ + +PG N +ADAL
Sbjct: 666 RVVFRCDNLGAVQALNKQSATSPEVVRLLRVLVLQCL-KINLCFIAVHVPGVANVVADAL 724
Query: 925 SR 926
SR
Sbjct: 725 SR 726
>gi|301627834|ref|XP_002943073.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Xenopus (Silurana) tropicalis]
Length = 1474
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 95/242 (39%), Gaps = 35/242 (14%)
Query: 201 WGIESCAALCDPESPGQQGGIHRCLLKKVGFQASVGLPAPASTSSSIASLERRPGLICNS 260
WG + C +LC + ++ V + GLP+P S + + S + L +
Sbjct: 117 WGTD-CQSLC------------KKPVQVVAATSLQGLPSPYSPFADVFSKKAAEALPPHR 163
Query: 261 SSSVAEGLLVSRLEGAGNSPPNNGSRP-QIASDRSSNGLLSGN-DRGHDIGNLANTGLSI 318
A L+ G+SPP + P + ++ + N +RG + + G
Sbjct: 164 PYDCAIELI------PGSSPPRGRTYPLSLPETQAMEEYIKENLERGFIRPSTSPAGAGF 217
Query: 319 MF------NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYL--ATI----DLSQAYCHIPI 366
F L+ Y K + N +PL + D + ATI DL AY I I
Sbjct: 218 FFVEKKDGGLRPCIDYRGLNKITVKNRYPLPLISELFDRVKGATIFSKLDLRGAYNLIRI 277
Query: 367 ARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
F + Y+ + FGL +AP F +L N + L R V +VYLDD L+
Sbjct: 278 REGDEWKTAFNTRDGHYEYLVMPFGLCNAPAVFQELVNDIFRDLLGRSV--VVYLDDILI 335
Query: 427 AS 428
S
Sbjct: 336 YS 337
>gi|294895329|ref|XP_002775136.1| gag/pol/env polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239881092|gb|EER06952.1| gag/pol/env polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 745
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 30/180 (16%)
Query: 32 LLTYLAQALIELKWFYHNLTGFTPLHPPVPR-TFMSTDASDVGWGAMVGNVSVQGVW--T 88
L+ ++ + + W + G P+ +P + +T+ D+ A G+W T
Sbjct: 87 LVCFVDASPVGYGWCIKVVNGTVPISDIIPELSKPNTEVWDLAEQA--------GIWLST 138
Query: 89 QAQRSWHINLKELFTVRAAISSNPSLVANH--------TVVLQSDNKTVIAYIRKQGGLR 140
+AQRSWHIN KEL + + ++ +H ++ + +D++T + ++ + G +
Sbjct: 139 KAQRSWHINRKELAAIGKLMLYLHGMLCSHRTIGPPISSIFVYADSQTALRWMENRVGAK 198
Query: 141 SHALLAETKKLLLIMSKL-------NIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSL 193
S +A ++L+ +++L I + + G N AD LSR L+ W L SL
Sbjct: 199 SIEKVA-VQRLVCCINELVSDIRASGITVTYGKVEGALNP-ADRLSR--LVEKWGLTASL 254
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 831 GVW--TQAQRSWHINLKELFTVRAAISSNPSLVANH--------TVVLQSDNKTVIAYIR 880
G+W T+AQRSWHIN KEL + + ++ +H ++ + +D++T + ++
Sbjct: 133 GIWLSTKAQRSWHINRKELAAIGKLMLYLHGMLCSHRTIGPPISSIFVYADSQTALRWME 192
Query: 881 KQGGLRSHALLAETKKLLLIMSKL-------NIHIVPYFIPGKCNSLADALSRQALIPDW 933
+ G +S +A ++L+ +++L I + + G N AD LSR L+ W
Sbjct: 193 NRVGAKSIEKVA-VQRLVCCINELVSDIRASGITVTYGKVEGALNP-ADRLSR--LVEKW 248
Query: 934 HLLPSL 939
L SL
Sbjct: 249 GLTASL 254
>gi|62734703|gb|AAX96812.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550092|gb|ABA92889.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1651
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 769 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 828
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 829 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 875
>gi|49035813|gb|AAT48677.1| pol protein [Oikopleura dioica]
Length = 1316
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G I +++SLN+ + K+ L + + L + + +D+ QA+ H+ + +
Sbjct: 484 GYRICVDMRSLNNRLAESKWPLPSLAETLESLAGTAFFSCVDIRQAFFHMALTDESKHLT 543
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F YQ L GL +P + Q++ L + G + +VYLDD L+ +
Sbjct: 544 AFSALNCQYQFRRLPMGLKISPSVY-QMA-MKETLGNDLGNKAVVYLDDVLVTGR 596
>gi|74640|pir||GNLJSP pol polyprotein - human foamy virus
Length = 886
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 26/288 (9%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG R V + + +N + + + I + + Y T+DL+ + PI
Sbjct: 12 DGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPESYW 71
Query: 667 FLCFLIPMDMSSF----RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
F + + L+SP + T + L+E VY+DD L+ DP
Sbjct: 72 LTAFTWQGKQYCWTRLPQGFLNSPALF-TADVVDLLKEIP-NVQVYVDDIYLSHDDPKEH 129
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------TDLLQVRLPVDKIPP 776
Q+ + Q+L G+ V+LKKS+ I V++LG + TD + +L I P
Sbjct: 130 VQQLEKVFQILLQAGYVVSLKKSE-IGQKTVEFLGFNITKEGRGLTDTFKTKL--LNITP 186
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVG---NVSVQGV 832
+D Q Q+++ L F N + F L P+ S + W N+ ++ +
Sbjct: 187 PKDLKQLQSILGLLNFARNFIPNFAELVQPLYNLIASAKGKYIEWSEENTKQLNMVIEAL 246
Query: 833 WTQAQRSWHINLKE-LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI 879
T + NL+E L R I N S A + K I Y+
Sbjct: 247 NTAS------NLEERLPEQRLVIKVNTSPSAGYVRYYNETGKKPIMYL 288
>gi|2343269|gb|AAC59310.1| pol polyprotein [Walleye epidermal hyperplasia virus 1]
Length = 1200
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLL 410
IDLS A+ +PI + F ++G Y T L G +P F+Q L + ++ +
Sbjct: 261 FTVIDLSNAFFSVPIHPDSQYLFAFTFEGRQYTWTVLPQGFIHSPTLFSQALFSSLSKIK 320
Query: 411 RERGVRCLVYLDDFLLASQDS 431
+Y+DD L+AS+D
Sbjct: 321 DSLTSEICIYMDDVLIASKDE 341
>gi|301609594|ref|XP_002934354.1| PREDICTED: olfactory receptor 6N2-like [Xenopus (Silurana)
tropicalis]
Length = 505
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 516 IPGKCNSLADALSRQALIPDWHLLPSLTESVFPRWGSRVVPLYVTRNPQDSKAAF----- 570
IPG N+ S+ P+W L + + RWG+ + L +R+ Q+ F
Sbjct: 372 IPGISNTKLPQ-SQSTRFPEWELHSDAFQDLTRRWGTPQIDLMASRSNQNVLKFFTHCRD 430
Query: 571 -----IDAFSRKWDFKLAWVFPPPPLL-QVLHHLNDA 601
I A ++ W F L +VFPP P+L QVL + +
Sbjct: 431 PLTTGIVAMTQHWRFDLVYVFPPLPMLPQVLKKIRQS 467
>gi|421807164|ref|ZP_16243025.1| hypothetical protein ACIN5035_3676 [Acinetobacter baumannii
OIFC035]
gi|410416806|gb|EKP68577.1| hypothetical protein ACIN5035_3676 [Acinetobacter baumannii
OIFC035]
Length = 271
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Query: 781 LQTQAL-IELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRS 839
LQTQ++ +EL+ P + P PR F+ST+ S G ++G+V +Q + S
Sbjct: 69 LQTQSIHLELE--------ILPANIP-PRNFISTNGSKQTVGVLIGSVDIQ------RFS 113
Query: 840 WHINLKELFTV-RAAISSNPSLVANHTVVLQSDNKTVIAYI 879
+ + KE+F + + ISS S + +H +V+ +N TV Y+
Sbjct: 114 KNNDKKEIFKISKEIISSGQSTLIDHEIVVVENNSTVSTYL 154
Score = 40.4 bits (93), Expect = 4.4, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 61 PRTFMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTV-RAAISSNPSLVANHT 119
PR F+ST+ S G ++G+V +Q + S + + KE+F + + ISS S + +H
Sbjct: 87 PRNFISTNGSKQTVGVLIGSVDIQ------RFSKNNDKKEIFKISKEIISSGQSTLIDHE 140
Query: 120 VVLQSDNKTVIAYI 133
+V+ +N TV Y+
Sbjct: 141 IVVVENNSTVSTYL 154
>gi|196019240|ref|XP_002118947.1| hypothetical protein TRIADDRAFT_9925 [Trichoplax adhaerens]
gi|190577594|gb|EDV18568.1| hypothetical protein TRIADDRAFT_9925 [Trichoplax adhaerens]
Length = 115
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN+ T + L + + ++ T+DLS+ Y IP+ +++ F
Sbjct: 28 DYRKLNACTTVNAYPLPRIDDLLDIVGNAKFITTLDLSKGYWQIPMEEGSKQYTAFTTPY 87
Query: 381 TVYQRTCLSFGLASAPQAFAQLSN 404
+Y+ + FGL +AP F L N
Sbjct: 88 GLYEFEMMPFGLHNAPATFQSLVN 111
>gi|2780499|dbj|BAA24352.1| Pol-like peptide [Alternaria alternata]
Length = 551
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L ++ + + LNS + ++ + + + L D++ +D+ + ++ +A +
Sbjct: 48 LRLVIDYRDLNSKIVLDEYPIPLSRTLMNDLAGADWITAMDVRSGFANLRMAPGSEKATA 107
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSV 432
F ++ T + GLA+AP F + N +VL G+ C YLDD ++ ++ S+
Sbjct: 108 FKTFFGSFEYTIMPMGLATAPSVFQRFIN--SVLNPYLGIFCHAYLDDVVIFTKGSL 162
>gi|427791163|gb|JAA61033.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1065
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y +++DL Y IP+ R F+ +++ + FGL +AP F + +
Sbjct: 298 LHSAAYFSSVDLRSGYWQIPMHPTDREKTAFVTPDGLFEFNVMPFGLCNAPATFERFMDS 357
Query: 406 VAVLLRERGVR---CLVYLDDFLL 426
+ RG++ C+ YLDD ++
Sbjct: 358 IL-----RGLKWETCMCYLDDVII 376
>gi|21743213|emb|CAD40068.1| OSJNBa0085C10.21 [Oryza sativa Japonica Group]
Length = 1825
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 943 DYRALNEVTIKNKYPLPRIDDLFDQLKVATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 1002
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 1003 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 1049
>gi|808677|gb|AAA66556.1| pol protein, partial [Human spumaretrovirus]
Length = 545
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 16/226 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG R V + + +N + + + I + + Y T+DL+ + PI
Sbjct: 12 DGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPESYW 71
Query: 667 FLCFLIPMDMSSF----RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
F + + L+SP + T + L+E VY+DD L+ DP
Sbjct: 72 LTAFTWQGKQYCWTRLPQGFLNSPALF-TADVVDLLKEIP-NVQVYVDDIYLSHDDPKEH 129
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------TDLLQVRLPVDKIPP 776
Q+ + Q+L G+ V+LKKS+ I V++LG + TD + +L I P
Sbjct: 130 VQQLEKVFQILLQAGYVVSLKKSE-IGQKTVEFLGFNITKEGRGLTDTFKTKL--LNITP 186
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWG 821
+D Q Q+++ L F N + F L P+ S + W
Sbjct: 187 PKDLKQLQSILGLLNFARNFIPNFAELVQPLYNLIASAKGKYIEWS 232
>gi|291192129|gb|ADD83128.1| reverse transcriptase [Cucumis hystrix]
Length = 143
Score = 41.6 bits (96), Expect = 2.2, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L + + LQ + IDL Y + I F +
Sbjct: 5 DYRELNKVTVKNKYPLPRIEDLFDQLQGATVFSKIDLHSGYHQLRIRDSDISKTAFRSRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ +SFGL +AP AF +L N V + + +V++DD L+ SQ + + Q
Sbjct: 65 GHYEFIVMSFGLTNAPAAFMELMNRVFKGFLD--ISVIVFIDDILVYSQTEAEHEEHLHQ 122
Query: 441 TL 442
L
Sbjct: 123 VL 124
>gi|108709816|gb|ABF97611.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1343
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 745 DYRALNEVTIKNKYPLPRIDDLFDQLKGASVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 804
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 805 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQ 851
>gi|294903335|ref|XP_002777513.1| hypothetical protein Pmar_PMAR003177 [Perkinsus marinus ATCC 50983]
gi|239885230|gb|EER09329.1| hypothetical protein Pmar_PMAR003177 [Perkinsus marinus ATCC 50983]
Length = 1962
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 49/172 (28%)
Query: 55 PLHPPVPRTFMSTDASDVGWGAMVGNVSVQG-----------------VWTQAQRSWHIN 97
P + +P + TDAS G G +V SV+G W++ QR++H N
Sbjct: 1061 PSNDELPDLTLVTDASRSGGGFLVLRGSVEGGSEAGLADLPMLCGDGFRWSRTQRNYHSN 1120
Query: 98 LKELFTVRAAISSNPSLVANH----------------TVVLQSDNKTVIAYIRKQG---- 137
+EL ++ + + LV+++ V + SDNK VI + R+
Sbjct: 1121 RRELLSLVIGLRACADLVSHYFTNSKDSTACGPRRRPKVFVLSDNKAVIHWSREDATALF 1180
Query: 138 ----GLRSHALLAETKKLLLIMSKLN-----IHIVPYFIPGKCNSLADALSR 180
L AL T+ +L+ M +L I + G+ N LAD LSR
Sbjct: 1181 SSGQALEKRAL---TRLVLVAMDELKALKRYADIEVRHVEGRNNILADRLSR 1229
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 49/172 (28%)
Query: 801 PLHPPVPRTFMSTDASDVGWGAMVGNVSVQG-----------------VWTQAQRSWHIN 843
P + +P + TDAS G G +V SV+G W++ QR++H N
Sbjct: 1061 PSNDELPDLTLVTDASRSGGGFLVLRGSVEGGSEAGLADLPMLCGDGFRWSRTQRNYHSN 1120
Query: 844 LKELFTVRAAISSNPSLVANH----------------TVVLQSDNKTVIAYIRKQG---- 883
+EL ++ + + LV+++ V + SDNK VI + R+
Sbjct: 1121 RRELLSLVIGLRACADLVSHYFTNSKDSTACGPRRRPKVFVLSDNKAVIHWSREDATALF 1180
Query: 884 ----GLRSHALLAETKKLLLIMSKLN-----IHIVPYFIPGKCNSLADALSR 926
L AL T+ +L+ M +L I + G+ N LAD LSR
Sbjct: 1181 SSGQALEKRAL---TRLVLVAMDELKALKRYADIEVRHVEGRNNILADRLSR 1229
>gi|45775510|gb|AAS77348.1| polyprotein [Duck hepatitis B virus]
Length = 788
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)
Query: 648 TIDLSQAYCHIPIARRHRRFLCFLIPMDMSSFRPSLSSPGVCP------TIKLGRRLRER 701
++DLSQA+ H+P+ L + FR + G+ P T LG + R
Sbjct: 446 SLDLSQAFYHLPLNPASSSRLAVSDGQHVYYFRKAPMGVGLSPFLLHLFTTALGSEIARR 505
Query: 702 -GVRCLVYLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISW 760
V Y+DDFLL + L + L LG ++N K+ P + +LG
Sbjct: 506 FNVWTFTYMDDFLLCHPNARHLNSISHAVCSFLQELGIRINFDKTTPSPVTDIRFLGNQI 565
Query: 761 DTDLLQV 767
D +++
Sbjct: 566 DEKYMKI 572
>gi|357614969|gb|EHJ69396.1| hypothetical protein KGM_03198 [Danaus plexippus]
Length = 457
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 41 IELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ 89
+EL+W+ + P+H TDASD+GWGA + + G W +
Sbjct: 404 LELRWWLKAIASTLPIHLGSVTHHAKTDASDIGWGAQIEETKLSGQWIE 452
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 787 IELKWFYHNLTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ 835
+EL+W+ + P+H TDASD+GWGA + + G W +
Sbjct: 404 LELRWWLKAIASTLPIHLGSVTHHAKTDASDIGWGAQIEETKLSGQWIE 452
>gi|91176527|gb|ABE26653.1| pol polyprotein [Nosema bombycis]
Length = 1238
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 316 LSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLC 375
L + + ++LN T K+ L +I L +T+D + Y I + ++
Sbjct: 518 LRMCIDYRALNKITTKDKYPLPRIDEILDRLAGARIFSTLDATSGYYQIGMNESDKQKTA 577
Query: 376 FLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRC----LVYLDDFLLASQ 429
F +KG +Y+ + FGL +AP F + + R G C + YLDD ++ S+
Sbjct: 578 FAWKGGLYEYNRMPFGLCNAPATFQR------AMDRLIGNPCNEFVIPYLDDIIIFSK 629
>gi|301606940|ref|XP_002933072.1| PREDICTED: uncharacterized protein K02A2.6-like, partial [Xenopus
(Silurana) tropicalis]
Length = 912
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 112/289 (38%), Gaps = 63/289 (21%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPS------HRVDYLGISWD 761
Y DD LL +L +++ + L G ++ +K +I + +R+D GI
Sbjct: 169 YFDDVLLMGPSESILADRLREVLSRFDSSGIRLKKEKCEIGATSVNFLGYRIDASGIRPT 228
Query: 762 TDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHNL-----TGFTPLH------------P 804
++ + P + + + QA + L FYH+ T PLH P
Sbjct: 229 ESKVKA---IHDAPEPKSKQELQAFLGLLNFYHSFLAHKATVAEPLHRLLDKGVPWNWTP 285
Query: 805 PVPRTF-----------------------MSTDASDVGWGAMVGNVSVQG---------- 831
F ++TDAS G GA++ ++ G
Sbjct: 286 KHSEAFCKVKQLLTSDSLLVHYDEDRPLILTTDASPYGVGAVLSHILPNGKEAPVAYYSR 345
Query: 832 VWTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALL 891
T A+R++ KE + A + + + HT + +D+K ++ + K + +
Sbjct: 346 TMTSAERNYAQIDKEALAIIAGVKKFHNYLYGHTFEIHTDHKPLLGLLSKDSPT-PNVMS 404
Query: 892 AETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQAL-IPDWHLLPSL 939
+ +++S + ++ + PGK ADALSR L IPD L P L
Sbjct: 405 PRMLRWSIMLSAYDYTLL--YKPGKSILNADALSRLPLQIPDCSLPPLL 451
>gi|270005480|gb|EFA01928.1| hypothetical protein TcasGA2_TC007542 [Tribolium castaneum]
Length = 1418
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
+ + + LNS +F L P + D L DL+ Y IP+A F+
Sbjct: 670 MCVDYRQLNSKTIKDRFPL------PRVDEHLDKLN--DLASGYYQIPMATESIPKTAFV 721
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGLA+AP F + N V LR + C Y+DD L+ S+D
Sbjct: 722 TPDGHYEFVRMPFGLANAPAVFQRAMNKVLGPLRFQTAFC--YIDDLLIPSKD 772
>gi|90265203|emb|CAH67719.1| H0613A10.2 [Oryza sativa Indica Group]
Length = 1809
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + ++LN K+ L + L+ + IDL Y + I F
Sbjct: 977 MVIDYRALNEVTIKNKYPLPRIDDLFNQLKGARVFSKIDLRSGYHQLKIRSEDIPKTAFS 1036
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
+ +Y+ T +SFGL +AP F L N + + +R V +V++DD L+ S++
Sbjct: 1037 TRYGLYEFTVMSFGLTNAPAFFINLMNKIFMEYLDRFV--VVFIDDILIYSKNE 1088
>gi|425856947|gb|AFX98094.1| pol protein [Simian foamy virus]
Length = 1141
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 16/226 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG R V + + +N + + + I + + Y T+DL+ + PI
Sbjct: 209 DGRWRMVLDYREVNKTIPLIAAQNQHSAGILATIVRKKYKTTLDLANGFWAHPITPESYW 268
Query: 667 FLCFLIPMDMSSF----RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
F + + L+SP + T + L+E Y+DD L+ DP
Sbjct: 269 LTAFTWQGKQYCWTRLPQGFLNSPALF-TADVVDLLKEIS-NVQAYVDDIYLSHDDPQEH 326
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------TDLLQVRLPVDKIPP 776
NQ+ + Q+L G+ V+LKKS+I V++LG + T+ + +L +D PP
Sbjct: 327 LNQLEKVFQILLQAGYVVSLKKSEIA-QKTVEFLGFNITKEGRGLTEAFKAKL-LDITPP 384
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWG 821
+D Q Q+++ L F N + F L P+ S + W
Sbjct: 385 -KDLKQLQSILGLLNFARNFILNFAELVKPLYSLISSAKGKYIEWS 429
>gi|291223453|ref|XP_002731724.1| PREDICTED: polyprotein-like [Saccoglossus kowalevskii]
Length = 945
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD 779
+ KN + + QLL+ LG +N IIP G S+ + LLQ+ V K+
Sbjct: 706 VTSKNTVTKR-QLLSLLG-HLNFATRVIIP-------GRSFLSHLLQLAASVSKLHH-HI 755
Query: 780 RLQTQALIELKWFYHNLTGFTPLHPPVPRTF-------MSTDASD-VGWGAMVGNVSVQG 831
L EL + H L + H + T + TDAS VG+G
Sbjct: 756 SLNLDCRRELAMWEHFLAAWNGAHFFLHSTVTLASDIDIFTDASSTVGFGGYFKGSWFCD 815
Query: 832 VWTQAQRSWHIN-----LKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLR 886
W S H N L EL+ + A + + H + DN + IRK G
Sbjct: 816 KWPVELDSQHNNELSMALLELYPIVVAAMLWGTQWSQHRISFNCDNLATVHIIRK-GRAS 874
Query: 887 SHALLAET--KKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
SH + ++L L+ + N + + +PG NS+AD+LSR
Sbjct: 875 SHCCIINKLMRRLTLLAMQYNFVFLAHHLPGAHNSIADSLSR 916
>gi|301620195|ref|XP_002939468.1| PREDICTED: hypothetical protein LOC100492902 [Xenopus (Silurana)
tropicalis]
Length = 474
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
+A D+ A+ +P+ + L +KG+ Y CL G + + F S ++ + R
Sbjct: 94 MAKADVESAFRLLPVHTESQHLLGCYFKGSYYVDRCLPMGCSISCAYFEAFSTFLEWVAR 153
Query: 412 ER-GVRCLV-YLDDFLLASQDSVVLKNQIFQTL 442
+R GV ++ YLDDFL + L + QTL
Sbjct: 154 KRAGVNTIIHYLDDFLCVGPGNSGLCAVLLQTL 186
>gi|291192134|gb|ADD83130.1| reverse transcriptase [Cucumis hystrix]
Length = 143
Score = 41.2 bits (95), Expect = 2.5, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L + + LQ + IDL Y + I + F +
Sbjct: 5 DYRELNKVTVKNKYPLPRIENLFDQLQGATVFSKIDLRSGYHQLRIRDNDISKMAFRSRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ +SFGL +AP AF +L N V + + +V++DD L+ S+ + + Q
Sbjct: 65 GHYEFIVMSFGLTNAPAAFMELMNRVFKDFLD--IFVIVFIDDILVYSKTKAEHEKHLHQ 122
Query: 441 TLPV 444
L +
Sbjct: 123 VLEI 126
>gi|425856941|gb|AFX98089.1| pol protein [Simian foamy virus]
Length = 1141
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 16/226 (7%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG R V + + +N + + + I + + Y T+DL+ + PI
Sbjct: 209 DGRWRMVLDYREVNKTIPLIAAQNQHSAGILATIVRKKYKTTLDLANGFWAHPITPESYW 268
Query: 667 FLCFLIPMDMSSF----RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
F + + L+SP + T + L+E Y+DD L+ DP
Sbjct: 269 LTAFTWQGKQYCWTRLPQGFLNSPALF-TADVVDLLKEIS-NVQAYVDDIYLSHDDPQEH 326
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------TDLLQVRLPVDKIPP 776
NQ+ + Q+L G+ V+LKKS+I V++LG + T+ + +L +D PP
Sbjct: 327 LNQLEKVFQILLQAGYVVSLKKSEIA-QKTVEFLGFNITKEGRGLTEAFKAKL-LDITPP 384
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWG 821
+D Q Q+++ L F N + F L P+ S + W
Sbjct: 385 -KDLKQLQSILGLLNFARNFILNFAELVKPLYSLISSAKGKYIEWS 429
>gi|4808993|gb|AAD30048.1|AF133051_3 pol polyprotein [Walleye epidermal hyperplasia virus 1]
Length = 1200
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 352 LATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLL 410
IDLS A+ +PI + F ++G Y T L G +P F+Q L + ++ +
Sbjct: 261 FTVIDLSNAFFSVPIHPDSQYLFAFTFEGRQYTWTVLPQGFIHSPTLFSQALFSSLSKIK 320
Query: 411 RERGVRCLVYLDDFLLASQDS 431
+Y+DD L+AS+D
Sbjct: 321 DSLTSEICIYMDDVLIASRDE 341
>gi|301608169|ref|XP_002933672.1| PREDICTED: hypothetical protein LOC100488716 [Xenopus (Silurana)
tropicalis]
Length = 1359
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
Y+ T+DL++ Y +P+ + F ++Q + FGL AP F ++ + + L
Sbjct: 948 YITTLDLTRGYWQVPLTESAKEKTAFSTPQGLFQYVRMPFGLQGAPATFQRMMDHI---L 1004
Query: 411 RERGVRCLVYLDDFLLASQD 430
+ YLDD ++ S+D
Sbjct: 1005 SPHQLYASAYLDDVVIFSRD 1024
>gi|32489310|emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group]
Length = 3200
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 137/348 (39%), Gaps = 35/348 (10%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ R + + LN+ + + ++ L + +DL Y I +A
Sbjct: 2010 DGSWRVCIDYRQLNAITKKGTYPMPIIDELLDELAGAKIFSKLDLRAGYHQIRMAEGEEF 2069
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRC-LVYLDDFLLASQDPIVL 722
F ++ S G T + + LR +C LV+ DD L+ S D
Sbjct: 2070 KTAFQTHSGHYEYKVMSFGLTGAPATFQGAMNDTLRPLLRKCALVFFDDILIYSPDMNSH 2129
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG--ISWD---TDLLQVRLPVD-KIPP 776
+ + Q LQLL W+V L K + ++ YLG IS TD +++ VD +P
Sbjct: 2130 LDHLKQVLQLLDTHQWKVKLSKCDFAQT-QISYLGHIISGQGVSTDPSKIQSIVDWAVPT 2188
Query: 777 LRDRLQTQALIELKWFYHNLT-GFTPLHPPVPRTFMSTDASDVGWGAMVGNV--SVQGVW 833
+L + + L +Y F L P+ + + DA V W A V +++
Sbjct: 2189 TLKKL--RGFLGLAGYYRKFVKDFGTLSKPLTQ-LLKKDAPFV-WSAEVNQAFQALKHAL 2244
Query: 834 TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAE 893
T N ++ FT I ++ S + V+ S N+ +A++ K G R+ L
Sbjct: 2245 TSTPVLALPNFQQGFT----IETDASDIGIGAVL--SQNQHPVAFVSKALGPRTQGLSTY 2298
Query: 894 TKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTE 941
K+ L IM ++ H PY +I D H L LTE
Sbjct: 2299 EKECLAIMMAVD-HWRPYL----------QFQEFLIITDHHSLMHLTE 2335
>gi|270011286|gb|EFA07734.1| hypothetical protein TcasGA2_TC002212 [Tribolium castaneum]
Length = 1491
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L+ Y + +DL + H+ +A ++ F+ Y+ + FGL +AP F + +
Sbjct: 549 LKNKRYFSCLDLKNGFHHVRMAPSSIKYTSFVTPLGQYEFLKMPFGLTNAPHVFQRYIHE 608
Query: 406 V-AVLLRERGVRCLVYLDDFLLASQD 430
V + L+ + LVYLDD ++A++D
Sbjct: 609 VFSDLINSHKI--LVYLDDIMIATED 632
>gi|326663789|ref|XP_003197661.1| PREDICTED: hypothetical protein LOC100333208 [Danio rerio]
Length = 1481
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ +T+DL++ Y IP++ R F ++Q L FGL AP F +L + + L
Sbjct: 1079 FYSTLDLTKGYWQIPLSPISREKTAFTTPFGLHQFVTLPFGLFGAPATFQRLMDKI---L 1135
Query: 411 RERGVRCLVYLDDFLLASQD 430
YLDD ++ S D
Sbjct: 1136 ARHSAYAAAYLDDIIIFSND 1155
>gi|291192127|gb|ADD83127.1| reverse transcriptase [Cucumis hystrix]
Length = 143
Score = 41.2 bits (95), Expect = 2.6, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L + + LQ + IDL Y + I F +
Sbjct: 5 DYRELNRVTVKNKYPLPRIEDLFDQLQGATVFSKIDLHSGYHQLRIRDSDISKTAFRSRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ +SFGL +AP AF +L N V + + +V++DD L+ SQ + + Q
Sbjct: 65 GHYEFIVMSFGLTNAPAAFMELMNRVFKGFLD--ISVIVFIDDILVYSQTEAEHEEHLHQ 122
Query: 441 TL 442
L
Sbjct: 123 VL 124
>gi|294882229|ref|XP_002769655.1| gag/pol/env polyprotein, putative [Perkinsus marinus ATCC 50983]
gi|239873240|gb|EER02373.1| gag/pol/env polyprotein, putative [Perkinsus marinus ATCC 50983]
Length = 617
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 86 VWTQAQRSWHINLKELFTVRAA---ISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSH 142
+W AQ +WH N KE F + A ++S + V+ TV SD+ T I+++ L
Sbjct: 3 MWKNAQYNWHQNRKEAFALAGAYLFLNSVVAYVSPLTVRFWSDSHTAISWVTGGSKLTCE 62
Query: 143 AL-LAETKKLLLIMSKL------NIHIVP--YFIPGKCNSLADALSR 180
++ +L+ M+ L +VP Y + GK NS AD LSR
Sbjct: 63 SIERVAISRLIDAMADLRESWHRRYGLVPVTYHLAGKKNSSADELSR 109
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 832 VWTQAQRSWHINLKELFTVRAA---ISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSH 888
+W AQ +WH N KE F + A ++S + V+ TV SD+ T I+++ L
Sbjct: 3 MWKNAQYNWHQNRKEAFALAGAYLFLNSVVAYVSPLTVRFWSDSHTAISWVTGGSKLTCE 62
Query: 889 AL-LAETKKLLLIMSKL------NIHIVP--YFIPGKCNSLADALSR 926
++ +L+ M+ L +VP Y + GK NS AD LSR
Sbjct: 63 SIERVAISRLIDAMADLRESWHRRYGLVPVTYHLAGKKNSSADELSR 109
>gi|32480328|emb|CAE02460.1| OSJNBa0042D13.13 [Oryza sativa Japonica Group]
Length = 784
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 4 DYRALNEVTIKNKYPLPRIDDLFDQLKDATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 63
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 64 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQ 110
>gi|116208568|ref|XP_001230093.1| hypothetical protein CHGG_03577 [Chaetomium globosum CBS 148.51]
gi|88184174|gb|EAQ91642.1| hypothetical protein CHGG_03577 [Chaetomium globosum CBS 148.51]
Length = 1508
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKND------YLATIDLSQAYCHIPIAR 368
G+ I + + LN VT K N +PL + D + +D+ A+ I +A
Sbjct: 576 GVRICHDYRGLNE-VTIK-----NRYPLPLIRETLDALCGAKFYTKLDVIAAFNRIRVAE 629
Query: 369 RHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
H F+ + +++ FGL +AP F N VL + C YLDD L+ S
Sbjct: 630 GHEWLTAFITRFGLFEMLVTPFGLCNAPATFQNYIN--HVLHDALDIYCTAYLDDVLVFS 687
Query: 429 Q 429
+
Sbjct: 688 K 688
>gi|38344639|emb|CAE05072.2| OSJNBa0094P09.11 [Oryza sativa Japonica Group]
Length = 976
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 94 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 153
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 154 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 200
>gi|270016158|gb|EFA12606.1| hypothetical protein TcasGA2_TC001846 [Tribolium castaneum]
Length = 1134
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 320 FNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYK 379
F+ + LN + L +I L+ +++++DL +A+ IP++ + F +
Sbjct: 535 FDGRKLNEITKHDSYPLPRIDRILSLLRDAKFISSLDLRRAFWQIPLSEPSKEKTAFAVQ 594
Query: 380 GT-VYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
G ++Q T + FGL ++ Q +L + A+ + + VYLDD ++ +
Sbjct: 595 GRGLFQFTVMPFGLRNSAQTQQRLMD--AIFGPQFEPKIFVYLDDLIIVT 642
>gi|321471688|gb|EFX82660.1| hypothetical protein DAPPUDRAFT_316481 [Daphnia pulex]
Length = 1352
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 33 LTYLAQALIELKWFYHNLTGFTPLHPPVPRTFMSTDASDVG--WGAMVGNVSVQGV--WT 88
L +A+A+++ ++ FT P V ++ TD G + + + +G+ +
Sbjct: 1020 LKQIAEAIMK----SDDVKEFTDHSPEVASVWLETDPGHAGRLFRSFIARHGHRGIKEFD 1075
Query: 89 QAQRSWHINLKELFTVRAAISSNP-SLVANHTVVLQSDNKTVIAYIRKQGGLRS------ 141
A +W +N + L +V ++ +NP S N +D+ I K G R+
Sbjct: 1076 IATETWGMNCRSLVSVLQSMVANPVSFAPNSQPTKSNDDWLKIIGQSKPGKYRALKFFVP 1135
Query: 142 ---HALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTESVF 198
A++A K L++ +++ + Y LA L R IPD +L+ T S
Sbjct: 1136 RSRDAVIAREKTKSLLIRTIHVFRMAY------RRLAQLLVRDGKIPDANLIFFFTHSEL 1189
Query: 199 QRWGIESCAALCDPESPGQQGGIHRCLLKKVGFQASVGLPAPASTSSS 246
Q+ + + AL ++ +H L V + S+G+P P SSS
Sbjct: 1190 QQLILSNGVALI--SKANRRRKLHPDLDALVFPEMSLGIPKPLEESSS 1235
>gi|307214608|gb|EFN89574.1| hypothetical protein EAI_09109 [Harpegnathos saltator]
Length = 41
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 371 RRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLR 411
R+FL F +K VY+ T LSFGLA+AP F ++ V LLR
Sbjct: 1 RKFLRFQWKNVVYKFTSLSFGLATAPYIFTKIVRSVVKLLR 41
>gi|301603809|ref|XP_002931558.1| PREDICTED: hypothetical protein LOC100494839 [Xenopus (Silurana)
tropicalis]
Length = 902
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 457 SHPTHSLVANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFI 516
SH L+AN V+ DN +V+ I Q S +L + L+L ++NI +
Sbjct: 800 SHIWGELLANQRVIFWCDNSSVVQVINNQTS-SSPPVLNLLRALVLQCLRMNIWFRARHV 858
Query: 517 PGKCNSLADALSR 529
PG NS+ADALSR
Sbjct: 859 PGVQNSIADALSR 871
>gi|41469527|gb|AAS07293.1| putative retrotransposon polyprotein [Oryza sativa Japonica Group]
gi|108708989|gb|ABF96784.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 671
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I + F +
Sbjct: 390 DYRALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIREEDIPKIAFTTRY 449
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+
Sbjct: 450 GLYECTVMSFGLTNAPTFFMNLMNKVFMEFLDKFV--VVFIDDILIYSK 496
>gi|270015273|gb|EFA11721.1| hypothetical protein TcasGA2_TC001808 [Tribolium castaneum]
Length = 1278
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 30/248 (12%)
Query: 607 DGTMRPVFNLKS-LNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
DGT+R + K+ LN + ++ + + I ++ Y T+D+ +AY H+P+
Sbjct: 518 DGTIRLCADYKTTLNRVIEEDRYPIPKIEDIFNKMRGGKYFCTLDIQKAYLHMPVD--EE 575
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRER------GVRCLVYLDDFLLASQDP 719
+ I ++ GV +R ++ GV C + DD + + P
Sbjct: 576 SAIMQAISTHKGVYKVKRLMFGVKTAPNAWQRFMDQMLQDLEGVVC--FFDDIAVQGKTP 633
Query: 720 IVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLPVDKIPPLRD 779
L ++ LQ L VN K Q ++ + +LG D + L +K+ + +
Sbjct: 634 DELLVRLRCVLQRLRDFDLHVNKDKCQFFKTN-ISFLGHKIDKNGLHT--TKEKVEAVVN 690
Query: 780 RLQTQALIELKWF---YHNLTGFTP-----LHP-------PVPRTFMSTDASDVGWGAMV 824
+ + L EL+ F + F P LHP VP T+ +TDAS G GA++
Sbjct: 691 SKRPEKLSELRTFLGLVNYYQKFLPNLSSKLHPLYQLLKKNVPFTW-TTDASPTGLGAVL 749
Query: 825 GNVSVQGV 832
+ + G
Sbjct: 750 SHRTSDGA 757
>gi|321453393|gb|EFX64634.1| hypothetical protein DAPPUDRAFT_266050 [Daphnia pulex]
Length = 384
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 608 GTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPI 660
G RP+ NLK LN + + FK+ + + + D++ IDL AY +P+
Sbjct: 325 GGFRPIINLKKLNDLLVYRHFKMEGLPTLKHLIGEEDWMVKIDLKDAYLTVPV 377
>gi|291235652|ref|XP_002737758.1| PREDICTED: reverse transcriptase/ribonuclease H-like [Saccoglossus
kowalevskii]
Length = 296
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 120 VVLQSDNKTVIAYIRK-QGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 178
+ DN+ + IRK + HA+ ++L L + N I+ F+PGK NS+ADAL
Sbjct: 206 ICFNCDNQATVNIIRKGRAASHCHAINTLMRRLTLTAMQHNFTILAQFLPGKQNSIADAL 265
Query: 179 SRQALIPDWHLLPSLTES 196
S L L P E+
Sbjct: 266 SSFQLQKFRELAPDAQEN 283
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 866 VVLQSDNKTVIAYIRK-QGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 924
+ DN+ + IRK + HA+ ++L L + N I+ F+PGK NS+ADAL
Sbjct: 206 ICFNCDNQATVNIIRKGRAASHCHAINTLMRRLTLTAMQHNFTILAQFLPGKQNSIADAL 265
Query: 925 SRQALIPDWHLLPSLTES 942
S L L P E+
Sbjct: 266 SSFQLQKFRELAPDAQEN 283
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 469 VVLQSDNKTVITYIRK-QVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADAL 527
+ DN+ + IRK + +A+ ++L L + N I+ F+PGK NS+ADAL
Sbjct: 206 ICFNCDNQATVNIIRKGRAASHCHAINTLMRRLTLTAMQHNFTILAQFLPGKQNSIADAL 265
Query: 528 SRQALIPDWHLLPSLTESVFP 548
S L L P E+ P
Sbjct: 266 SSFQLQKFRELAPDAQENKSP 286
>gi|357623117|gb|EHJ74397.1| hypothetical protein KGM_14981 [Danaus plexippus]
Length = 245
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 575 SRKWDFKLAWVFPPPPLL-QVLHHLNDAQGLY 605
S+ W ++LAW+FPPP L+ ++L HLN A G +
Sbjct: 197 SKSWHYRLAWLFPPPSLIPRLLDHLNSASGQF 228
>gi|13559301|dbj|BAB40820.1| reverse transcriptase [Chlorella vulgaris]
Length = 143
Score = 41.2 bits (95), Expect = 3.0, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ +SLN K+ L + L+ + IDL Y + I F +
Sbjct: 5 DYRSLNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTGDIPKTAFSTRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+D
Sbjct: 65 GLYEFTVMSFGLTNAPAYFMNLMNKVFMDYLDKFV--VVFIDDILIYSKD 112
>gi|330923367|ref|XP_003300213.1| hypothetical protein PTT_11391 [Pyrenophora teres f. teres 0-1]
gi|311325771|gb|EFQ91691.1| hypothetical protein PTT_11391 [Pyrenophora teres f. teres 0-1]
Length = 245
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLA------TIDLSQAYCHIPIAR 368
G+ I + + LN+ VT K N +PL + D L +D+ A+ + IA
Sbjct: 80 GVRICQDYRGLNN-VTIK-----NRYPLPLIRETLDALCDAKVYTKLDIIAAFNKLRIAE 133
Query: 369 RHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
H F+ + +Y+ + FGL +AP +F N L +R C YLDD L+ S
Sbjct: 134 GHEWKTAFITRFGLYESLVMPFGLCNAPASFQNYINHTLHDLLDR--ICTAYLDDVLVYS 191
Query: 429 QDS 431
++
Sbjct: 192 KNK 194
>gi|427780885|gb|JAA55894.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1358
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 313 NTGLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 372
+ + + + ++LN+ F + N ++ + K Y++ +D+++ Y IP++ +
Sbjct: 985 DGSIRVCVDYRNLNAITEPDSFPMGNVTELLYTIAKAKYISVLDMTRGYWQIPLSGESQG 1044
Query: 373 FLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F +Y + +GL ++ F ++ N +L R C Y+DD + S+
Sbjct: 1045 LAAFATPSGLYAWKVMPYGLRNSAATFQRIVN--ELLANHRQYAC-AYIDDVAVFSE 1098
>gi|427780775|gb|JAA55839.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1152
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 346 LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNW 405
L Y +++DL Y IP+ R F+ +++ + FGL +AP F + +
Sbjct: 376 LHSAAYFSSVDLRSGYWQIPMHPSDREKTAFVTPDGLFEFNVMPFGLCNAPATFERFMDS 435
Query: 406 VAVLLRERGVR---CLVYLDDFLL 426
+ RG++ C+ YLDD ++
Sbjct: 436 IL-----RGLKWETCMCYLDDVII 454
>gi|7109191|gb|AAF36671.1|AF222049_2 pol protein [Drosophila melanogaster]
Length = 1037
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFL 377
++ + + LN +F + N +I L +T+DL++ + I + + F
Sbjct: 189 LVVDYRKLNKETIEDRFPIPNIDEIFDKLGDCKIFSTLDLAKGFYQIEMDNKDVHKTAFS 248
Query: 378 YKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQD 430
Y+ + FGL +AP F +L N +L G C+VY+DD L+ S++
Sbjct: 249 TTSGHYEFLRMPFGLRNAPSTFQRLMN--NILSPYTGQFCIVYMDDILIFSKN 299
>gi|62082779|gb|AAX62218.1| reverse transcriptase [Marchantia polymorpha]
Length = 115
Score = 41.2 bits (95), Expect = 3.2, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 327 SYVTTKKFKLINHQKIPLF------LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+Y + L + IP L Y +DL+ Y + I R F+
Sbjct: 8 NYCALNRITLKDRYPIPYIDVLLDRLHGAKYFTKLDLASGYHQLRIHEDDRHKTAFVTPD 67
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLAS 428
Y+ + FGLA+AP AF + +N + L +VYLDD L+ S
Sbjct: 68 GFYEWKKILFGLANAPAAFMRKTNKI---LGPHSQHAVVYLDDLLIFS 112
>gi|18378613|gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 140/350 (40%), Gaps = 39/350 (11%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG+ R + + LN+ + + ++ L + +DL Y I +A
Sbjct: 25 DGSWRVCIDYRQLNAITKKGTYPMPIIDELLDELAGAKIFSKLDLRAGYHQIRMAEGEEF 84
Query: 667 FLCFLIPMDMSSFRP-SLSSPGVCPTIK--LGRRLRERGVRC-LVYLDDFLLASQDPIVL 722
F ++ S G T + + LR +C LV+ DD L+ S D
Sbjct: 85 KTAFQTHSGHYEYKVMSFGLTGAPATFQGAMNDTLRPLLRKCALVFFDDILIYSPDMNSH 144
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG--ISWD---TDLLQVRLPVD-KIPP 776
+ + Q LQLL W+V L K + ++ YLG IS TD +++ VD +P
Sbjct: 145 LDHLKQVLQLLDTHQWKVKLSKCDFAQT-QISYLGHIISGQGVSTDPSKIQSIVDWAVPT 203
Query: 777 LRDRLQTQALIELKWFYHNLT-GFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ 835
+L + + L +Y F L P+ + + DA V W A V N + Q +
Sbjct: 204 TLKKL--RGFLGLAGYYRKFVKDFGTLSKPLTQ-LLKKDAPFV-WSAEV-NQAFQAL-KH 257
Query: 836 AQRSWHI----NLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALL 891
A S + N ++ FT I ++ S + V+ S N+ +A++ K G R+ L
Sbjct: 258 ALTSTPVLALPNFQQGFT----IETDASDIGIGAVL--SQNQHPVAFVSKALGPRTQGLS 311
Query: 892 AETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSLTE 941
K+ L IM ++ H PY +I D H L LTE
Sbjct: 312 TYEKECLAIMMAVD-HWRPYL----------QFQEFLIITDHHSLMHLTE 350
>gi|367012495|ref|XP_003680748.1| hypothetical protein TDEL_0C06480 [Torulaspora delbrueckii]
gi|359748407|emb|CCE91537.1| hypothetical protein TDEL_0C06480 [Torulaspora delbrueckii]
Length = 1374
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 348 KNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVA 407
K +T+DL Y IP+ F YQ + FGL +AP F S ++A
Sbjct: 584 KASIFSTLDLHSGYHQIPVKPEDVPKTAFTTHNGKYQYRVMPFGLVNAPSTF---SRYMA 640
Query: 408 VLLRERGVRCLVYLDDFLLAS 428
+ R+ LVYLDD L+ S
Sbjct: 641 DIFRDLPF-VLVYLDDILVIS 660
>gi|291192125|gb|ADD83126.1| reverse transcriptase [Cucumis hystrix]
Length = 143
Score = 40.8 bits (94), Expect = 3.3, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ K LN K+ L + + LQ + IDL Y + I F +
Sbjct: 5 DYKKLNKVTIKNKYSLPRVEDLFDQLQGATVFSKIDLRSGYHQLRIRDSDISKTAFRSRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ +SFGL +AP AF +L N V + + +V++DD L+ S+ + + Q
Sbjct: 65 GHYEFIVMSFGLTNAPAAFMELMNRVFKDFLD--ISVIVFIDDILVYSKTEAEHEEHLHQ 122
Query: 441 TL 442
L
Sbjct: 123 VL 124
>gi|432959527|ref|XP_004086328.1| PREDICTED: uncharacterized protein LOC101156474 [Oryzias latipes]
Length = 1091
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
D +R N LN+ + + ++ L+ +L T+DL + Y +P++ +
Sbjct: 592 DPNLRYCVNFSKLNAVSAFDSYPMPRVDELIERLRNATFLTTLDLCKGYWQVPLSEDSKD 651
Query: 667 FLCFLIPMDMSSFRPSLSSPGVCPTIKLGRRLRERGVR-----CLVYLDDFLLASQDPIV 721
F +P + FR + G+ +RL + G+R Y+DD ++ S+
Sbjct: 652 LTTFRVPTGLFRFR--VMPFGLHGAPATFQRLVDEGLRGAEDYAAAYIDDIVVFSRCWDE 709
Query: 722 LKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLG 757
+ Q + G +N +K +I + +V+YLG
Sbjct: 710 HVQHLSDIFQRIQNAGLVINARKCKIAKT-QVEYLG 744
>gi|301630389|ref|XP_002944304.1| PREDICTED: hypothetical protein LOC100485517 [Xenopus (Silurana)
tropicalis]
Length = 1028
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 87 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 146
W +A + ++ EL + ++ + N V+ DN V+ + K S ++
Sbjct: 905 WYKADITKNMVFLELLPILTSLEVWGEELGNKKVIFYCDNMGVVQVLNKMNA-SSIPVVR 963
Query: 147 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPS 192
++L+L+ NI + +PG N +AD+LSR L W+L+PS
Sbjct: 964 LMRRLVLLCMNSNIWLKARHVPGVSNDVADSLSRLQLDRFWNLVPS 1009
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 833 WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLA 892
W +A + ++ EL + ++ + N V+ DN V+ + K S ++
Sbjct: 905 WYKADITKNMVFLELLPILTSLEVWGEELGNKKVIFYCDNMGVVQVLNKMNA-SSIPVVR 963
Query: 893 ETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIPDWHLLPS 938
++L+L+ NI + +PG N +AD+LSR L W+L+PS
Sbjct: 964 LMRRLVLLCMNSNIWLKARHVPGVSNDVADSLSRLQLDRFWNLVPS 1009
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 464 VANHTVVLQSDNKTVITYIRKQVGLRSNALLAETKKLLLIMSKLNIHIVPYFIPGKCNSL 523
+ N V+ DN V+ + K + S ++ ++L+L+ NI + +PG N +
Sbjct: 933 LGNKKVIFYCDNMGVVQVLNK-MNASSIPVVRLMRRLVLLCMNSNIWLKARHVPGVSNDV 991
Query: 524 ADALSRQALIPDWHLLPSL--TESVFPRW 550
AD+LSR L W+L+PS + P+W
Sbjct: 992 ADSLSRLQLDRFWNLVPSAEPVRTRVPQW 1020
>gi|294864281|gb|ADF46021.1| reverse transcriptase [Eleocharis erythropoda]
Length = 143
Score = 40.8 bits (94), Expect = 3.3, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN KF + + L + Y + +DL Y I +A + F
Sbjct: 5 DYRKLNKDTVKNKFPIPIIDDLLDELHEAQYFSKLDLRAGYHQIKMADEDKMKTAFRTHE 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ + FGL +AP F L N + + V LV+ DD L+ S D N + Q
Sbjct: 65 GHYEFNVMPFGLTNAPATFQCLMNSIFKPFLRKFV--LVFFDDILVYSSDLTSHLNHLRQ 122
Query: 441 TLPV 444
L V
Sbjct: 123 VLEV 126
>gi|294883549|ref|XP_002770980.1| hypothetical protein Pmar_PMAR022222 [Perkinsus marinus ATCC 50983]
gi|239874137|gb|EER02796.1| hypothetical protein Pmar_PMAR022222 [Perkinsus marinus ATCC 50983]
Length = 290
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 30/180 (16%)
Query: 32 LLTYLAQALIELKWFYHNLTGFTPLHPPVPR-TFMSTDASDVGWGAMVGNVSVQGVW--T 88
L+ ++ + + W + G P+ +P + +T+ D+ A G+W T
Sbjct: 87 LVCFVDASPVGYGWCIKVVNGTVPISDIIPELSKPNTEVWDLAEQA--------GIWLST 138
Query: 89 QAQRSWHINLKELFTVRAAISSNPSLVANH--------TVVLQSDNKTVIAYIRKQGGLR 140
+AQRSWHIN KEL + + ++ +H ++ + +D++T + ++ + G +
Sbjct: 139 KAQRSWHINRKELAAIGKLMLYLHGMLCSHRTIGPPISSIFVYADSQTALRWMENRVGAK 198
Query: 141 SHALLAETKKLLLIMSKL-------NIHIVPYFIPGKCNSLADALSRQALIPDWHLLPSL 193
S +A ++L+ +++L I + + G N AD LSR L+ W L SL
Sbjct: 199 SIEKVA-VQRLVCCINELVSDIRASGITVTYGKVEGALNP-ADRLSR--LVEKWGLTASL 254
Score = 40.4 bits (93), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 831 GVW--TQAQRSWHINLKELFTVRAAISSNPSLVANH--------TVVLQSDNKTVIAYIR 880
G+W T+AQRSWHIN KEL + + ++ +H ++ + +D++T + ++
Sbjct: 133 GIWLSTKAQRSWHINRKELAAIGKLMLYLHGMLCSHRTIGPPISSIFVYADSQTALRWME 192
Query: 881 KQGGLRSHALLAETKKLLLIMSKL-------NIHIVPYFIPGKCNSLADALSRQALIPDW 933
+ G +S +A ++L+ +++L I + + G N AD LSR L+ W
Sbjct: 193 NRVGAKSIEKVA-VQRLVCCINELVSDIRASGITVTYGKVEGALNP-ADRLSR--LVEKW 248
Query: 934 HLLPSL 939
L SL
Sbjct: 249 GLTASL 254
>gi|198438239|ref|XP_002130304.1| PREDICTED: zinc finger (CCHC)-8 [Ciona intestinalis]
gi|93003048|tpd|FAA00107.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 1216
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 323 KSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTV 382
+++N Y + L ++I + + + +++DL AY +P+ R + F G +
Sbjct: 495 QTVNRYTQLDAYPLPKIEQIVNSVAADTFYSSLDLRSAYHQVPLLYHERPYTAFEADGCL 554
Query: 383 YQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLL 426
YQ L FG+ + AF ++ + + R + + YLDD +
Sbjct: 555 YQYKRLPFGVTNGVSAFQRVID--RFIARHQLKKVYAYLDDITV 596
>gi|77554736|gb|ABA97532.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 600
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 315 GLSIMFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFL 374
G + + +LN K+ L + L+ + I+L Y + I
Sbjct: 83 GCDMCVDYLALNEVTIKNKYPLPRIDVLFDQLKGTKVFSKIELRSGYHQLRIREEDIPKT 142
Query: 375 CFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
F + +Y+ T +SFGL +AP F L N V R++ V +V++DD L+ S+
Sbjct: 143 AFTTRYGLYECTVMSFGLTNAPAFFINLMNKVFTEFRDKFV--VVFIDDILIYSK 195
>gi|38568040|emb|CAD40414.3| OSJNBa0065J03.10 [Oryza sativa Japonica Group]
Length = 917
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L++ + IDL Y + I F +
Sbjct: 379 DYRALNEVTIKNKYPLPRIDDLFDQLKRAKVFSKIDLRSGYHQLRIREEDIPKKAFTTRY 438
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ S+
Sbjct: 439 GLYECTLMSFGLTNAPAFFMNLMNKVFMEFLDKFV--VVFIDDILIYSK 485
>gi|134119054|ref|XP_771808.1| hypothetical protein CNBN2070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254410|gb|EAL17161.1| hypothetical protein CNBN2070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1073
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 34 TYLAQALIELKWFYHNLTGFTPL-HPPV----PRTFMSTDASDVGWGAMVGN----VSVQ 84
T A LK +TG +PL H + ++ TDAS+ G GA +G Q
Sbjct: 584 TSAQDAFEALKEMVARITGLSPLSHEAILAGQTNLYLFTDASNTGLGAWLGTGLSPDDAQ 643
Query: 85 GV------WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGG 138
+ T A+R++ ++ KEL + A+ L+ V + +D+ T+ + ++
Sbjct: 644 PIAYDSRSLTAAERNYPVHEKELCAIIHALKEWRPLLLGVPVHVMTDHATLKWFFQQPN- 702
Query: 139 LRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
L K+ LL+++ ++ I IPG N +ADA SR
Sbjct: 703 -----LSERQKRWLLVLADYDLQI--SHIPGATNVIADAFSR 737
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 784 QALIELKWFYHNLTGFTPL-HPPV----PRTFMSTDASDVGWGAMVGN----VSVQGV-- 832
A LK +TG +PL H + ++ TDAS+ G GA +G Q +
Sbjct: 588 DAFEALKEMVARITGLSPLSHEAILAGQTNLYLFTDASNTGLGAWLGTGLSPDDAQPIAY 647
Query: 833 ----WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSH 888
T A+R++ ++ KEL + A+ L+ V + +D+ T+ + ++
Sbjct: 648 DSRSLTAAERNYPVHEKELCAIIHALKEWRPLLLGVPVHVMTDHATLKWFFQQPN----- 702
Query: 889 ALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
L K+ LL+++ ++ I IPG N +ADA SR
Sbjct: 703 -LSERQKRWLLVLADYDLQI--SHIPGATNVIADAFSR 737
>gi|21070179|gb|AAM34208.1|AF503912_1 polyprotein [Danio rerio]
Length = 2237
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 318 IMFNLKSLNSYVTTKKFKLINHQKIPLFLQ-KNDYLATIDLSQAYCHIPIARRHRRFLCF 376
++ +L+ +N V T N I L K+ + IDL+ A+ +P+A + + F
Sbjct: 1102 MVHDLRLINEKVLTATLPTPNPYTIMSKLTPKHSHFTCIDLANAFFCMPLAEQCQGIFAF 1161
Query: 377 LYKGTVYQRTCLSFGLASAPQAFAQ-LSNWVAVLLRERGVRCLVYLDDFLLASQDSVV 433
Y+G Y L G +P F Q L + G + Y+DD LLA+ + V
Sbjct: 1162 SYQGAQYTYNRLPQGFILSPGLFNQALRELLDSCTLHEGTIVIQYVDDLLLAAHSNEV 1219
>gi|357601912|gb|EHJ63186.1| hypothetical protein KGM_18387 [Danaus plexippus]
Length = 191
Score = 40.8 bits (94), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 673 PMDMSSFRPSLS--SPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVLKNQILQTL 730
P D S+ PS S S G+C + LR++G+ L+YL+D+L+A +D L Q Q
Sbjct: 52 PNDTSAIWPSSSAISFGLCDELS-AEILRKKGLGLLIYLEDYLIAHRDKDKLTTQA-QVF 109
Query: 731 QLLTYLGWQVNLKKS 745
LGW VN +K+
Sbjct: 110 ICCRGLGWWVNTEKA 124
>gi|110282984|sp|P14350.2|POL_FOAMV RecName: Full=Pro-Pol polyprotein; AltName: Full=Pr125Pol;
Contains: RecName: Full=Protease/Reverse
transcriptase/ribonuclease H; AltName:
Full=p87Pro-RT-RNaseH; Contains: RecName:
Full=Protease/Reverse transcriptase; AltName:
Full=p65Pro-RT; Contains: RecName: Full=Ribonuclease H;
Short=RNase H; Contains: RecName: Full=Integrase;
Short=IN; AltName: Full=p42In
gi|1617063|emb|CAA69003.1| pol [Human foamy virus]
gi|1617068|emb|CAA68997.1| pol [Human foamy virus]
gi|1617073|emb|CAA68999.1| pol [Human foamy virus]
gi|1850918|gb|AAB48112.1| pro-pol protein [Human spumaretrovirus]
Length = 1143
Score = 40.8 bits (94), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 114/288 (39%), Gaps = 26/288 (9%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG R V + + +N + + + I + + Y T+DL+ + PI
Sbjct: 209 DGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPESYW 268
Query: 667 FLCFLIPMDMSSF----RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
F + + L+SP + T + L+E VY+DD L+ DP
Sbjct: 269 LTAFTWQGKQYCWTRLPQGFLNSPALF-TADVVDLLKEIP-NVQVYVDDIYLSHDDPKEH 326
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------TDLLQVRLPVDKIPP 776
Q+ + Q+L G+ V+LKKS+ I V++LG + TD + +L I P
Sbjct: 327 VQQLEKVFQILLQAGYVVSLKKSE-IGQKTVEFLGFNITKEGRGLTDTFKTKL--LNITP 383
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVG---NVSVQGV 832
+D Q Q+++ L F N + F L P+ S + W N+ ++ +
Sbjct: 384 PKDLKQLQSILGLLNFARNFIPNFAELVQPLYNLIASAKGKYIEWSEENTKQLNMVIEAL 443
Query: 833 WTQAQRSWHINLKE-LFTVRAAISSNPSLVANHTVVLQSDNKTVIAYI 879
T + NL+E L R I N S A + K I Y+
Sbjct: 444 NTAS------NLEERLPEQRLVIKVNTSPSAGYVRYYNETGKKPIMYL 485
>gi|291192137|gb|ADD83131.1| reverse transcriptase [Cucumis hystrix]
Length = 143
Score = 40.8 bits (94), Expect = 4.2, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L + + LQ + IDL Y + I + F +
Sbjct: 5 DYRELNKVTVKNKYPLPRIEDLFDQLQGATVFSKIDLQSEYRQLRIRDNDMSKMAFRSRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ +SFGL +AP AF +L N V + + +V++DD L+ S+ + + Q
Sbjct: 65 GHYEFIVMSFGLTNAPAAFMELMNRVFKDFLD--IFVIVFVDDILVYSKTEAEHEKHLHQ 122
Query: 441 TL 442
L
Sbjct: 123 VL 124
>gi|254587292|emb|CAX83703.1| Gag-Pol polyprotein [Schistosoma japonicum]
Length = 1367
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 9/115 (7%)
Query: 345 FLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSN 404
L + A +DL+ AY +A R L ++Q L FG+ +AP F QL +
Sbjct: 575 MLNGGKFFAKLDLADAYLQEEVAEESRELLTINTHRGMFQYNRLPFGVKTAPSIFQQLMD 634
Query: 405 WVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQTLPVNLSGNCSRSGRRSHP 459
+L GV YLDD L+ + L+ + N+ S +G R P
Sbjct: 635 --TILAGIAGV--ATYLDDILIVATSPEELRERT-----TNVLQRISENGFRLRP 680
>gi|13559331|dbj|BAB40828.1| reverse transcriptase [Arabidopsis thaliana]
Length = 143
Score = 40.4 bits (93), Expect = 4.4, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F +
Sbjct: 5 DYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFTTRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ
Sbjct: 65 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILIYSQ 111
>gi|88595459|gb|ABD43036.1| reverse transcriptase [Orobanche cernua var. cumana]
Length = 138
Score = 40.4 bits (93), Expect = 4.4, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L + LQ+ + IDL Y + I F
Sbjct: 5 DYRELNRVTIKNKYPLPRIDDLLDQLQRASVFSKIDLRSGYHQLRIRESDIARTAFCTSY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ + FGL +AP F +L N V + +R V +V++DD L+ S++ + + Q
Sbjct: 65 GHYEFVVMPFGLTNAPAVFMELMNRVFINFLDRFV--VVFIDDILIYSRNREEHELHLHQ 122
Query: 441 TLPV 444
L V
Sbjct: 123 VLDV 126
>gi|78708088|gb|ABB47063.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 901
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 12/168 (7%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++ N K+ L + L+ + IDL Y + I + F +
Sbjct: 90 DYRAFNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREANILKTAFTTRY 149
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ ++ +
Sbjct: 150 GLYEFTVISFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQSEEDHQHHLRL 207
Query: 441 TLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGL 488
L R H ++ ++ T V +T IR +GL
Sbjct: 208 VL----------GKLREHQLYAKLSKLTAVTDWKQPKTVTQIRSFLGL 245
>gi|425856935|gb|AFX98084.1| pol protein [Simian foamy virus]
Length = 1143
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 116/288 (40%), Gaps = 38/288 (13%)
Query: 607 DGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRR 666
DG R V + + +N + + + I + + Y T+DL+ + PI
Sbjct: 209 DGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPESYW 268
Query: 667 FLCFLIPMDMSSF----RPSLSSPGVCPTIKLGRRLRERGVRCLVYLDDFLLASQDPIVL 722
F + + L+SP + T + L+E VY+DD L+ DP
Sbjct: 269 LTAFTWQGKQYCWTRLPQGFLNSPALF-TADVVDLLKEIP-NVQVYVDDIYLSHDDPQEH 326
Query: 723 KNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------TDLLQVRLPVDKIPP 776
Q+ + Q+L G+ V+LKKS+ I V++LG + TD + +L ++ PP
Sbjct: 327 IQQLEKVFQILLQAGYVVSLKKSE-IGQKTVEFLGFNITKEGRGLTDTFKTKL-LNVTPP 384
Query: 777 LRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGWGAMVGNVSVQGVWTQ 835
+D Q Q+++ L F N + F L P+ S + W
Sbjct: 385 -KDLKQLQSILGLLNFARNFIPNFAELVQPLYNLIPSARGKYIEWSKE------------ 431
Query: 836 AQRSWHINLKELFTVRAAISSNPSL---VANHTVVLQSDNKTVIAYIR 880
N K+L TV A+++ +L + N +V++ + Y+R
Sbjct: 432 -------NTKQLNTVIEALNTASNLEERLPNQRLVIKVNTSPSAGYVR 472
>gi|339256022|ref|XP_003370754.1| retrovirus-related Pol polyprotein from transposon gypsy
[Trichinella spiralis]
gi|316965702|gb|EFV50382.1| retrovirus-related Pol polyprotein from transposon gypsy
[Trichinella spiralis]
Length = 275
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 330 TTKKFKLINHQKIPLF------LQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKGTVY 383
T +F L++ +P + K + +T+DL +AY IPI R + + F G +Y
Sbjct: 65 TINRFTLLHAYPLPKINDMVQAISKYHFFSTVDLKRAYYQIPINARDKPYTAFEAGGRLY 124
Query: 384 QRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDS 431
Q + FG+ + F ++ + +L E+ VY+D+ + +
Sbjct: 125 QFKRIPFGVMNGAACFQRVMD--NILRVEKLKDSFVYVDNVTICGMNE 170
>gi|19881651|gb|AAM01052.1|AC091735_25 Putative retroelement [Oryza sativa Japonica Group]
Length = 874
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 12/168 (7%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++ N K+ L + L+ + IDL Y + I + F +
Sbjct: 63 DYRAFNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREANILKTAFTTRY 122
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
+Y+ T +SFGL +AP F L N V + ++ V +V++DD L+ SQ ++ +
Sbjct: 123 GLYEFTVISFGLTNAPAFFMNLMNKVFMEYLDKFV--VVFIDDILVYSQSEEDHQHHLRL 180
Query: 441 TLPVNLSGNCSRSGRRSHPTHSLVANHTVVLQSDNKTVITYIRKQVGL 488
L R H ++ ++ T V +T IR +GL
Sbjct: 181 VL----------GKLREHQLYAKLSKLTAVTDWKQPKTVTQIRSFLGL 218
>gi|134106679|ref|XP_778350.1| hypothetical protein CNBA3500 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50261053|gb|EAL23703.1| hypothetical protein CNBA3500 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 390
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 34 TYLAQALIE-LKWFYHNLTGFTPL-HPPV----PRTFMSTDASDVGWGAMVGN----VSV 83
T AQ E LK +TG +PL H + ++ TDAS+ G GA +G +
Sbjct: 195 TTSAQDTFEALKEMVARITGLSPLSHEAILAGQTNLYLFTDASNTGLGAWLGTGLSPDNA 254
Query: 84 QGV------WTQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQG 137
Q + T A+R++ ++ KEL + A+ L+ V + +D+ T+ + ++
Sbjct: 255 QPIAYDSRSLTAAERNYPVHEKELCAIIHALKEWRPLLLGVPVHVMTDHATLKWFFQQPN 314
Query: 138 GLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
L K+ LL+++ ++ I IPG N +ADA SR
Sbjct: 315 ------LSERQKRWLLVLADYDLQIS--HIPGATNVIADAFSR 349
Score = 40.0 bits (92), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 789 LKWFYHNLTGFTPL-HPPV----PRTFMSTDASDVGWGAMVGN----VSVQGV------W 833
LK +TG +PL H + ++ TDAS+ G GA +G + Q +
Sbjct: 205 LKEMVARITGLSPLSHEAILAGQTNLYLFTDASNTGLGAWLGTGLSPDNAQPIAYDSRSL 264
Query: 834 TQAQRSWHINLKELFTVRAAISSNPSLVANHTVVLQSDNKTVIAYIRKQGGLRSHALLAE 893
T A+R++ ++ KEL + A+ L+ V + +D+ T+ + ++ L
Sbjct: 265 TAAERNYPVHEKELCAIIHALKEWRPLLLGVPVHVMTDHATLKWFFQQPN------LSER 318
Query: 894 TKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
K+ LL+++ ++ I IPG N +ADA SR
Sbjct: 319 QKRWLLVLADYDLQIS--HIPGATNVIADAFSR 349
>gi|77549261|gb|ABA92058.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1099
Score = 40.4 bits (93), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ ++LN K+ L + L+ + IDL Y + I F+ +
Sbjct: 253 DYRALNEVTVKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRICEEDIPKTAFITRY 312
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQ 429
+++ T +SFGL +AP F L N V + ++ V +V++DD L+ S+
Sbjct: 313 GLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFV--VVFIDDILIYSK 359
>gi|326678681|ref|XP_003201137.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1145
Score = 40.4 bits (93), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 48/247 (19%)
Query: 43 LKWFYHNLTGFTPL-----------HPPVPRTFM-STDASDVGWGAMVGNVSV------- 83
LKW + FT L HP + F+ DAS+ G GA++ S+
Sbjct: 541 LKWNPDAVRAFTQLKTRFSSAPILRHPDPEQPFVVEIDASNTGIGAILSQRSLVNKKLHP 600
Query: 84 ----QGVWTQAQRSWHINLKELFTVRAAISSNPSLV--ANHTVVLQSDNKTVIAYIRKQG 137
A+R++ + +EL ++AA+ + A H ++ +D+K + YIR
Sbjct: 601 CAFYSRKLNSAERNYDVGNRELLAMKAALEEWRHWLEGAKHPFIVITDHKN-LEYIRS-- 657
Query: 138 GLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR-----QALIPDWHLLPS 192
L + L ++ + + +IPG N ADALSR + IPD ++ S
Sbjct: 658 ---CKRLNPRQARWALFFTRFDFQVT--YIPGSKNIKADALSRLSDDETSEIPDEPIIKS 712
Query: 193 LTESVFQRWGIESCAALCDPESPGQQ----------GGIHRCLLKKVGFQASVGLPAPAS 242
+W I+ +P QQ + L+ +V S G P +
Sbjct: 713 PLIVAPIQWDIDQEILQAAESNPSQQPCPENKIFVPSSLRERLISEVHDHPSSGHPGSTA 772
Query: 243 TSSSIAS 249
T I S
Sbjct: 773 TVQMIQS 779
>gi|301609767|ref|XP_002934431.1| PREDICTED: hypothetical protein LOC100493707 [Xenopus (Silurana)
tropicalis]
Length = 805
Score = 40.4 bits (93), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 67 TDAS-DVGWGAMVGNVSVQGVWTQ--AQRSWHINLK--ELFTVRAAISSNPSLVANHTVV 121
TDAS VG+GA +G W A+R NL ELF + A+ + +AN VV
Sbjct: 653 TDASGSVGFGAYLGGSWCAACWPAGWAERGLLKNLCFLELFPIVVAVFLWGAKLANRRVV 712
Query: 122 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 180
+ DN + + KQ + +L + K+N+ +PG N +ADALSR
Sbjct: 713 FRCDNLGAVQALNKQSATSPEVVRLLRVLVLQCL-KINLCFRAIHVPGVENVVADALSR 770
Score = 40.4 bits (93), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 813 TDAS-DVGWGAMVGNVSVQGVWTQ--AQRSWHINLK--ELFTVRAAISSNPSLVANHTVV 867
TDAS VG+GA +G W A+R NL ELF + A+ + +AN VV
Sbjct: 653 TDASGSVGFGAYLGGSWCAACWPAGWAERGLLKNLCFLELFPIVVAVFLWGAKLANRRVV 712
Query: 868 LQSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
+ DN + + KQ + +L + K+N+ +PG N +ADALSR
Sbjct: 713 FRCDNLGAVQALNKQSATSPEVVRLLRVLVLQCL-KINLCFRAIHVPGVENVVADALSR 770
>gi|390340432|ref|XP_003725242.1| PREDICTED: uncharacterized protein LOC100891783 [Strongylocentrotus
purpuratus]
Length = 637
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 130 IAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSRQALIP-DWH 188
+AYI +QGG S AL +L + + IPG+ N +AD LSR +P +W
Sbjct: 1 MAYINRQGGTHSVALNELASQLWAWCKGARVFPIASHIPGEENIIADFLSRGKCLPSEWT 60
Query: 189 LLPSLTESVFQRWGI 203
L P++ + + +G+
Sbjct: 61 LSPTVFRQLVRVFGV 75
>gi|326676118|ref|XP_003200510.1| PREDICTED: hypothetical protein LOC100535407 [Danio rerio]
Length = 1406
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 351 YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLL 410
+ +T+DL++ Y IP++ R F ++Q L +GL AP F +L + + L
Sbjct: 1079 FYSTLDLTKGYWQIPLSPISREKTAFTTPFGLHQFVTLPYGLFGAPATFQRLMDKILAL- 1137
Query: 411 RERGVRCLVYLDDFLLASQD 430
YLDD ++ S D
Sbjct: 1138 --HSAYAAAYLDDIIIFSND 1155
>gi|294895460|ref|XP_002775184.1| hypothetical protein Pmar_PMAR021590 [Perkinsus marinus ATCC 50983]
gi|239881175|gb|EER07000.1| hypothetical protein Pmar_PMAR021590 [Perkinsus marinus ATCC 50983]
Length = 540
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 64 FMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAA-ISSNPSLVANHTVVL 122
F+S + G A+ G W +Q SWH N +E + + + + +P + +H + +
Sbjct: 4 FLSIGIASGGQVALYGKAKC---WRGSQVSWHQNRQEAYCLGLSFVFCDPLIPYSHGLRV 60
Query: 123 Q--SDNKTVIAYIRKQGGLRSHAL-----------LAETKKLLLIMSKLNIHIVPYFIPG 169
+ +D++T ++++R + S ++ +A+ K++ + ++H V +PG
Sbjct: 61 KFLTDSRTALSWMRGGERVTSRSIERIAISRLCDAVADLKEVW--ARRYDVHPVVDHLPG 118
Query: 170 KCNSLADALSRQALIPDWHL 189
+ NS AD+LSR A WH+
Sbjct: 119 EHNSQADSLSRLAF--SWHI 136
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 810 FMSTDASDVGWGAMVGNVSVQGVWTQAQRSWHINLKELFTVRAA-ISSNPSLVANHTVVL 868
F+S + G A+ G W +Q SWH N +E + + + + +P + +H + +
Sbjct: 4 FLSIGIASGGQVALYGKAKC---WRGSQVSWHQNRQEAYCLGLSFVFCDPLIPYSHGLRV 60
Query: 869 Q--SDNKTVIAYIRKQGGLRSHAL-----------LAETKKLLLIMSKLNIHIVPYFIPG 915
+ +D++T ++++R + S ++ +A+ K++ + ++H V +PG
Sbjct: 61 KFLTDSRTALSWMRGGERVTSRSIERIAISRLCDAVADLKEVW--ARRYDVHPVVDHLPG 118
Query: 916 KCNSLADALSRQALIPDWHL 935
+ NS AD+LSR A WH+
Sbjct: 119 EHNSQADSLSRLAF--SWHI 136
>gi|375281631|gb|AFA44809.1| pol protein [Macaque simian foamy virus]
Length = 1149
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 19/206 (9%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWD------ 761
Y+DD ++ DP Q+ + +L G+ V+LKKS+I V++LG +
Sbjct: 312 YVDDIYISHDDPQEHLEQLEKVFSILLNAGYVVSLKKSEIA-QREVEFLGFNITKEGRGL 370
Query: 762 TDLLQVRLPVDKIPPLRDRLQTQALIELKWFYHN-LTGFTPLHPPVPRTFMSTDASDVGW 820
TD + +L I P +D Q Q+++ L F N + ++ L P+ + + + W
Sbjct: 371 TDTFKQKL--LNITPPKDLKQLQSVLGLLNFARNFIPNYSELVKPLYNIVANANGKFISW 428
Query: 821 GAMVGN--VSVQGVWTQAQRSWHINLKELF-TVRAAISSNPSLVANHTVVLQSDNKTVIA 877
N ++ V QA NL+E R I N S A + +K I
Sbjct: 429 TEENSNQLQNIISVLNQAD-----NLEERNPETRLIIKVNSSPSAGYIRYYNEGSKRPIM 483
Query: 878 YIRKQGGLRSHALLAETKKLLLIMSK 903
YI ++ + +T+K+L M K
Sbjct: 484 YINYVFS-KAESKFTQTEKMLTTMHK 508
>gi|301628205|ref|XP_002943248.1| PREDICTED: hypothetical protein LOC100493969 [Xenopus (Silurana)
tropicalis]
Length = 471
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 95/238 (39%), Gaps = 24/238 (10%)
Query: 708 YLDDFLLASQDPIVLKNQILQTLQ-LLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQ 766
YLDDF Q +L+TLQ + G + K++ P+ + +LG+ D+ +
Sbjct: 208 YLDDFFCVRQANADTCFHLLETLQEVAASFGVPLAADKTEG-PATVMRFLGLEIDSVAGE 266
Query: 767 VRLPVDKIPPL--------RDRLQTQALIELKWFYHNLTGFTPLHPPVPRTFMSTDA-SD 817
RLP K+ L RD+ T L L+ L F PV R F A +
Sbjct: 267 CRLPTQKVEDLTREVGSLRRDKKAT--LQRLQSMLGKLN-FACRVIPVGRVFSRRLAQAT 323
Query: 818 VGWGAMVGNVSVQGVWTQAQ--RSW-------HINLKELFTVRAAISSNPSLVANHTVVL 868
G A +V + W AQ + W ++ ELF + A+ + N +V
Sbjct: 324 AGTQAPHHHVRLNKEWCAAQWPQEWVEAGLVRNLVFLELFPIVVAMFIWERELRNRRIVF 383
Query: 869 QSDNKTVIAYIRKQGGLRSHALLAETKKLLLIMSKLNIHIVPYFIPGKCNSLADALSR 926
SDN V+ I L +L + KLN+ + G N +ADALSR
Sbjct: 384 YSDNIGVLQGINNWSASYQPVLRLLRALVLCCL-KLNVSCRARHVEGCKNDIADALSR 440
>gi|241999992|ref|XP_002434639.1| conserved hypothetical protein [Ixodes scapularis]
gi|215497969|gb|EEC07463.1| conserved hypothetical protein [Ixodes scapularis]
Length = 129
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 288 QIASDRSSNGLLSGNDRGHDIGNLA-----NTGLSIMFNLKSLNSYVTTKKFKLINHQKI 342
Q S +G++ RG + + + + N +L ++ KF+L +
Sbjct: 3 QAVSSMLHSGVVEETTRGPFLSPIQVVPKNDKESPFVLNCSALTPHLQAPKFQL---PPL 59
Query: 343 PLFLQKND-----YLATIDLSQAYCHIPIARRHRRFLCFLYKGTVYQRTCLSFGLASAPQ 397
P+ LQ N + +DL++AY H + RR F G Y+ T + FG+ AP
Sbjct: 60 PIALQVNPLPKYPFFTKLDLAEAYYHCGLHESARRLTTFRLDGRYYRFTVVPFGVRPAPF 119
Query: 398 AFAQLSN 404
L+N
Sbjct: 120 ITQMLAN 126
>gi|388855184|emb|CCF51315.1| uncharacterized protein [Ustilago hordei]
Length = 1304
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 19/137 (13%)
Query: 321 NLKSLNSYVTTK--KFKLINHQKIPLFLQKND--YLATIDLSQAYCHIPIARRHRRFLCF 376
L S+N+ ++ + + Q + F+ +N L DL A+ H+ A R L F
Sbjct: 595 TLPSVNAGISPGFIRIRYEGLQDLLAFVSRNPGCLLWKGDLEDAFRHVVTAERDSHLLGF 654
Query: 377 LYKGTVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLV-------YLDDFLLASQ 429
Y G Y+ L+FG +S+P F N VA L CL YLDD A
Sbjct: 655 SYNGVRYRENALTFGGSSSPWLF----NLVAEFLHWLVAACLPADWPVNHYLDDTFGA-- 708
Query: 430 DSVVLKNQIFQTLPVNL 446
V + + LP+++
Sbjct: 709 --VPVSHTTHALLPIHI 723
>gi|117940151|sp|P0C211.2|POL_HTL1L RecName: Full=Gag-Pro-Pol polyprotein; AltName:
Full=Pr160Gag-Pro-Pol; Contains: RecName: Full=Matrix
protein p19; Short=MA; Contains: RecName: Full=Capsid
protein p24; Short=CA; Contains: RecName:
Full=Nucleocapsid protein p15-pro; Short=NC';
Short=NC-pro; Contains: RecName: Full=Protease;
Short=PR; Contains: RecName: Full=p1; Contains: RecName:
Full=Reverse transcriptase/ribonuclease H; Short=RT;
Contains: RecName: Full=Integrase; Short=IN
Length = 1462
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 606 GDGTMRPVFNLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHR 665
+GT R + +L++ NS + +L TIDL A+ IP+ ++ +
Sbjct: 636 ANGTWRFIHDLRATNSLTVDLSSSSPGPPDLSSLPTTLAHLQTIDLKDAFFQIPLPKQFQ 695
Query: 666 RFLCFLIPMDMSSFRPSLSSPGVCP----------TIKLG---RRLRERGVRCLV--YLD 710
+ F +P + + + V P ++L + +R+ +C++ Y+D
Sbjct: 696 PYFAFTVPQQCNYGPGTRYAWKVLPQGFKNSPTLFEMQLASILQPIRQAFPQCVILQYMD 755
Query: 711 DFLLASQDPIVLKNQILQTLQLLTYLGWQVNLKKSQIIPSHRVDYLGISWDTDLLQVRLP 770
D LLAS P L+ T+ L G V+ K+Q P + +LG + +
Sbjct: 756 DILLASPSPEDLQQLSEATMASLISHGLPVSQDKTQQTPG-TIKFLGQIISPN----HIT 810
Query: 771 VDKIP--PLRDRL---QTQALI-ELKW 791
D +P P+R R + QAL+ E++W
Sbjct: 811 YDAVPTVPIRSRWALPELQALLGEIQW 837
>gi|88595443|gb|ABD43028.1| reverse transcriptase [Orobanche cernua var. cumana]
Length = 143
Score = 40.0 bits (92), Expect = 6.2, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Query: 321 NLKSLNSYVTTKKFKLINHQKIPLFLQKNDYLATIDLSQAYCHIPIARRHRRFLCFLYKG 380
+ + LN K+ L + LQ + IDL Y + I F +
Sbjct: 5 DYRELNRVTIKNKYPLPRIDDLLDQLQGASVFSKIDLRSGYHQLRIRESDIARTAFRTRY 64
Query: 381 TVYQRTCLSFGLASAPQAFAQLSNWVAVLLRERGVRCLVYLDDFLLASQDSVVLKNQIFQ 440
Y+ + FGL +AP F +L N V + +R V +V++DD L+ S++ + + Q
Sbjct: 65 GHYEFVVMPFGLTNAPAVFMELMNRVFINFLDRFV--VVFIDDILIYSRNREEQELHLHQ 122
Query: 441 TLPV 444
L V
Sbjct: 123 VLDV 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,646,301,766
Number of Sequences: 23463169
Number of extensions: 603057550
Number of successful extensions: 1727802
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 880
Number of HSP's that attempted gapping in prelim test: 1724038
Number of HSP's gapped (non-prelim): 4130
length of query: 960
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 807
effective length of database: 8,769,330,510
effective search space: 7076849721570
effective search space used: 7076849721570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)