BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15123
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48608|DIA_DROME Protein diaphanous OS=Drosophila melanogaster GN=dia PE=2 SV=2
Length = 1091
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 101/144 (70%), Gaps = 5/144 (3%)
Query: 116 YDLLDA----LEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRN 171
YD LD +E +E++ K+F E +E+D+ EF+QRFDNV +DD DCF+ ++N
Sbjct: 322 YDRLDEFTKIVEASNNENLQQHFKIFNEIREDDFEEFVQRFDNVTFNMDDATDCFDVLKN 381
Query: 172 MVMDSACEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGGCDPDFRSSRRFQ 231
+V D+ EPY LSILQHLL+IRDD Y R AYY+L+EEC+SQIV H+G CDP+F +R F
Sbjct: 382 LVTDTTSEPYFLSILQHLLYIRDDFYFRPAYYQLIEECISQIVFHKGYCDPNF-ENRNFN 440
Query: 232 LDVQPLVEHLAEKSKTEEDRRVED 255
+D L++ + EK+K +E +R E+
Sbjct: 441 IDTSLLLDDIVEKAKAKESKRSEE 464
>sp|O60610|DIAP1_HUMAN Protein diaphanous homolog 1 OS=Homo sapiens GN=DIAPH1 PE=1 SV=2
Length = 1272
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Query: 116 YDLLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMD 175
+ +L L + +ED+ VQL VF E EED Y+ R D++RME+DD N+ F+ + N V D
Sbjct: 344 HQVLQDLREIENEDMRVQLNVFDEQGEEDSYDLKGRLDDIRMEMDDFNEVFQILLNTVKD 403
Query: 176 SACEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGGCDPDFRSSRRFQLDVQ 235
S EP+ LSILQHLL +R+D R YYKL+EEC+SQIVLH+ G DPDF+ R Q++++
Sbjct: 404 SKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECISQIVLHKNGADPDFK-CRHLQIEIE 462
Query: 236 PLVEHLAEKSKTEE 249
L++ + +K+K E+
Sbjct: 463 GLIDQMIDKTKVEK 476
>sp|O08808|DIAP1_MOUSE Protein diaphanous homolog 1 OS=Mus musculus GN=Diaph1 PE=1 SV=1
Length = 1255
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Query: 116 YDLLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMD 175
+ +L L + +ED+ VQL VF E +ED+++ R D++RME+DD + F+ + N V D
Sbjct: 335 HQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDDIRMEMDDFGEVFQIILNTVKD 394
Query: 176 SACEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGGCDPDFRSSRRFQLDVQ 235
S EP+ LSILQHLL +R+D R YYKL+EECVSQIVLH+ G DPDF+ R Q+D++
Sbjct: 395 SKAEPHFLSILQHLLLVRNDYEARPQYYKLIEECVSQIVLHKNGTDPDFK-CRHLQIDIE 453
Query: 236 PLVEHLAEKSKTEE 249
LV+ + +K+K E+
Sbjct: 454 RLVDQMIDKTKVEK 467
>sp|O70566|DIAP2_MOUSE Protein diaphanous homolog 2 OS=Mus musculus GN=Diaph2 PE=1 SV=2
Length = 1098
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 92/133 (69%)
Query: 118 LLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDSA 177
+L L++ +E + +QL+VF E+KE+D E R +++R E+DD+N+ + + NM+ D+A
Sbjct: 360 MLPTLKEIENEGLDIQLRVFEENKEDDLSELSHRLNDIRAEMDDINEVYHLLYNMLKDTA 419
Query: 178 CEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGGCDPDFRSSRRFQLDVQPL 237
EPYLLSILQH L IR+D Y+R YYK++EECVSQIVLH G DPDF+ +R D L
Sbjct: 420 AEPYLLSILQHFLLIRNDYYIRPQYYKIIEECVSQIVLHCSGMDPDFKYRQRIDFDFTHL 479
Query: 238 VEHLAEKSKTEED 250
++ K+K EE+
Sbjct: 480 LDACVNKAKVEEN 492
>sp|O60879|DIAP2_HUMAN Protein diaphanous homolog 2 OS=Homo sapiens GN=DIAPH2 PE=1 SV=1
Length = 1101
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 100/152 (65%), Gaps = 2/152 (1%)
Query: 118 LLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDSA 177
+L L++ ++++ +QLKVF E+KE+D E R +++R E+DD+N+ + + NM+ D+A
Sbjct: 361 MLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIRAEMDDMNEVYHLLYNMLKDTA 420
Query: 178 CEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGGCDPDFRSSRRFQLDVQPL 237
E Y LSILQH L IR+D Y+R YYK++EECVSQIVLH G DPDF+ +R +D+ L
Sbjct: 421 AENYFLSILQHFLLIRNDYYIRPQYYKIIEECVSQIVLHCSGMDPDFKYRQRLDIDLTHL 480
Query: 238 VEHLAEKSKTEEDRRVEDLSAFLFKYGLEFPS 269
++ K+K EE + + F K+ EF +
Sbjct: 481 IDSCVNKAKVEESE--QKAAEFSKKFDEEFTA 510
>sp|Q9Z207|DIAP3_MOUSE Protein diaphanous homolog 3 OS=Mus musculus GN=Diaph3 PE=1 SV=1
Length = 1171
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 91/133 (68%)
Query: 117 DLLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDS 176
++L L+ ++ + +QLKVF EHKEED EF R +++R E+D+ +D + + + V ++
Sbjct: 351 EILPNLKGIKNDGLDIQLKVFDEHKEEDLSEFFHRLEDIRAELDEASDVYSMLWDTVKET 410
Query: 177 ACEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGGCDPDFRSSRRFQLDVQP 236
E + LSILQHLL IR+D+++R Y+KL++ECVSQIVLHR G DPDF +R LD+
Sbjct: 411 RAEGHFLSILQHLLLIRNDRFIREQYFKLIDECVSQIVLHRDGTDPDFTYRKRLDLDLSQ 470
Query: 237 LVEHLAEKSKTEE 249
V+ +++K +E
Sbjct: 471 FVDVCIDQAKLDE 483
>sp|Q9NSV4|DIAP3_HUMAN Protein diaphanous homolog 3 OS=Homo sapiens GN=DIAPH3 PE=1 SV=4
Length = 1193
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 89/133 (66%)
Query: 117 DLLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDS 176
++L L+ ++ + +QLKVF EHKEED +E R +++R E+D+ D + V + V ++
Sbjct: 372 EILPNLKCIKNDGLDIQLKVFDEHKEEDLFELSHRLEDIRAELDEAYDVYNMVWSTVKET 431
Query: 177 ACEPYLLSILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHRGGCDPDFRSSRRFQLDVQP 236
E Y +SILQHLL IR+D ++R Y+KL++ECVSQIVLHR G DPDF +R LD+
Sbjct: 432 RAEGYFISILQHLLLIRNDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQ 491
Query: 237 LVEHLAEKSKTEE 249
V+ +++K EE
Sbjct: 492 FVDICIDQAKLEE 504
>sp|Q9Y4D1|DAAM1_HUMAN Disheveled-associated activator of morphogenesis 1 OS=Homo sapiens
GN=DAAM1 PE=1 SV=2
Length = 1078
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 118 LLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDSA 177
++D L + + + L F + ED EF +RF+ V ++ FE R + S
Sbjct: 316 VIDKLREHENSTLDRHLDFFEMLRNEDELEFAKRFELVHIDTKSATQMFELTRKRLTHSE 375
Query: 178 CEPYLLSILQHLL---FIRDDQYVRLAYYKLLEECVSQIVLHR-GGCDPD 223
P+ +SIL H L + R V+ Y+ LL+ + QIV+ G DPD
Sbjct: 376 AYPHFMSILHHCLQMPYKRSGNTVQ--YWLLLDRIIQQIVIQNDKGQDPD 423
>sp|Q7SXV1|TBC23_DANRE TBC1 domain family member 23 OS=Danio rerio GN=tbc1d23 PE=2 SV=1
Length = 680
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 1 MSIVYIFGCRDQILALKDEPKEKIIEALSLLPCGLERDDVSDFCSLAQYYDYKTPRSFK 59
+ ++ + +D IL + + KE+II+ L P LE +D+ D SLAQYY+ KTP S +
Sbjct: 229 LMLIILVNAKDNILIQEGDNKEEIIKMLEQSPSLLEAEDIEDLFSLAQYYNSKTPLSLR 287
>sp|Q8BPM0|DAAM1_MOUSE Disheveled-associated activator of morphogenesis 1 OS=Mus musculus
GN=Daam1 PE=1 SV=4
Length = 1077
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 118 LLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDSA 177
++D L + + + L F + ED EF +RF+ V ++ FE R + S
Sbjct: 316 VIDKLREHENSTLDRHLDFFEMLRNEDELEFAKRFELVHIDTKSATQMFELTRRRLTHSE 375
Query: 178 CEPYLLSILQHLL---FIRDDQYVRLAYYKLLEECVSQIVLHR-GGCDPD 223
P+ +SIL H L + R V+ Y+ LL+ + QIV+ G DPD
Sbjct: 376 AYPHFMSILHHCLQMPYKRSGNTVQ--YWLLLDRIIQQIVIQNDKGQDPD 423
>sp|P78621|SEPA_EMENI Cytokinesis protein sepA OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sepA PE=3
SV=2
Length = 1790
Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 118 LLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQR-----FDNVRMEIDDVNDCFE---TV 169
LL +E E + Q++ F E++ DY + +QR D++ E+ D+ D + +
Sbjct: 590 LLSKMEGFQYEVIDKQIEHFRENEAIDYEDLLQRESSSTKDSIEGEVKDMTDPLQITDAI 649
Query: 170 RNMVMDSACEPYLLSILQHLLFIRDDQYVR-LAYYKLLEECVSQIVLHRGGCDPDFRSSR 228
+ + + Y LS LQHLL IR++ L Y+L++ +S + + R D D R
Sbjct: 650 ASRLNGTRAHDYFLSALQHLLLIRENSGEDGLRMYQLVDAMLSYVAMDRRLPDLDLRQGL 709
Query: 229 RFQLDVQPLVEHLAEKSKTEEDRRVEDLS 257
F VQ L++ L + E RR D S
Sbjct: 710 TFT--VQSLLDRLHTDA---EARRAYDES 733
>sp|Q8K0F1|TBC23_MOUSE TBC1 domain family member 23 OS=Mus musculus GN=Tbc1d23 PE=2 SV=1
Length = 684
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MSIVYIFGCRDQILALKDEPKEKIIEALSLLPCGLERDDVSDFCSLAQYYDYKTPRSFK 59
+ ++ + ++ ILA + + KE++I L P L +D+ D SLAQYY KTP SF+
Sbjct: 233 LMLIILVNTKEVILAQESDSKEEVIRFLESTPASLNLEDIEDLFSLAQYYCSKTPASFR 291
>sp|Q5R8I6|TBC23_PONAB TBC1 domain family member 23 OS=Pongo abelii GN=TBC1D23 PE=2 SV=1
Length = 684
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 1 MSIVYIFGCRDQILALKDEPKEKIIEALSLLPCGLERDDVSDFCSLAQYYDYKTPRSFK- 59
+ ++ + ++ IL + + KE++I+ L P L +D+ D SLAQYY KTP SF+
Sbjct: 233 LMLIILVNAKEVILTQESDSKEEVIQFLENTPSSLNIEDIEDLFSLAQYYCSKTPASFRK 292
Query: 60 ------TVTLADPEDEDGEIEVDRC 78
TL +D+D ++ C
Sbjct: 293 DNHHLFGSTLLGIKDDDADLSQALC 317
>sp|Q5F415|TBC23_CHICK TBC1 domain family member 23 OS=Gallus gallus GN=TBC1D23 PE=2 SV=1
Length = 679
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MSIVYIFGCRDQILALKDEPKEKIIEALSLLPCGLERDDVSDFCSLAQYYDYKTPRSFK 59
+ ++ + +D ILA + E KE++++ L P LE +D+ D SLAQYY KTP SF+
Sbjct: 227 LMLIILVNAKDVILAQESE-KEEMLKFLETSPANLEVEDIEDLFSLAQYYCSKTPASFR 284
>sp|Q9NUY8|TBC23_HUMAN TBC1 domain family member 23 OS=Homo sapiens GN=TBC1D23 PE=1 SV=3
Length = 699
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 1 MSIVYIFGCRDQILALKDEPKEKIIEALSLLPCGLERDDVSDFCSLAQYYDYKTPRSFK- 59
+ ++ + ++ IL + + KE++I+ L P L +D+ D SLAQYY KTP SF+
Sbjct: 233 LMLIILVNAKEVILTQESDSKEEVIKFLENTPSSLNIEDIEDLFSLAQYYCSKTPASFRK 292
Query: 60 ------TVTLADPEDEDGEIEVDRC 78
TL +D+D ++ C
Sbjct: 293 DNHHLFGSTLLGIKDDDADLSQALC 317
>sp|Q80U19|DAAM2_MOUSE Disheveled-associated activator of morphogenesis 2 OS=Mus musculus
GN=Daam2 PE=2 SV=4
Length = 1115
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 118 LLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDSA 177
++D L + + + L F + ED E +RFD V ++ + FE + + +
Sbjct: 312 VIDKLRQHENAILDKHLDFFEMVRNEDDLELARRFDMVHIDTKSASQMFELIHKKLKHTE 371
Query: 178 CEPYLLSILQHLL---FIRDDQYVRLAYYKLLEECVSQIVLH-RGGCDPDFRSSRRFQLD 233
P LLS+L H L + R+ Y + ++LL+ + QIVL G DPD F +
Sbjct: 372 AYPCLLSVLHHCLQMPYKRNGGYFQ--QWQLLDRILQQIVLQDERGVDPDLAPLENF--N 427
Query: 234 VQPLVEHLAEKSKTEEDR 251
V+ +V L +++ ++ R
Sbjct: 428 VKNIVNMLINENEVKQWR 445
>sp|Q6NRC7|TBC23_XENLA TBC1 domain family member 23 OS=Xenopus laevis GN=tbc1d23 PE=2 SV=1
Length = 682
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 1 MSIVYIFGCRDQILALKDEPKEKIIEALSLLPCGLERDDVSDFCSLAQYYDYKTPRSFK 59
+ ++ + ++ +L + KE++I+ L P LE +D+ D SLAQYY KTP SF+
Sbjct: 218 LMLIMLVNSKETVLGQDMDDKEELIKCLENTPSSLEVEDIEDLFSLAQYYYSKTPASFR 276
>sp|Q5TJ56|FORF_DICDI Formin-F OS=Dictyostelium discoideum GN=forF PE=1 SV=1
Length = 1220
Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 125 DASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDSACEPYLLS 184
+ + D+ Q+ V+ + + D E +RF+++ ++I+D F + D P LL+
Sbjct: 278 EEAPDLLTQIDVYEDEQRADQEELSERFEDLDIDINDPQVIFNEIYKQAKDRLHHP-LLA 336
Query: 185 ILQHLLFIRDDQYVRLAYYKLLEECVSQIVLHR 217
ILQ LL I D V + + L+E+ V QI +++
Sbjct: 337 ILQSLLSISSDTEVGMLSWFLIEKLVLQISVNK 369
>sp|Q86T65|DAAM2_HUMAN Disheveled-associated activator of morphogenesis 2 OS=Homo sapiens
GN=DAAM2 PE=2 SV=3
Length = 1068
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 118 LLDALEKDASEDVSVQLKVFIEHKEEDYYEFIQRFDNVRMEIDDVNDCFETVRNMVMDSA 177
++D L + + + L F + ED E +RFD V ++ + FE + + +
Sbjct: 312 VIDKLRQHENAILDKHLDFFEMVRNEDDLELARRFDMVHIDTKSASQMFELIHKKLKYTE 371
Query: 178 CEPYLLSILQHLL---FIRDDQYVRLAYYKLLEECVSQIVLH-RGGCDPDFRSSRRFQLD 233
P LLS+L H L + R+ Y + ++LL+ + QIVL G DPD F +
Sbjct: 372 AYPCLLSVLHHCLQMPYKRNGGYFQ--QWQLLDRILQQIVLQDERGVDPDLAPLENF--N 427
Query: 234 VQPLVEHLAEKSKTEEDR 251
V+ +V L +++ ++ R
Sbjct: 428 VKNIVNMLINENEVKQWR 445
>sp|Q9CYA6|ZCHC8_MOUSE Zinc finger CCHC domain-containing protein 8 OS=Mus musculus
GN=Zcchc8 PE=2 SV=3
Length = 709
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 64 ADPEDEDGEIEVDRCKYDMKKIIEFPGFNVRPPKG 98
AD E E GEI+ YD+ K++ +PGFN+ P+G
Sbjct: 345 ADGETETGEIQNKNVTYDLSKLVNYPGFNISTPRG 379
>sp|Q5TJ57|FORE_DICDI Formin-E OS=Dictyostelium discoideum GN=forE PE=1 SV=1
Length = 1561
Score = 37.4 bits (85), Expect = 0.12, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 11/121 (9%)
Query: 116 YDLLDALEKDASEDVSV--QLKVFIEHKEEDYYEFIQRFDNVR----MEIDDVNDCFETV 169
Y L ++K + + ++ Q+++F E ED E R ++++ ++IDDV+ F+ +
Sbjct: 817 YTYLREIKKTITHEKTLFTQIEIFEEMMNEDTQELDLRLEDLKRQLGIDIDDVDQVFKAL 876
Query: 170 RNMVMDSACEPYLLSILQHLLFIRD-DQYVRLAYYKLLEECVSQIVLHRGGC-DP---DF 224
+N S LL+ILQ+LL I+ D + Y+ L + V QI LH+GG DP DF
Sbjct: 877 KNTTSKSGLNRQLLNILQNLLVIKACDPTDGVKYFILCDTLVKQISLHKGGFEDPSNFDF 936
Query: 225 R 225
R
Sbjct: 937 R 937
>sp|Q2PE14|ZCHC8_DROME Zinc finger CCHC domain-containing protein 8 homolog OS=Drosophila
melanogaster GN=CG4622 PE=1 SV=2
Length = 553
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 61 VTLADPEDEDGEIEVDRCKYDMKKIIEFPGFNVRP 95
VT +D +E+GE E KYD+ KI+E+PGFNV+P
Sbjct: 289 VTKSD--EEEGESET--FKYDVNKIVEYPGFNVQP 319
>sp|Q6NZY4|ZCHC8_HUMAN Zinc finger CCHC domain-containing protein 8 OS=Homo sapiens
GN=ZCCHC8 PE=1 SV=2
Length = 707
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 64 ADPEDEDGEIEVDRC-KYDMKKIIEFPGFNVRPPKG 98
D E E GEI+ ++ YD+ K++ +PGFN+ P+G
Sbjct: 342 TDGETEVGEIQQNKSVTYDLSKLVNYPGFNISTPRG 377
>sp|Q5R789|ZCHC8_PONAB Zinc finger CCHC domain-containing protein 8 OS=Pongo abelii
GN=ZCCHC8 PE=2 SV=1
Length = 704
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 64 ADPEDEDGEIEVDRC-KYDMKKIIEFPGFNVRPPKG 98
D E E GEI+ ++ YD+ K++ +PGFN+ P+G
Sbjct: 340 TDGETEVGEIQQNKSVTYDLSKLVNYPGFNISTPRG 375
>sp|Q5F3D1|ZCHC8_CHICK Zinc finger CCHC domain-containing protein 8 OS=Gallus gallus
GN=ZCCHC8 PE=2 SV=1
Length = 613
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 65 DPEDED-GEIEVDRCKYDMKKIIEFPGFNVRPPKG 98
D E ED G ++ YD+ K+I +PGFN+ P G
Sbjct: 240 DNETEDEGYLQPKHVTYDVSKLINYPGFNISTPSG 274
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.142 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,226,778
Number of Sequences: 539616
Number of extensions: 4551386
Number of successful extensions: 11038
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 10997
Number of HSP's gapped (non-prelim): 47
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)