Query psy15122
Match_columns 927
No_of_seqs 445 out of 1673
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 21:11:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eg5_B Protein diaphanous homo 100.0 3.7E-72 1.3E-76 634.9 31.7 374 73-481 5-383 (383)
2 2bnx_A Diaphanous protein homo 100.0 8.5E-66 2.9E-70 583.9 28.2 364 133-528 3-369 (386)
3 3obv_E Protein diaphanous homo 100.0 5.5E-58 1.9E-62 528.1 25.1 262 591-854 178-439 (457)
4 2j1d_G DAAM1, disheveled-assoc 100.0 1.4E-50 4.7E-55 471.8 22.0 257 591-854 189-447 (483)
5 1v9d_A Diaphanous protein homo 100.0 6.4E-49 2.2E-53 439.2 17.9 234 591-826 107-340 (340)
6 2f31_A Diaphanous protein homo 100.0 2.8E-45 9.7E-50 389.0 21.4 229 135-370 1-233 (233)
7 1ux5_A BNI1 protein; structura 100.0 2.5E-42 8.7E-47 395.8 16.3 215 590-806 189-406 (411)
8 4eah_A Formin-like protein 3, 100.0 1.4E-41 4.7E-46 386.4 16.0 206 591-808 185-390 (402)
9 3eg5_B Protein diaphanous homo 99.7 1.6E-18 5.5E-23 196.1 7.0 275 12-346 5-305 (383)
10 3dad_A FH1/FH2 domain-containi 99.6 9.2E-14 3.2E-18 151.0 20.5 211 135-362 119-333 (339)
11 4dvg_B Diaphanous protein; cyt 99.2 7E-09 2.4E-13 102.1 23.8 280 78-377 4-312 (353)
12 2bnx_A Diaphanous protein homo 98.3 1.4E-07 4.9E-12 106.7 3.5 220 67-346 3-243 (386)
13 2f31_A Diaphanous protein homo 97.5 3.9E-05 1.3E-09 80.7 2.7 195 86-339 17-232 (233)
14 2v8f_C MDIA1, profilin IIA; al 94.9 0.014 4.8E-07 37.6 2.3 7 574-580 14-20 (26)
15 3iot_A Maltose-binding protein 93.9 0.052 1.8E-06 61.9 6.0 14 306-320 274-288 (449)
16 4db8_A Armadillo-repeat protei 93.9 2 6.8E-05 43.9 17.6 175 133-344 11-188 (252)
17 4db6_A Armadillo repeat protei 93.8 2.4 8E-05 42.0 17.5 182 134-351 12-195 (210)
18 4hxt_A De novo protein OR329; 93.6 2.5 8.5E-05 42.8 17.7 175 137-346 5-180 (252)
19 3grl_A General vesicular trans 92.4 1.8 6.3E-05 51.2 15.9 221 79-344 18-262 (651)
20 3iot_A Maltose-binding protein 91.4 0.17 6E-06 57.5 5.7 14 449-462 338-351 (449)
21 4hxt_A De novo protein OR329; 90.9 8.7 0.0003 38.6 17.7 176 136-347 46-223 (252)
22 3tpo_A Importin subunit alpha- 90.7 3.5 0.00012 47.8 16.2 137 206-354 349-486 (529)
23 4db8_A Armadillo-repeat protei 89.9 6.2 0.00021 40.0 15.6 181 135-350 55-236 (252)
24 3ul1_B Importin subunit alpha- 89.7 6 0.00021 45.6 16.9 137 206-354 330-467 (510)
25 4b8j_A Importin subunit alpha- 85.8 11 0.00038 43.1 15.9 160 133-318 73-233 (528)
26 3grl_A General vesicular trans 85.2 3.6 0.00012 48.7 11.2 165 133-326 16-204 (651)
27 3tpo_A Importin subunit alpha- 84.6 4 0.00014 47.2 11.5 117 134-265 76-193 (529)
28 1xqr_A HSPBP1 protein; armadil 84.6 14 0.00048 39.5 14.9 159 154-346 58-219 (296)
29 4b8j_A Importin subunit alpha- 81.2 30 0.001 39.5 17.0 136 206-353 343-484 (528)
30 3ul1_B Importin subunit alpha- 81.1 6.3 0.00022 45.4 11.2 118 133-265 56-174 (510)
31 4db6_A Armadillo repeat protei 80.8 17 0.00059 35.5 13.0 121 205-344 25-146 (210)
32 1xqr_A HSPBP1 protein; armadil 73.8 35 0.0012 36.4 13.6 153 136-318 83-239 (296)
33 2p22_C Protein SRN2; endosome, 72.5 32 0.0011 34.4 11.9 52 747-805 130-181 (192)
34 1wa5_B Importin alpha subunit; 70.5 59 0.002 37.0 15.6 136 206-352 355-497 (530)
35 2jdq_A Importin alpha-1 subuni 68.8 49 0.0017 36.3 14.1 132 206-349 290-427 (450)
36 1jdh_A Beta-catenin; beta-cate 67.2 52 0.0018 37.0 14.1 177 154-354 328-519 (529)
37 2z6g_A B-catenin; FULL-length, 65.8 63 0.0022 39.2 15.2 120 206-343 248-367 (780)
38 1g70_B RSG-1.2 peptide; peptid 65.7 1.7 5.8E-05 27.6 0.6 10 892-901 7-16 (26)
39 1wa5_B Importin alpha subunit; 65.1 64 0.0022 36.7 14.4 158 134-318 87-245 (530)
40 2z6h_A Catenin beta-1, beta-ca 63.7 1E+02 0.0035 36.1 16.2 174 136-344 58-232 (644)
41 2jdq_A Importin alpha-1 subuni 62.7 75 0.0026 34.7 14.0 156 136-318 22-180 (450)
42 1jdh_A Beta-catenin; beta-cate 62.6 85 0.0029 35.2 14.8 174 136-344 61-235 (529)
43 1nxk_A MAP kinase-activated pr 61.0 3 0.0001 46.5 2.0 24 606-629 90-113 (400)
44 1v9d_A Diaphanous protein homo 58.0 41 0.0014 36.6 10.4 56 731-792 252-313 (340)
45 4hpq_C ATG17, KLTH0D15642P; au 57.8 1.3E+02 0.0046 33.5 14.5 30 779-808 326-355 (413)
46 1nxk_A MAP kinase-activated pr 49.5 4 0.00014 45.5 0.5 21 694-714 158-178 (400)
47 2z6h_A Catenin beta-1, beta-ca 49.1 3.7E+02 0.013 31.2 17.9 153 135-317 15-169 (644)
48 1xm9_A Plakophilin 1; armadill 47.4 1.2E+02 0.0041 33.9 12.5 122 135-274 3-126 (457)
49 3obv_E Protein diaphanous homo 47.4 77 0.0026 36.0 10.7 96 702-807 282-385 (457)
50 3t98_B Nucleoporin NUP58/NUP45 41.5 1.4E+02 0.0046 26.2 8.9 72 700-772 18-92 (93)
51 2j1d_G DAAM1, disheveled-assoc 41.1 2E+02 0.0068 32.7 13.0 30 732-761 336-365 (483)
52 3now_A UNC-45 protein, SD10334 38.7 2.2E+02 0.0076 34.7 13.5 123 206-345 637-759 (810)
53 3tt9_A Plakophilin-2; cell adh 36.4 1.8E+02 0.0062 29.6 10.6 123 133-272 7-132 (233)
54 2avr_X Adhesion A; antiparalle 35.5 2.6E+02 0.0089 25.5 11.2 86 695-800 3-89 (119)
55 2z6g_A B-catenin; FULL-length, 34.8 2.1E+02 0.0073 34.5 12.7 99 206-317 207-305 (780)
56 4ffb_C Protein STU2; tubulin f 34.0 2E+02 0.0069 29.5 10.8 93 206-316 69-167 (278)
57 2qk1_A Protein STU2; STU2P, XM 29.3 4.6E+02 0.016 26.5 13.0 100 206-316 118-219 (249)
58 2qk2_A LP04448P; mini spindles 27.1 2.7E+02 0.0091 27.7 10.1 93 205-318 70-163 (242)
59 3opb_A SWI5-dependent HO expre 26.1 2.6E+02 0.0087 33.9 10.8 100 208-315 575-681 (778)
60 1kil_E Complexin I snare-compl 22.4 2.2E+02 0.0074 21.6 5.7 19 807-825 23-41 (49)
61 1w63_A Adapter-related protein 22.0 4.2E+02 0.014 30.8 11.8 117 205-327 290-425 (618)
62 3l6x_A Catenin delta-1; cateni 21.9 9.3E+02 0.032 27.9 14.4 123 206-346 323-455 (584)
63 3now_A UNC-45 protein, SD10334 21.2 1E+03 0.035 28.8 15.0 125 206-351 509-638 (810)
64 3oja_B Anopheles plasmodium-re 20.8 2.8E+02 0.0097 31.9 9.9 41 734-774 547-587 (597)
65 3sjb_C Golgi to ER traffic pro 20.5 4.1E+02 0.014 23.2 8.1 61 698-764 20-82 (93)
66 2qk1_A Protein STU2; STU2P, XM 20.1 6.7E+02 0.023 25.2 13.5 149 135-319 17-177 (249)
No 1
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=100.00 E-value=3.7e-72 Score=634.88 Aligned_cols=374 Identities=41% Similarity=0.727 Sum_probs=314.9
Q ss_pred hhccCCCHHHHHHHHHHHHHhCCCChhhhhhhhCCChHhHHHHHHHHHhccc-cccccccCCCChHHHHHHhcCCccchh
Q psy15122 73 NMLEKLNPEQLNQKFEDMLNDMNLSDEKKEPLRRQPLANKKKMLLMHYKGTV-TSYENKSKFDKPIEYIQYLSQPELSVN 151 (927)
Q Consensus 73 ~~~~~~~~~ei~~~F~~lle~lnl~~~k~~~L~~~p~~~K~~li~~~~~~~~-~~~~~~~~~~~P~~~i~~L~~~~~~~~ 151 (927)
..+..|++++|+++|++||++||++++||++|+++|.++||+||+||.+... ++.+ .+...+|+|||++|+++ .+..
T Consensus 5 ~~~~~~se~ev~~~F~~mL~~mnl~~ek~~~l~~~~~e~Kw~mi~~~~~~~~~~~~~-~~~~~sP~~yi~~L~~~-~~~~ 82 (383)
T 3eg5_B 5 QSLQDISDEQVLVLFEQMLVDMNLNEEKQQPLREKDIVIKREMVSQYLHTSKAGMNQ-KESSRSAMMYIQELRSG-LRDM 82 (383)
T ss_dssp ----------CCHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHHHHHHHC----------CCCHHHHHHHHTTT-CCHH
T ss_pred hhcccCCHHHHHHHHHHHHHHcCCCHHHHHHHHhCCHHHHHHHHHHHHHHhhhcccc-ccCCCCHHHHHHHHHhc-ccch
Confidence 4466789999999999999999999999999999999999999999986532 1222 34578999999999987 4566
Q ss_pred hhhhhHHHHHHHhccCCchhHHHHhhhhhhhhhhcchhhhcCcCCCCCC--CcchhhHHHHHHHHHHHHHHhcHhhHHHH
Q psy15122 152 KMYSCIESLRIALTNHPLSWVNEFVLQDNKNFRKYPIAFLYPRFPSRSR--NDSRYDRVQYECVRCIRAIMNNTVGLKQM 229 (927)
Q Consensus 152 ~~~~~l~~Lrv~L~t~~~sWv~~F~~~Gl~~Ll~~~l~~ll~~l~~~~~--~~~~~~~~~~e~vkCLkaimN~~~Gl~~v 229 (927)
+++++|.+|||+|||+|++||++|+.+|+.+|+++ |..+.. +.. ....+...||+||+|||||||+++|++.|
T Consensus 83 kl~~~L~sL~v~Lrt~~~sWV~~F~~~Gl~~Ll~i-L~~~~~----~~~~~~~~~d~~~q~~~l~CLkalmN~~~G~~~v 157 (383)
T 3eg5_B 83 HLLSCLESLRVSLTSHPVSWVQTFGAEGLASLLDI-LKRLHD----EKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTM 157 (383)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH-HHHHHT----CC-------CHHHHHHHHHHHHHHTSSHHHHHHH
T ss_pred hHHHHHHHHHHHHhhCccHHHHHHHHccHHHHHHH-HHHHhh----ccccccchhhHHHHHHHHHHHHHHhcchhhHHHH
Confidence 78899999999999999999999999999999995 332221 111 12445688999999999999999999999
Q ss_pred hcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCC-C-chHHHHHHHHhhcccccCcChHHHHHHHhccCCCHHHHHH
Q psy15122 230 FGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPP-D-GHDKVIKAITMSGELKGKERFQPVVQGLMVKGNNEALRTA 307 (927)
Q Consensus 230 l~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~-~-Gh~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~~~~~~~ 307 (927)
+.|+++|..|+.|+++.+++++++|+|||+++|+++. . ||++||+||++++..++..||++||..| ....+++|+++
T Consensus 158 l~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv~~L-~~~~~~e~~~~ 236 (383)
T 3eg5_B 158 LETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGL-KSGTSIALKVG 236 (383)
T ss_dssp HTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHTT-STTSCHHHHHH
T ss_pred HcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHhCCCCcHHHHHHHH-HccCcHHHHHH
Confidence 9999999999999999999999999999999999985 3 6999999999999888999999999999 45589999999
Q ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChhHHHHHHHHhhhhHhHHHHHHHhchhcccccCCHHHH
Q psy15122 308 CLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDC 387 (927)
Q Consensus 308 ~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~L~~ql~~f~~~~~~D~~el~~r~~~~~~d~~~~~~~ 387 (927)
||.|||+||++++|+++|+|||+||.++||.+++++|+..++++|.+||++|++.+++|++|+.+|++++++|++|+.+|
T Consensus 237 ~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~lr~~~~~~L~~Qi~~fe~~~~eD~~el~~r~~~~~~d~~d~~~~ 316 (383)
T 3eg5_B 237 CLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDDIRMEMDDFGEV 316 (383)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHCChHHHHHHHhcCCChhHHHHHHHHHHHHHHhHHHHHhhccccCcCcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCchhhHHHHHhhhhccccchhhhhhhhhhhHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHHhccCC
Q psy15122 388 FETVRNMVMDSACEPYLLSILQHLLFIRDDQNMVMDSACEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGG 467 (927)
Q Consensus 388 f~~l~~~v~~t~a~~~f~sil~~ll~~~~~~~~~~~~~~~p~~lSilQhllli~~d~~~~~~~~~Lid~~v~qivl~r~g 467 (927)
|++|++++++|++++|| +||||||++|++|...+.+||+|||+||+|||+|++|
T Consensus 317 ~~~l~~~~~~t~a~~~f--------------------------lSiLQhLlli~~d~~~~~~~~~Lid~~v~qivl~~~g 370 (383)
T 3eg5_B 317 FQIILNTVKDSKAEPHF--------------------------LSILQHLLLVRNDYEARPQYYKLIEECVSQIVLHKNG 370 (383)
T ss_dssp HHHHHHHTTTSTTHHHH--------------------------HHHHHHTTCSCSSCTTHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHhcCCcchHHH--------------------------HHHHHHHHhccCCchhHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999 9999999999999888999999999999999999999
Q ss_pred CCCCcccccccccc
Q psy15122 468 CDPDFRSSRRFQLD 481 (927)
Q Consensus 468 ~d~d~~~~~~~~~d 481 (927)
.||||+++ +|++|
T Consensus 371 ~dpd~~~~-~~~~~ 383 (383)
T 3eg5_B 371 TDPDFKCR-HLQID 383 (383)
T ss_dssp --------------
T ss_pred CCCCCCcc-CCCCC
Confidence 99999877 67665
No 2
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=100.00 E-value=8.5e-66 Score=583.85 Aligned_cols=364 Identities=38% Similarity=0.725 Sum_probs=305.5
Q ss_pred CCChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhhhhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHH
Q psy15122 133 FDKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVLQDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYEC 212 (927)
Q Consensus 133 ~~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~ 212 (927)
..+|+|||++|+++. +.+.++++|++|||+|||+|++||++|+.+|+++|+++ |..+... ........+...+|+|
T Consensus 3 ~~~P~~yv~~L~~~~-~~~~~~~~L~~L~v~Lrt~~~~Wv~~F~~~Gl~~Ll~~-L~~~~~~--~~~~~~~~d~~~~~~~ 78 (386)
T 2bnx_A 3 SRSAMMYIQELRSGL-RDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDI-LKRLHDE--KEETSGNYDSRNQHEI 78 (386)
T ss_dssp CCCHHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH-HHHHHTC--CTTTCCTTHHHHHHHH
T ss_pred CCCHHHHHHHHHhcc-chHHHHHHHHHHhHHHhcCCcHHHHHHHHhHHHHHHHH-HHHHHhc--ccccccchhHHHHHHH
Confidence 579999999999874 55667889999999999999999999999999999995 3332211 1110113467789999
Q ss_pred HHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCC-Cc-hHHHHHHHHhhcccccCcChHH
Q psy15122 213 VRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPP-DG-HDKVIKAITMSGELKGKERFQP 290 (927)
Q Consensus 213 vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~-~G-h~~VL~Al~~~~~~~e~~RF~~ 290 (927)
|+|||||||+++|++.|+.|+.+|..|+.|+++++++++++|+|+|+++|+++. +| |++||+||++++..+++.||++
T Consensus 79 l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~ 158 (386)
T 2bnx_A 79 IRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQP 158 (386)
T ss_dssp HHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHH
T ss_pred HHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHcCCCCCChHHHHHHHHHHHHHhCchhhHHH
Confidence 999999999999999999999999999999999999999999999999999985 48 9999999999988889999999
Q ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChhHHHHHHHHhhhhHhHHHHH
Q psy15122 291 VVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASEDVSVQLKVFIEHKEEDYYEF 370 (927)
Q Consensus 291 lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~L~~ql~~f~~~~~~D~~el 370 (927)
||++| ....+.+|+++||.|||+||++++|+++|+|||+||.++||.+++++|+...+++|++||++|++.+++|.+++
T Consensus 159 lv~~l-~~~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~il~~Lr~~~~~~L~~Qi~~fe~~~~eD~~el 237 (386)
T 2bnx_A 159 LLDGL-KSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDL 237 (386)
T ss_dssp HHHHT-STTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HcCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHH
Confidence 99999 45789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhchhcccccCCHHHHHHHHHHHhhcCCCchhhHHHHHhhhhccccchhhhhhhhhhhHHHHHHHhhhccchhhHHHHH
Q psy15122 371 IQRFDNVRMEIDDVNDCFETVRNMVMDSACEPYLLSILQHLLFIRDDQNMVMDSACEPYLLSILQHLLFIRDDQYVRLAY 450 (927)
Q Consensus 371 ~~r~~~~~~d~~~~~~~f~~l~~~v~~t~a~~~f~sil~~ll~~~~~~~~~~~~~~~p~~lSilQhllli~~d~~~~~~~ 450 (927)
.+|++++.+|++|+.+||+.|++++++|++++|| +||||||++|++|...+.+|
T Consensus 238 ~~r~~~i~~d~~d~~~~~~~l~~~~~~t~~~~~f--------------------------lSiLQhLLli~~d~~~~~~~ 291 (386)
T 2bnx_A 238 KGRLDDIRMEMDDFGEVFQIILNTVKDSKAEPHF--------------------------LSILQHLLLVRNDYEARPQY 291 (386)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHTTSTHHHHH--------------------------HHHHHHHTTSCCCTTTHHHH
T ss_pred HhhhhcCCCCCCCHHHHHHHHHHHHcCCCchhHH--------------------------HHHHHHHHhCCCcchhHHHH
Confidence 9999999999999999999999999999999999 99999999999998889999
Q ss_pred HHHHHHHHHHHHhccCCCCCCccccccccccchHHHHHHHHhhh-hhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy15122 451 YKLLEECVSQIVLHRGGCDPDFRSSRRFQLDVQPLVEHLAEKSK-TEEDRRVEDLSAKLEEAIMLRQEAEAKLVQAQKT 528 (927)
Q Consensus 451 ~~Lid~~v~qivl~r~g~d~d~~~~~~~~~dv~~ll~~l~~~~~-~~~~k~~~el~~kle~~~~~~qe~ea~~~~le~~ 528 (927)
|+|||+||+||++|++|.||||..+ +|+++|+++++.+.++++ ++.+++..+++++++++++++||+++++++.|.+
T Consensus 292 ~~Lid~~v~qivl~~~~~Dpd~~~~-~l~~~v~~l~d~l~~~~~~~~~~~~~~e~~kklee~~~~r~e~~~~~~~~e~~ 369 (386)
T 2bnx_A 292 YKLIEECVSQIVLHKNGTDPDFKCR-HLQIDIERLVDQMIDKTKVEKSEAKATELEKKLDSELTARHELQVEMKKMEND 369 (386)
T ss_dssp HHHHHHHHHHHHTCGGGCCCCTTCS-CCCCCCTTTC-----CTHHHHHHTTTCC-------------------------
T ss_pred HHHHHHHHHHHHhccCCCCCCcccc-cccchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999999999999865 899999999999999876 6667778999999999999999999999887765
No 3
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=100.00 E-value=5.5e-58 Score=528.06 Aligned_cols=262 Identities=47% Similarity=0.762 Sum_probs=253.9
Q ss_pred CccccccccccccccccchhhhhchhHHHHHHHHHHhcccccCCCCCcccceeeecccccccccccCCCCcchhHHHHHH
Q psy15122 591 PEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYLVDT 670 (927)
Q Consensus 591 pe~v~~i~~~i~~v~~A~~el~~S~~f~~lL~~IL~iGNymN~gs~~g~A~GFkLssL~KL~dtKs~d~k~TLLh~l~~~ 670 (927)
++.+.+|+++|.++..||++|++|..|+.||++||++|||||+|+++|+|+||+|+||.||.||||+|+++||||||+++
T Consensus 178 ~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~ 257 (457)
T 3obv_E 178 SEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAEL 257 (457)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTTSTTCSCSCBCGGGHHHHTTCBCSSTTCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhhccCCcCCCeeeEehHHHHHHHhhhcCCCCccHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCccCchhhhhhhHHHhhccCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchhHHHHHhhhHHHHHHHHHHH
Q psy15122 671 IEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLL 750 (927)
Q Consensus 671 v~~~~p~ll~f~~eL~~v~~Askvs~~~l~~~~~~L~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~F~~~a~~~~~~L 750 (927)
|+++||++++|.+||.+|..|++||+++|.+++++|.++++.++++++....+ .++.|.|..+|..|+..|..++..|
T Consensus 258 v~~~~p~l~~f~~eL~~v~~Aakvs~~~l~~dl~~L~~~l~~v~~~l~~~~~~--~~~~d~f~~~m~~Fl~~A~~~~~~L 335 (457)
T 3obv_E 258 CENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAA--TDEKDKFVEKMTSFVKDAQEQYNKL 335 (457)
T ss_dssp HHHHCGGGGGHHHHCTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHSCCCC--SSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCccccCChhhhhhHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCC--cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876544 5677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy15122 751 SNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLREAEEKSIRVREAREKAENEKKDKAARKK 830 (927)
Q Consensus 751 ~~~~~~~~~~~~~l~~yfgEd~~~~~~eefF~~~~~F~~~f~~a~~en~~~~e~eek~rr~~~akekaerek~er~~~kk 830 (927)
+..+..|.+.|.+++.||||||+++++++||++|.+|+..|++|++||++++++|++.+|+++|+|+|+|++.|++++++
T Consensus 336 ~~~~~~~~~~~~~l~~yFgedp~~~~~~eFF~~~~~F~~~fkkA~~eN~~r~e~eek~~r~~~a~e~~~~~~~e~~~~~~ 415 (457)
T 3obv_E 336 RMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQKRE 415 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCccchHHHHHHHHhc
Q psy15122 831 ALIDMTTDQTQQGVMDSLLEALQT 854 (927)
Q Consensus 831 ~~~~~~~~~~~~~v~D~Ll~~Lrs 854 (927)
++++++++++++||||+||++|||
T Consensus 416 ~~~~~~~~~~~~gv~D~Ll~~l~s 439 (457)
T 3obv_E 416 QLIDMNAEGDETGVMDSLLEALQS 439 (457)
T ss_dssp TSCCTTSCSCCCCHHHHHHHHHHH
T ss_pred hhhcccCCccccccHHHHHHHHhc
Confidence 999999989999999999999999
No 4
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=100.00 E-value=1.4e-50 Score=471.81 Aligned_cols=257 Identities=28% Similarity=0.499 Sum_probs=208.8
Q ss_pred CccccccccccccccccchhhhhchhHHHHHHHHHHhcccccCCCCCcccceeeecccccccccccC-CCCcchhHHHHH
Q psy15122 591 PEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDI-ENKTTLLHYLVD 669 (927)
Q Consensus 591 pe~v~~i~~~i~~v~~A~~el~~S~~f~~lL~~IL~iGNymN~gs~~g~A~GFkLssL~KL~dtKs~-d~k~TLLh~l~~ 669 (927)
++.+.+|+++|.++..||++|++|++|+.||++||++|||||+| .+|+|+||+|+||.||.||||+ |+++||||||++
T Consensus 189 ~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g-~rg~A~GFkL~sL~KL~d~Ks~~d~k~TLLhylv~ 267 (483)
T 2j1d_G 189 AERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKG-QRGNAYGFKISSLNKIADTKSSIDKNITLLHYLIT 267 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCS-SSCCCSCCCGGGGGGGGGSBCSSCTTCBHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhhhccC-CCCCceeeehHHHHhhhhcccCCCCCccHHHHHHH
Confidence 38899999999999999999999999999999999999999999 7899999999999999999995 999999999999
Q ss_pred HHHhhCCccCchhhhhhhHHHhhccCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchhHHHHHhhhHHHHHHHHHH
Q psy15122 670 TIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITL 749 (927)
Q Consensus 670 ~v~~~~p~ll~f~~eL~~v~~Askvs~~~l~~~~~~L~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~F~~~a~~~~~~ 749 (927)
+|+++||++++|.+||.+|..|++|++++|.+++++|.+++..++.+++...... .+++|.|..+|..|+..|..++..
T Consensus 268 ~v~~~~p~l~~f~~eL~~v~~Askv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~-~~~~d~f~~~m~~Fl~~a~~~~~~ 346 (483)
T 2j1d_G 268 IVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQP-PQPGDKFVSVVSQFITVASFSFSD 346 (483)
T ss_dssp HHHHHCGGGGGHHHHTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCchhhchHHHHhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998764321 357789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcccCCCCCcccchhccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 750 LSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLRE-AEEKSIRVREAREKAENEKKDKAAR 828 (927)
Q Consensus 750 L~~~~~~~~~~~~~l~~yfgEd~~~~~~eefF~~~~~F~~~f~~a~~en~~~~e-~eek~rr~~~akekaerek~er~~~ 828 (927)
|+..+..+.+.|.+++.||||||+++++++||++|.+|+..|++|++||.+.++ +|++++|++.+++..++..++|+++
T Consensus 347 L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~~~~~F~~~f~~A~~en~~~~~~~e~eekr~~~e~~~~~~~~~~r~~~ 426 (483)
T 2j1d_G 347 VEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEEEERRARMEAQLKEQRERERKMR 426 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999987433 2222233333322222223344443
Q ss_pred hhhhccCCCCCCccchHHHHHHHHhc
Q psy15122 829 KKALIDMTTDQTQQGVMDSLLEALQT 854 (927)
Q Consensus 829 kk~~~~~~~~~~~~~v~D~Ll~~Lrs 854 (927)
+ ...+++++||||+||++||+
T Consensus 427 ~-----~~~~~~~~g~~D~Ll~~Lr~ 447 (483)
T 2j1d_G 427 K-----AKENSEESGEFDDLVSALRS 447 (483)
T ss_dssp H-----C-------------------
T ss_pred c-----CCCCCcccccHHHHHHHHhC
Confidence 3 12346788999999999999
No 5
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=100.00 E-value=6.4e-49 Score=439.23 Aligned_cols=234 Identities=46% Similarity=0.752 Sum_probs=199.0
Q ss_pred CccccccccccccccccchhhhhchhHHHHHHHHHHhcccccCCCCCcccceeeecccccccccccCCCCcchhHHHHHH
Q psy15122 591 PEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYLVDT 670 (927)
Q Consensus 591 pe~v~~i~~~i~~v~~A~~el~~S~~f~~lL~~IL~iGNymN~gs~~g~A~GFkLssL~KL~dtKs~d~k~TLLh~l~~~ 670 (927)
++.+.+|+++|.++..||++|++|++|+.||++||++|||||+|+++|+|+||+|+||.||.||||+|+++||||||+++
T Consensus 107 ~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~KL~d~Ks~d~k~TLLh~lv~~ 186 (340)
T 1v9d_A 107 SEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAEL 186 (340)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------CCHHHHHHSBCSSTTSBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHcCcCCCCCCCCceeeeehHHHHhhhhhcCCCCCccHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCccCchhhhhhhHHHhhccCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchhHHHHHhhhHHHHHHHHHHH
Q psy15122 671 IEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLL 750 (927)
Q Consensus 671 v~~~~p~ll~f~~eL~~v~~Askvs~~~l~~~~~~L~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~F~~~a~~~~~~L 750 (927)
|+++||++++|.+||.+|..|++||+++|.+++.+|.+++..++.+++..... .++.|.|..+|.+|+..|..++..|
T Consensus 187 ~~~~~p~l~~f~~eL~~v~~Askvs~~~l~~~l~~l~~~~~~~~~~l~~~~~~--~~~~d~f~~~m~~Fl~~a~~~~~~l 264 (340)
T 1v9d_A 187 CENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAA--TDEKDKFVEKMTSFVKDAQEQYNKL 264 (340)
T ss_dssp HHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCCC--SSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCchhccchhHHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcccc--cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999876433 5678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 751 SNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLREAEEKSIRVREAREKAENEKKDKA 826 (927)
Q Consensus 751 ~~~~~~~~~~~~~l~~yfgEd~~~~~~eefF~~~~~F~~~f~~a~~en~~~~e~eek~rr~~~akekaerek~er~ 826 (927)
+..+..+.+.|.+++.||||||+++++++||++|.+|+..|++|++||.+++++|++.||+++|+|++++++.||+
T Consensus 265 ~~~~~~~~~~~~~l~~yfged~~~~~~~~fF~~~~~F~~~f~~a~~en~~r~e~eek~~~~~~~~e~~~~~~~~~~ 340 (340)
T 1v9d_A 265 RMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQ 340 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988876653
No 6
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=100.00 E-value=2.8e-45 Score=388.98 Aligned_cols=229 Identities=38% Similarity=0.723 Sum_probs=207.6
Q ss_pred ChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhhhhhhhhhhcchhhhcCcCCCCCCCc--chhhHHHHHH
Q psy15122 135 KPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVLQDNKNFRKYPIAFLYPRFPSRSRND--SRYDRVQYEC 212 (927)
Q Consensus 135 ~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~~Gl~~Ll~~~l~~ll~~l~~~~~~~--~~~~~~~~e~ 212 (927)
+|+|||++|+++ .+.+.++++|++|||+|||+|++||++|+.+|+++|+++ |..+.. +.... ..+...+|+|
T Consensus 1 ~P~~yi~~L~~~-~~~~~~~~~L~~L~v~Lrt~~~~Wv~~F~~~Gl~~L~~~-L~~~~~----~~~~~~~~~~~~~~~~~ 74 (233)
T 2f31_A 1 SAMMYIQELRSG-LRDMHLLSCLESLRVSLNNNPVSWVQTFGAEGLASLLDI-LKRLHD----EKEETSGNYDSRNQHEI 74 (233)
T ss_dssp CHHHHHHHHTTT-CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH-HHHHHT----CC-----CCHHHHHHHH
T ss_pred CHHHHHHHHHhc-cchHHHHHHHHHHhHhHhcCCcHHHHHHHHhHHHHHHHH-HHHHHh----cccccchhhhHHHHHHH
Confidence 699999999887 356678899999999999999999999988999999995 333221 11111 3367789999
Q ss_pred HHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCC-Cc-hHHHHHHHHhhcccccCcChHH
Q psy15122 213 VRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPP-DG-HDKVIKAITMSGELKGKERFQP 290 (927)
Q Consensus 213 vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~-~G-h~~VL~Al~~~~~~~e~~RF~~ 290 (927)
|+|||||||+++|++.|+.|+++|+.|+.++++++++++++|+|+|+++|+++. +| |++||+||++++..+++.||++
T Consensus 75 l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL~Al~~~~~~~e~~RF~~ 154 (233)
T 2f31_A 75 IRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQP 154 (233)
T ss_dssp HHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHHHHHHHHHHHHTSCTTHH
T ss_pred HHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHhCCcchHHH
Confidence 999999999999999999999999999999999999999999999999999985 49 9999999999988899999999
Q ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChhHHHHHHHHhhhhHhHHHHH
Q psy15122 291 VVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASEDVSVQLKVFIEHKEEDYYEF 370 (927)
Q Consensus 291 lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~L~~ql~~f~~~~~~D~~el 370 (927)
||++| ....+.+|+++||.|||+||++++|+++|+|||+||.++||.+++++|+..++++|++||++|++.+++|++||
T Consensus 155 lv~~l-~~~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~il~~l~~~~~~~L~~Qi~~fe~~~~eD~~el 233 (233)
T 2f31_A 155 LLDGL-KSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDL 233 (233)
T ss_dssp HHHTT-STTSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHH-hcCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHHHHHHhccCCHHHHHHHHHHHHHHHhCHhhC
Confidence 99999 45678999999999999999999999999999999999999999999999999999999999999999999885
No 7
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=100.00 E-value=2.5e-42 Score=395.80 Aligned_cols=215 Identities=25% Similarity=0.374 Sum_probs=201.9
Q ss_pred CCccccccccccccccccchhhhhchhHHHHHHHHHHhcccccCCCCCcccceeeecccccccccccCCCCcchhHHHHH
Q psy15122 590 MPEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYLVD 669 (927)
Q Consensus 590 lpe~v~~i~~~i~~v~~A~~el~~S~~f~~lL~~IL~iGNymN~gs~~g~A~GFkLssL~KL~dtKs~d~k~TLLh~l~~ 669 (927)
+++.+.+|+++|.++..||++|++|++|++||++||++|||||+|++ +|+||+|+||.||.||||+|+++||||||++
T Consensus 189 f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~--~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~ 266 (411)
T 1ux5_A 189 YEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSK--QAQGFKLSTLQRLTFIKDTTNSMTFLNYVEK 266 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGG--CCSCCCGGGGGGSSSCBCTTSCSBHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhCcccCCCC--CeeEeehhHHHHHHHhhCCCCCccHHHHHHH
Confidence 44889999999999999999999999999999999999999999986 7999999999999999999999999999999
Q ss_pred HHHhhCCccCchhhhhhhHHHhhccCHHHHHHHHHHHHHHHHHHHHHHhhhccC--CCCCcchhHHHHHhhhHHHHHHHH
Q psy15122 670 TIEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQA--PVANENDKFLEIMEPFAKEVRQKI 747 (927)
Q Consensus 670 ~v~~~~p~ll~f~~eL~~v~~Askvs~~~l~~~~~~L~~~l~~l~~~l~~~~~~--~~~~~~D~f~~~m~~F~~~a~~~~ 747 (927)
+|+++||++++|.+||++|..|++|++++|.+++++|.+++..++++++....+ ...+++|.|..+|.+|+..|..++
T Consensus 267 ~v~~~~p~l~~f~~eL~~v~~Aakv~~~~l~~d~~~L~~~l~~v~~~l~~~~~s~~~~~~~~d~f~~~~~~fl~~a~~~~ 346 (411)
T 1ux5_A 267 IVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLSDSSKFHPLDKVLIKTLPVLPEARKKG 346 (411)
T ss_dssp HHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTTCTTSSCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcccccccchhhhHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999864322 123677899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCC-CCcccchhccHHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 748 TLLSNMSKNMMTLYGDLAEFYTFDKN-IYTLEEFFTDIKTFKDSFYQAWQENIKLREAEE 806 (927)
Q Consensus 748 ~~L~~~~~~~~~~~~~l~~yfgEd~~-~~~~eefF~~~~~F~~~f~~a~~en~~~~e~ee 806 (927)
..|+..++.+.+.|.+++.||||||+ ++++++||++|.+|+..|++|++||.+++|+++
T Consensus 347 ~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~~fF~~~~~F~~~f~~a~~en~~~~e~~~ 406 (411)
T 1ux5_A 347 DLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYKKAQAQNLAAEEEER 406 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 478999999999999999999999998877654
No 8
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=100.00 E-value=1.4e-41 Score=386.42 Aligned_cols=206 Identities=27% Similarity=0.403 Sum_probs=193.1
Q ss_pred CccccccccccccccccchhhhhchhHHHHHHHHHHhcccccCCCCCcccceeeecccccccccccCCCCcchhHHHHHH
Q psy15122 591 PEMYTDCHKNIINGKQACEEVKQSKKLAKILELILLMGNYMNSGSRNGGAFGFEINFLTKLSSTKDIENKTTLLHYLVDT 670 (927)
Q Consensus 591 pe~v~~i~~~i~~v~~A~~el~~S~~f~~lL~~IL~iGNymN~gs~~g~A~GFkLssL~KL~dtKs~d~k~TLLh~l~~~ 670 (927)
++.+.+|+++|.++..||++|++|++|+.||++||++|||||+| .+|+|+||+|+||.||.||||+|+++||||||+++
T Consensus 185 ~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g-~rg~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~ 263 (402)
T 4eah_A 185 QDNLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSS-KRGAVYGFKLQSLDLLLDTKSTDRKMTLLHFIALT 263 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCS-SSCCCSCBCGGGGGSSSSSBCTTSSSBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhccCC-CCCccceeeHHHHHHHHhccCCCCCccHHHHHHHH
Confidence 38899999999999999999999999999999999999999998 67999999999999999999999999999999999
Q ss_pred HHhhCCccCchhhhhhhHHHhhccCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchhHHHHHhhhHHHHHHHHHHH
Q psy15122 671 IEQKFPECLKFGDELLHVDRAARVSTDVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLL 750 (927)
Q Consensus 671 v~~~~p~ll~f~~eL~~v~~Askvs~~~l~~~~~~L~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~F~~~a~~~~~~L 750 (927)
|+++||++++|.+||.+|..|++||+++|.+++++|.+++..+++++... + ..+|..|+..|..++..|
T Consensus 264 ~~~~~p~l~~f~~eL~~v~~Aa~v~~~~l~~d~~~L~~~l~~~~~e~~~~------d-----~~~l~~Fl~~a~~~~~~L 332 (402)
T 4eah_A 264 VKEKYPELANFWQELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIH------D-----NSVLRNFLSTNEGKLDKL 332 (402)
T ss_dssp HHHHCGGGGTCSTTCCSHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTT------C-----CTTTHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHhhhhhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhccc------c-----hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887531 1 137999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcccCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 751 SNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLREAEEKS 808 (927)
Q Consensus 751 ~~~~~~~~~~~~~l~~yfgEd~~~~~~eefF~~~~~F~~~f~~a~~en~~~~e~eek~ 808 (927)
+..++.+.+.|.+++.||||||+++++++||++|.+|+..|++|++||++|+++|+..
T Consensus 333 ~~~~~~~~~~~~~l~~yFgedpk~~~~~~fF~~~~~F~~~fk~A~~en~~r~~~e~~~ 390 (402)
T 4eah_A 333 QRDAKTAEEAYNAVVRYFGESPKTTPPSVFFPVFVRFIRSYKEAEQENEARKKQEEVM 390 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988877643
No 9
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=99.73 E-value=1.6e-18 Score=196.07 Aligned_cols=275 Identities=19% Similarity=0.262 Sum_probs=177.4
Q ss_pred HHhhcCCHHHHHHHHHHhhccCCCCcccccccccCchhhhhhhhhhccccc-----cccccccchhhhccCCCHHHHHHH
Q psy15122 12 NMLEKLNPEQLNQKFEDMLNDMNLSDEKKEPLRRQPLANKKKMLLMHYKGT-----VTSYENKKQENMLEKLNPEQLNQK 86 (927)
Q Consensus 12 ~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~K~~m~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ei~~~ 86 (927)
..+++|||+||+++|++||+|||++++||+|||.+|.++|++||.+|.+++ ..+...+|.+|+....+. -...+
T Consensus 5 ~~~~~~se~ev~~~F~~mL~~mnl~~ek~~~l~~~~~e~Kw~mi~~~~~~~~~~~~~~~~~~sP~~yi~~L~~~-~~~~k 83 (383)
T 3eg5_B 5 QSLQDISDEQVLVLFEQMLVDMNLNEEKQQPLREKDIVIKREMVSQYLHTSKAGMNQKESSRSAMMYIQELRSG-LRDMH 83 (383)
T ss_dssp ----------CCHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHHHHHHHC---------CCCHHHHHHHHTTT-CCHHH
T ss_pred hhcccCCHHHHHHHHHHHHHHcCCCHHHHHHHHhCCHHHHHHHHHHHHHHhhhccccccCCCCHHHHHHHHHhc-ccchh
Confidence 457789999999999999999999999999999999999999999998652 234466788887765533 12334
Q ss_pred HHHHHHhCCCChhhhhhhhCCChHhHHHHHHHHHhccccccccccCCCChHHHHHHhc----CC-----ccchhhhhhhH
Q psy15122 87 FEDMLNDMNLSDEKKEPLRRQPLANKKKMLLMHYKGTVTSYENKSKFDKPIEYIQYLS----QP-----ELSVNKMYSCI 157 (927)
Q Consensus 87 F~~lle~lnl~~~k~~~L~~~p~~~K~~li~~~~~~~~~~~~~~~~~~~P~~~i~~L~----~~-----~~~~~~~~~~l 157 (927)
..++|++|.+. |++.|. +|+..|...+...++..|. .+ .......+.||
T Consensus 84 l~~~L~sL~v~------Lrt~~~----------------sWV~~F~~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l 141 (383)
T 3eg5_B 84 LLSCLESLRVS------LTSHPV----------------SWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEII 141 (383)
T ss_dssp HHHHHHHHHHH------HHHSCH----------------HHHHHHHHHHHHHHHHHHHHHHTCC-------CHHHHHHHH
T ss_pred HHHHHHHHHHH------HhhCcc----------------HHHHHHHHccHHHHHHHHHHHhhccccccchhhHHHHHHHH
Confidence 45788888777 888888 7777776666766666663 11 11235778999
Q ss_pred HHHHHHhccCCchhHHHHhh---hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHHHHHHHHhcHh---hHHHHhc
Q psy15122 158 ESLRIALTNHPLSWVNEFVL---QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVRCIRAIMNNTV---GLKQMFG 231 (927)
Q Consensus 158 ~~Lrv~L~t~~~sWv~~F~~---~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vkCLkaimN~~~---Gl~~vl~ 231 (927)
+|||+.|++ .++.+.+. +++..|.. .+ +.....+...++..|-++|.... |+..|+
T Consensus 142 ~CLkalmN~---~~G~~~vl~~~~~i~~l~~--------~L------~s~~~~~~~~aleLL~~lc~~~~~~gG~~~VL- 203 (383)
T 3eg5_B 142 RCLKAFMNN---KFGIKTMLETEEGILLLVR--------AM------DPAVPNMMIDAAKLLSALCILPQPEDMNERVL- 203 (383)
T ss_dssp HHHHHHTSS---HHHHHHHHTCSSHHHHHHH--------TC------CTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHH-
T ss_pred HHHHHHhcc---hhhHHHHHcChHHHHHHHH--------Hh------CCCchHHHHHHHHHHHHHHhCcCcCCcHHHHH-
Confidence 999999999 77777663 34444322 23 22224455678899999999875 699988
Q ss_pred chhHHHHHHHhcCCCChhHHHHHHHH-----hhhhcccCCCchHHHHHHHHhhcccccCcChHHHHHHHhccCCCHHHHH
Q psy15122 232 QKEALTIVARSLDPNKPTVMLEAVKV-----LAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQGLMVKGNNEALRT 306 (927)
Q Consensus 232 ~~~~i~~la~sl~~~~~~~~~~vlel-----Laalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~~~~~~ 306 (927)
+|++....+-...++......++- +.+.|+. +|+++.+..+- ..+|.+.++...+.
T Consensus 204 --~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~~~m~-------lIN~li~~~~d----------l~~R~~lR~ef~~~ 264 (383)
T 3eg5_B 204 --EAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQ-------LINALITPAEE----------LDFRVHIRSELMRL 264 (383)
T ss_dssp --HHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHH-------HHHHHHTTCCC----------HHHHHHHHHHHHHT
T ss_pred --HHHHHHHHhCCCCcHHHHHHHHHccCcHHHHHHHHH-------HHHHHHcCCCC----------HHHHHHHHHHHHHC
Confidence 456655554455566654433221 2222332 55665554210 01112223344556
Q ss_pred HHHHHHHHHHc-CchhHHHHHHHHHHHHHhChHHHHHHHhh
Q psy15122 307 ACLQLINAIVA-TPDDLEFRLHLRNEIMRVGLYDLLDALEK 346 (927)
Q Consensus 307 ~~m~lIN~Lv~-s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~ 346 (927)
++...|..+-. ..+++..++.++.+....+..++.+++..
T Consensus 265 Gl~~il~~lr~~~~~~L~~Qi~~fe~~~~eD~~el~~r~~~ 305 (383)
T 3eg5_B 265 GLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDD 305 (383)
T ss_dssp THHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHhcCCChhHHHHHHHHHHHHHHhHHHHHhhccc
Confidence 67777777633 47899999999999999999988887743
No 10
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=99.56 E-value=9.2e-14 Score=151.01 Aligned_cols=211 Identities=16% Similarity=0.169 Sum_probs=176.8
Q ss_pred ChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHh-hhhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHH
Q psy15122 135 KPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFV-LQDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECV 213 (927)
Q Consensus 135 ~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~-~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~v 213 (927)
....++.+|.+.+ .+.+...|-+|+..+. ....|+.+|+ .+|+..|+.+ . + ..+...|..++
T Consensus 119 ra~~iiekL~~~~--~~~lr~aLfsLk~~~q-~D~~Fa~EFI~~~GL~~Li~v----i-~---------~~~gN~q~Y~L 181 (339)
T 3dad_A 119 RVNAILEKLYSSS--GPELRRSLFSLKQIFQ-EDKDLVPEFVHSEGLSCLIRV----G-A---------AADHNYQSYIL 181 (339)
T ss_dssp HHHHHHHHHHHCC--HHHHHHHHHHHHHHHH-TCTTHHHHHHHTTHHHHHHHH----H-T---------TSCHHHHHHHH
T ss_pred HHHHHHHHHhcCC--cHHHHHHHHHHHHHhh-cchHHHHHHHHhccHHHHHHH----H-H---------hcChHHHHHHH
Confidence 3466777776543 3344566788887554 4579999999 5899999885 2 2 12456789999
Q ss_pred HHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHH
Q psy15122 214 RCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQ 293 (927)
Q Consensus 214 kCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~ 293 (927)
++|..||..-+|++.|++|++.|..|+..+++....+...+|+||-++|.+++.|+..|..|++.+....+..+|+.+|.
T Consensus 182 ~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~s~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~ 261 (339)
T 3dad_A 182 RALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVS 261 (339)
T ss_dssp HHHHHHTTSHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHH
T ss_pred HHHHHHHhccccccchhCCHHHHHHHHHHHcCccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHH
Confidence 99999999999999999999999999999988777777889999999999998899999999999876678888999999
Q ss_pred HHh-ccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHH-Hhhc-CChhHHHHHHHHhhh
Q psy15122 294 GLM-VKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDA-LEKD-ASEDVSVQLKVFIEH 362 (927)
Q Consensus 294 ~L~-~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~-L~~~-~~~~L~~ql~~f~~~ 362 (927)
-|. +...+.++++.+|.|||+++...+|-+-|-++..++...|+..++.+ |... .+.+|..|+.+|+..
T Consensus 262 ~L~~~~~~D~elq~~amtLIN~lL~~apd~d~~~di~d~Le~~gi~~~i~r~l~~~~~~~~l~~Ql~iyE~~ 333 (339)
T 3dad_A 262 ILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGTAGTDVDLRTQLVLYENA 333 (339)
T ss_dssp HHTTTTSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHTTHHHHHHHHHSCTTSCHHHHHHHHHHHHH
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHccHHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 993 23579999999999999999988888878899999999999999987 5544 577999999999974
No 11
>4dvg_B Diaphanous protein; cytoskeleton, armadillo repeat, GTPase-binding domain, nucle binding, signaling protein, lipoprotein; HET: GSP; 2.60A {Entamoeba histolytica}
Probab=99.16 E-value=7e-09 Score=102.12 Aligned_cols=280 Identities=17% Similarity=0.312 Sum_probs=193.8
Q ss_pred CCHHH-HHHHHHHHHHhCCCChhhhhhhhCCChHhHHHHHHHHHhccc------------cccccccCCCChHHHHHHhc
Q psy15122 78 LNPEQ-LNQKFEDMLNDMNLSDEKKEPLRRQPLANKKKMLLMHYKGTV------------TSYENKSKFDKPIEYIQYLS 144 (927)
Q Consensus 78 ~~~~e-i~~~F~~lle~lnl~~~k~~~L~~~p~~~K~~li~~~~~~~~------------~~~~~~~~~~~P~~~i~~L~ 144 (927)
|+++| +.++|.-+..+|.+.- -.-..+-..|.+++.|..++. +.|.+ .-..|.++.+.|+
T Consensus 4 mppeevvqqkfaivakemkidn-----pelitipnqwklvqeyekkqkkdiriqlnaqktgnwrn--aitdpkyladllk 76 (353)
T 4dvg_B 4 MPPEEVVQQKFAIVAKEMKIDN-----PELITIPNQWKLVQEYEKKQKKDIRIQLNAQKTGNWRN--AITDPKYLADLLK 76 (353)
T ss_dssp ----CCCCGGGHHHHHHTTCSC-----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HTTSHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhcCCC-----cceEecccHHHHHHHHHHhhccceEEEecchhcCChhh--ccCChHHHHHHHh
Confidence 43444 6678999999998763 122346678999999876632 44442 2346777777776
Q ss_pred CCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHHHHHHHHhcH
Q psy15122 145 QPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVRCIRAIMNNT 223 (927)
Q Consensus 145 ~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vkCLkaimN~~ 223 (927)
..+- ...|...-|..|+.+++|++-|+. +|+..|+.+ +. ..+... +....-.-+..|-..||-+.--.
T Consensus 77 trdd-----mdllnemvvvfrsssvsfiktfvsvgglanlmai-yk---kkieae--nsntaideerkccevlryvfaee 145 (353)
T 4dvg_B 77 TRDD-----MDLLNEMVVVFRSSSVSFIKTFVSVGGLANLMAI-YK---KKIEAE--NSNTAIDEERKCCEVLRYVFAEE 145 (353)
T ss_dssp TCCC-----HHHHHHHHHHHHHSCHHHHHHHHHTSTHHHHHHH-HH---HHHHSC--CCHHHHHHHHHHHHHHHHHTTSH
T ss_pred ccch-----HHHhhhheEEEeccchhHHHHHhhhccHHHHHHH-HH---HHhhcc--ccccchhhHHHHHHHHHHHHhcc
Confidence 5432 235677888899999999999995 788877663 21 111000 11111122455767777666666
Q ss_pred hhHHHHhcchhHHHHHHHhcCCCChhHHHH---HHHHhhhhcccCC--------CchHHHHHHHHhhcccc-cCcChHHH
Q psy15122 224 VGLKQMFGQKEALTIVARSLDPNKPTVMLE---AVKVLAAVCLIPP--------DGHDKVIKAITMSGELK-GKERFQPV 291 (927)
Q Consensus 224 ~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~---vlelLaalc~~~~--------~Gh~~VL~Al~~~~~~~-e~~RF~~l 291 (927)
.....++.-...+..+...+++.+..+--+ .+|+-..-+++.. +|.-.|++||.+.-..+ .-..|-+.
T Consensus 146 datvalieidggvelllkgmnskritpdnqldilleitltssmvehpsqeglylggdvcvmnafsnlvsegvdmkkflsf 225 (353)
T 4dvg_B 146 DATVALIEIDGGVELLLKGMNSKRITPDNQLDILLEITLTSSMVEHPSQEGLYLGGDVCVMNAFSNLVSEGVDMKKFLSF 225 (353)
T ss_dssp HHHHHHHTSTTHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHCSBCTTSTTCBCCHHHHHHHHHHHHHHTTSCSSTTHHH
T ss_pred cceEEEEEecccHHHHhcccccCcCCCccccceeeeEeehhhhhcCccccceeecCceeeehhhHHHHhccccHHHHHHH
Confidence 666666666677888888888887766432 3455222233321 47788999998886443 45668887
Q ss_pred HHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCC---hhHHHHHHHHhhhhHhHHH
Q psy15122 292 VQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDAS---EDVSVQLKVFIEHKEEDYY 368 (927)
Q Consensus 292 v~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~---~~L~~ql~~f~~~~~~D~~ 368 (927)
...+ +...++.++.+.+.+||.||..| +++-|+.+|+.|...||..-++.+++.++ +.+...|.-|-...++|-.
T Consensus 226 fslf-sksksekfkhaslvlinnlidqp-elehrmdvrnsfieiglvnelenmkntewmkidkikdsindffdsweedkk 303 (353)
T 4dvg_B 226 FSLF-SKSKSEKFKHASLVLINNLIDQP-ELEHRMDVRNSFIEIGLVNELENMKNTEWMKIDKIKDSINDFFDSWEEDKK 303 (353)
T ss_dssp HHHH-HHCCCHHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHTTTHHHHHHHHHTSGGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-hhhhhhhcccceeehhhccccch-hhHhhhhhhhhheeeehhhHhhhccCccceehhhHHhhHHHHHhhHHhhHH
Confidence 7766 67889999999999999998776 59999999999999999999999998544 5566677778778889999
Q ss_pred HHHHhchhc
Q psy15122 369 EFIQRFDNV 377 (927)
Q Consensus 369 el~~r~~~~ 377 (927)
|.-.||++.
T Consensus 304 evesrfddl 312 (353)
T 4dvg_B 304 EVESRFDDL 312 (353)
T ss_dssp HHHHHHTTC
T ss_pred HHHHhhhhH
Confidence 999999763
No 12
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=98.35 E-value=1.4e-07 Score=106.66 Aligned_cols=220 Identities=16% Similarity=0.206 Sum_probs=138.2
Q ss_pred cccchhhhccCCCHHHHHHHHHHHHHhCCCChhhhhhhhCCChHhHHHHHHHHHhccccccccccCCCChHHHHHHhc--
Q psy15122 67 ENKKQENMLEKLNPEQLNQKFEDMLNDMNLSDEKKEPLRRQPLANKKKMLLMHYKGTVTSYENKSKFDKPIEYIQYLS-- 144 (927)
Q Consensus 67 ~~~~~~~~~~~~~~~ei~~~F~~lle~lnl~~~k~~~L~~~p~~~K~~li~~~~~~~~~~~~~~~~~~~P~~~i~~L~-- 144 (927)
+.+|..|+...++. .....+.++|.+|.+. |++.|. +|+..|...+-...+..|.
T Consensus 3 ~~~P~~yv~~L~~~-~~~~~~~~~L~~L~v~------Lrt~~~----------------~Wv~~F~~~Gl~~Ll~~L~~~ 59 (386)
T 2bnx_A 3 SRSAMMYIQELRSG-LRDMHLLSCLESLRVS------LNNNPV----------------SWVQTFGAEGLASLLDILKRL 59 (386)
T ss_dssp CCCHHHHHHHHTSC-CCHHHHHHHHHHHHHH------HHHSCH----------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhc-cchHHHHHHHHHHhHH------HhcCCc----------------HHHHHHHHhHHHHHHHHHHHH
Confidence 45677776665533 2233467788888888 898888 6776665555555555442
Q ss_pred --CC-----ccchhhhhhhHHHHHHHhccCCchhHHHHhh---hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHH
Q psy15122 145 --QP-----ELSVNKMYSCIESLRIALTNHPLSWVNEFVL---QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVR 214 (927)
Q Consensus 145 --~~-----~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~---~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vk 214 (927)
.+ .......+.|++|||..|++ .++.+.+. .++..|. ..+ +.....+...++.
T Consensus 60 ~~~~~~~~~~~d~~~~~~~l~CLkalmN~---~~Gl~~vl~~~~~i~~l~--------~sL------~s~~~~~r~~vle 122 (386)
T 2bnx_A 60 HDEKEETSGNYDSRNQHEIIRCLKAFMNN---KFGIKTMLETEEGILLLV--------RAM------DPAVPNMMIDAAK 122 (386)
T ss_dssp HTCCTTTCCTTHHHHHHHHHHHHHHHTSS---HHHHHHHHHSSSHHHHHH--------HTC------CTTSHHHHHHHHH
T ss_pred HhcccccccchhHHHHHHHHHHHHHHhCC---HHHHHHHHcCcHHHHHHH--------HHh------CCCCchHHHHHHH
Confidence 11 11234678999999999999 78777763 3444332 223 2222345556888
Q ss_pred HHHHHHhcHh--h-HHHHhcchhHHHHHHHhcCCCChhHHHHHHHH-----hhhhcccCCCchHHHHHHHHhhcccccCc
Q psy15122 215 CIRAIMNNTV--G-LKQMFGQKEALTIVARSLDPNKPTVMLEAVKV-----LAAVCLIPPDGHDKVIKAITMSGELKGKE 286 (927)
Q Consensus 215 CLkaimN~~~--G-l~~vl~~~~~i~~la~sl~~~~~~~~~~vlel-----Laalc~~~~~Gh~~VL~Al~~~~~~~e~~ 286 (927)
-|-++|.... | +..|+ ++++....+-...++.+.+..++- +.+.|+. +|+++.+...
T Consensus 123 LL~alc~~~~~~G~~~~VL---~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~a~m~-------lIN~lv~~~~----- 187 (386)
T 2bnx_A 123 LLSALCILPQPEDMNERVL---EAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQ-------LINALITPAE----- 187 (386)
T ss_dssp HHHHHHTCCSSTTHHHHHH---HHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHHHHHH-------HHHHHHTTCS-----
T ss_pred HHHHHHcCCCCCChHHHHH---HHHHHHHHhCchhhHHHHHHHHHcCChHHHHHHHHH-------HHHHHHCCCC-----
Confidence 8899999876 8 88887 455555555455566654443320 2233333 5666655421
Q ss_pred ChHHHHHHHhccCCCHHHHHHHHHHHHHHHc-CchhHHHHHHHHHHHHHhChHHHHHHHhh
Q psy15122 287 RFQPVVQGLMVKGNNEALRTACLQLINAIVA-TPDDLEFRLHLRNEIMRVGLYDLLDALEK 346 (927)
Q Consensus 287 RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~-s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~ 346 (927)
.-.+|.+.++.....++...|..|-. ..++++.++.++.+....+..++.+++.+
T Consensus 188 -----dl~~R~~LR~Ef~~~GL~~il~~Lr~~~~~~L~~Qi~~fe~~~~eD~~el~~r~~~ 243 (386)
T 2bnx_A 188 -----ELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDD 243 (386)
T ss_dssp -----CHHHHHHHHHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHCChHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 01122233445566777777777743 56899999999999999999888887654
No 13
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=97.46 E-value=3.9e-05 Score=80.69 Aligned_cols=195 Identities=16% Similarity=0.230 Sum_probs=119.5
Q ss_pred HHHHHHHhCCCChhhhhhhhCCChHhHHHHHHHHHhccccccccccCCCChHHHHHHhc----CC-----ccchhhhhhh
Q psy15122 86 KFEDMLNDMNLSDEKKEPLRRQPLANKKKMLLMHYKGTVTSYENKSKFDKPIEYIQYLS----QP-----ELSVNKMYSC 156 (927)
Q Consensus 86 ~F~~lle~lnl~~~k~~~L~~~p~~~K~~li~~~~~~~~~~~~~~~~~~~P~~~i~~L~----~~-----~~~~~~~~~~ 156 (927)
.+.++|.++.++ |++.|. +|+.+|...+-...+..|. .+ .......++|
T Consensus 17 ~~~~~L~~L~v~------Lrt~~~----------------~Wv~~F~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~ 74 (233)
T 2f31_A 17 HLLSCLESLRVS------LNNNPV----------------SWVQTFGAEGLASLLDILKRLHDEKEETSGNYDSRNQHEI 74 (233)
T ss_dssp HHHHHHHHHHHH------HHHSCH----------------HHHHHHHHHHHHHHHHHHHHHHTCC-----CCHHHHHHHH
T ss_pred HHHHHHHHHhHh------HhcCCc----------------HHHHHHHHhHHHHHHHHHHHHHhcccccchhhhHHHHHHH
Confidence 456778888777 888887 6776665555555555542 11 1134567899
Q ss_pred HHHHHHHhccCCchhHHHHhh---hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHHHHHHHHhcHh--h-HHHHh
Q psy15122 157 IESLRIALTNHPLSWVNEFVL---QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVRCIRAIMNNTV--G-LKQMF 230 (927)
Q Consensus 157 l~~Lrv~L~t~~~sWv~~F~~---~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vkCLkaimN~~~--G-l~~vl 230 (927)
++|||+.+++ .++.+.+. +++..| ...+ +.........++..|-++|.... | +..|+
T Consensus 75 l~CLkalmn~---~~G~~~vl~~~~~i~~l--------~~~L------~s~~~~~r~~~leLL~~lc~~~~~~G~~~~VL 137 (233)
T 2f31_A 75 IRCLKAFMNN---KFGIKTMLETEEGILLL--------VRAM------DPAVPNMMIDAAKLLSALCILPQPEDMNERVL 137 (233)
T ss_dssp HHHHHHHTSS---HHHHHHHHTSSSHHHHH--------HTTC------CTTSHHHHHHHHHHHHHHHTCSSSSCHHHHHH
T ss_pred HHHHHHHhCC---hHHHHHHHcCcHHHHHH--------HHHh------CCCCchHHHHHHHHHHHHHhCCCCCChHHHHH
Confidence 9999999999 78777763 334333 2233 22223455668899999999876 8 99987
Q ss_pred cchhHHHHHHHhcCCCChhHHHHHHHH-----hhhhcccCCCchHHHHHHHHhhcccccCcChHHHHHHHhccCCCHHHH
Q psy15122 231 GQKEALTIVARSLDPNKPTVMLEAVKV-----LAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQGLMVKGNNEALR 305 (927)
Q Consensus 231 ~~~~~i~~la~sl~~~~~~~~~~vlel-----Laalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~~~~~ 305 (927)
++++....+-...++.+....++- +.+.|+. +++++.+..+ .-.+|.+.+++..+
T Consensus 138 ---~Al~~~~~~~e~~RF~~lv~~l~~~~~~e~~~~~m~-------lIN~li~~~~----------dl~~R~~lR~ef~~ 197 (233)
T 2f31_A 138 ---EAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQ-------LINALITPAE----------ELDFRVHIRSELMR 197 (233)
T ss_dssp ---HHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHH-------HHHHHHTTCC----------CHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCcchHHHHHHHHhcCChHHHHHHHHH-------HHHHHHCCCC----------CHHHHHHHHHHHHH
Confidence 455555544455566554433210 2222332 5566555421 00112233344556
Q ss_pred HHHHHHHHHHH-cCchhHHHHHHHHHHHHHhChHH
Q psy15122 306 TACLQLINAIV-ATPDDLEFRLHLRNEIMRVGLYD 339 (927)
Q Consensus 306 ~~~m~lIN~Lv-~s~~dl~~Ri~lR~Ef~~~GL~e 339 (927)
.+....|..+- ...++++.++.++.+.+..+..|
T Consensus 198 ~Gl~~il~~l~~~~~~~L~~Qi~~fe~~~~eD~~e 232 (233)
T 2f31_A 198 LGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFD 232 (233)
T ss_dssp TTHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHhccCCHHHHHHHHHHHHHHHhCHhh
Confidence 67777777774 36789999999999988766554
No 14
>2v8f_C MDIA1, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus}
Probab=94.93 E-value=0.014 Score=37.58 Aligned_cols=7 Identities=86% Similarity=2.299 Sum_probs=2.6
Q ss_pred CCCCCCC
Q psy15122 574 PPPPPMP 580 (927)
Q Consensus 574 ppppp~p 580 (927)
|||||.|
T Consensus 14 PpPpplP 20 (26)
T 2v8f_C 14 PPPPPLP 20 (26)
T ss_pred CCCCCCC
Confidence 3333333
No 15
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=93.91 E-value=0.052 Score=61.93 Aligned_cols=14 Identities=14% Similarity=0.271 Sum_probs=7.3
Q ss_pred HHHHHHH-HHHHcCch
Q psy15122 306 TACLQLI-NAIVATPD 320 (927)
Q Consensus 306 ~~~m~lI-N~Lv~s~~ 320 (927)
-+++.|| |-| .+++
T Consensus 274 e~A~~fl~~~l-~s~e 288 (449)
T 3iot_A 274 ELAKEFLENYL-LTDE 288 (449)
T ss_dssp HHHHHHHHHTT-SSHH
T ss_pred HHHHHHHHHHh-cCHH
Confidence 3556777 344 3443
No 16
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=93.88 E-value=2 Score=43.87 Aligned_cols=175 Identities=14% Similarity=0.189 Sum_probs=109.3
Q ss_pred CCChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHH
Q psy15122 133 FDKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYE 211 (927)
Q Consensus 133 ~~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e 211 (927)
...-.+|+..|.+++. ......+..|+..+.. .-.....++. +|+..|+.+ | . + .+..++..
T Consensus 11 ~~~~~~~~~~L~s~~~--~~~~~a~~~L~~~l~~-~~~~~~~~~~~g~i~~L~~l----L-~--------~-~~~~v~~~ 73 (252)
T 4db8_A 11 GSELPQMTQQLNSDDM--QEQLSATRKFSQILSD-GNEQIQAVIDAGALPALVQL----L-S--------S-PNEQILQE 73 (252)
T ss_dssp TCSHHHHHHHHHSSCS--SHHHHHHHHHHHHHHH-HHHHHHHHHHTTHHHHHHHG----G-G--------C-SCHHHHHH
T ss_pred cchHHHHHHHHcCCCH--HHHHHHHHHHHHHHcC-CCchHHHHHHcCcHHHHHHH----H-c--------C-CCHHHHHH
Confidence 4455677888877653 3345567777665554 3345566665 556777663 2 2 1 12567889
Q ss_pred HHHHHHHHHh-cHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCch-HHHHHHHHhhcccccCcChH
Q psy15122 212 CVRCIRAIMN-NTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGH-DKVIKAITMSGELKGKERFQ 289 (927)
Q Consensus 212 ~vkCLkaimN-~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh-~~VL~Al~~~~~~~e~~RF~ 289 (927)
++.||..|.. +......++ ...++..|...+.+.+..++..++..|..+|..+ ... ..+++ . +-..
T Consensus 74 a~~~L~~l~~~~~~~~~~i~-~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~----~------~~i~ 141 (252)
T 4db8_A 74 ALWALSNIASGGNEQIQAVI-DAGALPALVQLLSSPNEQILQEALWALSNIASGG-NEQIQAVID----A------GALP 141 (252)
T ss_dssp HHHHHHHHTTSCHHHHHHHH-HTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC-HHHHHHHHH----T------THHH
T ss_pred HHHHHHHHhcCCHHHHHHHH-HcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCC-chHHHHHHH----C------CCHH
Confidence 9999999997 444444443 4578999999998889999999999999888764 222 22222 1 1123
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy15122 290 PVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDAL 344 (927)
Q Consensus 290 ~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L 344 (927)
.++..| ...+..++..++..+-.|....++. +..+...|....+-.+
T Consensus 142 ~L~~lL--~~~~~~v~~~a~~~L~~l~~~~~~~------~~~~~~~~~i~~L~~l 188 (252)
T 4db8_A 142 ALVQLL--SSPNEQILQEALWALSNIASGGNEQ------IQAVIDAGALPALVQL 188 (252)
T ss_dssp HHHHGG--GCSCHHHHHHHHHHHHHHTTSCHHH------HHHHHHTTCHHHHHHG
T ss_pred HHHHHH--hCCCHHHHHHHHHHHHHHHcCChHH------HHHHHHCCCHHHHHHH
Confidence 455555 3457788888877777776544321 2334456666655544
No 17
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=93.77 E-value=2.4 Score=42.02 Aligned_cols=182 Identities=14% Similarity=0.220 Sum_probs=110.1
Q ss_pred CChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHH
Q psy15122 134 DKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYEC 212 (927)
Q Consensus 134 ~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~ 212 (927)
..+..++..|.+.+. ......+..|...... .-.....++. +|+..|+.+ | . + .+..++..+
T Consensus 12 ~~~~~l~~LL~s~~~--~v~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~L~~l----L-~--------~-~~~~v~~~a 74 (210)
T 4db6_A 12 SELPQMVQQLNSPDQ--QELQSALRKLSQIASG-GNEQIQAVIDAGALPALVQL----L-S--------S-PNEQILQEA 74 (210)
T ss_dssp -CHHHHHHHTTCSCH--HHHHHHHHHHHHHHTS-CHHHHHHHHHTTHHHHHHHH----T-T--------C-SCHHHHHHH
T ss_pred chhHHHHHHhcCCCH--HHHHHHHHHHHHHHcC-CHHHHHHHHHcCCHHHHHHH----H-c--------C-CCHHHHHHH
Confidence 344444555655442 3334556666654433 2244455554 567777663 2 1 1 135678889
Q ss_pred HHHHHHHHh-cHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHH
Q psy15122 213 VRCIRAIMN-NTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPV 291 (927)
Q Consensus 213 vkCLkaimN-~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~l 291 (927)
+.||..|.. +......++ ..+++..|...+.+.++.++..++..|..+|...++... ++... +=+..+
T Consensus 75 ~~~L~~l~~~~~~~~~~i~-~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~----~~~~~------~~i~~L 143 (210)
T 4db6_A 75 LWALSNIASGGNEQIQAVI-DAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ----AVIDA------GALPAL 143 (210)
T ss_dssp HHHHHHHTTSCHHHHHHHH-HTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHH----HHHHT------THHHHH
T ss_pred HHHHHHHhcCCcHHHHHHH-HCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHH----HHHHc------CcHHHH
Confidence 999999984 444445554 457899999999999999999999999988875422222 22221 123355
Q ss_pred HHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChh
Q psy15122 292 VQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASED 351 (927)
Q Consensus 292 v~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~ 351 (927)
+..| ...+..++..++..+..|....++ .+..+...|..+.+..+-...++.
T Consensus 144 ~~ll--~~~~~~v~~~a~~aL~~l~~~~~~------~~~~~~~~g~i~~L~~ll~~~~~~ 195 (210)
T 4db6_A 144 VQLL--SSPNEQILQEALWALSNIASGGNE------QKQAVKEAGALEKLEQLQSHENEK 195 (210)
T ss_dssp HHHT--TCSCHHHHHHHHHHHHHHHTSCHH------HHHHHHHTTHHHHHHHGGGCSCHH
T ss_pred HHHH--cCCCHHHHHHHHHHHHHHHcCCcH------HHHHHHHCCCHHHHHHHHhCCCHH
Confidence 5555 345777887777777777655442 345677888887777665544444
No 18
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=93.61 E-value=2.5 Score=42.79 Aligned_cols=175 Identities=15% Similarity=0.209 Sum_probs=110.2
Q ss_pred HHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHHH
Q psy15122 137 IEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVRC 215 (927)
Q Consensus 137 ~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vkC 215 (927)
..++..|.+++ .......+..|.......+ .....++. +|+..|+.+ | . + .+..++..++.|
T Consensus 5 ~~L~~~L~~~~--~~~~~~a~~~L~~l~~~~~-~~~~~~~~~g~i~~L~~l----l-~--------~-~~~~v~~~a~~~ 67 (252)
T 4hxt_A 5 EKLVKLLTSTD--SETQKEAARDLAEIASGPA-SAIKAIVDAGGVEVLVKL----L-T--------S-TDSEVQKEAARA 67 (252)
T ss_dssp HHHHHHTTCSC--HHHHHHHHHHHHHHHTSCH-HHHHHHHHTTHHHHHHHH----T-T--------C-SCHHHHHHHHHH
T ss_pred HHHHHHHcCCC--HHHHHHHHHHHHHHhcCCc-HHHHHHHHCCCHHHHHHH----H-h--------C-CCHHHHHHHHHH
Confidence 45667776654 3344556777776666544 45555664 567776663 2 2 1 125678899999
Q ss_pred HHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHHHH
Q psy15122 216 IRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQGL 295 (927)
Q Consensus 216 LkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~~L 295 (927)
|..|..........+...+++..|...+.+....++..++..|..+|...+.....+++ . +-+..++..|
T Consensus 68 L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~----~------~~i~~L~~~l 137 (252)
T 4hxt_A 68 LANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVD----A------GGVEVLVKLL 137 (252)
T ss_dssp HHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH----T------THHHHHHHHT
T ss_pred HHHHHcCChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH----C------CCHHHHHHHH
Confidence 99999873333344445678999999998888999999999999999654223333322 1 1133555555
Q ss_pred hccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhh
Q psy15122 296 MVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEK 346 (927)
Q Consensus 296 ~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~ 346 (927)
...+..++..++..+-.|....++. +..+...|....+-.+-.
T Consensus 138 --~~~~~~~~~~a~~~L~~l~~~~~~~------~~~~~~~~~i~~L~~ll~ 180 (252)
T 4hxt_A 138 --TSTDSEVQKEAARALANIASGPDEA------IKAIVDAGGVEVLVKLLT 180 (252)
T ss_dssp --TCSCHHHHHHHHHHHHHHTTSCHHH------HHHHHHTTHHHHHHHHTT
T ss_pred --cCCCHHHHHHHHHHHHHHHcCCHHH------HHHHHHCcCHHHHHHHHC
Confidence 4556788888888887776554432 234555677666655533
No 19
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=92.45 E-value=1.8 Score=51.19 Aligned_cols=221 Identities=11% Similarity=0.174 Sum_probs=137.0
Q ss_pred CHHH-HHHHHHHHHHhCCCChhhhhhhhCC-ChHhHHHHHHHHHhccccccccccCCCChHHHHHHhcCCccchhhhhhh
Q psy15122 79 NPEQ-LNQKFEDMLNDMNLSDEKKEPLRRQ-PLANKKKMLLMHYKGTVTSYENKSKFDKPIEYIQYLSQPELSVNKMYSC 156 (927)
Q Consensus 79 ~~~e-i~~~F~~lle~lnl~~~k~~~L~~~-p~~~K~~li~~~~~~~~~~~~~~~~~~~P~~~i~~L~~~~~~~~~~~~~ 156 (927)
+.+| |+.+...+ .+--+.+|+|..++.+ +..+||.. .-+..+...+|..|+.........-.+
T Consensus 18 s~~etI~~L~~Rl-~~~tl~eDRR~Av~~Lk~~sk~y~~--------------~Vg~~~l~~li~~L~~d~~D~e~v~~~ 82 (651)
T 3grl_A 18 TEAETIQKLCDRV-ASSTLLDDRRNAVRALKSLSKKYRL--------------EVGIQAMEHLIHVLQTDRSDSEIIGYA 82 (651)
T ss_dssp CHHHHHHHHHHHH-HHCCSHHHHHHHHHHHHHTTTTTTT--------------HHHHHTHHHHHHHHHSCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHH-hhccchhHHHHHHHHHHHHHHHhHH--------------HhhhhhHHHHHHHHhcccccHHHHHHH
Confidence 4444 66666666 4455777888887432 22222221 122345667888886654333333345
Q ss_pred HHHHHHHhccCCc---------------hhH-HHHh--hhhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHHHHHH
Q psy15122 157 IESLRIALTNHPL---------------SWV-NEFV--LQDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVRCIRA 218 (927)
Q Consensus 157 l~~Lrv~L~t~~~---------------sWv-~~F~--~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vkCLka 218 (927)
|+.|-..+....- -|. ..|+ .+|+..|++. ++ ..+....+-.|+||.+
T Consensus 83 LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~l-----L~---------~~df~vR~~alqlL~~ 148 (651)
T 3grl_A 83 LDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSL-----LE---------EFDFHVRWPGVKLLTS 148 (651)
T ss_dssp HHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHH-----TT---------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHH-----hc---------CccHHHHHHHHHHHHH
Confidence 6666555554331 233 3555 3688888773 22 1233456779999999
Q ss_pred HHhcHhh--HHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHHHHh
Q psy15122 219 IMNNTVG--LKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQGLM 296 (927)
Q Consensus 219 imN~~~G--l~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~~L~ 296 (927)
|+.+... .+.|+..|.+|..|...|+..+-.++.+++-+|+.++--+ ..+..+..| ..=|..++.-+.
T Consensus 149 L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n-----~~iQklVAF-----EnaFe~Lf~Ii~ 218 (651)
T 3grl_A 149 LLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSN-----GAIQKIVAF-----ENAFERLLDIIT 218 (651)
T ss_dssp HHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTC-----HHHHHHHHH-----TTHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCC-----HHHHHHHHH-----hccHHHHHHHHH
Confidence 9988765 6667889999999999999888889999999998888754 244444444 122666666664
Q ss_pred ccC--CCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy15122 297 VKG--NNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDAL 344 (927)
Q Consensus 297 ~~~--~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L 344 (927)
..+ +--....-|+.+|+.|+..+. .-++-|.+.|...-+..|
T Consensus 219 ~Eg~~~Ggivv~DCL~ll~nLLr~N~------sNQ~~FrEt~~i~~L~~L 262 (651)
T 3grl_A 219 EEGNSDGGIVVEDCLILLQNLLKNNN------SNQNFFKEGSYIQRMKPW 262 (651)
T ss_dssp HHTGGGSHHHHHHHHHHHHHHHTTCH------HHHHHHHHTTCGGGGGGG
T ss_pred hcCCCccchhHHHHHHHHHHHHhcCH------HHHHHHHHcCCHHHHHHH
Confidence 322 234566789999999986643 235566766655544433
No 20
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=91.38 E-value=0.17 Score=57.53 Aligned_cols=14 Identities=14% Similarity=0.299 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHH
Q psy15122 449 AYYKLLEECVSQIV 462 (927)
Q Consensus 449 ~~~~Lid~~v~qiv 462 (927)
.++..+...+..+.
T Consensus 338 ~~~~~~~~~~~~~~ 351 (449)
T 3iot_A 338 AFWYAVRTAVINAA 351 (449)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34555555555444
No 21
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=90.88 E-value=8.7 Score=38.58 Aligned_cols=176 Identities=18% Similarity=0.227 Sum_probs=106.2
Q ss_pred hHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHH
Q psy15122 136 PIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVR 214 (927)
Q Consensus 136 P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vk 214 (927)
...++..|.+++ ......++..|...... .-.....++. +|+..|+.+ + . ..+..++..++.
T Consensus 46 i~~L~~ll~~~~--~~v~~~a~~~L~~l~~~-~~~~~~~~~~~~~i~~l~~l----l-~---------~~~~~v~~~a~~ 108 (252)
T 4hxt_A 46 VEVLVKLLTSTD--SEVQKEAARALANIASG-PDEAIKAIVDAGGVEVLVKL----L-T---------STDSEVQKEAAR 108 (252)
T ss_dssp HHHHHHHTTCSC--HHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHH----T-T---------CSSHHHHHHHHH
T ss_pred HHHHHHHHhCCC--HHHHHHHHHHHHHHHcC-ChHHHHHHHHCCCHHHHHHH----H-c---------CCCHHHHHHHHH
Confidence 445556666554 22333445555544332 2344444554 557776553 2 1 123567888999
Q ss_pred HHHHHH-hcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHH
Q psy15122 215 CIRAIM-NNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQ 293 (927)
Q Consensus 215 CLkaim-N~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~ 293 (927)
+|..|+ .+......++ ...++..|...+.+..+.++..++..|+.+|..++ +. ...+... +=+..++.
T Consensus 109 ~L~~l~~~~~~~~~~~~-~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~-~~---~~~~~~~------~~i~~L~~ 177 (252)
T 4hxt_A 109 ALANIASGPDEAIKAIV-DAGGVEVLVKLLTSTDSEVQKEAARALANIASGPD-EA---IKAIVDA------GGVEVLVK 177 (252)
T ss_dssp HHHHHTTSCHHHHHHHH-HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCH-HH---HHHHHHT------THHHHHHH
T ss_pred HHHHHHcCCHHHHHHHH-HCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCH-HH---HHHHHHC------cCHHHHHH
Confidence 999999 4555555554 45789999999999999999999999999887542 22 1122211 11234555
Q ss_pred HHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhc
Q psy15122 294 GLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKD 347 (927)
Q Consensus 294 ~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~ 347 (927)
.| ...+..++..++..+-.|....++ .+..+...|..+.+-.+-..
T Consensus 178 ll--~~~~~~v~~~a~~~L~~l~~~~~~------~~~~l~~~~~i~~L~~ll~~ 223 (252)
T 4hxt_A 178 LL--TSTDSEVQKEAARALANIASGPTS------AIKAIVDAGGVEVLQKLLTS 223 (252)
T ss_dssp HT--TCSCHHHHHHHHHHHHHHTTSBHH------HHHHHHHTTHHHHHHHGGGC
T ss_pred HH--CCCCHHHHHHHHHHHHHHHcCCHH------HHHHHHHCCCHHHHHHHHCC
Confidence 55 356678888888888777654432 34556667877766655443
No 22
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=90.73 E-value=3.5 Score=47.77 Aligned_cols=137 Identities=16% Similarity=0.169 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHHHHHhc-HhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhccccc
Q psy15122 206 DRVQYECVRCIRAIMNN-TVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKG 284 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~-~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e 284 (927)
..++.++..+|..|+-. ......++ ....+..|...+.+..+.++..+.-.|+.+|.- |...-+..|...
T Consensus 349 ~~i~~~a~~aL~nl~~~~~~~~~~v~-~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~---~~~~~~~~l~~~----- 419 (529)
T 3tpo_A 349 TNIQKEATWTMSNITAGRQDQIQQVV-NHGLVPFLVGVLSKADFKTQKAAAWAITNYTSG---GTVEQIVYLVHC----- 419 (529)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH---SCHHHHHHHHHT-----
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHH-hcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcC---CCHHHHHHHHHC-----
Confidence 45678888888888754 33344444 446788888888888899988887777666653 222222333332
Q ss_pred CcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChhHHH
Q psy15122 285 KERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASEDVSV 354 (927)
Q Consensus 285 ~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~L~~ 354 (927)
+=..+++..| ...+..++..++..|..|+...+.+.-.-.++.-|.++|..+.|+.|..++++++..
T Consensus 420 -g~i~~L~~LL--~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~ 486 (529)
T 3tpo_A 420 -GIIEPLMNLL--SAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYK 486 (529)
T ss_dssp -TCHHHHHHGG--GCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGGGGCSSHHHHH
T ss_pred -cCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHHHcCCCHHHHH
Confidence 2234666666 445677777777777776643332222234556688999999999998888877543
No 23
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=89.86 E-value=6.2 Score=40.05 Aligned_cols=181 Identities=15% Similarity=0.183 Sum_probs=108.4
Q ss_pred ChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHH
Q psy15122 135 KPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECV 213 (927)
Q Consensus 135 ~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~v 213 (927)
....++..|.++. .......+..|......+ -.....++. +|+..|+.+ | . + .+..++..++
T Consensus 55 ~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~L~~l----L-~--------~-~~~~v~~~a~ 117 (252)
T 4db8_A 55 ALPALVQLLSSPN--EQILQEALWALSNIASGG-NEQIQAVIDAGALPALVQL----L-S--------S-PNEQILQEAL 117 (252)
T ss_dssp HHHHHHHGGGCSC--HHHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHG----G-G--------C-SCHHHHHHHH
T ss_pred cHHHHHHHHcCCC--HHHHHHHHHHHHHHhcCC-HHHHHHHHHcCCHHHHHHH----H-c--------C-CCHHHHHHHH
Confidence 3455666776654 233334455555444322 233444554 567777663 2 2 1 2356788899
Q ss_pred HHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHH
Q psy15122 214 RCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQ 293 (927)
Q Consensus 214 kCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~ 293 (927)
.+|..|..+.......+...+++..|...+......++..++..|..+|..++.. ...+... +=...++.
T Consensus 118 ~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~----~~~~~~~------~~i~~L~~ 187 (252)
T 4db8_A 118 WALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQ----IQAVIDA------GALPALVQ 187 (252)
T ss_dssp HHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHH----HHHHHHT------TCHHHHHH
T ss_pred HHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHH----HHHHHHC------CCHHHHHH
Confidence 9999998887666233445578999999998889899999999999888754112 2222221 22345555
Q ss_pred HHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCCh
Q psy15122 294 GLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASE 350 (927)
Q Consensus 294 ~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~ 350 (927)
.| ...+..++..++..+-.|....++ .+..+...|..+.+..+-...++
T Consensus 188 ll--~~~~~~v~~~a~~~L~~l~~~~~~------~~~~~~~~g~i~~L~~ll~~~~~ 236 (252)
T 4db8_A 188 LL--SSPNEQILQEALWALSNIASGGNE------QKQAVKEAGALEKLEQLQSHENE 236 (252)
T ss_dssp GG--GCSSHHHHHHHHHHHHHHTTSCHH------HHHHHHHTTHHHHHHTTTTCSSS
T ss_pred HH--CCCCHHHHHHHHHHHHHHhcCCHH------HHHHHHHCCcHHHHHHHhCCCCH
Confidence 55 344778888777777777644432 23455667777666655333333
No 24
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=89.69 E-value=6 Score=45.56 Aligned_cols=137 Identities=17% Similarity=0.178 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHHHHHhc-HhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhccccc
Q psy15122 206 DRVQYECVRCIRAIMNN-TVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKG 284 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~-~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e 284 (927)
..++.++..+|..|.-+ ......++ ....+..|...+.+..+.++..+.-.|+.+|.. |...-+..|...
T Consensus 330 ~~v~~~A~~aL~nl~a~~~~~~~~v~-~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~---~~~~~~~~L~~~----- 400 (510)
T 3ul1_B 330 TNIQKEATWTMSNITAGRQDQIQQVV-NHGLVPFLVGVLSKADFKTQKEAAWAITNYTSG---GTVEQIVYLVHC----- 400 (510)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHH-HTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH---CCHHHHHHHHHT-----
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHH-hcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcc---CCHHHHHHHHHC-----
Confidence 45678888888888653 43445554 346788888888888899998887777766653 222222333332
Q ss_pred CcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChhHHH
Q psy15122 285 KERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASEDVSV 354 (927)
Q Consensus 285 ~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~L~~ 354 (927)
+=..+++..| ...+..++..++..|..|+...+.+...-.++.-|.++|..+.|+.|..++++++..
T Consensus 401 -g~i~~L~~LL--~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~Lq~~~n~~i~~ 467 (510)
T 3ul1_B 401 -GIIEPLMNLL--SAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYK 467 (510)
T ss_dssp -TCHHHHHHGG--GCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHGGGCSSHHHHH
T ss_pred -CCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHHHcCCCHHHHH
Confidence 2244666655 445677777777777777644333322334566788999999999998888877543
No 25
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=85.76 E-value=11 Score=43.14 Aligned_cols=160 Identities=15% Similarity=0.179 Sum_probs=102.3
Q ss_pred CCChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhhhh-hhhhhhcchhhhcCcCCCCCCCcchhhHHHHH
Q psy15122 133 FDKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVLQD-NKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYE 211 (927)
Q Consensus 133 ~~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~~G-l~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e 211 (927)
..+...++..|.+++ .......+..|+..+...+-.++..++..| +..|+.+ | . +.....++.+
T Consensus 73 ~~~l~~lv~~L~s~~--~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~l----L-~--------~~~~~~v~~~ 137 (528)
T 4b8j_A 73 LESLPAMIGGVYSDD--NNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQF----L-T--------REDFPQLQFE 137 (528)
T ss_dssp --CHHHHHHHHTSSC--HHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHH----H-T--------CTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHH----h-C--------CCCCHHHHHH
Confidence 345677888887654 234456677888777766556777777544 6666552 3 1 2222567889
Q ss_pred HHHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHH
Q psy15122 212 CVRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPV 291 (927)
Q Consensus 212 ~vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~l 291 (927)
++.||..|+.........+-...+|..|...+.+.+..++..++..|+.+|..++.....+++ . +=..++
T Consensus 138 A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~----~------g~l~~L 207 (528)
T 4b8j_A 138 AAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLA----N------GALLPL 207 (528)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHH----T------TCHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHH----C------CcHHHH
Confidence 999999998864434444444578999999998889999999999999998653222222322 1 123355
Q ss_pred HHHHhccCCCHHHHHHHHHHHHHHHcC
Q psy15122 292 VQGLMVKGNNEALRTACLQLINAIVAT 318 (927)
Q Consensus 292 v~~L~~~~~~~~~~~~~m~lIN~Lv~s 318 (927)
+..| ....+..++..+...+..|...
T Consensus 208 l~lL-~~~~~~~v~~~a~~~L~~L~~~ 233 (528)
T 4b8j_A 208 LAQL-NEHTKLSMLRNATWTLSNFCRG 233 (528)
T ss_dssp HHTC-CTTCCHHHHHHHHHHHHHHHCS
T ss_pred HHHH-hcCCCHHHHHHHHHHHHHHHcC
Confidence 5555 3455677777777777666554
No 26
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=85.16 E-value=3.6 Score=48.68 Aligned_cols=165 Identities=16% Similarity=0.167 Sum_probs=107.0
Q ss_pred CCChHHHHHHhc----CCcc-chhhhhhhHHHHHHHhccCCchhHHHHhhhhhhhhhhcchhhhcCcCCCCCCCcchhhH
Q psy15122 133 FDKPIEYIQYLS----QPEL-SVNKMYSCIESLRIALTNHPLSWVNEFVLQDNKNFRKYPIAFLYPRFPSRSRNDSRYDR 207 (927)
Q Consensus 133 ~~~P~~~i~~L~----~~~~-~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~ 207 (927)
..++.+.|..|- +..+ .++. ..+..||-.- -.|=..++..|+..|+++ | + ++..+..
T Consensus 16 ~qs~~etI~~L~~Rl~~~tl~eDRR--~Av~~Lk~~s----k~y~~~Vg~~~l~~li~~----L-~-------~d~~D~e 77 (651)
T 3grl_A 16 QHTEAETIQKLCDRVASSTLLDDRR--NAVRALKSLS----KKYRLEVGIQAMEHLIHV----L-Q-------TDRSDSE 77 (651)
T ss_dssp --CHHHHHHHHHHHHHHCCSHHHHH--HHHHHHHHTT----TTTTTHHHHHTHHHHHHH----H-H-------SCTTCHH
T ss_pred CCChhhHHHHHHHHHhhccchhHHH--HHHHHHHHHH----HHhHHHhhhhhHHHHHHH----H-h-------cccccHH
Confidence 457788887763 2222 3332 3456666543 367777788899988774 3 2 2444555
Q ss_pred HHHHHHHHHHHHHhcHh---------------h---HHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCC-c
Q psy15122 208 VQYECVRCIRAIMNNTV---------------G---LKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPD-G 268 (927)
Q Consensus 208 ~~~e~vkCLkaimN~~~---------------G---l~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~-G 268 (927)
+...++-.|-.+++... | .+.++..++.|..|...|.+..+.++.-++++|.++|.-.+. -
T Consensus 78 ~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~ 157 (651)
T 3grl_A 78 IIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQV 157 (651)
T ss_dssp HHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHH
T ss_pred HHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHH
Confidence 66667777766665421 2 234567888999999999999999999999999999987522 2
Q ss_pred hHHHHHHHHhhcccccCcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHH
Q psy15122 269 HDKVIKAITMSGELKGKERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRL 326 (927)
Q Consensus 269 h~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri 326 (927)
.+.|+.+=.- -..+|..| ++..+.+|...+.+|-.|..+..+++-=+
T Consensus 158 Q~~Il~~p~g---------i~~Lv~lL--~d~rE~iRneallLL~~Lt~~n~~iQklV 204 (651)
T 3grl_A 158 QQIILVSPMG---------VSRLMDLL--ADSREVIRNDGVLLLQALTRSNGAIQKIV 204 (651)
T ss_dssp HHHHHHSTTH---------HHHHHGGG--GCSSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCccc---------HHHHHHHH--hCchHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3334432111 12456555 55678888888888888887777655443
No 27
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=84.63 E-value=4 Score=47.23 Aligned_cols=117 Identities=12% Similarity=0.127 Sum_probs=84.1
Q ss_pred CChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhhh-hhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHH
Q psy15122 134 DKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVLQ-DNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYEC 212 (927)
Q Consensus 134 ~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~~-Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~ 212 (927)
..-+..+..|.+++. ...+.++..+|..|....-.=+..++.. ++..|+.+ | . ......+|.++
T Consensus 76 ~~l~~lv~~l~s~d~--~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~l----L-~--------~~~~~~~q~~A 140 (529)
T 3tpo_A 76 WSVEDIVKGINSNNL--ESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSF----L-G--------KTDCSPIQFES 140 (529)
T ss_dssp CCHHHHHHHHTSSCH--HHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHH----H-T--------CTTCHHHHHHH
T ss_pred HHHHHHHHHhcCCCH--HHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHH----H-c--------CCCCHHHHHHH
Confidence 456778888877653 3556788889888865544445666654 46666553 3 1 12236689999
Q ss_pred HHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccC
Q psy15122 213 VRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIP 265 (927)
Q Consensus 213 vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~ 265 (927)
..||..|+........++-...+|..|...+.+.+..++..++..|+-+|..+
T Consensus 141 a~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~ 193 (529)
T 3tpo_A 141 AWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAG 193 (529)
T ss_dssp HHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccC
Confidence 99999998765555555556688999999999999999999998888888754
No 28
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=84.57 E-value=14 Score=39.50 Aligned_cols=159 Identities=14% Similarity=0.204 Sum_probs=96.6
Q ss_pred hhhHHHHHHHhccCCchhHHHHhh-hhhhhhhh-cchhhhcCcCCCCCCCcchhhHHHHHHHHHHHHHHhcHhhHHHHhc
Q psy15122 154 YSCIESLRIALTNHPLSWVNEFVL-QDNKNFRK-YPIAFLYPRFPSRSRNDSRYDRVQYECVRCIRAIMNNTVGLKQMFG 231 (927)
Q Consensus 154 ~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~-~~l~~ll~~l~~~~~~~~~~~~~~~e~vkCLkaimN~~~Gl~~vl~ 231 (927)
...+..|...+.+ +.|...|+. +|+..|+. + +. ..+..++..++.||..|..+.......+-
T Consensus 58 ~~Al~~L~~lv~~--~dna~~~~~~G~l~~Lv~~l-----L~---------s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv 121 (296)
T 1xqr_A 58 EGALELLADLCEN--MDNAADFCQLSGMHLLVGRY-----LE---------AGAAGLRWRAAQLIGTCSQNVAAIQEQVL 121 (296)
T ss_dssp HHHHHHHHHHHTS--HHHHHHHHHTTHHHHHHHTT-----TT---------CSSHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhC--hhhHHHHHHcCCHHHHHHHH-----Hc---------CCCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 3456666666653 578889985 66766654 3 22 12356778899999988755433444333
Q ss_pred chhHHHHHHHhcCC-CChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHHHHhccCCCHHHHHHHHH
Q psy15122 232 QKEALTIVARSLDP-NKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQGLMVKGNNEALRTACLQ 310 (927)
Q Consensus 232 ~~~~i~~la~sl~~-~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~~~~~~~~m~ 310 (927)
..+++..|...+.+ ....++..++-.|+.+|--.+.+...|++ . .=+.+++..| ...+..++..+..
T Consensus 122 ~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~----~------ggi~~L~~lL--~~~d~~v~~~A~~ 189 (296)
T 1xqr_A 122 GLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLR----L------DGFSVLMRAM--QQQVQKLKVKSAF 189 (296)
T ss_dssp HTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHH----T------THHHHHHHHH--HSSCHHHHHHHHH
T ss_pred HCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHH----C------CCHHHHHHHH--cCCCHHHHHHHHH
Confidence 44788888888764 46777888888888887533223333332 2 1134666666 3356777776666
Q ss_pred HHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhh
Q psy15122 311 LINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEK 346 (927)
Q Consensus 311 lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~ 346 (927)
+|-.|....++ .+..+...|....+-.|-.
T Consensus 190 aLs~L~~~~~~------~~~~vv~~g~i~~Lv~LL~ 219 (296)
T 1xqr_A 190 LLQNLLVGHPE------HKGTLCSMGMVQQLVALVR 219 (296)
T ss_dssp HHHHHHHHCGG------GHHHHHHTTHHHHHHHHHT
T ss_pred HHHHHHhCChH------HHHHHHHcCCHHHHHHHHc
Confidence 66666544332 3445667787776665533
No 29
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=81.23 E-value=30 Score=39.47 Aligned_cols=136 Identities=13% Similarity=0.146 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHHHHhc-HhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhccccc
Q psy15122 206 DRVQYECVRCIRAIMNN-TVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKG 284 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~-~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e 284 (927)
..++.+++.+|..|... ......++. ...+..|...+....+.++..++..|+.+|.. |.......|...
T Consensus 343 ~~v~~~A~~~L~nl~~~~~~~~~~~~~-~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~---~~~~~~~~l~~~----- 413 (528)
T 4b8j_A 343 KSIKKEACWTISNITAGNKDQIQAVIN-AGIIGPLVNLLQTAEFDIKKEAAWAISNATSG---GSHDQIKYLVSE----- 413 (528)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHH-TTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHH---SCHHHHHHHHHT-----
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHH-CCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcC---CCHHHHHHHHHC-----
Confidence 55678888888888753 334445543 36677788777777888888888888888775 222233333222
Q ss_pred CcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHH-----HHHHHHHHhChHHHHHHHhhcCChhHH
Q psy15122 285 KERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRL-----HLRNEIMRVGLYDLLDALEKDASEDVS 353 (927)
Q Consensus 285 ~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri-----~lR~Ef~~~GL~eil~~L~~~~~~~L~ 353 (927)
.-+.+++..| ...+..++..++..|..|+...+...... .....+..+|..+.+..|....++++.
T Consensus 414 -~~i~~L~~lL--~~~d~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~L~~~~~~~v~ 484 (528)
T 4b8j_A 414 -GCIKPLCDLL--ICPDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHDNNEIY 484 (528)
T ss_dssp -TCHHHHHHGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGCSSHHHH
T ss_pred -CCHHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHHHHcCCCHHHH
Confidence 2345666666 44677888888888888865444322211 256677888988888888877776644
No 30
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=81.05 E-value=6.3 Score=45.40 Aligned_cols=118 Identities=12% Similarity=0.108 Sum_probs=80.8
Q ss_pred CCChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhhh-hhhhhhhcchhhhcCcCCCCCCCcchhhHHHHH
Q psy15122 133 FDKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVLQ-DNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYE 211 (927)
Q Consensus 133 ~~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~~-Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e 211 (927)
.-+-+++|..|.+++. ...+++...+|..|....--=++..+.. ++..|+.+ | . ......+|.+
T Consensus 56 ~~~i~~~v~~l~s~d~--~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~l----L-~--------~~~~~~lq~~ 120 (510)
T 3ul1_B 56 NWSVEDIVKGINSNNL--ESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSF----L-G--------KTDCSPIQFE 120 (510)
T ss_dssp SCCHHHHHHHHTSSCH--HHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHH----T-T--------CTTCHHHHHH
T ss_pred hhhHHHHHHHhcCCCH--HHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHH----H-C--------CCCCHHHHHH
Confidence 3467889999988754 3456788888888843222223455544 46666663 2 2 1223568999
Q ss_pred HHHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccC
Q psy15122 212 CVRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIP 265 (927)
Q Consensus 212 ~vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~ 265 (927)
+..||..|.-........+-...+|..|...|.+++..++..++..|.-+|..+
T Consensus 121 Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~ 174 (510)
T 3ul1_B 121 SAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDG 174 (510)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC
Confidence 999999987543334444445578999999999999999999988888887654
No 31
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=80.83 E-value=17 Score=35.54 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHHh-cHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccc
Q psy15122 205 YDRVQYECVRCIRAIMN-NTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELK 283 (927)
Q Consensus 205 ~~~~~~e~vkCLkaimN-~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~ 283 (927)
+..++..++.+|..|+. +......++ ...+|..|...+.+.++.++..++..|+.+|...+.....++ ..
T Consensus 25 ~~~v~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~----~~---- 95 (210)
T 4db6_A 25 DQQELQSALRKLSQIASGGNEQIQAVI-DAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI----DA---- 95 (210)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH----HT----
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHH-HcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHH----HC----
Confidence 35678899999999994 444555554 447899999999988999999999999988865422222222 21
Q ss_pred cCcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy15122 284 GKERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDAL 344 (927)
Q Consensus 284 e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L 344 (927)
+-...++..| ...+..++..+...+..|....++ .+..+...|....+-.+
T Consensus 96 --g~i~~L~~lL--~~~~~~v~~~a~~~L~~l~~~~~~------~~~~~~~~~~i~~L~~l 146 (210)
T 4db6_A 96 --GALPALVQLL--SSPNEQILQEALWALSNIASGGNE------QIQAVIDAGALPALVQL 146 (210)
T ss_dssp --TCHHHHHHHT--TCSCHHHHHHHHHHHHHHTTSCHH------HHHHHHHTTHHHHHHHH
T ss_pred --CCHHHHHHHH--cCCcHHHHHHHHHHHHHHHcCCHH------HHHHHHHcCcHHHHHHH
Confidence 1233555555 344677777777777777544332 12234456666655544
No 32
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=73.78 E-value=35 Score=36.37 Aligned_cols=153 Identities=12% Similarity=0.219 Sum_probs=94.3
Q ss_pred hHHHHH-HhcCCccchhhhhhhHHHHHHHhccCCchhHHH-Hh-hhhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHH
Q psy15122 136 PIEYIQ-YLSQPELSVNKMYSCIESLRIALTNHPLSWVNE-FV-LQDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYEC 212 (927)
Q Consensus 136 P~~~i~-~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~-F~-~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~ 212 (927)
...+|. .|.++... .....+..|.....+++. .++ ++ .+|+..|+.+ | . ......+.-.+
T Consensus 83 l~~Lv~~lL~s~~~~--vr~~Aa~~Lg~ia~~n~~--~~~~vv~~g~l~~Ll~L----L-~--------~~~~~~v~~~A 145 (296)
T 1xqr_A 83 MHLLVGRYLEAGAAG--LRWRAAQLIGTCSQNVAA--IQEQVLGLGALRKLLRL----L-D--------RDACDTVRVKA 145 (296)
T ss_dssp HHHHHHTTTTCSSHH--HHHHHHHHHHHHHTTCHH--HHHHHHHTTHHHHHHHH----H-H--------HCSCHHHHHHH
T ss_pred HHHHHHHHHcCCCHH--HHHHHHHHHHHHHhCCHH--HHHHHHHCCCHHHHHHH----H-c--------cCCCHHHHHHH
Confidence 345677 77765432 223455666665555442 222 33 3678877663 2 1 11124456778
Q ss_pred HHHHHHHH-hcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHH
Q psy15122 213 VRCIRAIM-NNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPV 291 (927)
Q Consensus 213 vkCLkaim-N~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~l 291 (927)
+.+|..|+ ++..+.+.+... +++..|+..+.+..+.++..+.-.|+.+|.-++. ...++... +=..++
T Consensus 146 ~~ALsnl~~~~~~~~~~~~~~-ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~----~~~~vv~~------g~i~~L 214 (296)
T 1xqr_A 146 LFAISCLVREQEAGLLQFLRL-DGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPE----HKGTLCSM------GMVQQL 214 (296)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-THHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG----GHHHHHHT------THHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHC-CCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChH----HHHHHHHc------CCHHHH
Confidence 89999887 456677777653 6899999999888999998888888877764322 22233222 123466
Q ss_pred HHHHhccCCCHHHHHHHHHHHHHHHcC
Q psy15122 292 VQGLMVKGNNEALRTACLQLINAIVAT 318 (927)
Q Consensus 292 v~~L~~~~~~~~~~~~~m~lIN~Lv~s 318 (927)
+..| ...+..++..++..|-.|+..
T Consensus 215 v~LL--~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 215 VALV--RTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHH--TSCCSTHHHHHHHHHHHHHTT
T ss_pred HHHH--cCCChhHHHHHHHHHHHHHhC
Confidence 7666 334567777778888777665
No 33
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=72.52 E-value=32 Score=34.43 Aligned_cols=52 Identities=13% Similarity=0.062 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 747 ITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEEFFTDIKTFKDSFYQAWQENIKLREAE 805 (927)
Q Consensus 747 ~~~L~~~~~~~~~~~~~l~~yfgEd~~~~~~eefF~~~~~F~~~f~~a~~en~~~~e~e 805 (927)
+..|+....+.++.-..+..-|++... =..+.+|+..|+..++....||+++
T Consensus 130 ~~~L~~a~~e~eeeS~~l~~~F~~~~~-------e~dv~~Fl~~y~~~R~~yH~RreK~ 181 (192)
T 2p22_C 130 KKKLEQNTKKLDEESSQLETTTRSIDS-------ADDLDQFIKNYLDIRTQYHLRREKL 181 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSCCCC-------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcc-------cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677777777777777764211 1357899999999998887766544
No 34
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=70.53 E-value=59 Score=37.03 Aligned_cols=136 Identities=11% Similarity=0.131 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHHHh-cHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCch-HHHHHHHHhhcccc
Q psy15122 206 DRVQYECVRCIRAIMN-NTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGH-DKVIKAITMSGELK 283 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN-~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh-~~VL~Al~~~~~~~ 283 (927)
..++.+++.||..|.. +......++ ....+..|...+....+.++..++..|+.+|... ++ ......+...
T Consensus 355 ~~vr~~A~~aL~~l~~~~~~~~~~~~-~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~--~~~~~~~~~l~~~---- 427 (530)
T 1wa5_B 355 ENIKKEACWTISNITAGNTEQIQAVI-DANLIPPLVKLLEVAEYKTKKEACWAISNASSGG--LQRPDIIRYLVSQ---- 427 (530)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHH-HTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT--TTCTHHHHHHHHT----
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHH-HCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHC----
Confidence 5677889999998875 333455554 3456777887777778888888888888887752 11 0122333222
Q ss_pred cCcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHH-----HHHHHHHHHhChHHHHHHHhhcCChhH
Q psy15122 284 GKERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFR-----LHLRNEIMRVGLYDLLDALEKDASEDV 352 (927)
Q Consensus 284 e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~R-----i~lR~Ef~~~GL~eil~~L~~~~~~~L 352 (927)
.-..+++..| ...+..++..++..+..|+...+....+ -.....|..+|..+.+..|....++.+
T Consensus 428 --~~l~~L~~ll--~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~L~~L~~~~~~~v 497 (530)
T 1wa5_B 428 --GCIKPLCDLL--EIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDKI 497 (530)
T ss_dssp --TCHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGGGCSCHHH
T ss_pred --CCHHHHHHHH--hCCCHHHHHHHHHHHHHHHHhhhhhhhcccccccHHHHHHHHcCcHHHHHHHHcCCCHHH
Confidence 2234555555 3457788888888887776544322110 124456778888888888877666654
No 35
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=68.77 E-value=49 Score=36.26 Aligned_cols=132 Identities=13% Similarity=0.090 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHh-cHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhccccc
Q psy15122 206 DRVQYECVRCIRAIMN-NTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKG 284 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN-~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e 284 (927)
..+...++.||..|.. +......++. ...+..|...+....+.++..+...|+.+|... ....+..+...
T Consensus 290 ~~vr~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~---~~~~~~~l~~~----- 360 (450)
T 2jdq_A 290 ESIKKEACWTISNITAGNRAQIQTVID-ANIFPALISILQTAEFRTRKEAAWAITNATSGG---SAEQIKYLVEL----- 360 (450)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHH-TTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHC---CHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHH-CCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCC---CHHHHHHHHHC-----
Confidence 4567889999998885 4445555553 367777777777778888888888888877642 11122222221
Q ss_pred CcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHH-----HHHHHHHHHhChHHHHHHHhhcCC
Q psy15122 285 KERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFR-----LHLRNEIMRVGLYDLLDALEKDAS 349 (927)
Q Consensus 285 ~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~R-----i~lR~Ef~~~GL~eil~~L~~~~~ 349 (927)
.-+..++..| ...+..++..++..|..|+...+....+ -.+...|...|..+.+..|....+
T Consensus 361 -~~i~~L~~ll--~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~ 427 (450)
T 2jdq_A 361 -GCIKPLCDLL--TVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHEN 427 (450)
T ss_dssp -TCHHHHHHGG--GSSCHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHHHCHHH
T ss_pred -CCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcHHHHHHHHcCCC
Confidence 1234555555 3457788888888887776544322110 023455666666666666655333
No 36
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=67.19 E-value=52 Score=37.04 Aligned_cols=177 Identities=14% Similarity=0.057 Sum_probs=92.9
Q ss_pred hhhHHHHHHHhccCCch--hHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHHHHHHHHhcHhhHHHHh
Q psy15122 154 YSCIESLRIALTNHPLS--WVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVRCIRAIMNNTVGLKQMF 230 (927)
Q Consensus 154 ~~~l~~Lrv~L~t~~~s--Wv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vkCLkaimN~~~Gl~~vl 230 (927)
...+..|+....+++-+ |-..++. +|+..|+.+ +. +.....++.+++.+|..|.........++
T Consensus 328 ~~a~~~L~nl~~~~~~~~~~~~~i~~~~~i~~L~~l-----L~--------~~~~~~v~~~a~~~l~nl~~~~~~~~~~~ 394 (529)
T 1jdh_A 328 EPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL-----LH--------PPSHWPLIKATVGLIRNLALCPANHAPLR 394 (529)
T ss_dssp HHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHT-----TS--------TTCCHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHcCChhHHHHH-----hc--------cccchHHHHHHHHHHHHHhcChhhhHHHH
Confidence 44556666554443332 6666664 567776653 21 12223567888999999887665555444
Q ss_pred cchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCc-hH----HHHHHHHhhcc-------cccCcChHHHHHHHhcc
Q psy15122 231 GQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDG-HD----KVIKAITMSGE-------LKGKERFQPVVQGLMVK 298 (927)
Q Consensus 231 ~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~G-h~----~VL~Al~~~~~-------~~e~~RF~~lv~~L~~~ 298 (927)
..+.+..|...+...++.++..+.-.++-.|+.. +| .+ .++.||.+... +.+..-..+++..+ .
T Consensus 395 -~~~~i~~L~~ll~~~~~~v~~~a~~~l~n~~~~~-~~~~~~i~~~~~~al~~L~~~~~~~~~l~~~~~v~~l~~ll--~ 470 (529)
T 1jdh_A 395 -EQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVE-GVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLL--Y 470 (529)
T ss_dssp -HTTHHHHHHHHHHHHHHHHC-----------CBT-TBCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGG--G
T ss_pred -HcCCHHHHHHHHHHHhHHHHHHHhcccCchhhhc-cccHHHHHHHHHHHHHHHhcCchHHHHHhccCCccHHHHHH--c
Confidence 3466777776665555555555443344334443 22 22 23334433321 11223345566555 3
Q ss_pred CCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChhHHH
Q psy15122 299 GNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASEDVSV 354 (927)
Q Consensus 299 ~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~L~~ 354 (927)
..+..++..+...+..|...+ ..+..+...|..+.+..|-...++++..
T Consensus 471 ~~~~~v~~~a~~~l~~l~~~~-------~~~~~i~~~~~~~~L~~l~~~~~~~v~~ 519 (529)
T 1jdh_A 471 SPIENIQRVAAGVLCELAQDK-------EAAEAIEAEGATAPLTELLHSRNEGVAT 519 (529)
T ss_dssp CSCHHHHHHHHHHHHHHTTSH-------HHHHHHHHTTCHHHHHHGGGCSSHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCH-------HHHHHHHHcCChHHHHHHhcCCCHHHHH
Confidence 456666666665555554332 1356677889888888887766666443
No 37
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=65.79 E-value=63 Score=39.18 Aligned_cols=120 Identities=13% Similarity=0.134 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccC
Q psy15122 206 DRVQYECVRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGK 285 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~ 285 (927)
..++..++.||..|+.........+....+|..|...+...+..++..++..|..+|+..+.+...++ ..
T Consensus 248 ~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~----~~------ 317 (780)
T 2z6g_A 248 DSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIIL----AS------ 317 (780)
T ss_dssp HHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHH----TT------
T ss_pred HHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHH----Hc------
Confidence 56789999999999987665666555567899999998888888877788888888764322333222 11
Q ss_pred cChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHH
Q psy15122 286 ERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDA 343 (927)
Q Consensus 286 ~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~ 343 (927)
.=...++..| +.......+..+..++..|-.+.. .|..+...|....+-.
T Consensus 318 ~~i~~Lv~lL-~~~~~~~~~~~a~~aL~~Ls~~~~-------~~~~i~~~g~l~~Ll~ 367 (780)
T 2z6g_A 318 GGPQALVNIM-RTYTYEKLLWTTSRVLKVLSVCSS-------NKPAIVEAGGMQALGL 367 (780)
T ss_dssp THHHHHHHHH-TTCCCHHHHHHHHHHHHHHHTSTT-------HHHHHHHTTHHHHHGG
T ss_pred CCHHHHHHHH-hcCCHHHHHHHHHHHHHHhhcChH-------HHHHHHHhchHHHHHH
Confidence 1133566655 344444454444455544533332 3455666675554443
No 38
>1g70_B RSG-1.2 peptide; peptide-RNA complex, non-canonical base pairs, viral protein/RNA complex; NMR {Human immunodeficiency virus 1} SCOP: j.9.3.1
Probab=65.74 E-value=1.7 Score=27.61 Aligned_cols=10 Identities=70% Similarity=1.092 Sum_probs=8.3
Q ss_pred CCCCcHHHHh
Q psy15122 892 DRPMGAERRA 901 (927)
Q Consensus 892 ~~~~~~~~~~ 901 (927)
.||.|++||.
T Consensus 7 srpsgaerrr 16 (26)
T 1g70_B 7 SRPSGAERRR 16 (26)
T ss_pred CCCchHHHHH
Confidence 7899998774
No 39
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=65.11 E-value=64 Score=36.72 Aligned_cols=158 Identities=13% Similarity=0.177 Sum_probs=95.7
Q ss_pred CChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhhhh-hhhhhhcchhhhcCcCCCCCCCcchhhHHHHHH
Q psy15122 134 DKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVLQD-NKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYEC 212 (927)
Q Consensus 134 ~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~~G-l~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~ 212 (927)
.....++..|.+++. ......+..|+..+....-.-+..++..| +..|+.+ | . +..+..++.++
T Consensus 87 ~~i~~lv~~L~s~~~--~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~----L-~--------~~~~~~v~~~A 151 (530)
T 1wa5_B 87 QELPQMTQQLNSDDM--QEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEF----M-R--------ENQPEMLQLEA 151 (530)
T ss_dssp CCHHHHHHHHSCSSH--HHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHT----T-S--------TTSCHHHHHHH
T ss_pred HHHHHHHHHHcCCCH--HHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHH----h-C--------CCCCHHHHHHH
Confidence 456778888876542 33456677888777643212224445444 5555552 2 1 22245678999
Q ss_pred HHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHH
Q psy15122 213 VRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVV 292 (927)
Q Consensus 213 vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv 292 (927)
+.||..|..........+-..+++..|...+.+..+.++..++..|..+|...+.....++. . +=..+++
T Consensus 152 ~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~----~------~~l~~L~ 221 (530)
T 1wa5_B 152 AWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQ----C------NAMEPIL 221 (530)
T ss_dssp HHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHH----T------TCHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHH----c------CcHHHHH
Confidence 99999998754434444444577888888887788889999999999888653222222221 1 1233455
Q ss_pred HHHhccCCCHHHHHHHHHHHHHHHcC
Q psy15122 293 QGLMVKGNNEALRTACLQLINAIVAT 318 (927)
Q Consensus 293 ~~L~~~~~~~~~~~~~m~lIN~Lv~s 318 (927)
..| . ..+..++..++..+-.|...
T Consensus 222 ~ll-~-~~~~~v~~~a~~~L~~L~~~ 245 (530)
T 1wa5_B 222 GLF-N-SNKPSLIRTATWTLSNLCRG 245 (530)
T ss_dssp HGG-G-SCCHHHHHHHHHHHHHHHCC
T ss_pred HHh-c-cCCHHHHHHHHHHHHHHhCC
Confidence 555 2 36677777777777666544
No 40
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=63.72 E-value=1e+02 Score=36.12 Aligned_cols=174 Identities=12% Similarity=0.107 Sum_probs=95.2
Q ss_pred hHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHH
Q psy15122 136 PIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVR 214 (927)
Q Consensus 136 P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vk 214 (927)
...++..|.+.. +.......+..|+. |...+ .-...++. +++..|+.+ | . + .+..++..++.
T Consensus 58 i~~Lv~~L~~~~-~~~~~~~A~~~L~~-Ls~~~-~~~~~i~~~g~i~~Lv~l----L-~--------~-~~~~v~~~A~~ 120 (644)
T 2z6h_A 58 VSAIVRTMQNTN-DVETARCTAGTLHN-LSHHR-EGLLAIFKSGGIPALVKM----L-G--------S-PVDSVLFYAIT 120 (644)
T ss_dssp HHHHHHHHHSCC-CHHHHHHHHHHHHH-HTTSH-HHHHHHHTTTHHHHHHHH----T-T--------C-SSHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CHHHHHHHHHHHHH-HhcCh-hhHHHHHHcCCHHHHHHH----H-h--------C-CCHHHHHHHHH
Confidence 455666676532 12223345555653 33322 23333343 456666653 2 2 1 13567889999
Q ss_pred HHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHHH
Q psy15122 215 CIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQG 294 (927)
Q Consensus 215 CLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~~ 294 (927)
+|..|+.........+....+|..|...+.+.+......++..|..+|.-.+.+...+.+ . .=...++..
T Consensus 121 aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~----~------g~v~~Lv~l 190 (644)
T 2z6h_A 121 TLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILA----S------GGPQALVNI 190 (644)
T ss_dssp HHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH----T------THHHHHHHH
T ss_pred HHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHH----c------CChHHHHHH
Confidence 999998765445554545678999999998888777777777888887632122222221 1 113355555
Q ss_pred HhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy15122 295 LMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDAL 344 (927)
Q Consensus 295 L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L 344 (927)
| ........+..+...+-.|-.+++ .|..+...|....+-.+
T Consensus 191 L-~~~~~~~~~~~a~~~L~nLs~~~~-------~~~~l~~~g~l~~L~~l 232 (644)
T 2z6h_A 191 M-RTYTYEKLLWTTSRVLKVLSVCSS-------NKPAIVEAGGMQALGLH 232 (644)
T ss_dssp H-TTCCCHHHHHHHHHHHHHHTTCTT-------HHHHHHHTTHHHHHHTT
T ss_pred H-HcCChHHHHHHHHHHHHHHhcCcc-------cHHHHHHCCCHHHHHHH
Confidence 5 333445555445544444433332 25566667755544433
No 41
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=62.65 E-value=75 Score=34.71 Aligned_cols=156 Identities=16% Similarity=0.194 Sum_probs=92.8
Q ss_pred hHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh--hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHH
Q psy15122 136 PIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL--QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECV 213 (927)
Q Consensus 136 P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~--~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~v 213 (927)
...++..|.+++.. .....+..|+..+....-.-+...+. +++..|+.. | . +..+..++..++
T Consensus 22 l~~l~~~l~s~~~~--~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~----L-~--------~~~~~~v~~~a~ 86 (450)
T 2jdq_A 22 TSDMIEMIFSKSPE--QQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEF----L-K--------RKENCTLQFESA 86 (450)
T ss_dssp CHHHHHHHHSSCHH--HHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHH----H-T--------CTTCHHHHHHHH
T ss_pred HHHHHHHhcCCCHH--HHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHH----H-C--------CCCCHHHHHHHH
Confidence 45677778765432 33456777777664211111244454 345555552 2 1 222356788999
Q ss_pred HHHHHHHhcHh-hHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHH
Q psy15122 214 RCIRAIMNNTV-GLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVV 292 (927)
Q Consensus 214 kCLkaimN~~~-Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv 292 (927)
.||..|..... ....++ ..+++..+...+.+.++.++..++..|..+|...+.....+++ . +=...++
T Consensus 87 ~~L~~l~~~~~~~~~~~~-~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~----~------~~i~~L~ 155 (450)
T 2jdq_A 87 WVLTNIASGNSLQTRIVI-QAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLD----C------NILPPLL 155 (450)
T ss_dssp HHHHHHHSSCHHHHHHHH-HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHH----T------TCHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH-hCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHH----C------CCHHHHH
Confidence 99999987432 233333 4578999999998889999999999888888754212222211 1 1233455
Q ss_pred HHHhccCCCHHHHHHHHHHHHHHHcC
Q psy15122 293 QGLMVKGNNEALRTACLQLINAIVAT 318 (927)
Q Consensus 293 ~~L~~~~~~~~~~~~~m~lIN~Lv~s 318 (927)
..| .+..+..++..++..+-.|...
T Consensus 156 ~~l-~~~~~~~v~~~a~~~L~~l~~~ 180 (450)
T 2jdq_A 156 QLF-SKQNRLTMTRNAVWALSNLCRG 180 (450)
T ss_dssp HHT-TSCCCHHHHHHHHHHHHHHHCC
T ss_pred HHh-cCCCCHHHHHHHHHHHHHHhCC
Confidence 555 3446778887777777777543
No 42
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=62.58 E-value=85 Score=35.22 Aligned_cols=174 Identities=11% Similarity=0.075 Sum_probs=96.3
Q ss_pred hHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh-hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHHH
Q psy15122 136 PIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL-QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECVR 214 (927)
Q Consensus 136 P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~-~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~vk 214 (927)
...++..|.++. +..........|+..-.+ -.....++. +|+..|+.+ | . + .+..++..++.
T Consensus 61 i~~Lv~~L~~~~-~~~~~~~a~~~L~~ls~~--~~~~~~i~~~g~i~~L~~l----L-~--------~-~~~~v~~~a~~ 123 (529)
T 1jdh_A 61 VSAIVRTMQNTN-DVETARCTAGTLHNLSHH--REGLLAIFKSGGIPALVKM----L-G--------S-PVDSVLFYAIT 123 (529)
T ss_dssp HHHHHHHHHHCC-CHHHHHHHHHHHHHHTTS--HHHHHHHHHTTHHHHHHHH----T-T--------C-SCHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CHHHHHHHHHHHHHHHcC--chhHHHHHHcCCHHHHHHH----H-c--------C-CCHHHHHHHHH
Confidence 345556665331 112223344555543222 223444443 567777663 2 2 1 23567899999
Q ss_pred HHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHHHH
Q psy15122 215 CIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVVQG 294 (927)
Q Consensus 215 CLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv~~ 294 (927)
+|..|+.........+...+++..|...+.+.+..++..+...|..+|.-.+.+...+.+ . +-...++..
T Consensus 124 ~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~----~------~~i~~L~~l 193 (529)
T 1jdh_A 124 TLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILA----S------GGPQALVNI 193 (529)
T ss_dssp HHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH----T------THHHHHHHH
T ss_pred HHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHH----C------CCHHHHHHH
Confidence 999998875445555555678999999998888888777777887777643122222211 1 113355555
Q ss_pred HhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHH
Q psy15122 295 LMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDAL 344 (927)
Q Consensus 295 L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L 344 (927)
| ........+.++...+-.|-.+++ .|..+...|..+.+-.+
T Consensus 194 l-~~~~~~~~~~~a~~~L~~l~~~~~-------~~~~~~~~g~~~~L~~l 235 (529)
T 1jdh_A 194 M-RTYTYEKLLWTTSRVLKVLSVCSS-------NKPAIVEAGGMQALGLH 235 (529)
T ss_dssp H-HHCCCHHHHHHHHHHHHHHTTSTT-------HHHHHHHTTHHHHHHTT
T ss_pred H-HhCChHHHHHHHHHHHHHHhcCcc-------cHHHHHHCCCHHHHHHH
Confidence 5 344455555555555555543332 24556667765555433
No 43
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=60.99 E-value=3 Score=46.48 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=14.0
Q ss_pred ccchhhhhchhHHHHHHHHHHhcc
Q psy15122 606 QACEEVKQSKKLAKILELILLMGN 629 (927)
Q Consensus 606 ~A~~el~~S~~f~~lL~~IL~iGN 629 (927)
-|++.++.+..+.+-+.+.....+
T Consensus 90 vAiK~~~~~~~~~~E~~~~~~~~~ 113 (400)
T 1nxk_A 90 FALKMLQDCPKARREVELHWRASQ 113 (400)
T ss_dssp EEEEEEECSHHHHHHHHHHHHHTT
T ss_pred EEEEEeCcchhHHHHHHHHHHhcC
Confidence 355556666666666666555543
No 44
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=58.02 E-value=41 Score=36.62 Aligned_cols=56 Identities=13% Similarity=0.173 Sum_probs=30.1
Q ss_pred hHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH------HHHHHcccCCCCCcccchhccHHHHHHHHH
Q psy15122 731 KFLEIMEPFAKEVRQKITLLSNMSKNMMTLYG------DLAEFYTFDKNIYTLEEFFTDIKTFKDSFY 792 (927)
Q Consensus 731 ~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~------~l~~yfgEd~~~~~~eefF~~~~~F~~~f~ 792 (927)
.|......-+......+..+...+..+..-|. ..-.||+ ...+|...|..-+..-.
T Consensus 252 ~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~fF~------~~~~F~~~f~~a~~en~ 313 (340)
T 1v9d_A 252 SFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFM------DLHNFRNMFLQAVKENQ 313 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHH------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 35555555555555666666666666666553 2345664 33455555554444443
No 45
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=57.76 E-value=1.3e+02 Score=33.49 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=19.6
Q ss_pred chhccHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 779 EFFTDIKTFKDSFYQAWQENIKLREAEEKS 808 (927)
Q Consensus 779 efF~~~~~F~~~f~~a~~en~~~~e~eek~ 808 (927)
+.......|..+|.....|..+|+.-+++.
T Consensus 326 ~L~~~Y~~f~~aY~~lL~Ev~RRr~~~~~~ 355 (413)
T 4hpq_C 326 NLLDFYANFERSYHNLLKEVKRRKETAAKL 355 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344567777888888888877755543
No 46
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=49.54 E-value=4 Score=45.51 Aligned_cols=21 Identities=10% Similarity=0.224 Sum_probs=12.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHH
Q psy15122 694 VSTDVIQNSIRQMENNIKNLE 714 (927)
Q Consensus 694 vs~~~l~~~~~~L~~~l~~l~ 714 (927)
++...+..-+.++-.+|.-+-
T Consensus 158 l~~~~~~~i~~qi~~aL~~LH 178 (400)
T 1nxk_A 158 FTEREASEIMKSIGEAIQYLH 178 (400)
T ss_dssp CBHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 455555555566666665554
No 47
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=49.10 E-value=3.7e+02 Score=31.20 Aligned_cols=153 Identities=11% Similarity=0.087 Sum_probs=91.4
Q ss_pred ChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHhh--hhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHH
Q psy15122 135 KPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFVL--QDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYEC 212 (927)
Q Consensus 135 ~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~~--~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~ 212 (927)
.-..++..|.+++.. ....++..|...-.... ....++. +++..|+.. | . +..+...+..+
T Consensus 15 ~i~~Lv~lL~~~~~~--vr~~A~~~L~~La~~~~--~~~~i~~~~~~i~~Lv~~----L-~--------~~~~~~~~~~A 77 (644)
T 2z6h_A 15 AIPELTKLLNDEDQV--VVNKAAVMVHQLSKKEA--SRHAIMRSPQMVSAIVRT----M-Q--------NTNDVETARCT 77 (644)
T ss_dssp THHHHHHHHTCSCHH--HHHHHHHHHHHHHTSTT--HHHHHTTCHHHHHHHHHH----H-H--------SCCCHHHHHHH
T ss_pred hHHHHHHHHcCCCHH--HHHHHHHHHHHHHCCCh--hHHHHHhccChHHHHHHH----H-h--------cCCCHHHHHHH
Confidence 456677777655432 22334555544444332 3333442 446666553 2 1 11234567889
Q ss_pred HHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccCcChHHHH
Q psy15122 213 VRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGKERFQPVV 292 (927)
Q Consensus 213 vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~~RF~~lv 292 (927)
+.+|+.|..+..+...+... .+|..|...+.+....++..++..|..+|...+.....+.++ +-...++
T Consensus 78 ~~~L~~Ls~~~~~~~~i~~~-g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~----------g~i~~Lv 146 (644)
T 2z6h_A 78 AGTLHNLSHHREGLLAIFKS-GGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA----------GGLQKMV 146 (644)
T ss_dssp HHHHHHHTTSHHHHHHHHTT-THHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHT----------THHHHHH
T ss_pred HHHHHHHhcChhhHHHHHHc-CCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHC----------CChHHHH
Confidence 99999998887777776654 889999999998888999999999999987652222222111 1123455
Q ss_pred HHHhccCCCHHHHHHHHHHHHHHHc
Q psy15122 293 QGLMVKGNNEALRTACLQLINAIVA 317 (927)
Q Consensus 293 ~~L~~~~~~~~~~~~~m~lIN~Lv~ 317 (927)
..| ...+..++..+...+-.|..
T Consensus 147 ~lL--~~~~~~~~~~a~~~L~~La~ 169 (644)
T 2z6h_A 147 ALL--NKTNVKFLAITTDCLQILAY 169 (644)
T ss_dssp HGG--GCCCHHHHHHHHHHHHHHHT
T ss_pred HHH--CcCCHHHHHHHHHHHHHHHh
Confidence 555 23456677666655555543
No 48
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=47.44 E-value=1.2e+02 Score=33.94 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=79.3
Q ss_pred ChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHh-hhhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHHHH
Q psy15122 135 KPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFV-LQDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYECV 213 (927)
Q Consensus 135 ~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~-~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e~v 213 (927)
+.+.++..|.+++. .........|+.....++-.|. .++ .+|+..|+.. | . ..+...+..++
T Consensus 3 ~l~~lv~~L~s~~~--~~q~~A~~~L~~l~~~~~~~~~-~i~~~g~i~~Lv~l----L-~---------s~~~~~~~~A~ 65 (457)
T 1xm9_A 3 TIPKAVQYLSSQDE--KYQAIGAYYIQHTCFQDESAKQ-QVYQLGGICKLVDL----L-R---------SPNQNVQQAAA 65 (457)
T ss_dssp CHHHHHHHHHSSCT--HHHHHHHHHHHHHTSSCSSHHH-HHHHTTHHHHHHHH----T-T---------SSCHHHHHHHH
T ss_pred CHHHHHHHHCCCCH--HHHHHHHHHHHHHHcCChHHHH-HHHHcCCHHHHHHH----H-c---------CCCHHHHHHHH
Confidence 34567778877643 2334556666665555444442 333 4677777663 2 2 12345788999
Q ss_pred HHHHHHHhcHhhHHHHhcchhHHHHHHHhcC-CCChhHHHHHHHHhhhhcccCCCchHHHHH
Q psy15122 214 RCIRAIMNNTVGLKQMFGQKEALTIVARSLD-PNKPTVMLEAVKVLAAVCLIPPDGHDKVIK 274 (927)
Q Consensus 214 kCLkaimN~~~Gl~~vl~~~~~i~~la~sl~-~~~~~~~~~vlelLaalc~~~~~Gh~~VL~ 274 (927)
.+|+.|..........+-...+|..|+..|. +....++..+...|..+|.. +.....|++
T Consensus 66 ~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i~~ 126 (457)
T 1xm9_A 66 GALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA 126 (457)
T ss_dssp HHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHHHh
Confidence 9999998652334444445578999999998 78888988999999988877 355555543
No 49
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=47.39 E-value=77 Score=36.00 Aligned_cols=96 Identities=9% Similarity=0.244 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHhhhccCC--CCCcchhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCcccc
Q psy15122 702 SIRQMENNIKNLETDIQNCKQAP--VANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNIYTLEE 779 (927)
Q Consensus 702 ~~~~L~~~l~~l~~~l~~~~~~~--~~~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfgEd~~~~~~ee 779 (927)
++..+...+..+.+.+......- .....| .-..|......=+...+..+..+...+..+..-|-+ .-+
T Consensus 282 s~~~l~~dl~~L~~~l~~v~~~l~~~~~~~~----~~d~f~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~------l~~ 351 (457)
T 3obv_E 282 SAENLQKSLDQMKKQIADVERDVQNFPAATD----EKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKE------LGD 351 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSCCCCSS----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhccCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHH
Confidence 45577777888887776653220 001111 123577777777777888888888888888877742 334
Q ss_pred hhc------cHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 780 FFT------DIKTFKDSFYQAWQENIKLREAEEK 807 (927)
Q Consensus 780 fF~------~~~~F~~~f~~a~~en~~~~e~eek 807 (927)
||+ ...+|...|..-.....+..++-++
T Consensus 352 yFgedp~~~~~~eFF~~~~~F~~~fkkA~~eN~~ 385 (457)
T 3obv_E 352 YFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQK 385 (457)
T ss_dssp HTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554 4567877777777766665554443
No 50
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=41.52 E-value=1.4e+02 Score=26.20 Aligned_cols=72 Identities=14% Similarity=0.247 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCCcch---hHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCC
Q psy15122 700 QNSIRQMENNIKNLETDIQNCKQAPVANEND---KFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDK 772 (927)
Q Consensus 700 ~~~~~~L~~~l~~l~~~l~~~~~~~~~~~~D---~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfgEd~ 772 (927)
+..+..++..|..++.-|.....+....+.| -+...-..|+. -..++..|....+.+++.|..+.+|+-.|.
T Consensus 18 e~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~Fia-LAa~l~~lH~~V~~~Ke~Yl~~rr~~~~d~ 92 (93)
T 3t98_B 18 EVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVA-LAAQLQSIHENVKVLKEQYLSYRKMFLGDA 92 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4555666667777776665433321123333 12222234554 446888999999999999999999986553
No 51
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=41.09 E-value=2e+02 Score=32.73 Aligned_cols=30 Identities=7% Similarity=0.175 Sum_probs=12.6
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 732 FLEIMEPFAKEVRQKITLLSNMSKNMMTLY 761 (927)
Q Consensus 732 f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~ 761 (927)
|......-+......+..+...+..+..-|
T Consensus 336 Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yF 365 (483)
T 2j1d_G 336 FITVASFSFSDVEDLLAEAKDLFTKAVKHF 365 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333334444444444444444444433
No 52
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=38.73 E-value=2.2e+02 Score=34.69 Aligned_cols=123 Identities=11% Similarity=0.182 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccC
Q psy15122 206 DRVQYECVRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGK 285 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~ 285 (927)
..++..++.||..|+.+......+....+.+..|...+++....++..+.-.|+.+|-. +.....++... .
T Consensus 637 ~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~----s~~~~~~ii~~-----~ 707 (810)
T 3now_A 637 LYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSV----SVKCCEKILAI-----A 707 (810)
T ss_dssp TTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH----CHHHHHHHHTS-----T
T ss_pred HHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCC----CHHHHHHHHHH-----c
Confidence 34678899999999998888888775467899999999999999998888788777763 22334444331 1
Q ss_pred cChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHh
Q psy15122 286 ERFQPVVQGLMVKGNNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALE 345 (927)
Q Consensus 286 ~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~ 345 (927)
.=..+++.-| ...+..++..+...|-.|+.+.+ .....+.+.|..+.+..|-
T Consensus 708 g~I~~Lv~LL--~s~d~~vq~~A~~aL~NL~~~s~------e~~~~l~e~G~i~~L~~LL 759 (810)
T 3now_A 708 SWLDILHTLI--ANPSPAVQHRGIVIILNMINAGE------EIAKKLFETDIMELLSGLG 759 (810)
T ss_dssp THHHHHHHHH--TCSSHHHHHHHHHHHHHHHTTCH------HHHHHHHTSTHHHHHTTSC
T ss_pred CCHHHHHHHH--CCCCHHHHHHHHHHHHHHHhCCH------HHHHHHHHCCCHHHHHHHH
Confidence 1133666655 34566666544444444444433 2457778888888887663
No 53
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=36.43 E-value=1.8e+02 Score=29.63 Aligned_cols=123 Identities=7% Similarity=-0.004 Sum_probs=71.7
Q ss_pred CCChHHHHHHhcCCccchhhhhhhHHHHHHHhccCCchhHHHHh-hhhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHH
Q psy15122 133 FDKPIEYIQYLSQPELSVNKMYSCIESLRIALTNHPLSWVNEFV-LQDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYE 211 (927)
Q Consensus 133 ~~~P~~~i~~L~~~~~~~~~~~~~l~~Lrv~L~t~~~sWv~~F~-~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e 211 (927)
..+.+.+|..|.+++............|+..-..++- .-...+ .+|+..|+.. | . . ....+|..
T Consensus 7 ~~~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~-~r~~I~~~G~Ip~LV~l----L-~--------s-~~~~vq~~ 71 (233)
T 3tt9_A 7 EMTLERAVSMLEADHMLPSRISAAATFIQHECFQKSE-ARKRVNQLRGILKLLQL----L-K--------V-QNEDVQRA 71 (233)
T ss_dssp CCCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHH-HHHHHHHTTHHHHHHHG----G-G--------C-CCHHHHHH
T ss_pred hccHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcH-HHHHHHHcCCHHHHHHH----H-c--------C-CCHHHHHH
Confidence 4566788888887654222223333444432222221 112223 4678887773 2 2 1 23567888
Q ss_pred HHHHHHHHHh-cHhhHHHHhcchhHHHHHHHhcC-CCChhHHHHHHHHhhhhcccCCCchHHH
Q psy15122 212 CVRCIRAIMN-NTVGLKQMFGQKEALTIVARSLD-PNKPTVMLEAVKVLAAVCLIPPDGHDKV 272 (927)
Q Consensus 212 ~vkCLkaimN-~~~Gl~~vl~~~~~i~~la~sl~-~~~~~~~~~vlelLaalc~~~~~Gh~~V 272 (927)
.+.+|+.|.- +...-..|. ...+|..|...|. +....++..+.-.|-.++..+ .+...+
T Consensus 72 Aa~aL~nLa~~~~~nk~~I~-~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~-~~k~~i 132 (233)
T 3tt9_A 72 VCGALRNLVFEDNDNKLEVA-ELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSND-KLKNLM 132 (233)
T ss_dssp HHHHHHHHHTTCHHHHHHHH-HTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSG-GGHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHH-HcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCh-hhHHHH
Confidence 9999998875 344444444 4578999998885 567778877776666666654 344433
No 54
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=35.52 E-value=2.6e+02 Score=25.53 Aligned_cols=86 Identities=9% Similarity=0.183 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q psy15122 695 STDVIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLEIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNI 774 (927)
Q Consensus 695 s~~~l~~~~~~L~~~l~~l~~~l~~~~~~~~~~~~D~f~~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfgEd~~~ 774 (927)
+..+|.+.++.|+..+..|... +|.-...-..-.+.|...+.....++..+...+..+-. .
T Consensus 3 ~a~~V~s~l~~LEaeyq~L~~k------------E~qrynqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~----~--- 63 (119)
T 2avr_X 3 DAASLVGELQALDAEYQNLANQ------------EEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQA----E--- 63 (119)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H---
T ss_pred cHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H---
Confidence 3456777777777777776541 12112334556778888888888888888888887754 1
Q ss_pred Ccccchhcc-HHHHHHHHHHHHHHHHH
Q psy15122 775 YTLEEFFTD-IKTFKDSFYQAWQENIK 800 (927)
Q Consensus 775 ~~~eefF~~-~~~F~~~f~~a~~en~~ 800 (927)
....||.. +...+..|+.+.++..+
T Consensus 64 -~~~~~yK~eY~~L~KkYk~~~~~Ld~ 89 (119)
T 2avr_X 64 -ANTRFYKSQYQELASKYEDALKKLEA 89 (119)
T ss_dssp -TTSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -hcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 12234543 56666666666665544
No 55
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=34.76 E-value=2.1e+02 Score=34.47 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccccC
Q psy15122 206 DRVQYECVRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELKGK 285 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~e~ 285 (927)
...+..++.||+.|.....+...+.. ..+|..|+..+.+....++..++..|..+|.........|.++
T Consensus 207 ~~vr~~Aa~aL~~Ls~~~~~~~~i~~-~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~---------- 275 (780)
T 2z6g_A 207 VETARCTSGTLHNLSHHREGLLAIFK-SGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLA---------- 275 (780)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHH-TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHT----------
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHH-cCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHc----------
Confidence 45677889999998887777666554 4789999999988899999999999999998753222222211
Q ss_pred cChHHHHHHHhccCCCHHHHHHHHHHHHHHHc
Q psy15122 286 ERFQPVVQGLMVKGNNEALRTACLQLINAIVA 317 (927)
Q Consensus 286 ~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~ 317 (927)
+-+..++..| ...+..++..++..+..|..
T Consensus 276 g~v~~Lv~lL--~~~~~~v~~~a~~aL~~La~ 305 (780)
T 2z6g_A 276 GGLQKMVALL--NKTNVKFLAITTDCLQILAY 305 (780)
T ss_dssp THHHHHHHGG--GCCCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHH--hcCCHHHHHHHHHHHHHHhc
Confidence 1123455555 23566666666555555543
No 56
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=34.01 E-value=2e+02 Score=29.49 Aligned_cols=93 Identities=6% Similarity=0.097 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHhcHh---hHHHHh--cchhHHHHHH-HhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhh
Q psy15122 206 DRVQYECVRCIRAIMNNTV---GLKQMF--GQKEALTIVA-RSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMS 279 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~~~---Gl~~vl--~~~~~i~~la-~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~ 279 (927)
..++...+.||.+++..-. |..... .....+..|. .++...+..++..+++.|..+|... .....+++.+...
T Consensus 69 ~~v~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~-~~~~~~~e~l~~~ 147 (278)
T 4ffb_C 69 VVAQEQAIVALNSLIDAFASSSLKNAHNITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLD-TSITQSVELVIPF 147 (278)
T ss_dssp HHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTS-SSSHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchhHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHH
Confidence 5567888999998886421 111110 0112344455 4688889999988888766665443 2334555555443
Q ss_pred cccccCcChHHHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy15122 280 GELKGKERFQPVVQGLMVKGNNEALRTACLQLINAIV 316 (927)
Q Consensus 280 ~~~~e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv 316 (927)
....|...+.+|+.+|..++
T Consensus 148 -----------------l~~Knpkv~~~~l~~l~~~l 167 (278)
T 4ffb_C 148 -----------------FEKKLPKLIAAAANCVYELM 167 (278)
T ss_dssp -----------------GGCSCHHHHHHHHHHHHHHH
T ss_pred -----------------HhccCHHHHHHHHHHHHHHH
Confidence 24567888999999997775
No 57
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=29.31 E-value=4.6e+02 Score=26.49 Aligned_cols=100 Identities=15% Similarity=0.221 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHhcHhhHHHHhc-chhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHH-Hhhcccc
Q psy15122 206 DRVQYECVRCIRAIMNNTVGLKQMFG-QKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAI-TMSGELK 283 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~~~Gl~~vl~-~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al-~~~~~~~ 283 (927)
..++-.+..||.+|+.+-.- ..+.. -+..+..|..++.+.++.++..++..|+.++--.......+...+ ..
T Consensus 118 ~~V~~aa~~al~~i~~~~~~-~~~~~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~----- 191 (249)
T 2qk1_A 118 PSVIEAIRKALLTICKYYDP-LASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDE----- 191 (249)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-TCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTT-----
T ss_pred HHHHHHHHHHHHHHHHHccc-cccCCcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHH-----
Confidence 34555667788888775311 00000 113466777889999999999999888766654311112222222 11
Q ss_pred cCcChHHHHHHHhccCCCHHHHHHHHHHHHHHH
Q psy15122 284 GKERFQPVVQGLMVKGNNEALRTACLQLINAIV 316 (927)
Q Consensus 284 e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv 316 (927)
+-+.+..+ ..+.+.++|.+++..+..|.
T Consensus 192 ----iip~l~~~-l~D~~~~VR~aA~~~l~~i~ 219 (249)
T 2qk1_A 192 ----VVPIVIQI-VNDTQPAIRTIGFESFAILI 219 (249)
T ss_dssp ----HHHHHHHH-HTCSSHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHH-hcCCCHHHHHHHHHHHHHHH
Confidence 22333333 25678889999988888874
No 58
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=27.07 E-value=2.7e+02 Score=27.68 Aligned_cols=93 Identities=11% Similarity=0.189 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHHHHhcHh-hHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcccc
Q psy15122 205 YDRVQYECVRCIRAIMNNTV-GLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGELK 283 (927)
Q Consensus 205 ~~~~~~e~vkCLkaimN~~~-Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~~~ 283 (927)
+..+...++.||..|+..-. .+.. -.+..+..|...+...+..++..+.+.|.+++-.. +...++..+
T Consensus 70 ~~~V~~~a~~~l~~la~~l~~~~~~--~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~--~~~~ll~~l------- 138 (242)
T 2qk2_A 70 NVVLVAMAGKCLALLAKGLAKRFSN--YASACVPSLLEKFKEKKPNVVTALREAIDAIYAST--SLEAQQESI------- 138 (242)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGGHH--HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS--CHHHHHHHH-------
T ss_pred CHHHHHHHHHHHHHHHHHHhhhHHH--HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC--CHHHHHHHH-------
Confidence 34566778888888885321 1111 12344667777887788888888887777766532 333333333
Q ss_pred cCcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcC
Q psy15122 284 GKERFQPVVQGLMVKGNNEALRTACLQLINAIVAT 318 (927)
Q Consensus 284 e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s 318 (927)
...| ...+...+..++.+|..++..
T Consensus 139 --------~~~l--~~~~~~vr~~~l~~l~~~l~~ 163 (242)
T 2qk2_A 139 --------VESL--SNKNPSVKSETALFIARALTR 163 (242)
T ss_dssp --------HHHT--TCSCHHHHHHHHHHHHHHHTT
T ss_pred --------HHHH--cCCChHHHHHHHHHHHHHHHH
Confidence 2233 356889999999999998755
No 59
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=26.07 E-value=2.6e+02 Score=33.92 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHhcH-----hhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCch-HHHHHHHHhhcc
Q psy15122 208 VQYECVRCIRAIMNNT-----VGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGH-DKVIKAITMSGE 281 (927)
Q Consensus 208 ~~~e~vkCLkaimN~~-----~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh-~~VL~Al~~~~~ 281 (927)
..++.+++|--|.-.. .....++.+..++..|...+.+.+..++..++++++.++--+ .|- ..+.+ . +
T Consensus 575 ~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~~-e~i~~k~~~----~-~ 648 (778)
T 3opb_A 575 DNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMSHP-LTIAAKFFN----L-E 648 (778)
T ss_dssp HHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHTSG-GGTGGGTSC----C-S
T ss_pred HHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCc-HHHHHHHHh----h-c
Confidence 3678888888777664 224567766689999999888889999999999999888643 231 12211 0 0
Q ss_pred c-ccCcChHHHHHHHhccCCCHHHHHHHHHHHHHH
Q psy15122 282 L-KGKERFQPVVQGLMVKGNNEALRTACLQLINAI 315 (927)
Q Consensus 282 ~-~e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~L 315 (927)
. ....||..+|..+ +..+.+.+.++..++-.+
T Consensus 649 ~~~~~~rL~lLV~Ll--~s~D~~~r~AAagALAnL 681 (778)
T 3opb_A 649 NPQSLRNFNILVKLL--QLSDVESQRAVAAIFANI 681 (778)
T ss_dssp SHHHHHHHHHHHHGG--GCSCHHHHHHHHHHHHHH
T ss_pred CchhhccHHHHHHHH--cCCCHHHHHHHHHHHHHh
Confidence 0 1124688999877 557888887777666554
No 60
>1kil_E Complexin I snare-complex binding region; helix bound to four helix bundle, membrane protein; 2.30A {Rattus norvegicus} SCOP: h.1.15.1
Probab=22.44 E-value=2.2e+02 Score=21.62 Aligned_cols=19 Identities=21% Similarity=0.249 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy15122 807 KSIRVREAREKAENEKKDK 825 (927)
Q Consensus 807 k~rr~~~akekaerek~er 825 (927)
+.|+++-++..++|++...
T Consensus 23 e~Rk~Kh~kmE~eRE~mRq 41 (49)
T 1kil_E 23 EERKAKYAKMEAEREVMRQ 41 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3355566677777776443
No 61
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=22.01 E-value=4.2e+02 Score=30.78 Aligned_cols=117 Identities=17% Similarity=0.196 Sum_probs=54.0
Q ss_pred hhHHHHHHHHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCC----------------Cc
Q psy15122 205 YDRVQYECVRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPP----------------DG 268 (927)
Q Consensus 205 ~~~~~~e~vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~----------------~G 268 (927)
...+.++|++|+-.+-+.. ++.. .++..|...+.+..+.++..++..|..++...+ +.
T Consensus 290 ~~aV~~ea~~~i~~l~~~~-~l~~-----~a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~p~~~~~~~~~i~~~l~d~d 363 (618)
T 1w63_A 290 GNAILYETVLTIMDIKSES-GLRV-----LAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLD 363 (618)
T ss_dssp HHHHHHHHHHHHHHSCCCH-HHHH-----HHHHHHHHHHTCSSTTTHHHHHHHHHHHHHHHHHHHGGGHHHHHHGGGSSC
T ss_pred HHHHHHHHHHHHHhcCCCH-HHHH-----HHHHHHHHHHhCCCCchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCC
Confidence 4567788888887664432 2211 344555555555555555555544433332110 11
Q ss_pred hHHHHHHHHhhcccccCcChHHHHHHHhc--cCCCHHHHHHHHHHHHHHH-cCchhHHHHHH
Q psy15122 269 HDKVIKAITMSGELKGKERFQPVVQGLMV--KGNNEALRTACLQLINAIV-ATPDDLEFRLH 327 (927)
Q Consensus 269 h~~VL~Al~~~~~~~e~~RF~~lv~~L~~--~~~~~~~~~~~m~lIN~Lv-~s~~dl~~Ri~ 327 (927)
...=..|++.........=+..++..|.. ...+.+++..+...|-.+. ..+++....+.
T Consensus 364 ~~Ir~~alelL~~l~~~~nv~~iv~eL~~~l~~~d~e~r~~~v~~I~~la~k~~~~~~~~v~ 425 (618)
T 1w63_A 364 VSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHID 425 (618)
T ss_dssp HHHHHHHHHHHHHHCCSSSTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHSSCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHcccccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCccHHHHHH
Confidence 12212222222212111123444444421 2356777777777776663 34455544443
No 62
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=21.86 E-value=9.3e+02 Score=27.92 Aligned_cols=123 Identities=15% Similarity=0.149 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHhcH----hhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCchHHHHHHHHhhcc
Q psy15122 206 DRVQYECVRCIRAIMNNT----VGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDGHDKVIKAITMSGE 281 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~~----~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~Gh~~VL~Al~~~~~ 281 (927)
..++..++.+|..|+-.. ..+..++....++..|...|.+....++..+...|..+|..+ +...+|++ .
T Consensus 323 ~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~~~~v~~~A~~aL~nLs~~~--~~~~~I~~---g-- 395 (584)
T 3l6x_A 323 PAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDA--RNKELIGK---H-- 395 (584)
T ss_dssp HHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTC--SCHHHHHH---H--
T ss_pred HHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhCCh--hHHHHHHh---C--
Confidence 345556778888887542 234556777788999999999999899888999999888764 23334432 1
Q ss_pred cccCcChHHHHHHHhccC------CCHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhh
Q psy15122 282 LKGKERFQPVVQGLMVKG------NNEALRTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEK 346 (927)
Q Consensus 282 ~~e~~RF~~lv~~L~~~~------~~~~~~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~ 346 (927)
=...+|.-|.... .+.+.+++++..++.|+...+ .-+..+..+|....+-.|-.
T Consensus 396 -----~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~------~~~~~I~~~g~I~~Lv~LL~ 455 (584)
T 3l6x_A 396 -----AIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENL------EAAKKLRETQGIEKLVLINK 455 (584)
T ss_dssp -----HHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCH------HHHHHHHHTTHHHHHHHHHT
T ss_pred -----CHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCCH------HHHHHHHHCCChHHHHHHHh
Confidence 0125666663221 256778877777777765433 12335556777776665533
No 63
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=21.23 E-value=1e+03 Score=28.82 Aligned_cols=125 Identities=11% Similarity=0.072 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHhcHhhHHHHhcchhHHHHHHHhcCCCChhHHHHHHHHhhhhcccCCCc----hHHHHHHHHhhcc
Q psy15122 206 DRVQYECVRCIRAIMNNTVGLKQMFGQKEALTIVARSLDPNKPTVMLEAVKVLAAVCLIPPDG----HDKVIKAITMSGE 281 (927)
Q Consensus 206 ~~~~~e~vkCLkaimN~~~Gl~~vl~~~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~~~G----h~~VL~Al~~~~~ 281 (927)
..++.+++.+|..|.-+......|++ .+++..|...+.+..+..+..+..-|+-+|...... ...+.+++
T Consensus 509 ~~vqe~Aa~aL~NLA~d~~~r~~Vv~-~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aI----- 582 (810)
T 3now_A 509 HNSQELIARVLNAVCGLKELRGKVVQ-EGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVI----- 582 (810)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHH-TTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTH-----
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHH-CCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHH-----
Confidence 56788999999999988776666664 478888888887888888888888888888764211 11122222
Q ss_pred cccCcChHHHHHHHhccCCCHHH-HHHHHHHHHHHHcCchhHHHHHHHHHHHHHhChHHHHHHHhhcCChh
Q psy15122 282 LKGKERFQPVVQGLMVKGNNEAL-RTACLQLINAIVATPDDLEFRLHLRNEIMRVGLYDLLDALEKDASED 351 (927)
Q Consensus 282 ~~e~~RF~~lv~~L~~~~~~~~~-~~~~m~lIN~Lv~s~~dl~~Ri~lR~Ef~~~GL~eil~~L~~~~~~~ 351 (927)
.+++.-| .+..+... ..+++.+-|.. ..+++ .+..+...|..+.+..|-...++.
T Consensus 583 -------ppLv~LL-~~~~~~l~~~eAl~AL~NLa-~~~d~------~~~~Ii~aG~l~~Lv~LL~s~~~~ 638 (810)
T 3now_A 583 -------RPLLNLL-QQDCTALENFESLMALTNLA-SMNES------VRQRIIKEQGVSKIEYYLMEDHLY 638 (810)
T ss_dssp -------HHHHHTT-STTSCHHHHHHHHHHHHHHT-TSCHH------HHHHHHHTTHHHHHHHHHHSCCTT
T ss_pred -------HHHHHHh-CCCCcHHHHHHHHHHHHHHh-cCCHH------HHHHHHHcCCHHHHHHHHcCCCHH
Confidence 3566555 33334333 34666665544 33443 233345566655555554444444
No 64
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=20.77 E-value=2.8e+02 Score=31.89 Aligned_cols=41 Identities=12% Similarity=-0.034 Sum_probs=31.3
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q psy15122 734 EIMEPFAKEVRQKITLLSNMSKNMMTLYGDLAEFYTFDKNI 774 (927)
Q Consensus 734 ~~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l~~yfgEd~~~ 774 (927)
..+...++..+.++..+......+....+.+..-+.++|..
T Consensus 547 ~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~~~~~ 587 (597)
T 3oja_B 547 IALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNRNPDT 587 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 46778888888899999999999999999999999887764
No 65
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=20.55 E-value=4.1e+02 Score=23.18 Aligned_cols=61 Identities=7% Similarity=0.035 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCCCcchhHHH--HHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15122 698 VIQNSIRQMENNIKNLETDIQNCKQAPVANENDKFLE--IMEPFAKEVRQKITLLSNMSKNMMTLYGDL 764 (927)
Q Consensus 698 ~l~~~~~~L~~~l~~l~~~l~~~~~~~~~~~~D~f~~--~m~~F~~~a~~~~~~L~~~~~~~~~~~~~l 764 (927)
......++|...+..+..++... +..|.|.. ++..-++....+++.+...+......|...
T Consensus 20 ~~a~~~~~lk~E~~~lk~E~~st------SaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~~ 82 (93)
T 3sjb_C 20 ELSKKYLAKVKERHELKEFNNSI------SAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAH 82 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTS------CTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHHHHHHHHHHhcc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788888888888888763 45566643 444555666666666666666666666544
No 66
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=20.13 E-value=6.7e+02 Score=25.19 Aligned_cols=149 Identities=17% Similarity=0.255 Sum_probs=76.7
Q ss_pred ChHHHHHHhcCCccchhhhhhhHHHHHH-HhccCCchh--HHHHhhhhhhhhhhcchhhhcCcCCCCCCCcchhhHHHHH
Q psy15122 135 KPIEYIQYLSQPELSVNKMYSCIESLRI-ALTNHPLSW--VNEFVLQDNKNFRKYPIAFLYPRFPSRSRNDSRYDRVQYE 211 (927)
Q Consensus 135 ~P~~~i~~L~~~~~~~~~~~~~l~~Lrv-~L~t~~~sW--v~~F~~~Gl~~Ll~~~l~~ll~~l~~~~~~~~~~~~~~~e 211 (927)
-|.+|-..|.+.+...+ .+.+..|.+ .+.+++--| ..+|. .+++.+...+ ..+....+...
T Consensus 17 l~~~f~~~l~s~~w~eR--k~al~~L~~~~~~~~~~i~~~~~~~~-----~~~~~L~~~l---------~~D~n~~v~~~ 80 (249)
T 2qk1_A 17 LPKDFQERITSSKWKDR--VEALEEFWDSVLSQTKKLKSTSQNYS-----NLLGIYGHII---------QKDANIQAVAL 80 (249)
T ss_dssp SCTTHHHHHTCSSHHHH--HHHHHHHHHHTGGGCCCBCCTTCCCH-----HHHHHHHHHH---------HHCSCHHHHHH
T ss_pred CChhHHHHhhcCCHHHH--HHHHHHHHHHHHhcCCccccCcccHH-----HHHHHHHHHh---------ccCCCHHHHHH
Confidence 34466666766554333 356777888 775544332 22221 1222101111 01122345677
Q ss_pred HHHHHHHHHhcHhhHH-HHhc--c-hhHHHHHHHhcCCCChhHHHHHHHHhhhhcccC-CC---c-hHHHHHHHHhhccc
Q psy15122 212 CVRCIRAIMNNTVGLK-QMFG--Q-KEALTIVARSLDPNKPTVMLEAVKVLAAVCLIP-PD---G-HDKVIKAITMSGEL 282 (927)
Q Consensus 212 ~vkCLkaimN~~~Gl~-~vl~--~-~~~i~~la~sl~~~~~~~~~~vlelLaalc~~~-~~---G-h~~VL~Al~~~~~~ 282 (927)
+++||.+|.+ |+. .-+. + ...+..|...+......++..+...|.++|-.- +. + .+.+++.|
T Consensus 81 A~~al~~la~---~l~~~~f~~~y~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l------ 151 (249)
T 2qk1_A 81 AAQSVELICD---KLKTPGFSKDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDI------ 151 (249)
T ss_dssp HHHHHHHHHH---HHCTTTSCHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHH------
T ss_pred HHHHHHHHHH---hcccccccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHH------
Confidence 8888888874 343 2221 1 123555566666666676655555555555421 00 1 22333333
Q ss_pred ccCcChHHHHHHHhccCCCHHHHHHHHHHHHHHHcCc
Q psy15122 283 KGKERFQPVVQGLMVKGNNEALRTACLQLINAIVATP 319 (927)
Q Consensus 283 ~e~~RF~~lv~~L~~~~~~~~~~~~~m~lIN~Lv~s~ 319 (927)
...| ...++..+.+++.+|..++...
T Consensus 152 ---------~~~l--~~k~~~vk~~al~~l~~~~~~~ 177 (249)
T 2qk1_A 152 ---------LEHM--KHKTPQIRMECTQLFNASMKEE 177 (249)
T ss_dssp ---------HHHT--TCSSHHHHHHHHHHHHHHHHHC
T ss_pred ---------HHHH--cCCChHHHHHHHHHHHHHHHHc
Confidence 2233 3348899999999999998543
Done!